Multiple sequence alignment - TraesCS7B01G364900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G364900 chr7B 100.000 3425 0 0 1 3425 628354290 628357714 0.000000e+00 6325.0
1 TraesCS7B01G364900 chr7B 99.618 262 1 0 16 277 99795107 99794846 2.390000e-131 479.0
2 TraesCS7B01G364900 chr7B 98.855 262 3 0 16 277 125247159 125246898 5.180000e-128 468.0
3 TraesCS7B01G364900 chr7B 98.855 262 3 0 16 277 125283214 125282953 5.180000e-128 468.0
4 TraesCS7B01G364900 chr7B 98.473 262 4 0 16 277 125223323 125223062 2.410000e-126 462.0
5 TraesCS7B01G364900 chr7B 87.990 383 28 7 1924 2295 644535033 644534658 1.460000e-118 436.0
6 TraesCS7B01G364900 chr7B 88.000 375 25 9 1924 2286 192092334 192091968 3.160000e-115 425.0
7 TraesCS7B01G364900 chr7B 91.189 227 20 0 1536 1762 434774604 434774830 3.320000e-80 309.0
8 TraesCS7B01G364900 chr7B 84.739 249 30 3 1198 1446 80847969 80847729 3.410000e-60 243.0
9 TraesCS7B01G364900 chr7B 93.421 76 5 0 1086 1161 80848041 80847966 2.790000e-21 113.0
10 TraesCS7B01G364900 chr7A 91.484 2877 140 43 273 3066 660939367 660942221 0.000000e+00 3858.0
11 TraesCS7B01G364900 chr7A 84.407 295 23 6 1054 1347 577697494 577697222 5.630000e-68 268.0
12 TraesCS7B01G364900 chr7A 95.238 126 6 0 3067 3192 692215400 692215275 2.080000e-47 200.0
13 TraesCS7B01G364900 chr7A 94.118 51 3 0 3004 3054 714823589 714823539 1.020000e-10 78.7
14 TraesCS7B01G364900 chr7D 92.416 2690 115 42 401 3055 571812173 571814808 0.000000e+00 3755.0
15 TraesCS7B01G364900 chr7D 90.184 163 10 2 3239 3398 571814820 571814979 1.250000e-49 207.0
16 TraesCS7B01G364900 chr1B 93.165 395 26 1 1536 1930 542691827 542692220 2.290000e-161 579.0
17 TraesCS7B01G364900 chr1B 87.467 383 30 7 1924 2295 542692652 542693027 3.160000e-115 425.0
18 TraesCS7B01G364900 chr1B 85.141 249 29 3 1198 1446 451085237 451084997 7.340000e-62 248.0
19 TraesCS7B01G364900 chr2B 91.667 396 31 2 1536 1930 791363054 791362660 6.460000e-152 547.0
20 TraesCS7B01G364900 chr2B 91.667 396 31 2 1536 1930 791376679 791376285 6.460000e-152 547.0
21 TraesCS7B01G364900 chr2B 89.105 257 28 0 1393 1649 704873005 704873261 1.530000e-83 320.0
22 TraesCS7B01G364900 chr2B 92.273 220 17 0 1537 1756 526417672 526417891 2.570000e-81 313.0
23 TraesCS7B01G364900 chr2B 80.593 371 49 7 1051 1398 704867589 704867959 7.290000e-67 265.0
24 TraesCS7B01G364900 chr2B 88.800 125 4 1 1924 2038 791375853 791375729 9.910000e-31 145.0
25 TraesCS7B01G364900 chr2B 88.000 125 5 1 1924 2038 791362229 791362105 4.610000e-29 139.0
26 TraesCS7B01G364900 chr5A 92.042 377 29 1 1536 1912 598252865 598252490 2.340000e-146 529.0
27 TraesCS7B01G364900 chr5A 98.473 262 2 1 16 277 698856116 698855857 8.660000e-126 460.0
28 TraesCS7B01G364900 chr5A 92.754 138 8 2 3056 3192 688138021 688138157 7.500000e-47 198.0
29 TraesCS7B01G364900 chr5A 88.462 78 9 0 2989 3066 687153786 687153709 1.010000e-15 95.3
30 TraesCS7B01G364900 chr5A 78.912 147 21 9 2909 3051 19273349 19273489 1.310000e-14 91.6
31 TraesCS7B01G364900 chr3B 90.451 377 30 3 1536 1912 744552460 744552090 3.070000e-135 492.0
32 TraesCS7B01G364900 chr3B 87.467 383 30 7 1924 2295 799005015 799004640 3.160000e-115 425.0
33 TraesCS7B01G364900 chr3B 95.238 126 6 0 3067 3192 752375939 752375814 2.080000e-47 200.0
34 TraesCS7B01G364900 chr3B 89.610 154 11 5 3042 3192 672772065 672771914 1.250000e-44 191.0
35 TraesCS7B01G364900 chr4B 98.855 262 3 0 16 277 30593500 30593761 5.180000e-128 468.0
36 TraesCS7B01G364900 chr4B 84.959 246 29 3 1198 1443 624398688 624398925 3.410000e-60 243.0
37 TraesCS7B01G364900 chr4B 84.874 238 28 3 1198 1435 328908684 328908913 2.060000e-57 233.0
38 TraesCS7B01G364900 chr4B 91.139 79 7 0 1083 1161 328908609 328908687 1.300000e-19 108.0
39 TraesCS7B01G364900 chr3A 98.855 262 3 0 16 277 738332242 738331981 5.180000e-128 468.0
40 TraesCS7B01G364900 chr3A 98.846 260 3 0 16 275 691767559 691767300 6.690000e-127 464.0
41 TraesCS7B01G364900 chr3A 95.238 126 6 0 3067 3192 634688588 634688713 2.080000e-47 200.0
42 TraesCS7B01G364900 chr3A 82.979 141 19 3 2907 3046 661929036 661928900 4.640000e-24 122.0
43 TraesCS7B01G364900 chrUn 98.092 262 5 0 16 277 360478886 360479147 1.120000e-124 457.0
44 TraesCS7B01G364900 chrUn 85.223 291 22 4 1054 1344 13751056 13751325 2.600000e-71 279.0
45 TraesCS7B01G364900 chr6A 88.251 383 27 7 1924 2295 479107890 479108265 3.140000e-120 442.0
46 TraesCS7B01G364900 chr6A 85.366 246 28 3 1198 1443 330379060 330379297 7.340000e-62 248.0
47 TraesCS7B01G364900 chr5B 88.251 383 27 7 1924 2295 680713106 680712731 3.140000e-120 442.0
48 TraesCS7B01G364900 chr2A 85.223 291 22 4 1054 1344 177839322 177839591 2.600000e-71 279.0
49 TraesCS7B01G364900 chr2A 94.488 127 7 0 3066 3192 80263486 80263360 2.700000e-46 196.0
50 TraesCS7B01G364900 chr2A 93.182 132 8 1 3061 3192 214445643 214445513 3.490000e-45 193.0
51 TraesCS7B01G364900 chr2A 80.147 136 20 6 2932 3066 682633665 682633536 1.010000e-15 95.3
52 TraesCS7B01G364900 chr5D 94.444 126 7 0 3067 3192 469726682 469726557 9.700000e-46 195.0
53 TraesCS7B01G364900 chr6B 90.411 146 11 3 3047 3192 42601840 42601982 4.510000e-44 189.0
54 TraesCS7B01G364900 chr6B 96.429 84 2 1 1979 2062 50403844 50403926 1.660000e-28 137.0
55 TraesCS7B01G364900 chr1D 88.235 102 12 0 1054 1155 330571997 330571896 4.640000e-24 122.0
56 TraesCS7B01G364900 chr4A 87.640 89 7 4 2975 3062 584717415 584717330 2.170000e-17 100.0
57 TraesCS7B01G364900 chr4D 88.732 71 7 1 2995 3065 15908453 15908384 6.090000e-13 86.1
58 TraesCS7B01G364900 chr3D 81.176 85 13 2 2970 3053 463198465 463198383 7.930000e-07 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G364900 chr7B 628354290 628357714 3424 False 6325 6325 100.0000 1 3425 1 chr7B.!!$F2 3424
1 TraesCS7B01G364900 chr7A 660939367 660942221 2854 False 3858 3858 91.4840 273 3066 1 chr7A.!!$F1 2793
2 TraesCS7B01G364900 chr7D 571812173 571814979 2806 False 1981 3755 91.3000 401 3398 2 chr7D.!!$F1 2997
3 TraesCS7B01G364900 chr1B 542691827 542693027 1200 False 502 579 90.3160 1536 2295 2 chr1B.!!$F1 759
4 TraesCS7B01G364900 chr2B 791375729 791376679 950 True 346 547 90.2335 1536 2038 2 chr2B.!!$R2 502
5 TraesCS7B01G364900 chr2B 791362105 791363054 949 True 343 547 89.8335 1536 2038 2 chr2B.!!$R1 502

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
79 80 0.035915 AGCGGAAGAGGAGAAAAGGC 60.036 55.0 0.00 0.00 0.00 4.35 F
149 150 0.036294 CTTTTCTCCCCGGTCTCCAC 60.036 60.0 0.00 0.00 0.00 4.02 F
226 227 0.102120 CTAGCTAGCACGCAGAAGCT 59.898 55.0 18.83 15.03 46.58 3.74 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1023 1077 1.153289 CGGCAGGGTCTGATCAAGG 60.153 63.158 0.0 0.0 32.44 3.61 R
2138 2664 0.390472 GTTGCCCTGAGGAGAGAACG 60.390 60.000 0.0 0.0 33.47 3.95 R
2566 3104 4.324797 GCAACCAAAACCCCCTACTACTAT 60.325 45.833 0.0 0.0 0.00 2.12 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.584064 CCAGATGTACCTGCCGCA 59.416 61.111 0.00 0.00 32.97 5.69
18 19 1.522355 CCAGATGTACCTGCCGCAG 60.522 63.158 13.82 13.82 32.97 5.18
19 20 1.517361 CAGATGTACCTGCCGCAGA 59.483 57.895 22.35 1.58 32.44 4.26
20 21 0.529337 CAGATGTACCTGCCGCAGAG 60.529 60.000 22.35 13.78 32.44 3.35
21 22 0.684479 AGATGTACCTGCCGCAGAGA 60.684 55.000 22.35 6.02 32.44 3.10
22 23 0.528684 GATGTACCTGCCGCAGAGAC 60.529 60.000 22.35 17.69 32.44 3.36
23 24 2.202623 GTACCTGCCGCAGAGACG 60.203 66.667 22.35 7.37 32.44 4.18
24 25 4.129737 TACCTGCCGCAGAGACGC 62.130 66.667 22.35 0.00 32.44 5.19
