Multiple sequence alignment - TraesCS7B01G366600

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G366600 chr7B 100.000 2711 0 0 1 2711 630309696 630312406 0.000000e+00 5007.0
1 TraesCS7B01G366600 chr7B 97.461 709 16 2 2004 2711 742107373 742106666 0.000000e+00 1208.0
2 TraesCS7B01G366600 chr7B 88.206 602 66 4 927 1524 632337675 632337075 0.000000e+00 713.0
3 TraesCS7B01G366600 chr7B 88.641 493 52 3 997 1486 630552405 630552896 5.000000e-167 597.0
4 TraesCS7B01G366600 chr7B 87.447 470 59 0 998 1467 647070537 647070068 2.370000e-150 542.0
5 TraesCS7B01G366600 chr7D 93.407 1092 55 9 488 1575 572756889 572757967 0.000000e+00 1602.0
6 TraesCS7B01G366600 chr7D 86.957 506 64 2 968 1473 580381483 580380980 3.920000e-158 568.0
7 TraesCS7B01G366600 chr7D 88.486 469 53 1 1000 1467 562148731 562148263 1.410000e-157 566.0
8 TraesCS7B01G366600 chr7D 87.298 496 62 1 1003 1497 573460842 573460347 1.410000e-157 566.0
9 TraesCS7B01G366600 chr7D 94.762 210 9 2 1661 1870 572759041 572759248 2.600000e-85 326.0
10 TraesCS7B01G366600 chr7D 96.842 95 3 0 1869 1963 572759288 572759382 2.790000e-35 159.0
11 TraesCS7B01G366600 chr7D 94.737 38 2 0 1967 2004 572759449 572759486 2.920000e-05 60.2
12 TraesCS7B01G366600 chr7A 88.051 544 61 4 927 1467 663498389 663497847 2.280000e-180 641.0
13 TraesCS7B01G366600 chr7A 83.602 683 85 16 1001 1671 662134222 662134889 1.380000e-172 616.0
14 TraesCS7B01G366600 chr3A 91.198 409 34 2 2304 2711 632042096 632041689 3.050000e-154 555.0
15 TraesCS7B01G366600 chr3A 93.770 305 19 0 2004 2308 632070534 632070230 2.460000e-125 459.0
16 TraesCS7B01G366600 chr3B 73.454 388 93 10 2006 2388 795027524 795027142 1.310000e-28 137.0
17 TraesCS7B01G366600 chr3D 72.449 294 69 10 2042 2329 323088773 323088486 1.730000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G366600 chr7B 630309696 630312406 2710 False 5007.0 5007 100.000 1 2711 1 chr7B.!!$F1 2710
1 TraesCS7B01G366600 chr7B 742106666 742107373 707 True 1208.0 1208 97.461 2004 2711 1 chr7B.!!$R3 707
2 TraesCS7B01G366600 chr7B 632337075 632337675 600 True 713.0 713 88.206 927 1524 1 chr7B.!!$R1 597
3 TraesCS7B01G366600 chr7D 580380980 580381483 503 True 568.0 568 86.957 968 1473 1 chr7D.!!$R3 505
4 TraesCS7B01G366600 chr7D 572756889 572759486 2597 False 536.8 1602 94.937 488 2004 4 chr7D.!!$F1 1516
5 TraesCS7B01G366600 chr7A 663497847 663498389 542 True 641.0 641 88.051 927 1467 1 chr7A.!!$R1 540
6 TraesCS7B01G366600 chr7A 662134222 662134889 667 False 616.0 616 83.602 1001 1671 1 chr7A.!!$F1 670

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
123 124 0.036294 GAACCTCCCCCTTCGTCAAG 60.036 60.0 0.0 0.0 0.0 3.02 F
437 438 0.103572 TTGCCGAAGTACCGATAGCC 59.896 55.0 0.0 0.0 0.0 3.93 F
478 479 0.321653 GCCGTCCAGTCCATGTCTTT 60.322 55.0 0.0 0.0 0.0 2.52 F
611 612 0.969149 ACTCCACGCTTCATGACTCA 59.031 50.0 0.0 0.0 0.0 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1586 1596 0.100682 GCACAAGGCAGCATCAGATG 59.899 55.0 5.98 5.98 43.97 2.90 R
1597 1607 0.450983 GAGATCAAGCTGCACAAGGC 59.549 55.0 1.02 0.00 45.13 4.35 R
1686 2715 0.606401 ACGGCAACCTGGAATGACAG 60.606 55.0 0.00 1.07 38.21 3.51 R
2268 3401 0.734942 CATTGCGAGCAAGCCAAAGG 60.735 55.0 15.90 0.00 39.47 3.11 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.984732 GGCCTCCTTGCCCCAACT 61.985 66.667 0.00 0.00 46.11 3.16
19 20 2.612493 GGCCTCCTTGCCCCAACTA 61.612 63.158 0.00 0.00 46.11 2.24
20 21 1.615262 GCCTCCTTGCCCCAACTAT 59.385 57.895 0.00 0.00 0.00 2.12
21 22 0.843984 GCCTCCTTGCCCCAACTATA 59.156 55.000 0.00 0.00 0.00 1.31
22 23 1.425448 GCCTCCTTGCCCCAACTATAT 59.575 52.381 0.00 0.00 0.00 0.86
23 24 2.642807 GCCTCCTTGCCCCAACTATATA 59.357 50.000 0.00 0.00 0.00 0.86
24 25 3.073946 GCCTCCTTGCCCCAACTATATAA 59.926 47.826 0.00 0.00 0.00 0.98
25 26 4.263949 GCCTCCTTGCCCCAACTATATAAT 60.264 45.833 0.00 0.00 0.00 1.28
26 27 5.752030 GCCTCCTTGCCCCAACTATATAATT 60.752 44.000 0.00 0.00 0.00 1.40
27 28 5.946377 CCTCCTTGCCCCAACTATATAATTC 59.054 44.000 0.00 0.00 0.00 2.17
28 29 6.240292 CCTCCTTGCCCCAACTATATAATTCT 60.240 42.308 0.00 0.00 0.00 2.40
29 30 6.779860 TCCTTGCCCCAACTATATAATTCTC 58.220 40.000 0.00 0.00 0.00 2.87
30 31 6.562608 TCCTTGCCCCAACTATATAATTCTCT 59.437 38.462 0.00 0.00 0.00 3.10
31 32 6.881602 CCTTGCCCCAACTATATAATTCTCTC 59.118 42.308 0.00 0.00 0.00 3.20
32 33 6.037786 TGCCCCAACTATATAATTCTCTCG 57.962 41.667 0.00 0.00 0.00 4.04
33 34 4.870991 GCCCCAACTATATAATTCTCTCGC 59.129 45.833 0.00 0.00 0.00 5.03
34 35 5.568825 GCCCCAACTATATAATTCTCTCGCA 60.569 44.000 0.00 0.00 0.00 5.10
35 36 6.102663 CCCCAACTATATAATTCTCTCGCAG 58.897 44.000 0.00 0.00 0.00 5.18
36 37 5.578727 CCCAACTATATAATTCTCTCGCAGC 59.421 44.000 0.00 0.00 0.00 5.25
37 38 5.578727 CCAACTATATAATTCTCTCGCAGCC 59.421 44.000 0.00 0.00 0.00 4.85
38 39 5.331876 ACTATATAATTCTCTCGCAGCCC 57.668 43.478 0.00 0.00 0.00 5.19
39 40 3.618690 ATATAATTCTCTCGCAGCCCC 57.381 47.619 0.00 0.00 0.00 5.80
40 41 0.398318 ATAATTCTCTCGCAGCCCCC 59.602 55.000 0.00 0.00 0.00 5.40
41 42 0.691078 TAATTCTCTCGCAGCCCCCT 60.691 55.000 0.00 0.00 0.00 4.79
42 43 1.977293 AATTCTCTCGCAGCCCCCTC 61.977 60.000 0.00 0.00 0.00 4.30
45 46 4.841617 TCTCGCAGCCCCCTCGAT 62.842 66.667 0.00 0.00 0.00 3.59
46 47 3.854669 CTCGCAGCCCCCTCGATT 61.855 66.667 0.00 0.00 0.00 3.34
47 48 3.798954 CTCGCAGCCCCCTCGATTC 62.799 68.421 0.00 0.00 0.00 2.52
48 49 4.918201 CGCAGCCCCCTCGATTCC 62.918 72.222 0.00 0.00 0.00 3.01
49 50 3.797353 GCAGCCCCCTCGATTCCA 61.797 66.667 0.00 0.00 0.00 3.53
50 51 2.998097 CAGCCCCCTCGATTCCAA 59.002 61.111 0.00 0.00 0.00 3.53
51 52 1.533711 CAGCCCCCTCGATTCCAAT 59.466 57.895 0.00 0.00 0.00 3.16
52 53 0.536006 CAGCCCCCTCGATTCCAATC 60.536 60.000 0.00 0.00 0.00 2.67
66 67 4.630894 TTCCAATCGAAAAATCCATCCG 57.369 40.909 0.00 0.00 0.00 4.18
67 68 2.357637 TCCAATCGAAAAATCCATCCGC 59.642 45.455 0.00 0.00 0.00 5.54
68 69 2.098934 CCAATCGAAAAATCCATCCGCA 59.901 45.455 0.00 0.00 0.00 5.69
69 70 3.365832 CAATCGAAAAATCCATCCGCAG 58.634 45.455 0.00 0.00 0.00 5.18
70 71 2.394930 TCGAAAAATCCATCCGCAGA 57.605 45.000 0.00 0.00 0.00 4.26
71 72 2.705730 TCGAAAAATCCATCCGCAGAA 58.294 42.857 0.00 0.00 0.00 3.02
72 73 2.418628 TCGAAAAATCCATCCGCAGAAC 59.581 45.455 0.00 0.00 0.00 3.01
73 74 2.161410 CGAAAAATCCATCCGCAGAACA 59.839 45.455 0.00 0.00 0.00 3.18
74 75 3.728864 CGAAAAATCCATCCGCAGAACAG 60.729 47.826 0.00 0.00 0.00 3.16
75 76 1.755179 AAATCCATCCGCAGAACAGG 58.245 50.000 0.00 0.00 0.00 4.00
76 77 0.749454 AATCCATCCGCAGAACAGGC 60.749 55.000 0.00 0.00 0.00 4.85
83 84 4.427394 GCAGAACAGGCGATCGAT 57.573 55.556 21.57 0.00 0.00 3.59
84 85 2.220761 GCAGAACAGGCGATCGATC 58.779 57.895 21.57 15.68 0.00 3.69
85 86 0.249238 GCAGAACAGGCGATCGATCT 60.249 55.000 21.57 12.44 0.00 2.75
86 87 1.804372 GCAGAACAGGCGATCGATCTT 60.804 52.381 21.57 9.97 0.00 2.40
87 88 2.544685 CAGAACAGGCGATCGATCTTT 58.455 47.619 21.57 5.71 0.00 2.52
88 89 3.706698 CAGAACAGGCGATCGATCTTTA 58.293 45.455 21.57 0.00 0.00 1.85
89 90 3.733224 CAGAACAGGCGATCGATCTTTAG 59.267 47.826 21.57 12.36 0.00 1.85
90 91 2.141535 ACAGGCGATCGATCTTTAGC 57.858 50.000 21.57 17.29 0.00 3.09
91 92 1.683917 ACAGGCGATCGATCTTTAGCT 59.316 47.619 21.57 6.52 0.00 3.32
92 93 2.057316 CAGGCGATCGATCTTTAGCTG 58.943 52.381 21.57 13.42 0.00 4.24
93 94 1.683917 AGGCGATCGATCTTTAGCTGT 59.316 47.619 21.57 7.91 0.00 4.40
94 95 2.101582 AGGCGATCGATCTTTAGCTGTT 59.898 45.455 21.57 6.62 0.00 3.16
95 96 2.219674 GGCGATCGATCTTTAGCTGTTG 59.780 50.000 21.57 4.73 0.00 3.33
96 97 2.348032 GCGATCGATCTTTAGCTGTTGC 60.348 50.000 21.57 10.75 40.05 4.17
97 98 2.097685 CGATCGATCTTTAGCTGTTGCG 60.098 50.000 22.43 2.02 45.42 4.85
98 99 2.647529 TCGATCTTTAGCTGTTGCGA 57.352 45.000 0.00 0.00 45.42 5.10
99 100 2.530177 TCGATCTTTAGCTGTTGCGAG 58.470 47.619 0.00 0.00 45.42 5.03
100 101 2.094700 TCGATCTTTAGCTGTTGCGAGT 60.095 45.455 0.00 0.00 45.42 4.18
101 102 2.280183 CGATCTTTAGCTGTTGCGAGTC 59.720 50.000 0.00 0.00 45.42 3.36
102 103 1.698165 TCTTTAGCTGTTGCGAGTCG 58.302 50.000 8.54 8.54 45.42 4.18
113 114 4.493747 CGAGTCGCGAACCTCCCC 62.494 72.222 12.06 0.00 44.57 4.81
114 115 4.144703 GAGTCGCGAACCTCCCCC 62.145 72.222 12.06 0.00 0.00 5.40
115 116 4.698625 AGTCGCGAACCTCCCCCT 62.699 66.667 12.06 0.00 0.00 4.79
116 117 3.703127 GTCGCGAACCTCCCCCTT 61.703 66.667 12.06 0.00 0.00 3.95
117 118 3.387947 TCGCGAACCTCCCCCTTC 61.388 66.667 6.20 0.00 0.00 3.46
118 119 4.814294 CGCGAACCTCCCCCTTCG 62.814 72.222 0.00 0.00 41.78 3.79
119 120 3.703127 GCGAACCTCCCCCTTCGT 61.703 66.667 0.00 0.00 41.10 3.85
120 121 2.577593 CGAACCTCCCCCTTCGTC 59.422 66.667 0.00 0.00 35.59 4.20
121 122 2.280552 CGAACCTCCCCCTTCGTCA 61.281 63.158 0.00 0.00 35.59 4.35
122 123 1.823169 CGAACCTCCCCCTTCGTCAA 61.823 60.000 0.00 0.00 35.59 3.18
123 124 0.036294 GAACCTCCCCCTTCGTCAAG 60.036 60.000 0.00 0.00 0.00 3.02
