Multiple sequence alignment - TraesCS7B01G365500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G365500 chr7B 100.000 2984 0 0 1 2984 629018329 629021312 0.000000e+00 5511.0
1 TraesCS7B01G365500 chr7D 92.207 1450 97 5 1134 2581 572018227 572019662 0.000000e+00 2037.0
2 TraesCS7B01G365500 chr7D 93.893 393 20 4 2596 2984 572020562 572020954 9.210000e-165 590.0
3 TraesCS7B01G365500 chr7D 87.052 502 32 9 658 1143 572012331 572012815 1.220000e-148 536.0
4 TraesCS7B01G365500 chr7D 90.798 163 15 0 108 270 572012048 572012210 5.010000e-53 219.0
5 TraesCS7B01G365500 chr7D 91.489 94 8 0 4 97 62680645 62680552 2.410000e-26 130.0
6 TraesCS7B01G365500 chr3D 85.215 1116 134 16 1020 2111 536952375 536953483 0.000000e+00 1118.0
7 TraesCS7B01G365500 chr3D 84.241 1028 149 7 1019 2038 536979420 536980442 0.000000e+00 989.0
8 TraesCS7B01G365500 chr3D 84.375 256 38 2 1174 1428 537023511 537023765 1.780000e-62 250.0
9 TraesCS7B01G365500 chr3D 94.565 92 5 0 1 92 287335206 287335297 3.100000e-30 143.0
10 TraesCS7B01G365500 chr3A 85.391 972 133 8 1071 2038 672206292 672207258 0.000000e+00 1000.0
11 TraesCS7B01G365500 chr3A 84.216 1001 138 9 1019 2003 672210500 672211496 0.000000e+00 955.0
12 TraesCS7B01G365500 chr3A 83.756 985 146 12 1013 1987 672216078 672217058 0.000000e+00 920.0
13 TraesCS7B01G365500 chr3A 92.473 93 7 0 5 97 435813851 435813759 1.870000e-27 134.0
14 TraesCS7B01G365500 chr3B 87.091 550 70 1 1489 2038 709287043 709287591 3.270000e-174 621.0
15 TraesCS7B01G365500 chr3B 81.967 122 18 3 1019 1138 709430596 709430715 1.890000e-17 100.0
16 TraesCS7B01G365500 chr1B 91.198 409 9 4 277 658 646956059 646955651 5.660000e-147 531.0
17 TraesCS7B01G365500 chr1B 88.780 410 19 13 275 657 646960974 646961383 7.480000e-131 477.0
18 TraesCS7B01G365500 chr1B 80.405 148 21 4 2393 2533 288401384 288401530 4.070000e-19 106.0
19 TraesCS7B01G365500 chr2A 91.176 408 9 4 277 657 29284578 29284985 2.040000e-146 529.0
20 TraesCS7B01G365500 chr2A 91.000 400 9 4 275 647 29279476 29279077 5.700000e-142 514.0
21 TraesCS7B01G365500 chr4A 89.563 412 16 13 275 659 594689206 594688795 5.740000e-137 497.0
22 TraesCS7B01G365500 chr4A 89.223 399 16 12 277 648 594694278 594694676 9.680000e-130 473.0
23 TraesCS7B01G365500 chr6B 89.294 411 17 13 275 658 666065767 666065357 9.610000e-135 490.0
24 TraesCS7B01G365500 chr6B 88.971 408 18 13 277 657 666084087 666084494 2.080000e-131 479.0
25 TraesCS7B01G365500 chr6B 96.875 192 6 0 457 648 666072743 666072552 3.710000e-84 322.0
26 TraesCS7B01G365500 chr6B 96.875 192 6 0 457 648 666077307 666077116 3.710000e-84 322.0
27 TraesCS7B01G365500 chr7A 76.114 875 193 12 1113 1976 232388872 232389741 7.590000e-121 444.0
28 TraesCS7B01G365500 chr7A 94.318 88 5 0 1 88 97869465 97869552 5.190000e-28 135.0
29 TraesCS7B01G365500 chr2B 97.861 187 4 0 275 461 14169638 14169452 1.030000e-84 324.0
30 TraesCS7B01G365500 chr2B 94.845 97 5 0 1 97 43640982 43640886 5.150000e-33 152.0
31 TraesCS7B01G365500 chr2B 82.946 129 22 0 1217 1345 30313353 30313225 1.880000e-22 117.0
32 TraesCS7B01G365500 chr2B 80.000 145 26 1 1191 1335 30300935 30300794 1.460000e-18 104.0
33 TraesCS7B01G365500 chr1D 93.814 97 6 0 1 97 269323037 269323133 2.400000e-31 147.0
34 TraesCS7B01G365500 chr1D 94.624 93 3 2 6 97 479194733 479194642 3.100000e-30 143.0
35 TraesCS7B01G365500 chr4B 91.753 97 8 0 1 97 338431518 338431614 5.190000e-28 135.0
36 TraesCS7B01G365500 chr4B 93.182 88 6 0 1 88 325019169 325019256 2.410000e-26 130.0
37 TraesCS7B01G365500 chr6A 91.045 67 1 5 2471 2533 556767582 556767647 5.300000e-13 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G365500 chr7B 629018329 629021312 2983 False 5511.0 5511 100.0000 1 2984 1 chr7B.!!$F1 2983
1 TraesCS7B01G365500 chr7D 572018227 572020954 2727 False 1313.5 2037 93.0500 1134 2984 2 chr7D.!!$F2 1850
2 TraesCS7B01G365500 chr7D 572012048 572012815 767 False 377.5 536 88.9250 108 1143 2 chr7D.!!$F1 1035
3 TraesCS7B01G365500 chr3D 536952375 536953483 1108 False 1118.0 1118 85.2150 1020 2111 1 chr3D.!!$F2 1091
4 TraesCS7B01G365500 chr3D 536979420 536980442 1022 False 989.0 989 84.2410 1019 2038 1 chr3D.!!$F3 1019
5 TraesCS7B01G365500 chr3A 672206292 672211496 5204 False 977.5 1000 84.8035 1019 2038 2 chr3A.!!$F2 1019
6 TraesCS7B01G365500 chr3A 672216078 672217058 980 False 920.0 920 83.7560 1013 1987 1 chr3A.!!$F1 974
7 TraesCS7B01G365500 chr3B 709287043 709287591 548 False 621.0 621 87.0910 1489 2038 1 chr3B.!!$F1 549
8 TraesCS7B01G365500 chr7A 232388872 232389741 869 False 444.0 444 76.1140 1113 1976 1 chr7A.!!$F2 863

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
165 166 0.035458 CCACGCCCTCTCTTGTCTTT 59.965 55.0 0.0 0.0 0.0 2.52 F
594 595 0.036732 AGATTGTCGGTGCCACATGT 59.963 50.0 0.0 0.0 0.0 3.21 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1703 1744 0.391661 GAGGAACTTGGCGAGCATCA 60.392 55.0 0.37 0.0 41.55 3.07 R
2459 3674 0.477597 TCCAACCTTCCACCCTCCAT 60.478 55.0 0.00 0.0 0.00 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.278026 CCTGGCGCTTTTAAATCACC 57.722 50.000 7.64 0.00 0.00 4.02
20 21 1.543802 CCTGGCGCTTTTAAATCACCA 59.456 47.619 7.64 0.00 0.00 4.17
21 22 2.029470 CCTGGCGCTTTTAAATCACCAA 60.029 45.455 7.64 0.00 0.00 3.67
22 23 3.368323 CCTGGCGCTTTTAAATCACCAAT 60.368 43.478 7.64 0.00 0.00 3.16
23 24 3.583806 TGGCGCTTTTAAATCACCAATG 58.416 40.909 7.64 0.00 0.00 2.82
24 25 3.006323 TGGCGCTTTTAAATCACCAATGT 59.994 39.130 7.64 0.00 0.00 2.71
25 26 3.612423 GGCGCTTTTAAATCACCAATGTC 59.388 43.478 7.64 0.00 0.00 3.06
26 27 4.233789 GCGCTTTTAAATCACCAATGTCA 58.766 39.130 0.00 0.00 0.00 3.58
27 28 4.683781 GCGCTTTTAAATCACCAATGTCAA 59.316 37.500 0.00 0.00 0.00 3.18
28 29 5.176590 GCGCTTTTAAATCACCAATGTCAAA 59.823 36.000 0.00 0.00 0.00 2.69
29 30 6.128580 GCGCTTTTAAATCACCAATGTCAAAT 60.129 34.615 0.00 0.00 0.00 2.32
30 31 7.062839 GCGCTTTTAAATCACCAATGTCAAATA 59.937 33.333 0.00 0.00 0.00 1.40
31 32 8.920665 CGCTTTTAAATCACCAATGTCAAATAA 58.079 29.630 0.00 0.00 0.00 1.40
34 35 8.770438 TTTAAATCACCAATGTCAAATAAGGC 57.230 30.769 0.00 0.00 0.00 4.35
35 36 6.610075 AAATCACCAATGTCAAATAAGGCT 57.390 33.333 0.00 0.00 0.00 4.58
36 37 5.587388 ATCACCAATGTCAAATAAGGCTG 57.413 39.130 0.00 0.00 0.00 4.85
37 38 4.406456 TCACCAATGTCAAATAAGGCTGT 58.594 39.130 0.00 0.00 0.00 4.40
38 39 4.458989 TCACCAATGTCAAATAAGGCTGTC 59.541 41.667 0.00 0.00 0.00 3.51
39 40 4.460382 CACCAATGTCAAATAAGGCTGTCT 59.540 41.667 0.00 0.00 0.00 3.41
40 41 5.047802 CACCAATGTCAAATAAGGCTGTCTT 60.048 40.000 0.00 0.00 39.40 3.01
41 42 6.150976 CACCAATGTCAAATAAGGCTGTCTTA 59.849 38.462 3.93 3.93 41.66 2.10
42 43 6.719370 ACCAATGTCAAATAAGGCTGTCTTAA 59.281 34.615 5.74 0.00 40.89 1.85
43 44 7.029563 CCAATGTCAAATAAGGCTGTCTTAAC 58.970 38.462 5.74 0.54 40.89 2.01
44 45 7.094205 CCAATGTCAAATAAGGCTGTCTTAACT 60.094 37.037 5.74 0.00 40.89 2.24
45 46 8.299570 CAATGTCAAATAAGGCTGTCTTAACTT 58.700 33.333 5.74 0.33 40.89 2.66
46 47 7.435068 TGTCAAATAAGGCTGTCTTAACTTC 57.565 36.000 5.74 0.00 40.89 3.01
47 48 6.430000 TGTCAAATAAGGCTGTCTTAACTTCC 59.570 38.462 5.74 0.00 40.89 3.46
48 49 6.655425 GTCAAATAAGGCTGTCTTAACTTCCT 59.345 38.462 5.74 0.00 40.89 3.36
49 50 6.879458 TCAAATAAGGCTGTCTTAACTTCCTC 59.121 38.462 5.74 0.00 40.89 3.71
50 51 6.628644 AATAAGGCTGTCTTAACTTCCTCT 57.371 37.500 5.74 0.00 40.89 3.69
51 52 4.984146 AAGGCTGTCTTAACTTCCTCTT 57.016 40.909 0.00 0.00 33.14 2.85
52 53 4.545208 AGGCTGTCTTAACTTCCTCTTC 57.455 45.455 0.00 0.00 0.00 2.87
53 54 4.164204 AGGCTGTCTTAACTTCCTCTTCT 58.836 43.478 0.00 0.00 0.00 2.85
54 55 4.020662 AGGCTGTCTTAACTTCCTCTTCTG 60.021 45.833 0.00 0.00 0.00 3.02