27 28 4.731612 CTGCCGCAGAGACGCAGT 62.732 66.667 15.74 0.00 37.19 4.40
40 41 1.788258 ACGCAGTCACAGAGTCAATG 58.212 50.000 0.00 0.00 29.74 2.82
41 42 1.341209 ACGCAGTCACAGAGTCAATGA 59.659 47.619 0.00 0.00 29.74 2.57
42 43 1.991264 CGCAGTCACAGAGTCAATGAG 59.009 52.381 0.00 0.00 0.00 2.90
43 44 2.352127 CGCAGTCACAGAGTCAATGAGA 60.352 50.000 0.00 0.00 0.00 3.27
44 45 3.675502 CGCAGTCACAGAGTCAATGAGAT 60.676 47.826 0.00 0.00 0.00 2.75
45 46 4.252073 GCAGTCACAGAGTCAATGAGATT 58.748 43.478 0.00 0.00 0.00 2.40
46 47 5.414360 GCAGTCACAGAGTCAATGAGATTA 58.586 41.667 0.00 0.00 0.00 1.75
47 48 5.519566 GCAGTCACAGAGTCAATGAGATTAG 59.480 44.000 0.00 0.00 0.00 1.73
48 49 6.626844 GCAGTCACAGAGTCAATGAGATTAGA 60.627 42.308 0.00 0.00 0.00 2.10
49 50 6.751425 CAGTCACAGAGTCAATGAGATTAGAC 59.249 42.308 0.00 0.00 0.00 2.59
50 51 5.741510 GTCACAGAGTCAATGAGATTAGACG 59.258 44.000 0.00 0.00 36.18 4.18
51 52 5.648092 TCACAGAGTCAATGAGATTAGACGA 59.352 40.000 0.00 0.00 36.18 4.20
52 53 6.151144 TCACAGAGTCAATGAGATTAGACGAA 59.849 38.462 0.00 0.00 36.18 3.85
53 54 6.252441 CACAGAGTCAATGAGATTAGACGAAC 59.748 42.308 0.00 0.00 36.18 3.95
54 55 6.071896 ACAGAGTCAATGAGATTAGACGAACA 60.072 38.462 0.00 0.00 36.18 3.18
55 56 6.252441 CAGAGTCAATGAGATTAGACGAACAC 59.748 42.308 0.00 0.00 36.18 3.32
56 57 5.096169 AGTCAATGAGATTAGACGAACACG 58.904 41.667 0.00 0.00 36.18 4.49
57 58 4.857588 GTCAATGAGATTAGACGAACACGT 59.142 41.667 0.00 0.00 43.06 4.49
58 59 6.025896 GTCAATGAGATTAGACGAACACGTA 58.974 40.000 0.00 0.00 40.41 3.57
59 60 6.021626 GTCAATGAGATTAGACGAACACGTAC 60.022 42.308 0.00 0.00 40.41 3.67
60 61 5.556355 ATGAGATTAGACGAACACGTACA 57.444 39.130 0.00 0.00 40.41 2.90
61 62 4.966249 TGAGATTAGACGAACACGTACAG 58.034 43.478 0.00 0.00 40.41 2.74
62 63 3.756069 AGATTAGACGAACACGTACAGC 58.244 45.455 0.00 0.00 40.41 4.40
64 65 0.166597 TAGACGAACACGTACAGCGG 59.833 55.000 0.00 0.00 46.52 5.52
65 66 1.081906 GACGAACACGTACAGCGGA 60.082 57.895 0.00 0.00 46.52 5.54
66 67 0.661187 GACGAACACGTACAGCGGAA 60.661 55.000 0.00 0.00 46.52 4.30
67 68 0.662374 ACGAACACGTACAGCGGAAG 60.662 55.000 0.00 0.00 46.52 3.46
68 69 0.386352 CGAACACGTACAGCGGAAGA 60.386 55.000 0.00 0.00 46.52 2.87
69 70 1.337821 GAACACGTACAGCGGAAGAG 58.662 55.000 0.00 0.00 46.52 2.85
70 71 0.038526 AACACGTACAGCGGAAGAGG 60.039 55.000 0.00 0.00 46.52 3.69
71 72 0.892358 ACACGTACAGCGGAAGAGGA 60.892 55.000 0.00 0.00 46.52 3.71
72 73 0.179161 CACGTACAGCGGAAGAGGAG 60.179 60.000 0.00 0.00 46.52 3.69
73 74 0.322277 ACGTACAGCGGAAGAGGAGA 60.322 55.000 0.00 0.00 46.52 3.71
74 75 0.809385 CGTACAGCGGAAGAGGAGAA 59.191 55.000 0.00 0.00 36.85 2.87
75 76 1.201647 CGTACAGCGGAAGAGGAGAAA 59.798 52.381 0.00 0.00 36.85 2.52
76 77 2.352421 CGTACAGCGGAAGAGGAGAAAA 60.352 50.000 0.00 0.00 36.85 2.29
77 78 2.464157 ACAGCGGAAGAGGAGAAAAG 57.536 50.000 0.00 0.00 0.00 2.27
78 79 1.002544 ACAGCGGAAGAGGAGAAAAGG 59.997 52.381 0.00 0.00 0.00 3.11
79 80 0.035915 AGCGGAAGAGGAGAAAAGGC 60.036 55.000 0.00 0.00 0.00 4.35
80 81 0.321653 GCGGAAGAGGAGAAAAGGCA 60.322 55.000 0.00 0.00 0.00 4.75
81 82 1.731720 CGGAAGAGGAGAAAAGGCAG 58.268 55.000 0.00 0.00 0.00 4.85
82 83 1.677217 CGGAAGAGGAGAAAAGGCAGG 60.677 57.143 0.00 0.00 0.00 4.85
83 84 1.340502 GGAAGAGGAGAAAAGGCAGGG 60.341 57.143 0.00 0.00 0.00 4.45
84 85 1.630878 GAAGAGGAGAAAAGGCAGGGA 59.369 52.381 0.00 0.00 0.00 4.20
85 86 1.747444 AGAGGAGAAAAGGCAGGGAA 58.253 50.000 0.00 0.00 0.00 3.97
86 87 1.352687 AGAGGAGAAAAGGCAGGGAAC 59.647 52.381 0.00 0.00 0.00 3.62
87 88 0.036875 AGGAGAAAAGGCAGGGAACG 59.963 55.000 0.00 0.00 0.00 3.95
88 89 0.960861 GGAGAAAAGGCAGGGAACGG 60.961 60.000 0.00 0.00 0.00 4.44
96 97 3.781307 CAGGGAACGGCCGATCCA 61.781 66.667 43.27 0.00 38.62 3.41
97 98 3.006728 AGGGAACGGCCGATCCAA 61.007 61.111 43.27 0.00 38.62 3.53
98 99 2.192175 GGGAACGGCCGATCCAAT 59.808 61.111 43.27 17.08 38.62 3.16
99 100 1.892391 GGGAACGGCCGATCCAATC 60.892 63.158 43.27 28.57 38.62 2.67
100 101 1.892391 GGAACGGCCGATCCAATCC 60.892 63.158 40.28 26.65 37.09 3.01
101 102 1.153249 GAACGGCCGATCCAATCCA 60.153 57.895 35.90 0.00 34.01 3.41
102 103 0.746563 GAACGGCCGATCCAATCCAA 60.747 55.000 35.90 0.00 34.01 3.53
103 104 0.322997 AACGGCCGATCCAATCCAAA 60.323 50.000 35.90 0.00 34.01 3.28
104 105 0.748005 ACGGCCGATCCAATCCAAAG 60.748 55.000 35.90 0.00 34.01 2.77
105 106 0.748005 CGGCCGATCCAATCCAAAGT 60.748 55.000 24.07 0.00 34.01 2.66
106 107 1.474330 GGCCGATCCAATCCAAAGTT 58.526 50.000 0.00 0.00 34.01 2.66
107 108 2.650322 GGCCGATCCAATCCAAAGTTA 58.350 47.619 0.00 0.00 34.01 2.24
108 109 2.357952 GGCCGATCCAATCCAAAGTTAC 59.642 50.000 0.00 0.00 34.01 2.50
109 110 3.013921 GCCGATCCAATCCAAAGTTACA 58.986 45.455 0.00 0.00 0.00 2.41
110 111 3.065371 GCCGATCCAATCCAAAGTTACAG 59.935 47.826 0.00 0.00 0.00 2.74
111 112 4.513442 CCGATCCAATCCAAAGTTACAGA 58.487 43.478 0.00 0.00 0.00 3.41
112 113 4.941263 CCGATCCAATCCAAAGTTACAGAA 59.059 41.667 0.00 0.00 0.00 3.02
113 114 5.414454 CCGATCCAATCCAAAGTTACAGAAA 59.586 40.000 0.00 0.00 0.00 2.52
114 115 6.072175 CCGATCCAATCCAAAGTTACAGAAAA 60.072 38.462 0.00 0.00 0.00 2.29
115 116 7.362920 CCGATCCAATCCAAAGTTACAGAAAAT 60.363 37.037 0.00 0.00 0.00 1.82
116 117 7.698130 CGATCCAATCCAAAGTTACAGAAAATC 59.302 37.037 0.00 0.00 0.00 2.17
117 118 7.831691 TCCAATCCAAAGTTACAGAAAATCA 57.168 32.000 0.00 0.00 0.00 2.57
118 119 8.243961 TCCAATCCAAAGTTACAGAAAATCAA 57.756 30.769 0.00 0.00 0.00 2.57
119 120 8.869109 TCCAATCCAAAGTTACAGAAAATCAAT 58.131 29.630 0.00 0.00 0.00 2.57
120 121 8.928733 CCAATCCAAAGTTACAGAAAATCAATG 58.071 33.333 0.00 0.00 0.00 2.82
121 122 8.928733 CAATCCAAAGTTACAGAAAATCAATGG 58.071 33.333 0.00 0.00 0.00 3.16
122 123 7.831691 TCCAAAGTTACAGAAAATCAATGGA 57.168 32.000 0.00 0.00 0.00 3.41
123 124 8.243961 TCCAAAGTTACAGAAAATCAATGGAA 57.756 30.769 0.00 0.00 0.00 3.53
124 125 8.141268 TCCAAAGTTACAGAAAATCAATGGAAC 58.859 33.333 0.00 0.00 37.92 3.62
125 126 7.114811 CCAAAGTTACAGAAAATCAATGGAACG 59.885 37.037 0.00 0.00 41.67 3.95
126 127 7.504924 AAGTTACAGAAAATCAATGGAACGA 57.495 32.000 0.00 0.00 41.67 3.85
127 128 7.687941 AGTTACAGAAAATCAATGGAACGAT 57.312 32.000 0.00 0.00 41.67 3.73
128 129 8.110860 AGTTACAGAAAATCAATGGAACGATT 57.889 30.769 0.00 0.00 41.67 3.34
129 130 8.237267 AGTTACAGAAAATCAATGGAACGATTC 58.763 33.333 0.00 0.00 41.67 2.52
140 141 2.366533 GGAACGATTCCTTTTCTCCCC 58.633 52.381 8.87 0.00 46.57 4.81
141 142 2.007608 GAACGATTCCTTTTCTCCCCG 58.992 52.381 0.00 0.00 0.00 5.73
142 143 0.252197 ACGATTCCTTTTCTCCCCGG 59.748 55.000 0.00 0.00 0.00 5.73
143 144 0.252197 CGATTCCTTTTCTCCCCGGT 59.748 55.000 0.00 0.00 0.00 5.28
144 145 1.742750 CGATTCCTTTTCTCCCCGGTC 60.743 57.143 0.00 0.00 0.00 4.79
145 146 1.560146 GATTCCTTTTCTCCCCGGTCT 59.440 52.381 0.00 0.00 0.00 3.85
146 147 0.981943 TTCCTTTTCTCCCCGGTCTC 59.018 55.000 0.00 0.00 0.00 3.36
147 148 0.908180 TCCTTTTCTCCCCGGTCTCC 60.908 60.000 0.00 0.00 0.00 3.71
148 149 1.198759 CCTTTTCTCCCCGGTCTCCA 61.199 60.000 0.00 0.00 0.00 3.86
149 150 0.036294 CTTTTCTCCCCGGTCTCCAC 60.036 60.000 0.00 0.00 0.00 4.02
150 151 1.823169 TTTTCTCCCCGGTCTCCACG 61.823 60.000 0.00 0.00 0.00 4.94
151 152 3.518552 TTCTCCCCGGTCTCCACGT 62.519 63.158 0.00 0.00 0.00 4.49
152 153 3.760035 CTCCCCGGTCTCCACGTG 61.760 72.222 9.08 9.08 0.00 4.49
153 154 4.289101 TCCCCGGTCTCCACGTGA 62.289 66.667 19.30 2.03 0.00 4.35
154 155 4.065281 CCCCGGTCTCCACGTGAC 62.065 72.222 19.30 7.28 0.00 3.67
161 162 1.992170 GTCTCCACGTGACCATGTAC 58.008 55.000 19.30 1.40 0.00 2.90
162 163 0.524414 TCTCCACGTGACCATGTACG 59.476 55.000 19.30 11.35 45.19 3.67