131 132 2.006772 CCTTCGTCAAGGTATGCGC 58.993 57.895 0.00 0.00 44.11 6.09
132 133 1.429148 CCTTCGTCAAGGTATGCGCC 61.429 60.000 4.18 0.00 44.11 6.53
133 134 1.429148 CTTCGTCAAGGTATGCGCCC 61.429 60.000 4.18 0.00 0.00 6.13
134 135 3.261951 CGTCAAGGTATGCGCCCG 61.262 66.667 4.18 0.00 0.00 6.13
135 136 3.573491 GTCAAGGTATGCGCCCGC 61.573 66.667 4.18 5.60 42.35 6.13
136 137 3.781307 TCAAGGTATGCGCCCGCT 61.781 61.111 14.13 2.42 42.51 5.52
137 138 2.108157 CAAGGTATGCGCCCGCTA 59.892 61.111 14.13 1.00 42.51 4.26
138 139 1.301716 CAAGGTATGCGCCCGCTAT 60.302 57.895 14.13 8.22 42.51 2.97
139 140 1.004918 AAGGTATGCGCCCGCTATC 60.005 57.895 14.13 4.59 42.51 2.08
140 141 2.765250 AAGGTATGCGCCCGCTATCG 62.765 60.000 14.13 0.00 42.51 2.92
151 152 2.973420 CGCTATCGGTTCCCTGTTC 58.027 57.895 0.00 0.00 0.00 3.18
152 153 0.529992 CGCTATCGGTTCCCTGTTCC 60.530 60.000 0.00 0.00 0.00 3.62
153 154 0.179054 GCTATCGGTTCCCTGTTCCC 60.179 60.000 0.00 0.00 0.00 3.97
154 155 0.468648 CTATCGGTTCCCTGTTCCCC 59.531 60.000 0.00 0.00 0.00 4.81
155 156 0.252789 TATCGGTTCCCTGTTCCCCA 60.253 55.000 0.00 0.00 0.00 4.96
156 157 1.137594 ATCGGTTCCCTGTTCCCCAA 61.138 55.000 0.00 0.00 0.00 4.12
157 158 1.303317 CGGTTCCCTGTTCCCCAAG 60.303 63.158 0.00 0.00 0.00 3.61
158 159 1.606601 GGTTCCCTGTTCCCCAAGC 60.607 63.158 0.00 0.00 0.00 4.01
159 160 1.606601 GTTCCCTGTTCCCCAAGCC 60.607 63.158 0.00 0.00 0.00 4.35
160 161 3.204467 TTCCCTGTTCCCCAAGCCG 62.204 63.158 0.00 0.00 0.00 5.52
161 162 4.740822 CCCTGTTCCCCAAGCCGG 62.741 72.222 0.00 0.00 0.00 6.13
163 164 4.351054 CTGTTCCCCAAGCCGGCT 62.351 66.667 27.08 27.08 0.00 5.52
164 165 4.659172 TGTTCCCCAAGCCGGCTG 62.659 66.667 33.60 23.19 0.00 4.85
165 166 4.660938 GTTCCCCAAGCCGGCTGT 62.661 66.667 33.60 17.70 0.00 4.40
166 167 3.897122 TTCCCCAAGCCGGCTGTT 61.897 61.111 33.60 13.55 0.00 3.16
167 168 3.860930 TTCCCCAAGCCGGCTGTTC 62.861 63.158 33.60 0.00 0.00 3.18
168 169 4.659172 CCCCAAGCCGGCTGTTCA 62.659 66.667 33.60 0.00 0.00 3.18
169 170 2.361610 CCCAAGCCGGCTGTTCAT 60.362 61.111 33.60 11.64 0.00 2.57
170 171 2.703798 CCCAAGCCGGCTGTTCATG 61.704 63.158 33.60 23.86 0.00 3.07
171 172 2.180017 CAAGCCGGCTGTTCATGC 59.820 61.111 33.60 0.00 0.00 4.06
172 173 3.064324 AAGCCGGCTGTTCATGCC 61.064 61.111 33.60 0.00 46.42 4.40
177 178 3.181367 GGCTGTTCATGCCGTGAG 58.819 61.111 0.00 0.00 41.03 3.51
178 179 1.375908 GGCTGTTCATGCCGTGAGA 60.376 57.895 0.00 0.00 41.03 3.27
179 180 0.745845 GGCTGTTCATGCCGTGAGAT 60.746 55.000 0.00 0.00 41.03 2.75
180 181 1.089920 GCTGTTCATGCCGTGAGATT 58.910 50.000 0.00 0.00 38.29 2.40
181 182 1.202110 GCTGTTCATGCCGTGAGATTG 60.202 52.381 0.00 0.00 38.29 2.67
182 183 1.399440 CTGTTCATGCCGTGAGATTGG 59.601 52.381 0.00 0.00 38.29 3.16
183 184 1.271325 TGTTCATGCCGTGAGATTGGT 60.271 47.619 0.00 0.00 38.29 3.67
184 185 1.398390 GTTCATGCCGTGAGATTGGTC 59.602 52.381 0.00 0.00 38.29 4.02
185 186 0.904649 TCATGCCGTGAGATTGGTCT 59.095 50.000 0.00 0.00 37.42 3.85
186 187 2.107366 TCATGCCGTGAGATTGGTCTA 58.893 47.619 0.00 0.00 33.97 2.59
187 188 2.101415 TCATGCCGTGAGATTGGTCTAG 59.899 50.000 0.00 0.00 33.97 2.43
188 189 1.847328 TGCCGTGAGATTGGTCTAGA 58.153 50.000 0.00 0.00 33.97 2.43
189 190 2.388735 TGCCGTGAGATTGGTCTAGAT 58.611 47.619 0.00 0.00 33.97 1.98
190 191 2.362397 TGCCGTGAGATTGGTCTAGATC 59.638 50.000 0.00 0.00 33.97 2.75
191 192 2.625790 GCCGTGAGATTGGTCTAGATCT 59.374 50.000 4.28 0.00 33.97 2.75
192 193 3.551863 GCCGTGAGATTGGTCTAGATCTG 60.552 52.174 5.18 0.00 33.97 2.90
193 194 3.551863 CCGTGAGATTGGTCTAGATCTGC 60.552 52.174 5.18 0.00 33.97 4.26
194 195 3.067320 CGTGAGATTGGTCTAGATCTGCA 59.933 47.826 5.18 0.00 33.97 4.41
195 196 4.619973 GTGAGATTGGTCTAGATCTGCAG 58.380 47.826 7.63 7.63 33.97 4.41
196 197 4.099266 GTGAGATTGGTCTAGATCTGCAGT 59.901 45.833 14.67 0.42 33.97 4.40
197 198 4.713814 TGAGATTGGTCTAGATCTGCAGTT 59.286 41.667 14.67 5.03 33.97 3.16
198 199 5.188555 TGAGATTGGTCTAGATCTGCAGTTT 59.811 40.000 14.67 2.24 33.97 2.66
199 200 5.669477 AGATTGGTCTAGATCTGCAGTTTC 58.331 41.667 14.67 12.06 31.65 2.78
200 201 5.424895 AGATTGGTCTAGATCTGCAGTTTCT 59.575 40.000 14.67 18.30 31.65 2.52
201 202 4.462508 TGGTCTAGATCTGCAGTTTCTG 57.537 45.455 23.44 16.17 34.12 3.02
202 203 3.834813 TGGTCTAGATCTGCAGTTTCTGT 59.165 43.478 23.44 8.50 33.43 3.41
203 204 5.016831 TGGTCTAGATCTGCAGTTTCTGTA 58.983 41.667 23.44 13.23 33.43 2.74
204 205 5.126222 TGGTCTAGATCTGCAGTTTCTGTAG 59.874 44.000 23.44 16.75 43.73 2.74
211 212 5.929697 TCTGCAGTTTCTGTAGATTTGTG 57.070 39.130 14.67 0.00 45.43 3.33
212 213 5.368145 TCTGCAGTTTCTGTAGATTTGTGT 58.632 37.500 14.67 0.00 45.43 3.72
213 214 6.521162 TCTGCAGTTTCTGTAGATTTGTGTA 58.479 36.000 14.67 0.00 45.43 2.90
214 215 6.646653 TCTGCAGTTTCTGTAGATTTGTGTAG 59.353 38.462 14.67 0.00 45.43 2.74
215 216 6.521162 TGCAGTTTCTGTAGATTTGTGTAGA 58.479 36.000 0.00 0.00 33.43 2.59
216 217 7.161404 TGCAGTTTCTGTAGATTTGTGTAGAT 58.839 34.615 0.00 0.00 33.43 1.98
217 218 7.331934 TGCAGTTTCTGTAGATTTGTGTAGATC 59.668 37.037 0.00 0.00 33.43 2.75
218 219 7.463383 GCAGTTTCTGTAGATTTGTGTAGATCG 60.463 40.741 0.00 0.00 33.43 3.69
219 220 7.755373 CAGTTTCTGTAGATTTGTGTAGATCGA 59.245 37.037 0.00 0.00 0.00 3.59
220 221 8.470805 AGTTTCTGTAGATTTGTGTAGATCGAT 58.529 33.333 0.00 0.00 0.00 3.59
221 222 9.088512 GTTTCTGTAGATTTGTGTAGATCGATT 57.911 33.333 0.00 0.00 0.00 3.34
238 239 7.906160 AGATCGATTAATTTGTTTGTAGACCG 58.094 34.615 0.00 0.00 0.00 4.79
239 240 6.411630 TCGATTAATTTGTTTGTAGACCGG 57.588 37.500 0.00 0.00 0.00 5.28
240 241 5.933463 TCGATTAATTTGTTTGTAGACCGGT 59.067 36.000 6.92 6.92 0.00 5.28
241 242 6.019152 CGATTAATTTGTTTGTAGACCGGTG 58.981 40.000 14.63 0.00 0.00 4.94
242 243 5.692613 TTAATTTGTTTGTAGACCGGTGG 57.307 39.130 14.63 0.00 0.00 4.61
243 244 3.495434 ATTTGTTTGTAGACCGGTGGA 57.505 42.857 14.63 0.00 0.00 4.02
244 245 3.495434 TTTGTTTGTAGACCGGTGGAT 57.505 42.857 14.63 0.00 0.00 3.41
245 246 3.495434 TTGTTTGTAGACCGGTGGATT 57.505 42.857 14.63 0.00 0.00 3.01
246 247 3.495434 TGTTTGTAGACCGGTGGATTT 57.505 42.857 14.63 0.00 0.00 2.17
247 248 4.620589 TGTTTGTAGACCGGTGGATTTA 57.379 40.909 14.63 0.00 0.00 1.40
248 249 4.317488 TGTTTGTAGACCGGTGGATTTAC 58.683 43.478 14.63 7.32 0.00 2.01
249 250 4.202336 TGTTTGTAGACCGGTGGATTTACA 60.202 41.667 14.63 9.96 0.00 2.41
250 251 4.620589 TTGTAGACCGGTGGATTTACAA 57.379 40.909 14.63 15.25 30.70 2.41
251 252 4.620589 TGTAGACCGGTGGATTTACAAA 57.379 40.909 14.63 0.00 0.00 2.83
252 253 4.571919 TGTAGACCGGTGGATTTACAAAG 58.428 43.478 14.63 0.00 0.00 2.77
253 254 4.283978 TGTAGACCGGTGGATTTACAAAGA 59.716 41.667 14.63 0.00 0.00 2.52
254 255 4.569719 AGACCGGTGGATTTACAAAGAT 57.430 40.909 14.63 0.00 0.00 2.40
255 256 4.514401 AGACCGGTGGATTTACAAAGATC 58.486 43.478 14.63 0.00 0.00 2.75
256 257 3.267483 ACCGGTGGATTTACAAAGATCG 58.733 45.455 6.12 0.00 0.00 3.69
257 258 3.055675 ACCGGTGGATTTACAAAGATCGA 60.056 43.478 6.12 0.00 0.00 3.59
258 259 3.555956 CCGGTGGATTTACAAAGATCGAG 59.444 47.826 0.00 0.00 0.00 4.04
259 260 4.181578 CGGTGGATTTACAAAGATCGAGT 58.818 43.478 0.00 0.00 0.00 4.18
260 261 4.630069 CGGTGGATTTACAAAGATCGAGTT 59.370 41.667 0.00 0.00 0.00 3.01
261 262 5.808540 CGGTGGATTTACAAAGATCGAGTTA 59.191 40.000 0.00 0.00 0.00 2.24
262 263 6.479001 CGGTGGATTTACAAAGATCGAGTTAT 59.521 38.462 0.00 0.00 0.00 1.89
263 264 7.011109 CGGTGGATTTACAAAGATCGAGTTATT 59.989 37.037 0.00 0.00 0.00 1.40
264 265 8.122952 GGTGGATTTACAAAGATCGAGTTATTG 58.877 37.037 0.00 0.00 0.00 1.90
265 266 8.665685 GTGGATTTACAAAGATCGAGTTATTGT 58.334 33.333 11.66 11.66 37.86 2.71
266 267 9.226606 TGGATTTACAAAGATCGAGTTATTGTT 57.773 29.630 12.05 0.00 35.89 2.83
267 268 9.490663 GGATTTACAAAGATCGAGTTATTGTTG 57.509 33.333 12.05 3.19 35.89 3.33
268 269 9.490663 GATTTACAAAGATCGAGTTATTGTTGG 57.509 33.333 12.05 0.00 35.89 3.77
269 270 5.880054 ACAAAGATCGAGTTATTGTTGGG 57.120 39.130 0.00 0.00 30.50 4.12
270 271 4.156008 ACAAAGATCGAGTTATTGTTGGGC 59.844 41.667 0.00 0.00 30.50 5.36
271 272 3.627395 AGATCGAGTTATTGTTGGGCA 57.373 42.857 0.00 0.00 0.00 5.36
272 273 3.270877 AGATCGAGTTATTGTTGGGCAC 58.729 45.455 0.00 0.00 0.00 5.01
273 274 1.434555 TCGAGTTATTGTTGGGCACG 58.565 50.000 0.00 0.00 0.00 5.34
274 275 1.001068 TCGAGTTATTGTTGGGCACGA 59.999 47.619 0.00 0.00 0.00 4.35
275 276 1.393539 CGAGTTATTGTTGGGCACGAG 59.606 52.381 0.00 0.00 0.00 4.18
276 277 2.423577 GAGTTATTGTTGGGCACGAGT 58.576 47.619 0.00 0.00 0.00 4.18
277 278 2.151202 AGTTATTGTTGGGCACGAGTG 58.849 47.619 0.00 0.00 0.00 3.51
278 279 1.199097 GTTATTGTTGGGCACGAGTGG 59.801 52.381 5.32 0.00 0.00 4.00
289 290 3.099267 GCACGAGTGGCTGTATTATCT 57.901 47.619 5.32 0.00 0.00 1.98
290 291 2.797156 GCACGAGTGGCTGTATTATCTG 59.203 50.000 5.32 0.00 0.00 2.90
291 292 3.384668 CACGAGTGGCTGTATTATCTGG 58.615 50.000 0.00 0.00 0.00 3.86
292 293 2.365617 ACGAGTGGCTGTATTATCTGGG 59.634 50.000 0.00 0.00 0.00 4.45
