Multiple sequence alignment - TraesCS7B01G365300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G365300 chr7B 100.000 5719 0 0 1 5719 628737583 628731865 0.000000e+00 10562
1 TraesCS7B01G365300 chr7B 86.509 2839 204 90 994 3762 627611027 627613756 0.000000e+00 2955
2 TraesCS7B01G365300 chr7B 92.453 583 32 6 4169 4746 627613899 627614474 0.000000e+00 822
3 TraesCS7B01G365300 chr7B 80.385 571 48 27 307 824 627610226 627610785 5.410000e-100 375
4 TraesCS7B01G365300 chr7B 91.176 102 5 3 3889 3986 627613795 627613896 1.000000e-27 135
5 TraesCS7B01G365300 chr7D 90.953 4388 189 76 649 4945 571977627 571973357 0.000000e+00 5712
6 TraesCS7B01G365300 chr7D 87.075 1470 109 38 2205 3628 571480129 571481563 0.000000e+00 1587
7 TraesCS7B01G365300 chr7D 82.096 1994 140 110 303 2184 571478185 571480073 0.000000e+00 1504
8 TraesCS7B01G365300 chr7D 92.650 585 32 7 4169 4746 571481819 571482399 0.000000e+00 832
9 TraesCS7B01G365300 chr7D 87.597 387 24 15 268 642 571978274 571977900 1.470000e-115 427
10 TraesCS7B01G365300 chr7D 91.176 102 5 3 3889 3986 571481715 571481816 1.000000e-27 135
11 TraesCS7B01G365300 chr7A 90.342 3800 163 77 268 3986 661282008 661278332 0.000000e+00 4796
12 TraesCS7B01G365300 chr7A 85.524 2853 209 100 994 3762 660495298 660498030 0.000000e+00 2793
13 TraesCS7B01G365300 chr7A 94.479 797 37 7 3981 4775 661278307 661277516 0.000000e+00 1221
14 TraesCS7B01G365300 chr7A 88.806 938 62 19 4755 5669 661277505 661276588 0.000000e+00 1110
15 TraesCS7B01G365300 chr7A 91.267 584 41 6 4169 4746 660498174 660498753 0.000000e+00 787
16 TraesCS7B01G365300 chr7A 78.812 623 43 45 303 843 660494488 660495103 2.550000e-88 337
17 TraesCS7B01G365300 chr7A 91.089 101 5 3 3890 3986 660498071 660498171 3.590000e-27 134
18 TraesCS7B01G365300 chr2A 89.524 105 9 2 1004 1107 708058375 708058478 1.290000e-26 132


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G365300 chr7B 628731865 628737583 5718 True 10562.000000 10562 100.00000 1 5719 1 chr7B.!!$R1 5718
1 TraesCS7B01G365300 chr7B 627610226 627614474 4248 False 1071.750000 2955 87.63075 307 4746 4 chr7B.!!$F1 4439
2 TraesCS7B01G365300 chr7D 571973357 571978274 4917 True 3069.500000 5712 89.27500 268 4945 2 chr7D.!!$R1 4677
3 TraesCS7B01G365300 chr7D 571478185 571482399 4214 False 1014.500000 1587 88.24925 303 4746 4 chr7D.!!$F1 4443
4 TraesCS7B01G365300 chr7A 661276588 661282008 5420 True 2375.666667 4796 91.20900 268 5669 3 chr7A.!!$R1 5401
5 TraesCS7B01G365300 chr7A 660494488 660498753 4265 False 1012.750000 2793 86.67300 303 4746 4 chr7A.!!$F1 4443

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
234 235 0.028955 ACCCCTAAATCTCCCCCTCC 60.029 60.000 0.0 0.0 0.00 4.30 F
389 407 0.101040 CCGGAAGATACGTGCCGTTA 59.899 55.000 0.0 0.0 42.08 3.18 F
1921 2465 1.002624 GCATCCGTTTCCACTCCCA 60.003 57.895 0.0 0.0 0.00 4.37 F
2679 3310 0.250727 TCTCCTTTGCCTTGGTTCCG 60.251 55.000 0.0 0.0 0.00 4.30 F
4155 4899 2.064014 GCAAAAAGATTCTGCTGCCAC 58.936 47.619 0.0 0.0 33.20 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1921 2465 1.630369 TCACTTCAGTTATGGCTGGCT 59.370 47.619 2.00 0.0 37.12 4.75 R
2348 2976 0.180406 CTTCTGTTATGGGGACGGGG 59.820 60.000 0.00 0.0 0.00 5.73 R
3909 4606 0.036732 GGCATGAGAGTGACCCACAA 59.963 55.000 0.00 0.0 36.74 3.33 R
4264 5015 0.322975 CAAGACCCAGTCCTCCTGTG 59.677 60.000 0.00 0.0 39.74 3.66 R
5304 6106 0.038526 GTACACACAGCAGTACGCCT 60.039 55.000 6.15 0.0 44.04 5.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 42 9.937577 CTTAATTTTATTTAACAGTTCAAGCGC 57.062 29.630 0.00 0.00 0.00 5.92
42 43 7.938563 AATTTTATTTAACAGTTCAAGCGCA 57.061 28.000 11.47 0.00 0.00 6.09
43 44 6.741448 TTTTATTTAACAGTTCAAGCGCAC 57.259 33.333 11.47 0.00 0.00 5.34
44 45 5.682943 TTATTTAACAGTTCAAGCGCACT 57.317 34.783 11.47 0.00 0.00 4.40
45 46 3.602390 TTTAACAGTTCAAGCGCACTC 57.398 42.857 11.47 0.00 0.00 3.51
46 47 2.526304 TAACAGTTCAAGCGCACTCT 57.474 45.000 11.47 0.00 0.00 3.24
47 48 2.526304 AACAGTTCAAGCGCACTCTA 57.474 45.000 11.47 0.00 0.00 2.43
48 49 1.784525 ACAGTTCAAGCGCACTCTAC 58.215 50.000 11.47 0.36 0.00 2.59
49 50 1.341531 ACAGTTCAAGCGCACTCTACT 59.658 47.619 11.47 3.05 0.00 2.57
50 51 2.557056 ACAGTTCAAGCGCACTCTACTA 59.443 45.455 11.47 0.00 0.00 1.82
51 52 3.005472 ACAGTTCAAGCGCACTCTACTAA 59.995 43.478 11.47 0.00 0.00 2.24
52 53 3.987868 CAGTTCAAGCGCACTCTACTAAA 59.012 43.478 11.47 0.00 0.00 1.85
53 54 4.090642 CAGTTCAAGCGCACTCTACTAAAG 59.909 45.833 11.47 0.00 0.00 1.85
54 55 3.936372 TCAAGCGCACTCTACTAAAGT 57.064 42.857 11.47 0.00 0.00 2.66
55 56 5.048224 AGTTCAAGCGCACTCTACTAAAGTA 60.048 40.000 11.47 0.00 0.00 2.24
57 58 4.458295 TCAAGCGCACTCTACTAAAGTAGT 59.542 41.667 11.47 2.14 46.08 2.73
58 59 4.358494 AGCGCACTCTACTAAAGTAGTG 57.642 45.455 11.47 14.81 46.08 2.74
59 60 2.853003 GCGCACTCTACTAAAGTAGTGC 59.147 50.000 20.65 20.65 46.08 4.40
60 61 3.672511 GCGCACTCTACTAAAGTAGTGCA 60.673 47.826 26.02 7.50 45.31 4.57
61 62 4.673441 CGCACTCTACTAAAGTAGTGCAT 58.327 43.478 26.02 7.35 45.31 3.96
62 63 4.500837 CGCACTCTACTAAAGTAGTGCATG 59.499 45.833 26.02 16.19 45.31 4.06
63 64 5.651530 GCACTCTACTAAAGTAGTGCATGA 58.348 41.667 23.63 4.48 44.85 3.07
64 65 6.276847 GCACTCTACTAAAGTAGTGCATGAT 58.723 40.000 23.63 4.23 44.85 2.45
65 66 6.758886 GCACTCTACTAAAGTAGTGCATGATT 59.241 38.462 23.63 3.69 44.85 2.57
66 67 7.254252 GCACTCTACTAAAGTAGTGCATGATTG 60.254 40.741 23.63 13.19 44.85 2.67
67 68 7.223582 CACTCTACTAAAGTAGTGCATGATTGG 59.776 40.741 15.06 0.00 46.08 3.16
68 69 7.093289 ACTCTACTAAAGTAGTGCATGATTGGT 60.093 37.037 15.06 0.00 46.08 3.67
69 70 7.620880 TCTACTAAAGTAGTGCATGATTGGTT 58.379 34.615 15.06 0.00 46.08 3.67
70 71 6.500684 ACTAAAGTAGTGCATGATTGGTTG 57.499 37.500 0.00 0.00 37.69 3.77
71 72 6.003950 ACTAAAGTAGTGCATGATTGGTTGT 58.996 36.000 0.00 0.00 37.69 3.32
72 73 5.789643 AAAGTAGTGCATGATTGGTTGTT 57.210 34.783 0.00 0.00 0.00 2.83
73 74 6.892658 AAAGTAGTGCATGATTGGTTGTTA 57.107 33.333 0.00 0.00 0.00 2.41
74 75 6.500684 AAGTAGTGCATGATTGGTTGTTAG 57.499 37.500 0.00 0.00 0.00 2.34
75 76 5.560724 AGTAGTGCATGATTGGTTGTTAGT 58.439 37.500 0.00 0.00 0.00 2.24
76 77 6.003950 AGTAGTGCATGATTGGTTGTTAGTT 58.996 36.000 0.00 0.00 0.00 2.24
77 78 5.789643 AGTGCATGATTGGTTGTTAGTTT 57.210 34.783 0.00 0.00 0.00 2.66
78 79 6.160576 AGTGCATGATTGGTTGTTAGTTTT 57.839 33.333 0.00 0.00 0.00 2.43
79 80 6.581712 AGTGCATGATTGGTTGTTAGTTTTT 58.418 32.000 0.00 0.00 0.00 1.94
108 109 6.530019 ACAGTACATACACAGATGATCACA 57.470 37.500 0.00 0.00 0.00 3.58
109 110 7.117285 ACAGTACATACACAGATGATCACAT 57.883 36.000 0.00 0.00 39.67 3.21
110 111 8.237811 ACAGTACATACACAGATGATCACATA 57.762 34.615 0.00 0.00 36.82 2.29
111 112 8.355913 ACAGTACATACACAGATGATCACATAG 58.644 37.037 0.00 0.00 36.82 2.23
112 113 8.355913 CAGTACATACACAGATGATCACATAGT 58.644 37.037 0.00 0.00 36.82 2.12
113 114 9.574516 AGTACATACACAGATGATCACATAGTA 57.425 33.333 0.00 0.00 36.82 1.82
114 115 9.833182 GTACATACACAGATGATCACATAGTAG 57.167 37.037 0.00 0.00 36.82 2.57
115 116 7.890515 ACATACACAGATGATCACATAGTAGG 58.109 38.462 0.00 2.67 36.82 3.18
116 117 7.725844 ACATACACAGATGATCACATAGTAGGA 59.274 37.037 0.00 0.00 36.82 2.94
117 118 6.398234 ACACAGATGATCACATAGTAGGAC 57.602 41.667 0.00 0.00 36.82 3.85
118 119 6.132658 ACACAGATGATCACATAGTAGGACT 58.867 40.000 0.00 0.00 36.82 3.85
119 120 6.609212 ACACAGATGATCACATAGTAGGACTT 59.391 38.462 0.00 0.00 36.82 3.01
120 121 6.922407 CACAGATGATCACATAGTAGGACTTG 59.078 42.308 0.00 0.00 36.82 3.16
121 122 6.836007 ACAGATGATCACATAGTAGGACTTGA 59.164 38.462 0.00 0.00 36.82 3.02
122 123 7.343057 ACAGATGATCACATAGTAGGACTTGAA 59.657 37.037 0.00 0.00 36.82 2.69
123 124 8.366401 CAGATGATCACATAGTAGGACTTGAAT 58.634 37.037 0.00 0.00 36.82 2.57
124 125 8.584157 AGATGATCACATAGTAGGACTTGAATC 58.416 37.037 0.00 0.00 36.82 2.52
125 126 7.055667 TGATCACATAGTAGGACTTGAATCC 57.944 40.000 0.00 0.00 39.28 3.01
126 127 7.512058 ATGATCACATAGTAGGACTTGAATCCT 59.488 37.037 0.00 0.00 42.42 3.24