166 167 3.069216 CGTGACCATGTACGTGCG 58.931 61.111 9.72 4.13 35.70 5.34
167 168 1.443025 CGTGACCATGTACGTGCGA 60.443 57.895 9.72 0.00 35.70 5.10
168 169 1.004785 CGTGACCATGTACGTGCGAA 61.005 55.000 9.72 0.00 35.70 4.70
169 170 1.355971 GTGACCATGTACGTGCGAAT 58.644 50.000 9.72 0.00 0.00 3.34
170 171 2.532235 GTGACCATGTACGTGCGAATA 58.468 47.619 9.72 0.00 0.00 1.75
171 172 3.120792 GTGACCATGTACGTGCGAATAT 58.879 45.455 9.72 0.00 0.00 1.28
172 173 3.060540 GTGACCATGTACGTGCGAATATG 60.061 47.826 9.72 0.00 0.00 1.78
173 174 2.475111 GACCATGTACGTGCGAATATGG 59.525 50.000 15.95 15.95 40.59 2.74
174 175 1.798223 CCATGTACGTGCGAATATGGG 59.202 52.381 9.72 0.00 33.22 4.00
175 176 1.194547 CATGTACGTGCGAATATGGGC 59.805 52.381 1.29 0.00 0.00 5.36
176 177 0.531090 TGTACGTGCGAATATGGGCC 60.531 55.000 0.00 0.00 0.00 5.80
177 178 0.531090 GTACGTGCGAATATGGGCCA 60.531 55.000 9.61 9.61 0.00 5.36
178 179 0.249699 TACGTGCGAATATGGGCCAG 60.250 55.000 13.78 0.00 0.00 4.85
179 180 2.253758 CGTGCGAATATGGGCCAGG 61.254 63.158 13.78 0.00 0.00 4.45
180 181 2.203337 TGCGAATATGGGCCAGGC 60.203 61.111 13.78 1.26 0.00 4.85
190 191 3.076916 GGCCAGGCCCACCAAATC 61.077 66.667 21.62 0.00 44.06 2.17
191 192 2.037847 GCCAGGCCCACCAAATCT 59.962 61.111 0.00 0.00 39.06 2.40
192 193 2.353610 GCCAGGCCCACCAAATCTG 61.354 63.158 0.00 0.00 39.06 2.90
193 194 1.077265 CCAGGCCCACCAAATCTGT 59.923 57.895 0.00 0.00 39.06 3.41
194 195 0.542702 CCAGGCCCACCAAATCTGTT 60.543 55.000 0.00 0.00 39.06 3.16
195 196 1.341080 CAGGCCCACCAAATCTGTTT 58.659 50.000 0.00 0.00 39.06 2.83
196 197 2.524306 CAGGCCCACCAAATCTGTTTA 58.476 47.619 0.00 0.00 39.06 2.01
197 198 2.231235 CAGGCCCACCAAATCTGTTTAC 59.769 50.000 0.00 0.00 39.06 2.01
198 199 2.110011 AGGCCCACCAAATCTGTTTACT 59.890 45.455 0.00 0.00 39.06 2.24
199 200 2.897326 GGCCCACCAAATCTGTTTACTT 59.103 45.455 0.00 0.00 35.26 2.24
200 201 3.323691 GGCCCACCAAATCTGTTTACTTT 59.676 43.478 0.00 0.00 35.26 2.66
201 202 4.202315 GGCCCACCAAATCTGTTTACTTTT 60.202 41.667 0.00 0.00 35.26 2.27
202 203 4.988540 GCCCACCAAATCTGTTTACTTTTC 59.011 41.667 0.00 0.00 0.00 2.29
203 204 5.221441 GCCCACCAAATCTGTTTACTTTTCT 60.221 40.000 0.00 0.00 0.00 2.52
204 205 6.015772 GCCCACCAAATCTGTTTACTTTTCTA 60.016 38.462 0.00 0.00 0.00 2.10
205 206 7.309805 GCCCACCAAATCTGTTTACTTTTCTAT 60.310 37.037 0.00 0.00 0.00 1.98
206 207 8.028938 CCCACCAAATCTGTTTACTTTTCTATG 58.971 37.037 0.00 0.00 0.00 2.23
207 208 7.542130 CCACCAAATCTGTTTACTTTTCTATGC 59.458 37.037 0.00 0.00 0.00 3.14
208 209 8.299570 CACCAAATCTGTTTACTTTTCTATGCT 58.700 33.333 0.00 0.00 0.00 3.79
209 210 9.515226 ACCAAATCTGTTTACTTTTCTATGCTA 57.485 29.630 0.00 0.00 0.00 3.49
210 211 9.994432 CCAAATCTGTTTACTTTTCTATGCTAG 57.006 33.333 0.00 0.00 0.00 3.42
211 212 9.495754 CAAATCTGTTTACTTTTCTATGCTAGC 57.504 33.333 8.10 8.10 0.00 3.42
212 213 9.454859 AAATCTGTTTACTTTTCTATGCTAGCT 57.545 29.630 17.23 4.07 0.00 3.32
214 215 9.757227 ATCTGTTTACTTTTCTATGCTAGCTAG 57.243 33.333 16.84 16.84 0.00 3.42
225 226 2.587574 CTAGCTAGCACGCAGAAGC 58.412 57.895 18.83 3.64 35.16 3.86
226 227 0.102120 CTAGCTAGCACGCAGAAGCT 59.898 55.000 18.83 15.03 46.58 3.74
227 228 0.179127 TAGCTAGCACGCAGAAGCTG 60.179 55.000 18.83 0.00 44.70 4.24
228 229 1.446792 GCTAGCACGCAGAAGCTGA 60.447 57.895 10.63 0.00 41.59 4.26
229 230 1.419874 GCTAGCACGCAGAAGCTGAG 61.420 60.000 10.63 0.00 41.59 3.35
230 231 1.419874 CTAGCACGCAGAAGCTGAGC 61.420 60.000 0.00 0.00 41.59 4.26
235 236 3.194308 GCAGAAGCTGAGCGAGGC 61.194 66.667 0.00 0.00 37.91 4.70
236 237 2.884685 CAGAAGCTGAGCGAGGCG 60.885 66.667 0.00 0.00 32.44 5.52
247 248 2.202743 CGAGGCGCCGAGATTTGA 60.203 61.111 23.20 0.00 0.00 2.69
248 249 1.592669 CGAGGCGCCGAGATTTGAT 60.593 57.895 23.20 0.00 0.00 2.57
249 250 1.552348 CGAGGCGCCGAGATTTGATC 61.552 60.000 23.20 8.75 0.00 2.92
250 251 0.530650 GAGGCGCCGAGATTTGATCA 60.531 55.000 23.20 0.00 0.00 2.92
251 252 0.107703 AGGCGCCGAGATTTGATCAA 60.108 50.000 23.20 3.38 0.00 2.57
252 253 0.732571 GGCGCCGAGATTTGATCAAA 59.267 50.000 22.52 22.52 34.46 2.69
253 254 1.132262 GGCGCCGAGATTTGATCAAAA 59.868 47.619 23.91 8.65 33.56 2.44
254 255 2.223572 GGCGCCGAGATTTGATCAAAAT 60.224 45.455 23.91 15.70 41.33 1.82
255 256 3.003275 GGCGCCGAGATTTGATCAAAATA 59.997 43.478 23.91 2.66 38.64 1.40
256 257 4.497340 GGCGCCGAGATTTGATCAAAATAA 60.497 41.667 23.91 2.26 38.64 1.40
257 258 5.034152 GCGCCGAGATTTGATCAAAATAAA 58.966 37.500 23.91 1.86 38.64 1.40
258 259 5.514914 GCGCCGAGATTTGATCAAAATAAAA 59.485 36.000 23.91 1.07 38.64 1.52
259 260 6.034470 GCGCCGAGATTTGATCAAAATAAAAA 59.966 34.615 23.91 0.30 38.64 1.94
308 309 2.516460 GCTCGCCGAGTCCCTAGA 60.516 66.667 16.50 0.00 31.39 2.43
320 324 0.841961 TCCCTAGACGGCTGTAGCTA 59.158 55.000 0.00 0.00 41.70 3.32
344 348 3.651803 TGAAAAATGCGGGAATTCGTT 57.348 38.095 0.00 0.00 0.00 3.85
346 350 2.362169 AAAATGCGGGAATTCGTTGG 57.638 45.000 0.00 0.00 0.00 3.77
347 351 0.108851 AAATGCGGGAATTCGTTGGC 60.109 50.000 0.00 0.88 0.00 4.52
364 368 0.826715 GGCTGCTCTGGTCTGTGATA 59.173 55.000 0.00 0.00 0.00 2.15
376 380 1.824852 TCTGTGATAGCGAAAGGAGCA 59.175 47.619 0.00 0.00 37.01 4.26
391 395 1.663135 GGAGCAATTCTTCTCGTCTGC 59.337 52.381 0.00 0.00 0.00 4.26
420 424 1.132643 GTCTTGAGGAGATACGTGCGT 59.867 52.381 0.00 2.05 36.61 5.24
421 425 1.132453 TCTTGAGGAGATACGTGCGTG 59.868 52.381 7.55 0.00 0.00 5.34
422 426 0.457853 TTGAGGAGATACGTGCGTGC 60.458 55.000 7.55 0.00 0.00 5.34
423 427 1.939785 GAGGAGATACGTGCGTGCG 60.940 63.158 7.55 0.00 37.94 5.34
425 429 2.505498 GGAGATACGTGCGTGCGTG 61.505 63.158 14.68 0.00 45.33 5.34
426 430 1.800315 GAGATACGTGCGTGCGTGT 60.800 57.895 14.68 9.24 45.33 4.49
427 431 1.998550 GAGATACGTGCGTGCGTGTG 61.999 60.000 14.68 0.00 45.33 3.82
450 454 2.098607 TGTGGATTACTAGTTCGAGGCG 59.901 50.000 0.00 0.00 0.00 5.52
462 466 4.404654 GAGGCGCGCAACTTTGGG 62.405 66.667 34.42 1.77 43.22 4.12
470 474 1.300620 GCAACTTTGGGCCGAAACC 60.301 57.895 9.10 0.00 0.00 3.27
535 542 3.056821 CCTTTAAGCCTAACCCAAAGCAC 60.057 47.826 0.00 0.00 0.00 4.40
578 593 0.238289 CAAGACGCACACATTGGTCC 59.762 55.000 0.00 0.00 0.00 4.46
589 604 4.339247 CACACATTGGTCCCTGATTATTCC 59.661 45.833 0.00 0.00 0.00 3.01
590 605 4.017591 ACACATTGGTCCCTGATTATTCCA 60.018 41.667 0.00 0.00 0.00 3.53
595 610 4.111577 TGGTCCCTGATTATTCCAAGTCT 58.888 43.478 0.00 0.00 0.00 3.24
617 632 1.002134 CACCACACCAGGGACCATC 60.002 63.158 0.00 0.00 0.00 3.51
618 633 1.151810 ACCACACCAGGGACCATCT 60.152 57.895 0.00 0.00 0.00 2.90
658 674 4.443621 AGCTCCGGATTAGTAAGCTTTTC 58.556 43.478 3.57 0.00 40.26 2.29
659 675 3.245519 GCTCCGGATTAGTAAGCTTTTCG 59.754 47.826 3.57 0.00 0.00 3.46
660 676 3.788937 TCCGGATTAGTAAGCTTTTCGG 58.211 45.455 3.20 6.35 0.00 4.30
662 678 4.402155 TCCGGATTAGTAAGCTTTTCGGTA 59.598 41.667 13.27 0.28 0.00 4.02
791 837 3.391631 CGCGCTGTGAACGAACGA 61.392 61.111 5.56 0.00 0.00 3.85
826 872 1.740296 GCCGCTAACCGAAGCAGAA 60.740 57.895 5.45 0.00 42.91 3.02
911 962 1.379977 CTCTGTCACTCCCGGCCTA 60.380 63.158 0.00 0.00 0.00 3.93
939 990 2.014554 CGTTCCCAGTCACGACACG 61.015 63.158 0.00 0.00 38.76 4.49
941 992 3.509137 TTCCCAGTCACGACACGCC 62.509 63.158 0.00 0.00 0.00 5.68
986 1040 1.069906 CAAGACCGAAAACCAAGAGCG 60.070 52.381 0.00 0.00 0.00 5.03
1116 1182 1.546961 TCCTCGAGTCCAACTTCCTC 58.453 55.000 12.31 0.00 0.00 3.71
1407 1473 3.423154 CGCAAGGTGTTCTCCGGC 61.423 66.667 0.00 0.00 0.00 6.13
1524 1590 2.584064 CCCTGCTACGACATGGCA 59.416 61.111 0.00 0.00 43.58 4.92
