Multiple sequence alignment - TraesCS7B01G363900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G363900 chr7B 100.000 5602 0 0 1 5602 626243744 626238143 0.000000e+00 10346.0
1 TraesCS7B01G363900 chr7B 80.925 346 42 15 119 450 626532271 626531936 9.320000e-63 252.0
2 TraesCS7B01G363900 chr7B 85.629 167 14 3 192 357 626387784 626387627 3.470000e-37 167.0
3 TraesCS7B01G363900 chr7A 89.168 2788 216 52 658 3397 659557657 659554908 0.000000e+00 3397.0
4 TraesCS7B01G363900 chr7A 90.887 1657 91 19 3490 5124 659554727 659553109 0.000000e+00 2169.0
5 TraesCS7B01G363900 chr7A 82.228 377 43 13 286 644 659558215 659557845 2.540000e-78 303.0
6 TraesCS7B01G363900 chr7A 83.673 245 19 10 56 279 659558847 659558603 1.580000e-50 211.0
7 TraesCS7B01G363900 chr7A 94.595 37 1 1 5406 5442 659430054 659430019 7.840000e-04 56.5
8 TraesCS7B01G363900 chr7D 92.633 1941 111 11 1480 3399 570666878 570664949 0.000000e+00 2763.0
9 TraesCS7B01G363900 chr7D 90.262 1715 106 28 3490 5172 570664930 570663245 0.000000e+00 2185.0
10 TraesCS7B01G363900 chr7D 86.087 1150 74 36 750 1837 570668269 570667144 0.000000e+00 1158.0
11 TraesCS7B01G363900 chr7D 84.244 1098 107 28 4043 5125 570655640 570654594 0.000000e+00 1009.0
12 TraesCS7B01G363900 chr7D 86.928 459 34 6 115 563 570668710 570668268 5.040000e-135 492.0
13 TraesCS7B01G363900 chr7D 86.765 340 43 2 3490 3827 570656233 570655894 1.470000e-100 377.0
14 TraesCS7B01G363900 chr7D 94.949 99 4 1 3388 3485 41837671 41837769 2.700000e-33 154.0
15 TraesCS7B01G363900 chr7D 92.157 102 5 3 3379 3480 79628442 79628344 2.100000e-29 141.0
16 TraesCS7B01G363900 chr7D 78.313 166 15 7 5175 5340 570654512 570654368 2.780000e-13 87.9
17 TraesCS7B01G363900 chr7D 92.727 55 3 1 5388 5442 570654370 570654317 1.670000e-10 78.7
18 TraesCS7B01G363900 chr7D 86.792 53 4 2 5173 5224 570663204 570663154 7.840000e-04 56.5
19 TraesCS7B01G363900 chr4A 94.124 936 51 4 943 1878 651852927 651851996 0.000000e+00 1421.0
20 TraesCS7B01G363900 chr4A 100.000 28 0 0 1863 1890 651851983 651851956 1.000000e-02 52.8
21 TraesCS7B01G363900 chr1B 93.917 937 52 5 943 1878 615954036 615954968 0.000000e+00 1410.0
22 TraesCS7B01G363900 chr1B 95.050 101 5 0 3658 3758 601175255 601175355 5.810000e-35 159.0
23 TraesCS7B01G363900 chr1B 100.000 32 0 0 3571 3602 601175202 601175233 6.060000e-05 60.2
24 TraesCS7B01G363900 chr1B 100.000 28 0 0 1863 1890 615954980 615955007 1.000000e-02 52.8
25 TraesCS7B01G363900 chr6D 96.703 91 3 0 3396 3486 309072588 309072498 9.720000e-33 152.0
26 TraesCS7B01G363900 chr1D 94.845 97 5 0 3388 3484 295954308 295954212 9.720000e-33 152.0
27 TraesCS7B01G363900 chr1D 91.743 109 7 2 3396 3502 421923319 421923211 3.500000e-32 150.0
28 TraesCS7B01G363900 chr1D 96.875 32 1 0 3571 3602 36393497 36393528 3.000000e-03 54.7
29 TraesCS7B01G363900 chr3D 95.699 93 4 0 3396 3488 303788541 303788449 3.500000e-32 150.0
30 TraesCS7B01G363900 chr3D 90.654 107 9 1 3377 3483 539118888 539118993 2.100000e-29 141.0
31 TraesCS7B01G363900 chr3D 91.379 58 1 1 883 940 77351645 77351698 6.020000e-10 76.8
32 TraesCS7B01G363900 chr2D 95.745 94 2 2 3388 3480 53145719 53145811 3.500000e-32 150.0
33 TraesCS7B01G363900 chr2D 92.105 38 3 0 3571 3608 349928900 349928863 3.000000e-03 54.7
34 TraesCS7B01G363900 chr4D 93.137 102 6 1 3393 3493 121405555 121405454 1.260000e-31 148.0
35 TraesCS7B01G363900 chr6B 88.333 60 6 1 5544 5602 55734550 55734491 2.800000e-08 71.3
36 TraesCS7B01G363900 chr5B 92.105 38 3 0 3571 3608 483525661 483525624 3.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G363900 chr7B 626238143 626243744 5601 True 10346.00 10346 100.00000 1 5602 1 chr7B.!!$R1 5601
1 TraesCS7B01G363900 chr7A 659553109 659558847 5738 True 1520.00 3397 86.48900 56 5124 4 chr7A.!!$R2 5068
2 TraesCS7B01G363900 chr7D 570663154 570668710 5556 True 1330.90 2763 88.54040 115 5224 5 chr7D.!!$R3 5109
3 TraesCS7B01G363900 chr7D 570654317 570656233 1916 True 388.15 1009 85.51225 3490 5442 4 chr7D.!!$R2 1952
4 TraesCS7B01G363900 chr4A 651851956 651852927 971 True 736.90 1421 97.06200 943 1890 2 chr4A.!!$R1 947
5 TraesCS7B01G363900 chr1B 615954036 615955007 971 False 731.40 1410 96.95850 943 1890 2 chr1B.!!$F2 947

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
408 818 0.248907 TTGACGGCTGCGCTATAGTC 60.249 55.0 9.73 13.7 0.00 2.59 F
1231 1883 0.042448 GCGGATAATTCGGTGTTCGC 60.042 55.0 0.00 0.0 39.05 4.70 F
1253 1911 0.610232 AATTTCGCCTGCTCCTGCTT 60.610 50.0 0.00 0.0 40.48 3.91 F
2875 4198 0.589708 GACCAAACCGTTTCCTTCCG 59.410 55.0 0.00 0.0 0.00 4.30 F
2994 4318 0.038159 AACTCAACGAAGGCGGAGAG 60.038 55.0 0.00 0.0 43.52 3.20 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2098 3416 0.103937 TGCAAAGAAAGGTTTGGCCG 59.896 50.000 0.00 0.00 43.70 6.13 R
2725 4048 0.250234 ATCACACGGATGACACCCAG 59.750 55.000 0.00 0.00 34.06 4.45 R
2906 4230 2.182827 CTCCATCTTCAGGACCTGACA 58.817 52.381 24.24 13.83 40.46 3.58 R
4454 5984 0.755698 CTAACCGCTGGCTCCTCCTA 60.756 60.000 0.00 0.00 35.26 2.94 R
4770 6310 1.336440 AGCTATGTCTACTGCGCAGAG 59.664 52.381 42.03 30.95 0.00 3.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 5.071370 ACTACTCCGGTCACTAGATTATGG 58.929 45.833 0.00 0.00 0.00 2.74
25 26 3.912248 ACTCCGGTCACTAGATTATGGT 58.088 45.455 0.00 0.00 0.00 3.55
26 27 3.890147 ACTCCGGTCACTAGATTATGGTC 59.110 47.826 0.00 0.00 0.00 4.02
27 28 2.882761 TCCGGTCACTAGATTATGGTCG 59.117 50.000 0.00 0.00 0.00 4.79
28 29 2.607282 CCGGTCACTAGATTATGGTCGC 60.607 54.545 0.00 0.00 0.00 5.19
29 30 2.293677 CGGTCACTAGATTATGGTCGCT 59.706 50.000 0.00 0.00 0.00 4.93
30 31 3.609644 CGGTCACTAGATTATGGTCGCTC 60.610 52.174 0.00 0.00 0.00 5.03
31 32 3.556513 GTCACTAGATTATGGTCGCTCG 58.443 50.000 0.00 0.00 0.00 5.03
32 33 2.552743 TCACTAGATTATGGTCGCTCGG 59.447 50.000 0.00 0.00 0.00 4.63
33 34 2.552743 CACTAGATTATGGTCGCTCGGA 59.447 50.000 0.00 0.00 0.00 4.55
34 35 2.553172 ACTAGATTATGGTCGCTCGGAC 59.447 50.000 0.00 0.00 45.31 4.79
58 59 4.736631 GTTCAAGAACGGCGGCGC 62.737 66.667 32.57 26.17 0.00 6.53
178 183 0.382515 CAGGTAGTAGTCTCGCAGGC 59.617 60.000 0.00 0.00 0.00 4.85
293 700 1.218316 CGGGAACAGGCTACAGACC 59.782 63.158 0.00 0.00 0.00 3.85
348 755 4.334481 CACTGTACGACCCACTTTTTCTTT 59.666 41.667 0.00 0.00 0.00 2.52
375 785 1.081242 CGTTGCACAATCCACTGGC 60.081 57.895 0.00 0.00 0.00 4.85
399 809 3.093278 CCGAGATTTGACGGCTGC 58.907 61.111 0.00 0.00 42.55 5.25
408 818 0.248907 TTGACGGCTGCGCTATAGTC 60.249 55.000 9.73 13.70 0.00 2.59
417 835 1.605710 TGCGCTATAGTCTACGAACCC 59.394 52.381 9.73 0.00 0.00 4.11
433 851 0.923358 ACCCAACCTTGAGTGGACAA 59.077 50.000 0.00 0.00 0.00 3.18
434 852 1.318576 CCCAACCTTGAGTGGACAAC 58.681 55.000 0.00 0.00 0.00 3.32
487 908 0.835276 CTGAGGATCCAGACCATGCA 59.165 55.000 15.82 0.00 36.29 3.96
488 909 0.835276 TGAGGATCCAGACCATGCAG 59.165 55.000 15.82 0.00 0.00 4.41
489 910 0.534652 GAGGATCCAGACCATGCAGC 60.535 60.000 15.82 0.00 0.00 5.25
504 925 3.801114 TGCAGCTCGACTACAATACAT 57.199 42.857 0.00 0.00 0.00 2.29
506 927 3.865164 TGCAGCTCGACTACAATACATTG 59.135 43.478 0.37 0.37 43.26 2.82
508 929 3.865164 CAGCTCGACTACAATACATTGCA 59.135 43.478 1.84 0.00 41.38 4.08
509 930 4.509230 CAGCTCGACTACAATACATTGCAT 59.491 41.667 1.84 0.00 41.38 3.96
525 947 5.105228 ACATTGCATTATAGGTTGCTTGCTT 60.105 36.000 0.00 0.00 39.60 3.91
555 981 0.916581 GAATACGTACAACCCGCGAC 59.083 55.000 8.23 0.00 0.00 5.19
556 982 0.527565 AATACGTACAACCCGCGACT 59.472 50.000 8.23 0.00 0.00 4.18
565 991 1.924524 CAACCCGCGACTGTACTTATG 59.075 52.381 8.23 0.00 0.00 1.90
567 993 1.404391 ACCCGCGACTGTACTTATGAG 59.596 52.381 8.23 0.00 0.00 2.90
569 995 1.202256 CCGCGACTGTACTTATGAGCA 60.202 52.381 8.23 0.00 0.00 4.26
570 996 1.846782 CGCGACTGTACTTATGAGCAC 59.153 52.381 0.00 0.00 0.00 4.40
571 997 1.846782 GCGACTGTACTTATGAGCACG 59.153 52.381 0.00 0.00 0.00 5.34
572 998 2.731341 GCGACTGTACTTATGAGCACGT 60.731 50.000 0.00 0.00 0.00 4.49
573 999 3.499048 CGACTGTACTTATGAGCACGTT 58.501 45.455 0.00 0.00 0.00 3.99
574 1000 3.542704 CGACTGTACTTATGAGCACGTTC 59.457 47.826 0.00 0.00 0.00 3.95
586 1015 1.134818 AGCACGTTCTGAACAGTGTCA 60.135 47.619 28.47 0.00 37.83 3.58
614 1043 5.142061 TCTTCCGTGTACTTTATTGAGCA 57.858 39.130 0.00 0.00 0.00 4.26
649 1079 6.842163 TCTTTAAAGAAAGATTGCCGCTTAG 58.158 36.000 15.57 0.00 44.94 2.18