293 294 2.365617 CGAGTGGCTGTATTATCTGGGT 59.634 50.000 0.00 0.00 0.00 4.51
294 295 3.572682 CGAGTGGCTGTATTATCTGGGTA 59.427 47.826 0.00 0.00 0.00 3.69
295 296 4.220821 CGAGTGGCTGTATTATCTGGGTAT 59.779 45.833 0.00 0.00 0.00 2.73
296 297 5.417894 CGAGTGGCTGTATTATCTGGGTATA 59.582 44.000 0.00 0.00 0.00 1.47
297 298 6.096987 CGAGTGGCTGTATTATCTGGGTATAT 59.903 42.308 0.00 0.00 0.00 0.86
298 299 7.363880 CGAGTGGCTGTATTATCTGGGTATATT 60.364 40.741 0.00 0.00 0.00 1.28
299 300 8.219660 AGTGGCTGTATTATCTGGGTATATTT 57.780 34.615 0.00 0.00 0.00 1.40
300 301 9.333961 AGTGGCTGTATTATCTGGGTATATTTA 57.666 33.333 0.00 0.00 0.00 1.40
329 330 9.650539 CTAAGTAGATTTCATGTATCCTGATGG 57.349 37.037 0.00 0.00 0.00 3.51
330 331 7.623999 AGTAGATTTCATGTATCCTGATGGT 57.376 36.000 0.00 0.00 34.23 3.55
331 332 7.675062 AGTAGATTTCATGTATCCTGATGGTC 58.325 38.462 0.00 0.00 34.23 4.02
332 333 5.874093 AGATTTCATGTATCCTGATGGTCC 58.126 41.667 0.00 0.00 34.23 4.46
333 334 5.370584 AGATTTCATGTATCCTGATGGTCCA 59.629 40.000 0.00 0.00 34.23 4.02
334 335 5.651612 TTTCATGTATCCTGATGGTCCAT 57.348 39.130 3.26 3.26 34.23 3.41
335 336 4.628963 TCATGTATCCTGATGGTCCATG 57.371 45.455 9.76 0.00 36.30 3.66
336 337 3.975982 TCATGTATCCTGATGGTCCATGT 59.024 43.478 9.76 0.00 36.34 3.21
337 338 5.154418 TCATGTATCCTGATGGTCCATGTA 58.846 41.667 9.76 0.00 36.34 2.29
338 339 5.246883 TCATGTATCCTGATGGTCCATGTAG 59.753 44.000 9.76 7.38 36.34 2.74
339 340 4.814967 TGTATCCTGATGGTCCATGTAGA 58.185 43.478 9.76 2.91 34.23 2.59
340 341 4.835056 TGTATCCTGATGGTCCATGTAGAG 59.165 45.833 9.76 0.00 34.23 2.43
341 342 3.404869 TCCTGATGGTCCATGTAGAGT 57.595 47.619 9.76 0.00 34.23 3.24
342 343 3.724478 TCCTGATGGTCCATGTAGAGTT 58.276 45.455 9.76 0.00 34.23 3.01
343 344 3.452264 TCCTGATGGTCCATGTAGAGTTG 59.548 47.826 9.76 0.00 34.23 3.16
344 345 3.198635 CCTGATGGTCCATGTAGAGTTGT 59.801 47.826 9.76 0.00 0.00 3.32
345 346 4.323792 CCTGATGGTCCATGTAGAGTTGTT 60.324 45.833 9.76 0.00 0.00 2.83
346 347 4.578871 TGATGGTCCATGTAGAGTTGTTG 58.421 43.478 9.76 0.00 0.00 3.33
347 348 3.417069 TGGTCCATGTAGAGTTGTTGG 57.583 47.619 0.00 0.00 0.00 3.77
348 349 2.708861 TGGTCCATGTAGAGTTGTTGGT 59.291 45.455 0.00 0.00 0.00 3.67
349 350 3.137544 TGGTCCATGTAGAGTTGTTGGTT 59.862 43.478 0.00 0.00 0.00 3.67
350 351 4.348461 TGGTCCATGTAGAGTTGTTGGTTA 59.652 41.667 0.00 0.00 0.00 2.85
351 352 4.935808 GGTCCATGTAGAGTTGTTGGTTAG 59.064 45.833 0.00 0.00 0.00 2.34
352 353 5.279809 GGTCCATGTAGAGTTGTTGGTTAGA 60.280 44.000 0.00 0.00 0.00 2.10
353 354 6.228258 GTCCATGTAGAGTTGTTGGTTAGAA 58.772 40.000 0.00 0.00 0.00 2.10
354 355 6.879458 GTCCATGTAGAGTTGTTGGTTAGAAT 59.121 38.462 0.00 0.00 0.00 2.40
355 356 7.390718 GTCCATGTAGAGTTGTTGGTTAGAATT 59.609 37.037 0.00 0.00 0.00 2.17
356 357 7.942341 TCCATGTAGAGTTGTTGGTTAGAATTT 59.058 33.333 0.00 0.00 0.00 1.82
357 358 8.576442 CCATGTAGAGTTGTTGGTTAGAATTTT 58.424 33.333 0.00 0.00 0.00 1.82
358 359 9.965824 CATGTAGAGTTGTTGGTTAGAATTTTT 57.034 29.630 0.00 0.00 0.00 1.94
361 362 9.888878 GTAGAGTTGTTGGTTAGAATTTTTACC 57.111 33.333 0.00 0.00 0.00 2.85
362 363 7.645402 AGAGTTGTTGGTTAGAATTTTTACCG 58.355 34.615 0.36 0.00 33.29 4.02
363 364 7.499895 AGAGTTGTTGGTTAGAATTTTTACCGA 59.500 33.333 0.36 0.00 33.29 4.69
364 365 8.173542 AGTTGTTGGTTAGAATTTTTACCGAT 57.826 30.769 0.00 0.00 33.29 4.18
365 366 9.287373 AGTTGTTGGTTAGAATTTTTACCGATA 57.713 29.630 0.00 0.00 33.29 2.92
366 367 9.550811 GTTGTTGGTTAGAATTTTTACCGATAG 57.449 33.333 0.00 0.00 33.29 2.08
367 368 8.851541 TGTTGGTTAGAATTTTTACCGATAGT 57.148 30.769 0.00 0.00 33.29 2.12
368 369 8.938906 TGTTGGTTAGAATTTTTACCGATAGTC 58.061 33.333 0.00 0.00 33.29 2.59
369 370 9.159364 GTTGGTTAGAATTTTTACCGATAGTCT 57.841 33.333 0.00 0.00 33.29 3.24
370 371 8.937634 TGGTTAGAATTTTTACCGATAGTCTC 57.062 34.615 0.36 0.00 33.29 3.36
372 373 7.306457 GGTTAGAATTTTTACCGATAGTCTCGC 60.306 40.741 0.00 0.00 46.25 5.03
373 374 5.657474 AGAATTTTTACCGATAGTCTCGCA 58.343 37.500 0.00 0.00 46.25 5.10
374 375 5.519206 AGAATTTTTACCGATAGTCTCGCAC 59.481 40.000 0.00 0.00 46.25 5.34
375 376 3.853831 TTTTACCGATAGTCTCGCACA 57.146 42.857 0.00 0.00 46.25 4.57
376 377 4.380841 TTTTACCGATAGTCTCGCACAT 57.619 40.909 0.00 0.00 46.25 3.21
377 378 3.349488 TTACCGATAGTCTCGCACATG 57.651 47.619 0.00 0.00 46.25 3.21
378 379 0.385751 ACCGATAGTCTCGCACATGG 59.614 55.000 0.00 0.00 46.25 3.66
379 380 0.385751 CCGATAGTCTCGCACATGGT 59.614 55.000 0.00 0.00 46.25 3.55
380 381 1.600663 CCGATAGTCTCGCACATGGTC 60.601 57.143 0.00 0.00 46.25 4.02
381 382 1.065551 CGATAGTCTCGCACATGGTCA 59.934 52.381 0.00 0.00 41.14 4.02
382 383 2.287849 CGATAGTCTCGCACATGGTCAT 60.288 50.000 0.00 0.00 41.14 3.06
383 384 2.871182 TAGTCTCGCACATGGTCATC 57.129 50.000 0.00 0.00 0.00 2.92
384 385 0.176680 AGTCTCGCACATGGTCATCC 59.823 55.000 0.00 0.00 0.00 3.51
385 386 0.176680 GTCTCGCACATGGTCATCCT 59.823 55.000 0.00 0.00 34.23 3.24
386 387 0.461548 TCTCGCACATGGTCATCCTC 59.538 55.000 0.00 0.00 34.23 3.71
387 388 0.176449 CTCGCACATGGTCATCCTCA 59.824 55.000 0.00 0.00 34.23 3.86
388 389 0.108186 TCGCACATGGTCATCCTCAC 60.108 55.000 0.00 0.00 34.23 3.51
389 390 0.107993 CGCACATGGTCATCCTCACT 60.108 55.000 0.00 0.00 34.23 3.41
390 391 1.136891 CGCACATGGTCATCCTCACTA 59.863 52.381 0.00 0.00 34.23 2.74
391 392 2.418609 CGCACATGGTCATCCTCACTAA 60.419 50.000 0.00 0.00 34.23 2.24
392 393 3.609853 GCACATGGTCATCCTCACTAAA 58.390 45.455 0.00 0.00 34.23 1.85
393 394 4.202441 GCACATGGTCATCCTCACTAAAT 58.798 43.478 0.00 0.00 34.23 1.40
394 395 4.274459 GCACATGGTCATCCTCACTAAATC 59.726 45.833 0.00 0.00 34.23 2.17
395 396 5.678583 CACATGGTCATCCTCACTAAATCT 58.321 41.667 0.00 0.00 34.23 2.40
396 397 5.757320 CACATGGTCATCCTCACTAAATCTC 59.243 44.000 0.00 0.00 34.23 2.75
397 398 5.163258 ACATGGTCATCCTCACTAAATCTCC 60.163 44.000 0.00 0.00 34.23 3.71
398 399 3.384789 TGGTCATCCTCACTAAATCTCCG 59.615 47.826 0.00 0.00 34.23 4.63
399 400 3.385111 GGTCATCCTCACTAAATCTCCGT 59.615 47.826 0.00 0.00 0.00 4.69
400 401 4.583489 GGTCATCCTCACTAAATCTCCGTA 59.417 45.833 0.00 0.00 0.00 4.02
401 402 5.507650 GGTCATCCTCACTAAATCTCCGTAC 60.508 48.000 0.00 0.00 0.00 3.67
402 403 5.299782 GTCATCCTCACTAAATCTCCGTACT 59.700 44.000 0.00 0.00 0.00 2.73
403 404 5.892119 TCATCCTCACTAAATCTCCGTACTT 59.108 40.000 0.00 0.00 0.00 2.24
404 405 6.380274 TCATCCTCACTAAATCTCCGTACTTT 59.620 38.462 0.00 0.00 0.00 2.66
405 406 6.205101 TCCTCACTAAATCTCCGTACTTTC 57.795 41.667 0.00 0.00 0.00 2.62
406 407 5.950549 TCCTCACTAAATCTCCGTACTTTCT 59.049 40.000 0.00 0.00 0.00 2.52
407 408 6.037098 CCTCACTAAATCTCCGTACTTTCTG 58.963 44.000 0.00 0.00 0.00 3.02
408 409 5.408356 TCACTAAATCTCCGTACTTTCTGC 58.592 41.667 0.00 0.00 0.00 4.26
409 410 5.185249 TCACTAAATCTCCGTACTTTCTGCT 59.815 40.000 0.00 0.00 0.00 4.24
410 411 6.376299 TCACTAAATCTCCGTACTTTCTGCTA 59.624 38.462 0.00 0.00 0.00 3.49
411 412 7.033791 CACTAAATCTCCGTACTTTCTGCTAA 58.966 38.462 0.00 0.00 0.00 3.09
412 413 7.707035 CACTAAATCTCCGTACTTTCTGCTAAT 59.293 37.037 0.00 0.00 0.00 1.73
413 414 8.258708 ACTAAATCTCCGTACTTTCTGCTAATT 58.741 33.333 0.00 0.00 0.00 1.40
414 415 7.923414 AAATCTCCGTACTTTCTGCTAATTT 57.077 32.000 0.00 0.00 0.00 1.82
415 416 6.910536 ATCTCCGTACTTTCTGCTAATTTG 57.089 37.500 0.00 0.00 0.00 2.32
416 417 5.175859 TCTCCGTACTTTCTGCTAATTTGG 58.824 41.667 0.00 0.00 0.00 3.28
417 418 5.046878 TCTCCGTACTTTCTGCTAATTTGGA 60.047 40.000 0.00 0.00 0.00 3.53
418 419 5.741011 TCCGTACTTTCTGCTAATTTGGAT 58.259 37.500 0.00 0.00 0.00 3.41
419 420 6.177610 TCCGTACTTTCTGCTAATTTGGATT 58.822 36.000 0.00 0.00 0.00 3.01
420 421 6.093495 TCCGTACTTTCTGCTAATTTGGATTG 59.907 38.462 0.00 0.00 0.00 2.67
421 422 5.739161 CGTACTTTCTGCTAATTTGGATTGC 59.261 40.000 0.00 0.00 0.00 3.56
422 423 5.077134 ACTTTCTGCTAATTTGGATTGCC 57.923 39.130 0.00 0.00 0.00 4.52
423 424 3.781079 TTCTGCTAATTTGGATTGCCG 57.219 42.857 0.00 0.00 36.79 5.69
424 425 2.997980 TCTGCTAATTTGGATTGCCGA 58.002 42.857 0.00 0.00 36.79 5.54
425 426 3.351740 TCTGCTAATTTGGATTGCCGAA 58.648 40.909 0.00 0.00 41.78 4.30
426 427 3.378112 TCTGCTAATTTGGATTGCCGAAG 59.622 43.478 0.00 0.00 40.88 3.79
427 428 3.088532 TGCTAATTTGGATTGCCGAAGT 58.911 40.909 0.00 0.00 40.88 3.01
428 429 4.265893 TGCTAATTTGGATTGCCGAAGTA 58.734 39.130 0.00 0.00 40.88 2.24
429 430 4.095782 TGCTAATTTGGATTGCCGAAGTAC 59.904 41.667 0.00 0.00 40.88 2.73
430 431 4.497507 GCTAATTTGGATTGCCGAAGTACC 60.498 45.833 0.00 0.00 40.88 3.34
431 432 1.444836 TTTGGATTGCCGAAGTACCG 58.555 50.000 0.00 0.00 36.79 4.02
432 433 0.609151 TTGGATTGCCGAAGTACCGA 59.391 50.000 0.00 0.00 36.79 4.69
433 434 0.828022 TGGATTGCCGAAGTACCGAT 59.172 50.000 0.00 0.00 36.79 4.18
434 435 2.033372 TGGATTGCCGAAGTACCGATA 58.967 47.619 0.00 0.00 36.79 2.92
435 436 2.035449 TGGATTGCCGAAGTACCGATAG 59.965 50.000 0.00 0.00 36.79 2.08