1644 1710 4.021925 GCAGAGGTGGCGTCCCTT 62.022 66.667 0.00 0.00 30.60 3.95
1934 2438 2.193447 CACGGACAGAATCGTACCATG 58.807 52.381 0.00 0.00 37.88 3.66
2046 2560 5.473504 ACATCCGCATCCAGGTAAATAATTC 59.526 40.000 0.00 0.00 0.00 2.17
2047 2561 5.304686 TCCGCATCCAGGTAAATAATTCT 57.695 39.130 0.00 0.00 0.00 2.40
2049 2563 5.071788 TCCGCATCCAGGTAAATAATTCTCT 59.928 40.000 0.00 0.00 0.00 3.10
2090 2614 9.573133 ACAATTTCACAGCTGCTTAATTATTAC 57.427 29.630 15.27 0.00 0.00 1.89
2092 2616 9.793252 AATTTCACAGCTGCTTAATTATTACTG 57.207 29.630 15.27 0.00 0.00 2.74
2093 2617 7.921786 TTCACAGCTGCTTAATTATTACTGT 57.078 32.000 15.27 0.00 37.60 3.55
2094 2618 7.921786 TCACAGCTGCTTAATTATTACTGTT 57.078 32.000 15.27 0.00 35.06 3.16
2138 2664 1.200948 GAAGCTGACTGTCCCAATTGC 59.799 52.381 5.17 0.88 0.00 3.56
2158 2684 0.687354 GTTCTCTCCTCAGGGCAACA 59.313 55.000 0.00 0.00 39.74 3.33
2169 2695 2.100216 GGCAACAGCATTACCGCG 59.900 61.111 0.00 0.00 36.85 6.46
2430 2956 3.760035 GAGTCGCCCTGAGCCGAA 61.760 66.667 0.00 0.00 38.78 4.30
2705 3256 5.665459 TGTGAAAGATTTCTCTAGCTAGGC 58.335 41.667 20.58 4.15 38.02 3.93
2854 3407 6.596703 CAGTGATAACTATCATGCGATTTGG 58.403 40.000 2.85 0.00 43.82 3.28
2877 3430 4.611581 GCAAAGGATCGTCTCAAACTTCAC 60.612 45.833 0.00 0.00 0.00 3.18
2919 3472 1.137282 GCTCTAAGGGTGTGGCTAGAC 59.863 57.143 0.00 0.00 0.00 2.59
2925 3478 0.912486 GGGTGTGGCTAGACCTCAAT 59.088 55.000 16.19 0.00 43.38 2.57
2930 3483 2.362397 TGTGGCTAGACCTCAATCGATC 59.638 50.000 0.00 0.00 38.97 3.69
2935 3488 3.251245 GCTAGACCTCAATCGATCGAGAA 59.749 47.826 23.84 10.02 0.00 2.87
2943 3496 5.928839 CCTCAATCGATCGAGAATTAACCAT 59.071 40.000 23.84 0.00 0.00 3.55
2955 3508 8.092068 TCGAGAATTAACCATGTCTTAGTCAAA 58.908 33.333 0.00 0.00 0.00 2.69
2959 3512 9.774742 GAATTAACCATGTCTTAGTCAAATGAC 57.225 33.333 5.40 5.40 45.08 3.06
3016 3572 5.351465 TGAAAACTTTGCACGGATCTCTATC 59.649 40.000 0.00 0.00 0.00 2.08
3020 3576 5.837437 ACTTTGCACGGATCTCTATCTAAG 58.163 41.667 0.00 0.00 32.29 2.18
3056 3612 2.610479 GCATCGACTGAGACTTGGTTGA 60.610 50.000 0.00 2.53 0.00 3.18
3067 3623 4.329462 GACTTGGTTGAGTCTCAGTCTT 57.671 45.455 2.12 0.00 42.18 3.01
3068 3624 4.698575 GACTTGGTTGAGTCTCAGTCTTT 58.301 43.478 2.12 0.00 42.18 2.52
3069 3625 5.104259 ACTTGGTTGAGTCTCAGTCTTTT 57.896 39.130 2.12 0.00 0.00 2.27
3070 3626 5.501156 ACTTGGTTGAGTCTCAGTCTTTTT 58.499 37.500 2.12 0.00 0.00 1.94
3093 3649 6.911250 TTTTTAGAAAAGAAGGATGACCCC 57.089 37.500 0.00 0.00 36.73 4.95
3094 3650 4.586306 TTAGAAAAGAAGGATGACCCCC 57.414 45.455 0.00 0.00 36.73 5.40
3095 3651 1.282157 AGAAAAGAAGGATGACCCCCG 59.718 52.381 0.00 0.00 36.73 5.73
3096 3652 0.331616 AAAAGAAGGATGACCCCCGG 59.668 55.000 0.00 0.00 36.73 5.73
3097 3653 2.211468 AAAGAAGGATGACCCCCGGC 62.211 60.000 0.00 0.00 36.73 6.13
3098 3654 4.191015 GAAGGATGACCCCCGGCC 62.191 72.222 0.00 0.00 36.73 6.13
3099 3655 4.760220 AAGGATGACCCCCGGCCT 62.760 66.667 0.00 0.00 36.73 5.19
3102 3658 3.866582 GATGACCCCCGGCCTCTG 61.867 72.222 0.00 0.00 0.00 3.35
3108 3664 4.559063 CCCCGGCCTCTGCATCTG 62.559 72.222 0.00 0.00 40.13 2.90
3109 3665 4.559063 CCCGGCCTCTGCATCTGG 62.559 72.222 0.00 0.00 40.13 3.86
3110 3666 4.559063 CCGGCCTCTGCATCTGGG 62.559 72.222 0.00 0.00 40.13 4.45
3111 3667 3.473647 CGGCCTCTGCATCTGGGA 61.474 66.667 0.00 0.00 40.13 4.37
3112 3668 2.509916 GGCCTCTGCATCTGGGAG 59.490 66.667 0.00 0.00 40.13 4.30
3113 3669 2.068821 GGCCTCTGCATCTGGGAGA 61.069 63.158 0.00 0.00 42.24 3.71
3114 3670 1.417288 GGCCTCTGCATCTGGGAGAT 61.417 60.000 0.00 0.00 43.58 2.75
3122 3678 2.090400 CATCTGGGAGATGTATGCGG 57.910 55.000 5.55 0.00 45.33 5.69
3123 3679 0.322975 ATCTGGGAGATGTATGCGGC 59.677 55.000 0.00 0.00 32.80 6.53
3124 3680 1.302033 CTGGGAGATGTATGCGGCC 60.302 63.158 0.00 0.00 0.00 6.13
3125 3681 2.043604 CTGGGAGATGTATGCGGCCA 62.044 60.000 2.24 0.00 0.00 5.36
3126 3682 1.376466 GGGAGATGTATGCGGCCAT 59.624 57.895 2.24 0.00 35.44 4.40
3127 3683 0.250901 GGGAGATGTATGCGGCCATT 60.251 55.000 2.24 0.00 32.85 3.16
3128 3684 1.609208 GGAGATGTATGCGGCCATTT 58.391 50.000 2.24 0.00 32.85 2.32
3129 3685 1.956477 GGAGATGTATGCGGCCATTTT 59.044 47.619 2.24 0.00 32.85 1.82
3130 3686 3.146066 GGAGATGTATGCGGCCATTTTA 58.854 45.455 2.24 0.00 32.85 1.52
3131 3687 3.758554 GGAGATGTATGCGGCCATTTTAT 59.241 43.478 2.24 0.00 32.85 1.40
3132 3688 4.218417 GGAGATGTATGCGGCCATTTTATT 59.782 41.667 2.24 0.00 32.85 1.40
3133 3689 5.125100 AGATGTATGCGGCCATTTTATTG 57.875 39.130 2.24 0.00 32.85 1.90
3134 3690 4.826733 AGATGTATGCGGCCATTTTATTGA 59.173 37.500 2.24 0.00 32.85 2.57
3135 3691 5.477984 AGATGTATGCGGCCATTTTATTGAT 59.522 36.000 2.24 0.00 32.85 2.57
3136 3692 5.528043 TGTATGCGGCCATTTTATTGATT 57.472 34.783 2.24 0.00 32.85 2.57
3137 3693 6.641169 TGTATGCGGCCATTTTATTGATTA 57.359 33.333 2.24 0.00 32.85 1.75
3138 3694 7.225784 TGTATGCGGCCATTTTATTGATTAT 57.774 32.000 2.24 0.00 32.85 1.28
3139 3695 7.665690 TGTATGCGGCCATTTTATTGATTATT 58.334 30.769 2.24 0.00 32.85 1.40
3140 3696 7.812191 TGTATGCGGCCATTTTATTGATTATTC 59.188 33.333 2.24 0.00 32.85 1.75
3141 3697 6.403866 TGCGGCCATTTTATTGATTATTCT 57.596 33.333 2.24 0.00 0.00 2.40
3142 3698 6.446318 TGCGGCCATTTTATTGATTATTCTC 58.554 36.000 2.24 0.00 0.00 2.87
3143 3699 5.569059 GCGGCCATTTTATTGATTATTCTCG 59.431 40.000 2.24 0.00 0.00 4.04
3144 3700 6.567701 GCGGCCATTTTATTGATTATTCTCGA 60.568 38.462 2.24 0.00 0.00 4.04
3145 3701 7.530010 CGGCCATTTTATTGATTATTCTCGAT 58.470 34.615 2.24 0.00 0.00 3.59
3146 3702 7.482743 CGGCCATTTTATTGATTATTCTCGATG 59.517 37.037 2.24 0.00 0.00 3.84
3147 3703 8.514594 GGCCATTTTATTGATTATTCTCGATGA 58.485 33.333 0.00 0.00 0.00 2.92
3148 3704 9.334693 GCCATTTTATTGATTATTCTCGATGAC 57.665 33.333 0.00 0.00 0.00 3.06
3149 3705 9.831737 CCATTTTATTGATTATTCTCGATGACC 57.168 33.333 0.00 0.00 0.00 4.02
3156 3712 9.613428 ATTGATTATTCTCGATGACCTTACAAA 57.387 29.630 0.00 0.00 0.00 2.83
3157 3713 8.648557 TGATTATTCTCGATGACCTTACAAAG 57.351 34.615 0.00 0.00 0.00 2.77
3158 3714 8.258007 TGATTATTCTCGATGACCTTACAAAGT 58.742 33.333 0.00 0.00 0.00 2.66
3159 3715 9.745880 GATTATTCTCGATGACCTTACAAAGTA 57.254 33.333 0.00 0.00 0.00 2.24
3184 3740 8.668510 ATTATATCAATATGTCTGAATCCGCC 57.331 34.615 0.00 0.00 0.00 6.13
3185 3741 3.836365 TCAATATGTCTGAATCCGCCA 57.164 42.857 0.00 0.00 0.00 5.69
3186 3742 4.356405 TCAATATGTCTGAATCCGCCAT 57.644 40.909 0.00 0.00 0.00 4.40
3187 3743 4.318332 TCAATATGTCTGAATCCGCCATC 58.682 43.478 0.00 0.00 0.00 3.51
3188 3744 4.040829 TCAATATGTCTGAATCCGCCATCT 59.959 41.667 0.00 0.00 0.00 2.90
3189 3745 4.630644 ATATGTCTGAATCCGCCATCTT 57.369 40.909 0.00 0.00 0.00 2.40
3190 3746 2.028420 TGTCTGAATCCGCCATCTTG 57.972 50.000 0.00 0.00 0.00 3.02
3191 3747 1.303309 GTCTGAATCCGCCATCTTGG 58.697 55.000 0.00 0.00 41.55 3.61
3192 3748 0.911769 TCTGAATCCGCCATCTTGGT 59.088 50.000 0.00 0.00 40.46 3.67
3193 3749 1.281867 TCTGAATCCGCCATCTTGGTT 59.718 47.619 0.00 0.00 40.46 3.67
3194 3750 1.402968 CTGAATCCGCCATCTTGGTTG 59.597 52.381 0.00 0.00 40.46 3.77
3195 3751 1.004161 TGAATCCGCCATCTTGGTTGA 59.996 47.619 0.00 0.00 40.46 3.18
3196 3752 1.672881 GAATCCGCCATCTTGGTTGAG 59.327 52.381 0.00 0.00 40.46 3.02
3197 3753 0.620556 ATCCGCCATCTTGGTTGAGT 59.379 50.000 0.00 0.00 40.46 3.41
3198 3754 0.036388 TCCGCCATCTTGGTTGAGTC 60.036 55.000 0.00 0.00 40.46 3.36
3199 3755 0.036010 CCGCCATCTTGGTTGAGTCT 60.036 55.000 0.00 0.00 40.46 3.24
3200 3756 1.363744 CGCCATCTTGGTTGAGTCTC 58.636 55.000 0.00 0.00 40.46 3.36
3201 3757 1.338105 CGCCATCTTGGTTGAGTCTCA 60.338 52.381 0.00 0.00 40.46 3.27