651 1081 3.350219 AAGAAAGATTGCCGCTTAGGA 57.650 42.857 0.00 0.00 45.00 2.94
652 1082 2.911484 AGAAAGATTGCCGCTTAGGAG 58.089 47.619 0.00 0.00 45.00 3.69
653 1083 2.237392 AGAAAGATTGCCGCTTAGGAGT 59.763 45.455 0.00 0.00 45.00 3.85
654 1084 3.451178 AGAAAGATTGCCGCTTAGGAGTA 59.549 43.478 0.00 0.00 45.00 2.59
655 1085 3.460857 AAGATTGCCGCTTAGGAGTAG 57.539 47.619 0.00 0.00 45.00 2.57
660 1264 1.066430 TGCCGCTTAGGAGTAGTTTGG 60.066 52.381 0.00 0.00 45.00 3.28
672 1276 2.158755 AGTAGTTTGGTTGCTGACTGCT 60.159 45.455 5.87 0.00 43.37 4.24
690 1294 5.884771 ACTGCTGAGACTTTTTCTGTTTTC 58.115 37.500 0.00 0.00 33.22 2.29
692 1296 5.883661 TGCTGAGACTTTTTCTGTTTTCTG 58.116 37.500 0.00 0.00 33.22 3.02
697 1301 6.878923 TGAGACTTTTTCTGTTTTCTGAGACA 59.121 34.615 0.00 0.00 33.22 3.41
705 1309 4.096382 TCTGTTTTCTGAGACAAGTTTGCC 59.904 41.667 0.00 0.00 0.00 4.52
708 1312 1.597742 TCTGAGACAAGTTTGCCTGC 58.402 50.000 0.00 0.00 0.00 4.85
709 1313 0.595095 CTGAGACAAGTTTGCCTGCC 59.405 55.000 0.00 0.00 0.00 4.85
714 1318 0.886490 ACAAGTTTGCCTGCCGAGAG 60.886 55.000 0.00 0.00 0.00 3.20
716 1320 0.603975 AAGTTTGCCTGCCGAGAGTC 60.604 55.000 0.00 0.00 0.00 3.36
732 1336 2.438614 TCGAGAGCGAGAGGTGGG 60.439 66.667 0.00 0.00 45.11 4.61
733 1337 2.752238 CGAGAGCGAGAGGTGGGT 60.752 66.667 0.00 0.00 45.11 4.51
737 1341 2.524394 AGCGAGAGGTGGGTGTGT 60.524 61.111 0.00 0.00 42.35 3.72
746 1351 2.772191 TGGGTGTGTGGTGGCTCT 60.772 61.111 0.00 0.00 0.00 4.09
747 1352 1.460497 TGGGTGTGTGGTGGCTCTA 60.460 57.895 0.00 0.00 0.00 2.43
754 1359 2.438021 TGTGTGGTGGCTCTAGTTTTCT 59.562 45.455 0.00 0.00 0.00 2.52
779 1384 1.896122 AAGTAGGAAACCCGAGGGCG 61.896 60.000 8.33 0.00 39.32 6.13
783 1388 2.330372 GGAAACCCGAGGGCGAAAC 61.330 63.158 8.33 0.00 40.82 2.78
784 1389 1.598685 GAAACCCGAGGGCGAAACA 60.599 57.895 8.33 0.00 40.82 2.83
786 1391 3.546714 AACCCGAGGGCGAAACAGG 62.547 63.158 8.33 0.00 40.82 4.00
792 1398 1.069227 CGAGGGCGAAACAGGAAAAAG 60.069 52.381 0.00 0.00 40.82 2.27
848 1455 2.732619 CGGACTTCCCCTGCCTACC 61.733 68.421 0.00 0.00 0.00 3.18
850 1457 2.687566 ACTTCCCCTGCCTACCCG 60.688 66.667 0.00 0.00 0.00 5.28
852 1459 2.365105 TTCCCCTGCCTACCCGAG 60.365 66.667 0.00 0.00 0.00 4.63
856 1463 3.541713 CCTGCCTACCCGAGCCTC 61.542 72.222 0.00 0.00 0.00 4.70
857 1464 3.541713 CTGCCTACCCGAGCCTCC 61.542 72.222 0.00 0.00 0.00 4.30
907 1523 1.705997 AACGCCACACCTCCTTCCTT 61.706 55.000 0.00 0.00 0.00 3.36
909 1525 1.831652 CGCCACACCTCCTTCCTTCT 61.832 60.000 0.00 0.00 0.00 2.85
910 1526 0.402121 GCCACACCTCCTTCCTTCTT 59.598 55.000 0.00 0.00 0.00 2.52
940 1556 1.340211 ACGATTCGTCCCTCACTCTCT 60.340 52.381 5.75 0.00 33.69 3.10
941 1557 2.093075 ACGATTCGTCCCTCACTCTCTA 60.093 50.000 5.75 0.00 33.69 2.43
1087 1724 3.072468 TCTTCTACACCCCGGCCG 61.072 66.667 21.04 21.04 0.00 6.13
1227 1879 1.480954 ACTCTGCGGATAATTCGGTGT 59.519 47.619 0.00 0.00 0.00 4.16
1231 1883 0.042448 GCGGATAATTCGGTGTTCGC 60.042 55.000 0.00 0.00 39.05 4.70
1253 1911 0.610232 AATTTCGCCTGCTCCTGCTT 60.610 50.000 0.00 0.00 40.48 3.91
1254 1912 1.028868 ATTTCGCCTGCTCCTGCTTC 61.029 55.000 0.00 0.00 40.48 3.86
1255 1913 2.395988 TTTCGCCTGCTCCTGCTTCA 62.396 55.000 0.00 0.00 40.48 3.02
1256 1914 2.793160 TTCGCCTGCTCCTGCTTCAG 62.793 60.000 0.00 0.00 40.48 3.02
1473 2166 2.826128 TCACTGTCCTCACATGACCTAC 59.174 50.000 0.00 0.00 31.60 3.18
1534 2230 4.574421 TGACAGTTTCTCAAGAATTTGCGA 59.426 37.500 0.00 0.00 34.21 5.10
1579 2275 1.207089 TGTCCATGTGGCTACTAGTGC 59.793 52.381 5.39 7.18 34.44 4.40
1587 2283 2.603560 GTGGCTACTAGTGCGATTGTTC 59.396 50.000 5.39 0.00 0.00 3.18
1669 2370 4.947388 TGGATACATTGTTGCCTTAGGAAC 59.053 41.667 0.69 4.61 46.17 3.62
1749 3066 6.437162 TGTTTTATTTTAAGCCATGCTCCTCT 59.563 34.615 0.00 0.00 38.25 3.69
1882 3199 7.201539 CTGAAAGAGAACATCTGATGTTGCTAG 60.202 40.741 33.73 20.97 45.74 3.42
1898 3215 2.817258 TGCTAGCCCATGTGTTTACAAC 59.183 45.455 13.29 0.00 40.84 3.32
1950 3267 3.085443 AGTGTATCGGCTCAAGAATCG 57.915 47.619 0.00 0.00 0.00 3.34
1963 3280 2.483583 AGAATCGTGATGCGTCTCTC 57.516 50.000 7.58 0.00 42.13 3.20
1994 3311 6.214191 TCGATGTCTTGCTCTTCTTTCTAT 57.786 37.500 0.00 0.00 0.00 1.98
2048 3366 2.436417 TCTTTGCTTGACCATGTAGGC 58.564 47.619 0.00 0.00 43.14 3.93
2052 3370 1.202867 TGCTTGACCATGTAGGCACAA 60.203 47.619 0.00 0.00 43.14 3.33
2086 3404 3.305516 CCCAAAGTGCACAGGGGC 61.306 66.667 25.97 0.00 37.66 5.80
2088 3406 2.567497 CCAAAGTGCACAGGGGCAG 61.567 63.158 21.04 1.15 45.96 4.85
2098 3416 2.125106 AGGGGCAGAATTCGCGAC 60.125 61.111 9.15 0.00 0.00 5.19
2127 3445 5.606348 ACCTTTCTTTGCAAATACCAACA 57.394 34.783 13.23 0.00 0.00 3.33
2199 3517 1.376037 CCCCAGTTCGACAAGAGCC 60.376 63.158 0.00 0.00 0.00 4.70
2235 3553 3.526534 GCCTAACTCAGCTAGACCAAAG 58.473 50.000 0.00 0.00 0.00 2.77
2367 3685 5.555966 ACTCAACCAGGATCTTTCTCTTTC 58.444 41.667 0.00 0.00 0.00 2.62
2484 3805 1.549170 GTCGACCACCCAACTACATCT 59.451 52.381 3.51 0.00 0.00 2.90
2546 3867 9.772973 AATGCGAGATTATATACCTTTTACACA 57.227 29.630 0.00 0.00 0.00 3.72
2565 3886 0.779997 AGGCCAGTTGGAAATGAGGT 59.220 50.000 5.01 0.00 37.39 3.85
2585 3906 3.315191 GGTCTTGCACTGTCTTAAGCAAA 59.685 43.478 0.00 0.00 45.18 3.68
2694 4017 4.039973 TCACTTTCAGTACCAGGAAATCGT 59.960 41.667 0.00 0.64 33.00 3.73
2725 4048 3.932089 GAGTTTGAGGAGAGCAGATTCAC 59.068 47.826 0.00 0.00 0.00 3.18
2783 4106 3.557898 CCTGTTCCAGCTGATACAGTTGT 60.558 47.826 29.85 0.00 40.28 3.32
2810 4133 5.368256 ACTGATGTCATTGAAGAAACAGC 57.632 39.130 0.00 0.00 0.00 4.40
2834 4157 7.285858 AGCTGACGGTATCTACTCTCTTTAAAT 59.714 37.037 0.00 0.00 0.00 1.40
2865 4188 5.935789 TCTGGTATTTTCTTAGACCAAACCG 59.064 40.000 0.00 0.00 41.34 4.44
2875 4198 0.589708 GACCAAACCGTTTCCTTCCG 59.410 55.000 0.00 0.00 0.00 4.30
2906 4230 3.485463 TTGTTCATTCCAGTCGTCCTT 57.515 42.857 0.00 0.00 0.00 3.36
2994 4318 0.038159 AACTCAACGAAGGCGGAGAG 60.038 55.000 0.00 0.00 43.52 3.20
3133 4457 2.533916 AGAATCTGCCTGTGACTCTGA 58.466 47.619 0.00 0.00 0.00 3.27
3210 4534 2.028930 AGCAGCTCAACAGTACAGGTAC 60.029 50.000 1.33 1.33 36.35 3.34
3219 4543 3.585862 ACAGTACAGGTACGAATGCTTG 58.414 45.455 4.09 0.00 40.80 4.01
3228 4552 6.042777 CAGGTACGAATGCTTGAGAGAATAA 58.957 40.000 0.00 0.00 0.00 1.40
3245 4569 8.050778 AGAGAATAATTTGGTTCGCAAATACA 57.949 30.769 0.00 0.00 32.58 2.29
3295 4619 6.084738 TGGATTGATAGGTAGGAATGCTACT 58.915 40.000 11.59 1.31 0.00 2.57
3296 4620 6.014242 TGGATTGATAGGTAGGAATGCTACTG 60.014 42.308 11.59 0.00 0.00 2.74
3345 4684 6.766467 TCTGAAACAGAGAAGGGAAAACTAAC 59.234 38.462 0.00 0.00 35.39 2.34
3404 4758 6.661777 TCTACTCTTAGAAGTTACTCCCTCC 58.338 44.000 0.00 0.00 30.88 4.30
3407 4761 4.268359 TCTTAGAAGTTACTCCCTCCGTC 58.732 47.826 0.00 0.00 0.00 4.79
3417 4771 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
3418 4772 5.019657 ACTCCCTCCGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
3420 4774 5.222484 ACTCCCTCCGTCCCATAATATAAGA 60.222 44.000 0.00 0.00 0.00 2.10
3421 4775 5.269991 TCCCTCCGTCCCATAATATAAGAG 58.730 45.833 0.00 0.00 0.00 2.85
3422 4776 4.141914 CCCTCCGTCCCATAATATAAGAGC 60.142 50.000 0.00 0.00 0.00 4.09
3423 4777 4.440250 CCTCCGTCCCATAATATAAGAGCG 60.440 50.000 0.00 0.00 0.00 5.03
3425 4779 4.525487 TCCGTCCCATAATATAAGAGCGTT 59.475 41.667 0.00 0.00 0.00 4.84
3427 4781 5.699458 CCGTCCCATAATATAAGAGCGTTTT 59.301 40.000 0.00 0.00 0.00 2.43
3428 4782 6.204108 CCGTCCCATAATATAAGAGCGTTTTT 59.796 38.462 0.00 0.00 0.00 1.94
3456 4890 3.793559 ACACTAGTGTGAAAAACGCTCT 58.206 40.909 27.41 0.00 46.98 4.09
3457 4891 4.189231 ACACTAGTGTGAAAAACGCTCTT 58.811 39.130 27.41 0.00 46.98 2.85
3463 4897 9.865321 ACTAGTGTGAAAAACGCTCTTATATTA 57.135 29.630 0.00 0.00 46.98 0.98
3467 4901 7.376072 GTGTGAAAAACGCTCTTATATTATGGC 59.624 37.037 0.00 0.00 36.31 4.40
3470 4904 5.591643 AAACGCTCTTATATTATGGCACG 57.408 39.130 0.00 0.00 0.00 5.34
3480 4914 1.410004 TTATGGCACGGAGGGAGTAG 58.590 55.000 0.00 0.00 0.00 2.57
3481 4915 0.554305 TATGGCACGGAGGGAGTAGA 59.446 55.000 0.00 0.00 0.00 2.59
3482 4916 0.325296 ATGGCACGGAGGGAGTAGAA 60.325 55.000 0.00 0.00 0.00 2.10
3483 4917 0.543410 TGGCACGGAGGGAGTAGAAA 60.543 55.000 0.00 0.00 0.00 2.52
3484 4918 0.611714 GGCACGGAGGGAGTAGAAAA 59.388 55.000 0.00 0.00 0.00 2.29
3485 4919 1.675116 GGCACGGAGGGAGTAGAAAAC 60.675 57.143 0.00 0.00 0.00 2.43
3486 4920 1.001633 GCACGGAGGGAGTAGAAAACA 59.998 52.381 0.00 0.00 0.00 2.83