436 437 2.059541 GATTGCCGAAGTACCGATAGC 58.940 52.381 0.00 0.00 0.00 2.97
437 438 0.103572 TTGCCGAAGTACCGATAGCC 59.896 55.000 0.00 0.00 0.00 3.93
438 439 0.754217 TGCCGAAGTACCGATAGCCT 60.754 55.000 0.00 0.00 0.00 4.58
439 440 0.388294 GCCGAAGTACCGATAGCCTT 59.612 55.000 0.00 0.00 0.00 4.35
440 441 1.610522 GCCGAAGTACCGATAGCCTTA 59.389 52.381 0.00 0.00 0.00 2.69
441 442 2.606551 GCCGAAGTACCGATAGCCTTAC 60.607 54.545 0.00 0.00 0.00 2.34
442 443 2.620115 CCGAAGTACCGATAGCCTTACA 59.380 50.000 0.00 0.00 0.00 2.41
443 444 3.255149 CCGAAGTACCGATAGCCTTACAT 59.745 47.826 0.00 0.00 0.00 2.29
444 445 4.261909 CCGAAGTACCGATAGCCTTACATT 60.262 45.833 0.00 0.00 0.00 2.71
445 446 4.680110 CGAAGTACCGATAGCCTTACATTG 59.320 45.833 0.00 0.00 0.00 2.82
446 447 4.602340 AGTACCGATAGCCTTACATTGG 57.398 45.455 0.00 0.00 0.00 3.16
447 448 4.220724 AGTACCGATAGCCTTACATTGGA 58.779 43.478 0.00 0.00 31.11 3.53
448 449 4.652421 AGTACCGATAGCCTTACATTGGAA 59.348 41.667 0.00 0.00 31.11 3.53
449 450 4.497291 ACCGATAGCCTTACATTGGAAA 57.503 40.909 0.00 0.00 31.11 3.13
450 451 5.048846 ACCGATAGCCTTACATTGGAAAT 57.951 39.130 0.00 0.00 31.11 2.17
451 452 6.182507 ACCGATAGCCTTACATTGGAAATA 57.817 37.500 0.00 0.00 31.11 1.40
452 453 6.231211 ACCGATAGCCTTACATTGGAAATAG 58.769 40.000 0.00 0.00 31.11 1.73
453 454 6.042781 ACCGATAGCCTTACATTGGAAATAGA 59.957 38.462 0.00 0.00 31.11 1.98
454 455 7.106239 CCGATAGCCTTACATTGGAAATAGAT 58.894 38.462 0.00 0.00 0.00 1.98
455 456 7.278868 CCGATAGCCTTACATTGGAAATAGATC 59.721 40.741 0.00 0.00 0.00 2.75
456 457 7.819415 CGATAGCCTTACATTGGAAATAGATCA 59.181 37.037 0.00 0.00 0.00 2.92
457 458 9.678260 GATAGCCTTACATTGGAAATAGATCAT 57.322 33.333 0.00 0.00 0.00 2.45
458 459 7.992754 AGCCTTACATTGGAAATAGATCATC 57.007 36.000 0.00 0.00 0.00 2.92
459 460 6.652481 AGCCTTACATTGGAAATAGATCATCG 59.348 38.462 0.00 0.00 0.00 3.84
460 461 6.621596 GCCTTACATTGGAAATAGATCATCGC 60.622 42.308 0.00 0.00 0.00 4.58
461 462 6.128172 CCTTACATTGGAAATAGATCATCGCC 60.128 42.308 0.00 0.00 0.00 5.54
462 463 3.748048 ACATTGGAAATAGATCATCGCCG 59.252 43.478 0.00 0.00 0.00 6.46
463 464 3.469008 TTGGAAATAGATCATCGCCGT 57.531 42.857 0.00 0.00 0.00 5.68
464 465 3.026630 TGGAAATAGATCATCGCCGTC 57.973 47.619 0.00 0.00 0.00 4.79
465 466 2.288825 TGGAAATAGATCATCGCCGTCC 60.289 50.000 0.00 0.00 0.00 4.79
466 467 2.288825 GGAAATAGATCATCGCCGTCCA 60.289 50.000 0.00 0.00 0.00 4.02
467 468 2.732412 AATAGATCATCGCCGTCCAG 57.268 50.000 0.00 0.00 0.00 3.86
468 469 1.621992 ATAGATCATCGCCGTCCAGT 58.378 50.000 0.00 0.00 0.00 4.00
469 470 0.952280 TAGATCATCGCCGTCCAGTC 59.048 55.000 0.00 0.00 0.00 3.51
470 471 1.300233 GATCATCGCCGTCCAGTCC 60.300 63.158 0.00 0.00 0.00 3.85
471 472 2.016393 GATCATCGCCGTCCAGTCCA 62.016 60.000 0.00 0.00 0.00 4.02
472 473 1.402896 ATCATCGCCGTCCAGTCCAT 61.403 55.000 0.00 0.00 0.00 3.41
473 474 1.884464 CATCGCCGTCCAGTCCATG 60.884 63.158 0.00 0.00 0.00 3.66
474 475 2.359169 ATCGCCGTCCAGTCCATGT 61.359 57.895 0.00 0.00 0.00 3.21
475 476 2.298158 ATCGCCGTCCAGTCCATGTC 62.298 60.000 0.00 0.00 0.00 3.06
476 477 2.982130 GCCGTCCAGTCCATGTCT 59.018 61.111 0.00 0.00 0.00 3.41
477 478 1.296715 GCCGTCCAGTCCATGTCTT 59.703 57.895 0.00 0.00 0.00 3.01
478 479 0.321653 GCCGTCCAGTCCATGTCTTT 60.322 55.000 0.00 0.00 0.00 2.52
479 480 1.442769 CCGTCCAGTCCATGTCTTTG 58.557 55.000 0.00 0.00 0.00 2.77
480 481 1.270839 CCGTCCAGTCCATGTCTTTGT 60.271 52.381 0.00 0.00 0.00 2.83
481 482 2.069273 CGTCCAGTCCATGTCTTTGTC 58.931 52.381 0.00 0.00 0.00 3.18
482 483 2.289072 CGTCCAGTCCATGTCTTTGTCT 60.289 50.000 0.00 0.00 0.00 3.41
483 484 3.330267 GTCCAGTCCATGTCTTTGTCTC 58.670 50.000 0.00 0.00 0.00 3.36
484 485 3.007398 GTCCAGTCCATGTCTTTGTCTCT 59.993 47.826 0.00 0.00 0.00 3.10
485 486 3.648067 TCCAGTCCATGTCTTTGTCTCTT 59.352 43.478 0.00 0.00 0.00 2.85
486 487 4.103153 TCCAGTCCATGTCTTTGTCTCTTT 59.897 41.667 0.00 0.00 0.00 2.52
487 488 5.306937 TCCAGTCCATGTCTTTGTCTCTTTA 59.693 40.000 0.00 0.00 0.00 1.85
488 489 6.013379 TCCAGTCCATGTCTTTGTCTCTTTAT 60.013 38.462 0.00 0.00 0.00 1.40
489 490 6.093219 CCAGTCCATGTCTTTGTCTCTTTATG 59.907 42.308 0.00 0.00 0.00 1.90
490 491 6.652481 CAGTCCATGTCTTTGTCTCTTTATGT 59.348 38.462 0.00 0.00 0.00 2.29
491 492 7.819415 CAGTCCATGTCTTTGTCTCTTTATGTA 59.181 37.037 0.00 0.00 0.00 2.29
492 493 7.819900 AGTCCATGTCTTTGTCTCTTTATGTAC 59.180 37.037 0.00 0.00 0.00 2.90
503 504 8.117813 TGTCTCTTTATGTACTCATACACACA 57.882 34.615 0.00 0.00 44.11 3.72
505 506 9.239002 GTCTCTTTATGTACTCATACACACATC 57.761 37.037 0.00 0.00 44.11 3.06
525 526 2.167281 TCTAGACATGGTTGCTCTGCTC 59.833 50.000 0.00 0.00 0.00 4.26
528 529 1.669779 GACATGGTTGCTCTGCTCATC 59.330 52.381 0.00 0.00 0.00 2.92
536 537 4.201990 GGTTGCTCTGCTCATCTTATTTGG 60.202 45.833 0.00 0.00 0.00 3.28
537 538 4.492494 TGCTCTGCTCATCTTATTTGGA 57.508 40.909 0.00 0.00 0.00 3.53
539 540 4.880120 TGCTCTGCTCATCTTATTTGGAAG 59.120 41.667 0.00 0.00 0.00 3.46
540 541 4.880696 GCTCTGCTCATCTTATTTGGAAGT 59.119 41.667 0.00 0.00 0.00 3.01
541 542 6.051717 GCTCTGCTCATCTTATTTGGAAGTA 58.948 40.000 0.00 0.00 0.00 2.24
542 543 6.018343 GCTCTGCTCATCTTATTTGGAAGTAC 60.018 42.308 0.00 0.00 0.00 2.73
543 544 7.187824 TCTGCTCATCTTATTTGGAAGTACT 57.812 36.000 0.00 0.00 0.00 2.73
563 564 9.502091 AAGTACTAACATTCAACTGCAGATTTA 57.498 29.630 23.35 2.79 0.00 1.40
600 601 1.103803 TAGACCATCTCACTCCACGC 58.896 55.000 0.00 0.00 0.00 5.34
611 612 0.969149 ACTCCACGCTTCATGACTCA 59.031 50.000 0.00 0.00 0.00 3.41
632 633 8.759481 ACTCAGTTGATCTCTTCATATAGACA 57.241 34.615 0.00 0.00 33.34 3.41
670 671 5.175673 GCTGACTTATTGCTTTGTTGTTTCC 59.824 40.000 0.00 0.00 0.00 3.13
721 723 8.603898 TCTGGAATTAGACCATAAGAGTTACA 57.396 34.615 0.00 0.00 36.79 2.41
722 724 9.213777 TCTGGAATTAGACCATAAGAGTTACAT 57.786 33.333 0.00 0.00 36.79 2.29
739 741 3.228188 ACATTCTTGCCTTCCAGTTCA 57.772 42.857 0.00 0.00 0.00 3.18
782 784 3.005155 GCTTTCTGTTCATGGTTGCTCTT 59.995 43.478 0.00 0.00 0.00 2.85
795 797 6.325919 TGGTTGCTCTTAGGTTGTTATTTG 57.674 37.500 0.00 0.00 0.00 2.32
801 803 8.319143 TGCTCTTAGGTTGTTATTTGTTAGAC 57.681 34.615 0.00 0.00 0.00 2.59
833 835 7.378966 TCTATCAGAAATTTAGATGGCCGTAG 58.621 38.462 0.00 4.76 0.00 3.51
836 838 5.128827 TCAGAAATTTAGATGGCCGTAGTCT 59.871 40.000 0.00 0.81 0.00 3.24
837 839 5.235186 CAGAAATTTAGATGGCCGTAGTCTG 59.765 44.000 0.00 0.00 0.00 3.51
852 854 4.905866 CGTAGTCTGTGTTTCATTGCTTTG 59.094 41.667 0.00 0.00 0.00 2.77
917 919 7.354751 ACAGGATTAGATTACCAGAGTCTTC 57.645 40.000 0.00 0.00 0.00 2.87
939 941 5.152097 TCGTCTCACGACTTTGTTTATCTC 58.848 41.667 0.00 0.00 46.73 2.75
941 945 5.629849 CGTCTCACGACTTTGTTTATCTCTT 59.370 40.000 0.00 0.00 46.05 2.85
954 958 7.946655 TGTTTATCTCTTGAATATACGCCTG 57.053 36.000 0.00 0.00 0.00 4.85
984 988 8.526147 AGCTTACTCATCTTGTTTTATTTGCAT 58.474 29.630 0.00 0.00 0.00 3.96
1023 1027 3.817084 TGCAGATCTTTGTGAAGACCTTG 59.183 43.478 0.00 0.00 44.27 3.61
1470 1474 1.837051 TGGCCAGTGAGTCCTTCGT 60.837 57.895 0.00 0.00 0.00 3.85
1535 1540 5.687166 TCTTCCCCTGTTACGATTTACAT 57.313 39.130 0.00 0.00 0.00 2.29
1585 1595 2.229792 GTCCTGTGCCATTTGTGAGAA 58.770 47.619 0.00 0.00 0.00 2.87
1586 1596 2.030805 GTCCTGTGCCATTTGTGAGAAC 60.031 50.000 0.00 0.00 0.00 3.01
1587 1597 1.955778 CCTGTGCCATTTGTGAGAACA 59.044 47.619 0.00 0.00 0.00 3.18
1588 1598 2.559668 CCTGTGCCATTTGTGAGAACAT 59.440 45.455 0.00 0.00 0.00 2.71
1589 1599 3.366679 CCTGTGCCATTTGTGAGAACATC 60.367 47.826 0.00 0.00 0.00 3.06
1591 1601 3.253921 TGTGCCATTTGTGAGAACATCTG 59.746 43.478 0.00 0.00 0.00 2.90
1592 1602 3.503363 GTGCCATTTGTGAGAACATCTGA 59.497 43.478 0.00 0.00 0.00 3.27
1593 1603 4.157289 GTGCCATTTGTGAGAACATCTGAT 59.843 41.667 0.00 0.00 0.00 2.90
1594 1604 4.157105 TGCCATTTGTGAGAACATCTGATG 59.843 41.667 15.83 15.83 0.00 3.07
1595 1605 4.669318 CCATTTGTGAGAACATCTGATGC 58.331 43.478 17.24 2.53 0.00 3.91
1596 1606 4.398358 CCATTTGTGAGAACATCTGATGCT 59.602 41.667 17.24 5.32 0.00 3.79
1597 1607 5.332707 CATTTGTGAGAACATCTGATGCTG 58.667 41.667 17.24 0.00 0.00 4.41
1599 1611 1.669779 GTGAGAACATCTGATGCTGCC 59.330 52.381 17.24 5.79 0.00 4.85
1602 1614 2.355132 GAGAACATCTGATGCTGCCTTG 59.645 50.000 17.24 0.00 0.00 3.61
1603 1615 2.089980 GAACATCTGATGCTGCCTTGT 58.910 47.619 17.24 0.00 0.00 3.16
1618 1630 2.434428 CCTTGTGCAGCTTGATCTCTT 58.566 47.619 0.00 0.00 0.00 2.85
1619 1631 2.419324 CCTTGTGCAGCTTGATCTCTTC 59.581 50.000 0.00 0.00 0.00 2.87
1639 1654 7.286546 TCTCTTCTATGAATAAGTGACCCTGAG 59.713 40.741 0.00 0.00 0.00 3.35
1677 2706 2.104967 ACCCGATCCTCGTTGTGATAA 58.895 47.619 0.00 0.00 38.40 1.75
1686 2715 9.793245 CGATCCTCGTTGTGATAATAATTTAAC 57.207 33.333 0.00 0.00 34.72 2.01
1715 2744 2.093658 CCAGGTTGCCGTACTAATCAGT 60.094 50.000 0.00 0.00 38.91 3.41
1716 2745 3.596214 CAGGTTGCCGTACTAATCAGTT 58.404 45.455 0.00 0.00 36.14 3.16
1757 2786 2.248248 CTGAGGGGACTGACACAAGTA 58.752 52.381 0.00 0.00 44.43 2.24