55 56 4.262678 GGCTGTCTTAACTTCCTCTTCTGT 60.263 45.833 0.00 0.00 0.00 3.41
56 57 5.047235 GGCTGTCTTAACTTCCTCTTCTGTA 60.047 44.000 0.00 0.00 0.00 2.74
57 58 6.351456 GGCTGTCTTAACTTCCTCTTCTGTAT 60.351 42.308 0.00 0.00 0.00 2.29
58 59 7.147880 GGCTGTCTTAACTTCCTCTTCTGTATA 60.148 40.741 0.00 0.00 0.00 1.47
59 60 8.417884 GCTGTCTTAACTTCCTCTTCTGTATAT 58.582 37.037 0.00 0.00 0.00 0.86
60 61 9.743057 CTGTCTTAACTTCCTCTTCTGTATATG 57.257 37.037 0.00 0.00 0.00 1.78
61 62 8.696374 TGTCTTAACTTCCTCTTCTGTATATGG 58.304 37.037 0.00 0.00 0.00 2.74
62 63 8.145122 GTCTTAACTTCCTCTTCTGTATATGGG 58.855 40.741 0.00 0.00 0.00 4.00
63 64 5.896073 AACTTCCTCTTCTGTATATGGGG 57.104 43.478 0.00 0.00 0.00 4.96
64 65 3.648545 ACTTCCTCTTCTGTATATGGGGC 59.351 47.826 0.00 0.00 0.00 5.80
65 66 2.621070 TCCTCTTCTGTATATGGGGCC 58.379 52.381 0.00 0.00 0.00 5.80
66 67 2.090210 TCCTCTTCTGTATATGGGGCCA 60.090 50.000 4.39 0.00 0.00 5.36
67 68 2.915604 CCTCTTCTGTATATGGGGCCAT 59.084 50.000 4.39 0.00 40.19 4.40
68 69 3.307975 CCTCTTCTGTATATGGGGCCATG 60.308 52.174 4.39 0.00 37.82 3.66
69 70 3.584406 CTCTTCTGTATATGGGGCCATGA 59.416 47.826 4.39 0.00 37.82 3.07
70 71 3.584406 TCTTCTGTATATGGGGCCATGAG 59.416 47.826 4.39 0.00 37.82 2.90
71 72 2.269023 TCTGTATATGGGGCCATGAGG 58.731 52.381 4.39 0.00 37.82 3.86
72 73 1.283029 CTGTATATGGGGCCATGAGGG 59.717 57.143 4.39 0.00 37.82 4.30
83 84 2.986534 CCATGAGGGCCCTATTCATT 57.013 50.000 28.78 0.00 29.48 2.57
84 85 3.249481 CCATGAGGGCCCTATTCATTT 57.751 47.619 28.78 0.00 29.48 2.32
85 86 3.160269 CCATGAGGGCCCTATTCATTTC 58.840 50.000 28.78 10.80 29.48 2.17
86 87 3.436906 CCATGAGGGCCCTATTCATTTCA 60.437 47.826 28.78 17.04 29.48 2.69
87 88 4.413760 CATGAGGGCCCTATTCATTTCAT 58.586 43.478 28.78 18.71 29.48 2.57
88 89 5.517122 CCATGAGGGCCCTATTCATTTCATA 60.517 44.000 28.78 0.00 29.48 2.15
89 90 5.865977 TGAGGGCCCTATTCATTTCATAT 57.134 39.130 28.78 0.00 0.00 1.78
90 91 5.573219 TGAGGGCCCTATTCATTTCATATG 58.427 41.667 28.78 0.00 0.00 1.78
91 92 5.074929 TGAGGGCCCTATTCATTTCATATGT 59.925 40.000 28.78 0.00 0.00 2.29
92 93 5.574188 AGGGCCCTATTCATTTCATATGTC 58.426 41.667 27.42 0.00 0.00 3.06
93 94 4.706962 GGGCCCTATTCATTTCATATGTCC 59.293 45.833 17.04 0.00 0.00 4.02
94 95 4.706962 GGCCCTATTCATTTCATATGTCCC 59.293 45.833 1.90 0.00 0.00 4.46
95 96 5.517299 GGCCCTATTCATTTCATATGTCCCT 60.517 44.000 1.90 0.00 0.00 4.20
96 97 6.012745 GCCCTATTCATTTCATATGTCCCTT 58.987 40.000 1.90 0.00 0.00 3.95
97 98 7.175104 GCCCTATTCATTTCATATGTCCCTTA 58.825 38.462 1.90 0.00 0.00 2.69
98 99 7.669722 GCCCTATTCATTTCATATGTCCCTTAA 59.330 37.037 1.90 0.00 0.00 1.85
99 100 9.759473 CCCTATTCATTTCATATGTCCCTTAAT 57.241 33.333 1.90 0.93 0.00 1.40
102 103 8.655935 ATTCATTTCATATGTCCCTTAATCCC 57.344 34.615 1.90 0.00 0.00 3.85
103 104 7.406620 TCATTTCATATGTCCCTTAATCCCT 57.593 36.000 1.90 0.00 0.00 4.20
104 105 7.825709 TCATTTCATATGTCCCTTAATCCCTT 58.174 34.615 1.90 0.00 0.00 3.95
105 106 8.954729 TCATTTCATATGTCCCTTAATCCCTTA 58.045 33.333 1.90 0.00 0.00 2.69
106 107 9.586732 CATTTCATATGTCCCTTAATCCCTTAA 57.413 33.333 1.90 0.00 0.00 1.85
108 109 9.807921 TTTCATATGTCCCTTAATCCCTTAATC 57.192 33.333 1.90 0.00 0.00 1.75
109 110 8.757307 TCATATGTCCCTTAATCCCTTAATCT 57.243 34.615 1.90 0.00 0.00 2.40
116 117 6.784969 TCCCTTAATCCCTTAATCTCTCTCAG 59.215 42.308 0.00 0.00 0.00 3.35
134 135 2.598394 AATGCACTGCCGGCTGTT 60.598 55.556 33.47 18.75 0.00 3.16
164 165 1.674057 CCACGCCCTCTCTTGTCTT 59.326 57.895 0.00 0.00 0.00 3.01
165 166 0.035458 CCACGCCCTCTCTTGTCTTT 59.965 55.000 0.00 0.00 0.00 2.52
169 170 3.813166 CACGCCCTCTCTTGTCTTTAAAA 59.187 43.478 0.00 0.00 0.00 1.52
173 174 5.390991 CGCCCTCTCTTGTCTTTAAAATGAC 60.391 44.000 1.60 1.60 34.65 3.06
212 213 2.202492 CGCACCGACGGAGAAGAG 60.202 66.667 23.38 5.36 0.00 2.85
223 224 1.585006 GAGAAGAGAACGGCGTCCA 59.415 57.895 15.17 0.00 0.00 4.02
241 242 0.110644 CACTTCTTTCGCTCAACCGC 60.111 55.000 0.00 0.00 0.00 5.68
264 265 2.046988 TGGCACGCCTCACATCAG 60.047 61.111 9.92 0.00 36.94 2.90
270 271 2.743538 GCCTCACATCAGCGCACA 60.744 61.111 11.47 0.00 0.00 4.57
271 272 2.110967 GCCTCACATCAGCGCACAT 61.111 57.895 11.47 0.00 0.00 3.21
272 273 2.012237 CCTCACATCAGCGCACATC 58.988 57.895 11.47 0.00 0.00 3.06
273 274 0.741927 CCTCACATCAGCGCACATCA 60.742 55.000 11.47 0.00 0.00 3.07
274 275 0.651031 CTCACATCAGCGCACATCAG 59.349 55.000 11.47 0.00 0.00 2.90
275 276 1.062047 CACATCAGCGCACATCAGC 59.938 57.895 11.47 0.00 0.00 4.26
298 299 4.101790 GCCGCCATGAACGTGGTG 62.102 66.667 16.76 16.76 46.82 4.17
299 300 2.668212 CCGCCATGAACGTGGTGT 60.668 61.111 20.42 0.00 46.04 4.16
301 302 2.677003 CGCCATGAACGTGGTGTCC 61.677 63.158 15.81 0.00 43.24 4.02
303 304 2.677003 CCATGAACGTGGTGTCCGC 61.677 63.158 0.00 0.00 34.46 5.54
304 305 2.358247 ATGAACGTGGTGTCCGCC 60.358 61.111 0.00 0.00 0.00 6.13
318 319 3.891400 CGCCGGGCCAACATCATG 61.891 66.667 14.55 0.00 0.00 3.07
319 320 3.530260 GCCGGGCCAACATCATGG 61.530 66.667 8.12 0.00 43.70 3.66
327 328 2.148916 CCAACATCATGGCATGCATC 57.851 50.000 22.56 3.15 32.78 3.91
329 330 0.671796 AACATCATGGCATGCATCCG 59.328 50.000 22.56 10.54 0.00 4.18
330 331 1.080772 CATCATGGCATGCATCCGC 60.081 57.895 22.56 0.00 39.24 5.54
376 377 3.546397 GCGACGAGCTTCTTCGGC 61.546 66.667 12.68 2.15 45.06 5.54
378 379 2.178521 GACGAGCTTCTTCGGCGA 59.821 61.111 4.99 4.99 44.57 5.54
379 380 1.870016 GACGAGCTTCTTCGGCGAG 60.870 63.158 10.46 4.79 44.57 5.03
381 382 2.574399 GAGCTTCTTCGGCGAGGT 59.426 61.111 18.75 8.63 34.52 3.85
383 384 2.214181 GAGCTTCTTCGGCGAGGTCA 62.214 60.000 18.75 6.23 37.73 4.02
384 385 1.153549 GCTTCTTCGGCGAGGTCAT 60.154 57.895 18.75 0.00 0.00 3.06
385 386 1.424493 GCTTCTTCGGCGAGGTCATG 61.424 60.000 18.75 8.54 0.00 3.07
386 387 0.173481 CTTCTTCGGCGAGGTCATGA 59.827 55.000 18.75 0.00 0.00 3.07
388 389 0.606096 TCTTCGGCGAGGTCATGAAA 59.394 50.000 18.75 0.00 0.00 2.69
390 391 0.606096 TTCGGCGAGGTCATGAAAGA 59.394 50.000 10.46 0.00 0.00 2.52
391 392 0.173481 TCGGCGAGGTCATGAAAGAG 59.827 55.000 4.99 0.00 0.00 2.85
392 393 0.173481 CGGCGAGGTCATGAAAGAGA 59.827 55.000 0.00 0.00 0.00 3.10
393 394 1.800655 CGGCGAGGTCATGAAAGAGAG 60.801 57.143 0.00 0.00 0.00 3.20
394 395 1.472376 GGCGAGGTCATGAAAGAGAGG 60.472 57.143 0.00 0.00 0.00 3.69
395 396 1.205893 GCGAGGTCATGAAAGAGAGGT 59.794 52.381 0.00 0.00 0.00 3.85
396 397 2.737039 GCGAGGTCATGAAAGAGAGGTC 60.737 54.545 0.00 0.00 0.00 3.85
397 398 2.159170 CGAGGTCATGAAAGAGAGGTCC 60.159 54.545 0.00 0.00 0.00 4.46
398 399 3.103742 GAGGTCATGAAAGAGAGGTCCT 58.896 50.000 0.00 0.00 0.00 3.85
399 400 3.103742 AGGTCATGAAAGAGAGGTCCTC 58.896 50.000 11.31 11.31 42.28 3.71
400 401 2.159170 GGTCATGAAAGAGAGGTCCTCG 60.159 54.545 13.41 0.00 46.49 4.63
401 402 1.478510 TCATGAAAGAGAGGTCCTCGC 59.521 52.381 14.41 14.41 46.49 5.03
402 403 1.480137 CATGAAAGAGAGGTCCTCGCT 59.520 52.381 18.67 18.67 46.49 4.93
403 404 0.891373 TGAAAGAGAGGTCCTCGCTG 59.109 55.000 24.10 0.00 46.49 5.18
404 405 0.459411 GAAAGAGAGGTCCTCGCTGC 60.459 60.000 24.10 15.83 46.49 5.25
405 406 0.902516 AAAGAGAGGTCCTCGCTGCT 60.903 55.000 24.10 12.74 46.49 4.24
406 407 1.603236 AAGAGAGGTCCTCGCTGCTG 61.603 60.000 24.10 0.00 46.49 4.41
407 408 3.714871 GAGAGGTCCTCGCTGCTGC 62.715 68.421 14.91 5.34 35.36 5.25
462 463 4.910585 CGTGGCCGCCATAGACCC 62.911 72.222 16.96 0.00 35.28 4.46
463 464 3.792736 GTGGCCGCCATAGACCCA 61.793 66.667 16.96 0.00 35.28 4.51
464 465 3.792736 TGGCCGCCATAGACCCAC 61.793 66.667 8.43 0.00 0.00 4.61
465 466 4.910585 GGCCGCCATAGACCCACG 62.911 72.222 3.91 0.00 0.00 4.94
466 467 4.157120 GCCGCCATAGACCCACGT 62.157 66.667 0.00 0.00 0.00 4.49
467 468 2.788640 GCCGCCATAGACCCACGTA 61.789 63.158 0.00 0.00 0.00 3.57
