Multiple sequence alignment - TraesCS7B01G360200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G360200 chr7B 100.000 3774 0 0 1 3774 622622414 622626187 0.000000e+00 6970.0
1 TraesCS7B01G360200 chr7D 93.181 2317 106 23 1473 3774 568011130 568013409 0.000000e+00 3356.0
2 TraesCS7B01G360200 chr7D 94.333 547 31 0 930 1476 568010501 568011047 0.000000e+00 839.0
3 TraesCS7B01G360200 chr7A 91.432 1809 116 17 1980 3774 655370027 655371810 0.000000e+00 2446.0
4 TraesCS7B01G360200 chr7A 91.332 946 52 11 930 1856 655368766 655369700 0.000000e+00 1266.0
5 TraesCS7B01G360200 chr7A 82.373 590 68 14 1 589 655368298 655368852 7.330000e-132 481.0
6 TraesCS7B01G360200 chr5D 85.000 120 14 2 2109 2228 485390147 485390032 6.620000e-23 119.0
7 TraesCS7B01G360200 chr2B 100.000 29 0 0 3617 3645 77917092 77917120 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G360200 chr7B 622622414 622626187 3773 False 6970.000000 6970 100.000 1 3774 1 chr7B.!!$F1 3773
1 TraesCS7B01G360200 chr7D 568010501 568013409 2908 False 2097.500000 3356 93.757 930 3774 2 chr7D.!!$F1 2844
2 TraesCS7B01G360200 chr7A 655368298 655371810 3512 False 1397.666667 2446 88.379 1 3774 3 chr7A.!!$F1 3773

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
378 379 0.037326 TTCAACTACAGCTCCGCCTG 60.037 55.0 0.00 0.0 38.78 4.85 F
639 641 0.105593 GCTGGCGAGGATGAAGATGA 59.894 55.0 0.00 0.0 0.00 2.92 F
1296 1301 0.105709 CTCCCCTCCTCTCCTTCCTC 60.106 65.0 0.00 0.0 0.00 3.71 F
2587 2911 0.469705 TTGTGTCCCCTTGCTGCAAT 60.470 50.0 16.38 0.0 0.00 3.56 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2318 2641 0.105964 CGTGGAACTGAACCCTGTCA 59.894 55.000 0.0 0.0 31.75 3.58 R
2559 2883 1.456705 GGGGACACAACAGGGCAAA 60.457 57.895 0.0 0.0 0.00 3.68 R
2677 3001 0.251474 TCCTCGAACCCTCTTTCGGA 60.251 55.000 5.5 0.0 46.77 4.55 R
3607 3953 0.033601 AACAAGAGCCACAACCACCA 60.034 50.000 0.0 0.0 0.00 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
94 95 1.751924 CGTCTTGGAACCCTAGAGGAG 59.248 57.143 10.19 0.00 41.30 3.69
96 97 3.028130 GTCTTGGAACCCTAGAGGAGAG 58.972 54.545 0.00 0.00 36.20 3.20
98 99 1.695065 TGGAACCCTAGAGGAGAGGA 58.305 55.000 0.00 0.00 39.89 3.71
137 138 1.619654 TGGTGGAGCAATTCTTGGTG 58.380 50.000 0.00 0.00 42.23 4.17
141 142 2.488153 GTGGAGCAATTCTTGGTGTACC 59.512 50.000 0.00 0.00 42.23 3.34
186 187 5.412904 GGTGGAGTTCAGTTGGATAAAAGAG 59.587 44.000 0.00 0.00 0.00 2.85
187 188 6.231211 GTGGAGTTCAGTTGGATAAAAGAGA 58.769 40.000 0.00 0.00 0.00 3.10
190 191 7.038017 TGGAGTTCAGTTGGATAAAAGAGAGAT 60.038 37.037 0.00 0.00 0.00 2.75
191 192 7.279758 GGAGTTCAGTTGGATAAAAGAGAGATG 59.720 40.741 0.00 0.00 0.00 2.90
192 193 7.108847 AGTTCAGTTGGATAAAAGAGAGATGG 58.891 38.462 0.00 0.00 0.00 3.51
199 200 9.014297 GTTGGATAAAAGAGAGATGGAAAGAAA 57.986 33.333 0.00 0.00 0.00 2.52
203 204 8.940397 ATAAAAGAGAGATGGAAAGAAACCAA 57.060 30.769 0.00 0.00 40.93 3.67
205 206 4.319177 AGAGAGATGGAAAGAAACCAACG 58.681 43.478 0.00 0.00 40.93 4.10
209 210 1.394618 TGGAAAGAAACCAACGTGGG 58.605 50.000 7.67 7.67 43.37 4.61