3487 4921 2.931320 GCACGGAGGGAGTAGAAAACAG 60.931 54.545 0.00 0.00 0.00 3.16
3488 4922 1.275573 ACGGAGGGAGTAGAAAACAGC 59.724 52.381 0.00 0.00 0.00 4.40
3677 5113 7.703328 TCACTTGAATGTAACTCAACCTTTTC 58.297 34.615 0.00 0.00 0.00 2.29
3829 5265 5.216622 AGCATCCACTATGGGTAAGTAAGA 58.783 41.667 0.00 0.00 38.32 2.10
3928 5449 7.766278 TGAGAATTTGAGATAGTAAACAGGCTC 59.234 37.037 0.00 0.00 0.00 4.70
3940 5461 1.959042 ACAGGCTCTTCAGTGTTGTG 58.041 50.000 0.00 0.00 0.00 3.33
3941 5462 0.590195 CAGGCTCTTCAGTGTTGTGC 59.410 55.000 0.00 0.00 0.00 4.57
3971 5492 8.190784 CAGTGAAAGACCAAAATTCTAGTGTTT 58.809 33.333 0.00 0.00 0.00 2.83
3972 5493 8.749354 AGTGAAAGACCAAAATTCTAGTGTTTT 58.251 29.630 0.00 0.00 0.00 2.43
3988 5509 2.224329 TGTTTTACTACTGCGCCTTCCA 60.224 45.455 4.18 0.00 0.00 3.53
4025 5546 8.655092 CAAATTAGTGTTGAGTTTGCTGAAAAA 58.345 29.630 0.00 0.00 0.00 1.94
4074 5602 0.171007 GTCAATGGTGGCACATTCGG 59.829 55.000 20.82 4.64 44.52 4.30
4093 5621 1.433534 GTTCCAGTAGTGCTGCAGTC 58.566 55.000 16.64 8.39 43.71 3.51
4095 5623 1.446792 CCAGTAGTGCTGCAGTCGG 60.447 63.158 16.64 9.45 43.71 4.79
4182 5712 3.703001 TCCGAATCTTCTTTGCTCCTT 57.297 42.857 0.00 0.00 0.00 3.36
4262 5792 8.579850 TCCTGTTTGCTCATATCTTTTACAAT 57.420 30.769 0.00 0.00 0.00 2.71
4335 5865 7.625606 GCGTTTACAGCACCTCTTAATGTTTAT 60.626 37.037 0.00 0.00 34.19 1.40
4354 5884 8.160521 TGTTTATCACTAAACTTGCAGCTAAA 57.839 30.769 9.04 0.00 44.63 1.85
4437 5967 1.135257 CGAACTCACTGCTAGTGGAGG 60.135 57.143 13.87 8.73 45.94 4.30
4454 5984 0.030297 AGGGCATGAGGTGGAGATCT 60.030 55.000 0.00 0.00 0.00 2.75
4466 5999 1.146774 TGGAGATCTAGGAGGAGCCAG 59.853 57.143 0.00 0.00 40.02 4.85
4484 6017 4.079090 CGGTTAGCTCAGACGCAG 57.921 61.111 0.00 0.00 0.00 5.18
4505 6038 3.121030 CAGCCTGCGAACGAAGGG 61.121 66.667 20.83 9.14 41.37 3.95
4516 6049 1.841302 AACGAAGGGCAGCATCCAGA 61.841 55.000 0.00 0.00 0.00 3.86
4517 6050 1.523258 CGAAGGGCAGCATCCAGAG 60.523 63.158 0.00 0.00 0.00 3.35
4520 6053 0.913451 AAGGGCAGCATCCAGAGTCT 60.913 55.000 0.00 0.00 0.00 3.24
4533 6066 1.139095 GAGTCTGGGAGTAACGCCG 59.861 63.158 0.00 0.00 0.00 6.46
4571 6104 0.251742 ATAGGCAGCAACAAGGGCAA 60.252 50.000 0.00 0.00 0.00 4.52
4589 6122 0.250727 AACCTCCACAATCCGGTGTG 60.251 55.000 16.33 16.33 46.98 3.82
4640 6174 5.050490 ACCGAAAAATATCAGAGATCCACG 58.950 41.667 0.00 0.00 0.00 4.94
4653 6187 1.680522 ATCCACGCCATCGCTTCTCT 61.681 55.000 0.00 0.00 39.84 3.10
4713 6252 2.001361 GCTTACCACCGCTCTCGCTA 62.001 60.000 0.00 0.00 0.00 4.26
4770 6310 4.889832 ATGTGTGAATAGCTAGCTTTGC 57.110 40.909 24.88 14.79 0.00 3.68
4802 6342 1.280142 CATAGCTCGTCGGACCTCG 59.720 63.158 1.91 0.00 40.90 4.63
4808 6348 1.374343 CTCGTCGGACCTCGGAATCA 61.374 60.000 1.91 0.00 39.77 2.57
4809 6349 0.750546 TCGTCGGACCTCGGAATCAT 60.751 55.000 1.91 0.00 39.77 2.45
4862 6402 2.105766 GATCTTCCTGGCCTTTGCATT 58.894 47.619 3.32 0.00 40.13 3.56
4944 6494 8.528044 AAAATACCTGGTTTCTTGAGTGTAAA 57.472 30.769 3.84 0.00 0.00 2.01
4945 6495 7.745620 AATACCTGGTTTCTTGAGTGTAAAG 57.254 36.000 3.84 0.00 0.00 1.85
4946 6496 3.883489 ACCTGGTTTCTTGAGTGTAAAGC 59.117 43.478 0.00 0.00 0.00 3.51
4947 6497 3.882888 CCTGGTTTCTTGAGTGTAAAGCA 59.117 43.478 0.00 0.00 38.03 3.91
4950 6500 6.206634 CCTGGTTTCTTGAGTGTAAAGCATTA 59.793 38.462 0.00 0.00 39.18 1.90
4951 6501 7.094205 CCTGGTTTCTTGAGTGTAAAGCATTAT 60.094 37.037 0.00 0.00 39.18 1.28
4952 6502 8.856153 TGGTTTCTTGAGTGTAAAGCATTATA 57.144 30.769 0.00 0.00 36.13 0.98
4953 6503 9.461312 TGGTTTCTTGAGTGTAAAGCATTATAT 57.539 29.630 0.00 0.00 36.13 0.86
4966 6516 9.535878 GTAAAGCATTATATATAGGTCTGAGCC 57.464 37.037 2.76 0.00 0.00 4.70
5009 6570 2.483106 CAGAGTGCAGAGATGGTTGTTG 59.517 50.000 0.00 0.00 0.00 3.33
5010 6571 2.105477 AGAGTGCAGAGATGGTTGTTGT 59.895 45.455 0.00 0.00 0.00 3.32
5011 6572 2.224606 AGTGCAGAGATGGTTGTTGTG 58.775 47.619 0.00 0.00 0.00 3.33
5012 6573 1.949525 GTGCAGAGATGGTTGTTGTGT 59.050 47.619 0.00 0.00 0.00 3.72
5014 6575 3.023119 TGCAGAGATGGTTGTTGTGTTT 58.977 40.909 0.00 0.00 0.00 2.83
5015 6576 3.446873 TGCAGAGATGGTTGTTGTGTTTT 59.553 39.130 0.00 0.00 0.00 2.43
5016 6577 4.642437 TGCAGAGATGGTTGTTGTGTTTTA 59.358 37.500 0.00 0.00 0.00 1.52
5017 6578 4.976116 GCAGAGATGGTTGTTGTGTTTTAC 59.024 41.667 0.00 0.00 0.00 2.01
5018 6579 5.221048 GCAGAGATGGTTGTTGTGTTTTACT 60.221 40.000 0.00 0.00 0.00 2.24
5019 6580 6.680378 GCAGAGATGGTTGTTGTGTTTTACTT 60.680 38.462 0.00 0.00 0.00 2.24
5020 6581 7.257722 CAGAGATGGTTGTTGTGTTTTACTTT 58.742 34.615 0.00 0.00 0.00 2.66
5021 6582 8.402472 CAGAGATGGTTGTTGTGTTTTACTTTA 58.598 33.333 0.00 0.00 0.00 1.85
5022 6583 8.403236 AGAGATGGTTGTTGTGTTTTACTTTAC 58.597 33.333 0.00 0.00 0.00 2.01
5023 6584 8.288689 AGATGGTTGTTGTGTTTTACTTTACT 57.711 30.769 0.00 0.00 0.00 2.24
5024 6585 8.403236 AGATGGTTGTTGTGTTTTACTTTACTC 58.597 33.333 0.00 0.00 0.00 2.59
5025 6586 6.854778 TGGTTGTTGTGTTTTACTTTACTCC 58.145 36.000 0.00 0.00 0.00 3.85
5028 6593 8.676401 GGTTGTTGTGTTTTACTTTACTCCTTA 58.324 33.333 0.00 0.00 0.00 2.69
5049 6614 7.512746 TCCTTAAGTAGCCACACAGGAATATAT 59.487 37.037 0.97 0.00 41.22 0.86
5050 6615 8.812972 CCTTAAGTAGCCACACAGGAATATATA 58.187 37.037 0.97 0.00 41.22 0.86
5062 6627 9.170890 ACACAGGAATATATAGGGAAATGAGAA 57.829 33.333 0.00 0.00 0.00 2.87
5110 6675 2.548057 TGCTTGTGAGAAGCTTTTACGG 59.452 45.455 15.53 0.00 43.38 4.02
5116 6681 4.933400 TGTGAGAAGCTTTTACGGATTACC 59.067 41.667 0.00 0.00 0.00 2.85
5134 6699 8.893727 CGGATTACCATTTTCTTAAAGAGTGAT 58.106 33.333 0.00 0.00 35.59 3.06
5163 6747 4.751767 AATGGGTGTGACACAATTTGTT 57.248 36.364 18.40 0.00 39.17 2.83
5172 6756 7.393327 GTGTGACACAATTTGTTTGAATTCAG 58.607 34.615 10.50 0.00 39.17 3.02
5173 6757 7.063308 GTGTGACACAATTTGTTTGAATTCAGT 59.937 33.333 10.50 0.00 39.17 3.41
5177 6774 6.183360 ACACAATTTGTTTGAATTCAGTGTGC 60.183 34.615 19.18 7.21 36.04 4.57
5239 6865 1.264288 CCAACTTCGTTCTGCAGGTTC 59.736 52.381 15.13 3.83 0.00 3.62
5240 6866 2.213499 CAACTTCGTTCTGCAGGTTCT 58.787 47.619 15.13 0.00 0.00 3.01
5241 6867 1.871080 ACTTCGTTCTGCAGGTTCTG 58.129 50.000 15.13 3.09 34.12 3.02
5260 6886 0.950555 GCTCTGTGCATCCGTGTTCA 60.951 55.000 0.00 0.00 42.31 3.18
5261 6887 1.073964 CTCTGTGCATCCGTGTTCAG 58.926 55.000 0.00 0.00 33.14 3.02
5274 6900 6.902224 TCCGTGTTCAGTTGTTCATATATG 57.098 37.500 6.36 6.36 0.00 1.78
5275 6901 6.403049 TCCGTGTTCAGTTGTTCATATATGT 58.597 36.000 12.42 0.00 0.00 2.29
5276 6902 7.548967 TCCGTGTTCAGTTGTTCATATATGTA 58.451 34.615 12.42 0.00 0.00 2.29
5277 6903 7.704899 TCCGTGTTCAGTTGTTCATATATGTAG 59.295 37.037 12.42 0.00 0.00 2.74
5278 6904 7.042725 CCGTGTTCAGTTGTTCATATATGTAGG 60.043 40.741 12.42 0.00 0.00 3.18
5279 6905 7.704899 CGTGTTCAGTTGTTCATATATGTAGGA 59.295 37.037 12.42 0.55 0.00 2.94
5280 6906 9.035607 GTGTTCAGTTGTTCATATATGTAGGAG 57.964 37.037 12.42 0.00 0.00 3.69
5281 6907 8.758829 TGTTCAGTTGTTCATATATGTAGGAGT 58.241 33.333 12.42 0.00 0.00 3.85
5284 6910 9.642343 TCAGTTGTTCATATATGTAGGAGTACT 57.358 33.333 12.42 0.00 0.00 2.73
5285 6911 9.900710 CAGTTGTTCATATATGTAGGAGTACTC 57.099 37.037 14.87 14.87 0.00 2.59
5301 6927 4.275810 AGTACTCCGTATGTGCTAAAGGA 58.724 43.478 0.00 0.00 0.00 3.36
5303 6929 4.060038 ACTCCGTATGTGCTAAAGGATG 57.940 45.455 0.00 0.00 0.00 3.51
5304 6930 2.802816 CTCCGTATGTGCTAAAGGATGC 59.197 50.000 0.00 0.00 0.00 3.91
5305 6931 2.169561 TCCGTATGTGCTAAAGGATGCA 59.830 45.455 0.00 0.00 36.79 3.96
5306 6932 2.942376 CCGTATGTGCTAAAGGATGCAA 59.058 45.455 0.00 0.00 41.10 4.08
5323 6949 5.289434 GGATGCAAGTAAATGTTTTAGCAGC 59.711 40.000 0.00 0.00 36.53 5.25
5325 6951 6.567687 TGCAAGTAAATGTTTTAGCAGCTA 57.432 33.333 0.00 0.00 0.00 3.32
5346 6972 4.935885 AGAAAGCATCATCAGAACGAAC 57.064 40.909 0.00 0.00 0.00 3.95
5347 6973 3.369147 AGAAAGCATCATCAGAACGAACG 59.631 43.478 0.00 0.00 0.00 3.95
5348 6974 2.654749 AGCATCATCAGAACGAACGA 57.345 45.000 0.14 0.00 0.00 3.85
5349 6975 2.959516 AGCATCATCAGAACGAACGAA 58.040 42.857 0.14 0.00 0.00 3.85
5350 6976 2.668457 AGCATCATCAGAACGAACGAAC 59.332 45.455 0.14 0.00 0.00 3.95
5351 6977 2.222819 GCATCATCAGAACGAACGAACC 60.223 50.000 0.14 0.00 0.00 3.62
5352 6978 2.804697 TCATCAGAACGAACGAACCA 57.195 45.000 0.14 0.00 0.00 3.67
5353 6979 3.100658 TCATCAGAACGAACGAACCAA 57.899 42.857 0.14 0.00 0.00 3.67
5354 6980 2.798283 TCATCAGAACGAACGAACCAAC 59.202 45.455 0.14 0.00 0.00 3.77