1786 2815 0.779997 AGGTTCAGTGGGCCAGAATT 59.220 50.000 6.40 0.00 0.00 2.17
1791 2820 3.297134 TCAGTGGGCCAGAATTTATCC 57.703 47.619 6.40 0.00 0.00 2.59
1818 2847 8.985805 CAAGAAAAGAAAATGGGATCTTCTTTG 58.014 33.333 16.14 5.43 44.59 2.77
1836 2865 8.939929 TCTTCTTTGTATTCAGATGAATGTGAC 58.060 33.333 16.49 8.64 43.90 3.67
1862 2891 3.362596 CGTTGACACAAAGTACCATGTCG 60.363 47.826 10.19 3.43 43.58 4.35
1927 2997 3.417101 TGTCGTTATCCTGCCACATTTT 58.583 40.909 0.00 0.00 0.00 1.82
1954 3024 2.689658 TCCTCCTCCAGAAACAGTTGA 58.310 47.619 0.00 0.00 0.00 3.18
1958 3028 2.368875 TCCTCCAGAAACAGTTGACCTC 59.631 50.000 0.00 0.00 0.00 3.85
1963 3033 3.433598 CCAGAAACAGTTGACCTCCAGAA 60.434 47.826 0.00 0.00 0.00 3.02
1964 3034 4.199310 CAGAAACAGTTGACCTCCAGAAA 58.801 43.478 0.00 0.00 0.00 2.52
1996 3129 0.613260 CACGTTCCCCTGATCCTCAA 59.387 55.000 0.00 0.00 0.00 3.02
1998 3131 0.613260 CGTTCCCCTGATCCTCAACA 59.387 55.000 0.00 0.00 0.00 3.33
2063 3196 1.138459 TGTTTTGTGCTGCGTGTGG 59.862 52.632 0.00 0.00 0.00 4.17
2100 3233 2.159179 ACCATAGATTTTGGGGGTGC 57.841 50.000 0.00 0.00 38.64 5.01
2136 3269 1.004560 CTGGAAGCGACTTGGCTCA 60.005 57.895 0.00 0.00 43.93 4.26
2193 3326 4.298626 ACTATGATTCCCAGAGCAGGTTA 58.701 43.478 0.00 0.00 37.62 2.85
2239 3372 3.936203 AGGCGCCGGAGTTTGACA 61.936 61.111 23.20 0.00 0.00 3.58
2247 3380 2.547218 GCCGGAGTTTGACAAGTCTGTA 60.547 50.000 5.05 0.00 37.10 2.74
2416 3549 0.393537 CGCAAGGGGAAGAGAAGCAT 60.394 55.000 0.00 0.00 0.00 3.79
2453 3587 0.533491 GCTGGATCAAAGCCAATGCA 59.467 50.000 8.14 0.00 41.13 3.96
2517 3651 1.357258 GGTGCTGCGAGATCACACAG 61.357 60.000 4.04 4.04 32.89 3.66
2612 3746 0.321919 AGAAAGCAATCGAGCTGGCA 60.322 50.000 0.00 0.00 45.89 4.92
2684 3818 3.119884 TGGTTTCGATGCTTAACATGCAG 60.120 43.478 0.00 0.00 44.04 4.41
2697 3831 3.890527 ATGCAGGACATGAACCTCC 57.109 52.632 11.88 2.99 37.70 4.30
2704 3838 4.856801 CATGAACCTCCCCGCCCG 62.857 72.222 0.00 0.00 0.00 6.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 4.993705 TTATATAGTTGGGGCAAGGAGG 57.006 45.455 0.00 0.00 0.00 4.30
5 6 6.562608 AGAGAATTATATAGTTGGGGCAAGGA 59.437 38.462 0.00 0.00 0.00 3.36
6 7 6.784031 AGAGAATTATATAGTTGGGGCAAGG 58.216 40.000 0.00 0.00 0.00 3.61
7 8 6.591834 CGAGAGAATTATATAGTTGGGGCAAG 59.408 42.308 0.00 0.00 0.00 4.01
8 9 6.464222 CGAGAGAATTATATAGTTGGGGCAA 58.536 40.000 0.00 0.00 0.00 4.52
9 10 5.568825 GCGAGAGAATTATATAGTTGGGGCA 60.569 44.000 0.00 0.00 0.00 5.36
10 11 4.870991 GCGAGAGAATTATATAGTTGGGGC 59.129 45.833 0.00 0.00 0.00 5.80
11 12 6.037786 TGCGAGAGAATTATATAGTTGGGG 57.962 41.667 0.00 0.00 0.00 4.96
12 13 5.578727 GCTGCGAGAGAATTATATAGTTGGG 59.421 44.000 0.00 0.00 0.00 4.12
13 14 5.578727 GGCTGCGAGAGAATTATATAGTTGG 59.421 44.000 0.00 0.00 0.00 3.77
14 15 5.578727 GGGCTGCGAGAGAATTATATAGTTG 59.421 44.000 0.00 0.00 0.00 3.16
15 16 5.337652 GGGGCTGCGAGAGAATTATATAGTT 60.338 44.000 0.00 0.00 0.00 2.24
16 17 4.160626 GGGGCTGCGAGAGAATTATATAGT 59.839 45.833 0.00 0.00 0.00 2.12
17 18 4.442192 GGGGGCTGCGAGAGAATTATATAG 60.442 50.000 0.00 0.00 0.00 1.31
18 19 3.451178 GGGGGCTGCGAGAGAATTATATA 59.549 47.826 0.00 0.00 0.00 0.86
19 20 2.237392 GGGGGCTGCGAGAGAATTATAT 59.763 50.000 0.00 0.00 0.00 0.86
20 21 1.623811 GGGGGCTGCGAGAGAATTATA 59.376 52.381 0.00 0.00 0.00 0.98
21 22 0.398318 GGGGGCTGCGAGAGAATTAT 59.602 55.000 0.00 0.00 0.00 1.28
22 23 0.691078 AGGGGGCTGCGAGAGAATTA 60.691 55.000 0.00 0.00 0.00 1.40
23 24 1.977293 GAGGGGGCTGCGAGAGAATT 61.977 60.000 0.00 0.00 0.00 2.17
24 25 2.366167 AGGGGGCTGCGAGAGAAT 60.366 61.111 0.00 0.00 0.00 2.40
25 26 3.077556 GAGGGGGCTGCGAGAGAA 61.078 66.667 0.00 0.00 0.00 2.87
28 29 4.841617 ATCGAGGGGGCTGCGAGA 62.842 66.667 0.00 0.00 37.48 4.04
29 30 3.798954 GAATCGAGGGGGCTGCGAG 62.799 68.421 0.00 0.00 37.48 5.03
30 31 3.849951 GAATCGAGGGGGCTGCGA 61.850 66.667 0.00 0.00 38.51 5.10
31 32 4.918201 GGAATCGAGGGGGCTGCG 62.918 72.222 0.00 0.00 0.00 5.18
32 33 2.631012 ATTGGAATCGAGGGGGCTGC 62.631 60.000 0.00 0.00 0.00 5.25
33 34 0.536006 GATTGGAATCGAGGGGGCTG 60.536 60.000 0.00 0.00 0.00 4.85
34 35 1.839894 GATTGGAATCGAGGGGGCT 59.160 57.895 0.00 0.00 0.00 5.19
35 36 4.483090 GATTGGAATCGAGGGGGC 57.517 61.111 0.00 0.00 0.00 5.80
43 44 5.215160 CGGATGGATTTTTCGATTGGAATC 58.785 41.667 0.00 0.00 33.85 2.52
44 45 4.499696 GCGGATGGATTTTTCGATTGGAAT 60.500 41.667 0.00 0.00 33.85 3.01
45 46 3.181491 GCGGATGGATTTTTCGATTGGAA 60.181 43.478 0.00 0.00 0.00 3.53
46 47 2.357637 GCGGATGGATTTTTCGATTGGA 59.642 45.455 0.00 0.00 0.00 3.53
47 48 2.098934 TGCGGATGGATTTTTCGATTGG 59.901 45.455 0.00 0.00 0.00 3.16
48 49 3.065233 TCTGCGGATGGATTTTTCGATTG 59.935 43.478 0.00 0.00 0.00 2.67
49 50 3.278574 TCTGCGGATGGATTTTTCGATT 58.721 40.909 0.00 0.00 0.00 3.34
50 51 2.917933 TCTGCGGATGGATTTTTCGAT 58.082 42.857 0.00 0.00 0.00 3.59
51 52 2.394930 TCTGCGGATGGATTTTTCGA 57.605 45.000 0.00 0.00 0.00 3.71
52 53 2.161410 TGTTCTGCGGATGGATTTTTCG 59.839 45.455 0.00 0.00 0.00 3.46
53 54 3.428045 CCTGTTCTGCGGATGGATTTTTC 60.428 47.826 0.00 0.00 0.00 2.29
54 55 2.493278 CCTGTTCTGCGGATGGATTTTT 59.507 45.455 0.00 0.00 0.00 1.94
55 56 2.094675 CCTGTTCTGCGGATGGATTTT 58.905 47.619 0.00 0.00 0.00 1.82
56 57 1.755179 CCTGTTCTGCGGATGGATTT 58.245 50.000 0.00 0.00 0.00 2.17
57 58 0.749454 GCCTGTTCTGCGGATGGATT 60.749 55.000 12.26 0.00 0.00 3.01
58 59 1.153086 GCCTGTTCTGCGGATGGAT 60.153 57.895 12.26 0.00 0.00 3.41
59 60 2.268920 GCCTGTTCTGCGGATGGA 59.731 61.111 12.26 0.00 0.00 3.41
66 67 0.249238 AGATCGATCGCCTGTTCTGC 60.249 55.000 19.33 0.00 0.00 4.26
67 68 2.215907 AAGATCGATCGCCTGTTCTG 57.784 50.000 19.33 0.00 0.00 3.02
68 69 2.969628 AAAGATCGATCGCCTGTTCT 57.030 45.000 19.33 4.54 0.00 3.01
69 70 2.473235 GCTAAAGATCGATCGCCTGTTC 59.527 50.000 19.33 2.23 0.00 3.18
70 71 2.101582 AGCTAAAGATCGATCGCCTGTT 59.898 45.455 19.33 11.80 0.00 3.16
71 72 1.683917 AGCTAAAGATCGATCGCCTGT 59.316 47.619 19.33 7.70 0.00 4.00
72 73 2.057316 CAGCTAAAGATCGATCGCCTG 58.943 52.381 19.33 16.39 0.00 4.85
73 74 1.683917 ACAGCTAAAGATCGATCGCCT 59.316 47.619 19.33 7.14 0.00 5.52
74 75 2.141535 ACAGCTAAAGATCGATCGCC 57.858 50.000 19.33 4.66 0.00 5.54
75 76 2.348032 GCAACAGCTAAAGATCGATCGC 60.348 50.000 19.33 15.99 0.00 4.58
76 77 2.097685 CGCAACAGCTAAAGATCGATCG 60.098 50.000 19.33 9.36 0.00 3.69
77 78 3.116300 TCGCAACAGCTAAAGATCGATC 58.884 45.455 17.91 17.91 0.00 3.69
78 79 3.119291 CTCGCAACAGCTAAAGATCGAT 58.881 45.455 0.00 0.00 0.00 3.59
79 80 2.094700 ACTCGCAACAGCTAAAGATCGA 60.095 45.455 0.00 0.00 0.00 3.59
80 81 2.263077 ACTCGCAACAGCTAAAGATCG 58.737 47.619 0.00 0.00 0.00 3.69
81 82 2.280183 CGACTCGCAACAGCTAAAGATC 59.720 50.000 0.00 0.00 0.00 2.75
82 83 2.263077 CGACTCGCAACAGCTAAAGAT 58.737 47.619 0.00 0.00 0.00 2.40
83 84 1.698165 CGACTCGCAACAGCTAAAGA 58.302 50.000 0.00 0.00 0.00 2.52
96 97 4.493747 GGGGAGGTTCGCGACTCG 62.494 72.222 9.15 0.00 40.15 4.18
97 98 4.144703 GGGGGAGGTTCGCGACTC 62.145 72.222 9.15 13.68 0.00 3.36
98 99 4.698625 AGGGGGAGGTTCGCGACT 62.699 66.667 9.15 2.75 0.00 4.18
99 100 3.660732 GAAGGGGGAGGTTCGCGAC 62.661 68.421 9.15 3.93 0.00 5.19
100 101 3.387947 GAAGGGGGAGGTTCGCGA 61.388 66.667 3.71 3.71 0.00 5.87
101 102 4.814294 CGAAGGGGGAGGTTCGCG 62.814 72.222 0.00 0.00 39.15 5.87
104 105 0.036294 CTTGACGAAGGGGGAGGTTC 60.036 60.000 0.00 0.00 0.00 3.62
105 106 1.489560 CCTTGACGAAGGGGGAGGTT 61.490 60.000 0.00 0.00 44.76 3.50
106 107 1.918800 CCTTGACGAAGGGGGAGGT 60.919 63.158 0.00 0.00 44.76 3.85
107 108 2.990479 CCTTGACGAAGGGGGAGG 59.010 66.667 0.00 0.00 44.76 4.30
114 115 1.429148 GGGCGCATACCTTGACGAAG 61.429 60.000 10.83 0.00 0.00 3.79
115 116 1.448893 GGGCGCATACCTTGACGAA 60.449 57.895 10.83 0.00 0.00 3.85
116 117 2.185867 GGGCGCATACCTTGACGA 59.814 61.111 10.83 0.00 0.00 4.20
117 118 3.261951 CGGGCGCATACCTTGACG 61.262 66.667 10.83 0.00 0.00 4.35
118 119 2.638330 TAGCGGGCGCATACCTTGAC 62.638 60.000 10.83 0.00 44.88 3.18
119 120 1.754380 ATAGCGGGCGCATACCTTGA 61.754 55.000 10.83 0.00 44.88 3.02
120 121 1.291877 GATAGCGGGCGCATACCTTG 61.292 60.000 10.83 0.00 44.88 3.61
121 122 1.004918 GATAGCGGGCGCATACCTT 60.005 57.895 10.83 0.00 44.88 3.50
122 123 2.657237 GATAGCGGGCGCATACCT 59.343 61.111 10.83 1.67 44.88 3.08
123 124 2.809601 CGATAGCGGGCGCATACC 60.810 66.667 10.83 0.00 44.88 2.73
141 142 1.606601 GGCTTGGGGAACAGGGAAC 60.607 63.158 0.00 0.00 0.00 3.62
142 143 2.851045 GGCTTGGGGAACAGGGAA 59.149 61.111 0.00 0.00 0.00 3.97
143 144 3.646715 CGGCTTGGGGAACAGGGA 61.647 66.667 0.00 0.00 0.00 4.20
144 145 4.740822 CCGGCTTGGGGAACAGGG 62.741 72.222 0.00 0.00 0.00 4.45
146 147 4.351054 AGCCGGCTTGGGGAACAG 62.351 66.667 27.08 0.00 38.63 3.16
147 148 4.659172 CAGCCGGCTTGGGGAACA 62.659 66.667 30.60 0.00 38.63 3.18
148 149 4.660938 ACAGCCGGCTTGGGGAAC 62.661 66.667 30.60 0.00 38.63 3.62
149 150 3.860930 GAACAGCCGGCTTGGGGAA 62.861 63.158 30.60 0.00 38.63 3.97