3202 3758 2.354259 GCCATCTTGGTTGAGTCTCAG 58.646 52.381 2.12 0.00 40.46 3.35
3203 3759 2.289945 GCCATCTTGGTTGAGTCTCAGT 60.290 50.000 2.12 0.00 40.46 3.41
3204 3760 3.594134 CCATCTTGGTTGAGTCTCAGTC 58.406 50.000 2.12 1.04 31.35 3.51
3205 3761 3.007290 CCATCTTGGTTGAGTCTCAGTCA 59.993 47.826 2.12 3.15 31.35 3.41
3206 3762 4.503817 CCATCTTGGTTGAGTCTCAGTCAA 60.504 45.833 14.92 14.92 35.34 3.18
3207 3763 4.753516 TCTTGGTTGAGTCTCAGTCAAA 57.246 40.909 15.90 8.27 39.07 2.69
3208 3764 5.097742 TCTTGGTTGAGTCTCAGTCAAAA 57.902 39.130 15.90 5.68 39.07 2.44
3209 3765 5.118990 TCTTGGTTGAGTCTCAGTCAAAAG 58.881 41.667 15.90 13.41 39.07 2.27
3210 3766 4.487714 TGGTTGAGTCTCAGTCAAAAGT 57.512 40.909 2.12 0.00 39.07 2.66
3211 3767 4.442706 TGGTTGAGTCTCAGTCAAAAGTC 58.557 43.478 2.12 0.00 39.07 3.01
3212 3768 3.810386 GGTTGAGTCTCAGTCAAAAGTCC 59.190 47.826 2.12 0.00 39.07 3.85
3213 3769 4.443598 GGTTGAGTCTCAGTCAAAAGTCCT 60.444 45.833 2.12 0.00 39.07 3.85
3214 3770 5.221461 GGTTGAGTCTCAGTCAAAAGTCCTA 60.221 44.000 2.12 0.00 39.07 2.94
3215 3771 5.713792 TGAGTCTCAGTCAAAAGTCCTAG 57.286 43.478 0.00 0.00 0.00 3.02
3216 3772 4.021894 TGAGTCTCAGTCAAAAGTCCTAGC 60.022 45.833 0.00 0.00 0.00 3.42
3217 3773 3.898123 AGTCTCAGTCAAAAGTCCTAGCA 59.102 43.478 0.00 0.00 0.00 3.49
3218 3774 4.345257 AGTCTCAGTCAAAAGTCCTAGCAA 59.655 41.667 0.00 0.00 0.00 3.91
3219 3775 5.057149 GTCTCAGTCAAAAGTCCTAGCAAA 58.943 41.667 0.00 0.00 0.00 3.68
3220 3776 5.527582 GTCTCAGTCAAAAGTCCTAGCAAAA 59.472 40.000 0.00 0.00 0.00 2.44
3221 3777 6.038271 GTCTCAGTCAAAAGTCCTAGCAAAAA 59.962 38.462 0.00 0.00 0.00 1.94
3247 3803 6.696411 AGAGTCTTGGTCAACTGAGATTTAG 58.304 40.000 0.00 0.00 0.00 1.85
3251 3807 6.150140 GTCTTGGTCAACTGAGATTTAGCAAT 59.850 38.462 0.00 0.00 0.00 3.56
3276 3832 2.479566 TGCTCTAAACTCAGGCTTGG 57.520 50.000 0.00 0.00 0.00 3.61
3317 3873 7.620880 ACATACTAGGAGTATTTGTTTGCTCA 58.379 34.615 0.00 0.00 39.26 4.26
3378 3934 3.988976 ACAAGCAGAGTACACATCCAT 57.011 42.857 0.00 0.00 0.00 3.41
3382 3938 7.308450 ACAAGCAGAGTACACATCCATATAT 57.692 36.000 0.00 0.00 0.00 0.86
3398 3954 6.239217 CCATATATGGCACCTCTAGCATTA 57.761 41.667 18.77 0.00 41.75 1.90
3399 3955 6.835174 CCATATATGGCACCTCTAGCATTAT 58.165 40.000 18.77 0.00 41.75 1.28
3400 3956 6.933521 CCATATATGGCACCTCTAGCATTATC 59.066 42.308 18.77 0.00 41.75 1.75
3401 3957 7.419403 CCATATATGGCACCTCTAGCATTATCA 60.419 40.741 18.77 0.00 41.75 2.15
3402 3958 3.475566 TGGCACCTCTAGCATTATCAC 57.524 47.619 0.00 0.00 0.00 3.06
3403 3959 3.041211 TGGCACCTCTAGCATTATCACT 58.959 45.455 0.00 0.00 0.00 3.41
3404 3960 3.455910 TGGCACCTCTAGCATTATCACTT 59.544 43.478 0.00 0.00 0.00 3.16
3405 3961 4.061596 GGCACCTCTAGCATTATCACTTC 58.938 47.826 0.00 0.00 0.00 3.01
3406 3962 4.202305 GGCACCTCTAGCATTATCACTTCT 60.202 45.833 0.00 0.00 0.00 2.85
3407 3963 5.011125 GGCACCTCTAGCATTATCACTTCTA 59.989 44.000 0.00 0.00 0.00 2.10
3408 3964 6.295575 GGCACCTCTAGCATTATCACTTCTAT 60.296 42.308 0.00 0.00 0.00 1.98
3409 3965 6.811170 GCACCTCTAGCATTATCACTTCTATC 59.189 42.308 0.00 0.00 0.00 2.08
3410 3966 7.524532 GCACCTCTAGCATTATCACTTCTATCA 60.525 40.741 0.00 0.00 0.00 2.15
3411 3967 8.530311 CACCTCTAGCATTATCACTTCTATCAT 58.470 37.037 0.00 0.00 0.00 2.45
3412 3968 9.099071 ACCTCTAGCATTATCACTTCTATCATT 57.901 33.333 0.00 0.00 0.00 2.57
3418 3974 9.868277 AGCATTATCACTTCTATCATTACTAGC 57.132 33.333 0.00 0.00 0.00 3.42
3419 3975 9.645059 GCATTATCACTTCTATCATTACTAGCA 57.355 33.333 0.00 0.00 0.00 3.49
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.522355 CTGCGGCAGGTACATCTGG 60.522 63.158 22.11 0.00 35.43 3.86
1 2 0.529337 CTCTGCGGCAGGTACATCTG 60.529 60.000 28.18 1.86 37.79 2.90
2 3 0.684479 TCTCTGCGGCAGGTACATCT 60.684 55.000 28.18 0.00 31.51 2.90
3 4 0.528684 GTCTCTGCGGCAGGTACATC 60.529 60.000 28.18 10.53 31.51 3.06
4 5 1.517832 GTCTCTGCGGCAGGTACAT 59.482 57.895 28.18 0.00 31.51 2.29
5 6 2.970639 GTCTCTGCGGCAGGTACA 59.029 61.111 28.18 9.43 31.51 2.90
6 7 2.202623 CGTCTCTGCGGCAGGTAC 60.203 66.667 28.18 23.06 31.51 3.34
7 8 4.129737 GCGTCTCTGCGGCAGGTA 62.130 66.667 28.18 14.70 31.51 3.08
10 11 4.731612 ACTGCGTCTCTGCGGCAG 62.732 66.667 23.72 23.72 45.31 4.85
11 12 4.724602 GACTGCGTCTCTGCGGCA 62.725 66.667 1.29 1.29 45.31 5.69
12 13 4.724602 TGACTGCGTCTCTGCGGC 62.725 66.667 9.49 0.00 45.31 6.53
13 14 2.807045 GTGACTGCGTCTCTGCGG 60.807 66.667 9.49 0.00 46.83 5.69
14 15 2.050077 TGTGACTGCGTCTCTGCG 60.050 61.111 9.49 0.00 37.81 5.18
15 16 0.732196 CTCTGTGACTGCGTCTCTGC 60.732 60.000 9.49 0.00 33.15 4.26
16 17 0.595588 ACTCTGTGACTGCGTCTCTG 59.404 55.000 9.49 9.53 33.15 3.35
17 18 0.878416 GACTCTGTGACTGCGTCTCT 59.122 55.000 5.51 0.00 33.15 3.10
18 19 0.593618 TGACTCTGTGACTGCGTCTC 59.406 55.000 12.58 6.93 33.15 3.36
19 20 1.032794 TTGACTCTGTGACTGCGTCT 58.967 50.000 12.58 0.00 33.15 4.18
20 21 1.723542 CATTGACTCTGTGACTGCGTC 59.276 52.381 5.76 5.76 0.00 5.19
21 22 1.341209 TCATTGACTCTGTGACTGCGT 59.659 47.619 0.00 0.00 0.00 5.24
22 23 1.991264 CTCATTGACTCTGTGACTGCG 59.009 52.381 0.00 0.00 0.00 5.18
23 24 3.309961 TCTCATTGACTCTGTGACTGC 57.690 47.619 0.00 0.00 0.00 4.40
24 25 6.751425 GTCTAATCTCATTGACTCTGTGACTG 59.249 42.308 0.00 0.00 0.00 3.51
25 26 6.404184 CGTCTAATCTCATTGACTCTGTGACT 60.404 42.308 0.00 0.00 0.00 3.41
26 27 5.741510 CGTCTAATCTCATTGACTCTGTGAC 59.258 44.000 0.00 0.00 0.00 3.67
27 28 5.648092 TCGTCTAATCTCATTGACTCTGTGA 59.352 40.000 0.00 0.00 0.00 3.58
28 29 5.884771 TCGTCTAATCTCATTGACTCTGTG 58.115 41.667 0.00 0.00 0.00 3.66
29 30 6.071896 TGTTCGTCTAATCTCATTGACTCTGT 60.072 38.462 0.00 0.00 0.00 3.41
30 31 6.252441 GTGTTCGTCTAATCTCATTGACTCTG 59.748 42.308 0.00 0.00 0.00 3.35
31 32 6.326375 GTGTTCGTCTAATCTCATTGACTCT 58.674 40.000 0.00 0.00 0.00 3.24
32 33 5.228220 CGTGTTCGTCTAATCTCATTGACTC 59.772 44.000 0.00 0.00 0.00 3.36
33 34 5.096169 CGTGTTCGTCTAATCTCATTGACT 58.904 41.667 0.00 0.00 0.00 3.41
34 35 5.362987 CGTGTTCGTCTAATCTCATTGAC 57.637 43.478 0.00 0.00 0.00 3.18
49 50 0.386352 TCTTCCGCTGTACGTGTTCG 60.386 55.000 0.00 0.00 41.42 3.95
50 51 1.337821 CTCTTCCGCTGTACGTGTTC 58.662 55.000 0.00 0.00 41.42 3.18
51 52 0.038526 CCTCTTCCGCTGTACGTGTT 60.039 55.000 0.00 0.00 41.42 3.32
52 53 0.892358 TCCTCTTCCGCTGTACGTGT 60.892 55.000 0.00 0.00 41.42 4.49
53 54 0.179161 CTCCTCTTCCGCTGTACGTG 60.179 60.000 0.00 0.00 41.42 4.49
54 55 0.322277 TCTCCTCTTCCGCTGTACGT 60.322 55.000 0.00 0.00 41.42 3.57
55 56 0.809385 TTCTCCTCTTCCGCTGTACG 59.191 55.000 0.00 0.00 43.15 3.67
56 57 3.254892 CTTTTCTCCTCTTCCGCTGTAC 58.745 50.000 0.00 0.00 0.00 2.90
57 58 2.233922 CCTTTTCTCCTCTTCCGCTGTA 59.766 50.000 0.00 0.00 0.00 2.74
58 59 1.002544 CCTTTTCTCCTCTTCCGCTGT 59.997 52.381 0.00 0.00 0.00 4.40
59 60 1.731720 CCTTTTCTCCTCTTCCGCTG 58.268 55.000 0.00 0.00 0.00 5.18
60 61 0.035915 GCCTTTTCTCCTCTTCCGCT 60.036 55.000 0.00 0.00 0.00 5.52
61 62 0.321653 TGCCTTTTCTCCTCTTCCGC 60.322 55.000 0.00 0.00 0.00 5.54
62 63 1.677217 CCTGCCTTTTCTCCTCTTCCG 60.677 57.143 0.00 0.00 0.00 4.30
63 64 1.340502 CCCTGCCTTTTCTCCTCTTCC 60.341 57.143 0.00 0.00 0.00 3.46
64 65 1.630878 TCCCTGCCTTTTCTCCTCTTC 59.369 52.381 0.00 0.00 0.00 2.87
65 66 1.747444 TCCCTGCCTTTTCTCCTCTT 58.253 50.000 0.00 0.00 0.00 2.85
66 67 1.352687 GTTCCCTGCCTTTTCTCCTCT 59.647 52.381 0.00 0.00 0.00 3.69
67 68 1.827681 GTTCCCTGCCTTTTCTCCTC 58.172 55.000 0.00 0.00 0.00 3.71
68 69 0.036875 CGTTCCCTGCCTTTTCTCCT 59.963 55.000 0.00 0.00 0.00 3.69
69 70 0.960861 CCGTTCCCTGCCTTTTCTCC 60.961 60.000 0.00 0.00 0.00 3.71
70 71 1.587043 GCCGTTCCCTGCCTTTTCTC 61.587 60.000 0.00 0.00 0.00 2.87