5355 6981 1.202203 TCAGAACGAACGAACCAACG 58.798 50.000 0.14 0.00 39.31 4.10
5356 6982 1.202203 CAGAACGAACGAACCAACGA 58.798 50.000 0.14 0.00 37.03 3.85
5357 6983 1.589320 CAGAACGAACGAACCAACGAA 59.411 47.619 0.14 0.00 37.03 3.85
5358 6984 1.589779 AGAACGAACGAACCAACGAAC 59.410 47.619 0.14 0.00 37.03 3.95
5359 6985 1.324134 GAACGAACGAACCAACGAACA 59.676 47.619 0.14 0.00 37.03 3.18
5360 6986 0.925466 ACGAACGAACCAACGAACAG 59.075 50.000 0.14 0.00 37.03 3.16
5361 6987 1.202203 CGAACGAACCAACGAACAGA 58.798 50.000 0.00 0.00 37.03 3.41
5362 6988 1.589320 CGAACGAACCAACGAACAGAA 59.411 47.619 0.00 0.00 37.03 3.02
5363 6989 2.220133 CGAACGAACCAACGAACAGAAT 59.780 45.455 0.00 0.00 37.03 2.40
5364 6990 3.426191 CGAACGAACCAACGAACAGAATA 59.574 43.478 0.00 0.00 37.03 1.75
5365 6991 4.662394 CGAACGAACCAACGAACAGAATAC 60.662 45.833 0.00 0.00 37.03 1.89
5366 6992 3.719924 ACGAACCAACGAACAGAATACA 58.280 40.909 0.00 0.00 37.03 2.29
5367 6993 3.492011 ACGAACCAACGAACAGAATACAC 59.508 43.478 0.00 0.00 37.03 2.90
5368 6994 3.491639 CGAACCAACGAACAGAATACACA 59.508 43.478 0.00 0.00 35.09 3.72
5369 6995 4.607557 CGAACCAACGAACAGAATACACAC 60.608 45.833 0.00 0.00 35.09 3.82
5370 6996 2.798283 ACCAACGAACAGAATACACACG 59.202 45.455 0.00 0.00 0.00 4.49
5371 6997 3.054166 CCAACGAACAGAATACACACGA 58.946 45.455 0.00 0.00 0.00 4.35
5372 6998 3.121126 CCAACGAACAGAATACACACGAC 60.121 47.826 0.00 0.00 0.00 4.34
5373 6999 2.313234 ACGAACAGAATACACACGACG 58.687 47.619 0.00 0.00 0.00 5.12
5374 7000 2.031769 ACGAACAGAATACACACGACGA 60.032 45.455 0.00 0.00 0.00 4.20
5375 7001 2.975193 CGAACAGAATACACACGACGAA 59.025 45.455 0.00 0.00 0.00 3.85
5376 7002 3.057739 CGAACAGAATACACACGACGAAG 59.942 47.826 0.00 0.00 0.00 3.79
5377 7003 3.909776 ACAGAATACACACGACGAAGA 57.090 42.857 0.00 0.00 0.00 2.87
5378 7004 3.562505 ACAGAATACACACGACGAAGAC 58.437 45.455 0.00 0.00 0.00 3.01
5379 7005 3.004002 ACAGAATACACACGACGAAGACA 59.996 43.478 0.00 0.00 0.00 3.41
5380 7006 4.166523 CAGAATACACACGACGAAGACAT 58.833 43.478 0.00 0.00 0.00 3.06
5381 7007 5.106436 ACAGAATACACACGACGAAGACATA 60.106 40.000 0.00 0.00 0.00 2.29
5382 7008 5.971792 CAGAATACACACGACGAAGACATAT 59.028 40.000 0.00 0.00 0.00 1.78
5383 7009 6.140895 CAGAATACACACGACGAAGACATATC 59.859 42.308 0.00 0.00 0.00 1.63
5384 7010 3.146618 ACACACGACGAAGACATATCC 57.853 47.619 0.00 0.00 0.00 2.59
5385 7011 2.490509 ACACACGACGAAGACATATCCA 59.509 45.455 0.00 0.00 0.00 3.41
5386 7012 3.108881 CACACGACGAAGACATATCCAG 58.891 50.000 0.00 0.00 0.00 3.86
5387 7013 2.120232 CACGACGAAGACATATCCAGC 58.880 52.381 0.00 0.00 0.00 4.85
5388 7014 1.749063 ACGACGAAGACATATCCAGCA 59.251 47.619 0.00 0.00 0.00 4.41
5389 7015 2.223595 ACGACGAAGACATATCCAGCAG 60.224 50.000 0.00 0.00 0.00 4.24
5402 7028 0.795085 CCAGCAGTGCTTCTTTCTCG 59.205 55.000 16.89 0.86 36.40 4.04
5404 7030 1.725706 CAGCAGTGCTTCTTTCTCGAG 59.274 52.381 16.89 5.93 36.40 4.04
5435 7061 2.708861 TCTGTTGCCTAGGGACAGAAAA 59.291 45.455 23.50 9.49 44.77 2.29
5436 7062 2.814336 CTGTTGCCTAGGGACAGAAAAC 59.186 50.000 20.63 9.58 42.54 2.43
5437 7063 2.173782 TGTTGCCTAGGGACAGAAAACA 59.826 45.455 11.72 4.93 0.00 2.83
5438 7064 2.552743 GTTGCCTAGGGACAGAAAACAC 59.447 50.000 11.72 0.00 0.00 3.32
5439 7065 1.270625 TGCCTAGGGACAGAAAACACG 60.271 52.381 11.72 0.00 0.00 4.49
5440 7066 1.001633 GCCTAGGGACAGAAAACACGA 59.998 52.381 11.72 0.00 0.00 4.35
5441 7067 2.354805 GCCTAGGGACAGAAAACACGAT 60.355 50.000 11.72 0.00 0.00 3.73
5442 7068 3.262420 CCTAGGGACAGAAAACACGATG 58.738 50.000 0.00 0.00 0.00 3.84
5443 7069 1.523758 AGGGACAGAAAACACGATGC 58.476 50.000 0.00 0.00 0.00 3.91
5444 7070 0.165944 GGGACAGAAAACACGATGCG 59.834 55.000 0.00 0.00 0.00 4.73
5445 7071 0.165944 GGACAGAAAACACGATGCGG 59.834 55.000 0.00 0.00 0.00 5.69
5446 7072 0.165944 GACAGAAAACACGATGCGGG 59.834 55.000 0.00 0.00 35.82 6.13
5447 7073 1.154225 CAGAAAACACGATGCGGGC 60.154 57.895 0.00 0.00 31.12 6.13
5448 7074 1.599518 AGAAAACACGATGCGGGCA 60.600 52.632 0.00 0.00 31.12 5.36
5449 7075 1.154225 GAAAACACGATGCGGGCAG 60.154 57.895 0.00 0.00 31.12 4.85
5450 7076 1.573829 GAAAACACGATGCGGGCAGA 61.574 55.000 0.00 0.00 31.12 4.26
5451 7077 1.169661 AAAACACGATGCGGGCAGAA 61.170 50.000 0.00 0.00 31.12 3.02
5452 7078 1.577328 AAACACGATGCGGGCAGAAG 61.577 55.000 0.00 0.00 31.12 2.85
5453 7079 2.125552 CACGATGCGGGCAGAAGA 60.126 61.111 0.00 0.00 0.00 2.87
5454 7080 1.741401 CACGATGCGGGCAGAAGAA 60.741 57.895 0.00 0.00 0.00 2.52
5455 7081 1.091771 CACGATGCGGGCAGAAGAAT 61.092 55.000 0.00 0.00 0.00 2.40
5456 7082 1.091771 ACGATGCGGGCAGAAGAATG 61.092 55.000 0.00 0.00 0.00 2.67
5457 7083 1.091771 CGATGCGGGCAGAAGAATGT 61.092 55.000 0.00 0.00 0.00 2.71
5458 7084 0.379669 GATGCGGGCAGAAGAATGTG 59.620 55.000 0.00 0.00 0.00 3.21
5459 7085 1.033746 ATGCGGGCAGAAGAATGTGG 61.034 55.000 0.00 0.00 0.00 4.17
5460 7086 1.675641 GCGGGCAGAAGAATGTGGT 60.676 57.895 0.00 0.00 0.00 4.16
5461 7087 1.926511 GCGGGCAGAAGAATGTGGTG 61.927 60.000 0.00 0.00 0.00 4.17
5462 7088 1.885871 GGGCAGAAGAATGTGGTGC 59.114 57.895 0.00 0.00 0.00 5.01
5463 7089 0.610232 GGGCAGAAGAATGTGGTGCT 60.610 55.000 0.00 0.00 34.46 4.40
5464 7090 0.524862 GGCAGAAGAATGTGGTGCTG 59.475 55.000 0.00 0.00 34.46 4.41
5465 7091 0.109412 GCAGAAGAATGTGGTGCTGC 60.109 55.000 0.00 0.00 41.38 5.25
5466 7092 0.167470 CAGAAGAATGTGGTGCTGCG 59.833 55.000 0.00 0.00 0.00 5.18
5467 7093 1.154150 GAAGAATGTGGTGCTGCGC 60.154 57.895 0.00 0.00 0.00 6.09
5468 7094 2.839324 GAAGAATGTGGTGCTGCGCG 62.839 60.000 0.00 0.00 0.00 6.86
5469 7095 4.465512 GAATGTGGTGCTGCGCGG 62.466 66.667 13.18 13.18 0.00 6.46
5502 7128 2.951745 CCGTCGCTTCGCTGCTAG 60.952 66.667 0.00 0.00 0.00 3.42
5503 7129 3.611792 CGTCGCTTCGCTGCTAGC 61.612 66.667 8.10 8.10 38.02 3.42
5504 7130 3.258290 GTCGCTTCGCTGCTAGCC 61.258 66.667 13.29 0.00 38.18 3.93
5505 7131 4.854784 TCGCTTCGCTGCTAGCCG 62.855 66.667 13.29 9.77 38.18 5.52
5507 7133 3.258290 GCTTCGCTGCTAGCCGTC 61.258 66.667 13.29 1.46 38.18 4.79
5508 7134 2.181777 CTTCGCTGCTAGCCGTCA 59.818 61.111 13.29 0.59 38.18 4.35
5509 7135 2.126071 TTCGCTGCTAGCCGTCAC 60.126 61.111 13.29 0.00 38.18 3.67
5510 7136 3.642778 TTCGCTGCTAGCCGTCACC 62.643 63.158 13.29 0.00 38.18 4.02
5511 7137 4.135153 CGCTGCTAGCCGTCACCT 62.135 66.667 13.29 0.00 38.18 4.00
5512 7138 2.202810 GCTGCTAGCCGTCACCTC 60.203 66.667 13.29 0.00 34.48 3.85
5513 7139 3.006756 GCTGCTAGCCGTCACCTCA 62.007 63.158 13.29 0.00 34.48 3.86
5514 7140 1.591703 CTGCTAGCCGTCACCTCAA 59.408 57.895 13.29 0.00 0.00 3.02
5515 7141 0.459237 CTGCTAGCCGTCACCTCAAG 60.459 60.000 13.29 0.00 0.00 3.02
5516 7142 1.185618 TGCTAGCCGTCACCTCAAGT 61.186 55.000 13.29 0.00 0.00 3.16
5518 7144 0.737715 CTAGCCGTCACCTCAAGTGC 60.738 60.000 0.00 0.00 46.81 4.40
5519 7145 2.167398 TAGCCGTCACCTCAAGTGCC 62.167 60.000 0.00 0.00 46.81 5.01
5522 7148 4.268687 GTCACCTCAAGTGCCGAG 57.731 61.111 0.00 0.00 46.81 4.63
5523 7149 2.029844 GTCACCTCAAGTGCCGAGC 61.030 63.158 0.00 0.00 46.81 5.03
5524 7150 2.031012 CACCTCAAGTGCCGAGCA 59.969 61.111 0.00 0.00 40.28 4.26
5525 7151 2.031516 CACCTCAAGTGCCGAGCAG 61.032 63.158 0.00 0.00 40.08 4.24
5526 7152 3.123620 CCTCAAGTGCCGAGCAGC 61.124 66.667 0.00 0.00 40.08 5.25
5527 7153 2.047465 CTCAAGTGCCGAGCAGCT 60.047 61.111 0.00 0.00 40.08 4.24
5528 7154 2.047844 TCAAGTGCCGAGCAGCTC 60.048 61.111 12.94 12.94 40.08 4.09
5537 7163 3.177920 GAGCAGCTCGAGCACACG 61.178 66.667 36.87 22.80 45.16 4.49
5543 7169 2.729491 CTCGAGCACACGCGTGAA 60.729 61.111 42.94 19.55 46.80 3.18
5544 7170 2.278923 TCGAGCACACGCGTGAAA 60.279 55.556 42.94 18.83 46.80 2.69
5545 7171 1.817217 CTCGAGCACACGCGTGAAAA 61.817 55.000 42.94 20.52 46.80 2.29
5546 7172 1.011684 CGAGCACACGCGTGAAAAA 60.012 52.632 42.94 0.00 46.80 1.94
5547 7173 1.253044 CGAGCACACGCGTGAAAAAC 61.253 55.000 42.94 26.03 46.80 2.43
5548 7174 0.027586 GAGCACACGCGTGAAAAACT 59.972 50.000 42.94 28.96 46.80 2.66
5549 7175 1.259507 GAGCACACGCGTGAAAAACTA 59.740 47.619 42.94 0.00 46.80 2.24
5550 7176 1.004292 AGCACACGCGTGAAAAACTAC 60.004 47.619 42.94 21.44 46.80 2.73
5551 7177 1.267632 GCACACGCGTGAAAAACTACA 60.268 47.619 42.94 0.00 46.80 2.74
5552 7178 2.788407 GCACACGCGTGAAAAACTACAA 60.788 45.455 42.94 0.00 46.80 2.41
5553 7179 3.418094 CACACGCGTGAAAAACTACAAA 58.582 40.909 42.94 0.00 46.80 2.83