135 136 4.302559 GGACTTGAATCCTGGTAGGTTT 57.697 45.455 0.00 0.00 36.53 3.27
136 137 4.010349 GGACTTGAATCCTGGTAGGTTTG 58.990 47.826 0.00 0.00 36.53 2.93
137 138 4.010349 GACTTGAATCCTGGTAGGTTTGG 58.990 47.826 0.00 0.00 36.53 3.28
138 139 3.397955 ACTTGAATCCTGGTAGGTTTGGT 59.602 43.478 0.00 0.00 36.53 3.67
139 140 4.141018 ACTTGAATCCTGGTAGGTTTGGTT 60.141 41.667 0.00 0.00 36.53 3.67
140 141 4.028993 TGAATCCTGGTAGGTTTGGTTC 57.971 45.455 0.00 0.00 36.53 3.62
141 142 3.245122 TGAATCCTGGTAGGTTTGGTTCC 60.245 47.826 0.00 0.00 36.53 3.62
142 143 1.822425 TCCTGGTAGGTTTGGTTCCA 58.178 50.000 0.00 0.00 36.53 3.53
143 144 1.422402 TCCTGGTAGGTTTGGTTCCAC 59.578 52.381 0.00 0.00 36.53 4.02
144 145 1.546998 CCTGGTAGGTTTGGTTCCACC 60.547 57.143 0.00 0.00 39.22 4.61
154 155 2.239681 TGGTTCCACCACAAAAACCT 57.760 45.000 4.90 0.00 44.79 3.50
155 156 3.383698 TGGTTCCACCACAAAAACCTA 57.616 42.857 4.90 0.00 44.79 3.08
156 157 3.709587 TGGTTCCACCACAAAAACCTAA 58.290 40.909 4.90 0.00 44.79 2.69
157 158 3.447944 TGGTTCCACCACAAAAACCTAAC 59.552 43.478 4.90 0.00 44.79 2.34
158 159 3.181473 GGTTCCACCACAAAAACCTAACC 60.181 47.826 0.00 0.00 38.42 2.85
159 160 2.299521 TCCACCACAAAAACCTAACCG 58.700 47.619 0.00 0.00 0.00 4.44
160 161 2.025898 CCACCACAAAAACCTAACCGT 58.974 47.619 0.00 0.00 0.00 4.83
161 162 2.033675 CCACCACAAAAACCTAACCGTC 59.966 50.000 0.00 0.00 0.00 4.79
162 163 2.946990 CACCACAAAAACCTAACCGTCT 59.053 45.455 0.00 0.00 0.00 4.18
163 164 3.002965 CACCACAAAAACCTAACCGTCTC 59.997 47.826 0.00 0.00 0.00 3.36
164 165 2.222445 CCACAAAAACCTAACCGTCTCG 59.778 50.000 0.00 0.00 0.00 4.04
165 166 3.125316 CACAAAAACCTAACCGTCTCGA 58.875 45.455 0.00 0.00 0.00 4.04
166 167 3.744426 CACAAAAACCTAACCGTCTCGAT 59.256 43.478 0.00 0.00 0.00 3.59
167 168 4.925054 CACAAAAACCTAACCGTCTCGATA 59.075 41.667 0.00 0.00 0.00 2.92
168 169 5.061808 CACAAAAACCTAACCGTCTCGATAG 59.938 44.000 0.00 0.00 0.00 2.08
169 170 4.382345 AAAACCTAACCGTCTCGATAGG 57.618 45.455 6.06 6.06 39.92 2.57
170 171 2.725221 ACCTAACCGTCTCGATAGGT 57.275 50.000 7.24 7.24 41.18 3.08
171 172 3.359950 AACCTAACCGTCTCGATAGGTT 58.640 45.455 16.60 16.60 45.25 3.50
172 173 2.686915 ACCTAACCGTCTCGATAGGTTG 59.313 50.000 21.91 12.87 46.54 3.77
173 174 2.686915 CCTAACCGTCTCGATAGGTTGT 59.313 50.000 21.91 6.57 46.54 3.32
174 175 2.649331 AACCGTCTCGATAGGTTGTG 57.351 50.000 15.56 0.00 45.53 3.33
175 176 1.542492 ACCGTCTCGATAGGTTGTGT 58.458 50.000 1.35 0.00 33.96 3.72
176 177 1.891150 ACCGTCTCGATAGGTTGTGTT 59.109 47.619 1.35 0.00 33.96 3.32
177 178 3.084039 ACCGTCTCGATAGGTTGTGTTA 58.916 45.455 1.35 0.00 33.96 2.41
178 179 3.128242 ACCGTCTCGATAGGTTGTGTTAG 59.872 47.826 1.35 0.00 33.96 2.34
179 180 3.128242 CCGTCTCGATAGGTTGTGTTAGT 59.872 47.826 0.00 0.00 0.00 2.24
180 181 4.380233 CCGTCTCGATAGGTTGTGTTAGTT 60.380 45.833 0.00 0.00 0.00 2.24
181 182 4.557690 CGTCTCGATAGGTTGTGTTAGTTG 59.442 45.833 0.00 0.00 0.00 3.16
182 183 5.467705 GTCTCGATAGGTTGTGTTAGTTGT 58.532 41.667 0.00 0.00 0.00 3.32
183 184 5.924825 GTCTCGATAGGTTGTGTTAGTTGTT 59.075 40.000 0.00 0.00 0.00 2.83
184 185 5.924254 TCTCGATAGGTTGTGTTAGTTGTTG 59.076 40.000 0.00 0.00 0.00 3.33
185 186 5.845103 TCGATAGGTTGTGTTAGTTGTTGA 58.155 37.500 0.00 0.00 0.00 3.18
186 187 5.693104 TCGATAGGTTGTGTTAGTTGTTGAC 59.307 40.000 0.00 0.00 0.00 3.18
187 188 5.464057 CGATAGGTTGTGTTAGTTGTTGACA 59.536 40.000 0.00 0.00 0.00 3.58
188 189 6.018588 CGATAGGTTGTGTTAGTTGTTGACAA 60.019 38.462 0.00 0.00 0.00 3.18
189 190 5.560966 AGGTTGTGTTAGTTGTTGACAAG 57.439 39.130 0.00 0.00 36.39 3.16
190 191 5.250200 AGGTTGTGTTAGTTGTTGACAAGA 58.750 37.500 0.00 0.00 36.39 3.02
191 192 5.708230 AGGTTGTGTTAGTTGTTGACAAGAA 59.292 36.000 0.00 0.00 36.39 2.52
192 193 5.798434 GGTTGTGTTAGTTGTTGACAAGAAC 59.202 40.000 18.00 18.00 36.39 3.01
193 194 5.554822 TGTGTTAGTTGTTGACAAGAACC 57.445 39.130 21.02 9.49 35.43 3.62
194 195 5.004448 TGTGTTAGTTGTTGACAAGAACCA 58.996 37.500 21.02 11.62 35.43 3.67
195 196 5.650266 TGTGTTAGTTGTTGACAAGAACCAT 59.350 36.000 21.02 9.25 35.43 3.55
196 197 6.183360 TGTGTTAGTTGTTGACAAGAACCATC 60.183 38.462 21.02 13.18 35.43 3.51
197 198 5.883115 TGTTAGTTGTTGACAAGAACCATCA 59.117 36.000 21.02 15.08 35.43 3.07
198 199 6.038161 TGTTAGTTGTTGACAAGAACCATCAG 59.962 38.462 21.02 0.00 35.43 2.90
199 200 4.780815 AGTTGTTGACAAGAACCATCAGA 58.219 39.130 21.02 0.00 35.43 3.27
200 201 4.818546 AGTTGTTGACAAGAACCATCAGAG 59.181 41.667 21.02 0.00 35.43 3.35
201 202 4.687901 TGTTGACAAGAACCATCAGAGA 57.312 40.909 0.00 0.00 0.00 3.10
202 203 5.233083 TGTTGACAAGAACCATCAGAGAT 57.767 39.130 0.00 0.00 0.00 2.75
203 204 4.999311 TGTTGACAAGAACCATCAGAGATG 59.001 41.667 0.07 0.07 0.00 2.90
204 205 3.603532 TGACAAGAACCATCAGAGATGC 58.396 45.455 1.52 0.00 0.00 3.91
205 206 3.262660 TGACAAGAACCATCAGAGATGCT 59.737 43.478 1.52 0.00 0.00 3.79
206 207 3.607741 ACAAGAACCATCAGAGATGCTG 58.392 45.455 1.52 0.00 46.31 4.41
207 208 3.008813 ACAAGAACCATCAGAGATGCTGT 59.991 43.478 1.52 0.00 45.14 4.40
208 209 4.223700 ACAAGAACCATCAGAGATGCTGTA 59.776 41.667 1.52 0.00 45.14 2.74
209 210 5.181009 CAAGAACCATCAGAGATGCTGTAA 58.819 41.667 1.52 0.00 45.14 2.41
210 211 5.426689 AGAACCATCAGAGATGCTGTAAA 57.573 39.130 1.52 0.00 45.14 2.01
211 212 5.181748 AGAACCATCAGAGATGCTGTAAAC 58.818 41.667 1.52 0.00 45.14 2.01
212 213 3.878778 ACCATCAGAGATGCTGTAAACC 58.121 45.455 1.52 0.00 45.14 3.27
213 214 3.264193 ACCATCAGAGATGCTGTAAACCA 59.736 43.478 1.52 0.00 45.14 3.67
214 215 4.263462 ACCATCAGAGATGCTGTAAACCAA 60.263 41.667 1.52 0.00 45.14 3.67
215 216 4.701651 CCATCAGAGATGCTGTAAACCAAA 59.298 41.667 1.52 0.00 45.14 3.28
216 217 5.392380 CCATCAGAGATGCTGTAAACCAAAC 60.392 44.000 1.52 0.00 45.14 2.93
217 218 4.072131 TCAGAGATGCTGTAAACCAAACC 58.928 43.478 0.00 0.00 45.14 3.27
218 219 3.191371 CAGAGATGCTGTAAACCAAACCC 59.809 47.826 0.00 0.00 39.85 4.11
219 220 2.492088 GAGATGCTGTAAACCAAACCCC 59.508 50.000 0.00 0.00 0.00 4.95
220 221 2.110011 AGATGCTGTAAACCAAACCCCT 59.890 45.455 0.00 0.00 0.00 4.79
221 222 3.332485 AGATGCTGTAAACCAAACCCCTA 59.668 43.478 0.00 0.00 0.00 3.53
222 223 3.596940 TGCTGTAAACCAAACCCCTAA 57.403 42.857 0.00 0.00 0.00 2.69
223 224 3.912248 TGCTGTAAACCAAACCCCTAAA 58.088 40.909 0.00 0.00 0.00 1.85
224 225 4.484912 TGCTGTAAACCAAACCCCTAAAT 58.515 39.130 0.00 0.00 0.00 1.40
225 226 4.525100 TGCTGTAAACCAAACCCCTAAATC 59.475 41.667 0.00 0.00 0.00 2.17
226 227 4.770531 GCTGTAAACCAAACCCCTAAATCT 59.229 41.667 0.00 0.00 0.00 2.40
227 228 5.105877 GCTGTAAACCAAACCCCTAAATCTC 60.106 44.000 0.00 0.00 0.00 2.75
228 229 5.326900 TGTAAACCAAACCCCTAAATCTCC 58.673 41.667 0.00 0.00 0.00 3.71
229 230 3.468071 AACCAAACCCCTAAATCTCCC 57.532 47.619 0.00 0.00 0.00 4.30
230 231 1.644337 ACCAAACCCCTAAATCTCCCC 59.356 52.381 0.00 0.00 0.00 4.81
231 232 1.063190 CCAAACCCCTAAATCTCCCCC 60.063 57.143 0.00 0.00 0.00 5.40
232 233 1.930204 CAAACCCCTAAATCTCCCCCT 59.070 52.381 0.00 0.00 0.00 4.79
233 234 1.908643 AACCCCTAAATCTCCCCCTC 58.091 55.000 0.00 0.00 0.00 4.30
234 235 0.028955 ACCCCTAAATCTCCCCCTCC 60.029 60.000 0.00 0.00 0.00 4.30
235 236 1.128188 CCCCTAAATCTCCCCCTCCG 61.128 65.000 0.00 0.00 0.00 4.63
236 237 0.400093 CCCTAAATCTCCCCCTCCGT 60.400 60.000 0.00 0.00 0.00 4.69
237 238 0.759346 CCTAAATCTCCCCCTCCGTG 59.241 60.000 0.00 0.00 0.00 4.94
238 239 1.497161 CTAAATCTCCCCCTCCGTGT 58.503 55.000 0.00 0.00 0.00 4.49
239 240 1.413077 CTAAATCTCCCCCTCCGTGTC 59.587 57.143 0.00 0.00 0.00 3.67
240 241 0.252742 AAATCTCCCCCTCCGTGTCT 60.253 55.000 0.00 0.00 0.00 3.41
241 242 0.688087 AATCTCCCCCTCCGTGTCTC 60.688 60.000 0.00 0.00 0.00 3.36
242 243 1.585651 ATCTCCCCCTCCGTGTCTCT 61.586 60.000 0.00 0.00 0.00 3.10
243 244 2.037367 TCCCCCTCCGTGTCTCTG 59.963 66.667 0.00 0.00 0.00 3.35
244 245 2.283966 CCCCCTCCGTGTCTCTGT 60.284 66.667 0.00 0.00 0.00 3.41
245 246 2.352032 CCCCCTCCGTGTCTCTGTC 61.352 68.421 0.00 0.00 0.00 3.51
246 247 1.304547 CCCCTCCGTGTCTCTGTCT 60.305 63.158 0.00 0.00 0.00 3.41