71 72 1.603739 GCCGTTCCCTGCCTTTTCT 60.604 57.895 0.00 0.00 0.00 2.52
72 73 2.636412 GGCCGTTCCCTGCCTTTTC 61.636 63.158 0.00 0.00 44.46 2.29
73 74 2.600470 GGCCGTTCCCTGCCTTTT 60.600 61.111 0.00 0.00 44.46 2.27
79 80 2.608970 ATTGGATCGGCCGTTCCCTG 62.609 60.000 39.36 8.92 40.66 4.45
80 81 2.325393 GATTGGATCGGCCGTTCCCT 62.325 60.000 39.36 30.28 40.66 4.20
81 82 1.892391 GATTGGATCGGCCGTTCCC 60.892 63.158 39.36 30.00 40.66 3.97
82 83 1.892391 GGATTGGATCGGCCGTTCC 60.892 63.158 37.56 37.56 40.66 3.62
83 84 0.746563 TTGGATTGGATCGGCCGTTC 60.747 55.000 27.15 25.91 40.66 3.95
84 85 0.322997 TTTGGATTGGATCGGCCGTT 60.323 50.000 27.15 18.42 40.66 4.44
85 86 0.748005 CTTTGGATTGGATCGGCCGT 60.748 55.000 27.15 12.96 40.66 5.68
86 87 0.748005 ACTTTGGATTGGATCGGCCG 60.748 55.000 22.12 22.12 40.66 6.13
87 88 1.474330 AACTTTGGATTGGATCGGCC 58.526 50.000 0.00 0.00 37.10 6.13
88 89 3.013921 TGTAACTTTGGATTGGATCGGC 58.986 45.455 0.00 0.00 0.00 5.54
89 90 4.513442 TCTGTAACTTTGGATTGGATCGG 58.487 43.478 0.00 0.00 0.00 4.18
90 91 6.494893 TTTCTGTAACTTTGGATTGGATCG 57.505 37.500 0.00 0.00 0.00 3.69
91 92 8.522830 TGATTTTCTGTAACTTTGGATTGGATC 58.477 33.333 0.00 0.00 0.00 3.36
92 93 8.421249 TGATTTTCTGTAACTTTGGATTGGAT 57.579 30.769 0.00 0.00 0.00 3.41
93 94 7.831691 TGATTTTCTGTAACTTTGGATTGGA 57.168 32.000 0.00 0.00 0.00 3.53
94 95 8.928733 CATTGATTTTCTGTAACTTTGGATTGG 58.071 33.333 0.00 0.00 0.00 3.16
95 96 8.928733 CCATTGATTTTCTGTAACTTTGGATTG 58.071 33.333 0.00 0.00 0.00 2.67
96 97 8.869109 TCCATTGATTTTCTGTAACTTTGGATT 58.131 29.630 0.00 0.00 0.00 3.01
97 98 8.421249 TCCATTGATTTTCTGTAACTTTGGAT 57.579 30.769 0.00 0.00 0.00 3.41
98 99 7.831691 TCCATTGATTTTCTGTAACTTTGGA 57.168 32.000 0.00 0.00 0.00 3.53
99 100 7.114811 CGTTCCATTGATTTTCTGTAACTTTGG 59.885 37.037 0.00 0.00 0.00 3.28
100 101 7.860373 TCGTTCCATTGATTTTCTGTAACTTTG 59.140 33.333 0.00 0.00 0.00 2.77
101 102 7.936584 TCGTTCCATTGATTTTCTGTAACTTT 58.063 30.769 0.00 0.00 0.00 2.66
102 103 7.504924 TCGTTCCATTGATTTTCTGTAACTT 57.495 32.000 0.00 0.00 0.00 2.66
103 104 7.687941 ATCGTTCCATTGATTTTCTGTAACT 57.312 32.000 0.00 0.00 0.00 2.24
104 105 8.382003 GAATCGTTCCATTGATTTTCTGTAAC 57.618 34.615 0.00 0.00 35.06 2.50
121 122 2.007608 CGGGGAGAAAAGGAATCGTTC 58.992 52.381 0.00 0.00 0.00 3.95
122 123 1.339727 CCGGGGAGAAAAGGAATCGTT 60.340 52.381 0.00 0.00 0.00 3.85
123 124 0.252197 CCGGGGAGAAAAGGAATCGT 59.748 55.000 0.00 0.00 0.00 3.73
124 125 0.252197 ACCGGGGAGAAAAGGAATCG 59.748 55.000 6.32 0.00 0.00 3.34
125 126 1.560146 AGACCGGGGAGAAAAGGAATC 59.440 52.381 6.32 0.00 0.00 2.52
126 127 1.560146 GAGACCGGGGAGAAAAGGAAT 59.440 52.381 6.32 0.00 0.00 3.01
127 128 0.981943 GAGACCGGGGAGAAAAGGAA 59.018 55.000 6.32 0.00 0.00 3.36
128 129 0.908180 GGAGACCGGGGAGAAAAGGA 60.908 60.000 6.32 0.00 0.00 3.36
129 130 1.198759 TGGAGACCGGGGAGAAAAGG 61.199 60.000 6.32 0.00 0.00 3.11
130 131 0.036294 GTGGAGACCGGGGAGAAAAG 60.036 60.000 6.32 0.00 0.00 2.27
131 132 1.823169 CGTGGAGACCGGGGAGAAAA 61.823 60.000 6.32 0.00 0.00 2.29
132 133 2.280552 CGTGGAGACCGGGGAGAAA 61.281 63.158 6.32 0.00 0.00 2.52
133 134 2.678934 CGTGGAGACCGGGGAGAA 60.679 66.667 6.32 0.00 0.00 2.87
134 135 3.975591 ACGTGGAGACCGGGGAGA 61.976 66.667 6.32 0.00 0.00 3.71
135 136 3.760035 CACGTGGAGACCGGGGAG 61.760 72.222 7.95 0.00 0.00 4.30
136 137 4.289101 TCACGTGGAGACCGGGGA 62.289 66.667 17.00 0.00 0.00 4.81
137 138 4.065281 GTCACGTGGAGACCGGGG 62.065 72.222 17.00 0.00 0.00 5.73
138 139 4.065281 GGTCACGTGGAGACCGGG 62.065 72.222 17.00 0.00 45.35 5.73
142 143 1.731424 CGTACATGGTCACGTGGAGAC 60.731 57.143 17.00 6.51 37.94 3.36
143 144 0.524414 CGTACATGGTCACGTGGAGA 59.476 55.000 17.00 0.00 37.94 3.71
144 145 3.030209 CGTACATGGTCACGTGGAG 57.970 57.895 17.00 4.01 37.94 3.86
149 150 1.004785 TTCGCACGTACATGGTCACG 61.005 55.000 13.19 13.19 43.63 4.35
150 151 1.355971 ATTCGCACGTACATGGTCAC 58.644 50.000 0.00 0.00 0.00 3.67
151 152 2.943449 TATTCGCACGTACATGGTCA 57.057 45.000 0.00 0.00 0.00 4.02
152 153 2.475111 CCATATTCGCACGTACATGGTC 59.525 50.000 0.00 0.00 0.00 4.02
153 154 2.479837 CCATATTCGCACGTACATGGT 58.520 47.619 0.00 0.00 0.00 3.55
154 155 1.798223 CCCATATTCGCACGTACATGG 59.202 52.381 0.00 0.52 34.07 3.66
155 156 1.194547 GCCCATATTCGCACGTACATG 59.805 52.381 0.00 0.00 0.00 3.21
156 157 1.508632 GCCCATATTCGCACGTACAT 58.491 50.000 0.00 0.00 0.00 2.29
157 158 0.531090 GGCCCATATTCGCACGTACA 60.531 55.000 0.00 0.00 0.00 2.90
158 159 0.531090 TGGCCCATATTCGCACGTAC 60.531 55.000 0.00 0.00 0.00 3.67
159 160 0.249699 CTGGCCCATATTCGCACGTA 60.250 55.000 0.00 0.00 0.00 3.57
160 161 1.523711 CTGGCCCATATTCGCACGT 60.524 57.895 0.00 0.00 0.00 4.49
161 162 2.253758 CCTGGCCCATATTCGCACG 61.254 63.158 0.00 0.00 0.00 5.34
162 163 2.555547 GCCTGGCCCATATTCGCAC 61.556 63.158 7.66 0.00 0.00 5.34
163 164 2.203337 GCCTGGCCCATATTCGCA 60.203 61.111 7.66 0.00 0.00 5.10
164 165 2.985847 GGCCTGGCCCATATTCGC 60.986 66.667 27.77 0.00 44.06 4.70
174 175 2.037847 AGATTTGGTGGGCCTGGC 59.962 61.111 11.05 11.05 35.27 4.85
175 176 0.542702 AACAGATTTGGTGGGCCTGG 60.543 55.000 4.53 0.00 35.27 4.45
176 177 1.341080 AAACAGATTTGGTGGGCCTG 58.659 50.000 4.53 0.00 35.27 4.85
177 178 2.110011 AGTAAACAGATTTGGTGGGCCT 59.890 45.455 4.53 0.00 35.27 5.19
178 179 2.525368 AGTAAACAGATTTGGTGGGCC 58.475 47.619 0.00 0.00 0.00 5.80
179 180 4.600692 AAAGTAAACAGATTTGGTGGGC 57.399 40.909 0.00 0.00 0.00 5.36
180 181 6.405278 AGAAAAGTAAACAGATTTGGTGGG 57.595 37.500 0.00 0.00 0.00 4.61
181 182 7.542130 GCATAGAAAAGTAAACAGATTTGGTGG 59.458 37.037 0.00 0.00 0.00 4.61
182 183 8.299570 AGCATAGAAAAGTAAACAGATTTGGTG 58.700 33.333 0.00 0.00 0.00 4.17
183 184 8.409358 AGCATAGAAAAGTAAACAGATTTGGT 57.591 30.769 0.00 0.00 0.00 3.67
184 185 9.994432 CTAGCATAGAAAAGTAAACAGATTTGG 57.006 33.333 0.00 0.00 42.77 3.28
185 186 9.495754 GCTAGCATAGAAAAGTAAACAGATTTG 57.504 33.333 10.63 0.00 42.77 2.32
186 187 9.454859 AGCTAGCATAGAAAAGTAAACAGATTT 57.545 29.630 18.83 0.00 42.77 2.17
188 189 9.757227 CTAGCTAGCATAGAAAAGTAAACAGAT 57.243 33.333 18.83 0.00 42.77 2.90
206 207 3.806571 AGCTTCTGCGTGCTAGCTAGC 62.807 57.143 34.20 34.20 46.06 3.42
207 208 0.102120 AGCTTCTGCGTGCTAGCTAG 59.898 55.000 16.84 16.84 41.87 3.42
208 209 0.179127 CAGCTTCTGCGTGCTAGCTA 60.179 55.000 17.23 0.00 41.76 3.32
209 210 1.447489 CAGCTTCTGCGTGCTAGCT 60.447 57.895 17.23 9.71 44.34 3.32
210 211 1.419874 CTCAGCTTCTGCGTGCTAGC 61.420 60.000 8.10 8.10 45.42 3.42
211 212 1.419874 GCTCAGCTTCTGCGTGCTAG 61.420 60.000 0.00 0.00 45.42 3.42
212 213 1.446792 GCTCAGCTTCTGCGTGCTA 60.447 57.895 0.00 0.00 45.42 3.49
213 214 2.741598 GCTCAGCTTCTGCGTGCT 60.742 61.111 0.00 0.00 45.42 4.40
214 215 4.144681 CGCTCAGCTTCTGCGTGC 62.145 66.667 14.27 1.61 45.42 5.34
218 219 3.194308 GCCTCGCTCAGCTTCTGC 61.194 66.667 0.00 0.00 40.05 4.26
219 220 2.884685 CGCCTCGCTCAGCTTCTG 60.885 66.667 0.00 0.00 0.00 3.02
230 231 1.552348 GATCAAATCTCGGCGCCTCG 61.552 60.000 26.68 15.32 0.00 4.63
231 232 0.530650 TGATCAAATCTCGGCGCCTC 60.531 55.000 26.68 12.34 0.00 4.70
232 233 0.107703 TTGATCAAATCTCGGCGCCT 60.108 50.000 26.68 1.35 0.00 5.52
233 234 0.732571 TTTGATCAAATCTCGGCGCC 59.267 50.000 19.07 19.07 0.00 6.53
234 235 2.542766 TTTTGATCAAATCTCGGCGC 57.457 45.000 21.10 0.00 0.00 6.53
235 236 7.504922 TTTTTATTTTGATCAAATCTCGGCG 57.495 32.000 21.10 0.00 36.43 6.46
256 257 1.806247 GCGCCTGGCTCTTTTGTTTTT 60.806 47.619 17.92 0.00 39.11 1.94
257 258 0.249447 GCGCCTGGCTCTTTTGTTTT 60.249 50.000 17.92 0.00 39.11 2.43