5554 7180 4.032355 CACACGCGTGAAAAACTACAAAT 58.968 39.130 42.94 15.22 46.80 2.32
5555 7181 4.144051 CACACGCGTGAAAAACTACAAATC 59.856 41.667 42.94 0.00 46.80 2.17
5556 7182 4.034742 ACACGCGTGAAAAACTACAAATCT 59.965 37.500 42.94 14.05 0.00 2.40
5557 7183 4.375698 CACGCGTGAAAAACTACAAATCTG 59.624 41.667 34.93 0.00 0.00 2.90
5558 7184 3.906008 CGCGTGAAAAACTACAAATCTGG 59.094 43.478 0.00 0.00 0.00 3.86
5559 7185 3.668656 GCGTGAAAAACTACAAATCTGGC 59.331 43.478 0.00 0.00 0.00 4.85
5560 7186 4.226761 CGTGAAAAACTACAAATCTGGCC 58.773 43.478 0.00 0.00 0.00 5.36
5561 7187 4.556233 GTGAAAAACTACAAATCTGGCCC 58.444 43.478 0.00 0.00 0.00 5.80
5562 7188 4.280929 GTGAAAAACTACAAATCTGGCCCT 59.719 41.667 0.00 0.00 0.00 5.19
5563 7189 4.898861 TGAAAAACTACAAATCTGGCCCTT 59.101 37.500 0.00 0.00 0.00 3.95
5564 7190 5.365314 TGAAAAACTACAAATCTGGCCCTTT 59.635 36.000 0.00 0.00 0.00 3.11
5565 7191 4.871933 AAACTACAAATCTGGCCCTTTG 57.128 40.909 16.67 16.67 38.13 2.77
5566 7192 3.806949 ACTACAAATCTGGCCCTTTGA 57.193 42.857 22.29 8.08 36.19 2.69
5567 7193 3.421844 ACTACAAATCTGGCCCTTTGAC 58.578 45.455 22.29 0.00 36.19 3.18
5568 7194 1.632589 ACAAATCTGGCCCTTTGACC 58.367 50.000 22.29 0.00 36.19 4.02
5569 7195 1.133199 ACAAATCTGGCCCTTTGACCA 60.133 47.619 22.29 0.00 36.19 4.02
5570 7196 1.969923 CAAATCTGGCCCTTTGACCAA 59.030 47.619 14.26 0.00 34.96 3.67
5571 7197 2.368221 CAAATCTGGCCCTTTGACCAAA 59.632 45.455 14.26 0.00 34.96 3.28
5572 7198 1.632589 ATCTGGCCCTTTGACCAAAC 58.367 50.000 0.00 0.00 34.96 2.93
5573 7199 0.555769 TCTGGCCCTTTGACCAAACT 59.444 50.000 0.00 0.00 34.96 2.66
5574 7200 1.063266 TCTGGCCCTTTGACCAAACTT 60.063 47.619 0.00 0.00 34.96 2.66
5575 7201 1.341209 CTGGCCCTTTGACCAAACTTC 59.659 52.381 0.00 0.00 34.96 3.01
5576 7202 1.342474 TGGCCCTTTGACCAAACTTCA 60.342 47.619 0.00 0.00 31.46 3.02
5577 7203 1.341209 GGCCCTTTGACCAAACTTCAG 59.659 52.381 0.00 0.00 0.00 3.02
5578 7204 1.269778 GCCCTTTGACCAAACTTCAGC 60.270 52.381 0.00 0.00 0.00 4.26
5579 7205 2.031120 CCCTTTGACCAAACTTCAGCA 58.969 47.619 0.00 0.00 0.00 4.41
5580 7206 2.629617 CCCTTTGACCAAACTTCAGCAT 59.370 45.455 0.00 0.00 0.00 3.79
5581 7207 3.553508 CCCTTTGACCAAACTTCAGCATG 60.554 47.826 0.00 0.00 37.54 4.06
5593 7219 1.588239 TCAGCATGAATGACCCTCCT 58.412 50.000 0.00 0.00 45.97 3.69
5594 7220 1.918262 TCAGCATGAATGACCCTCCTT 59.082 47.619 0.00 0.00 45.97 3.36
5595 7221 2.309755 TCAGCATGAATGACCCTCCTTT 59.690 45.455 0.00 0.00 45.97 3.11
5596 7222 3.523157 TCAGCATGAATGACCCTCCTTTA 59.477 43.478 0.00 0.00 45.97 1.85
5597 7223 4.018506 TCAGCATGAATGACCCTCCTTTAA 60.019 41.667 0.00 0.00 45.97 1.52
5598 7224 4.706476 CAGCATGAATGACCCTCCTTTAAA 59.294 41.667 0.00 0.00 39.69 1.52
5599 7225 5.185635 CAGCATGAATGACCCTCCTTTAAAA 59.814 40.000 0.00 0.00 39.69 1.52
5600 7226 5.779771 AGCATGAATGACCCTCCTTTAAAAA 59.220 36.000 0.00 0.00 0.00 1.94
5601 7227 6.441604 AGCATGAATGACCCTCCTTTAAAAAT 59.558 34.615 0.00 0.00 0.00 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.183361 ACCATAATCTAGTGACCGGAGTAGTA 60.183 42.308 9.46 0.00 0.00 1.82
1 2 5.071370 CCATAATCTAGTGACCGGAGTAGT 58.929 45.833 9.46 0.00 0.00 2.73
2 3 5.071370 ACCATAATCTAGTGACCGGAGTAG 58.929 45.833 9.46 3.18 0.00 2.57
3 4 5.057843 ACCATAATCTAGTGACCGGAGTA 57.942 43.478 9.46 0.00 0.00 2.59
4 5 3.890147 GACCATAATCTAGTGACCGGAGT 59.110 47.826 9.46 0.00 0.00 3.85
5 6 3.058155 CGACCATAATCTAGTGACCGGAG 60.058 52.174 9.46 0.00 0.00 4.63
6 7 2.882761 CGACCATAATCTAGTGACCGGA 59.117 50.000 9.46 0.00 0.00 5.14
7 8 2.607282 GCGACCATAATCTAGTGACCGG 60.607 54.545 0.00 0.00 0.00 5.28
8 9 2.293677 AGCGACCATAATCTAGTGACCG 59.706 50.000 0.00 0.00 0.00 4.79
9 10 3.609644 CGAGCGACCATAATCTAGTGACC 60.610 52.174 0.00 0.00 0.00 4.02
10 11 3.556513 CGAGCGACCATAATCTAGTGAC 58.443 50.000 0.00 0.00 0.00 3.67
11 12 2.552743 CCGAGCGACCATAATCTAGTGA 59.447 50.000 0.00 0.00 0.00 3.41
12 13 2.552743 TCCGAGCGACCATAATCTAGTG 59.447 50.000 0.00 0.00 0.00 2.74
13 14 2.553172 GTCCGAGCGACCATAATCTAGT 59.447 50.000 0.00 0.00 35.23 2.57
14 15 2.412977 CGTCCGAGCGACCATAATCTAG 60.413 54.545 0.00 0.00 38.36 2.43
15 16 1.534163 CGTCCGAGCGACCATAATCTA 59.466 52.381 0.00 0.00 38.36 1.98
16 17 0.311165 CGTCCGAGCGACCATAATCT 59.689 55.000 0.00 0.00 38.36 2.40
17 18 1.276145 GCGTCCGAGCGACCATAATC 61.276 60.000 2.92 0.00 38.36 1.75
18 19 1.299926 GCGTCCGAGCGACCATAAT 60.300 57.895 2.92 0.00 38.36 1.28
19 20 2.103538 GCGTCCGAGCGACCATAA 59.896 61.111 2.92 0.00 38.36 1.90
20 21 3.896133 GGCGTCCGAGCGACCATA 61.896 66.667 2.92 0.00 38.36 2.74
32 33 3.039588 TTCTTGAACGGCGGCGTC 61.040 61.111 37.44 27.78 0.00 5.19
33 34 3.343421 GTTCTTGAACGGCGGCGT 61.343 61.111 32.71 32.71 0.00 5.68
34 35 4.424430 CGTTCTTGAACGGCGGCG 62.424 66.667 31.06 31.06 42.03 6.46
40 41 4.424430 CGCCGCCGTTCTTGAACG 62.424 66.667 23.80 23.80 45.04 3.95
41 42 4.736631 GCGCCGCCGTTCTTGAAC 62.737 66.667 0.00 3.60 36.67 3.18
99 100 2.253452 GGATCGCAATCGCATGGC 59.747 61.111 0.00 0.00 38.40 4.40
100 101 2.552768 CGGATCGCAATCGCATGG 59.447 61.111 0.00 0.00 38.40 3.66
178 183 1.373570 GAGAAATCCTTGGACCGCTG 58.626 55.000 0.00 0.00 0.00 5.18
279 299 2.261671 CGCGGTCTGTAGCCTGTT 59.738 61.111 0.00 0.00 0.00 3.16
348 755 5.182950 AGTGGATTGTGCAACGATAATTCAA 59.817 36.000 0.00 0.00 42.24 2.69
375 785 1.413767 CGTCAAATCTCGGAGCCACG 61.414 60.000 0.00 0.50 0.00 4.94
399 809 3.549625 GGTTGGGTTCGTAGACTATAGCG 60.550 52.174 0.00 0.00 34.32 4.26
408 818 2.413837 CACTCAAGGTTGGGTTCGTAG 58.586 52.381 0.00 0.00 39.25 3.51
417 835 4.821805 AGTATTGTTGTCCACTCAAGGTTG 59.178 41.667 0.00 0.00 0.00 3.77
433 851 7.713507 CAGAGAGAGTAGTACTGCTAGTATTGT 59.286 40.741 13.91 0.00 32.65 2.71
434 852 7.307751 GCAGAGAGAGTAGTACTGCTAGTATTG 60.308 44.444 13.91 10.72 46.66 1.90
487 908 4.123497 TGCAATGTATTGTAGTCGAGCT 57.877 40.909 6.48 0.00 39.88 4.09
488 909 5.409643 AATGCAATGTATTGTAGTCGAGC 57.590 39.130 6.48 0.00 39.88 5.03
489 910 8.864024 CCTATAATGCAATGTATTGTAGTCGAG 58.136 37.037 19.92 7.05 39.88 4.04
504 925 4.462132 TGAAGCAAGCAACCTATAATGCAA 59.538 37.500 0.00 0.00 44.95 4.08
506 927 4.336433 TCTGAAGCAAGCAACCTATAATGC 59.664 41.667 0.00 0.00 42.87 3.56
508 929 6.830324 TCATTCTGAAGCAAGCAACCTATAAT 59.170 34.615 0.00 0.00 0.00 1.28
509 930 6.179756 TCATTCTGAAGCAAGCAACCTATAA 58.820 36.000 0.00 0.00 0.00 0.98
525 947 6.103997 GGTTGTACGTATTCCTTCATTCTGA 58.896 40.000 0.00 0.00 0.00 3.27
547 973 1.404391 CTCATAAGTACAGTCGCGGGT 59.596 52.381 6.13 5.15 0.00 5.28
555 981 4.733850 TCAGAACGTGCTCATAAGTACAG 58.266 43.478 0.00 0.00 37.94 2.74
556 982 4.776795 TCAGAACGTGCTCATAAGTACA 57.223 40.909 0.00 0.00 37.94 2.90
565 991 1.523095 GACACTGTTCAGAACGTGCTC 59.477 52.381 25.37 20.07 38.53 4.26
567 993 1.286501 TGACACTGTTCAGAACGTGC 58.713 50.000 25.37 20.47 38.53 5.34
569 995 3.179443 ACATGACACTGTTCAGAACGT 57.821 42.857 8.80 6.85 0.00 3.99
570 996 4.299155 AGTACATGACACTGTTCAGAACG 58.701 43.478 8.80 6.25 0.00 3.95
571 997 5.533482 AGAGTACATGACACTGTTCAGAAC 58.467 41.667 6.32 6.32 0.00 3.01
572 998 5.791336 AGAGTACATGACACTGTTCAGAA 57.209 39.130 0.00 0.00 0.00 3.02
573 999 5.279006 GGAAGAGTACATGACACTGTTCAGA 60.279 44.000 26.94 0.00 44.14 3.27
574 1000 4.926238 GGAAGAGTACATGACACTGTTCAG 59.074 45.833 26.94 0.00 44.14 3.02
626 1056 6.030228 CCTAAGCGGCAATCTTTCTTTAAAG 58.970 40.000 9.04 9.04 42.99 1.85
644 1074 3.437049 CAGCAACCAAACTACTCCTAAGC 59.563 47.826 0.00 0.00 0.00 3.09
646 1076 4.347000 AGTCAGCAACCAAACTACTCCTAA 59.653 41.667 0.00 0.00 0.00 2.69
649 1079 2.808543 CAGTCAGCAACCAAACTACTCC 59.191 50.000 0.00 0.00 0.00 3.85
651 1081 2.222027 GCAGTCAGCAACCAAACTACT 58.778 47.619 0.00 0.00 44.79 2.57
652 1082 2.688364 GCAGTCAGCAACCAAACTAC 57.312 50.000 0.00 0.00 44.79 2.73
660 1264 8.844812 CAGAAAAAGTCTCAGCAGTCAGCAAC 62.845 46.154 0.00 0.00 39.52 4.17
672 1276 6.878923 TGTCTCAGAAAACAGAAAAAGTCTCA 59.121 34.615 0.00 0.00 32.70 3.27
690 1294 0.595095 GGCAGGCAAACTTGTCTCAG 59.405 55.000 0.00 0.00 42.08 3.35
692 1296 0.884704 TCGGCAGGCAAACTTGTCTC 60.885 55.000 0.00 0.00 42.08 3.36
697 1301 0.603975 GACTCTCGGCAGGCAAACTT 60.604 55.000 0.00 0.00 0.00 2.66
705 1309 2.407210 GCTCTCGACTCTCGGCAG 59.593 66.667 0.00 0.00 40.88 4.85
708 1312 1.487452 CTCTCGCTCTCGACTCTCGG 61.487 65.000 0.00 0.00 40.88 4.63
709 1313 1.487452 CCTCTCGCTCTCGACTCTCG 61.487 65.000 0.00 0.00 40.21 4.04
714 1318 2.766400 CCCACCTCTCGCTCTCGAC 61.766 68.421 0.00 0.00 40.21 4.20