468 469 1.066918 CCGCCATAGACCCACGTAC 59.933 63.158 0.00 0.00 0.00 3.67
469 470 1.066918 CGCCATAGACCCACGTACC 59.933 63.158 0.00 0.00 0.00 3.34
470 471 1.389609 CGCCATAGACCCACGTACCT 61.390 60.000 0.00 0.00 0.00 3.08
471 472 1.696063 GCCATAGACCCACGTACCTA 58.304 55.000 0.00 0.00 0.00 3.08
472 473 2.245582 GCCATAGACCCACGTACCTAT 58.754 52.381 0.00 0.00 0.00 2.57
473 474 2.631545 GCCATAGACCCACGTACCTATT 59.368 50.000 0.00 0.00 0.00 1.73
474 475 3.828451 GCCATAGACCCACGTACCTATTA 59.172 47.826 0.00 0.00 0.00 0.98
475 476 4.082354 GCCATAGACCCACGTACCTATTAG 60.082 50.000 0.00 0.00 0.00 1.73
476 477 5.319453 CCATAGACCCACGTACCTATTAGA 58.681 45.833 0.00 0.00 0.00 2.10
477 478 5.415077 CCATAGACCCACGTACCTATTAGAG 59.585 48.000 0.00 0.00 0.00 2.43
478 479 3.220940 AGACCCACGTACCTATTAGAGC 58.779 50.000 0.00 0.00 0.00 4.09
479 480 1.952296 ACCCACGTACCTATTAGAGCG 59.048 52.381 0.00 0.00 0.00 5.03
480 481 2.224606 CCCACGTACCTATTAGAGCGA 58.775 52.381 0.00 0.00 0.00 4.93
481 482 2.818432 CCCACGTACCTATTAGAGCGAT 59.182 50.000 0.00 0.00 0.00 4.58
482 483 3.366070 CCCACGTACCTATTAGAGCGATG 60.366 52.174 0.00 0.00 0.00 3.84
483 484 3.501062 CCACGTACCTATTAGAGCGATGA 59.499 47.826 0.00 0.00 0.00 2.92
484 485 4.023450 CCACGTACCTATTAGAGCGATGAA 60.023 45.833 0.00 0.00 0.00 2.57
485 486 5.147865 CACGTACCTATTAGAGCGATGAAG 58.852 45.833 0.00 0.00 0.00 3.02
486 487 4.215827 ACGTACCTATTAGAGCGATGAAGG 59.784 45.833 0.00 0.00 0.00 3.46
487 488 4.454847 CGTACCTATTAGAGCGATGAAGGA 59.545 45.833 0.00 0.00 0.00 3.36
488 489 5.124138 CGTACCTATTAGAGCGATGAAGGAT 59.876 44.000 0.00 0.00 0.00 3.24
489 490 5.398603 ACCTATTAGAGCGATGAAGGATG 57.601 43.478 0.00 0.00 0.00 3.51
490 491 4.835615 ACCTATTAGAGCGATGAAGGATGT 59.164 41.667 0.00 0.00 0.00 3.06
491 492 6.010850 ACCTATTAGAGCGATGAAGGATGTA 58.989 40.000 0.00 0.00 0.00 2.29
492 493 6.071840 ACCTATTAGAGCGATGAAGGATGTAC 60.072 42.308 0.00 0.00 0.00 2.90
493 494 2.783828 AGAGCGATGAAGGATGTACG 57.216 50.000 0.00 0.00 0.00 3.67
494 495 2.025155 AGAGCGATGAAGGATGTACGT 58.975 47.619 0.00 0.00 0.00 3.57
495 496 3.211865 AGAGCGATGAAGGATGTACGTA 58.788 45.455 0.00 0.00 0.00 3.57
496 497 3.003482 AGAGCGATGAAGGATGTACGTAC 59.997 47.826 18.90 18.90 0.00 3.67
497 498 2.041966 GCGATGAAGGATGTACGTACG 58.958 52.381 20.18 15.01 0.00 3.67
498 499 2.540361 GCGATGAAGGATGTACGTACGT 60.540 50.000 25.98 25.98 0.00 3.57
499 500 3.303329 GCGATGAAGGATGTACGTACGTA 60.303 47.826 23.60 23.60 0.00 3.57
510 511 3.532138 CGTACGTACGTATGTGGGG 57.468 57.895 33.95 13.64 44.13 4.96
511 512 0.732571 CGTACGTACGTATGTGGGGT 59.267 55.000 33.95 6.93 44.13 4.95
512 513 1.132262 CGTACGTACGTATGTGGGGTT 59.868 52.381 33.95 6.25 44.13 4.11
513 514 2.791158 CGTACGTACGTATGTGGGGTTC 60.791 54.545 33.95 15.44 44.13 3.62
514 515 1.549203 ACGTACGTATGTGGGGTTCT 58.451 50.000 21.41 0.00 0.00 3.01
515 516 1.203052 ACGTACGTATGTGGGGTTCTG 59.797 52.381 21.41 0.00 0.00 3.02
516 517 1.470285 CGTACGTATGTGGGGTTCTGG 60.470 57.143 7.22 0.00 0.00 3.86
517 518 1.826720 GTACGTATGTGGGGTTCTGGA 59.173 52.381 0.00 0.00 0.00 3.86
518 519 1.354101 ACGTATGTGGGGTTCTGGAA 58.646 50.000 0.00 0.00 0.00 3.53
519 520 1.913419 ACGTATGTGGGGTTCTGGAAT 59.087 47.619 0.00 0.00 0.00 3.01
520 521 2.093128 ACGTATGTGGGGTTCTGGAATC 60.093 50.000 0.00 0.00 0.00 2.52
521 522 2.561569 GTATGTGGGGTTCTGGAATCG 58.438 52.381 0.00 0.00 0.00 3.34
522 523 0.255890 ATGTGGGGTTCTGGAATCGG 59.744 55.000 0.00 0.00 0.00 4.18
523 524 1.077716 GTGGGGTTCTGGAATCGGG 60.078 63.158 0.00 0.00 0.00 5.14
524 525 1.229690 TGGGGTTCTGGAATCGGGA 60.230 57.895 0.00 0.00 0.00 5.14
525 526 0.842905 TGGGGTTCTGGAATCGGGAA 60.843 55.000 0.00 0.00 0.00 3.97
526 527 0.551396 GGGGTTCTGGAATCGGGAAT 59.449 55.000 0.00 0.00 0.00 3.01
527 528 1.477014 GGGGTTCTGGAATCGGGAATC 60.477 57.143 0.00 0.00 0.00 2.52
528 529 1.211949 GGGTTCTGGAATCGGGAATCA 59.788 52.381 0.00 0.00 0.00 2.57
529 530 2.565841 GGTTCTGGAATCGGGAATCAG 58.434 52.381 0.00 0.00 0.00 2.90
530 531 1.943340 GTTCTGGAATCGGGAATCAGC 59.057 52.381 0.00 0.00 0.00 4.26
531 532 1.500474 TCTGGAATCGGGAATCAGCT 58.500 50.000 0.00 0.00 0.00 4.24
532 533 1.139654 TCTGGAATCGGGAATCAGCTG 59.860 52.381 7.63 7.63 0.00 4.24
533 534 0.911769 TGGAATCGGGAATCAGCTGT 59.088 50.000 14.67 0.00 0.00 4.40
534 535 1.281867 TGGAATCGGGAATCAGCTGTT 59.718 47.619 14.67 7.43 0.00 3.16
535 536 1.672881 GGAATCGGGAATCAGCTGTTG 59.327 52.381 14.67 0.00 0.00 3.33
536 537 1.672881 GAATCGGGAATCAGCTGTTGG 59.327 52.381 14.67 0.00 0.00 3.77
537 538 0.107017 ATCGGGAATCAGCTGTTGGG 60.107 55.000 14.67 0.00 0.00 4.12
538 539 1.198094 TCGGGAATCAGCTGTTGGGA 61.198 55.000 14.67 2.41 0.00 4.37
539 540 0.107017 CGGGAATCAGCTGTTGGGAT 60.107 55.000 14.67 0.00 0.00 3.85
540 541 1.683011 CGGGAATCAGCTGTTGGGATT 60.683 52.381 14.67 5.39 34.16 3.01
541 542 1.753073 GGGAATCAGCTGTTGGGATTG 59.247 52.381 14.67 0.00 31.77 2.67
542 543 2.621407 GGGAATCAGCTGTTGGGATTGA 60.621 50.000 14.67 0.00 31.77 2.57
543 544 2.686915 GGAATCAGCTGTTGGGATTGAG 59.313 50.000 14.67 0.00 31.77 3.02
544 545 3.614092 GAATCAGCTGTTGGGATTGAGA 58.386 45.455 14.67 0.00 31.77 3.27
545 546 3.947612 ATCAGCTGTTGGGATTGAGAT 57.052 42.857 14.67 0.00 0.00 2.75
546 547 3.272574 TCAGCTGTTGGGATTGAGATC 57.727 47.619 14.67 0.00 0.00 2.75
547 548 2.573009 TCAGCTGTTGGGATTGAGATCA 59.427 45.455 14.67 0.00 33.77 2.92
548 549 2.943690 CAGCTGTTGGGATTGAGATCAG 59.056 50.000 5.25 0.00 33.77 2.90
549 550 2.842496 AGCTGTTGGGATTGAGATCAGA 59.158 45.455 0.00 0.00 33.77 3.27
550 551 2.941720 GCTGTTGGGATTGAGATCAGAC 59.058 50.000 0.00 0.00 33.77 3.51
551 552 3.193263 CTGTTGGGATTGAGATCAGACG 58.807 50.000 0.00 0.00 33.77 4.18
552 553 2.567169 TGTTGGGATTGAGATCAGACGT 59.433 45.455 0.00 0.00 33.77 4.34
553 554 2.932614 GTTGGGATTGAGATCAGACGTG 59.067 50.000 0.00 0.00 33.77 4.49
554 555 2.456577 TGGGATTGAGATCAGACGTGA 58.543 47.619 0.00 0.00 37.02 4.35
555 556 2.831526 TGGGATTGAGATCAGACGTGAA 59.168 45.455 0.00 0.00 35.88 3.18
556 557 3.118992 TGGGATTGAGATCAGACGTGAAG 60.119 47.826 0.00 0.00 35.88 3.02
557 558 3.118956 GGGATTGAGATCAGACGTGAAGT 60.119 47.826 0.00 0.00 35.88 3.01
558 559 3.862267 GGATTGAGATCAGACGTGAAGTG 59.138 47.826 0.00 0.00 35.88 3.16
559 560 3.303881 TTGAGATCAGACGTGAAGTGG 57.696 47.619 0.00 0.00 35.88 4.00
560 561 1.546029 TGAGATCAGACGTGAAGTGGG 59.454 52.381 0.00 0.00 35.88 4.61
561 562 1.819288 GAGATCAGACGTGAAGTGGGA 59.181 52.381 0.00 0.00 35.88 4.37
562 563 2.428890 GAGATCAGACGTGAAGTGGGAT 59.571 50.000 0.00 0.00 35.88 3.85
563 564 2.834549 AGATCAGACGTGAAGTGGGATT 59.165 45.455 0.00 0.00 35.88 3.01
564 565 4.023980 AGATCAGACGTGAAGTGGGATTA 58.976 43.478 0.00 0.00 35.88 1.75
565 566 3.868757 TCAGACGTGAAGTGGGATTAG 57.131 47.619 0.00 0.00 0.00 1.73
566 567 2.496070 TCAGACGTGAAGTGGGATTAGG 59.504 50.000 0.00 0.00 0.00 2.69
567 568 1.831736 AGACGTGAAGTGGGATTAGGG 59.168 52.381 0.00 0.00 0.00 3.53
568 569 1.553704 GACGTGAAGTGGGATTAGGGT 59.446 52.381 0.00 0.00 0.00 4.34
569 570 1.278127 ACGTGAAGTGGGATTAGGGTG 59.722 52.381 0.00 0.00 0.00 4.61
570 571 1.751437 GTGAAGTGGGATTAGGGTGC 58.249 55.000 0.00 0.00 0.00 5.01
571 572 1.282157 GTGAAGTGGGATTAGGGTGCT 59.718 52.381 0.00 0.00 0.00 4.40
572 573 1.559682 TGAAGTGGGATTAGGGTGCTC 59.440 52.381 0.00 0.00 0.00 4.26
573 574 1.840635 GAAGTGGGATTAGGGTGCTCT 59.159 52.381 0.00 0.00 0.00 4.09
574 575 1.207791 AGTGGGATTAGGGTGCTCTG 58.792 55.000 0.00 0.00 0.00 3.35
575 576 1.204146 GTGGGATTAGGGTGCTCTGA 58.796 55.000 0.00 0.00 0.00 3.27
576 577 1.139853 GTGGGATTAGGGTGCTCTGAG 59.860 57.143 0.00 0.00 0.00 3.35
577 578 1.008327 TGGGATTAGGGTGCTCTGAGA 59.992 52.381 9.28 0.00 0.00 3.27