247 248 0.900647 CCCCTCCGTGTCTCTGTCTT 60.901 60.000 0.00 0.00 0.00 3.01
248 249 0.969894 CCCTCCGTGTCTCTGTCTTT 59.030 55.000 0.00 0.00 0.00 2.52
249 250 1.067495 CCCTCCGTGTCTCTGTCTTTC 60.067 57.143 0.00 0.00 0.00 2.62
250 251 1.889829 CCTCCGTGTCTCTGTCTTTCT 59.110 52.381 0.00 0.00 0.00 2.52
251 252 2.352225 CCTCCGTGTCTCTGTCTTTCTG 60.352 54.545 0.00 0.00 0.00 3.02
252 253 2.294791 CTCCGTGTCTCTGTCTTTCTGT 59.705 50.000 0.00 0.00 0.00 3.41
253 254 2.034685 TCCGTGTCTCTGTCTTTCTGTG 59.965 50.000 0.00 0.00 0.00 3.66
254 255 2.223829 CCGTGTCTCTGTCTTTCTGTGT 60.224 50.000 0.00 0.00 0.00 3.72
255 256 2.791560 CGTGTCTCTGTCTTTCTGTGTG 59.208 50.000 0.00 0.00 0.00 3.82
256 257 2.541762 GTGTCTCTGTCTTTCTGTGTGC 59.458 50.000 0.00 0.00 0.00 4.57
257 258 2.168313 TGTCTCTGTCTTTCTGTGTGCA 59.832 45.455 0.00 0.00 0.00 4.57
258 259 2.541762 GTCTCTGTCTTTCTGTGTGCAC 59.458 50.000 10.75 10.75 0.00 4.57
259 260 2.168313 TCTCTGTCTTTCTGTGTGCACA 59.832 45.455 17.42 17.42 39.32 4.57
260 261 3.136763 CTCTGTCTTTCTGTGTGCACAT 58.863 45.455 24.69 0.00 41.01 3.21
261 262 2.874086 TCTGTCTTTCTGTGTGCACATG 59.126 45.455 24.69 18.52 41.01 3.21
262 263 2.615447 CTGTCTTTCTGTGTGCACATGT 59.385 45.455 24.69 0.00 41.01 3.21
263 264 2.355444 TGTCTTTCTGTGTGCACATGTG 59.645 45.455 24.69 21.83 41.01 3.21
264 265 2.613595 GTCTTTCTGTGTGCACATGTGA 59.386 45.455 29.80 17.66 41.01 3.58
265 266 3.251729 GTCTTTCTGTGTGCACATGTGAT 59.748 43.478 29.80 0.00 41.01 3.06
266 267 3.499537 TCTTTCTGTGTGCACATGTGATC 59.500 43.478 29.80 19.55 41.01 2.92
287 288 0.609131 GTGCACAACAGCCCATACCT 60.609 55.000 13.17 0.00 0.00 3.08
289 290 0.609131 GCACAACAGCCCATACCTGT 60.609 55.000 0.00 0.00 44.92 4.00
290 291 1.167851 CACAACAGCCCATACCTGTG 58.832 55.000 0.00 0.00 42.37 3.66
301 302 2.494471 CCATACCTGTGTACCAACTCGA 59.506 50.000 0.00 0.00 0.00 4.04
304 305 1.340248 ACCTGTGTACCAACTCGACTG 59.660 52.381 0.00 0.00 0.00 3.51
386 404 2.960129 GCCGGAAGATACGTGCCG 60.960 66.667 5.05 3.46 43.20 5.69
387 405 2.493030 CCGGAAGATACGTGCCGT 59.507 61.111 0.00 5.58 42.08 5.68
388 406 1.153706 CCGGAAGATACGTGCCGTT 60.154 57.895 0.00 0.00 42.08 4.44
389 407 0.101040 CCGGAAGATACGTGCCGTTA 59.899 55.000 0.00 0.00 42.08 3.18
390 408 1.474017 CGGAAGATACGTGCCGTTAG 58.526 55.000 0.00 0.00 41.54 2.34
424 446 2.004017 TCCGCGCTTCGAATTAAATGT 58.996 42.857 5.56 0.00 41.67 2.71
430 452 2.849502 GCTTCGAATTAAATGTCCCGCG 60.850 50.000 0.00 0.00 0.00 6.46
910 1327 2.359169 GGTCCCACTGCCGAGATCA 61.359 63.158 0.00 0.00 0.00 2.92
938 1376 4.803426 CAGCCGTCGGTCCTCTGC 62.803 72.222 13.94 0.00 0.00 4.26
1176 1644 2.673833 GACGTCGACCTCAACAAGATT 58.326 47.619 10.58 0.00 0.00 2.40
1224 1696 8.471302 AGACCTAATCCAGATACTCCTATAGT 57.529 38.462 0.00 0.00 42.62 2.12
1225 1697 8.554011 AGACCTAATCCAGATACTCCTATAGTC 58.446 40.741 0.00 0.00 39.80 2.59
1226 1698 7.645002 ACCTAATCCAGATACTCCTATAGTCC 58.355 42.308 0.00 0.00 39.80 3.85
1227 1699 7.466213 ACCTAATCCAGATACTCCTATAGTCCT 59.534 40.741 0.00 0.00 39.80 3.85
1228 1700 9.005318 CCTAATCCAGATACTCCTATAGTCCTA 57.995 40.741 0.00 0.00 39.80 2.94
1298 1789 7.624360 TGTTTGTGTGATCAGTTCTAGTTTT 57.376 32.000 0.00 0.00 0.00 2.43
1314 1805 3.703420 AGTTTTATCGTCTTCCGGATCG 58.297 45.455 4.15 11.41 37.11 3.69
1315 1806 3.379372 AGTTTTATCGTCTTCCGGATCGA 59.621 43.478 22.26 22.26 37.11 3.59
1322 1816 2.033049 CGTCTTCCGGATCGAACATACT 59.967 50.000 4.15 0.00 0.00 2.12
1330 1824 4.048504 CGGATCGAACATACTTATGCACA 58.951 43.478 0.00 0.00 37.19 4.57
1331 1825 4.686091 CGGATCGAACATACTTATGCACAT 59.314 41.667 0.00 0.00 37.19 3.21
1332 1826 5.861787 CGGATCGAACATACTTATGCACATA 59.138 40.000 0.00 0.00 37.19 2.29
1333 1827 6.531594 CGGATCGAACATACTTATGCACATAT 59.468 38.462 0.00 0.00 37.19 1.78
1334 1828 7.463251 CGGATCGAACATACTTATGCACATATG 60.463 40.741 0.00 0.00 37.19 1.78
1335 1829 7.201556 GGATCGAACATACTTATGCACATATGG 60.202 40.741 7.80 0.00 37.19 2.74
1336 1830 6.521162 TCGAACATACTTATGCACATATGGT 58.479 36.000 7.80 6.11 37.19 3.55
1337 1831 6.989759 TCGAACATACTTATGCACATATGGTT 59.010 34.615 7.80 0.00 37.19 3.67
1389 1886 6.374333 TCAGTTGATTTAATTTCTTCTCCCGG 59.626 38.462 0.00 0.00 0.00 5.73
1390 1887 5.125578 AGTTGATTTAATTTCTTCTCCCGGC 59.874 40.000 0.00 0.00 0.00 6.13
1468 1968 4.069304 TCCCCTTAAAAATATCGCATCCG 58.931 43.478 0.00 0.00 0.00 4.18
1559 2065 3.070302 ACAGACAAGTCTTCAGTTCTCCC 59.930 47.826 0.00 0.00 37.98 4.30
1565 2071 4.067944 AGTCTTCAGTTCTCCCCTGTAT 57.932 45.455 0.00 0.00 0.00 2.29
1580 2086 9.862149 TCTCCCCTGTATTAATTAAATTCCTTC 57.138 33.333 1.21 0.00 0.00 3.46
1689 2203 6.035650 GGTTCTCAATCATGCATCAAAATGTG 59.964 38.462 0.00 0.00 35.18 3.21
1784 2300 5.068198 TCAGCCATCTCCATTAATTTTCAGC 59.932 40.000 0.00 0.00 0.00 4.26
1795 2326 8.257306 TCCATTAATTTTCAGCCTGTTAATTCC 58.743 33.333 9.08 0.00 0.00 3.01
1796 2327 8.040132 CCATTAATTTTCAGCCTGTTAATTCCA 58.960 33.333 9.08 1.70 0.00 3.53
1797 2328 9.603921 CATTAATTTTCAGCCTGTTAATTCCAT 57.396 29.630 9.08 3.35 0.00 3.41
1798 2329 9.603921 ATTAATTTTCAGCCTGTTAATTCCATG 57.396 29.630 9.08 0.00 0.00 3.66
1799 2330 6.855763 ATTTTCAGCCTGTTAATTCCATGA 57.144 33.333 0.00 0.00 0.00 3.07
1921 2465 1.002624 GCATCCGTTTCCACTCCCA 60.003 57.895 0.00 0.00 0.00 4.37
1922 2466 1.026718 GCATCCGTTTCCACTCCCAG 61.027 60.000 0.00 0.00 0.00 4.45
1923 2467 1.026718 CATCCGTTTCCACTCCCAGC 61.027 60.000 0.00 0.00 0.00 4.85
1924 2468 2.198304 ATCCGTTTCCACTCCCAGCC 62.198 60.000 0.00 0.00 0.00 4.85
1972 2519 3.778618 TCTCGATCTCATCAAGTTGCAG 58.221 45.455 0.00 0.00 0.00 4.41
2040 2593 8.783660 ACCTTTCCTCCTTTTCTTTTCTTTAT 57.216 30.769 0.00 0.00 0.00 1.40
2041 2594 9.213777 ACCTTTCCTCCTTTTCTTTTCTTTATT 57.786 29.630 0.00 0.00 0.00 1.40
2125 2695 9.511144 GTCCTAATTTGTTTAATTACCATTCGG 57.489 33.333 0.00 0.00 37.60 4.30
2185 2761 6.981559 GTGAGATCATCTCCAAAGTAACTACC 59.018 42.308 12.37 0.00 42.73 3.18
2194 2770 6.552350 TCTCCAAAGTAACTACCACTACTGTT 59.448 38.462 0.00 0.00 0.00 3.16
2195 2771 6.518493 TCCAAAGTAACTACCACTACTGTTG 58.482 40.000 0.00 0.00 0.00 3.33
2196 2772 6.098695 TCCAAAGTAACTACCACTACTGTTGT 59.901 38.462 0.00 0.00 0.00 3.32
2197 2773 7.287466 TCCAAAGTAACTACCACTACTGTTGTA 59.713 37.037 0.00 0.00 0.00 2.41
2244 2866 7.669722 TGCACAGTAATTTTTCCCTCTTATTCT 59.330 33.333 0.00 0.00 0.00 2.40
2245 2867 7.970614 GCACAGTAATTTTTCCCTCTTATTCTG 59.029 37.037 0.00 0.00 0.00 3.02
2256 2878 3.072184 CCTCTTATTCTGGACATGGGAGG 59.928 52.174 0.00 0.00 33.15 4.30
2348 2976 2.416893 GTCTCCATCTTTTGTCGCCTTC 59.583 50.000 0.00 0.00 0.00 3.46
2679 3310 0.250727 TCTCCTTTGCCTTGGTTCCG 60.251 55.000 0.00 0.00 0.00 4.30
2763 3395 5.945191 TGATTGAATGTGGCTCTGATGTTAA 59.055 36.000 0.00 0.00 0.00 2.01
2796 3432 8.773404 TCTTAAAAATGGAGAAGTGTACTAGC 57.227 34.615 0.00 0.00 0.00 3.42
2797 3433 7.822822 TCTTAAAAATGGAGAAGTGTACTAGCC 59.177 37.037 0.00 0.00 0.00 3.93
2799 3435 4.744795 AATGGAGAAGTGTACTAGCCAG 57.255 45.455 0.00 0.00 0.00 4.85
2801 3437 3.090037 TGGAGAAGTGTACTAGCCAGAC 58.910 50.000 0.00 0.00 0.00 3.51
2802 3438 3.090037 GGAGAAGTGTACTAGCCAGACA 58.910 50.000 0.00 0.00 0.00 3.41
2803 3439 3.510360 GGAGAAGTGTACTAGCCAGACAA 59.490 47.826 0.00 0.00 0.00 3.18
2823 3481 6.604396 AGACAACATTAGATTCATGGATGCAA 59.396 34.615 0.00 0.00 0.00 4.08
2844 3502 3.904136 ATCTTGAGCACGTTCCAAAAG 57.096 42.857 0.00 0.00 0.00 2.27
2845 3503 2.912771 TCTTGAGCACGTTCCAAAAGA 58.087 42.857 0.00 0.00 0.00 2.52
2846 3504 3.476552 TCTTGAGCACGTTCCAAAAGAT 58.523 40.909 0.00 0.00 0.00 2.40
2848 3506 5.060506 TCTTGAGCACGTTCCAAAAGATTA 58.939 37.500 0.00 0.00 0.00 1.75
2849 3507 5.705441 TCTTGAGCACGTTCCAAAAGATTAT 59.295 36.000 0.00 0.00 0.00 1.28
2851 3509 7.389330 TCTTGAGCACGTTCCAAAAGATTATTA 59.611 33.333 0.00 0.00 0.00 0.98
2852 3510 6.837992 TGAGCACGTTCCAAAAGATTATTAC 58.162 36.000 0.00 0.00 0.00 1.89
2908 3571 9.050601 CAAAATTGTTTGTTAATTTGCTCCCTA 57.949 29.630 0.00 0.00 39.49 3.53
2911 3574 8.776376 ATTGTTTGTTAATTTGCTCCCTAATG 57.224 30.769 0.00 0.00 0.00 1.90
3110 3773 5.491982 CTGGTGTTTTATGAAGGTAGAGCT 58.508 41.667 0.00 0.00 0.00 4.09