716 1320 2.752238 ACCCACCTCTCGCTCTCG 60.752 66.667 0.00 0.00 0.00 4.04
727 1331 4.204028 AGCCACCACACACCCACC 62.204 66.667 0.00 0.00 0.00 4.61
728 1332 1.764571 TAGAGCCACCACACACCCAC 61.765 60.000 0.00 0.00 0.00 4.61
729 1333 1.460497 TAGAGCCACCACACACCCA 60.460 57.895 0.00 0.00 0.00 4.51
730 1334 1.296715 CTAGAGCCACCACACACCC 59.703 63.158 0.00 0.00 0.00 4.61
732 1336 2.256117 AAACTAGAGCCACCACACAC 57.744 50.000 0.00 0.00 0.00 3.82
733 1337 2.438021 AGAAAACTAGAGCCACCACACA 59.562 45.455 0.00 0.00 0.00 3.72
737 1341 2.631062 TCGAAGAAAACTAGAGCCACCA 59.369 45.455 0.00 0.00 0.00 4.17
746 1351 8.037166 GGGTTTCCTACTTATCGAAGAAAACTA 58.963 37.037 0.00 0.00 43.58 2.24
747 1352 6.877855 GGGTTTCCTACTTATCGAAGAAAACT 59.122 38.462 0.00 0.00 43.58 2.66
754 1359 3.382546 CCTCGGGTTTCCTACTTATCGAA 59.617 47.826 0.00 0.00 0.00 3.71
779 1384 0.317160 CGGCCCCTTTTTCCTGTTTC 59.683 55.000 0.00 0.00 0.00 2.78
783 1388 3.381983 GGCGGCCCCTTTTTCCTG 61.382 66.667 8.12 0.00 0.00 3.86
907 1523 1.066430 CGAATCGTGGGGAAGGAAAGA 60.066 52.381 0.00 0.00 0.00 2.52
909 1525 0.688487 ACGAATCGTGGGGAAGGAAA 59.312 50.000 7.77 0.00 39.18 3.13
910 1526 0.248289 GACGAATCGTGGGGAAGGAA 59.752 55.000 14.87 0.00 41.37 3.36
940 1556 4.889112 AGCGAGACGGGGGCGATA 62.889 66.667 0.00 0.00 0.00 2.92
1087 1724 0.605589 AAAGCAACGGAGGTAGTGGC 60.606 55.000 0.00 0.00 38.77 5.01
1227 1879 1.396996 GAGCAGGCGAAATTAAGCGAA 59.603 47.619 0.00 0.00 0.00 4.70
1231 1883 1.064654 GCAGGAGCAGGCGAAATTAAG 59.935 52.381 0.00 0.00 41.58 1.85
1253 1911 4.212913 GCTCGCATCTCCCGCTGA 62.213 66.667 0.00 0.00 0.00 4.26
1254 1912 3.729965 AAGCTCGCATCTCCCGCTG 62.730 63.158 0.00 0.00 0.00 5.18
1255 1913 3.438017 GAAGCTCGCATCTCCCGCT 62.438 63.158 0.00 0.00 0.00 5.52
1256 1914 2.964389 GAAGCTCGCATCTCCCGC 60.964 66.667 0.00 0.00 0.00 6.13
1380 2073 0.467290 TGAGGAAAGCCGCTTTGGTT 60.467 50.000 22.93 7.93 41.21 3.67
1534 2230 1.498865 CGAGCAAGCCGTTTCAGTGT 61.499 55.000 0.00 0.00 0.00 3.55
1579 2275 4.568359 ACAGCTAACTATGCAGAACAATCG 59.432 41.667 0.00 0.00 0.00 3.34
1587 2283 7.012704 ACAATTTATCCACAGCTAACTATGCAG 59.987 37.037 0.00 0.00 0.00 4.41
1638 2339 4.559153 GCAACAATGTATCCAGCTGTTTT 58.441 39.130 13.81 0.00 31.59 2.43
1639 2340 3.056607 GGCAACAATGTATCCAGCTGTTT 60.057 43.478 13.81 1.63 31.59 2.83
1640 2341 2.493278 GGCAACAATGTATCCAGCTGTT 59.507 45.455 13.81 2.03 33.24 3.16
1641 2342 2.094675 GGCAACAATGTATCCAGCTGT 58.905 47.619 13.81 0.00 0.00 4.40
1645 2346 4.780815 TCCTAAGGCAACAATGTATCCAG 58.219 43.478 6.61 0.00 41.41 3.86
1669 2370 2.557920 AACTGAAAGCTGGTCCTCTG 57.442 50.000 0.00 0.00 37.60 3.35
1749 3066 2.501316 CACCATGACCCATGAGTCTACA 59.499 50.000 8.95 0.00 43.81 2.74
1898 3215 3.306641 GCTCAGGGCACTCATCTTATAGG 60.307 52.174 0.00 0.00 41.35 2.57
1977 3294 8.543774 ACTAATGGAATAGAAAGAAGAGCAAGA 58.456 33.333 0.00 0.00 0.00 3.02
2025 3343 3.120199 CCTACATGGTCAAGCAAAGAACG 60.120 47.826 0.00 0.00 0.00 3.95
2048 3366 2.420642 CAGTGTCATCCTGGTCTTGTG 58.579 52.381 0.00 0.00 0.00 3.33
2052 3370 1.557269 GGGCAGTGTCATCCTGGTCT 61.557 60.000 0.00 0.00 0.00 3.85
2086 3404 1.906994 TTTGGCCGTCGCGAATTCTG 61.907 55.000 12.06 0.00 32.32 3.02
2088 3406 1.511254 GTTTGGCCGTCGCGAATTC 60.511 57.895 12.06 1.74 32.32 2.17
2098 3416 0.103937 TGCAAAGAAAGGTTTGGCCG 59.896 50.000 0.00 0.00 43.70 6.13
2235 3553 4.057406 ACTCTGCTGCTTGATAGATGAC 57.943 45.455 0.00 0.00 0.00 3.06
2333 3651 3.849574 TCCTGGTTGAGTTGGATTATCCA 59.150 43.478 10.29 10.29 46.61 3.41
2334 3652 4.503714 TCCTGGTTGAGTTGGATTATCC 57.496 45.455 3.91 3.91 36.96 2.59
2367 3685 7.519008 GCCGATAATGAGTTAATGACCTTTCTG 60.519 40.741 0.00 0.00 0.00 3.02
2484 3805 9.884636 ACAGCAGAAAATATGTATGTACTTACA 57.115 29.630 20.22 20.22 40.98 2.41
2546 3867 0.779997 ACCTCATTTCCAACTGGCCT 59.220 50.000 3.32 0.00 34.44 5.19
2565 3886 5.522456 CAATTTGCTTAAGACAGTGCAAGA 58.478 37.500 6.67 0.00 44.52 3.02
2618 3941 9.891828 GTTTCTGACAACATCATAAAACATACA 57.108 29.630 8.83 0.00 39.91 2.29
2694 4017 5.063880 GCTCTCCTCAAACTCCTGTTTTTA 58.936 41.667 0.00 0.00 43.13 1.52
2725 4048 0.250234 ATCACACGGATGACACCCAG 59.750 55.000 0.00 0.00 34.06 4.45
2783 4106 6.770303 TGTTTCTTCAATGACATCAGTTGGTA 59.230 34.615 0.00 0.00 0.00 3.25
2810 4133 8.842280 AGATTTAAAGAGAGTAGATACCGTCAG 58.158 37.037 0.00 0.00 0.00 3.51
2834 4157 9.096823 TGGTCTAAGAAAATACCAGAGTAAAGA 57.903 33.333 0.00 0.00 37.09 2.52
2852 4175 3.501062 GGAAGGAAACGGTTTGGTCTAAG 59.499 47.826 11.43 0.00 0.00 2.18
2875 4198 3.256558 GGAATGAACAAATGCTGCTTCC 58.743 45.455 0.00 0.00 0.00 3.46
2906 4230 2.182827 CTCCATCTTCAGGACCTGACA 58.817 52.381 24.24 13.83 40.46 3.58
2994 4318 3.503748 AGCTGCACTCCATTTTAAGTGTC 59.496 43.478 1.02 0.00 43.82 3.67
3133 4457 3.262420 CGGTTTGAGTCGGAATTCTCAT 58.738 45.455 5.23 0.00 39.85 2.90
3210 4534 6.789262 ACCAAATTATTCTCTCAAGCATTCG 58.211 36.000 0.00 0.00 0.00 3.34
3245 4569 8.763601 AGATAGCATTGAACCTAAAAGTACTCT 58.236 33.333 0.00 0.00 0.00 3.24
3295 4619 3.568007 GTGCACATAACCAGGAGAAAACA 59.432 43.478 13.17 0.00 0.00 2.83
3296 4620 3.821033 AGTGCACATAACCAGGAGAAAAC 59.179 43.478 21.04 0.00 0.00 2.43
3404 4758 6.780706 AAAACGCTCTTATATTATGGGACG 57.219 37.500 0.00 0.00 0.00 4.79
3432 4786 4.690122 AGCGTTTTTCACACTAGTGTAGT 58.310 39.130 27.48 3.18 46.01 2.73
3433 4787 4.982916 AGAGCGTTTTTCACACTAGTGTAG 59.017 41.667 27.48 20.38 46.01 2.74
3435 4789 3.793559 AGAGCGTTTTTCACACTAGTGT 58.206 40.909 22.95 22.95 46.01 3.55
3444 4798 7.414436 GTGCCATAATATAAGAGCGTTTTTCA 58.586 34.615 0.00 0.00 0.00 2.69
3445 4799 6.573725 CGTGCCATAATATAAGAGCGTTTTTC 59.426 38.462 0.00 0.00 0.00 2.29
3446 4800 6.427150 CGTGCCATAATATAAGAGCGTTTTT 58.573 36.000 0.00 0.00 0.00 1.94
3451 4885 3.845178 TCCGTGCCATAATATAAGAGCG 58.155 45.455 0.00 0.00 0.00 5.03
3453 4887 4.466370 TCCCTCCGTGCCATAATATAAGAG 59.534 45.833 0.00 0.00 0.00 2.85
3454 4888 4.422057 TCCCTCCGTGCCATAATATAAGA 58.578 43.478 0.00 0.00 0.00 2.10
3456 4890 4.164981 ACTCCCTCCGTGCCATAATATAA 58.835 43.478 0.00 0.00 0.00 0.98
3457 4891 3.786553 ACTCCCTCCGTGCCATAATATA 58.213 45.455 0.00 0.00 0.00 0.86
3463 4897 0.325296 TTCTACTCCCTCCGTGCCAT 60.325 55.000 0.00 0.00 0.00 4.40
3464 4898 0.543410 TTTCTACTCCCTCCGTGCCA 60.543 55.000 0.00 0.00 0.00 4.92
3467 4901 2.931320 GCTGTTTTCTACTCCCTCCGTG 60.931 54.545 0.00 0.00 0.00 4.94
3470 4904 3.418684 TTGCTGTTTTCTACTCCCTCC 57.581 47.619 0.00 0.00 0.00 4.30
3480 4914 9.362539 ACTCATCAATCAATATTTGCTGTTTTC 57.637 29.630 0.00 0.00 0.00 2.29
3481 4915 9.715121 AACTCATCAATCAATATTTGCTGTTTT 57.285 25.926 0.00 0.00 0.00 2.43
3482 4916 9.715121 AAACTCATCAATCAATATTTGCTGTTT 57.285 25.926 0.00 0.00 0.00 2.83
3483 4917 9.146984 CAAACTCATCAATCAATATTTGCTGTT 57.853 29.630 0.00 0.00 0.00 3.16
3484 4918 7.277098 GCAAACTCATCAATCAATATTTGCTGT 59.723 33.333 10.28 0.00 44.46 4.40
3485 4919 7.276878 TGCAAACTCATCAATCAATATTTGCTG 59.723 33.333 16.52 0.00 46.72 4.41
3486 4920 7.324935 TGCAAACTCATCAATCAATATTTGCT 58.675 30.769 16.52 0.00 46.72 3.91
3487 4921 7.528481 TGCAAACTCATCAATCAATATTTGC 57.472 32.000 10.56 10.56 46.76 3.68
3488 4922 9.093970 ACATGCAAACTCATCAATCAATATTTG 57.906 29.630 0.00 0.00 0.00 2.32
3593 5027 6.927294 AGTTGTTCCAAGAAACAGAAGTAG 57.073 37.500 0.00 0.00 40.08 2.57
3677 5113 2.260844 TGGCTTTCACAGAACTGGAG 57.739 50.000 6.76 0.00 34.19 3.86
3840 5276 3.327464 ACAGTAGCAAAAATGGCCCAAAT 59.673 39.130 0.00 0.00 0.00 2.32
3928 5449 1.335810 ACTGCATGCACAACACTGAAG 59.664 47.619 18.46 5.44 0.00 3.02
3940 5461 2.798976 TTTGGTCTTTCACTGCATGC 57.201 45.000 11.82 11.82 0.00 4.06
3941 5462 5.535333 AGAATTTTGGTCTTTCACTGCATG 58.465 37.500 0.00 0.00 0.00 4.06
3971 5492 3.343941 AATTGGAAGGCGCAGTAGTAA 57.656 42.857 10.83 0.00 0.00 2.24
3972 5493 3.055385 AGAAATTGGAAGGCGCAGTAGTA 60.055 43.478 10.83 0.00 0.00 1.82
4044 5565 6.317642 TGTGCCACCATTGACACTTAATATAC 59.682 38.462 0.00 0.00 34.14 1.47
4049 5570 2.937519 TGTGCCACCATTGACACTTAA 58.062 42.857 0.00 0.00 34.14 1.85
4103 5631 5.753721 AAATAACCCTAAGCAAATTGGCA 57.246 34.783 7.75 0.00 35.83 4.92
4182 5712 2.310779 AGGTAGCTCTTGGTCACTGA 57.689 50.000 0.00 0.00 0.00 3.41
4262 5792 2.642311 TGGGAAGAAGCTTCATACCACA 59.358 45.455 27.96 20.49 0.00 4.17
4335 5865 5.820423 TCACTTTTAGCTGCAAGTTTAGTGA 59.180 36.000 9.14 9.83 36.93 3.41
4437 5967 1.622811 CCTAGATCTCCACCTCATGCC 59.377 57.143 0.00 0.00 0.00 4.40