578 579 2.334023 GGGATTAGGGTGCTCTGAGAT 58.666 52.381 9.28 0.00 0.00 2.75
579 580 2.708325 GGGATTAGGGTGCTCTGAGATT 59.292 50.000 9.28 0.00 0.00 2.40
580 581 3.495806 GGGATTAGGGTGCTCTGAGATTG 60.496 52.174 9.28 0.00 0.00 2.67
581 582 3.135530 GGATTAGGGTGCTCTGAGATTGT 59.864 47.826 9.28 0.00 0.00 2.71
582 583 3.895232 TTAGGGTGCTCTGAGATTGTC 57.105 47.619 9.28 0.00 0.00 3.18
583 584 0.534412 AGGGTGCTCTGAGATTGTCG 59.466 55.000 9.28 0.00 0.00 4.35
584 585 0.460987 GGGTGCTCTGAGATTGTCGG 60.461 60.000 9.28 0.00 0.00 4.79
585 586 0.247736 GGTGCTCTGAGATTGTCGGT 59.752 55.000 9.28 0.00 32.66 4.69
586 587 1.354040 GTGCTCTGAGATTGTCGGTG 58.646 55.000 9.28 0.00 32.66 4.94
587 588 0.390340 TGCTCTGAGATTGTCGGTGC 60.390 55.000 9.28 9.15 46.92 5.01
588 589 1.086634 GCTCTGAGATTGTCGGTGCC 61.087 60.000 9.28 0.00 42.82 5.01
589 590 0.247460 CTCTGAGATTGTCGGTGCCA 59.753 55.000 0.00 0.00 32.66 4.92
590 591 0.037326 TCTGAGATTGTCGGTGCCAC 60.037 55.000 0.00 0.00 32.66 5.01
591 592 0.320683 CTGAGATTGTCGGTGCCACA 60.321 55.000 0.00 0.00 0.00 4.17
592 593 0.324614 TGAGATTGTCGGTGCCACAT 59.675 50.000 0.00 0.00 0.00 3.21
593 594 0.729116 GAGATTGTCGGTGCCACATG 59.271 55.000 0.00 0.00 0.00 3.21
594 595 0.036732 AGATTGTCGGTGCCACATGT 59.963 50.000 0.00 0.00 0.00 3.21
595 596 0.447801 GATTGTCGGTGCCACATGTC 59.552 55.000 0.00 0.00 0.00 3.06
596 597 1.298157 ATTGTCGGTGCCACATGTCG 61.298 55.000 0.00 0.00 0.00 4.35
597 598 3.788766 GTCGGTGCCACATGTCGC 61.789 66.667 8.67 8.67 0.00 5.19
598 599 4.002506 TCGGTGCCACATGTCGCT 62.003 61.111 16.56 0.00 0.00 4.93
599 600 3.490759 CGGTGCCACATGTCGCTC 61.491 66.667 16.56 12.54 0.00 5.03
600 601 2.358615 GGTGCCACATGTCGCTCA 60.359 61.111 16.56 0.00 0.00 4.26
601 602 1.746615 GGTGCCACATGTCGCTCAT 60.747 57.895 16.56 0.00 37.22 2.90
602 603 1.709147 GGTGCCACATGTCGCTCATC 61.709 60.000 16.56 4.83 34.09 2.92
603 604 1.450134 TGCCACATGTCGCTCATCC 60.450 57.895 16.56 0.00 34.09 3.51
604 605 1.450134 GCCACATGTCGCTCATCCA 60.450 57.895 8.32 0.00 34.09 3.41
605 606 1.026182 GCCACATGTCGCTCATCCAA 61.026 55.000 8.32 0.00 34.09 3.53
606 607 1.671979 CCACATGTCGCTCATCCAAT 58.328 50.000 0.00 0.00 34.09 3.16
607 608 2.837498 CCACATGTCGCTCATCCAATA 58.163 47.619 0.00 0.00 34.09 1.90
608 609 2.804527 CCACATGTCGCTCATCCAATAG 59.195 50.000 0.00 0.00 34.09 1.73
609 610 2.804527 CACATGTCGCTCATCCAATAGG 59.195 50.000 0.00 0.00 34.09 2.57
610 611 2.224378 ACATGTCGCTCATCCAATAGGG 60.224 50.000 0.00 0.00 34.09 3.53
611 612 1.496060 TGTCGCTCATCCAATAGGGT 58.504 50.000 0.00 0.00 38.11 4.34
612 613 1.412710 TGTCGCTCATCCAATAGGGTC 59.587 52.381 0.00 0.00 38.11 4.46
613 614 1.689273 GTCGCTCATCCAATAGGGTCT 59.311 52.381 0.00 0.00 38.11 3.85
614 615 1.964223 TCGCTCATCCAATAGGGTCTC 59.036 52.381 0.00 0.00 38.11 3.36
615 616 1.688735 CGCTCATCCAATAGGGTCTCA 59.311 52.381 0.00 0.00 38.11 3.27
616 617 2.546795 CGCTCATCCAATAGGGTCTCAC 60.547 54.545 0.00 0.00 38.11 3.51
617 618 2.435805 GCTCATCCAATAGGGTCTCACA 59.564 50.000 0.00 0.00 38.11 3.58
618 619 3.118261 GCTCATCCAATAGGGTCTCACAA 60.118 47.826 0.00 0.00 38.11 3.33
619 620 4.701765 CTCATCCAATAGGGTCTCACAAG 58.298 47.826 0.00 0.00 38.11 3.16
620 621 3.118261 TCATCCAATAGGGTCTCACAAGC 60.118 47.826 0.00 0.00 38.11 4.01
621 622 2.551270 TCCAATAGGGTCTCACAAGCT 58.449 47.619 0.00 0.00 38.11 3.74
622 623 2.237143 TCCAATAGGGTCTCACAAGCTG 59.763 50.000 0.00 0.00 38.11 4.24
623 624 2.636830 CAATAGGGTCTCACAAGCTGG 58.363 52.381 0.00 0.00 0.00 4.85
624 625 1.958288 ATAGGGTCTCACAAGCTGGT 58.042 50.000 0.00 0.00 0.00 4.00
625 626 1.267121 TAGGGTCTCACAAGCTGGTC 58.733 55.000 0.00 0.00 0.00 4.02
626 627 0.472734 AGGGTCTCACAAGCTGGTCT 60.473 55.000 0.00 0.00 0.00 3.85
627 628 1.203187 AGGGTCTCACAAGCTGGTCTA 60.203 52.381 0.00 0.00 0.00 2.59
628 629 1.834263 GGGTCTCACAAGCTGGTCTAT 59.166 52.381 0.00 0.00 0.00 1.98
629 630 2.419297 GGGTCTCACAAGCTGGTCTATG 60.419 54.545 0.00 0.00 0.00 2.23
630 631 2.497675 GGTCTCACAAGCTGGTCTATGA 59.502 50.000 0.00 0.00 0.00 2.15
631 632 3.430098 GGTCTCACAAGCTGGTCTATGAG 60.430 52.174 0.00 0.00 35.87 2.90
632 633 3.445450 GTCTCACAAGCTGGTCTATGAGA 59.555 47.826 5.28 5.28 40.09 3.27
633 634 3.445450 TCTCACAAGCTGGTCTATGAGAC 59.555 47.826 5.28 0.00 44.32 3.36
651 652 4.569719 AGACCCGGTCTCATACAATTTT 57.430 40.909 14.84 0.00 38.71 1.82
652 653 4.918588 AGACCCGGTCTCATACAATTTTT 58.081 39.130 14.84 0.00 38.71 1.94
699 700 3.703127 ACGGAGGGAAACGGAGGC 61.703 66.667 0.00 0.00 0.00 4.70
702 703 2.660802 GAGGGAAACGGAGGCGAA 59.339 61.111 0.00 0.00 0.00 4.70
761 762 1.605451 ATGGTGTGGACGGACGAGA 60.605 57.895 0.00 0.00 0.00 4.04
762 763 1.874345 ATGGTGTGGACGGACGAGAC 61.874 60.000 0.00 0.00 0.00 3.36
763 764 2.126965 GTGTGGACGGACGAGACG 60.127 66.667 0.00 0.00 37.36 4.18
764 765 2.281002 TGTGGACGGACGAGACGA 60.281 61.111 0.00 0.00 34.93 4.20
765 766 2.322830 TGTGGACGGACGAGACGAG 61.323 63.158 0.00 0.00 34.93 4.18
771 772 0.176219 ACGGACGAGACGAGAGAGAT 59.824 55.000 0.00 0.00 34.93 2.75
822 839 3.825623 GGGGCTGGAAGGGGATGG 61.826 72.222 0.00 0.00 0.00 3.51
823 840 3.023735 GGGCTGGAAGGGGATGGT 61.024 66.667 0.00 0.00 0.00 3.55
825 842 1.709994 GGGCTGGAAGGGGATGGTAG 61.710 65.000 0.00 0.00 0.00 3.18
837 854 3.981375 GGGGATGGTAGGAGATAAGGTTT 59.019 47.826 0.00 0.00 0.00 3.27
846 863 2.431057 GGAGATAAGGTTTGCGAGGAGA 59.569 50.000 0.00 0.00 0.00 3.71
847 864 3.491792 GGAGATAAGGTTTGCGAGGAGAG 60.492 52.174 0.00 0.00 0.00 3.20
854 871 2.168728 GGTTTGCGAGGAGAGATAAGGT 59.831 50.000 0.00 0.00 0.00 3.50
855 872 3.383825 GGTTTGCGAGGAGAGATAAGGTA 59.616 47.826 0.00 0.00 0.00 3.08
857 874 2.219458 TGCGAGGAGAGATAAGGTACG 58.781 52.381 0.00 0.00 0.00 3.67
876 893 1.665916 CGAGGTGAGCAGTGTGTGG 60.666 63.158 0.00 0.00 0.00 4.17
896 913 4.424566 GGGCGCCTGTCGTACGAA 62.425 66.667 28.56 9.57 41.07 3.85
902 919 1.077089 GCCTGTCGTACGAAGAAGCC 61.077 60.000 21.39 6.96 0.00 4.35
903 920 0.242825 CCTGTCGTACGAAGAAGCCA 59.757 55.000 21.39 11.53 0.00 4.75
906 923 1.058404 GTCGTACGAAGAAGCCACAC 58.942 55.000 21.39 0.00 0.00 3.82
924 941 1.135139 CACGTGAGAGATTGGATCGGT 59.865 52.381 10.90 0.00 0.00 4.69
925 942 1.405821 ACGTGAGAGATTGGATCGGTC 59.594 52.381 0.00 0.00 0.00 4.79
926 943 1.405463 CGTGAGAGATTGGATCGGTCA 59.595 52.381 0.00 0.00 0.00 4.02
927 944 2.542618 CGTGAGAGATTGGATCGGTCAG 60.543 54.545 0.00 0.00 30.05 3.51
928 945 2.034878 TGAGAGATTGGATCGGTCAGG 58.965 52.381 0.00 0.00 0.00 3.86
929 946 1.342819 GAGAGATTGGATCGGTCAGGG 59.657 57.143 0.00 0.00 0.00 4.45
930 947 1.123928 GAGATTGGATCGGTCAGGGT 58.876 55.000 0.00 0.00 0.00 4.34
951 968 0.600057 ACCCGAGTCCAGTCGTTTAC 59.400 55.000 3.24 0.00 38.32 2.01
956 973 2.485426 CGAGTCCAGTCGTTTACCTGTA 59.515 50.000 0.00 0.00 35.14 2.74
957 974 3.058016 CGAGTCCAGTCGTTTACCTGTAA 60.058 47.826 0.00 0.00 35.14 2.41
968 985 5.944599 TCGTTTACCTGTAAATAAATGCCCA 59.055 36.000 5.83 0.00 37.37 5.36
993 1010 1.086634 GGTCTGAATGCCTCGACAGC 61.087 60.000 0.00 0.00 32.55 4.40
1015 1032 1.098050 GCTCATGACCAATCACCCAC 58.902 55.000 0.00 0.00 37.79 4.61
1076 1102 2.815647 CGTGCCGGAAGAAGGAGC 60.816 66.667 5.05 0.00 0.00 4.70
1207 1236 2.572284 CCGACGACACCTTCCTCC 59.428 66.667 0.00 0.00 0.00 4.30
1398 1427 3.855853 GAGAAGCTCGCCTCCCCC 61.856 72.222 0.00 0.00 0.00 5.40
1506 1535 0.790207 CCAAGGATGTGTTCGTGTCG 59.210 55.000 0.00 0.00 0.00 4.35
1689 1730 1.595382 CGAGATGATGGCCGAACCC 60.595 63.158 0.00 0.00 37.83 4.11
1947 1988 4.732938 GCAAAGAAGCTAGATGCCATTGTC 60.733 45.833 0.00 0.00 44.23 3.18
1956 1997 2.237143 AGATGCCATTGTCGAGGAGAAA 59.763 45.455 0.00 0.00 0.00 2.52
2006 2048 2.604046 ATCGGTGTCATAGCTTCACC 57.396 50.000 15.36 15.36 45.46 4.02
2082 2139 8.433421 TGTTTTGTTAACCTTTTGTTTTGTCA 57.567 26.923 2.48 0.00 38.42 3.58