258 259 1.363807 GCGCCTGGCTCTTTTGTTT 59.636 52.632 17.92 0.00 39.11 2.83
259 260 1.827789 TGCGCCTGGCTCTTTTGTT 60.828 52.632 17.92 0.00 44.05 2.83
260 261 2.203337 TGCGCCTGGCTCTTTTGT 60.203 55.556 17.92 0.00 44.05 2.83
261 262 2.256461 GTGCGCCTGGCTCTTTTG 59.744 61.111 17.92 0.41 44.05 2.44
262 263 3.357079 CGTGCGCCTGGCTCTTTT 61.357 61.111 17.92 0.00 44.05 2.27
308 309 3.396260 TTTCAAAGTAGCTACAGCCGT 57.604 42.857 25.28 1.45 43.38 5.68
312 313 5.088739 CCGCATTTTTCAAAGTAGCTACAG 58.911 41.667 25.28 14.42 0.00 2.74
314 315 4.155280 TCCCGCATTTTTCAAAGTAGCTAC 59.845 41.667 16.43 16.43 0.00 3.58
315 316 4.328536 TCCCGCATTTTTCAAAGTAGCTA 58.671 39.130 0.00 0.00 0.00 3.32
320 324 3.987220 CGAATTCCCGCATTTTTCAAAGT 59.013 39.130 0.00 0.00 0.00 2.66
344 348 1.196766 ATCACAGACCAGAGCAGCCA 61.197 55.000 0.00 0.00 0.00 4.75
346 350 1.805871 GCTATCACAGACCAGAGCAGC 60.806 57.143 0.00 0.00 0.00 5.25
347 351 1.535649 CGCTATCACAGACCAGAGCAG 60.536 57.143 0.00 0.00 0.00 4.24
364 368 3.006247 GAGAAGAATTGCTCCTTTCGCT 58.994 45.455 0.00 0.00 0.00 4.93
376 380 6.127310 ACAAGTATAGGCAGACGAGAAGAATT 60.127 38.462 0.00 0.00 0.00 2.17
391 395 6.487331 ACGTATCTCCTCAAGACAAGTATAGG 59.513 42.308 0.00 0.00 36.65 2.57
420 424 0.394938 AGTAATCCACACCACACGCA 59.605 50.000 0.00 0.00 0.00 5.24
421 425 2.268298 CTAGTAATCCACACCACACGC 58.732 52.381 0.00 0.00 0.00 5.34
422 426 3.587797 ACTAGTAATCCACACCACACG 57.412 47.619 0.00 0.00 0.00 4.49
423 427 3.924686 CGAACTAGTAATCCACACCACAC 59.075 47.826 0.00 0.00 0.00 3.82
424 428 3.827876 TCGAACTAGTAATCCACACCACA 59.172 43.478 0.00 0.00 0.00 4.17
425 429 4.421948 CTCGAACTAGTAATCCACACCAC 58.578 47.826 0.00 0.00 0.00 4.16
426 430 3.446161 CCTCGAACTAGTAATCCACACCA 59.554 47.826 0.00 0.00 0.00 4.17
427 431 3.737355 GCCTCGAACTAGTAATCCACACC 60.737 52.174 0.00 0.00 0.00 4.16
450 454 3.492311 TTTCGGCCCAAAGTTGCGC 62.492 57.895 0.00 0.00 0.00 6.09
466 470 0.179092 GAACGATCGATCCCCGGTTT 60.179 55.000 24.34 1.22 39.14 3.27
470 474 1.007271 CCAGAACGATCGATCCCCG 60.007 63.158 24.34 11.38 40.25 5.73
535 542 7.090173 TGGTGAGACTTTTTCTTCTGTTTTTG 58.910 34.615 0.00 0.00 33.22 2.44
568 583 4.535781 TGGAATAATCAGGGACCAATGTG 58.464 43.478 0.00 0.00 0.00 3.21
578 593 4.574013 GTGAGCAGACTTGGAATAATCAGG 59.426 45.833 0.00 0.00 0.00 3.86
589 604 0.179048 TGGTGTGGTGAGCAGACTTG 60.179 55.000 11.69 0.00 0.00 3.16
590 605 0.107456 CTGGTGTGGTGAGCAGACTT 59.893 55.000 11.69 0.00 42.92 3.01
595 610 2.447572 TCCCTGGTGTGGTGAGCA 60.448 61.111 0.00 0.00 0.00 4.26
617 632 4.137543 AGCTCAACCAGTCTAAAAACCAG 58.862 43.478 0.00 0.00 0.00 4.00
618 633 4.134563 GAGCTCAACCAGTCTAAAAACCA 58.865 43.478 9.40 0.00 0.00 3.67
620 635 3.186613 CGGAGCTCAACCAGTCTAAAAAC 59.813 47.826 17.19 0.00 0.00 2.43
631 647 3.718815 CTTACTAATCCGGAGCTCAACC 58.281 50.000 17.19 0.00 0.00 3.77
658 674 3.947910 TTCCCACTTTCACTACTACCG 57.052 47.619 0.00 0.00 0.00 4.02
659 675 9.322773 GTATATTTTCCCACTTTCACTACTACC 57.677 37.037 0.00 0.00 0.00 3.18
660 676 9.028185 CGTATATTTTCCCACTTTCACTACTAC 57.972 37.037 0.00 0.00 0.00 2.73
662 678 7.844009 TCGTATATTTTCCCACTTTCACTACT 58.156 34.615 0.00 0.00 0.00 2.57
826 872 2.839043 TTTATAGTGGTGGCGCGCGT 62.839 55.000 32.35 12.21 0.00 6.01
911 962 3.883744 CTGGGAACGCGAGGCTTGT 62.884 63.158 15.93 0.00 0.00 3.16
939 990 1.604278 GGAGATAATTGGCTTCACGGC 59.396 52.381 0.00 0.00 38.97 5.68
941 992 2.540101 GTCGGAGATAATTGGCTTCACG 59.460 50.000 0.00 0.00 40.67 4.35
986 1040 2.550101 GCCATCTGCAAGCGGGATC 61.550 63.158 0.37 0.00 40.77 3.36
993 1047 1.817099 GGGAGTCGCCATCTGCAAG 60.817 63.158 0.00 0.00 41.33 4.01
1023 1077 1.153289 CGGCAGGGTCTGATCAAGG 60.153 63.158 0.00 0.00 32.44 3.61
1375 1441 2.746277 GCGGTTCTTGGCCACGAT 60.746 61.111 13.43 0.00 0.00 3.73
1629 1695 2.203788 TCAAGGGACGCCACCTCT 60.204 61.111 0.00 0.00 37.35 3.69
2060 2584 3.637998 AGCAGCTGTGAAATTGTGAAG 57.362 42.857 16.64 0.00 0.00 3.02
2061 2585 5.512753 TTAAGCAGCTGTGAAATTGTGAA 57.487 34.783 16.64 0.00 0.00 3.18
2062 2586 5.710513 ATTAAGCAGCTGTGAAATTGTGA 57.289 34.783 16.64 0.00 0.00 3.58
2065 2589 9.793252 AGTAATAATTAAGCAGCTGTGAAATTG 57.207 29.630 16.64 0.00 0.00 2.32
2066 2590 9.793252 CAGTAATAATTAAGCAGCTGTGAAATT 57.207 29.630 16.64 18.32 0.00 1.82
2067 2591 8.960591 ACAGTAATAATTAAGCAGCTGTGAAAT 58.039 29.630 16.64 9.39 35.06 2.17
2068 2592 8.335532 ACAGTAATAATTAAGCAGCTGTGAAA 57.664 30.769 16.64 7.37 35.06 2.69
2090 2614 3.879295 ACTCACATTTCACAGTGGAACAG 59.121 43.478 0.00 0.00 41.80 3.16
2092 2616 3.876914 TGACTCACATTTCACAGTGGAAC 59.123 43.478 0.00 0.00 36.43 3.62
2093 2617 4.149511 TGACTCACATTTCACAGTGGAA 57.850 40.909 0.00 0.00 36.43 3.53
2094 2618 3.836365 TGACTCACATTTCACAGTGGA 57.164 42.857 0.00 0.00 36.43 4.02
2138 2664 0.390472 GTTGCCCTGAGGAGAGAACG 60.390 60.000 0.00 0.00 33.47 3.95
2566 3104 4.324797 GCAACCAAAACCCCCTACTACTAT 60.325 45.833 0.00 0.00 0.00 2.12
2705 3256 1.687628 GTCACTCTCACCGTTTCGAG 58.312 55.000 0.00 0.00 0.00 4.04
2854 3407 3.498397 TGAAGTTTGAGACGATCCTTTGC 59.502 43.478 0.00 0.00 0.00 3.68
2877 3430 4.491676 CAAAGGAAGCAATGAAGATGTGG 58.508 43.478 0.00 0.00 0.00 4.17
2919 3472 5.289595 TGGTTAATTCTCGATCGATTGAGG 58.710 41.667 32.81 19.34 38.57 3.86
2925 3478 5.515797 AGACATGGTTAATTCTCGATCGA 57.484 39.130 18.32 18.32 0.00 3.59
2930 3483 7.827819 TTGACTAAGACATGGTTAATTCTCG 57.172 36.000 0.00 0.00 0.00 4.04
2935 3488 7.822334 TCGTCATTTGACTAAGACATGGTTAAT 59.178 33.333 8.91 0.00 42.66 1.40
2943 3496 8.771920 ATATGTTTCGTCATTTGACTAAGACA 57.228 30.769 8.91 10.50 42.66 3.41
2982 3538 9.314321 TCCGTGCAAAGTTTTCATTTTAATTTA 57.686 25.926 0.00 0.00 0.00 1.40
3016 3572 5.974158 CGATGCTATATTCGTGGGATCTTAG 59.026 44.000 0.00 0.00 0.00 2.18
3020 3576 4.106197 GTCGATGCTATATTCGTGGGATC 58.894 47.826 0.00 0.00 36.74 3.36
3070 3626 5.778241 GGGGGTCATCCTTCTTTTCTAAAAA 59.222 40.000 0.00 0.00 35.33 1.94
3071 3627 5.330233 GGGGGTCATCCTTCTTTTCTAAAA 58.670 41.667 0.00 0.00 35.33 1.52
3072 3628 4.566907 CGGGGGTCATCCTTCTTTTCTAAA 60.567 45.833 0.00 0.00 35.33 1.85
3073 3629 3.054655 CGGGGGTCATCCTTCTTTTCTAA 60.055 47.826 0.00 0.00 35.33 2.10
3074 3630 2.504175 CGGGGGTCATCCTTCTTTTCTA 59.496 50.000 0.00 0.00 35.33 2.10
3075 3631 1.282157 CGGGGGTCATCCTTCTTTTCT 59.718 52.381 0.00 0.00 35.33 2.52
3076 3632 1.682087 CCGGGGGTCATCCTTCTTTTC 60.682 57.143 0.00 0.00 35.33 2.29
3077 3633 0.331616 CCGGGGGTCATCCTTCTTTT 59.668 55.000 0.00 0.00 35.33 2.27
3078 3634 1.999346 CCGGGGGTCATCCTTCTTT 59.001 57.895 0.00 0.00 35.33 2.52
3079 3635 2.680370 GCCGGGGGTCATCCTTCTT 61.680 63.158 2.18 0.00 35.33 2.52
3080 3636 3.090532 GCCGGGGGTCATCCTTCT 61.091 66.667 2.18 0.00 35.33 2.85
3081 3637 4.191015 GGCCGGGGGTCATCCTTC 62.191 72.222 2.18 0.00 35.33 3.46
3082 3638 4.760220 AGGCCGGGGGTCATCCTT 62.760 66.667 2.18 0.00 35.33 3.36
3085 3641 3.866582 CAGAGGCCGGGGGTCATC 61.867 72.222 2.18 0.00 0.00 2.92
3091 3647 4.559063 CAGATGCAGAGGCCGGGG 62.559 72.222 2.18 0.00 40.13 5.73
3092 3648 4.559063 CCAGATGCAGAGGCCGGG 62.559 72.222 2.18 0.00 40.13 5.73
3093 3649 4.559063 CCCAGATGCAGAGGCCGG 62.559 72.222 0.00 0.00 40.13 6.13
3094 3650 3.457625 CTCCCAGATGCAGAGGCCG 62.458 68.421 0.00 0.00 40.13 6.13
3095 3651 1.417288 ATCTCCCAGATGCAGAGGCC 61.417 60.000 0.00 0.00 40.13 5.19
3096 3652 0.250381 CATCTCCCAGATGCAGAGGC 60.250 60.000 0.61 0.00 44.69 4.70
3104 3660 0.322975 GCCGCATACATCTCCCAGAT 59.677 55.000 0.00 0.00 34.74 2.90
3105 3661 1.748403 GCCGCATACATCTCCCAGA 59.252 57.895 0.00 0.00 0.00 3.86
3106 3662 1.302033 GGCCGCATACATCTCCCAG 60.302 63.158 0.00 0.00 0.00 4.45