150 151 4.344865 GAACAGCCGGCTTGGGGA 62.345 66.667 30.60 0.00 38.63 4.81
151 152 3.944250 ATGAACAGCCGGCTTGGGG 62.944 63.158 30.60 18.94 38.63 4.96
152 153 2.361610 ATGAACAGCCGGCTTGGG 60.362 61.111 30.60 19.36 38.63 4.12
153 154 2.879907 CATGAACAGCCGGCTTGG 59.120 61.111 30.60 20.22 42.50 3.61
154 155 2.180017 GCATGAACAGCCGGCTTG 59.820 61.111 30.60 23.65 0.00 4.01
155 156 3.064324 GGCATGAACAGCCGGCTT 61.064 61.111 30.60 14.92 43.15 4.35
161 162 1.089920 AATCTCACGGCATGAACAGC 58.910 50.000 0.00 0.00 36.69 4.40
162 163 1.399440 CCAATCTCACGGCATGAACAG 59.601 52.381 0.00 0.00 36.69 3.16
163 164 1.271325 ACCAATCTCACGGCATGAACA 60.271 47.619 0.00 0.00 36.69 3.18
164 165 1.398390 GACCAATCTCACGGCATGAAC 59.602 52.381 0.00 0.00 36.69 3.18
165 166 1.278985 AGACCAATCTCACGGCATGAA 59.721 47.619 0.00 0.00 36.69 2.57
166 167 0.904649 AGACCAATCTCACGGCATGA 59.095 50.000 0.00 0.00 35.45 3.07
167 168 2.101415 TCTAGACCAATCTCACGGCATG 59.899 50.000 0.00 0.00 36.29 4.06
168 169 2.388735 TCTAGACCAATCTCACGGCAT 58.611 47.619 0.00 0.00 36.29 4.40
169 170 1.847328 TCTAGACCAATCTCACGGCA 58.153 50.000 0.00 0.00 36.29 5.69
170 171 2.625790 AGATCTAGACCAATCTCACGGC 59.374 50.000 0.00 0.00 36.29 5.68
171 172 3.551863 GCAGATCTAGACCAATCTCACGG 60.552 52.174 0.00 0.00 36.29 4.94
172 173 3.067320 TGCAGATCTAGACCAATCTCACG 59.933 47.826 0.00 0.00 36.29 4.35
173 174 4.099266 ACTGCAGATCTAGACCAATCTCAC 59.901 45.833 23.35 0.00 36.29 3.51
174 175 4.285020 ACTGCAGATCTAGACCAATCTCA 58.715 43.478 23.35 0.00 36.29 3.27
175 176 4.935352 ACTGCAGATCTAGACCAATCTC 57.065 45.455 23.35 0.00 36.29 2.75
176 177 5.424895 AGAAACTGCAGATCTAGACCAATCT 59.575 40.000 23.35 1.73 39.15 2.40
177 178 5.523188 CAGAAACTGCAGATCTAGACCAATC 59.477 44.000 23.35 0.00 0.00 2.67
178 179 5.046014 ACAGAAACTGCAGATCTAGACCAAT 60.046 40.000 23.35 0.00 34.37 3.16
179 180 4.284490 ACAGAAACTGCAGATCTAGACCAA 59.716 41.667 23.35 0.00 34.37 3.67
180 181 3.834813 ACAGAAACTGCAGATCTAGACCA 59.165 43.478 23.35 0.00 34.37 4.02
181 182 4.464069 ACAGAAACTGCAGATCTAGACC 57.536 45.455 23.35 0.37 34.37 3.85
182 183 6.443934 TCTACAGAAACTGCAGATCTAGAC 57.556 41.667 23.35 4.37 29.92 2.59
183 184 7.652524 AATCTACAGAAACTGCAGATCTAGA 57.347 36.000 23.35 20.76 41.94 2.43
184 185 7.763528 ACAAATCTACAGAAACTGCAGATCTAG 59.236 37.037 23.35 16.75 41.94 2.43
185 186 7.547019 CACAAATCTACAGAAACTGCAGATCTA 59.453 37.037 23.35 8.60 41.94 1.98
186 187 6.370994 CACAAATCTACAGAAACTGCAGATCT 59.629 38.462 23.35 19.64 41.94 2.75
187 188 6.148480 ACACAAATCTACAGAAACTGCAGATC 59.852 38.462 23.35 17.65 41.94 2.75
188 189 6.000219 ACACAAATCTACAGAAACTGCAGAT 59.000 36.000 23.35 5.41 43.88 2.90
189 190 5.368145 ACACAAATCTACAGAAACTGCAGA 58.632 37.500 23.35 4.50 38.12 4.26
190 191 5.679734 ACACAAATCTACAGAAACTGCAG 57.320 39.130 13.48 13.48 34.37 4.41
191 192 6.521162 TCTACACAAATCTACAGAAACTGCA 58.479 36.000 0.00 0.00 34.37 4.41
192 193 7.463383 CGATCTACACAAATCTACAGAAACTGC 60.463 40.741 0.00 0.00 34.37 4.40
193 194 7.755373 TCGATCTACACAAATCTACAGAAACTG 59.245 37.037 0.00 0.00 37.52 3.16
194 195 7.827701 TCGATCTACACAAATCTACAGAAACT 58.172 34.615 0.00 0.00 0.00 2.66
195 196 8.635877 ATCGATCTACACAAATCTACAGAAAC 57.364 34.615 0.00 0.00 0.00 2.78
212 213 9.027129 CGGTCTACAAACAAATTAATCGATCTA 57.973 33.333 0.00 0.00 0.00 1.98
213 214 7.011109 CCGGTCTACAAACAAATTAATCGATCT 59.989 37.037 0.00 0.00 0.00 2.75
214 215 7.123830 CCGGTCTACAAACAAATTAATCGATC 58.876 38.462 0.00 0.00 0.00 3.69
215 216 6.596497 ACCGGTCTACAAACAAATTAATCGAT 59.404 34.615 0.00 0.00 0.00 3.59
216 217 5.933463 ACCGGTCTACAAACAAATTAATCGA 59.067 36.000 0.00 0.00 0.00 3.59
217 218 6.019152 CACCGGTCTACAAACAAATTAATCG 58.981 40.000 2.59 0.00 0.00 3.34
218 219 6.149807 TCCACCGGTCTACAAACAAATTAATC 59.850 38.462 2.59 0.00 0.00 1.75
219 220 6.005198 TCCACCGGTCTACAAACAAATTAAT 58.995 36.000 2.59 0.00 0.00 1.40
220 221 5.374921 TCCACCGGTCTACAAACAAATTAA 58.625 37.500 2.59 0.00 0.00 1.40
221 222 4.970711 TCCACCGGTCTACAAACAAATTA 58.029 39.130 2.59 0.00 0.00 1.40
222 223 3.822940 TCCACCGGTCTACAAACAAATT 58.177 40.909 2.59 0.00 0.00 1.82
223 224 3.495434 TCCACCGGTCTACAAACAAAT 57.505 42.857 2.59 0.00 0.00 2.32
224 225 3.495434 ATCCACCGGTCTACAAACAAA 57.505 42.857 2.59 0.00 0.00 2.83
225 226 3.495434 AATCCACCGGTCTACAAACAA 57.505 42.857 2.59 0.00 0.00 2.83
226 227 3.495434 AAATCCACCGGTCTACAAACA 57.505 42.857 2.59 0.00 0.00 2.83
227 228 4.317488 TGTAAATCCACCGGTCTACAAAC 58.683 43.478 2.59 0.00 0.00 2.93
228 229 4.620589 TGTAAATCCACCGGTCTACAAA 57.379 40.909 2.59 0.00 0.00 2.83
229 230 4.620589 TTGTAAATCCACCGGTCTACAA 57.379 40.909 2.59 10.95 0.00 2.41
230 231 4.283978 TCTTTGTAAATCCACCGGTCTACA 59.716 41.667 2.59 5.02 0.00 2.74
231 232 4.824289 TCTTTGTAAATCCACCGGTCTAC 58.176 43.478 2.59 2.21 0.00 2.59
232 233 5.667466 GATCTTTGTAAATCCACCGGTCTA 58.333 41.667 2.59 0.00 0.00 2.59
233 234 4.514401 GATCTTTGTAAATCCACCGGTCT 58.486 43.478 2.59 0.00 0.00 3.85
234 235 3.308866 CGATCTTTGTAAATCCACCGGTC 59.691 47.826 2.59 0.00 0.00 4.79
235 236 3.055675 TCGATCTTTGTAAATCCACCGGT 60.056 43.478 0.00 0.00 0.00 5.28
236 237 3.527533 TCGATCTTTGTAAATCCACCGG 58.472 45.455 0.00 0.00 0.00 5.28
237 238 4.181578 ACTCGATCTTTGTAAATCCACCG 58.818 43.478 0.00 0.00 0.00 4.94
238 239 7.787725 ATAACTCGATCTTTGTAAATCCACC 57.212 36.000 0.00 0.00 0.00 4.61
239 240 8.665685 ACAATAACTCGATCTTTGTAAATCCAC 58.334 33.333 0.00 0.00 0.00 4.02
240 241 8.786826 ACAATAACTCGATCTTTGTAAATCCA 57.213 30.769 0.00 0.00 0.00 3.41
241 242 9.490663 CAACAATAACTCGATCTTTGTAAATCC 57.509 33.333 0.00 0.00 30.76 3.01
242 243 9.490663 CCAACAATAACTCGATCTTTGTAAATC 57.509 33.333 0.00 0.00 30.76 2.17
243 244 8.458843 CCCAACAATAACTCGATCTTTGTAAAT 58.541 33.333 0.00 0.00 30.76 1.40
244 245 7.574217 GCCCAACAATAACTCGATCTTTGTAAA 60.574 37.037 0.00 0.00 30.76 2.01
245 246 6.128117 GCCCAACAATAACTCGATCTTTGTAA 60.128 38.462 0.00 0.00 30.76 2.41
246 247 5.353123 GCCCAACAATAACTCGATCTTTGTA 59.647 40.000 0.00 0.00 30.76 2.41
247 248 4.156008 GCCCAACAATAACTCGATCTTTGT 59.844 41.667 0.00 0.00 32.19 2.83
248 249 4.155826 TGCCCAACAATAACTCGATCTTTG 59.844 41.667 0.00 0.00 0.00 2.77
249 250 4.156008 GTGCCCAACAATAACTCGATCTTT 59.844 41.667 0.00 0.00 0.00 2.52
250 251 3.689649 GTGCCCAACAATAACTCGATCTT 59.310 43.478 0.00 0.00 0.00 2.40
251 252 3.270877 GTGCCCAACAATAACTCGATCT 58.729 45.455 0.00 0.00 0.00 2.75
252 253 2.030457 CGTGCCCAACAATAACTCGATC 59.970 50.000 0.00 0.00 0.00 3.69
253 254 2.006888 CGTGCCCAACAATAACTCGAT 58.993 47.619 0.00 0.00 0.00 3.59
254 255 1.001068 TCGTGCCCAACAATAACTCGA 59.999 47.619 0.00 0.00 0.00 4.04
255 256 1.393539 CTCGTGCCCAACAATAACTCG 59.606 52.381 0.00 0.00 0.00 4.18
256 257 2.159627 CACTCGTGCCCAACAATAACTC 59.840 50.000 0.00 0.00 0.00 3.01
257 258 2.151202 CACTCGTGCCCAACAATAACT 58.849 47.619 0.00 0.00 0.00 2.24
258 259 1.199097 CCACTCGTGCCCAACAATAAC 59.801 52.381 0.00 0.00 0.00 1.89
259 260 1.529226 CCACTCGTGCCCAACAATAA 58.471 50.000 0.00 0.00 0.00 1.40
260 261 0.958382 GCCACTCGTGCCCAACAATA 60.958 55.000 0.00 0.00 0.00 1.90
261 262 2.268076 GCCACTCGTGCCCAACAAT 61.268 57.895 0.00 0.00 0.00 2.71
262 263 2.904866 GCCACTCGTGCCCAACAA 60.905 61.111 0.00 0.00 0.00 2.83
263 264 3.872603 AGCCACTCGTGCCCAACA 61.873 61.111 0.00 0.00 0.00 3.33
264 265 2.725203 TACAGCCACTCGTGCCCAAC 62.725 60.000 0.00 0.00 0.00 3.77
265 266 1.836999 ATACAGCCACTCGTGCCCAA 61.837 55.000 0.00 0.00 0.00 4.12
266 267 1.836999 AATACAGCCACTCGTGCCCA 61.837 55.000 0.00 0.00 0.00 5.36
267 268 0.177141 TAATACAGCCACTCGTGCCC 59.823 55.000 0.00 0.00 0.00 5.36
268 269 2.135933 GATAATACAGCCACTCGTGCC 58.864 52.381 0.00 0.00 0.00 5.01
269 270 2.797156 CAGATAATACAGCCACTCGTGC 59.203 50.000 0.00 0.00 0.00 5.34
270 271 3.384668 CCAGATAATACAGCCACTCGTG 58.615 50.000 0.00 0.00 0.00 4.35
271 272 2.365617 CCCAGATAATACAGCCACTCGT 59.634 50.000 0.00 0.00 0.00 4.18
272 273 2.365617 ACCCAGATAATACAGCCACTCG 59.634 50.000 0.00 0.00 0.00 4.18
273 274 5.746990 ATACCCAGATAATACAGCCACTC 57.253 43.478 0.00 0.00 0.00 3.51
274 275 7.814693 AATATACCCAGATAATACAGCCACT 57.185 36.000 0.00 0.00 0.00 4.00
303 304 9.650539 CCATCAGGATACATGAAATCTACTTAG 57.349 37.037 0.00 0.00 41.41 2.18
304 305 9.159254 ACCATCAGGATACATGAAATCTACTTA 57.841 33.333 0.00 0.00 38.69 2.24
305 306 8.038862 ACCATCAGGATACATGAAATCTACTT 57.961 34.615 0.00 0.00 38.69 2.24
306 307 7.256475 GGACCATCAGGATACATGAAATCTACT 60.256 40.741 0.00 0.00 38.69 2.57
307 308 6.876257 GGACCATCAGGATACATGAAATCTAC 59.124 42.308 0.00 0.00 38.69 2.59
308 309 6.558394 TGGACCATCAGGATACATGAAATCTA 59.442 38.462 0.00 0.00 38.69 1.98
309 310 5.370584 TGGACCATCAGGATACATGAAATCT 59.629 40.000 0.00 0.00 38.69 2.40
310 311 5.624159 TGGACCATCAGGATACATGAAATC 58.376 41.667 0.00 1.79 38.69 2.17
311 312 5.651612 TGGACCATCAGGATACATGAAAT 57.348 39.130 0.00 0.00 38.69 2.17