2092 2149 8.269966 AACCTTTTGTTTTGTCACATTGACTCC 61.270 37.037 7.77 0.00 40.18 3.85
2158 2215 4.141733 CCATGGGGGCCAAATACTTTTTAG 60.142 45.833 4.39 0.00 36.95 1.85
2161 2218 5.018149 TGGGGGCCAAATACTTTTTAGTAC 58.982 41.667 4.39 0.00 0.00 2.73
2165 2222 7.310796 GGGGGCCAAATACTTTTTAGTACAAAT 60.311 37.037 4.39 0.00 0.00 2.32
2166 2223 8.751242 GGGGCCAAATACTTTTTAGTACAAATA 58.249 33.333 4.39 0.00 0.00 1.40
2205 2262 1.305201 ACAGGCAAAACAGGTACGTG 58.695 50.000 13.84 13.84 0.00 4.49
2209 2266 1.263217 GGCAAAACAGGTACGTGTCTG 59.737 52.381 20.61 19.69 37.07 3.51
2210 2267 1.937899 GCAAAACAGGTACGTGTCTGT 59.062 47.619 20.61 16.47 45.06 3.41
2216 2273 1.607148 CAGGTACGTGTCTGTGACTGA 59.393 52.381 7.41 0.00 33.15 3.41
2269 2912 9.881649 AGATATCGACTGATATTATTTGTGCAT 57.118 29.630 0.00 0.00 45.66 3.96
2293 2936 5.782047 TGACCAGGAATTTGTTGCTATTTG 58.218 37.500 0.00 0.00 0.00 2.32
2299 2942 6.366877 CAGGAATTTGTTGCTATTTGTTGAGG 59.633 38.462 0.00 0.00 0.00 3.86
2326 2969 5.167121 CAAAGATGTCTAGCCGATATCAGG 58.833 45.833 3.12 6.40 41.28 3.86
2363 3578 1.102978 ATTGCTAATGGCCCGTGAAC 58.897 50.000 0.00 0.00 40.92 3.18
2379 3594 6.816640 GCCCGTGAACTTATTGCTATATATCA 59.183 38.462 0.00 0.00 0.00 2.15
2400 3615 9.745018 ATATCATAGATTGACCTGGTTTATTGG 57.255 33.333 0.00 0.00 37.11 3.16
2401 3616 5.827797 TCATAGATTGACCTGGTTTATTGGC 59.172 40.000 0.00 0.00 0.00 4.52
2565 3809 6.538945 AACTGTGTAAGGTTCCATGTTTTT 57.461 33.333 0.00 0.00 0.00 1.94
2566 3810 7.648039 AACTGTGTAAGGTTCCATGTTTTTA 57.352 32.000 0.00 0.00 0.00 1.52
2572 4858 8.578151 GTGTAAGGTTCCATGTTTTTATACCAA 58.422 33.333 0.00 0.00 0.00 3.67
2621 4924 4.078922 TGGCATCCCCATTTTCAGGTATAA 60.079 41.667 0.00 0.00 39.18 0.98
2626 4929 8.088365 GCATCCCCATTTTCAGGTATAATTAAC 58.912 37.037 0.00 0.00 0.00 2.01
2629 4932 9.722317 TCCCCATTTTCAGGTATAATTAACAAT 57.278 29.630 0.00 0.00 0.00 2.71
2705 5009 7.201794 GGGTTATTTAGACATTTAGTTGGAGGC 60.202 40.741 0.00 0.00 0.00 4.70
2708 5012 1.003118 AGACATTTAGTTGGAGGCGCA 59.997 47.619 10.83 0.00 0.00 6.09
2713 5017 4.644685 ACATTTAGTTGGAGGCGCAATATT 59.355 37.500 10.83 0.00 0.00 1.28
2729 5033 6.288419 CGCAATATTTTGTTACAACACTTGC 58.712 36.000 16.60 16.60 38.92 4.01
2733 5037 9.583530 CAATATTTTGTTACAACACTTGCATTG 57.416 29.630 0.00 0.00 38.92 2.82
2767 5071 5.182380 CCAAACCAAACGTGTCATATTACCT 59.818 40.000 0.00 0.00 0.00 3.08
2799 5103 9.523168 TTAGTTTATACCCTTTAATGTGTTGCT 57.477 29.630 0.00 0.00 0.00 3.91
2817 5121 5.919707 TGTTGCTGTGCAGTTATATGTTTTG 59.080 36.000 0.00 0.00 40.61 2.44
2818 5122 5.703978 TGCTGTGCAGTTATATGTTTTGT 57.296 34.783 0.00 0.00 33.32 2.83
2819 5123 5.459768 TGCTGTGCAGTTATATGTTTTGTG 58.540 37.500 0.00 0.00 33.32 3.33
2820 5124 5.009510 TGCTGTGCAGTTATATGTTTTGTGT 59.990 36.000 0.00 0.00 33.32 3.72
2899 5206 7.723616 TCTTGAGAACCAATATTTTTGTCCTGA 59.276 33.333 0.00 0.00 33.68 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 4.233789 TGACATTGGTGATTTAAAAGCGC 58.766 39.130 0.00 0.00 0.00 5.92
5 6 6.761731 TTTGACATTGGTGATTTAAAAGCG 57.238 33.333 0.00 0.00 0.00 4.68
8 9 9.213799 GCCTTATTTGACATTGGTGATTTAAAA 57.786 29.630 0.00 0.00 0.00 1.52
9 10 8.592809 AGCCTTATTTGACATTGGTGATTTAAA 58.407 29.630 0.00 0.00 0.00 1.52
10 11 8.034215 CAGCCTTATTTGACATTGGTGATTTAA 58.966 33.333 0.00 0.00 0.00 1.52
11 12 7.178274 ACAGCCTTATTTGACATTGGTGATTTA 59.822 33.333 0.00 0.00 0.00 1.40
12 13 6.014327 ACAGCCTTATTTGACATTGGTGATTT 60.014 34.615 0.00 0.00 0.00 2.17
13 14 5.481473 ACAGCCTTATTTGACATTGGTGATT 59.519 36.000 0.00 0.00 0.00 2.57
14 15 5.018809 ACAGCCTTATTTGACATTGGTGAT 58.981 37.500 0.00 0.00 0.00 3.06
15 16 4.406456 ACAGCCTTATTTGACATTGGTGA 58.594 39.130 0.00 0.00 0.00 4.02
16 17 4.460382 AGACAGCCTTATTTGACATTGGTG 59.540 41.667 0.00 0.00 0.00 4.17
17 18 4.666512 AGACAGCCTTATTTGACATTGGT 58.333 39.130 0.00 0.00 0.00 3.67
18 19 5.649782 AAGACAGCCTTATTTGACATTGG 57.350 39.130 0.00 0.00 32.24 3.16
19 20 7.820648 AGTTAAGACAGCCTTATTTGACATTG 58.179 34.615 0.00 0.00 37.22 2.82
20 21 8.409358 AAGTTAAGACAGCCTTATTTGACATT 57.591 30.769 0.00 0.00 37.22 2.71
21 22 7.121315 GGAAGTTAAGACAGCCTTATTTGACAT 59.879 37.037 0.00 0.00 37.22 3.06
22 23 6.430000 GGAAGTTAAGACAGCCTTATTTGACA 59.570 38.462 0.00 0.00 37.22 3.58
23 24 6.655425 AGGAAGTTAAGACAGCCTTATTTGAC 59.345 38.462 0.00 0.00 37.22 3.18
24 25 6.779860 AGGAAGTTAAGACAGCCTTATTTGA 58.220 36.000 0.00 0.00 37.22 2.69
25 26 6.881602 AGAGGAAGTTAAGACAGCCTTATTTG 59.118 38.462 0.00 0.00 37.22 2.32
26 27 7.021998 AGAGGAAGTTAAGACAGCCTTATTT 57.978 36.000 0.00 0.00 37.22 1.40
27 28 6.628644 AGAGGAAGTTAAGACAGCCTTATT 57.371 37.500 0.00 0.00 37.22 1.40
28 29 6.442244 AGAAGAGGAAGTTAAGACAGCCTTAT 59.558 38.462 0.00 0.00 37.22 1.73
29 30 5.780793 AGAAGAGGAAGTTAAGACAGCCTTA 59.219 40.000 0.00 0.00 36.34 2.69
30 31 4.595350 AGAAGAGGAAGTTAAGACAGCCTT 59.405 41.667 0.00 0.00 38.87 4.35
31 32 4.020662 CAGAAGAGGAAGTTAAGACAGCCT 60.021 45.833 0.00 0.00 35.21 4.58
32 33 4.249661 CAGAAGAGGAAGTTAAGACAGCC 58.750 47.826 0.00 0.00 0.00 4.85
33 34 4.888917 ACAGAAGAGGAAGTTAAGACAGC 58.111 43.478 0.00 0.00 0.00 4.40
34 35 9.743057 CATATACAGAAGAGGAAGTTAAGACAG 57.257 37.037 0.00 0.00 0.00 3.51
35 36 8.696374 CCATATACAGAAGAGGAAGTTAAGACA 58.304 37.037 0.00 0.00 0.00 3.41
36 37 8.145122 CCCATATACAGAAGAGGAAGTTAAGAC 58.855 40.741 0.00 0.00 0.00 3.01
37 38 7.290248 CCCCATATACAGAAGAGGAAGTTAAGA 59.710 40.741 0.00 0.00 0.00 2.10
38 39 7.445945 CCCCATATACAGAAGAGGAAGTTAAG 58.554 42.308 0.00 0.00 0.00 1.85
39 40 6.183361 GCCCCATATACAGAAGAGGAAGTTAA 60.183 42.308 0.00 0.00 0.00 2.01
40 41 5.307196 GCCCCATATACAGAAGAGGAAGTTA 59.693 44.000 0.00 0.00 0.00 2.24
41 42 4.103311 GCCCCATATACAGAAGAGGAAGTT 59.897 45.833 0.00 0.00 0.00 2.66
42 43 3.648545 GCCCCATATACAGAAGAGGAAGT 59.351 47.826 0.00 0.00 0.00 3.01
43 44 3.008485 GGCCCCATATACAGAAGAGGAAG 59.992 52.174 0.00 0.00 0.00 3.46
44 45 2.979678 GGCCCCATATACAGAAGAGGAA 59.020 50.000 0.00 0.00 0.00 3.36
45 46 2.090210 TGGCCCCATATACAGAAGAGGA 60.090 50.000 0.00 0.00 0.00 3.71
46 47 2.338809 TGGCCCCATATACAGAAGAGG 58.661 52.381 0.00 0.00 0.00 3.69
47 48 3.584406 TCATGGCCCCATATACAGAAGAG 59.416 47.826 0.00 0.00 34.91 2.85
48 49 3.584406 CTCATGGCCCCATATACAGAAGA 59.416 47.826 0.00 0.00 34.91 2.87
49 50 3.307975 CCTCATGGCCCCATATACAGAAG 60.308 52.174 0.00 0.00 34.91 2.85
50 51 2.644299 CCTCATGGCCCCATATACAGAA 59.356 50.000 0.00 0.00 34.91 3.02
51 52 2.269023 CCTCATGGCCCCATATACAGA 58.731 52.381 0.00 0.00 34.91 3.41
52 53 1.283029 CCCTCATGGCCCCATATACAG 59.717 57.143 0.00 0.00 34.91 2.74
53 54 1.371467 CCCTCATGGCCCCATATACA 58.629 55.000 0.00 0.00 34.91 2.29
64 65 2.986534 AATGAATAGGGCCCTCATGG 57.013 50.000 32.80 0.00 30.28 3.66
65 66 3.836146 TGAAATGAATAGGGCCCTCATG 58.164 45.455 32.80 0.00 30.28 3.07
66 67 4.754411 ATGAAATGAATAGGGCCCTCAT 57.246 40.909 32.80 23.58 0.00 2.90
67 68 5.074929 ACATATGAAATGAATAGGGCCCTCA 59.925 40.000 32.80 22.19 0.00 3.86
68 69 5.574188 ACATATGAAATGAATAGGGCCCTC 58.426 41.667 32.80 16.14 0.00 4.30
69 70 5.517299 GGACATATGAAATGAATAGGGCCCT 60.517 44.000 31.35 31.35 34.07 5.19
70 71 4.706962 GGACATATGAAATGAATAGGGCCC 59.293 45.833 16.46 16.46 34.07 5.80
71 72 4.706962 GGGACATATGAAATGAATAGGGCC 59.293 45.833 10.38 0.00 38.50 5.80
72 73 5.574188 AGGGACATATGAAATGAATAGGGC 58.426 41.667 10.38 0.00 0.00 5.19
73 74 9.759473 ATTAAGGGACATATGAAATGAATAGGG 57.241 33.333 10.38 0.00 0.00 3.53
76 77 9.753674 GGGATTAAGGGACATATGAAATGAATA 57.246 33.333 10.38 0.00 0.00 1.75
77 78 8.459394 AGGGATTAAGGGACATATGAAATGAAT 58.541 33.333 10.38 1.89 0.00 2.57
78 79 7.825709 AGGGATTAAGGGACATATGAAATGAA 58.174 34.615 10.38 0.00 0.00 2.57
79 80 7.406620 AGGGATTAAGGGACATATGAAATGA 57.593 36.000 10.38 0.00 0.00 2.57