3128 3791 2.188817 GCTCCTAAGGGGAAGAAGACA 58.811 52.381 0.00 0.00 44.58 3.41
3260 3925 6.726764 ACTACTTGATACTCCACTCTTTTCCT 59.273 38.462 0.00 0.00 0.00 3.36
3281 3946 7.466746 TCCTCTTTTGTTCCTTATTTGATGG 57.533 36.000 0.00 0.00 0.00 3.51
3321 3993 9.096160 CATCATATGGATAGATAGTGCAAGAAC 57.904 37.037 2.13 0.00 33.95 3.01
3452 4126 5.918426 TGACATGTGGTGCATTTTATGAT 57.082 34.783 1.15 0.00 35.19 2.45
3461 4135 6.863126 GTGGTGCATTTTATGATAAGTATGGC 59.137 38.462 0.00 0.00 0.00 4.40
3649 4341 3.003480 AGAGTAGAATTGAAGCGCCAAC 58.997 45.455 2.29 0.00 0.00 3.77
3681 4373 3.885297 AGGTCACCAAGTTGACATCTTTG 59.115 43.478 3.87 0.00 46.68 2.77
3687 4379 7.379529 GTCACCAAGTTGACATCTTTGTTAATG 59.620 37.037 3.87 0.00 44.62 1.90
3787 4479 8.644216 TGTTAAGACACCAGAACAGATAGTTAA 58.356 33.333 0.00 0.00 41.51 2.01
3788 4480 9.654663 GTTAAGACACCAGAACAGATAGTTAAT 57.345 33.333 0.00 0.00 41.51 1.40
3791 4483 9.877178 AAGACACCAGAACAGATAGTTAATTAG 57.123 33.333 0.00 0.00 41.51 1.73
3792 4484 7.982354 AGACACCAGAACAGATAGTTAATTAGC 59.018 37.037 0.00 0.00 41.51 3.09
3793 4485 7.852263 ACACCAGAACAGATAGTTAATTAGCT 58.148 34.615 7.05 7.05 41.51 3.32
3794 4486 7.766278 ACACCAGAACAGATAGTTAATTAGCTG 59.234 37.037 18.42 18.42 41.51 4.24
3795 4487 7.981789 CACCAGAACAGATAGTTAATTAGCTGA 59.018 37.037 24.64 0.00 41.51 4.26
3796 4488 8.540388 ACCAGAACAGATAGTTAATTAGCTGAA 58.460 33.333 24.64 0.00 41.51 3.02
3797 4489 9.553064 CCAGAACAGATAGTTAATTAGCTGAAT 57.447 33.333 24.64 14.97 41.51 2.57
3903 4600 7.041167 TGTTGATGTTCTGTACTTGATCCTTTG 60.041 37.037 0.00 0.00 0.00 2.77
3909 4606 9.349713 TGTTCTGTACTTGATCCTTTGTTTATT 57.650 29.630 0.00 0.00 0.00 1.40
4027 4767 2.483877 TCATTTCTGTCAACGCATCCAC 59.516 45.455 0.00 0.00 0.00 4.02
4071 4813 4.758688 CCCAGAACAAGATAAAAATGGCC 58.241 43.478 0.00 0.00 0.00 5.36
4101 4843 8.661352 AATTTCAGTATTTTCCCACAAAACAG 57.339 30.769 0.00 0.00 0.00 3.16
4155 4899 2.064014 GCAAAAAGATTCTGCTGCCAC 58.936 47.619 0.00 0.00 33.20 5.01
4191 4936 3.315191 TGATCACTTCAGATGCATGCATG 59.685 43.478 36.73 24.86 36.70 4.06
4192 4937 7.507786 ATGATCACTTCAGATGCATGCATGC 62.508 44.000 38.71 38.71 45.28 4.06
4209 4954 7.308169 GCATGCATGCGTATGATATATACCAAT 60.308 37.037 33.99 0.00 44.67 3.16
4210 4955 7.713764 TGCATGCGTATGATATATACCAATC 57.286 36.000 18.28 0.00 36.36 2.67
4211 4956 6.705825 TGCATGCGTATGATATATACCAATCC 59.294 38.462 18.28 0.00 36.36 3.01
4216 4966 7.342026 TGCGTATGATATATACCAATCCACTCT 59.658 37.037 0.00 0.00 0.00 3.24
4237 4987 5.295152 TCTTTCCTTTTCCAGTCTAACGAC 58.705 41.667 0.00 0.00 40.54 4.34
4250 5000 5.924254 CAGTCTAACGACCTTCATGTGTAAA 59.076 40.000 0.00 0.00 41.16 2.01
4261 5012 9.906660 GACCTTCATGTGTAAAATTTTCATGTA 57.093 29.630 21.31 15.21 0.00 2.29
4351 5102 1.098050 GGGAGCAGCTACAACATTGG 58.902 55.000 7.05 0.00 0.00 3.16
4520 5274 1.522092 GATGAGCATCCCGGTGACA 59.478 57.895 0.00 0.00 31.76 3.58
4522 5276 1.267574 ATGAGCATCCCGGTGACAGT 61.268 55.000 0.00 0.00 0.00 3.55
4592 5346 4.314440 AAGGACGCGCTGAGCCAA 62.314 61.111 5.73 0.00 44.76 4.52
4733 5487 5.485708 ACTCAGTTGATTTTCTAGCTAGGGT 59.514 40.000 20.58 4.54 0.00 4.34
4777 5563 5.896922 ATCAAGATCTACATTTTCTCGCG 57.103 39.130 0.00 0.00 0.00 5.87
4782 5568 2.954316 TCTACATTTTCTCGCGAGCAA 58.046 42.857 30.97 24.20 0.00 3.91
4797 5583 2.641305 GAGCAATCTCCTGCATGACTT 58.359 47.619 0.00 0.00 45.18 3.01
4806 5592 1.468565 CCTGCATGACTTGGCAATTCG 60.469 52.381 12.20 0.00 39.93 3.34
4853 5646 3.628646 AACTGATGGCGCCTGGGAC 62.629 63.158 29.70 14.16 0.00 4.46
4878 5671 2.890808 TTATCTCGGCATCTGGTCAC 57.109 50.000 0.00 0.00 0.00 3.67
4945 5738 3.845781 ACATGAAGTGTGTCTCCTTGT 57.154 42.857 0.00 0.00 40.28 3.16
4946 5739 3.733337 ACATGAAGTGTGTCTCCTTGTC 58.267 45.455 0.00 0.00 40.28 3.18
4947 5740 3.389329 ACATGAAGTGTGTCTCCTTGTCT 59.611 43.478 0.00 0.00 40.28 3.41
4948 5741 3.735237 TGAAGTGTGTCTCCTTGTCTC 57.265 47.619 0.00 0.00 0.00 3.36
4949 5742 2.365617 TGAAGTGTGTCTCCTTGTCTCC 59.634 50.000 0.00 0.00 0.00 3.71
4950 5743 2.390225 AGTGTGTCTCCTTGTCTCCT 57.610 50.000 0.00 0.00 0.00 3.69
4951 5744 2.683768 AGTGTGTCTCCTTGTCTCCTT 58.316 47.619 0.00 0.00 0.00 3.36
4972 5765 0.911769 TGTGACCATGTCCCAGATCC 59.088 55.000 0.00 0.00 0.00 3.36
5009 5804 2.030562 AACTGGAGACGTTGCCCG 59.969 61.111 5.34 2.06 44.03 6.13
5052 5849 0.454196 GCAATGGCCCGTAAAATCGT 59.546 50.000 0.00 0.00 0.00 3.73
5095 5894 4.797471 TGATCAATGGCAAAAAGAGAACG 58.203 39.130 0.00 0.00 0.00 3.95
5132 5932 0.466124 GCATCTGGACTAGACCACCC 59.534 60.000 10.05 0.00 38.49 4.61
5158 5960 5.234116 CAGGCATTGTAAAAACTTGGTGAAC 59.766 40.000 0.00 0.00 0.00 3.18
5187 5989 0.590195 GTGAGAGCACAACAAGGCTG 59.410 55.000 0.00 0.00 44.51 4.85
5215 6017 3.550030 CGATTGTTTTCCCTGTGTTGTCC 60.550 47.826 0.00 0.00 0.00 4.02
5254 6056 5.449304 TCAATATCGCTACATGTACACTCG 58.551 41.667 0.08 3.90 0.00 4.18
5279 6081 1.400846 CACGGTACTGTAGATCTGCGT 59.599 52.381 7.11 9.24 0.00 5.24
5288 6090 0.175760 TAGATCTGCGTTCCACTGGC 59.824 55.000 5.18 0.00 0.00 4.85
5304 6106 2.302260 CTGGCAGTCTTCGATCTCCTA 58.698 52.381 6.28 0.00 0.00 2.94
5328 6130 4.121227 CTGCTGTGTGTACGCGCG 62.121 66.667 30.96 30.96 31.86 6.86
5338 6140 1.131826 GTACGCGCGCTGATTTTGT 59.868 52.632 32.58 19.47 0.00 2.83
5345 6147 2.276282 GCGCGCTGATTTTGTGAAATAC 59.724 45.455 26.67 0.00 35.65 1.89
5346 6148 3.487536 CGCGCTGATTTTGTGAAATACA 58.512 40.909 5.56 0.00 35.65 2.29
5351 6153 6.966632 GCGCTGATTTTGTGAAATACATAGAA 59.033 34.615 0.00 0.00 39.48 2.10
5357 6159 6.978343 TTTGTGAAATACATAGAAGGGACG 57.022 37.500 0.00 0.00 39.48 4.79
5374 6176 1.849097 ACGGACAGTCAAAAGTCGAC 58.151 50.000 7.70 7.70 35.63 4.20
5379 6181 3.572584 GACAGTCAAAAGTCGACGGTAT 58.427 45.455 10.46 0.00 41.04 2.73
5388 6190 5.866335 AAAGTCGACGGTATAATTGCAAA 57.134 34.783 10.46 0.00 0.00 3.68
5390 6192 3.619929 AGTCGACGGTATAATTGCAAACC 59.380 43.478 10.46 5.49 0.00 3.27
5391 6193 3.619929 GTCGACGGTATAATTGCAAACCT 59.380 43.478 14.50 3.81 0.00 3.50
5392 6194 4.093850 GTCGACGGTATAATTGCAAACCTT 59.906 41.667 14.50 6.60 0.00 3.50
5393 6195 4.093703 TCGACGGTATAATTGCAAACCTTG 59.906 41.667 14.50 4.46 0.00 3.61
5409 6211 0.242017 CTTGCAACCTAAGCAGTGGC 59.758 55.000 0.00 0.00 43.75 5.01
5441 6243 2.747855 GGAAAGCAGGGACAGCCG 60.748 66.667 0.00 0.00 43.90 5.52
5462 6264 4.479993 CAGGCCCCGAAGCTCCAG 62.480 72.222 0.00 0.00 0.00 3.86
5465 6267 4.168291 GCCCCGAAGCTCCAGGAG 62.168 72.222 12.81 12.81 0.00 3.69
5509 6319 2.411904 CGAAGCTCCAGCCTCATAATC 58.588 52.381 0.00 0.00 43.38 1.75
5510 6320 2.036992 CGAAGCTCCAGCCTCATAATCT 59.963 50.000 0.00 0.00 43.38 2.40
5511 6321 3.663025 GAAGCTCCAGCCTCATAATCTC 58.337 50.000 0.00 0.00 43.38 2.75
5582 6394 7.311739 GGGGTAAGATAGGAGGAAGAAAAGAAA 60.312 40.741 0.00 0.00 0.00 2.52
5589 6401 6.701145 AGGAGGAAGAAAAGAAAACAAGAC 57.299 37.500 0.00 0.00 0.00 3.01
5605 6417 2.554032 CAAGACGATGGGCTTTTCACTT 59.446 45.455 0.00 0.00 0.00 3.16
5652 6464 3.519579 TCACGAACAAGTGAACGGTTAA 58.480 40.909 0.00 0.00 46.81 2.01
5663 6475 5.362263 AGTGAACGGTTAAAAGAACAGCTA 58.638 37.500 0.00 0.00 0.00 3.32
5666 6478 6.421801 GTGAACGGTTAAAAGAACAGCTACTA 59.578 38.462 0.00 0.00 0.00 1.82
5669 6481 8.699283 AACGGTTAAAAGAACAGCTACTATAG 57.301 34.615 0.00 0.00 0.00 1.31
5670 6482 8.059798 ACGGTTAAAAGAACAGCTACTATAGA 57.940 34.615 6.78 0.00 0.00 1.98
5671 6483 8.526147 ACGGTTAAAAGAACAGCTACTATAGAA 58.474 33.333 6.78 0.00 0.00 2.10
5672 6484 9.021863 CGGTTAAAAGAACAGCTACTATAGAAG 57.978 37.037 6.78 0.00 0.00 2.85
5692 6504 9.807921 ATAGAAGATCTAAGACTAAGAAGGAGG 57.192 37.037 0.00 0.00 31.96 4.30
5693 6505 7.648770 AGAAGATCTAAGACTAAGAAGGAGGT 58.351 38.462 0.00 0.00 0.00 3.85
5694 6506 8.783903 AGAAGATCTAAGACTAAGAAGGAGGTA 58.216 37.037 0.00 0.00 0.00 3.08
5695 6507 9.411189 GAAGATCTAAGACTAAGAAGGAGGTAA 57.589 37.037 0.00 0.00 0.00 2.85
5696 6508 9.771140 AAGATCTAAGACTAAGAAGGAGGTAAA 57.229 33.333 0.00 0.00 0.00 2.01
5697 6509 9.771140 AGATCTAAGACTAAGAAGGAGGTAAAA 57.229 33.333 0.00 0.00 0.00 1.52
5699 6511 9.771140 ATCTAAGACTAAGAAGGAGGTAAAAGA 57.229 33.333 0.00 0.00 0.00 2.52