4454 5984 0.755698 CTAACCGCTGGCTCCTCCTA 60.756 60.000 0.00 0.00 35.26 2.94
4466 5999 2.126071 TGCGTCTGAGCTAACCGC 60.126 61.111 11.29 11.29 44.27 5.68
4484 6017 4.742201 TCGTTCGCAGGCTGAGGC 62.742 66.667 20.86 10.87 37.82 4.70
4516 6049 1.605738 ACGGCGTTACTCCCAGACT 60.606 57.895 6.77 0.00 0.00 3.24
4517 6050 1.445582 CACGGCGTTACTCCCAGAC 60.446 63.158 11.19 0.00 0.00 3.51
4520 6053 2.967397 CTCACGGCGTTACTCCCA 59.033 61.111 11.19 0.00 0.00 4.37
4533 6066 2.049063 ACCGCTGTTCTCGCTCAC 60.049 61.111 0.00 0.00 0.00 3.51
4571 6104 1.374947 CACACCGGATTGTGGAGGT 59.625 57.895 9.46 0.00 42.79 3.85
4589 6122 2.133553 CTGGATGATCAGACGATGTGC 58.866 52.381 0.09 0.00 36.93 4.57
4713 6252 3.265791 GTCTTGATCTGCAGAAACCGAT 58.734 45.455 22.50 1.97 0.00 4.18
4770 6310 1.336440 AGCTATGTCTACTGCGCAGAG 59.664 52.381 42.03 30.95 0.00 3.35
4783 6323 1.437772 CGAGGTCCGACGAGCTATGT 61.438 60.000 0.00 0.00 46.79 2.29
4802 6342 6.899393 TTCTTGCCACCATTATATGATTCC 57.101 37.500 0.00 0.00 0.00 3.01
4808 6348 9.672673 GTGTATCTATTCTTGCCACCATTATAT 57.327 33.333 0.00 0.00 0.00 0.86
4809 6349 7.817478 CGTGTATCTATTCTTGCCACCATTATA 59.183 37.037 0.00 0.00 0.00 0.98
4862 6402 2.677524 GCATGTTGCCTGCCTCCA 60.678 61.111 0.00 0.00 37.42 3.86
4944 6494 8.061920 TGTAGGCTCAGACCTATATATAATGCT 58.938 37.037 0.00 0.00 44.08 3.79
4945 6495 8.239038 TGTAGGCTCAGACCTATATATAATGC 57.761 38.462 0.00 0.00 44.08 3.56
4950 6500 9.326489 TGATTTTGTAGGCTCAGACCTATATAT 57.674 33.333 0.00 0.00 44.08 0.86
4951 6501 8.585881 GTGATTTTGTAGGCTCAGACCTATATA 58.414 37.037 0.00 0.00 44.08 0.86
4952 6502 7.071196 TGTGATTTTGTAGGCTCAGACCTATAT 59.929 37.037 0.00 0.00 44.08 0.86
4953 6503 6.382859 TGTGATTTTGTAGGCTCAGACCTATA 59.617 38.462 0.00 0.00 44.08 1.31
4954 6504 5.189736 TGTGATTTTGTAGGCTCAGACCTAT 59.810 40.000 0.00 0.00 44.08 2.57
4955 6505 4.530553 TGTGATTTTGTAGGCTCAGACCTA 59.469 41.667 0.00 0.00 41.50 3.08
4956 6506 3.327757 TGTGATTTTGTAGGCTCAGACCT 59.672 43.478 0.00 0.00 44.31 3.85
4957 6507 3.437049 GTGTGATTTTGTAGGCTCAGACC 59.563 47.826 0.00 0.00 0.00 3.85
4958 6508 3.437049 GGTGTGATTTTGTAGGCTCAGAC 59.563 47.826 0.00 0.00 32.74 3.51
4959 6509 3.072330 TGGTGTGATTTTGTAGGCTCAGA 59.928 43.478 0.00 0.00 0.00 3.27
4960 6510 3.411446 TGGTGTGATTTTGTAGGCTCAG 58.589 45.455 0.00 0.00 0.00 3.35
4961 6511 3.072330 TCTGGTGTGATTTTGTAGGCTCA 59.928 43.478 0.00 0.00 0.00 4.26
4962 6512 3.674997 TCTGGTGTGATTTTGTAGGCTC 58.325 45.455 0.00 0.00 0.00 4.70
4963 6513 3.788227 TCTGGTGTGATTTTGTAGGCT 57.212 42.857 0.00 0.00 0.00 4.58
4964 6514 4.846779 TTTCTGGTGTGATTTTGTAGGC 57.153 40.909 0.00 0.00 0.00 3.93
4965 6515 5.221224 TGCTTTTCTGGTGTGATTTTGTAGG 60.221 40.000 0.00 0.00 0.00 3.18
4966 6516 5.830912 TGCTTTTCTGGTGTGATTTTGTAG 58.169 37.500 0.00 0.00 0.00 2.74
5009 6570 8.715998 GGCTACTTAAGGAGTAAAGTAAAACAC 58.284 37.037 16.25 0.00 40.25 3.32
5010 6571 8.431222 TGGCTACTTAAGGAGTAAAGTAAAACA 58.569 33.333 16.25 0.00 40.25 2.83
5011 6572 8.715998 GTGGCTACTTAAGGAGTAAAGTAAAAC 58.284 37.037 16.25 0.00 40.25 2.43
5012 6573 8.431222 TGTGGCTACTTAAGGAGTAAAGTAAAA 58.569 33.333 16.25 0.00 40.25 1.52
5014 6575 7.015487 TGTGTGGCTACTTAAGGAGTAAAGTAA 59.985 37.037 16.25 0.00 40.25 2.24
5015 6576 6.494491 TGTGTGGCTACTTAAGGAGTAAAGTA 59.506 38.462 16.25 0.00 40.25 2.24
5016 6577 5.306160 TGTGTGGCTACTTAAGGAGTAAAGT 59.694 40.000 16.25 0.00 40.25 2.66
5017 6578 5.790593 TGTGTGGCTACTTAAGGAGTAAAG 58.209 41.667 16.25 0.63 40.25 1.85
5018 6579 5.279809 CCTGTGTGGCTACTTAAGGAGTAAA 60.280 44.000 16.25 0.00 40.25 2.01
5019 6580 4.222145 CCTGTGTGGCTACTTAAGGAGTAA 59.778 45.833 16.25 2.13 40.25 2.24
5020 6581 3.767673 CCTGTGTGGCTACTTAAGGAGTA 59.232 47.826 16.25 3.31 39.86 2.59
5021 6582 2.567615 CCTGTGTGGCTACTTAAGGAGT 59.432 50.000 16.25 0.00 42.55 3.85
5022 6583 2.832129 TCCTGTGTGGCTACTTAAGGAG 59.168 50.000 10.66 10.66 35.26 3.69
5023 6584 2.897350 TCCTGTGTGGCTACTTAAGGA 58.103 47.619 7.53 12.71 35.26 3.36
5024 6585 3.695830 TTCCTGTGTGGCTACTTAAGG 57.304 47.619 7.53 5.96 35.26 2.69
5025 6586 9.862371 CTATATATTCCTGTGTGGCTACTTAAG 57.138 37.037 0.64 0.00 35.26 1.85
5028 6593 6.213600 CCCTATATATTCCTGTGTGGCTACTT 59.786 42.308 0.64 0.00 35.26 2.24
5049 6614 5.981315 CGCGTACTATTTTCTCATTTCCCTA 59.019 40.000 0.00 0.00 0.00 3.53
5050 6615 4.809426 CGCGTACTATTTTCTCATTTCCCT 59.191 41.667 0.00 0.00 0.00 4.20
5062 6627 2.299521 AGGAGCTCTCGCGTACTATTT 58.700 47.619 14.64 0.00 42.32 1.40
5163 6747 1.260297 CGACACGCACACTGAATTCAA 59.740 47.619 9.88 0.00 0.00 2.69
5172 6756 0.453615 CTCTCTCTCGACACGCACAC 60.454 60.000 0.00 0.00 0.00 3.82
5173 6757 0.602905 TCTCTCTCTCGACACGCACA 60.603 55.000 0.00 0.00 0.00 4.57
5177 6774 1.597195 CTCCATCTCTCTCTCGACACG 59.403 57.143 0.00 0.00 0.00 4.49
5241 6867 0.950555 TGAACACGGATGCACAGAGC 60.951 55.000 0.00 0.00 45.96 4.09
5242 6868 1.073964 CTGAACACGGATGCACAGAG 58.926 55.000 0.00 0.00 35.57 3.35
5243 6869 0.392706 ACTGAACACGGATGCACAGA 59.607 50.000 0.00 0.00 36.45 3.41
5244 6870 1.069703 CAACTGAACACGGATGCACAG 60.070 52.381 0.00 0.00 37.90 3.66
5245 6871 0.943673 CAACTGAACACGGATGCACA 59.056 50.000 0.00 0.00 0.00 4.57
5248 6874 1.601903 TGAACAACTGAACACGGATGC 59.398 47.619 0.00 0.00 0.00 3.91
5260 6886 9.080097 GGAGTACTCCTACATATATGAACAACT 57.920 37.037 31.12 11.65 46.16 3.16
5280 6906 8.831490 TGCATCCTTTAGCACATACGGAGTAC 62.831 46.154 0.00 0.00 40.27 2.73
5281 6907 6.904876 TGCATCCTTTAGCACATACGGAGTA 61.905 44.000 0.00 0.00 41.22 2.59
5282 6908 6.194048 TGCATCCTTTAGCACATACGGAGT 62.194 45.833 0.00 0.00 39.52 3.85
5283 6909 2.802816 GCATCCTTTAGCACATACGGAG 59.197 50.000 0.00 0.00 0.00 4.63
5284 6910 2.169561 TGCATCCTTTAGCACATACGGA 59.830 45.455 0.00 0.00 35.51 4.69
5285 6911 2.560504 TGCATCCTTTAGCACATACGG 58.439 47.619 0.00 0.00 35.51 4.02
5289 6915 6.153340 ACATTTACTTGCATCCTTTAGCACAT 59.847 34.615 0.00 0.00 41.05 3.21
5301 6927 6.029346 AGCTGCTAAAACATTTACTTGCAT 57.971 33.333 0.00 0.00 0.00 3.96
5303 6929 6.842163 TCTAGCTGCTAAAACATTTACTTGC 58.158 36.000 11.02 0.00 0.00 4.01
5304 6930 9.334693 CTTTCTAGCTGCTAAAACATTTACTTG 57.665 33.333 11.02 0.00 0.00 3.16
5305 6931 8.023706 GCTTTCTAGCTGCTAAAACATTTACTT 58.976 33.333 11.02 0.00 44.27 2.24
5306 6932 7.530863 GCTTTCTAGCTGCTAAAACATTTACT 58.469 34.615 11.02 0.00 44.27 2.24
5323 6949 5.276114 CGTTCGTTCTGATGATGCTTTCTAG 60.276 44.000 0.00 0.00 0.00 2.43
5325 6951 3.369147 CGTTCGTTCTGATGATGCTTTCT 59.631 43.478 0.00 0.00 0.00 2.52
5340 6966 1.325338 CTGTTCGTTGGTTCGTTCGTT 59.675 47.619 0.00 0.00 0.00 3.85
5341 6967 0.925466 CTGTTCGTTGGTTCGTTCGT 59.075 50.000 0.00 0.00 0.00 3.85
5342 6968 1.202203 TCTGTTCGTTGGTTCGTTCG 58.798 50.000 0.00 0.00 0.00 3.95
5343 6969 3.872560 ATTCTGTTCGTTGGTTCGTTC 57.127 42.857 0.00 0.00 0.00 3.95
5344 6970 4.025480 GTGTATTCTGTTCGTTGGTTCGTT 60.025 41.667 0.00 0.00 0.00 3.85
5345 6971 3.492011 GTGTATTCTGTTCGTTGGTTCGT 59.508 43.478 0.00 0.00 0.00 3.85
5346 6972 3.491639 TGTGTATTCTGTTCGTTGGTTCG 59.508 43.478 0.00 0.00 0.00 3.95
5347 6973 4.607557 CGTGTGTATTCTGTTCGTTGGTTC 60.608 45.833 0.00 0.00 0.00 3.62
5348 6974 3.246699 CGTGTGTATTCTGTTCGTTGGTT 59.753 43.478 0.00 0.00 0.00 3.67
5349 6975 2.798283 CGTGTGTATTCTGTTCGTTGGT 59.202 45.455 0.00 0.00 0.00 3.67
5350 6976 3.054166 TCGTGTGTATTCTGTTCGTTGG 58.946 45.455 0.00 0.00 0.00 3.77
5351 6977 3.420035 CGTCGTGTGTATTCTGTTCGTTG 60.420 47.826 0.00 0.00 0.00 4.10
5352 6978 2.722629 CGTCGTGTGTATTCTGTTCGTT 59.277 45.455 0.00 0.00 0.00 3.85
5353 6979 2.031769 TCGTCGTGTGTATTCTGTTCGT 60.032 45.455 0.00 0.00 0.00 3.85
5354 6980 2.577450 TCGTCGTGTGTATTCTGTTCG 58.423 47.619 0.00 0.00 0.00 3.95
5355 6981 4.088213 GTCTTCGTCGTGTGTATTCTGTTC 59.912 45.833 0.00 0.00 0.00 3.18
5356 6982 3.979495 GTCTTCGTCGTGTGTATTCTGTT 59.021 43.478 0.00 0.00 0.00 3.16
5357 6983 3.004002 TGTCTTCGTCGTGTGTATTCTGT 59.996 43.478 0.00 0.00 0.00 3.41
5358 6984 3.561503 TGTCTTCGTCGTGTGTATTCTG 58.438 45.455 0.00 0.00 0.00 3.02
5359 6985 3.909776 TGTCTTCGTCGTGTGTATTCT 57.090 42.857 0.00 0.00 0.00 2.40
5360 6986 5.398711 GGATATGTCTTCGTCGTGTGTATTC 59.601 44.000 0.00 0.00 0.00 1.75
5361 6987 5.163591 TGGATATGTCTTCGTCGTGTGTATT 60.164 40.000 0.00 0.00 0.00 1.89
5362 6988 4.337274 TGGATATGTCTTCGTCGTGTGTAT 59.663 41.667 0.00 0.00 0.00 2.29
5363 6989 3.690628 TGGATATGTCTTCGTCGTGTGTA 59.309 43.478 0.00 0.00 0.00 2.90