80 81 9.586732 TTAAGGGATTAAGGGACATATGAAATG 57.413 33.333 10.38 0.00 0.00 2.32
82 83 9.807921 GATTAAGGGATTAAGGGACATATGAAA 57.192 33.333 10.38 0.00 0.00 2.69
83 84 9.182642 AGATTAAGGGATTAAGGGACATATGAA 57.817 33.333 10.38 0.00 0.00 2.57
84 85 8.757307 AGATTAAGGGATTAAGGGACATATGA 57.243 34.615 10.38 0.00 0.00 2.15
85 86 8.830741 AGAGATTAAGGGATTAAGGGACATATG 58.169 37.037 0.00 0.00 0.00 1.78
86 87 8.997301 AGAGATTAAGGGATTAAGGGACATAT 57.003 34.615 0.00 0.00 0.00 1.78
87 88 8.242325 AGAGAGATTAAGGGATTAAGGGACATA 58.758 37.037 0.00 0.00 0.00 2.29
88 89 7.085601 AGAGAGATTAAGGGATTAAGGGACAT 58.914 38.462 0.00 0.00 0.00 3.06
89 90 6.453476 AGAGAGATTAAGGGATTAAGGGACA 58.547 40.000 0.00 0.00 0.00 4.02
90 91 6.555360 TGAGAGAGATTAAGGGATTAAGGGAC 59.445 42.308 0.00 0.00 0.00 4.46
91 92 6.693599 TGAGAGAGATTAAGGGATTAAGGGA 58.306 40.000 0.00 0.00 0.00 4.20
92 93 6.784969 TCTGAGAGAGATTAAGGGATTAAGGG 59.215 42.308 0.00 0.00 0.00 3.95
93 94 7.847711 TCTGAGAGAGATTAAGGGATTAAGG 57.152 40.000 0.00 0.00 0.00 2.69
94 95 9.709495 CATTCTGAGAGAGATTAAGGGATTAAG 57.291 37.037 0.00 0.00 0.00 1.85
95 96 8.153550 GCATTCTGAGAGAGATTAAGGGATTAA 58.846 37.037 0.00 0.00 0.00 1.40
96 97 7.290948 TGCATTCTGAGAGAGATTAAGGGATTA 59.709 37.037 0.00 0.00 0.00 1.75
97 98 6.100859 TGCATTCTGAGAGAGATTAAGGGATT 59.899 38.462 0.00 0.00 0.00 3.01
98 99 5.605908 TGCATTCTGAGAGAGATTAAGGGAT 59.394 40.000 0.00 0.00 0.00 3.85
99 100 4.964897 TGCATTCTGAGAGAGATTAAGGGA 59.035 41.667 0.00 0.00 0.00 4.20
100 101 5.055812 GTGCATTCTGAGAGAGATTAAGGG 58.944 45.833 0.00 0.00 0.00 3.95
101 102 5.754406 CAGTGCATTCTGAGAGAGATTAAGG 59.246 44.000 0.00 0.00 37.61 2.69
102 103 5.234757 GCAGTGCATTCTGAGAGAGATTAAG 59.765 44.000 11.09 0.00 37.61 1.85
103 104 5.114780 GCAGTGCATTCTGAGAGAGATTAA 58.885 41.667 11.09 0.00 37.61 1.40
104 105 4.442612 GGCAGTGCATTCTGAGAGAGATTA 60.443 45.833 18.61 0.00 37.61 1.75
105 106 3.533547 GCAGTGCATTCTGAGAGAGATT 58.466 45.455 11.09 0.00 37.61 2.40
106 107 2.158928 GGCAGTGCATTCTGAGAGAGAT 60.159 50.000 18.61 0.00 37.61 2.75
107 108 1.206610 GGCAGTGCATTCTGAGAGAGA 59.793 52.381 18.61 0.00 37.61 3.10
108 109 1.654317 GGCAGTGCATTCTGAGAGAG 58.346 55.000 18.61 0.00 37.61 3.20
109 110 0.108472 CGGCAGTGCATTCTGAGAGA 60.108 55.000 18.61 0.00 37.61 3.10
116 117 1.305219 TAACAGCCGGCAGTGCATTC 61.305 55.000 31.54 4.51 0.00 2.67
157 158 4.378046 CCCGTCGGTCATTTTAAAGACAAG 60.378 45.833 11.06 3.98 36.50 3.16
164 165 0.036448 TGGCCCGTCGGTCATTTTAA 59.964 50.000 11.06 0.00 39.48 1.52
165 166 1.678137 TGGCCCGTCGGTCATTTTA 59.322 52.632 11.06 0.00 39.48 1.52
202 203 2.197643 GACGCCGTTCTCTTCTCCGT 62.198 60.000 0.00 0.00 0.00 4.69
204 205 1.153804 GGACGCCGTTCTCTTCTCC 60.154 63.158 0.00 0.00 0.00 3.71
212 213 0.511653 GAAAGAAGTGGACGCCGTTC 59.488 55.000 0.00 0.00 0.00 3.95
223 224 1.228657 GGCGGTTGAGCGAAAGAAGT 61.229 55.000 6.79 0.00 38.18 3.01
254 255 0.741927 TGATGTGCGCTGATGTGAGG 60.742 55.000 9.73 0.00 0.00 3.86
281 282 4.101790 CACCACGTTCATGGCGGC 62.102 66.667 0.00 0.00 44.33 6.53
282 283 2.668212 ACACCACGTTCATGGCGG 60.668 61.111 13.42 1.51 44.33 6.13
284 285 2.677003 CGGACACCACGTTCATGGC 61.677 63.158 0.00 0.00 44.33 4.40
285 286 2.677003 GCGGACACCACGTTCATGG 61.677 63.158 0.00 0.00 46.10 3.66
287 288 2.358247 GGCGGACACCACGTTCAT 60.358 61.111 0.00 0.00 0.00 2.57
301 302 3.891400 CATGATGTTGGCCCGGCG 61.891 66.667 0.00 0.00 0.00 6.46
308 309 1.270094 GGATGCATGCCATGATGTTGG 60.270 52.381 16.68 0.00 39.94 3.77
309 310 1.601914 CGGATGCATGCCATGATGTTG 60.602 52.381 16.68 0.00 33.29 3.33
311 312 1.802337 GCGGATGCATGCCATGATGT 61.802 55.000 16.68 0.00 42.15 3.06
319 320 2.908428 TCCATGGCGGATGCATGC 60.908 61.111 11.82 11.82 45.35 4.06
356 357 2.881352 GAAGAAGCTCGTCGCCGG 60.881 66.667 0.00 0.00 40.39 6.13
358 359 2.881352 CCGAAGAAGCTCGTCGCC 60.881 66.667 13.10 0.00 44.77 5.54
363 364 2.580867 CCTCGCCGAAGAAGCTCG 60.581 66.667 0.00 0.00 38.58 5.03
366 367 1.153549 ATGACCTCGCCGAAGAAGC 60.154 57.895 0.00 0.00 0.00 3.86
367 368 0.173481 TCATGACCTCGCCGAAGAAG 59.827 55.000 0.00 0.00 0.00 2.85
368 369 0.606096 TTCATGACCTCGCCGAAGAA 59.394 50.000 0.00 0.00 0.00 2.52
369 370 0.606096 TTTCATGACCTCGCCGAAGA 59.394 50.000 0.00 0.00 0.00 2.87
371 372 0.606096 TCTTTCATGACCTCGCCGAA 59.394 50.000 0.00 0.00 0.00 4.30
373 374 0.173481 TCTCTTTCATGACCTCGCCG 59.827 55.000 0.00 0.00 0.00 6.46
375 376 1.205893 ACCTCTCTTTCATGACCTCGC 59.794 52.381 0.00 0.00 0.00 5.03
376 377 2.159170 GGACCTCTCTTTCATGACCTCG 60.159 54.545 0.00 0.00 0.00 4.63
378 379 3.103742 GAGGACCTCTCTTTCATGACCT 58.896 50.000 14.72 0.00 39.38 3.85
379 380 2.159170 CGAGGACCTCTCTTTCATGACC 60.159 54.545 19.39 0.00 40.30 4.02
381 382 1.478510 GCGAGGACCTCTCTTTCATGA 59.521 52.381 19.39 0.00 40.30 3.07
383 384 1.480137 CAGCGAGGACCTCTCTTTCAT 59.520 52.381 19.39 0.00 40.30 2.57
384 385 0.891373 CAGCGAGGACCTCTCTTTCA 59.109 55.000 19.39 0.00 40.30 2.69
385 386 0.459411 GCAGCGAGGACCTCTCTTTC 60.459 60.000 19.39 7.26 40.30 2.62
386 387 0.902516 AGCAGCGAGGACCTCTCTTT 60.903 55.000 19.39 4.85 40.30 2.52
388 389 2.051518 CAGCAGCGAGGACCTCTCT 61.052 63.158 19.39 14.08 40.30 3.10
390 391 3.768922 GCAGCAGCGAGGACCTCT 61.769 66.667 19.39 0.00 0.00 3.69
445 446 4.910585 GGGTCTATGGCGGCCACG 62.911 72.222 26.48 18.37 44.63 4.94
446 447 3.792736 TGGGTCTATGGCGGCCAC 61.793 66.667 26.48 11.61 35.80 5.01
447 448 3.792736 GTGGGTCTATGGCGGCCA 61.793 66.667 26.11 26.11 38.19 5.36
448 449 4.910585 CGTGGGTCTATGGCGGCC 62.911 72.222 13.32 13.32 0.00 6.13
449 450 2.788640 TACGTGGGTCTATGGCGGC 61.789 63.158 0.00 0.00 0.00 6.53
450 451 1.066918 GTACGTGGGTCTATGGCGG 59.933 63.158 0.00 0.00 0.00 6.13
451 452 1.066918 GGTACGTGGGTCTATGGCG 59.933 63.158 0.00 0.00 0.00 5.69
452 453 1.696063 TAGGTACGTGGGTCTATGGC 58.304 55.000 0.00 0.00 0.00 4.40
453 454 5.319453 TCTAATAGGTACGTGGGTCTATGG 58.681 45.833 0.00 0.00 0.00 2.74
454 455 5.106237 GCTCTAATAGGTACGTGGGTCTATG 60.106 48.000 0.00 0.00 0.00 2.23
455 456 5.008980 GCTCTAATAGGTACGTGGGTCTAT 58.991 45.833 0.00 0.00 0.00 1.98
456 457 4.392940 GCTCTAATAGGTACGTGGGTCTA 58.607 47.826 0.00 0.00 0.00 2.59
457 458 3.220940 GCTCTAATAGGTACGTGGGTCT 58.779 50.000 0.00 0.00 0.00 3.85
458 459 2.031333 CGCTCTAATAGGTACGTGGGTC 60.031 54.545 0.00 0.00 0.00 4.46
459 460 1.952296 CGCTCTAATAGGTACGTGGGT 59.048 52.381 0.00 0.00 0.00 4.51
460 461 2.224606 TCGCTCTAATAGGTACGTGGG 58.775 52.381 0.00 0.00 0.00 4.61
461 462 3.501062 TCATCGCTCTAATAGGTACGTGG 59.499 47.826 0.00 0.00 0.00 4.94
462 463 4.744136 TCATCGCTCTAATAGGTACGTG 57.256 45.455 0.00 0.00 0.00 4.49
463 464 4.215827 CCTTCATCGCTCTAATAGGTACGT 59.784 45.833 0.00 0.00 0.00 3.57
464 465 4.454847 TCCTTCATCGCTCTAATAGGTACG 59.545 45.833 0.00 0.00 0.00 3.67
465 466 5.961396 TCCTTCATCGCTCTAATAGGTAC 57.039 43.478 0.00 0.00 0.00 3.34
466 467 6.010850 ACATCCTTCATCGCTCTAATAGGTA 58.989 40.000 0.00 0.00 0.00 3.08
467 468 4.835615 ACATCCTTCATCGCTCTAATAGGT 59.164 41.667 0.00 0.00 0.00 3.08
468 469 5.398603 ACATCCTTCATCGCTCTAATAGG 57.601 43.478 0.00 0.00 0.00 2.57
469 470 6.024664 CGTACATCCTTCATCGCTCTAATAG 58.975 44.000 0.00 0.00 0.00 1.73
470 471 5.472478 ACGTACATCCTTCATCGCTCTAATA 59.528 40.000 0.00 0.00 0.00 0.98
471 472 4.278669 ACGTACATCCTTCATCGCTCTAAT 59.721 41.667 0.00 0.00 0.00 1.73
472 473 3.630769 ACGTACATCCTTCATCGCTCTAA 59.369 43.478 0.00 0.00 0.00 2.10
473 474 3.211865 ACGTACATCCTTCATCGCTCTA 58.788 45.455 0.00 0.00 0.00 2.43
474 475 2.025155 ACGTACATCCTTCATCGCTCT 58.975 47.619 0.00 0.00 0.00 4.09
475 476 2.493713 ACGTACATCCTTCATCGCTC 57.506 50.000 0.00 0.00 0.00 5.03
476 477 2.286831 CGTACGTACATCCTTCATCGCT 60.287 50.000 24.50 0.00 0.00 4.93