5700 6512 9.771140 TCTAAGACTAAGAAGGAGGTAAAAGAT 57.229 33.333 0.00 0.00 0.00 2.40
5701 6513 9.810545 CTAAGACTAAGAAGGAGGTAAAAGATG 57.189 37.037 0.00 0.00 0.00 2.90
5702 6514 8.437274 AAGACTAAGAAGGAGGTAAAAGATGA 57.563 34.615 0.00 0.00 0.00 2.92
5703 6515 8.616799 AGACTAAGAAGGAGGTAAAAGATGAT 57.383 34.615 0.00 0.00 0.00 2.45
5704 6516 9.052365 AGACTAAGAAGGAGGTAAAAGATGATT 57.948 33.333 0.00 0.00 0.00 2.57
5709 6521 7.797062 AGAAGGAGGTAAAAGATGATTACTCC 58.203 38.462 0.00 0.00 34.40 3.85
5710 6522 7.403231 AGAAGGAGGTAAAAGATGATTACTCCA 59.597 37.037 9.72 0.00 35.41 3.86
5711 6523 7.130681 AGGAGGTAAAAGATGATTACTCCAG 57.869 40.000 9.72 0.00 35.41 3.86
5712 6524 6.100424 AGGAGGTAAAAGATGATTACTCCAGG 59.900 42.308 9.72 0.00 35.41 4.45
5713 6525 6.126739 GGAGGTAAAAGATGATTACTCCAGGT 60.127 42.308 0.00 0.00 34.38 4.00
5714 6526 7.272144 AGGTAAAAGATGATTACTCCAGGTT 57.728 36.000 0.00 0.00 34.44 3.50
5715 6527 8.388656 AGGTAAAAGATGATTACTCCAGGTTA 57.611 34.615 0.00 0.00 34.44 2.85
5716 6528 8.832735 AGGTAAAAGATGATTACTCCAGGTTAA 58.167 33.333 0.00 0.00 34.44 2.01
5717 6529 9.457436 GGTAAAAGATGATTACTCCAGGTTAAA 57.543 33.333 0.00 0.00 34.44 1.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
15 16 9.937577 GCGCTTGAACTGTTAAATAAAATTAAG 57.062 29.630 0.00 0.00 0.00 1.85
16 17 9.464714 TGCGCTTGAACTGTTAAATAAAATTAA 57.535 25.926 9.73 0.00 0.00 1.40
17 18 8.907685 GTGCGCTTGAACTGTTAAATAAAATTA 58.092 29.630 9.73 0.00 0.00 1.40
18 19 7.651704 AGTGCGCTTGAACTGTTAAATAAAATT 59.348 29.630 9.73 0.00 26.97 1.82
19 20 7.145323 AGTGCGCTTGAACTGTTAAATAAAAT 58.855 30.769 9.73 0.00 26.97 1.82
20 21 6.500041 AGTGCGCTTGAACTGTTAAATAAAA 58.500 32.000 9.73 0.00 26.97 1.52
21 22 6.017440 AGAGTGCGCTTGAACTGTTAAATAAA 60.017 34.615 9.73 0.00 28.83 1.40
22 23 5.468746 AGAGTGCGCTTGAACTGTTAAATAA 59.531 36.000 9.73 0.00 28.83 1.40
23 24 4.994852 AGAGTGCGCTTGAACTGTTAAATA 59.005 37.500 9.73 0.00 28.83 1.40
24 25 3.815401 AGAGTGCGCTTGAACTGTTAAAT 59.185 39.130 9.73 0.00 28.83 1.40
25 26 3.202906 AGAGTGCGCTTGAACTGTTAAA 58.797 40.909 9.73 0.00 28.83 1.52
26 27 2.833794 AGAGTGCGCTTGAACTGTTAA 58.166 42.857 9.73 0.00 28.83 2.01
27 28 2.526304 AGAGTGCGCTTGAACTGTTA 57.474 45.000 9.73 0.00 28.83 2.41
28 29 2.135933 GTAGAGTGCGCTTGAACTGTT 58.864 47.619 9.73 0.00 28.83 3.16
29 30 1.341531 AGTAGAGTGCGCTTGAACTGT 59.658 47.619 9.73 4.56 28.83 3.55
30 31 2.071688 AGTAGAGTGCGCTTGAACTG 57.928 50.000 9.73 0.00 28.83 3.16
31 32 3.936372 TTAGTAGAGTGCGCTTGAACT 57.064 42.857 9.73 2.65 32.60 3.01
32 33 3.988517 ACTTTAGTAGAGTGCGCTTGAAC 59.011 43.478 9.73 0.00 0.00 3.18
33 34 4.252971 ACTTTAGTAGAGTGCGCTTGAA 57.747 40.909 9.73 0.00 0.00 2.69
34 35 3.936372 ACTTTAGTAGAGTGCGCTTGA 57.064 42.857 9.73 0.00 0.00 3.02
36 37 7.287397 TGCACTACTTTAGTAGAGTGCGCTT 62.287 44.000 22.82 0.00 46.67 4.68
37 38 5.875108 TGCACTACTTTAGTAGAGTGCGCT 61.875 45.833 22.82 0.00 46.67 5.92
38 39 3.672511 TGCACTACTTTAGTAGAGTGCGC 60.673 47.826 22.82 0.00 46.67 6.09
39 40 4.092771 TGCACTACTTTAGTAGAGTGCG 57.907 45.455 22.82 9.96 46.67 5.34
46 47 7.165485 ACAACCAATCATGCACTACTTTAGTA 58.835 34.615 0.00 0.00 37.23 1.82
47 48 6.003950 ACAACCAATCATGCACTACTTTAGT 58.996 36.000 0.00 0.00 40.28 2.24
48 49 6.500684 ACAACCAATCATGCACTACTTTAG 57.499 37.500 0.00 0.00 0.00 1.85
49 50 6.892658 AACAACCAATCATGCACTACTTTA 57.107 33.333 0.00 0.00 0.00 1.85
50 51 5.789643 AACAACCAATCATGCACTACTTT 57.210 34.783 0.00 0.00 0.00 2.66
51 52 6.003950 ACTAACAACCAATCATGCACTACTT 58.996 36.000 0.00 0.00 0.00 2.24
52 53 5.560724 ACTAACAACCAATCATGCACTACT 58.439 37.500 0.00 0.00 0.00 2.57
53 54 5.880054 ACTAACAACCAATCATGCACTAC 57.120 39.130 0.00 0.00 0.00 2.73
54 55 6.892658 AAACTAACAACCAATCATGCACTA 57.107 33.333 0.00 0.00 0.00 2.74
55 56 5.789643 AAACTAACAACCAATCATGCACT 57.210 34.783 0.00 0.00 0.00 4.40
56 57 6.843069 AAAAACTAACAACCAATCATGCAC 57.157 33.333 0.00 0.00 0.00 4.57
82 83 8.695456 TGTGATCATCTGTGTATGTACTGTATT 58.305 33.333 0.00 0.00 0.00 1.89
83 84 8.237811 TGTGATCATCTGTGTATGTACTGTAT 57.762 34.615 0.00 0.00 0.00 2.29
84 85 7.639113 TGTGATCATCTGTGTATGTACTGTA 57.361 36.000 0.00 0.00 0.00 2.74
85 86 6.530019 TGTGATCATCTGTGTATGTACTGT 57.470 37.500 0.00 0.00 0.00 3.55
86 87 8.355913 ACTATGTGATCATCTGTGTATGTACTG 58.644 37.037 0.00 0.00 35.70 2.74
87 88 8.470657 ACTATGTGATCATCTGTGTATGTACT 57.529 34.615 0.00 0.00 35.70 2.73
88 89 9.833182 CTACTATGTGATCATCTGTGTATGTAC 57.167 37.037 0.00 0.00 35.70 2.90
89 90 9.014297 CCTACTATGTGATCATCTGTGTATGTA 57.986 37.037 0.00 0.00 35.70 2.29
90 91 7.725844 TCCTACTATGTGATCATCTGTGTATGT 59.274 37.037 0.00 0.00 35.70 2.29
91 92 8.026026 GTCCTACTATGTGATCATCTGTGTATG 58.974 40.741 0.00 0.00 35.70 2.39
92 93 7.947332 AGTCCTACTATGTGATCATCTGTGTAT 59.053 37.037 0.00 0.00 35.70 2.29
93 94 7.290813 AGTCCTACTATGTGATCATCTGTGTA 58.709 38.462 0.00 0.00 35.70 2.90
94 95 6.132658 AGTCCTACTATGTGATCATCTGTGT 58.867 40.000 0.00 0.00 35.70 3.72
95 96 6.647334 AGTCCTACTATGTGATCATCTGTG 57.353 41.667 0.00 0.00 35.70 3.66
96 97 6.836007 TCAAGTCCTACTATGTGATCATCTGT 59.164 38.462 0.00 0.00 35.70 3.41
97 98 7.282332 TCAAGTCCTACTATGTGATCATCTG 57.718 40.000 0.00 0.00 35.70 2.90
98 99 7.904558 TTCAAGTCCTACTATGTGATCATCT 57.095 36.000 0.00 0.00 35.70 2.90
99 100 7.816995 GGATTCAAGTCCTACTATGTGATCATC 59.183 40.741 0.00 0.00 35.32 2.92
100 101 7.512058 AGGATTCAAGTCCTACTATGTGATCAT 59.488 37.037 0.00 0.00 46.70 2.45
101 102 6.841229 AGGATTCAAGTCCTACTATGTGATCA 59.159 38.462 0.00 0.00 46.70 2.92
102 103 7.151308 CAGGATTCAAGTCCTACTATGTGATC 58.849 42.308 0.00 0.00 46.85 2.92
103 104 6.042552 CCAGGATTCAAGTCCTACTATGTGAT 59.957 42.308 0.00 0.00 46.85 3.06
104 105 5.363868 CCAGGATTCAAGTCCTACTATGTGA 59.636 44.000 0.00 0.00 46.85 3.58
105 106 5.129485 ACCAGGATTCAAGTCCTACTATGTG 59.871 44.000 0.00 0.00 46.85 3.21
106 107 5.281314 ACCAGGATTCAAGTCCTACTATGT 58.719 41.667 0.00 0.00 46.85 2.29
107 108 5.878406 ACCAGGATTCAAGTCCTACTATG 57.122 43.478 0.00 0.00 46.85 2.23
108 109 6.078664 CCTACCAGGATTCAAGTCCTACTAT 58.921 44.000 0.00 0.00 46.85 2.12
109 110 5.043582 ACCTACCAGGATTCAAGTCCTACTA 60.044 44.000 0.00 0.00 46.85 1.82
110 111 4.264895 ACCTACCAGGATTCAAGTCCTACT 60.265 45.833 0.00 0.00 46.85 2.57
111 112 4.031611 ACCTACCAGGATTCAAGTCCTAC 58.968 47.826 0.00 0.00 46.85 3.18
112 113 4.348020 ACCTACCAGGATTCAAGTCCTA 57.652 45.455 0.00 0.00 46.85 2.94
114 115 4.010349 CAAACCTACCAGGATTCAAGTCC 58.990 47.826 0.00 0.00 37.67 3.85
115 116 4.010349 CCAAACCTACCAGGATTCAAGTC 58.990 47.826 0.00 0.00 37.67 3.01
116 117 3.397955 ACCAAACCTACCAGGATTCAAGT 59.602 43.478 0.00 0.00 37.67 3.16
117 118 4.034285 ACCAAACCTACCAGGATTCAAG 57.966 45.455 0.00 0.00 37.67 3.02
118 119 4.403734 GAACCAAACCTACCAGGATTCAA 58.596 43.478 0.00 0.00 37.67 2.69
119 120 3.245122 GGAACCAAACCTACCAGGATTCA 60.245 47.826 0.00 0.00 37.67 2.57
120 121 3.245122 TGGAACCAAACCTACCAGGATTC 60.245 47.826 0.00 0.00 37.67 2.52
121 122 2.719705 TGGAACCAAACCTACCAGGATT 59.280 45.455 0.00 0.00 37.67 3.01
122 123 2.041216 GTGGAACCAAACCTACCAGGAT 59.959 50.000 0.00 0.00 37.67 3.24
123 124 1.422402 GTGGAACCAAACCTACCAGGA 59.578 52.381 0.00 0.00 37.67 3.86
124 125 1.905637 GTGGAACCAAACCTACCAGG 58.094 55.000 0.00 0.00 42.49 4.45
137 138 3.489568 CGGTTAGGTTTTTGTGGTGGAAC 60.490 47.826 0.00 0.00 0.00 3.62
138 139 2.688958 CGGTTAGGTTTTTGTGGTGGAA 59.311 45.455 0.00 0.00 0.00 3.53
139 140 2.299521 CGGTTAGGTTTTTGTGGTGGA 58.700 47.619 0.00 0.00 0.00 4.02
140 141 2.025898 ACGGTTAGGTTTTTGTGGTGG 58.974 47.619 0.00 0.00 0.00 4.61
141 142 2.946990 AGACGGTTAGGTTTTTGTGGTG 59.053 45.455 0.00 0.00 0.00 4.17
142 143 3.208594 GAGACGGTTAGGTTTTTGTGGT 58.791 45.455 0.00 0.00 0.00 4.16
143 144 2.222445 CGAGACGGTTAGGTTTTTGTGG 59.778 50.000 0.00 0.00 0.00 4.17
144 145 3.125316 TCGAGACGGTTAGGTTTTTGTG 58.875 45.455 0.00 0.00 0.00 3.33
145 146 3.457610 TCGAGACGGTTAGGTTTTTGT 57.542 42.857 0.00 0.00 0.00 2.83
146 147 4.565564 CCTATCGAGACGGTTAGGTTTTTG 59.434 45.833 0.00 0.00 32.58 2.44