312 313 5.103982 ACATGGACCATCAGGATACATGAAA 60.104 40.000 3.21 0.00 41.61 2.69
313 314 4.413189 ACATGGACCATCAGGATACATGAA 59.587 41.667 3.21 0.00 41.61 2.57
314 315 3.975982 ACATGGACCATCAGGATACATGA 59.024 43.478 3.21 0.00 41.61 3.07
315 316 4.362470 ACATGGACCATCAGGATACATG 57.638 45.455 3.21 0.00 43.06 3.21
316 317 5.406163 TCTACATGGACCATCAGGATACAT 58.594 41.667 3.21 0.00 38.69 2.29
317 318 4.814967 TCTACATGGACCATCAGGATACA 58.185 43.478 3.21 0.00 38.69 2.29
318 319 4.835615 ACTCTACATGGACCATCAGGATAC 59.164 45.833 3.21 0.00 38.69 2.24
319 320 5.079998 ACTCTACATGGACCATCAGGATA 57.920 43.478 3.21 0.00 38.69 2.59
320 321 3.933886 ACTCTACATGGACCATCAGGAT 58.066 45.455 3.21 0.00 38.69 3.24
321 322 3.404869 ACTCTACATGGACCATCAGGA 57.595 47.619 3.21 2.08 38.69 3.86
322 323 3.198635 ACAACTCTACATGGACCATCAGG 59.801 47.826 3.21 0.00 42.21 3.86
323 324 4.478206 ACAACTCTACATGGACCATCAG 57.522 45.455 3.21 5.15 0.00 2.90
324 325 4.565444 CCAACAACTCTACATGGACCATCA 60.565 45.833 3.21 0.00 32.82 3.07
325 326 3.941483 CCAACAACTCTACATGGACCATC 59.059 47.826 3.21 0.00 32.82 3.51
326 327 3.330701 ACCAACAACTCTACATGGACCAT 59.669 43.478 0.00 0.00 35.16 3.55
327 328 2.708861 ACCAACAACTCTACATGGACCA 59.291 45.455 0.00 0.00 35.16 4.02
328 329 3.418684 ACCAACAACTCTACATGGACC 57.581 47.619 0.00 0.00 35.16 4.46
329 330 5.790593 TCTAACCAACAACTCTACATGGAC 58.209 41.667 0.00 0.00 35.16 4.02
330 331 6.428083 TTCTAACCAACAACTCTACATGGA 57.572 37.500 0.00 0.00 35.16 3.41
331 332 7.687941 AATTCTAACCAACAACTCTACATGG 57.312 36.000 0.00 0.00 37.19 3.66
332 333 9.965824 AAAAATTCTAACCAACAACTCTACATG 57.034 29.630 0.00 0.00 0.00 3.21
335 336 9.888878 GGTAAAAATTCTAACCAACAACTCTAC 57.111 33.333 0.00 0.00 32.04 2.59
336 337 8.776470 CGGTAAAAATTCTAACCAACAACTCTA 58.224 33.333 4.51 0.00 32.04 2.43
337 338 7.499895 TCGGTAAAAATTCTAACCAACAACTCT 59.500 33.333 4.51 0.00 32.04 3.24
338 339 7.641760 TCGGTAAAAATTCTAACCAACAACTC 58.358 34.615 4.51 0.00 32.04 3.01
339 340 7.571080 TCGGTAAAAATTCTAACCAACAACT 57.429 32.000 4.51 0.00 32.04 3.16
340 341 9.550811 CTATCGGTAAAAATTCTAACCAACAAC 57.449 33.333 4.51 0.00 32.04 3.32
341 342 9.287373 ACTATCGGTAAAAATTCTAACCAACAA 57.713 29.630 4.51 0.00 32.04 2.83
342 343 8.851541 ACTATCGGTAAAAATTCTAACCAACA 57.148 30.769 4.51 0.00 32.04 3.33
343 344 9.159364 AGACTATCGGTAAAAATTCTAACCAAC 57.841 33.333 4.51 0.00 32.04 3.77
344 345 9.374838 GAGACTATCGGTAAAAATTCTAACCAA 57.625 33.333 4.51 0.00 32.04 3.67
345 346 8.937634 GAGACTATCGGTAAAAATTCTAACCA 57.062 34.615 4.51 0.00 32.04 3.67
362 363 2.871182 TGACCATGTGCGAGACTATC 57.129 50.000 0.00 0.00 0.00 2.08
363 364 2.036475 GGATGACCATGTGCGAGACTAT 59.964 50.000 0.00 0.00 35.97 2.12
364 365 1.409064 GGATGACCATGTGCGAGACTA 59.591 52.381 0.00 0.00 35.97 2.59
365 366 0.176680 GGATGACCATGTGCGAGACT 59.823 55.000 0.00 0.00 35.97 3.24
366 367 0.176680 AGGATGACCATGTGCGAGAC 59.823 55.000 0.00 0.00 38.94 3.36
367 368 0.461548 GAGGATGACCATGTGCGAGA 59.538 55.000 0.00 0.00 38.94 4.04
368 369 0.176449 TGAGGATGACCATGTGCGAG 59.824 55.000 0.00 0.00 38.94 5.03
369 370 0.108186 GTGAGGATGACCATGTGCGA 60.108 55.000 0.00 0.00 38.94 5.10
370 371 0.107993 AGTGAGGATGACCATGTGCG 60.108 55.000 0.00 0.00 38.94 5.34
371 372 2.988010 TAGTGAGGATGACCATGTGC 57.012 50.000 0.00 0.00 38.94 4.57
372 373 5.678583 AGATTTAGTGAGGATGACCATGTG 58.321 41.667 0.00 0.00 38.94 3.21
373 374 5.163258 GGAGATTTAGTGAGGATGACCATGT 60.163 44.000 0.00 0.00 38.94 3.21
374 375 5.303971 GGAGATTTAGTGAGGATGACCATG 58.696 45.833 0.00 0.00 38.94 3.66
375 376 4.039730 CGGAGATTTAGTGAGGATGACCAT 59.960 45.833 0.00 0.00 38.94 3.55
376 377 3.384789 CGGAGATTTAGTGAGGATGACCA 59.615 47.826 0.00 0.00 38.94 4.02
377 378 3.385111 ACGGAGATTTAGTGAGGATGACC 59.615 47.826 0.00 0.00 0.00 4.02
378 379 4.657436 ACGGAGATTTAGTGAGGATGAC 57.343 45.455 0.00 0.00 0.00 3.06
379 380 5.446860 AGTACGGAGATTTAGTGAGGATGA 58.553 41.667 0.00 0.00 0.00 2.92
380 381 5.776173 AGTACGGAGATTTAGTGAGGATG 57.224 43.478 0.00 0.00 0.00 3.51
381 382 6.608002 AGAAAGTACGGAGATTTAGTGAGGAT 59.392 38.462 0.00 0.00 0.00 3.24
382 383 5.950549 AGAAAGTACGGAGATTTAGTGAGGA 59.049 40.000 0.00 0.00 0.00 3.71
383 384 6.037098 CAGAAAGTACGGAGATTTAGTGAGG 58.963 44.000 0.00 0.00 0.00 3.86
384 385 5.517054 GCAGAAAGTACGGAGATTTAGTGAG 59.483 44.000 0.00 0.00 0.00 3.51
385 386 5.185249 AGCAGAAAGTACGGAGATTTAGTGA 59.815 40.000 0.00 0.00 0.00 3.41
386 387 5.411781 AGCAGAAAGTACGGAGATTTAGTG 58.588 41.667 0.00 0.00 0.00 2.74
387 388 5.662674 AGCAGAAAGTACGGAGATTTAGT 57.337 39.130 0.00 0.00 0.00 2.24
388 389 8.649973 AATTAGCAGAAAGTACGGAGATTTAG 57.350 34.615 0.00 0.00 0.00 1.85
389 390 8.879759 CAAATTAGCAGAAAGTACGGAGATTTA 58.120 33.333 0.00 0.00 0.00 1.40
390 391 7.148239 CCAAATTAGCAGAAAGTACGGAGATTT 60.148 37.037 0.00 0.00 0.00 2.17
391 392 6.316390 CCAAATTAGCAGAAAGTACGGAGATT 59.684 38.462 0.00 0.00 0.00 2.40
392 393 5.817816 CCAAATTAGCAGAAAGTACGGAGAT 59.182 40.000 0.00 0.00 0.00 2.75
393 394 5.046878 TCCAAATTAGCAGAAAGTACGGAGA 60.047 40.000 0.00 0.00 0.00 3.71
394 395 5.175859 TCCAAATTAGCAGAAAGTACGGAG 58.824 41.667 0.00 0.00 0.00 4.63
395 396 5.155278 TCCAAATTAGCAGAAAGTACGGA 57.845 39.130 0.00 0.00 0.00 4.69
396 397 6.258160 CAATCCAAATTAGCAGAAAGTACGG 58.742 40.000 0.00 0.00 0.00 4.02
397 398 5.739161 GCAATCCAAATTAGCAGAAAGTACG 59.261 40.000 0.00 0.00 0.00 3.67
398 399 6.036470 GGCAATCCAAATTAGCAGAAAGTAC 58.964 40.000 0.00 0.00 0.00 2.73
399 400 5.163663 CGGCAATCCAAATTAGCAGAAAGTA 60.164 40.000 0.00 0.00 0.00 2.24
400 401 4.380867 CGGCAATCCAAATTAGCAGAAAGT 60.381 41.667 0.00 0.00 0.00 2.66
401 402 4.107622 CGGCAATCCAAATTAGCAGAAAG 58.892 43.478 0.00 0.00 0.00 2.62
402 403 3.761218 TCGGCAATCCAAATTAGCAGAAA 59.239 39.130 0.00 0.00 0.00 2.52
403 404 3.351740 TCGGCAATCCAAATTAGCAGAA 58.648 40.909 0.00 0.00 0.00 3.02
404 405 2.997980 TCGGCAATCCAAATTAGCAGA 58.002 42.857 0.00 0.00 0.00 4.26
405 406 3.129287 ACTTCGGCAATCCAAATTAGCAG 59.871 43.478 0.00 0.00 0.00 4.24
406 407 3.088532 ACTTCGGCAATCCAAATTAGCA 58.911 40.909 0.00 0.00 0.00 3.49
407 408 3.782889 ACTTCGGCAATCCAAATTAGC 57.217 42.857 0.00 0.00 0.00 3.09
408 409 4.260620 CGGTACTTCGGCAATCCAAATTAG 60.261 45.833 0.00 0.00 0.00 1.73
409 410 3.623960 CGGTACTTCGGCAATCCAAATTA 59.376 43.478 0.00 0.00 0.00 1.40
410 411 2.422127 CGGTACTTCGGCAATCCAAATT 59.578 45.455 0.00 0.00 0.00 1.82
411 412 2.014128 CGGTACTTCGGCAATCCAAAT 58.986 47.619 0.00 0.00 0.00 2.32
412 413 1.002201 TCGGTACTTCGGCAATCCAAA 59.998 47.619 0.00 0.00 0.00 3.28
413 414 0.609151 TCGGTACTTCGGCAATCCAA 59.391 50.000 0.00 0.00 0.00 3.53
414 415 0.828022 ATCGGTACTTCGGCAATCCA 59.172 50.000 0.00 0.00 0.00 3.41
415 416 2.673833 CTATCGGTACTTCGGCAATCC 58.326 52.381 0.00 0.00 0.00 3.01
416 417 2.059541 GCTATCGGTACTTCGGCAATC 58.940 52.381 0.00 0.00 0.00 2.67
417 418 1.270147 GGCTATCGGTACTTCGGCAAT 60.270 52.381 0.00 0.00 0.00 3.56
418 419 0.103572 GGCTATCGGTACTTCGGCAA 59.896 55.000 0.00 0.00 0.00 4.52
419 420 0.754217 AGGCTATCGGTACTTCGGCA 60.754 55.000 0.00 0.00 0.00 5.69
420 421 0.388294 AAGGCTATCGGTACTTCGGC 59.612 55.000 0.00 0.00 0.00 5.54
421 422 2.620115 TGTAAGGCTATCGGTACTTCGG 59.380 50.000 0.00 0.00 0.00 4.30
422 423 3.976793 TGTAAGGCTATCGGTACTTCG 57.023 47.619 0.00 0.00 0.00 3.79
423 424 4.989168 CCAATGTAAGGCTATCGGTACTTC 59.011 45.833 0.00 0.00 0.00 3.01
424 425 4.652421 TCCAATGTAAGGCTATCGGTACTT 59.348 41.667 0.00 0.00 0.00 2.24
425 426 4.220724 TCCAATGTAAGGCTATCGGTACT 58.779 43.478 0.00 0.00 0.00 2.73
426 427 4.595762 TCCAATGTAAGGCTATCGGTAC 57.404 45.455 0.00 0.00 0.00 3.34
427 428 5.617528 TTTCCAATGTAAGGCTATCGGTA 57.382 39.130 0.00 0.00 0.00 4.02
428 429 4.497291 TTTCCAATGTAAGGCTATCGGT 57.503 40.909 0.00 0.00 0.00 4.69
429 430 6.464222 TCTATTTCCAATGTAAGGCTATCGG 58.536 40.000 0.00 0.00 0.00 4.18
430 431 7.819415 TGATCTATTTCCAATGTAAGGCTATCG 59.181 37.037 0.00 0.00 0.00 2.92
431 432 9.678260 ATGATCTATTTCCAATGTAAGGCTATC 57.322 33.333 0.00 0.00 0.00 2.08
432 433 9.678260 GATGATCTATTTCCAATGTAAGGCTAT 57.322 33.333 0.00 0.00 0.00 2.97
433 434 7.819415 CGATGATCTATTTCCAATGTAAGGCTA 59.181 37.037 0.00 0.00 0.00 3.93
434 435 6.652481 CGATGATCTATTTCCAATGTAAGGCT 59.348 38.462 0.00 0.00 0.00 4.58
435 436 6.621596 GCGATGATCTATTTCCAATGTAAGGC 60.622 42.308 0.00 0.00 0.00 4.35
436 437 6.128172 GGCGATGATCTATTTCCAATGTAAGG 60.128 42.308 0.00 0.00 0.00 2.69
437 438 6.401474 CGGCGATGATCTATTTCCAATGTAAG 60.401 42.308 0.00 0.00 0.00 2.34
438 439 5.408299 CGGCGATGATCTATTTCCAATGTAA 59.592 40.000 0.00 0.00 0.00 2.41
439 440 4.929211 CGGCGATGATCTATTTCCAATGTA 59.071 41.667 0.00 0.00 0.00 2.29
440 441 3.748048 CGGCGATGATCTATTTCCAATGT 59.252 43.478 0.00 0.00 0.00 2.71
441 442 3.748048 ACGGCGATGATCTATTTCCAATG 59.252 43.478 16.62 0.00 0.00 2.82
442 443 3.997021 GACGGCGATGATCTATTTCCAAT 59.003 43.478 16.62 0.00 0.00 3.16