477 478 2.041966 CGTACGTACATCCTTCATCGC 58.958 52.381 24.50 0.00 0.00 4.58
478 479 3.329743 ACGTACGTACATCCTTCATCG 57.670 47.619 21.41 9.59 0.00 3.84
493 494 2.423538 AGAACCCCACATACGTACGTAC 59.576 50.000 28.99 15.90 33.01 3.67
494 495 2.423185 CAGAACCCCACATACGTACGTA 59.577 50.000 28.62 28.62 34.87 3.57
495 496 1.203052 CAGAACCCCACATACGTACGT 59.797 52.381 25.98 25.98 0.00 3.57
496 497 1.470285 CCAGAACCCCACATACGTACG 60.470 57.143 15.01 15.01 0.00 3.67
497 498 1.826720 TCCAGAACCCCACATACGTAC 59.173 52.381 0.00 0.00 0.00 3.67
498 499 2.234896 TCCAGAACCCCACATACGTA 57.765 50.000 0.00 0.00 0.00 3.57
499 500 1.354101 TTCCAGAACCCCACATACGT 58.646 50.000 0.00 0.00 0.00 3.57
500 501 2.561569 GATTCCAGAACCCCACATACG 58.438 52.381 0.00 0.00 0.00 3.06
501 502 2.561569 CGATTCCAGAACCCCACATAC 58.438 52.381 0.00 0.00 0.00 2.39
502 503 1.488812 CCGATTCCAGAACCCCACATA 59.511 52.381 0.00 0.00 0.00 2.29
503 504 0.255890 CCGATTCCAGAACCCCACAT 59.744 55.000 0.00 0.00 0.00 3.21
504 505 1.682849 CCGATTCCAGAACCCCACA 59.317 57.895 0.00 0.00 0.00 4.17
505 506 1.077716 CCCGATTCCAGAACCCCAC 60.078 63.158 0.00 0.00 0.00 4.61
506 507 0.842905 TTCCCGATTCCAGAACCCCA 60.843 55.000 0.00 0.00 0.00 4.96
507 508 0.551396 ATTCCCGATTCCAGAACCCC 59.449 55.000 0.00 0.00 0.00 4.95
508 509 1.211949 TGATTCCCGATTCCAGAACCC 59.788 52.381 0.00 0.00 0.00 4.11
509 510 2.565841 CTGATTCCCGATTCCAGAACC 58.434 52.381 0.00 0.00 0.00 3.62
510 511 1.943340 GCTGATTCCCGATTCCAGAAC 59.057 52.381 0.00 0.00 0.00 3.01
511 512 1.839994 AGCTGATTCCCGATTCCAGAA 59.160 47.619 0.00 0.00 0.00 3.02
512 513 1.139654 CAGCTGATTCCCGATTCCAGA 59.860 52.381 8.42 0.00 0.00 3.86
513 514 1.134280 ACAGCTGATTCCCGATTCCAG 60.134 52.381 23.35 0.00 0.00 3.86
514 515 0.911769 ACAGCTGATTCCCGATTCCA 59.088 50.000 23.35 0.00 0.00 3.53
515 516 1.672881 CAACAGCTGATTCCCGATTCC 59.327 52.381 23.35 0.00 0.00 3.01
516 517 1.672881 CCAACAGCTGATTCCCGATTC 59.327 52.381 23.35 0.00 0.00 2.52
517 518 1.683011 CCCAACAGCTGATTCCCGATT 60.683 52.381 23.35 0.00 0.00 3.34
518 519 0.107017 CCCAACAGCTGATTCCCGAT 60.107 55.000 23.35 0.00 0.00 4.18
519 520 1.198094 TCCCAACAGCTGATTCCCGA 61.198 55.000 23.35 4.83 0.00 5.14
520 521 0.107017 ATCCCAACAGCTGATTCCCG 60.107 55.000 23.35 2.31 0.00 5.14
521 522 1.753073 CAATCCCAACAGCTGATTCCC 59.247 52.381 23.35 0.00 0.00 3.97
522 523 2.686915 CTCAATCCCAACAGCTGATTCC 59.313 50.000 23.35 0.00 0.00 3.01
523 524 3.614092 TCTCAATCCCAACAGCTGATTC 58.386 45.455 23.35 0.00 0.00 2.52
524 525 3.726557 TCTCAATCCCAACAGCTGATT 57.273 42.857 23.35 6.21 0.00 2.57
525 526 3.201487 TGATCTCAATCCCAACAGCTGAT 59.799 43.478 23.35 5.41 0.00 2.90
526 527 2.573009 TGATCTCAATCCCAACAGCTGA 59.427 45.455 23.35 0.00 0.00 4.26
527 528 2.943690 CTGATCTCAATCCCAACAGCTG 59.056 50.000 13.48 13.48 0.00 4.24
528 529 2.842496 TCTGATCTCAATCCCAACAGCT 59.158 45.455 0.00 0.00 0.00 4.24
529 530 2.941720 GTCTGATCTCAATCCCAACAGC 59.058 50.000 0.00 0.00 0.00 4.40
530 531 3.193263 CGTCTGATCTCAATCCCAACAG 58.807 50.000 0.00 0.00 0.00 3.16
531 532 2.567169 ACGTCTGATCTCAATCCCAACA 59.433 45.455 0.00 0.00 0.00 3.33
532 533 2.932614 CACGTCTGATCTCAATCCCAAC 59.067 50.000 0.00 0.00 0.00 3.77
533 534 2.831526 TCACGTCTGATCTCAATCCCAA 59.168 45.455 0.00 0.00 0.00 4.12
534 535 2.456577 TCACGTCTGATCTCAATCCCA 58.543 47.619 0.00 0.00 0.00 4.37
535 536 3.118956 ACTTCACGTCTGATCTCAATCCC 60.119 47.826 0.00 0.00 0.00 3.85
536 537 3.862267 CACTTCACGTCTGATCTCAATCC 59.138 47.826 0.00 0.00 0.00 3.01
537 538 3.862267 CCACTTCACGTCTGATCTCAATC 59.138 47.826 0.00 0.00 0.00 2.67
538 539 3.368843 CCCACTTCACGTCTGATCTCAAT 60.369 47.826 0.00 0.00 0.00 2.57
539 540 2.029020 CCCACTTCACGTCTGATCTCAA 60.029 50.000 0.00 0.00 0.00 3.02
540 541 1.546029 CCCACTTCACGTCTGATCTCA 59.454 52.381 0.00 0.00 0.00 3.27
541 542 1.819288 TCCCACTTCACGTCTGATCTC 59.181 52.381 0.00 0.00 0.00 2.75
542 543 1.924731 TCCCACTTCACGTCTGATCT 58.075 50.000 0.00 0.00 0.00 2.75
543 544 2.969628 ATCCCACTTCACGTCTGATC 57.030 50.000 0.00 0.00 0.00 2.92
544 545 3.133003 CCTAATCCCACTTCACGTCTGAT 59.867 47.826 0.00 0.00 0.00 2.90
545 546 2.496070 CCTAATCCCACTTCACGTCTGA 59.504 50.000 0.00 0.00 0.00 3.27
546 547 2.418746 CCCTAATCCCACTTCACGTCTG 60.419 54.545 0.00 0.00 0.00 3.51
547 548 1.831736 CCCTAATCCCACTTCACGTCT 59.168 52.381 0.00 0.00 0.00 4.18
548 549 1.553704 ACCCTAATCCCACTTCACGTC 59.446 52.381 0.00 0.00 0.00 4.34
549 550 1.278127 CACCCTAATCCCACTTCACGT 59.722 52.381 0.00 0.00 0.00 4.49
550 551 2.012051 GCACCCTAATCCCACTTCACG 61.012 57.143 0.00 0.00 0.00 4.35
551 552 1.282157 AGCACCCTAATCCCACTTCAC 59.718 52.381 0.00 0.00 0.00 3.18
552 553 1.559682 GAGCACCCTAATCCCACTTCA 59.440 52.381 0.00 0.00 0.00 3.02
553 554 1.840635 AGAGCACCCTAATCCCACTTC 59.159 52.381 0.00 0.00 0.00 3.01
554 555 1.561542 CAGAGCACCCTAATCCCACTT 59.438 52.381 0.00 0.00 0.00 3.16
555 556 1.207791 CAGAGCACCCTAATCCCACT 58.792 55.000 0.00 0.00 0.00 4.00
556 557 1.139853 CTCAGAGCACCCTAATCCCAC 59.860 57.143 0.00 0.00 0.00 4.61
557 558 1.008327 TCTCAGAGCACCCTAATCCCA 59.992 52.381 0.00 0.00 0.00 4.37
558 559 1.794714 TCTCAGAGCACCCTAATCCC 58.205 55.000 0.00 0.00 0.00 3.85
559 560 3.135530 ACAATCTCAGAGCACCCTAATCC 59.864 47.826 0.00 0.00 0.00 3.01
560 561 4.376146 GACAATCTCAGAGCACCCTAATC 58.624 47.826 0.00 0.00 0.00 1.75
561 562 3.181471 CGACAATCTCAGAGCACCCTAAT 60.181 47.826 0.00 0.00 0.00 1.73
562 563 2.166459 CGACAATCTCAGAGCACCCTAA 59.834 50.000 0.00 0.00 0.00 2.69
563 564 1.751351 CGACAATCTCAGAGCACCCTA 59.249 52.381 0.00 0.00 0.00 3.53
564 565 0.534412 CGACAATCTCAGAGCACCCT 59.466 55.000 0.00 0.00 0.00 4.34
565 566 0.460987 CCGACAATCTCAGAGCACCC 60.461 60.000 0.00 0.00 0.00 4.61
566 567 0.247736 ACCGACAATCTCAGAGCACC 59.752 55.000 0.00 0.00 0.00 5.01
567 568 1.354040 CACCGACAATCTCAGAGCAC 58.646 55.000 0.00 0.00 0.00 4.40
568 569 0.390340 GCACCGACAATCTCAGAGCA 60.390 55.000 0.00 0.00 0.00 4.26
569 570 1.086634 GGCACCGACAATCTCAGAGC 61.087 60.000 0.00 0.00 0.00 4.09
570 571 0.247460 TGGCACCGACAATCTCAGAG 59.753 55.000 0.00 0.00 0.00 3.35
571 572 0.037326 GTGGCACCGACAATCTCAGA 60.037 55.000 6.29 0.00 0.00 3.27
572 573 0.320683 TGTGGCACCGACAATCTCAG 60.321 55.000 16.26 0.00 0.00 3.35
573 574 0.324614 ATGTGGCACCGACAATCTCA 59.675 50.000 16.26 0.00 0.00 3.27
574 575 0.729116 CATGTGGCACCGACAATCTC 59.271 55.000 16.26 0.00 0.00 2.75
575 576 0.036732 ACATGTGGCACCGACAATCT 59.963 50.000 16.26 0.00 0.00 2.40
576 577 0.447801 GACATGTGGCACCGACAATC 59.552 55.000 16.26 0.58 0.00 2.67
577 578 1.298157 CGACATGTGGCACCGACAAT 61.298 55.000 16.26 0.00 0.00 2.71
578 579 1.958715 CGACATGTGGCACCGACAA 60.959 57.895 16.26 0.00 0.00 3.18
579 580 2.356913 CGACATGTGGCACCGACA 60.357 61.111 16.26 0.00 0.00 4.35
580 581 3.788766 GCGACATGTGGCACCGAC 61.789 66.667 25.73 5.89 34.31 4.79
581 582 3.932580 GAGCGACATGTGGCACCGA 62.933 63.158 30.74 0.00 36.74 4.69
582 583 3.490759 GAGCGACATGTGGCACCG 61.491 66.667 30.74 16.33 36.74 4.94
583 584 1.709147 GATGAGCGACATGTGGCACC 61.709 60.000 30.74 22.23 39.56 5.01
584 585 1.709147 GGATGAGCGACATGTGGCAC 61.709 60.000 30.74 25.50 39.56 5.01
585 586 1.450134 GGATGAGCGACATGTGGCA 60.450 57.895 30.74 14.62 39.56 4.92
586 587 1.026182 TTGGATGAGCGACATGTGGC 61.026 55.000 23.67 23.67 39.56 5.01
587 588 1.671979 ATTGGATGAGCGACATGTGG 58.328 50.000 1.15 2.26 39.56 4.17
588 589 2.804527 CCTATTGGATGAGCGACATGTG 59.195 50.000 1.15 0.00 39.56 3.21
589 590 2.224378 CCCTATTGGATGAGCGACATGT 60.224 50.000 0.00 0.00 39.56 3.21
590 591 2.224378 ACCCTATTGGATGAGCGACATG 60.224 50.000 4.32 0.00 39.56 3.21
591 592 2.037772 GACCCTATTGGATGAGCGACAT 59.962 50.000 0.00 0.00 42.47 3.06