147 148 4.221482 ACCTATCGAGACGGTTAGGTTTTT 59.779 41.667 7.24 0.00 40.55 1.94
148 149 3.766051 ACCTATCGAGACGGTTAGGTTTT 59.234 43.478 7.24 0.00 40.55 2.43
149 150 3.359950 ACCTATCGAGACGGTTAGGTTT 58.640 45.455 7.24 0.00 40.55 3.27
150 151 3.010200 ACCTATCGAGACGGTTAGGTT 57.990 47.619 7.24 0.00 40.55 3.50
151 152 2.686915 CAACCTATCGAGACGGTTAGGT 59.313 50.000 13.40 10.51 42.98 3.08
152 153 2.686915 ACAACCTATCGAGACGGTTAGG 59.313 50.000 13.40 9.94 38.90 2.69
153 154 3.128242 ACACAACCTATCGAGACGGTTAG 59.872 47.826 13.40 11.81 38.90 2.34
154 155 3.084039 ACACAACCTATCGAGACGGTTA 58.916 45.455 13.40 0.00 38.90 2.85
155 156 1.891150 ACACAACCTATCGAGACGGTT 59.109 47.619 9.29 9.29 41.47 4.44
156 157 1.542492 ACACAACCTATCGAGACGGT 58.458 50.000 0.00 0.00 0.00 4.83
157 158 2.649331 AACACAACCTATCGAGACGG 57.351 50.000 0.00 0.00 0.00 4.79
158 159 4.352600 ACTAACACAACCTATCGAGACG 57.647 45.455 0.00 0.00 0.00 4.18
159 160 5.467705 ACAACTAACACAACCTATCGAGAC 58.532 41.667 0.00 0.00 0.00 3.36
160 161 5.717078 ACAACTAACACAACCTATCGAGA 57.283 39.130 0.00 0.00 0.00 4.04
161 162 5.924254 TCAACAACTAACACAACCTATCGAG 59.076 40.000 0.00 0.00 0.00 4.04
162 163 5.693104 GTCAACAACTAACACAACCTATCGA 59.307 40.000 0.00 0.00 0.00 3.59
163 164 5.464057 TGTCAACAACTAACACAACCTATCG 59.536 40.000 0.00 0.00 0.00 2.92
164 165 6.854496 TGTCAACAACTAACACAACCTATC 57.146 37.500 0.00 0.00 0.00 2.08
165 166 7.051623 TCTTGTCAACAACTAACACAACCTAT 58.948 34.615 0.00 0.00 0.00 2.57
166 167 6.408035 TCTTGTCAACAACTAACACAACCTA 58.592 36.000 0.00 0.00 0.00 3.08
167 168 5.250200 TCTTGTCAACAACTAACACAACCT 58.750 37.500 0.00 0.00 0.00 3.50
168 169 5.554822 TCTTGTCAACAACTAACACAACC 57.445 39.130 0.00 0.00 0.00 3.77
169 170 5.798434 GGTTCTTGTCAACAACTAACACAAC 59.202 40.000 13.90 0.00 32.49 3.32
170 171 5.473846 TGGTTCTTGTCAACAACTAACACAA 59.526 36.000 13.90 0.00 32.49 3.33
171 172 5.004448 TGGTTCTTGTCAACAACTAACACA 58.996 37.500 13.90 9.15 32.49 3.72
172 173 5.554822 TGGTTCTTGTCAACAACTAACAC 57.445 39.130 13.90 7.57 32.49 3.32
173 174 5.883115 TGATGGTTCTTGTCAACAACTAACA 59.117 36.000 13.90 0.92 32.49 2.41
174 175 6.260050 TCTGATGGTTCTTGTCAACAACTAAC 59.740 38.462 4.07 7.40 0.00 2.34
175 176 6.353323 TCTGATGGTTCTTGTCAACAACTAA 58.647 36.000 4.07 0.00 0.00 2.24
176 177 5.924356 TCTGATGGTTCTTGTCAACAACTA 58.076 37.500 4.07 0.00 0.00 2.24
177 178 4.780815 TCTGATGGTTCTTGTCAACAACT 58.219 39.130 4.07 0.00 0.00 3.16
178 179 4.816385 TCTCTGATGGTTCTTGTCAACAAC 59.184 41.667 0.00 0.00 0.00 3.32
179 180 5.034852 TCTCTGATGGTTCTTGTCAACAA 57.965 39.130 0.00 0.00 0.00 2.83
180 181 4.687901 TCTCTGATGGTTCTTGTCAACA 57.312 40.909 0.00 0.00 0.00 3.33
181 182 4.142730 GCATCTCTGATGGTTCTTGTCAAC 60.143 45.833 9.24 0.00 0.00 3.18
182 183 4.005650 GCATCTCTGATGGTTCTTGTCAA 58.994 43.478 9.24 0.00 0.00 3.18
183 184 3.262660 AGCATCTCTGATGGTTCTTGTCA 59.737 43.478 6.45 0.00 0.00 3.58
184 185 3.622163 CAGCATCTCTGATGGTTCTTGTC 59.378 47.826 9.19 0.00 45.72 3.18
185 186 3.008813 ACAGCATCTCTGATGGTTCTTGT 59.991 43.478 9.19 2.94 45.72 3.16
186 187 3.607741 ACAGCATCTCTGATGGTTCTTG 58.392 45.455 9.19 2.40 45.72 3.02
187 188 3.996921 ACAGCATCTCTGATGGTTCTT 57.003 42.857 9.19 0.00 45.72 2.52
188 189 5.181748 GTTTACAGCATCTCTGATGGTTCT 58.818 41.667 9.19 1.95 45.72 3.01
189 190 4.333926 GGTTTACAGCATCTCTGATGGTTC 59.666 45.833 9.19 0.00 45.72 3.62
190 191 4.263462 TGGTTTACAGCATCTCTGATGGTT 60.263 41.667 9.19 5.12 45.72 3.67
191 192 3.264193 TGGTTTACAGCATCTCTGATGGT 59.736 43.478 6.45 6.45 45.72 3.55
192 193 3.877559 TGGTTTACAGCATCTCTGATGG 58.122 45.455 9.24 0.00 45.72 3.51
193 194 5.392380 GGTTTGGTTTACAGCATCTCTGATG 60.392 44.000 3.42 3.42 45.72 3.07
194 195 4.702131 GGTTTGGTTTACAGCATCTCTGAT 59.298 41.667 0.00 0.00 45.72 2.90
195 196 4.072131 GGTTTGGTTTACAGCATCTCTGA 58.928 43.478 0.00 0.00 45.72 3.27
197 198 3.421844 GGGTTTGGTTTACAGCATCTCT 58.578 45.455 0.00 0.00 0.00 3.10
198 199 2.492088 GGGGTTTGGTTTACAGCATCTC 59.508 50.000 0.00 0.00 0.00 2.75
199 200 2.110011 AGGGGTTTGGTTTACAGCATCT 59.890 45.455 0.00 0.00 0.00 2.90
200 201 2.525368 AGGGGTTTGGTTTACAGCATC 58.475 47.619 0.00 0.00 0.00 3.91
201 202 2.694616 AGGGGTTTGGTTTACAGCAT 57.305 45.000 0.00 0.00 0.00 3.79
202 203 3.596940 TTAGGGGTTTGGTTTACAGCA 57.403 42.857 0.00 0.00 0.00 4.41
203 204 4.770531 AGATTTAGGGGTTTGGTTTACAGC 59.229 41.667 0.00 0.00 0.00 4.40
204 205 5.417894 GGAGATTTAGGGGTTTGGTTTACAG 59.582 44.000 0.00 0.00 0.00 2.74
205 206 5.326900 GGAGATTTAGGGGTTTGGTTTACA 58.673 41.667 0.00 0.00 0.00 2.41
206 207 4.708421 GGGAGATTTAGGGGTTTGGTTTAC 59.292 45.833 0.00 0.00 0.00 2.01
207 208 4.264487 GGGGAGATTTAGGGGTTTGGTTTA 60.264 45.833 0.00 0.00 0.00 2.01
208 209 3.503412 GGGGAGATTTAGGGGTTTGGTTT 60.503 47.826 0.00 0.00 0.00 3.27
209 210 2.043939 GGGGAGATTTAGGGGTTTGGTT 59.956 50.000 0.00 0.00 0.00 3.67
210 211 1.644337 GGGGAGATTTAGGGGTTTGGT 59.356 52.381 0.00 0.00 0.00 3.67
211 212 1.063190 GGGGGAGATTTAGGGGTTTGG 60.063 57.143 0.00 0.00 0.00 3.28
212 213 1.930204 AGGGGGAGATTTAGGGGTTTG 59.070 52.381 0.00 0.00 0.00 2.93
213 214 2.215093 GAGGGGGAGATTTAGGGGTTT 58.785 52.381 0.00 0.00 0.00 3.27
214 215 1.631181 GGAGGGGGAGATTTAGGGGTT 60.631 57.143 0.00 0.00 0.00 4.11
215 216 0.028955 GGAGGGGGAGATTTAGGGGT 60.029 60.000 0.00 0.00 0.00 4.95
216 217 1.128188 CGGAGGGGGAGATTTAGGGG 61.128 65.000 0.00 0.00 0.00 4.79
217 218 0.400093 ACGGAGGGGGAGATTTAGGG 60.400 60.000 0.00 0.00 0.00 3.53
218 219 0.759346 CACGGAGGGGGAGATTTAGG 59.241 60.000 0.00 0.00 0.00 2.69
219 220 1.413077 GACACGGAGGGGGAGATTTAG 59.587 57.143 0.00 0.00 0.00 1.85
220 221 1.007963 AGACACGGAGGGGGAGATTTA 59.992 52.381 0.00 0.00 0.00 1.40
221 222 0.252742 AGACACGGAGGGGGAGATTT 60.253 55.000 0.00 0.00 0.00 2.17
222 223 0.688087 GAGACACGGAGGGGGAGATT 60.688 60.000 0.00 0.00 0.00 2.40
223 224 1.075896 GAGACACGGAGGGGGAGAT 60.076 63.158 0.00 0.00 0.00 2.75
224 225 2.239439 AGAGACACGGAGGGGGAGA 61.239 63.158 0.00 0.00 0.00 3.71
225 226 2.055042 CAGAGACACGGAGGGGGAG 61.055 68.421 0.00 0.00 0.00 4.30
226 227 2.037367 CAGAGACACGGAGGGGGA 59.963 66.667 0.00 0.00 0.00 4.81
227 228 2.283966 ACAGAGACACGGAGGGGG 60.284 66.667 0.00 0.00 0.00 5.40
228 229 0.900647 AAGACAGAGACACGGAGGGG 60.901 60.000 0.00 0.00 0.00 4.79
229 230 0.969894 AAAGACAGAGACACGGAGGG 59.030 55.000 0.00 0.00 0.00 4.30
230 231 1.889829 AGAAAGACAGAGACACGGAGG 59.110 52.381 0.00 0.00 0.00 4.30
231 232 2.294791 ACAGAAAGACAGAGACACGGAG 59.705 50.000 0.00 0.00 0.00 4.63
232 233 2.034685 CACAGAAAGACAGAGACACGGA 59.965 50.000 0.00 0.00 0.00 4.69
233 234 2.223829 ACACAGAAAGACAGAGACACGG 60.224 50.000 0.00 0.00 0.00 4.94
234 235 2.791560 CACACAGAAAGACAGAGACACG 59.208 50.000 0.00 0.00 0.00 4.49
235 236 2.541762 GCACACAGAAAGACAGAGACAC 59.458 50.000 0.00 0.00 0.00 3.67
236 237 2.168313 TGCACACAGAAAGACAGAGACA 59.832 45.455 0.00 0.00 0.00 3.41
237 238 2.541762 GTGCACACAGAAAGACAGAGAC 59.458 50.000 13.17 0.00 0.00 3.36
238 239 2.168313 TGTGCACACAGAAAGACAGAGA 59.832 45.455 17.42 0.00 36.21 3.10
239 240 2.554142 TGTGCACACAGAAAGACAGAG 58.446 47.619 17.42 0.00 36.21 3.35
240 241 2.689553 TGTGCACACAGAAAGACAGA 57.310 45.000 17.42 0.00 36.21 3.41
241 242 2.615447 ACATGTGCACACAGAAAGACAG 59.385 45.455 24.37 4.61 45.48 3.51
242 243 2.355444 CACATGTGCACACAGAAAGACA 59.645 45.455 24.37 0.00 45.48 3.41
243 244 2.613595 TCACATGTGCACACAGAAAGAC 59.386 45.455 24.37 0.00 45.48 3.01
244 245 2.916640 TCACATGTGCACACAGAAAGA 58.083 42.857 24.37 14.68 45.48 2.52
245 246 3.666111 CGATCACATGTGCACACAGAAAG 60.666 47.826 24.37 13.57 45.48 2.62
246 247 2.223845 CGATCACATGTGCACACAGAAA 59.776 45.455 24.37 11.43 45.48 2.52
247 248 1.799994 CGATCACATGTGCACACAGAA 59.200 47.619 24.37 9.03 45.48 3.02
248 249 1.431496 CGATCACATGTGCACACAGA 58.569 50.000 24.37 19.81 45.48 3.41
249 250 0.445043 CCGATCACATGTGCACACAG 59.555 55.000 24.37 20.01 45.48 3.66
250 251 0.250252 ACCGATCACATGTGCACACA 60.250 50.000 24.37 5.85 46.44 3.72
251 252 0.166597 CACCGATCACATGTGCACAC 59.833 55.000 24.37 7.29 0.00 3.82