5364 6990 2.490509 TGGATATGTCTTCGTCGTGTGT 59.509 45.455 0.00 0.00 0.00 3.72
5365 6991 3.108881 CTGGATATGTCTTCGTCGTGTG 58.891 50.000 0.00 0.00 0.00 3.82
5366 6992 2.479730 GCTGGATATGTCTTCGTCGTGT 60.480 50.000 0.00 0.00 0.00 4.49
5367 6993 2.120232 GCTGGATATGTCTTCGTCGTG 58.880 52.381 0.00 0.00 0.00 4.35
5368 6994 1.749063 TGCTGGATATGTCTTCGTCGT 59.251 47.619 0.00 0.00 0.00 4.34
5369 6995 2.223595 ACTGCTGGATATGTCTTCGTCG 60.224 50.000 0.00 0.00 0.00 5.12
5370 6996 3.119291 CACTGCTGGATATGTCTTCGTC 58.881 50.000 0.00 0.00 0.00 4.20
5371 6997 2.739932 GCACTGCTGGATATGTCTTCGT 60.740 50.000 0.00 0.00 0.00 3.85
5372 6998 1.863454 GCACTGCTGGATATGTCTTCG 59.137 52.381 0.00 0.00 0.00 3.79
5373 6999 3.191078 AGCACTGCTGGATATGTCTTC 57.809 47.619 1.67 0.00 37.57 2.87
5374 7000 3.199508 AGAAGCACTGCTGGATATGTCTT 59.800 43.478 3.73 0.00 39.62 3.01
5375 7001 2.770802 AGAAGCACTGCTGGATATGTCT 59.229 45.455 3.73 0.00 39.62 3.41
5376 7002 3.191078 AGAAGCACTGCTGGATATGTC 57.809 47.619 3.73 0.00 39.62 3.06
5377 7003 3.641434 AAGAAGCACTGCTGGATATGT 57.359 42.857 3.73 0.00 39.62 2.29
5378 7004 4.197750 AGAAAGAAGCACTGCTGGATATG 58.802 43.478 3.73 0.00 39.62 1.78
5379 7005 4.450053 GAGAAAGAAGCACTGCTGGATAT 58.550 43.478 3.73 0.00 39.62 1.63
5380 7006 3.677148 CGAGAAAGAAGCACTGCTGGATA 60.677 47.826 3.73 0.00 39.62 2.59
5381 7007 2.709213 GAGAAAGAAGCACTGCTGGAT 58.291 47.619 3.73 0.00 39.62 3.41
5382 7008 1.606480 CGAGAAAGAAGCACTGCTGGA 60.606 52.381 3.73 0.00 39.62 3.86
5383 7009 0.795085 CGAGAAAGAAGCACTGCTGG 59.205 55.000 3.73 0.00 39.62 4.85
5384 7010 1.725706 CTCGAGAAAGAAGCACTGCTG 59.274 52.381 6.58 0.00 39.62 4.41
5385 7011 1.342819 ACTCGAGAAAGAAGCACTGCT 59.657 47.619 21.68 0.00 42.56 4.24
5386 7012 1.458827 CACTCGAGAAAGAAGCACTGC 59.541 52.381 21.68 0.00 0.00 4.40
5387 7013 2.064762 CCACTCGAGAAAGAAGCACTG 58.935 52.381 21.68 2.16 0.00 3.66
5388 7014 1.689273 ACCACTCGAGAAAGAAGCACT 59.311 47.619 21.68 0.00 0.00 4.40
5389 7015 1.795286 CACCACTCGAGAAAGAAGCAC 59.205 52.381 21.68 0.00 0.00 4.40
5402 7028 0.871057 GCAACAGAGAAGCACCACTC 59.129 55.000 0.00 0.00 0.00 3.51
5404 7030 0.536006 AGGCAACAGAGAAGCACCAC 60.536 55.000 0.00 0.00 41.41 4.16
5435 7061 2.434884 CTTCTGCCCGCATCGTGT 60.435 61.111 0.00 0.00 0.00 4.49
5436 7062 1.091771 ATTCTTCTGCCCGCATCGTG 61.092 55.000 0.00 0.00 0.00 4.35
5437 7063 1.091771 CATTCTTCTGCCCGCATCGT 61.092 55.000 0.00 0.00 0.00 3.73
5438 7064 1.091771 ACATTCTTCTGCCCGCATCG 61.092 55.000 0.00 0.00 0.00 3.84
5439 7065 0.379669 CACATTCTTCTGCCCGCATC 59.620 55.000 0.00 0.00 0.00 3.91
5440 7066 1.033746 CCACATTCTTCTGCCCGCAT 61.034 55.000 0.00 0.00 0.00 4.73
5441 7067 1.675310 CCACATTCTTCTGCCCGCA 60.675 57.895 0.00 0.00 0.00 5.69
5442 7068 1.675641 ACCACATTCTTCTGCCCGC 60.676 57.895 0.00 0.00 0.00 6.13
5443 7069 1.926511 GCACCACATTCTTCTGCCCG 61.927 60.000 0.00 0.00 0.00 6.13
5444 7070 0.610232 AGCACCACATTCTTCTGCCC 60.610 55.000 0.00 0.00 0.00 5.36
5445 7071 0.524862 CAGCACCACATTCTTCTGCC 59.475 55.000 0.00 0.00 0.00 4.85
5446 7072 0.109412 GCAGCACCACATTCTTCTGC 60.109 55.000 0.00 0.00 39.82 4.26
5447 7073 0.167470 CGCAGCACCACATTCTTCTG 59.833 55.000 0.00 0.00 0.00 3.02
5448 7074 2.548178 CGCAGCACCACATTCTTCT 58.452 52.632 0.00 0.00 0.00 2.85
5491 7117 2.161486 GTGACGGCTAGCAGCGAAG 61.161 63.158 18.24 2.71 43.62 3.79
5492 7118 2.126071 GTGACGGCTAGCAGCGAA 60.126 61.111 18.24 3.50 43.62 4.70
5493 7119 4.129737 GGTGACGGCTAGCAGCGA 62.130 66.667 18.24 0.00 43.62 4.93
5494 7120 4.135153 AGGTGACGGCTAGCAGCG 62.135 66.667 18.24 14.33 43.62 5.18
5495 7121 2.202810 GAGGTGACGGCTAGCAGC 60.203 66.667 18.24 9.50 41.46 5.25
5496 7122 0.459237 CTTGAGGTGACGGCTAGCAG 60.459 60.000 18.24 15.90 0.00 4.24
5497 7123 1.185618 ACTTGAGGTGACGGCTAGCA 61.186 55.000 18.24 0.00 0.00 3.49
5498 7124 1.592223 ACTTGAGGTGACGGCTAGC 59.408 57.895 6.04 6.04 0.00 3.42
5508 7134 2.345244 CTGCTCGGCACTTGAGGT 59.655 61.111 0.00 0.00 33.79 3.85
5509 7135 3.123620 GCTGCTCGGCACTTGAGG 61.124 66.667 0.00 0.00 33.79 3.86
5510 7136 2.047465 AGCTGCTCGGCACTTGAG 60.047 61.111 0.00 0.00 33.79 3.02
5511 7137 2.047844 GAGCTGCTCGGCACTTGA 60.048 61.111 14.68 0.00 33.79 3.02
5520 7146 3.177920 CGTGTGCTCGAGCTGCTC 61.178 66.667 35.27 25.19 42.66 4.26
5526 7152 1.817217 TTTTCACGCGTGTGCTCGAG 61.817 55.000 35.74 8.45 46.01 4.04
5527 7153 1.422179 TTTTTCACGCGTGTGCTCGA 61.422 50.000 35.74 15.49 46.01 4.04
5528 7154 1.011684 TTTTTCACGCGTGTGCTCG 60.012 52.632 35.74 12.50 46.01 5.03
5529 7155 0.027586 AGTTTTTCACGCGTGTGCTC 59.972 50.000 35.74 22.64 46.01 4.26
5530 7156 1.004292 GTAGTTTTTCACGCGTGTGCT 60.004 47.619 35.74 26.26 46.01 4.40
5531 7157 1.267632 TGTAGTTTTTCACGCGTGTGC 60.268 47.619 35.74 20.59 46.01 4.57
5533 7159 3.743567 TTTGTAGTTTTTCACGCGTGT 57.256 38.095 35.74 19.86 0.00 4.49
5534 7160 4.375698 CAGATTTGTAGTTTTTCACGCGTG 59.624 41.667 32.76 32.76 0.00 5.34
5535 7161 4.523813 CAGATTTGTAGTTTTTCACGCGT 58.476 39.130 5.58 5.58 0.00 6.01
5536 7162 3.906008 CCAGATTTGTAGTTTTTCACGCG 59.094 43.478 3.53 3.53 0.00 6.01
5537 7163 3.668656 GCCAGATTTGTAGTTTTTCACGC 59.331 43.478 0.00 0.00 0.00 5.34
5538 7164 4.226761 GGCCAGATTTGTAGTTTTTCACG 58.773 43.478 0.00 0.00 0.00 4.35
5539 7165 4.280929 AGGGCCAGATTTGTAGTTTTTCAC 59.719 41.667 6.18 0.00 0.00 3.18
5540 7166 4.479158 AGGGCCAGATTTGTAGTTTTTCA 58.521 39.130 6.18 0.00 0.00 2.69
5541 7167 5.468540 AAGGGCCAGATTTGTAGTTTTTC 57.531 39.130 6.18 0.00 0.00 2.29
5542 7168 5.365314 TCAAAGGGCCAGATTTGTAGTTTTT 59.635 36.000 20.36 0.00 37.60 1.94
5543 7169 4.898861 TCAAAGGGCCAGATTTGTAGTTTT 59.101 37.500 20.36 0.00 37.60 2.43
5544 7170 4.280929 GTCAAAGGGCCAGATTTGTAGTTT 59.719 41.667 20.36 0.00 37.60 2.66
5545 7171 3.826729 GTCAAAGGGCCAGATTTGTAGTT 59.173 43.478 20.36 0.00 37.60 2.24
5546 7172 3.421844 GTCAAAGGGCCAGATTTGTAGT 58.578 45.455 20.36 0.00 37.60 2.73
5547 7173 2.755103 GGTCAAAGGGCCAGATTTGTAG 59.245 50.000 20.36 3.22 37.60 2.74
5548 7174 2.109128 TGGTCAAAGGGCCAGATTTGTA 59.891 45.455 20.36 9.69 37.60 2.41
5549 7175 1.133199 TGGTCAAAGGGCCAGATTTGT 60.133 47.619 20.36 0.00 37.60 2.83
5550 7176 1.631405 TGGTCAAAGGGCCAGATTTG 58.369 50.000 16.97 16.97 37.67 2.32
5551 7177 2.368548 GTTTGGTCAAAGGGCCAGATTT 59.631 45.455 6.18 0.00 36.00 2.17
5552 7178 1.970640 GTTTGGTCAAAGGGCCAGATT 59.029 47.619 6.18 0.00 36.00 2.40
5553 7179 1.147817 AGTTTGGTCAAAGGGCCAGAT 59.852 47.619 6.18 0.00 36.00 2.90
5554 7180 0.555769 AGTTTGGTCAAAGGGCCAGA 59.444 50.000 6.18 0.00 36.00 3.86
5555 7181 1.341209 GAAGTTTGGTCAAAGGGCCAG 59.659 52.381 6.18 0.00 36.00 4.85
5556 7182 1.342474 TGAAGTTTGGTCAAAGGGCCA 60.342 47.619 6.18 0.00 0.00 5.36
5557 7183 1.341209 CTGAAGTTTGGTCAAAGGGCC 59.659 52.381 0.00 0.00 0.00 5.80
5558 7184 1.269778 GCTGAAGTTTGGTCAAAGGGC 60.270 52.381 0.00 0.00 0.00 5.19
5559 7185 2.031120 TGCTGAAGTTTGGTCAAAGGG 58.969 47.619 0.00 0.00 0.00 3.95
5560 7186 3.318839 TCATGCTGAAGTTTGGTCAAAGG 59.681 43.478 0.00 0.00 0.00 3.11
5561 7187 4.572985 TCATGCTGAAGTTTGGTCAAAG 57.427 40.909 0.00 0.00 0.00 2.77
5562 7188 4.998671 TTCATGCTGAAGTTTGGTCAAA 57.001 36.364 0.00 0.00 31.83 2.69
5563 7189 4.583907 TCATTCATGCTGAAGTTTGGTCAA 59.416 37.500 5.15 0.00 40.05 3.18
5564 7190 4.022935 GTCATTCATGCTGAAGTTTGGTCA 60.023 41.667 5.15 0.00 40.05 4.02
5565 7191 4.479619 GTCATTCATGCTGAAGTTTGGTC 58.520 43.478 5.15 0.00 40.05 4.02
5566 7192 3.256631 GGTCATTCATGCTGAAGTTTGGT 59.743 43.478 5.15 0.00 40.05 3.67
5567 7193 3.367703 GGGTCATTCATGCTGAAGTTTGG 60.368 47.826 5.15 0.00 40.05 3.28
5568 7194 3.508793 AGGGTCATTCATGCTGAAGTTTG 59.491 43.478 5.15 0.39 40.05 2.93
5569 7195 3.760684 GAGGGTCATTCATGCTGAAGTTT 59.239 43.478 5.15 0.00 40.05 2.66
5570 7196 3.350833 GAGGGTCATTCATGCTGAAGTT 58.649 45.455 5.15 0.00 40.05 2.66
5571 7197 2.356535 GGAGGGTCATTCATGCTGAAGT 60.357 50.000 5.15 0.00 40.05 3.01
5572 7198 2.092538 AGGAGGGTCATTCATGCTGAAG 60.093 50.000 5.15 0.00 40.05 3.02
5573 7199 1.918262 AGGAGGGTCATTCATGCTGAA 59.082 47.619 0.06 1.85 41.09 3.02
5574 7200 1.588239 AGGAGGGTCATTCATGCTGA 58.412 50.000 0.00 0.00 0.00 4.26
5575 7201 2.431954 AAGGAGGGTCATTCATGCTG 57.568 50.000 0.00 0.00 0.00 4.41
5576 7202 4.591321 TTAAAGGAGGGTCATTCATGCT 57.409 40.909 0.00 0.00 0.00 3.79
5577 7203 5.659440 TTTTAAAGGAGGGTCATTCATGC 57.341 39.130 0.00 0.00 0.00 4.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.