592 593 1.412710 GACCCTATTGGATGAGCGACA 59.587 52.381 0.00 0.00 38.00 4.35
593 594 1.689273 AGACCCTATTGGATGAGCGAC 59.311 52.381 0.00 0.00 38.00 5.19
594 595 1.964223 GAGACCCTATTGGATGAGCGA 59.036 52.381 0.00 0.00 38.00 4.93
595 596 1.688735 TGAGACCCTATTGGATGAGCG 59.311 52.381 0.00 0.00 38.00 5.03
596 597 2.435805 TGTGAGACCCTATTGGATGAGC 59.564 50.000 0.00 0.00 38.00 4.26
597 598 4.701765 CTTGTGAGACCCTATTGGATGAG 58.298 47.826 0.00 0.00 38.00 2.90
598 599 3.118261 GCTTGTGAGACCCTATTGGATGA 60.118 47.826 0.00 0.00 38.00 2.92
599 600 3.118112 AGCTTGTGAGACCCTATTGGATG 60.118 47.826 0.00 0.00 38.00 3.51
600 601 3.118112 CAGCTTGTGAGACCCTATTGGAT 60.118 47.826 0.00 0.00 38.00 3.41
601 602 2.237143 CAGCTTGTGAGACCCTATTGGA 59.763 50.000 0.00 0.00 38.00 3.53
602 603 2.636830 CAGCTTGTGAGACCCTATTGG 58.363 52.381 0.00 0.00 41.37 3.16
603 604 2.026822 ACCAGCTTGTGAGACCCTATTG 60.027 50.000 0.00 0.00 0.00 1.90
604 605 2.237392 GACCAGCTTGTGAGACCCTATT 59.763 50.000 0.00 0.00 0.00 1.73
605 606 1.834263 GACCAGCTTGTGAGACCCTAT 59.166 52.381 0.00 0.00 0.00 2.57
606 607 1.203187 AGACCAGCTTGTGAGACCCTA 60.203 52.381 0.00 0.00 0.00 3.53
607 608 0.472734 AGACCAGCTTGTGAGACCCT 60.473 55.000 0.00 0.00 0.00 4.34
608 609 1.267121 TAGACCAGCTTGTGAGACCC 58.733 55.000 0.00 0.00 0.00 4.46
609 610 2.497675 TCATAGACCAGCTTGTGAGACC 59.502 50.000 0.00 0.00 0.00 3.85
610 611 3.445450 TCTCATAGACCAGCTTGTGAGAC 59.555 47.826 8.12 0.00 39.84 3.36
611 612 3.445450 GTCTCATAGACCAGCTTGTGAGA 59.555 47.826 8.12 8.12 41.17 3.27
612 613 3.779759 GTCTCATAGACCAGCTTGTGAG 58.220 50.000 0.00 0.00 39.28 3.51
613 614 3.876274 GTCTCATAGACCAGCTTGTGA 57.124 47.619 0.00 0.00 39.28 3.58
630 631 4.569719 AAAATTGTATGAGACCGGGTCT 57.430 40.909 29.13 29.13 46.42 3.85
650 651 4.692228 ACGTACCAAGTCTTACGGAAAAA 58.308 39.130 10.32 0.00 44.30 1.94
651 652 4.320608 ACGTACCAAGTCTTACGGAAAA 57.679 40.909 10.32 0.00 44.30 2.29
652 653 4.759693 TCTACGTACCAAGTCTTACGGAAA 59.240 41.667 10.32 0.00 44.30 3.13
653 654 4.323417 TCTACGTACCAAGTCTTACGGAA 58.677 43.478 10.32 0.00 44.30 4.30
654 655 3.937814 TCTACGTACCAAGTCTTACGGA 58.062 45.455 10.32 1.99 44.30 4.69
655 656 4.497006 CCATCTACGTACCAAGTCTTACGG 60.497 50.000 10.32 0.17 44.30 4.02
656 657 4.333649 TCCATCTACGTACCAAGTCTTACG 59.666 45.833 5.10 5.10 45.27 3.18
663 664 3.550233 CCGTGATCCATCTACGTACCAAG 60.550 52.174 0.00 0.00 36.17 3.61
720 721 1.140589 CTCCTGGCTCTACACGCTG 59.859 63.158 0.00 0.00 0.00 5.18
761 762 1.456705 GAGCCCCCATCTCTCTCGT 60.457 63.158 0.00 0.00 0.00 4.18
762 763 1.456518 TGAGCCCCCATCTCTCTCG 60.457 63.158 0.00 0.00 0.00 4.04
763 764 1.120795 CCTGAGCCCCCATCTCTCTC 61.121 65.000 0.00 0.00 0.00 3.20
764 765 1.074623 CCTGAGCCCCCATCTCTCT 60.075 63.158 0.00 0.00 0.00 3.10
765 766 1.383803 ACCTGAGCCCCCATCTCTC 60.384 63.158 0.00 0.00 0.00 3.20
822 839 3.383825 TCCTCGCAAACCTTATCTCCTAC 59.616 47.826 0.00 0.00 0.00 3.18
823 840 3.637229 CTCCTCGCAAACCTTATCTCCTA 59.363 47.826 0.00 0.00 0.00 2.94
825 842 2.431057 TCTCCTCGCAAACCTTATCTCC 59.569 50.000 0.00 0.00 0.00 3.71
837 854 2.219458 CGTACCTTATCTCTCCTCGCA 58.781 52.381 0.00 0.00 0.00 5.10
846 863 1.948145 CTCACCTCGCGTACCTTATCT 59.052 52.381 5.77 0.00 0.00 1.98
847 864 1.599916 GCTCACCTCGCGTACCTTATC 60.600 57.143 5.77 0.00 0.00 1.75
854 871 2.265904 ACACTGCTCACCTCGCGTA 61.266 57.895 5.77 0.00 0.00 4.42
855 872 3.606662 ACACTGCTCACCTCGCGT 61.607 61.111 5.77 0.00 0.00 6.01
857 874 2.029666 ACACACTGCTCACCTCGC 59.970 61.111 0.00 0.00 0.00 5.03
881 898 1.403972 CTTCTTCGTACGACAGGCGC 61.404 60.000 19.36 0.00 46.04 6.53
896 913 1.261480 ATCTCTCACGTGTGGCTTCT 58.739 50.000 16.51 0.00 0.00 2.85
902 919 2.188524 CGATCCAATCTCTCACGTGTG 58.811 52.381 16.51 13.78 0.00 3.82
903 920 1.135139 CCGATCCAATCTCTCACGTGT 59.865 52.381 16.51 0.00 0.00 4.49
906 923 1.405463 TGACCGATCCAATCTCTCACG 59.595 52.381 0.00 0.00 0.00 4.35
929 946 1.803366 AACGACTGGACTCGGGTGAC 61.803 60.000 0.00 0.00 38.02 3.67
930 947 1.111116 AAACGACTGGACTCGGGTGA 61.111 55.000 0.00 0.00 38.02 4.02
943 960 6.127952 TGGGCATTTATTTACAGGTAAACGAC 60.128 38.462 6.76 0.00 37.80 4.34
951 968 5.458041 CAGGATGGGCATTTATTTACAGG 57.542 43.478 0.00 0.00 0.00 4.00
968 985 0.842635 GAGGCATTCAGACCCAGGAT 59.157 55.000 0.00 0.00 0.00 3.24
1015 1032 3.047718 CTGCTGCCATGGCGAACAG 62.048 63.158 30.87 29.40 45.51 3.16
1063 1083 2.496817 CTCCGCTCCTTCTTCCGG 59.503 66.667 0.00 0.00 41.97 5.14
1122 1148 4.792804 GGTCTCAGCCAGCAGCCC 62.793 72.222 0.00 0.00 45.47 5.19
1207 1236 1.672356 CGCACTTGGGGAAGGTGAG 60.672 63.158 0.00 0.00 33.32 3.51
1398 1427 2.284921 TGGGTGGAGAGGAGCCTG 60.285 66.667 0.00 0.00 31.85 4.85
1465 1494 0.536233 TTGCGGCACAGGTACACAAT 60.536 50.000 0.05 0.00 0.00 2.71
1506 1535 3.181493 CCTTGCTGATGAACTGCCATAAC 60.181 47.826 0.00 0.00 41.66 1.89
1596 1637 2.597455 CCAAGGTTGTGTTCCCAGATT 58.403 47.619 0.00 0.00 0.00 2.40
1703 1744 0.391661 GAGGAACTTGGCGAGCATCA 60.392 55.000 0.37 0.00 41.55 3.07
1947 1988 3.020274 TGATCCTCTCAGTTTCTCCTCG 58.980 50.000 0.00 0.00 0.00 4.63
1998 2040 2.543777 AACATACGTGTGGTGAAGCT 57.456 45.000 17.05 0.00 38.92 3.74
2003 2045 1.332065 TGCACAAACATACGTGTGGTG 59.668 47.619 17.05 14.88 44.32 4.17
2006 2048 2.223363 TGGTTGCACAAACATACGTGTG 60.223 45.455 11.09 11.09 46.40 3.82
2009 2051 3.784701 TTTGGTTGCACAAACATACGT 57.215 38.095 1.27 0.00 40.86 3.57
2082 2139 2.629617 CAAAAGGCAAGGGAGTCAATGT 59.370 45.455 0.00 0.00 0.00 2.71
2172 2229 9.260002 CTGTTTTGCCTGTTTAAGAAATAACAT 57.740 29.630 0.00 0.00 34.10 2.71
2190 2247 1.937899 ACAGACACGTACCTGTTTTGC 59.062 47.619 14.09 0.00 40.40 3.68
2191 2248 3.000925 GTCACAGACACGTACCTGTTTTG 59.999 47.826 16.42 8.49 41.26 2.44
2196 2253 1.607148 TCAGTCACAGACACGTACCTG 59.393 52.381 12.98 12.98 34.60 4.00
2205 2262 5.871524 TCAATAAAGCAGATCAGTCACAGAC 59.128 40.000 0.00 0.00 0.00 3.51
2209 2266 6.734104 AACTCAATAAAGCAGATCAGTCAC 57.266 37.500 0.00 0.00 0.00 3.67
2252 2895 7.013559 TCCTGGTCAATGCACAAATAATATCAG 59.986 37.037 0.00 0.00 0.00 2.90
2266 2909 2.738314 GCAACAAATTCCTGGTCAATGC 59.262 45.455 0.00 0.00 0.00 3.56
2267 2910 4.261578 AGCAACAAATTCCTGGTCAATG 57.738 40.909 0.00 0.00 0.00 2.82
2269 2912 6.183360 ACAAATAGCAACAAATTCCTGGTCAA 60.183 34.615 0.00 0.00 0.00 3.18
2293 2936 4.870991 GCTAGACATCTTTGGTACCTCAAC 59.129 45.833 14.36 0.00 0.00 3.18
2299 2942 3.795623 TCGGCTAGACATCTTTGGTAC 57.204 47.619 0.00 0.00 0.00 3.34
2379 3594 6.018433 AGCCAATAAACCAGGTCAATCTAT 57.982 37.500 0.00 0.00 0.00 1.98
2400 3615 7.650834 TTCAGCAAACAAATATTTGGTAAGC 57.349 32.000 27.43 26.05 45.90 3.09
2401 3616 8.223100 GCTTTCAGCAAACAAATATTTGGTAAG 58.777 33.333 27.43 20.86 45.90 2.34
2457 3672 0.995024 CAACCTTCCACCCTCCATCT 59.005 55.000 0.00 0.00 0.00 2.90
2459 3674 0.477597 TCCAACCTTCCACCCTCCAT 60.478 55.000 0.00 0.00 0.00 3.41
2601 4904 9.142014 TGTTAATTATACCTGAAAATGGGGATG 57.858 33.333 0.00 0.00 0.00 3.51
2705 5009 6.074623 TGCAAGTGTTGTAACAAAATATTGCG 60.075 34.615 16.28 0.00 41.21 4.85
2708 5012 9.323985 ACAATGCAAGTGTTGTAACAAAATATT 57.676 25.926 1.59 0.00 46.63 1.28
2713 5017 8.709386 ATTTACAATGCAAGTGTTGTAACAAA 57.291 26.923 18.38 9.99 46.63 2.83
2729 5033 7.596995 ACGTTTGGTTTGGTCATATTTACAATG 59.403 33.333 0.00 0.00 0.00 2.82
2733 5037 6.440436 ACACGTTTGGTTTGGTCATATTTAC 58.560 36.000 0.00 0.00 0.00 2.01
2786 5090 4.383850 AACTGCACAGCAACACATTAAA 57.616 36.364 0.00 0.00 38.41 1.52
2799 5103 9.803315 TTTTTACACAAAACATATAACTGCACA 57.197 25.926 0.00 0.00 33.39 4.57
2873 5180 7.723616 TCAGGACAAAAATATTGGTTCTCAAGA 59.276 33.333 0.00 0.00 38.95 3.02
2899 5206 8.422577 AGAAGAGGTTTTTGGTTTGCTATATT 57.577 30.769 0.00 0.00 0.00 1.28


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.