252 253 2.542432 CACCGATCACATGTGCACA 58.458 52.632 24.08 24.08 0.00 4.57
256 257 0.873721 TTGTGCACCGATCACATGTG 59.126 50.000 20.18 20.18 43.12 3.21
257 258 0.874390 GTTGTGCACCGATCACATGT 59.126 50.000 15.69 0.00 43.12 3.21
258 259 0.873721 TGTTGTGCACCGATCACATG 59.126 50.000 15.69 0.00 43.12 3.21
259 260 1.159285 CTGTTGTGCACCGATCACAT 58.841 50.000 15.69 0.00 43.12 3.21
260 261 1.506309 GCTGTTGTGCACCGATCACA 61.506 55.000 15.69 8.37 42.10 3.58
261 262 1.207593 GCTGTTGTGCACCGATCAC 59.792 57.895 15.69 3.94 35.14 3.06
262 263 1.965930 GGCTGTTGTGCACCGATCA 60.966 57.895 15.69 7.23 34.04 2.92
263 264 2.690778 GGGCTGTTGTGCACCGATC 61.691 63.158 15.69 2.63 34.04 3.69
264 265 2.672996 GGGCTGTTGTGCACCGAT 60.673 61.111 15.69 0.00 34.04 4.18
265 266 2.118233 TATGGGCTGTTGTGCACCGA 62.118 55.000 15.69 0.00 35.05 4.69
266 267 1.673993 TATGGGCTGTTGTGCACCG 60.674 57.895 15.69 1.14 35.05 4.94
287 288 0.032952 GCCAGTCGAGTTGGTACACA 59.967 55.000 15.29 0.00 39.29 3.72
289 290 1.116536 TGGCCAGTCGAGTTGGTACA 61.117 55.000 0.00 12.25 38.02 2.90
290 291 0.249398 ATGGCCAGTCGAGTTGGTAC 59.751 55.000 13.05 10.31 38.02 3.34
304 305 0.107945 GATAGATCTCCGGCATGGCC 60.108 60.000 14.46 0.00 46.75 5.36
368 381 2.185867 GGCACGTATCTTCCGGCA 59.814 61.111 0.00 0.00 0.00 5.69
386 404 2.483188 CGGACTGGCCTAATCACCTAAC 60.483 54.545 3.32 0.00 0.00 2.34
387 405 1.760613 CGGACTGGCCTAATCACCTAA 59.239 52.381 3.32 0.00 0.00 2.69
388 406 1.410004 CGGACTGGCCTAATCACCTA 58.590 55.000 3.32 0.00 0.00 3.08
389 407 1.972660 GCGGACTGGCCTAATCACCT 61.973 60.000 3.32 0.00 0.00 4.00
390 408 1.523938 GCGGACTGGCCTAATCACC 60.524 63.158 3.32 0.00 0.00 4.02
424 446 2.180862 CGAGATGAGAGACGCGGGA 61.181 63.158 12.47 0.00 0.00 5.14
430 452 2.357323 TCATGCAGACGAGATGAGAGAC 59.643 50.000 0.00 0.00 0.00 3.36
603 660 2.299297 TGGAGAGACTTTTCCTCGGTTC 59.701 50.000 8.05 0.00 35.88 3.62
718 1078 1.577729 TCACAGAGATGGAGAGGGGAT 59.422 52.381 0.00 0.00 0.00 3.85
782 1155 2.165845 CGAGGGGTATTAATAGGAGCCG 59.834 54.545 0.00 0.00 0.00 5.52
848 1232 4.810790 CTCCTGATCGGTATGATTGTACC 58.189 47.826 0.00 0.00 40.61 3.34
938 1376 1.517257 AAGCGATCAACGAGAGGCG 60.517 57.895 0.00 0.00 45.77 5.52
939 1377 0.458543 TCAAGCGATCAACGAGAGGC 60.459 55.000 0.00 0.00 45.77 4.70
1223 1695 4.625607 AAGCTGCTTGGGTATATAGGAC 57.374 45.455 15.16 0.00 0.00 3.85
1224 1696 6.952605 ATTAAGCTGCTTGGGTATATAGGA 57.047 37.500 24.35 0.00 0.00 2.94
1225 1697 8.100791 TGTAATTAAGCTGCTTGGGTATATAGG 58.899 37.037 24.35 0.00 0.00 2.57
1226 1698 8.936864 GTGTAATTAAGCTGCTTGGGTATATAG 58.063 37.037 24.35 0.00 0.00 1.31
1227 1699 7.881232 GGTGTAATTAAGCTGCTTGGGTATATA 59.119 37.037 24.35 6.53 0.00 0.86
1228 1700 6.715264 GGTGTAATTAAGCTGCTTGGGTATAT 59.285 38.462 24.35 6.53 0.00 0.86
1314 1805 9.273016 ACTAACCATATGTGCATAAGTATGTTC 57.727 33.333 1.24 0.00 36.11 3.18
1322 1816 7.773224 AGCAAAGTACTAACCATATGTGCATAA 59.227 33.333 0.00 0.00 0.00 1.90
1330 1824 6.349300 CACAGGAGCAAAGTACTAACCATAT 58.651 40.000 0.00 0.00 0.00 1.78
1331 1825 5.730550 CACAGGAGCAAAGTACTAACCATA 58.269 41.667 0.00 0.00 0.00 2.74
1332 1826 4.579869 CACAGGAGCAAAGTACTAACCAT 58.420 43.478 0.00 0.00 0.00 3.55
1333 1827 3.805807 GCACAGGAGCAAAGTACTAACCA 60.806 47.826 0.00 0.00 0.00 3.67
1334 1828 2.742589 GCACAGGAGCAAAGTACTAACC 59.257 50.000 0.00 0.00 0.00 2.85
1335 1829 3.399330 TGCACAGGAGCAAAGTACTAAC 58.601 45.455 0.00 0.00 42.46 2.34
1336 1830 3.762407 TGCACAGGAGCAAAGTACTAA 57.238 42.857 0.00 0.00 42.46 2.24
1468 1968 5.747675 CACCGCAGAGATATCATCATACATC 59.252 44.000 5.32 0.00 0.00 3.06
1476 1976 7.652524 AAGATATACACCGCAGAGATATCAT 57.347 36.000 5.32 0.00 0.00 2.45
1477 1977 7.468141 AAAGATATACACCGCAGAGATATCA 57.532 36.000 5.32 0.00 0.00 2.15
1478 1978 8.029522 TCAAAAGATATACACCGCAGAGATATC 58.970 37.037 0.00 0.00 0.00 1.63
1528 2030 6.255887 ACTGAAGACTTGTCTGTTTAGAAACG 59.744 38.462 3.87 0.00 41.74 3.60
1529 2031 7.541122 ACTGAAGACTTGTCTGTTTAGAAAC 57.459 36.000 3.87 0.00 39.33 2.78
1591 2097 9.919416 TGGGATGTGATGATTTCTTCTTTATAA 57.081 29.630 0.00 0.00 0.00 0.98
1609 2118 9.533253 GGACAAATAATTTAATTCTGGGATGTG 57.467 33.333 0.00 0.00 0.00 3.21
1610 2119 8.413229 CGGACAAATAATTTAATTCTGGGATGT 58.587 33.333 0.00 0.00 0.00 3.06
1689 2203 3.782889 AGTTGAAACCAACAGAGCAAC 57.217 42.857 10.41 0.00 44.71 4.17
1765 2281 6.461110 ACAGGCTGAAAATTAATGGAGATG 57.539 37.500 23.66 0.00 0.00 2.90
1784 2300 6.513806 TGTTCATGTCATGGAATTAACAGG 57.486 37.500 12.90 0.00 0.00 4.00
1921 2465 1.630369 TCACTTCAGTTATGGCTGGCT 59.370 47.619 2.00 0.00 37.12 4.75
1922 2466 1.740025 GTCACTTCAGTTATGGCTGGC 59.260 52.381 0.00 0.00 37.12 4.85
1923 2467 2.290260 TGGTCACTTCAGTTATGGCTGG 60.290 50.000 0.00 0.00 37.12 4.85
1924 2468 2.744202 GTGGTCACTTCAGTTATGGCTG 59.256 50.000 0.00 0.00 37.81 4.85
2066 2629 1.822990 AGAAAAGCATGGGCACATCAG 59.177 47.619 0.00 0.00 44.61 2.90
2125 2695 5.600696 TCTTGCCTTTGGATCAAGTTTTTC 58.399 37.500 0.00 0.00 38.56 2.29
2185 2761 4.700692 TCTCTACAGCCTACAACAGTAGTG 59.299 45.833 0.00 0.00 34.70 2.74
2194 2770 6.798427 AGAATTTGATCTCTACAGCCTACA 57.202 37.500 0.00 0.00 0.00 2.74
2195 2771 6.018343 GCAAGAATTTGATCTCTACAGCCTAC 60.018 42.308 0.00 0.00 36.36 3.18
2196 2772 6.051717 GCAAGAATTTGATCTCTACAGCCTA 58.948 40.000 0.00 0.00 36.36 3.93
2197 2773 4.880696 GCAAGAATTTGATCTCTACAGCCT 59.119 41.667 0.00 0.00 36.36 4.58
2199 2775 5.122869 TGTGCAAGAATTTGATCTCTACAGC 59.877 40.000 0.00 0.00 36.36 4.40
2200 2776 6.370994 ACTGTGCAAGAATTTGATCTCTACAG 59.629 38.462 0.00 0.00 38.77 2.74
2201 2777 6.233434 ACTGTGCAAGAATTTGATCTCTACA 58.767 36.000 0.00 0.00 36.36 2.74
2203 2779 9.453572 AATTACTGTGCAAGAATTTGATCTCTA 57.546 29.630 0.00 0.00 36.36 2.43
2233 2855 3.048600 TCCCATGTCCAGAATAAGAGGG 58.951 50.000 0.00 0.00 35.09 4.30
2244 2866 0.548031 GATCAAGCCTCCCATGTCCA 59.452 55.000 0.00 0.00 0.00 4.02
2245 2867 0.548031 TGATCAAGCCTCCCATGTCC 59.452 55.000 0.00 0.00 0.00 4.02
2348 2976 0.180406 CTTCTGTTATGGGGACGGGG 59.820 60.000 0.00 0.00 0.00 5.73
2619 3249 5.526846 GGCATCTTTCCTATTCTTGTGAGAG 59.473 44.000 0.00 0.00 32.44 3.20
2735 3367 3.087031 CAGAGCCACATTCAATCAAGGT 58.913 45.455 0.00 0.00 0.00 3.50
2740 3372 4.978083 AACATCAGAGCCACATTCAATC 57.022 40.909 0.00 0.00 0.00 2.67
2763 3395 9.061435 CACTTCTCCATTTTTAAGAGAAAGTCT 57.939 33.333 5.82 0.00 43.92 3.24
2792 3428 6.204301 CCATGAATCTAATGTTGTCTGGCTAG 59.796 42.308 0.00 0.00 0.00 3.42
2794 3430 4.885907 CCATGAATCTAATGTTGTCTGGCT 59.114 41.667 0.00 0.00 0.00 4.75
2795 3431 4.883585 TCCATGAATCTAATGTTGTCTGGC 59.116 41.667 0.00 0.00 0.00 4.85
2796 3432 6.514541 GCATCCATGAATCTAATGTTGTCTGG 60.515 42.308 0.00 0.00 0.00 3.86
2797 3433 6.038936 TGCATCCATGAATCTAATGTTGTCTG 59.961 38.462 0.00 0.00 0.00 3.51
2799 3435 6.381481 TGCATCCATGAATCTAATGTTGTC 57.619 37.500 0.00 0.00 0.00 3.18
2801 3437 8.141909 AGATTTGCATCCATGAATCTAATGTTG 58.858 33.333 7.18 0.00 0.00 3.33
2802 3438 8.246430 AGATTTGCATCCATGAATCTAATGTT 57.754 30.769 7.18 0.00 0.00 2.71
2803 3439 7.834881 AGATTTGCATCCATGAATCTAATGT 57.165 32.000 7.18 0.00 0.00 2.71
2823 3481 3.882888 TCTTTTGGAACGTGCTCAAGATT 59.117 39.130 0.00 0.00 0.00 2.40
2908 3571 4.338964 TGCATGCGATTTCTGAATACCATT 59.661 37.500 14.09 0.00 0.00 3.16
2911 3574 3.969117 TGCATGCGATTTCTGAATACC 57.031 42.857 14.09 0.00 0.00 2.73
3110 3773 3.077695 ACTCTGTCTTCTTCCCCTTAGGA 59.922 47.826 0.00 0.00 45.68 2.94
3128 3791 0.615331 ATTCGTGCATGACCCACTCT 59.385 50.000 8.48 0.00 0.00 3.24
3343 4015 9.573133 ACAAATATATAGTTTTCTTGCTTGTGC 57.427 29.630 0.00 0.00 40.20 4.57
3392 4066 3.415457 TTCATTTTCAATGCCCCAACC 57.585 42.857 0.00 0.00 0.00 3.77
3394 4068 4.703379 AGTTTCATTTTCAATGCCCCAA 57.297 36.364 0.00 0.00 0.00 4.12
3395 4069 4.102210 TCAAGTTTCATTTTCAATGCCCCA 59.898 37.500 0.00 0.00 0.00 4.96
3431 4105 7.483307 ACTTATCATAAAATGCACCACATGTC 58.517 34.615 0.00 0.00 39.60 3.06
3452 4126 8.361889 GGTTTTTGTTTCTTTAGGCCATACTTA 58.638 33.333 5.01 0.00 0.00 2.24
3461 4135 7.604545 TGAACCAAAGGTTTTTGTTTCTTTAGG 59.395 33.333 2.55 0.00 46.95 2.69