3107 3663 1.418097 ATGGCCGCATACATCTCCCA 61.418 55.000 0.00 0.00 0.00 4.37
3108 3664 0.250901 AATGGCCGCATACATCTCCC 60.251 55.000 0.00 0.00 0.00 4.30
3109 3665 1.609208 AAATGGCCGCATACATCTCC 58.391 50.000 0.00 0.00 0.00 3.71
3110 3666 5.048782 TCAATAAAATGGCCGCATACATCTC 60.049 40.000 0.00 0.00 0.00 2.75
3111 3667 4.826733 TCAATAAAATGGCCGCATACATCT 59.173 37.500 0.00 0.00 0.00 2.90
3112 3668 5.119931 TCAATAAAATGGCCGCATACATC 57.880 39.130 0.00 0.00 0.00 3.06
3113 3669 5.726980 ATCAATAAAATGGCCGCATACAT 57.273 34.783 0.00 0.00 0.00 2.29
3114 3670 5.528043 AATCAATAAAATGGCCGCATACA 57.472 34.783 0.00 0.00 0.00 2.29
3115 3671 8.028938 AGAATAATCAATAAAATGGCCGCATAC 58.971 33.333 0.00 0.00 0.00 2.39
3116 3672 8.121305 AGAATAATCAATAAAATGGCCGCATA 57.879 30.769 0.00 0.00 0.00 3.14
3117 3673 6.996509 AGAATAATCAATAAAATGGCCGCAT 58.003 32.000 0.00 0.00 0.00 4.73
3118 3674 6.403866 AGAATAATCAATAAAATGGCCGCA 57.596 33.333 0.00 0.00 0.00 5.69
3119 3675 5.569059 CGAGAATAATCAATAAAATGGCCGC 59.431 40.000 0.00 0.00 0.00 6.53
3120 3676 6.898041 TCGAGAATAATCAATAAAATGGCCG 58.102 36.000 0.00 0.00 0.00 6.13
3121 3677 8.514594 TCATCGAGAATAATCAATAAAATGGCC 58.485 33.333 0.00 0.00 0.00 5.36
3122 3678 9.334693 GTCATCGAGAATAATCAATAAAATGGC 57.665 33.333 0.00 0.00 0.00 4.40
3123 3679 9.831737 GGTCATCGAGAATAATCAATAAAATGG 57.168 33.333 0.00 0.00 0.00 3.16
3130 3686 9.613428 TTTGTAAGGTCATCGAGAATAATCAAT 57.387 29.630 0.00 0.00 0.00 2.57
3131 3687 9.098355 CTTTGTAAGGTCATCGAGAATAATCAA 57.902 33.333 0.00 0.00 0.00 2.57
3132 3688 8.258007 ACTTTGTAAGGTCATCGAGAATAATCA 58.742 33.333 0.00 0.00 0.00 2.57
3133 3689 8.649973 ACTTTGTAAGGTCATCGAGAATAATC 57.350 34.615 0.00 0.00 0.00 1.75
3158 3714 9.764363 GGCGGATTCAGACATATTGATATAATA 57.236 33.333 0.00 0.00 0.00 0.98
3159 3715 8.267183 TGGCGGATTCAGACATATTGATATAAT 58.733 33.333 0.00 0.00 0.00 1.28
3160 3716 7.619965 TGGCGGATTCAGACATATTGATATAA 58.380 34.615 0.00 0.00 0.00 0.98
3161 3717 7.181569 TGGCGGATTCAGACATATTGATATA 57.818 36.000 0.00 0.00 0.00 0.86
3162 3718 6.053632 TGGCGGATTCAGACATATTGATAT 57.946 37.500 0.00 0.00 0.00 1.63
3163 3719 5.482163 TGGCGGATTCAGACATATTGATA 57.518 39.130 0.00 0.00 0.00 2.15
3164 3720 4.356405 TGGCGGATTCAGACATATTGAT 57.644 40.909 0.00 0.00 0.00 2.57
3165 3721 3.836365 TGGCGGATTCAGACATATTGA 57.164 42.857 0.00 0.00 0.00 2.57
3166 3722 4.321718 AGATGGCGGATTCAGACATATTG 58.678 43.478 5.04 0.00 37.49 1.90
3167 3723 4.630644 AGATGGCGGATTCAGACATATT 57.369 40.909 5.04 0.00 37.49 1.28
3168 3724 4.321718 CAAGATGGCGGATTCAGACATAT 58.678 43.478 5.04 0.00 37.49 1.78
3169 3725 3.494924 CCAAGATGGCGGATTCAGACATA 60.495 47.826 5.04 0.00 37.49 2.29
3170 3726 2.569059 CAAGATGGCGGATTCAGACAT 58.431 47.619 4.70 4.70 40.62 3.06
3171 3727 1.407299 CCAAGATGGCGGATTCAGACA 60.407 52.381 0.00 0.00 0.00 3.41
3172 3728 1.303309 CCAAGATGGCGGATTCAGAC 58.697 55.000 0.00 0.00 0.00 3.51
3173 3729 0.911769 ACCAAGATGGCGGATTCAGA 59.088 50.000 0.00 0.00 42.67 3.27
3174 3730 1.402968 CAACCAAGATGGCGGATTCAG 59.597 52.381 0.00 0.00 42.67 3.02
3175 3731 1.004161 TCAACCAAGATGGCGGATTCA 59.996 47.619 0.00 0.00 42.67 2.57
3176 3732 1.672881 CTCAACCAAGATGGCGGATTC 59.327 52.381 0.00 0.00 42.67 2.52
3177 3733 1.004745 ACTCAACCAAGATGGCGGATT 59.995 47.619 0.00 0.00 42.67 3.01
3178 3734 0.620556 ACTCAACCAAGATGGCGGAT 59.379 50.000 0.00 0.00 42.67 4.18
3179 3735 0.036388 GACTCAACCAAGATGGCGGA 60.036 55.000 0.00 0.00 42.67 5.54
3180 3736 0.036010 AGACTCAACCAAGATGGCGG 60.036 55.000 0.00 0.00 42.67 6.13
3181 3737 1.338105 TGAGACTCAACCAAGATGGCG 60.338 52.381 1.64 0.00 42.67 5.69
3182 3738 2.289945 ACTGAGACTCAACCAAGATGGC 60.290 50.000 6.61 0.00 42.67 4.40
3183 3739 3.007290 TGACTGAGACTCAACCAAGATGG 59.993 47.826 6.61 0.00 45.02 3.51
3184 3740 4.263018 TGACTGAGACTCAACCAAGATG 57.737 45.455 6.61 0.00 0.00 2.90
3185 3741 4.963318 TTGACTGAGACTCAACCAAGAT 57.037 40.909 6.61 0.00 0.00 2.40
3186 3742 4.753516 TTTGACTGAGACTCAACCAAGA 57.246 40.909 6.61 3.06 0.00 3.02
3187 3743 4.878397 ACTTTTGACTGAGACTCAACCAAG 59.122 41.667 6.61 10.30 0.00 3.61
3188 3744 4.843728 ACTTTTGACTGAGACTCAACCAA 58.156 39.130 6.61 10.26 0.00 3.67
3189 3745 4.442706 GACTTTTGACTGAGACTCAACCA 58.557 43.478 6.61 4.61 0.00 3.67
3190 3746 3.810386 GGACTTTTGACTGAGACTCAACC 59.190 47.826 6.61 1.96 0.00 3.77
3191 3747 4.698575 AGGACTTTTGACTGAGACTCAAC 58.301 43.478 6.61 4.67 0.00 3.18
3192 3748 5.509840 GCTAGGACTTTTGACTGAGACTCAA 60.510 44.000 6.61 0.00 0.00 3.02
3193 3749 4.021894 GCTAGGACTTTTGACTGAGACTCA 60.022 45.833 4.78 4.78 0.00 3.41
3194 3750 4.021894 TGCTAGGACTTTTGACTGAGACTC 60.022 45.833 0.00 0.00 0.00 3.36
3195 3751 3.898123 TGCTAGGACTTTTGACTGAGACT 59.102 43.478 0.00 0.00 0.00 3.24
3196 3752 4.258702 TGCTAGGACTTTTGACTGAGAC 57.741 45.455 0.00 0.00 0.00 3.36
3197 3753 4.955811 TTGCTAGGACTTTTGACTGAGA 57.044 40.909 0.00 0.00 0.00 3.27
3198 3754 6.377327 TTTTTGCTAGGACTTTTGACTGAG 57.623 37.500 0.00 0.00 0.00 3.35
3219 3775 5.745227 TCTCAGTTGACCAAGACTCTTTTT 58.255 37.500 0.00 0.00 0.00 1.94
3220 3776 5.359194 TCTCAGTTGACCAAGACTCTTTT 57.641 39.130 0.00 0.00 0.00 2.27
3221 3777 5.559148 ATCTCAGTTGACCAAGACTCTTT 57.441 39.130 0.00 0.00 0.00 2.52
3222 3778 5.559148 AATCTCAGTTGACCAAGACTCTT 57.441 39.130 0.00 0.00 0.00 2.85
3223 3779 5.559148 AAATCTCAGTTGACCAAGACTCT 57.441 39.130 0.00 0.00 0.00 3.24
3224 3780 5.350091 GCTAAATCTCAGTTGACCAAGACTC 59.650 44.000 0.00 0.00 0.00 3.36
3225 3781 5.221722 TGCTAAATCTCAGTTGACCAAGACT 60.222 40.000 0.00 0.00 0.00 3.24
3226 3782 4.997395 TGCTAAATCTCAGTTGACCAAGAC 59.003 41.667 0.00 0.00 0.00 3.01
3227 3783 5.227569 TGCTAAATCTCAGTTGACCAAGA 57.772 39.130 0.00 0.00 0.00 3.02
3228 3784 5.947228 TTGCTAAATCTCAGTTGACCAAG 57.053 39.130 0.00 0.00 0.00 3.61
3229 3785 5.415701 GGATTGCTAAATCTCAGTTGACCAA 59.584 40.000 0.00 0.00 41.74 3.67
3230 3786 4.943705 GGATTGCTAAATCTCAGTTGACCA 59.056 41.667 0.00 0.00 41.74 4.02
3231 3787 4.336713 GGGATTGCTAAATCTCAGTTGACC 59.663 45.833 0.00 0.00 42.13 4.02
3232 3788 4.034510 CGGGATTGCTAAATCTCAGTTGAC 59.965 45.833 0.00 0.00 42.61 3.18
3233 3789 4.191544 CGGGATTGCTAAATCTCAGTTGA 58.808 43.478 0.00 0.00 42.61 3.18
3234 3790 3.941483 ACGGGATTGCTAAATCTCAGTTG 59.059 43.478 0.00 0.00 42.61 3.16
3235 3791 4.222124 ACGGGATTGCTAAATCTCAGTT 57.778 40.909 0.00 0.00 42.61 3.16
3237 3793 4.542662 CAACGGGATTGCTAAATCTCAG 57.457 45.455 0.00 0.00 42.61 3.35
3251 3807 1.275291 CCTGAGTTTAGAGCAACGGGA 59.725 52.381 0.00 0.00 0.00 5.14
3261 3817 1.909700 TTGCCCAAGCCTGAGTTTAG 58.090 50.000 0.00 0.00 38.69 1.85
3262 3818 2.364002 GTTTTGCCCAAGCCTGAGTTTA 59.636 45.455 0.00 0.00 38.69 2.01
3263 3819 1.138859 GTTTTGCCCAAGCCTGAGTTT 59.861 47.619 0.00 0.00 38.69 2.66
3264 3820 0.752658 GTTTTGCCCAAGCCTGAGTT 59.247 50.000 0.00 0.00 38.69 3.01
3265 3821 0.106015 AGTTTTGCCCAAGCCTGAGT 60.106 50.000 0.00 0.00 38.69 3.41
3266 3822 1.043022 AAGTTTTGCCCAAGCCTGAG 58.957 50.000 0.00 0.00 38.69 3.35
3267 3823 0.752054 CAAGTTTTGCCCAAGCCTGA 59.248 50.000 0.00 0.00 38.69 3.86
3268 3824 0.249996 CCAAGTTTTGCCCAAGCCTG 60.250 55.000 0.00 0.00 38.69 4.85
3276 3832 7.040271 TCCTAGTATGTAAAACCAAGTTTTGCC 60.040 37.037 14.13 6.60 43.71 4.52
3309 3865 2.866156 GTTTTGGAGCCTTTGAGCAAAC 59.134 45.455 0.00 0.00 34.23 2.93
3317 3873 0.031616 TGGTGGGTTTTGGAGCCTTT 60.032 50.000 0.00 0.00 46.39 3.11
3378 3934 6.669591 AGTGATAATGCTAGAGGTGCCATATA 59.330 38.462 0.00 0.00 0.00 0.86
3382 3938 3.041211 AGTGATAATGCTAGAGGTGCCA 58.959 45.455 0.00 0.00 0.00 4.92


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.