443 444 3.390135 GACGGCGATGATCTATTTCCAA 58.610 45.455 16.62 0.00 0.00 3.53
444 445 2.288825 GGACGGCGATGATCTATTTCCA 60.289 50.000 16.62 0.00 0.00 3.53
445 446 2.288825 TGGACGGCGATGATCTATTTCC 60.289 50.000 16.62 6.38 0.00 3.13
446 447 2.989840 CTGGACGGCGATGATCTATTTC 59.010 50.000 16.62 0.00 0.00 2.17
447 448 2.365617 ACTGGACGGCGATGATCTATTT 59.634 45.455 16.62 0.00 0.00 1.40
448 449 1.964223 ACTGGACGGCGATGATCTATT 59.036 47.619 16.62 0.00 0.00 1.73
449 450 1.542030 GACTGGACGGCGATGATCTAT 59.458 52.381 16.62 0.00 0.00 1.98
450 451 0.952280 GACTGGACGGCGATGATCTA 59.048 55.000 16.62 0.00 0.00 1.98
451 452 1.736586 GACTGGACGGCGATGATCT 59.263 57.895 16.62 0.00 0.00 2.75
452 453 1.300233 GGACTGGACGGCGATGATC 60.300 63.158 16.62 0.00 0.00 2.92
453 454 1.402896 ATGGACTGGACGGCGATGAT 61.403 55.000 16.62 0.00 0.00 2.45
454 455 2.058001 ATGGACTGGACGGCGATGA 61.058 57.895 16.62 0.00 0.00 2.92
455 456 1.884464 CATGGACTGGACGGCGATG 60.884 63.158 16.62 0.00 0.00 3.84
456 457 2.298158 GACATGGACTGGACGGCGAT 62.298 60.000 16.62 0.00 0.00 4.58
457 458 2.994995 ACATGGACTGGACGGCGA 60.995 61.111 16.62 0.00 0.00 5.54
458 459 2.507110 AAGACATGGACTGGACGGCG 62.507 60.000 4.80 4.80 0.00 6.46
459 460 0.321653 AAAGACATGGACTGGACGGC 60.322 55.000 0.00 0.00 0.00 5.68
460 461 1.270839 ACAAAGACATGGACTGGACGG 60.271 52.381 0.00 0.00 0.00 4.79
461 462 2.069273 GACAAAGACATGGACTGGACG 58.931 52.381 0.00 0.00 0.00 4.79
462 463 3.007398 AGAGACAAAGACATGGACTGGAC 59.993 47.826 0.00 0.00 0.00 4.02
463 464 3.242867 AGAGACAAAGACATGGACTGGA 58.757 45.455 0.00 0.00 0.00 3.86
464 465 3.692257 AGAGACAAAGACATGGACTGG 57.308 47.619 0.00 0.00 0.00 4.00
465 466 6.652481 ACATAAAGAGACAAAGACATGGACTG 59.348 38.462 0.00 0.00 0.00 3.51
466 467 6.773638 ACATAAAGAGACAAAGACATGGACT 58.226 36.000 0.00 0.00 0.00 3.85
467 468 7.819900 AGTACATAAAGAGACAAAGACATGGAC 59.180 37.037 0.00 0.00 0.00 4.02
468 469 7.907389 AGTACATAAAGAGACAAAGACATGGA 58.093 34.615 0.00 0.00 0.00 3.41
469 470 7.819415 TGAGTACATAAAGAGACAAAGACATGG 59.181 37.037 0.00 0.00 0.00 3.66
470 471 8.763049 TGAGTACATAAAGAGACAAAGACATG 57.237 34.615 0.00 0.00 0.00 3.21
472 473 9.856488 GTATGAGTACATAAAGAGACAAAGACA 57.144 33.333 0.00 0.00 40.13 3.41
473 474 9.856488 TGTATGAGTACATAAAGAGACAAAGAC 57.144 33.333 0.00 0.00 40.13 3.01
474 475 9.856488 GTGTATGAGTACATAAAGAGACAAAGA 57.144 33.333 0.00 0.00 42.43 2.52
475 476 9.639601 TGTGTATGAGTACATAAAGAGACAAAG 57.360 33.333 0.00 0.00 42.43 2.77
476 477 9.419297 GTGTGTATGAGTACATAAAGAGACAAA 57.581 33.333 0.00 0.00 42.43 2.83
477 478 8.581578 TGTGTGTATGAGTACATAAAGAGACAA 58.418 33.333 0.00 0.00 42.43 3.18
478 479 8.117813 TGTGTGTATGAGTACATAAAGAGACA 57.882 34.615 0.00 0.00 42.43 3.41
479 480 9.239002 GATGTGTGTATGAGTACATAAAGAGAC 57.761 37.037 0.00 0.00 42.43 3.36
480 481 9.190317 AGATGTGTGTATGAGTACATAAAGAGA 57.810 33.333 0.00 0.00 42.43 3.10
485 486 9.403583 TGTCTAGATGTGTGTATGAGTACATAA 57.596 33.333 0.00 0.00 42.43 1.90
486 487 8.974060 TGTCTAGATGTGTGTATGAGTACATA 57.026 34.615 0.00 0.00 42.43 2.29
487 488 7.881775 TGTCTAGATGTGTGTATGAGTACAT 57.118 36.000 0.00 0.00 42.43 2.29
488 489 7.201821 CCATGTCTAGATGTGTGTATGAGTACA 60.202 40.741 0.00 0.00 38.46 2.90
489 490 7.142021 CCATGTCTAGATGTGTGTATGAGTAC 58.858 42.308 0.00 0.00 0.00 2.73
490 491 6.833933 ACCATGTCTAGATGTGTGTATGAGTA 59.166 38.462 0.00 0.00 0.00 2.59
491 492 5.658634 ACCATGTCTAGATGTGTGTATGAGT 59.341 40.000 0.00 0.00 0.00 3.41
492 493 6.154203 ACCATGTCTAGATGTGTGTATGAG 57.846 41.667 0.00 0.00 0.00 2.90
503 504 2.770802 AGCAGAGCAACCATGTCTAGAT 59.229 45.455 0.00 0.00 0.00 1.98
505 506 2.093816 TGAGCAGAGCAACCATGTCTAG 60.094 50.000 0.00 0.00 0.00 2.43
536 537 7.602517 ATCTGCAGTTGAATGTTAGTACTTC 57.397 36.000 14.67 0.00 0.00 3.01
537 538 7.986085 AATCTGCAGTTGAATGTTAGTACTT 57.014 32.000 14.67 0.00 0.00 2.24
539 540 8.936864 AGTAAATCTGCAGTTGAATGTTAGTAC 58.063 33.333 14.67 4.21 0.00 2.73
541 542 7.986085 AGTAAATCTGCAGTTGAATGTTAGT 57.014 32.000 14.67 1.11 0.00 2.24
570 571 8.592809 GGAGTGAGATGGTCTAAATCTTATGAT 58.407 37.037 0.00 0.00 34.50 2.45
573 574 7.470702 CGTGGAGTGAGATGGTCTAAATCTTAT 60.471 40.741 0.00 0.00 34.50 1.73
600 601 6.396450 TGAAGAGATCAACTGAGTCATGAAG 58.604 40.000 0.00 0.00 34.30 3.02
632 633 7.173907 GCAATAAGTCAGCTCAACATGGTATAT 59.826 37.037 0.00 0.00 0.00 0.86
641 642 5.113502 ACAAAGCAATAAGTCAGCTCAAC 57.886 39.130 0.00 0.00 37.70 3.18
642 643 5.067674 ACAACAAAGCAATAAGTCAGCTCAA 59.932 36.000 0.00 0.00 37.70 3.02
643 644 4.580167 ACAACAAAGCAATAAGTCAGCTCA 59.420 37.500 0.00 0.00 37.70 4.26
644 645 5.113502 ACAACAAAGCAATAAGTCAGCTC 57.886 39.130 0.00 0.00 37.70 4.09
645 646 5.520376 AACAACAAAGCAATAAGTCAGCT 57.480 34.783 0.00 0.00 41.03 4.24
720 722 4.796038 AATGAACTGGAAGGCAAGAATG 57.204 40.909 0.00 0.00 39.30 2.67
721 723 6.189859 TGATAATGAACTGGAAGGCAAGAAT 58.810 36.000 0.00 0.00 39.30 2.40
722 724 5.569355 TGATAATGAACTGGAAGGCAAGAA 58.431 37.500 0.00 0.00 39.30 2.52
782 784 9.953565 ATAGCAAGTCTAACAAATAACAACCTA 57.046 29.630 0.00 0.00 0.00 3.08
827 829 2.412847 GCAATGAAACACAGACTACGGC 60.413 50.000 0.00 0.00 0.00 5.68
833 835 5.348451 ACAAACAAAGCAATGAAACACAGAC 59.652 36.000 0.00 0.00 0.00 3.51
836 838 6.309980 CAGTACAAACAAAGCAATGAAACACA 59.690 34.615 0.00 0.00 0.00 3.72
837 839 6.310224 ACAGTACAAACAAAGCAATGAAACAC 59.690 34.615 0.00 0.00 0.00 3.32
896 898 6.263617 AGACGAAGACTCTGGTAATCTAATCC 59.736 42.308 0.00 0.00 0.00 3.01
939 941 5.127693 AGCTAGTCAGGCGTATATTCAAG 57.872 43.478 0.00 0.00 34.52 3.02
941 945 5.768662 AGTAAGCTAGTCAGGCGTATATTCA 59.231 40.000 0.00 0.00 34.52 2.57
984 988 2.083002 TGCATCTGCGCAGTTCATAAA 58.917 42.857 34.70 16.06 45.83 1.40
994 998 0.731417 ACAAAGATCTGCATCTGCGC 59.269 50.000 0.00 0.00 45.83 6.09
1023 1027 1.745489 GGTGATGGTCTTGCCGGTC 60.745 63.158 1.90 0.00 41.21 4.79
1284 1288 3.814842 TCACATTGTCAATGGTGTCTGAC 59.185 43.478 25.59 0.00 43.21 3.51
1470 1474 4.134379 TGCAAATCAAACTTCCAAAGCA 57.866 36.364 0.00 0.00 0.00 3.91
1535 1540 5.992829 TGAGCGAAAACAAACATAAGGACTA 59.007 36.000 0.00 0.00 0.00 2.59
1585 1595 1.460504 CACAAGGCAGCATCAGATGT 58.539 50.000 12.18 0.00 32.61 3.06
1586 1596 0.100682 GCACAAGGCAGCATCAGATG 59.899 55.000 5.98 5.98 43.97 2.90
1587 1597 2.490165 GCACAAGGCAGCATCAGAT 58.510 52.632 0.00 0.00 43.97 2.90
1588 1598 3.991999 GCACAAGGCAGCATCAGA 58.008 55.556 0.00 0.00 43.97 3.27
1597 1607 0.450983 GAGATCAAGCTGCACAAGGC 59.549 55.000 1.02 0.00 45.13 4.35
1599 1611 3.336468 AGAAGAGATCAAGCTGCACAAG 58.664 45.455 1.02 0.00 0.00 3.16
1602 1614 4.691175 TCATAGAAGAGATCAAGCTGCAC 58.309 43.478 1.02 0.00 0.00 4.57
1603 1615 5.349061 TTCATAGAAGAGATCAAGCTGCA 57.651 39.130 1.02 0.00 0.00 4.41
1618 1630 5.958380 ACACTCAGGGTCACTTATTCATAGA 59.042 40.000 0.00 0.00 0.00 1.98
1619 1631 6.227298 ACACTCAGGGTCACTTATTCATAG 57.773 41.667 0.00 0.00 0.00 2.23
1639 1654 3.937079 CGGGTTACCAAGGATAAGAACAC 59.063 47.826 2.98 0.00 36.13 3.32
1677 2706 7.363793 GGCAACCTGGAATGACAGTTAAATTAT 60.364 37.037 0.00 0.00 36.75 1.28
1686 2715 0.606401 ACGGCAACCTGGAATGACAG 60.606 55.000 0.00 1.07 38.21 3.51
1715 2744 2.877097 TTGGTGGCTTGCTAGATCAA 57.123 45.000 0.00 0.00 0.00 2.57
1716 2745 2.819608 GTTTTGGTGGCTTGCTAGATCA 59.180 45.455 0.00 0.00 0.00 2.92
1757 2786 2.301346 CCACTGAACCTGCTGACTTTT 58.699 47.619 0.00 0.00 0.00 2.27
1791 2820 7.237209 AGAAGATCCCATTTTCTTTTCTTGG 57.763 36.000 0.00 0.00 32.46 3.61
1811 2840 8.180267 GGTCACATTCATCTGAATACAAAGAAG 58.820 37.037 5.16 0.00 42.41 2.85
1818 2847 5.812642 ACGAAGGTCACATTCATCTGAATAC 59.187 40.000 2.64 1.34 42.41 1.89
1862 2891 5.940470 ACCTCAGTTCACAAAGGAATATGAC 59.060 40.000 5.00 0.00 32.99 3.06
1927 2997 4.618920 GTTTCTGGAGGAGGAAACACTA 57.381 45.455 11.93 0.00 45.92 2.74
1954 3024 1.750682 GCCACAACTGTTTCTGGAGGT 60.751 52.381 15.23 0.00 0.00 3.85
1958 3028 2.290641 GTGTAGCCACAACTGTTTCTGG 59.709 50.000 8.92 8.92 41.44 3.86
1963 3033 1.937899 GAACGTGTAGCCACAACTGTT 59.062 47.619 0.00 0.00 41.93 3.16
1964 3034 1.578583 GAACGTGTAGCCACAACTGT 58.421 50.000 0.00 0.00 41.93 3.55
1996 3129 3.168528 AGCTCCCGTGGTTGGTGT 61.169 61.111 0.00 0.00 0.00 4.16
1998 3131 2.448582 TTCAGCTCCCGTGGTTGGT 61.449 57.895 0.00 0.00 0.00 3.67
2063 3196 3.921677 TGGTAACCAGATTCTTCACGTC 58.078 45.455 0.00 0.00 0.00 4.34
2136 3269 1.141053 GCCACCGAGACTCCCAATATT 59.859 52.381 0.00 0.00 0.00 1.28
2168 3301 3.118112 CCTGCTCTGGGAATCATAGTTGT 60.118 47.826 0.00 0.00 0.00 3.32
2193 3326 2.440409 CATTCCAGCAACCAACTAGCT 58.560 47.619 0.00 0.00 39.63 3.32
2268 3401 0.734942 CATTGCGAGCAAGCCAAAGG 60.735 55.000 15.90 0.00 39.47 3.11
2612 3746 2.556622 CCTTGACACGCCCATTTTACTT 59.443 45.455 0.00 0.00 0.00 2.24
2658 3792 1.471287 GTTAAGCATCGAAACCACCCC 59.529 52.381 0.00 0.00 0.00 4.95
2684 3818 2.124695 GCGGGGAGGTTCATGTCC 60.125 66.667 0.00 0.00 0.00 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.