3681 4373 6.848451 TCGCAAATTAAGGGAGTTCATTAAC 58.152 36.000 0.00 0.00 35.72 2.01
3687 4379 9.665264 CTTAATTATCGCAAATTAAGGGAGTTC 57.335 33.333 21.99 0.00 46.37 3.01
3795 4487 9.406828 GCTACCACGAATTTTCTAAGAAAAATT 57.593 29.630 11.42 11.42 46.34 1.82
3796 4488 8.027189 GGCTACCACGAATTTTCTAAGAAAAAT 58.973 33.333 0.00 3.85 39.83 1.82
3797 4489 7.013464 TGGCTACCACGAATTTTCTAAGAAAAA 59.987 33.333 0.00 1.62 32.99 1.94
3801 4493 5.046878 TCTGGCTACCACGAATTTTCTAAGA 60.047 40.000 0.00 0.00 0.00 2.10
3903 4600 5.619981 GCATGAGAGTGACCCACAAATAAAC 60.620 44.000 0.00 0.00 36.74 2.01
3909 4606 0.036732 GGCATGAGAGTGACCCACAA 59.963 55.000 0.00 0.00 36.74 3.33
4027 4767 4.491924 GGCGACAACTGTATGTTAATGACG 60.492 45.833 0.00 0.00 37.07 4.35
4032 4772 3.007074 TCTGGGCGACAACTGTATGTTAA 59.993 43.478 0.00 0.00 37.07 2.01
4071 4813 9.757227 TTTGTGGGAAAATACTGAAATTACTTG 57.243 29.630 0.00 0.00 0.00 3.16
4122 4864 7.436080 CAGAATCTTTTTGCAAAGCTTGAGTAA 59.564 33.333 12.41 0.00 39.56 2.24
4191 4936 7.717568 AGAGTGGATTGGTATATATCATACGC 58.282 38.462 0.00 0.00 0.00 4.42
4195 4940 9.343994 AGGAAAGAGTGGATTGGTATATATCAT 57.656 33.333 0.00 0.00 0.00 2.45
4196 4941 8.742125 AGGAAAGAGTGGATTGGTATATATCA 57.258 34.615 0.00 0.00 0.00 2.15
4209 4954 3.716872 AGACTGGAAAAGGAAAGAGTGGA 59.283 43.478 0.00 0.00 0.00 4.02
4210 4955 4.092116 AGACTGGAAAAGGAAAGAGTGG 57.908 45.455 0.00 0.00 0.00 4.00
4211 4956 5.177696 CGTTAGACTGGAAAAGGAAAGAGTG 59.822 44.000 0.00 0.00 0.00 3.51
4216 4966 4.102054 AGGTCGTTAGACTGGAAAAGGAAA 59.898 41.667 0.00 0.00 46.29 3.13
4220 4970 4.628074 TGAAGGTCGTTAGACTGGAAAAG 58.372 43.478 0.00 0.00 46.29 2.27
4250 5000 6.777580 AGTCCTCCTGTGTTTACATGAAAATT 59.222 34.615 0.00 0.00 35.97 1.82
4261 5012 0.765510 GACCCAGTCCTCCTGTGTTT 59.234 55.000 0.00 0.00 39.74 2.83
4264 5015 0.322975 CAAGACCCAGTCCTCCTGTG 59.677 60.000 0.00 0.00 39.74 3.66
4507 5261 1.091771 CATCACTGTCACCGGGATGC 61.092 60.000 6.32 0.00 0.00 3.91
4592 5346 1.477558 CCTTGCTCAAACCTGGTGAGT 60.478 52.381 13.86 0.00 43.71 3.41
4777 5563 2.328819 AGTCATGCAGGAGATTGCTC 57.671 50.000 0.00 0.00 44.38 4.26
4782 5568 0.622136 TGCCAAGTCATGCAGGAGAT 59.378 50.000 0.00 0.00 32.77 2.75
4806 5592 7.547227 AGAGATAATATTTGTTGTGTTTGGCC 58.453 34.615 0.00 0.00 0.00 5.36
4853 5646 1.462283 CAGATGCCGAGATAATTGCCG 59.538 52.381 0.00 0.00 0.00 5.69
4878 5671 2.813179 CGCCGCCTCCTCATTTTCG 61.813 63.158 0.00 0.00 0.00 3.46
4927 5720 3.007398 GGAGACAAGGAGACACACTTCAT 59.993 47.826 0.00 0.00 0.00 2.57
4930 5723 2.683768 AGGAGACAAGGAGACACACTT 58.316 47.619 0.00 0.00 0.00 3.16
4945 5738 1.347707 GGACATGGTCACACAAGGAGA 59.652 52.381 0.00 0.00 33.68 3.71
4946 5739 1.611673 GGGACATGGTCACACAAGGAG 60.612 57.143 0.00 0.00 35.79 3.69
4947 5740 0.400213 GGGACATGGTCACACAAGGA 59.600 55.000 0.00 0.00 35.79 3.36
4948 5741 0.110295 TGGGACATGGTCACACAAGG 59.890 55.000 0.00 0.00 41.38 3.61
4949 5742 1.072173 TCTGGGACATGGTCACACAAG 59.928 52.381 0.00 0.00 41.38 3.16
4950 5743 1.135960 TCTGGGACATGGTCACACAA 58.864 50.000 0.00 0.00 41.38 3.33
4951 5744 1.278985 GATCTGGGACATGGTCACACA 59.721 52.381 0.00 0.00 41.38 3.72
4972 5765 1.215173 TGCAGAATGGTTATCTGGGGG 59.785 52.381 5.76 0.00 43.60 5.40
5009 5804 3.057946 GGAGATCCTGAAACTTTGTGCAC 60.058 47.826 10.75 10.75 0.00 4.57
5072 5869 5.047802 ACGTTCTCTTTTTGCCATTGATCAT 60.048 36.000 0.00 0.00 0.00 2.45
5095 5894 5.514204 CAGATGCCTTTTGATTCAATTCGAC 59.486 40.000 0.00 0.00 0.00 4.20
5132 5932 3.070878 ACCAAGTTTTTACAATGCCTGGG 59.929 43.478 0.00 0.00 0.00 4.45
5187 5989 0.958876 AGGGAAAACAATCGGCGGAC 60.959 55.000 7.21 0.00 0.00 4.79
5195 5997 3.636764 GAGGACAACACAGGGAAAACAAT 59.363 43.478 0.00 0.00 0.00 2.71
5254 6056 2.163815 AGATCTACAGTACCGTGCACAC 59.836 50.000 18.64 7.72 0.00 3.82
5259 6061 1.400846 ACGCAGATCTACAGTACCGTG 59.599 52.381 0.00 0.00 0.00 4.94
5261 6063 2.541178 GGAACGCAGATCTACAGTACCG 60.541 54.545 0.00 0.00 0.00 4.02
5279 6081 0.976641 ATCGAAGACTGCCAGTGGAA 59.023 50.000 15.20 0.00 42.51 3.53
5288 6090 1.265635 CGCCTAGGAGATCGAAGACTG 59.734 57.143 14.75 0.00 42.51 3.51
5304 6106 0.038526 GTACACACAGCAGTACGCCT 60.039 55.000 6.15 0.00 44.04 5.52
5328 6130 7.917505 CCCTTCTATGTATTTCACAAAATCAGC 59.082 37.037 0.00 0.00 41.55 4.26
5338 6140 4.712829 TGTCCGTCCCTTCTATGTATTTCA 59.287 41.667 0.00 0.00 0.00 2.69
5345 6147 2.100197 TGACTGTCCGTCCCTTCTATG 58.900 52.381 5.17 0.00 42.13 2.23
5346 6148 2.526888 TGACTGTCCGTCCCTTCTAT 57.473 50.000 5.17 0.00 42.13 1.98
5351 6153 1.070289 GACTTTTGACTGTCCGTCCCT 59.930 52.381 5.17 0.00 42.13 4.20
5357 6159 1.137513 CCGTCGACTTTTGACTGTCC 58.862 55.000 14.70 0.00 34.17 4.02
5388 6190 1.609208 CACTGCTTAGGTTGCAAGGT 58.391 50.000 0.00 0.00 40.13 3.50
5390 6192 0.242017 GCCACTGCTTAGGTTGCAAG 59.758 55.000 0.00 0.00 40.13 4.01
5391 6193 1.514678 CGCCACTGCTTAGGTTGCAA 61.515 55.000 0.00 0.00 40.13 4.08
5392 6194 1.965930 CGCCACTGCTTAGGTTGCA 60.966 57.895 0.00 0.00 38.81 4.08
5393 6195 2.690778 CCGCCACTGCTTAGGTTGC 61.691 63.158 0.00 0.00 34.43 4.17
5394 6196 0.392998 ATCCGCCACTGCTTAGGTTG 60.393 55.000 0.00 0.00 34.43 3.77
5395 6197 0.107654 GATCCGCCACTGCTTAGGTT 60.108 55.000 0.00 0.00 34.43 3.50
5396 6198 0.978146 AGATCCGCCACTGCTTAGGT 60.978 55.000 0.00 0.00 34.43 3.08
5397 6199 0.531532 CAGATCCGCCACTGCTTAGG 60.532 60.000 0.00 0.00 34.43 2.69
5398 6200 2.983433 CAGATCCGCCACTGCTTAG 58.017 57.895 0.00 0.00 34.43 2.18
5409 6211 0.764890 TTTCCCCTATGGCAGATCCG 59.235 55.000 0.00 0.00 37.80 4.18
5416 6218 1.152673 CCCTGCTTTCCCCTATGGC 60.153 63.158 0.00 0.00 0.00 4.40
5423 6225 2.361737 GGCTGTCCCTGCTTTCCC 60.362 66.667 0.00 0.00 0.00 3.97
5457 6259 4.106925 GGCACCCTGCTCCTGGAG 62.107 72.222 19.55 19.55 44.28 3.86
5490 6292 3.556843 GGAGATTATGAGGCTGGAGCTTC 60.557 52.174 3.88 3.88 45.94 3.86
5491 6293 2.371510 GGAGATTATGAGGCTGGAGCTT 59.628 50.000 0.00 0.00 41.70 3.74
5497 6307 2.434428 GCCATGGAGATTATGAGGCTG 58.566 52.381 18.40 0.00 37.67 4.85
5541 6351 5.727434 TCTTACCCCTTCGAACAGAATAAC 58.273 41.667 0.00 0.00 38.34 1.89
5582 6394 2.293399 GTGAAAAGCCCATCGTCTTGTT 59.707 45.455 0.00 0.00 0.00 2.83
5589 6401 4.003648 AGACTTAAGTGAAAAGCCCATCG 58.996 43.478 14.14 0.00 0.00 3.84
5605 6417 7.984422 ATGTTTGTCATGAATCACAGACTTA 57.016 32.000 15.53 4.84 35.19 2.24
5634 6446 5.146482 TCTTTTAACCGTTCACTTGTTCG 57.854 39.130 0.00 0.00 0.00 3.95
5666 6478 9.807921 CCTCCTTCTTAGTCTTAGATCTTCTAT 57.192 37.037 0.00 0.00 0.00 1.98
5669 6481 7.891498 ACCTCCTTCTTAGTCTTAGATCTTC 57.109 40.000 0.00 0.00 0.00 2.87
5670 6482 9.771140 TTTACCTCCTTCTTAGTCTTAGATCTT 57.229 33.333 0.00 0.00 0.00 2.40
5671 6483 9.771140 TTTTACCTCCTTCTTAGTCTTAGATCT 57.229 33.333 0.00 0.00 0.00 2.75
5673 6485 9.771140 TCTTTTACCTCCTTCTTAGTCTTAGAT 57.229 33.333 0.00 0.00 0.00 1.98
5674 6486 9.771140 ATCTTTTACCTCCTTCTTAGTCTTAGA 57.229 33.333 0.00 0.00 0.00 2.10
5675 6487 9.810545 CATCTTTTACCTCCTTCTTAGTCTTAG 57.189 37.037 0.00 0.00 0.00 2.18
5676 6488 9.543231 TCATCTTTTACCTCCTTCTTAGTCTTA 57.457 33.333 0.00 0.00 0.00 2.10
5677 6489 8.437274 TCATCTTTTACCTCCTTCTTAGTCTT 57.563 34.615 0.00 0.00 0.00 3.01
5678 6490 8.616799 ATCATCTTTTACCTCCTTCTTAGTCT 57.383 34.615 0.00 0.00 0.00 3.24
5683 6495 8.268605 GGAGTAATCATCTTTTACCTCCTTCTT 58.731 37.037 0.00 0.00 31.40 2.52
5684 6496 7.403231 TGGAGTAATCATCTTTTACCTCCTTCT 59.597 37.037 0.00 0.00 33.16 2.85
5685 6497 7.565680 TGGAGTAATCATCTTTTACCTCCTTC 58.434 38.462 0.00 0.00 33.16 3.46
5686 6498 7.366011 CCTGGAGTAATCATCTTTTACCTCCTT 60.366 40.741 0.00 0.00 33.16 3.36
5687 6499 6.100424 CCTGGAGTAATCATCTTTTACCTCCT 59.900 42.308 0.00 0.00 33.16 3.69
5688 6500 6.126739 ACCTGGAGTAATCATCTTTTACCTCC 60.127 42.308 0.00 0.00 32.90 4.30
5689 6501 6.890293 ACCTGGAGTAATCATCTTTTACCTC 58.110 40.000 0.00 0.00 31.31 3.85
5690 6502 6.893020 ACCTGGAGTAATCATCTTTTACCT 57.107 37.500 0.00 0.00 31.31 3.08
5691 6503 9.457436 TTTAACCTGGAGTAATCATCTTTTACC 57.543 33.333 0.00 0.00 31.31 2.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.