219 220 1.654220 CAACGTGGGTGAGGCAAAG 59.346 57.895 0.00 0.00 0.00 2.77
222 223 0.106918 ACGTGGGTGAGGCAAAGAAA 60.107 50.000 0.00 0.00 0.00 2.52
224 225 1.269051 CGTGGGTGAGGCAAAGAAAAC 60.269 52.381 0.00 0.00 0.00 2.43
225 226 2.031870 GTGGGTGAGGCAAAGAAAACT 58.968 47.619 0.00 0.00 0.00 2.66
227 228 3.253432 GTGGGTGAGGCAAAGAAAACTAG 59.747 47.826 0.00 0.00 0.00 2.57
228 229 2.820197 GGGTGAGGCAAAGAAAACTAGG 59.180 50.000 0.00 0.00 0.00 3.02
236 237 5.759763 AGGCAAAGAAAACTAGGCAAAAATG 59.240 36.000 0.00 0.00 0.00 2.32
238 239 6.259829 GGCAAAGAAAACTAGGCAAAAATGAA 59.740 34.615 0.00 0.00 0.00 2.57
242 243 5.300792 AGAAAACTAGGCAAAAATGAACCGA 59.699 36.000 0.00 0.00 0.00 4.69
243 244 5.722021 AAACTAGGCAAAAATGAACCGAT 57.278 34.783 0.00 0.00 0.00 4.18
263 264 2.180276 TGAGGAGAAGCTACCAACTCC 58.820 52.381 0.00 0.00 46.28 3.85
271 272 3.983044 AGCTACCAACTCCCACTTTAG 57.017 47.619 0.00 0.00 0.00 1.85
288 289 7.509659 CCCACTTTAGGAGTAGATATTAGGTGT 59.490 40.741 0.00 0.00 36.65 4.16
296 297 7.039644 AGGAGTAGATATTAGGTGTTTGATCGG 60.040 40.741 0.00 0.00 0.00 4.18
297 298 6.456501 AGTAGATATTAGGTGTTTGATCGGC 58.543 40.000 0.00 0.00 0.00 5.54
312 313 2.895372 GGCAATCCACCGGCTACG 60.895 66.667 0.00 0.00 40.55 3.51
314 315 1.883084 GCAATCCACCGGCTACGAG 60.883 63.158 0.00 0.00 44.60 4.18
333 334 2.293677 GAGAAATACGAGGATCTGCGGA 59.706 50.000 0.00 0.00 0.00 5.54
351 352 2.682836 GGAGCATCTATTTCTCCGCTC 58.317 52.381 0.00 0.00 43.98 5.03
357 358 4.810790 CATCTATTTCTCCGCTCCGTTAT 58.189 43.478 0.00 0.00 0.00 1.89
359 360 5.272283 TCTATTTCTCCGCTCCGTTATTT 57.728 39.130 0.00 0.00 0.00 1.40
366 367 4.082081 TCTCCGCTCCGTTATTTTCAACTA 60.082 41.667 0.00 0.00 0.00 2.24
367 368 3.928375 TCCGCTCCGTTATTTTCAACTAC 59.072 43.478 0.00 0.00 0.00 2.73
375 376 4.648970 GTTATTTTCAACTACAGCTCCGC 58.351 43.478 0.00 0.00 0.00 5.54
376 377 1.519408 TTTTCAACTACAGCTCCGCC 58.481 50.000 0.00 0.00 0.00 6.13
378 379 0.037326 TTCAACTACAGCTCCGCCTG 60.037 55.000 0.00 0.00 38.78 4.85
380 381 2.286523 AACTACAGCTCCGCCTGCT 61.287 57.895 0.00 0.00 42.06 4.24
395 397 1.228583 TGCTCCAGGAGTGAGTCGT 60.229 57.895 18.37 0.00 32.31 4.34
401 403 2.179517 GGAGTGAGTCGTGGAGCG 59.820 66.667 0.00 0.00 43.01 5.03
421 423 1.841556 AGGGACTCCGAACAAGCCA 60.842 57.895 0.00 0.00 38.33 4.75
429 431 2.693591 CTCCGAACAAGCCATAGGAGTA 59.306 50.000 1.45 0.00 40.10 2.59
430 432 2.693591 TCCGAACAAGCCATAGGAGTAG 59.306 50.000 0.00 0.00 0.00 2.57
431 433 2.693591 CCGAACAAGCCATAGGAGTAGA 59.306 50.000 0.00 0.00 0.00 2.59
432 434 3.243569 CCGAACAAGCCATAGGAGTAGAG 60.244 52.174 0.00 0.00 0.00 2.43
433 435 3.632604 CGAACAAGCCATAGGAGTAGAGA 59.367 47.826 0.00 0.00 0.00 3.10
434 436 4.279671 CGAACAAGCCATAGGAGTAGAGAT 59.720 45.833 0.00 0.00 0.00 2.75
435 437 5.221342 CGAACAAGCCATAGGAGTAGAGATT 60.221 44.000 0.00 0.00 0.00 2.40
436 438 6.567602 AACAAGCCATAGGAGTAGAGATTT 57.432 37.500 0.00 0.00 0.00 2.17
437 439 7.470147 CGAACAAGCCATAGGAGTAGAGATTTA 60.470 40.741 0.00 0.00 0.00 1.40
438 440 7.296628 ACAAGCCATAGGAGTAGAGATTTAG 57.703 40.000 0.00 0.00 0.00 1.85
439 441 6.268847 ACAAGCCATAGGAGTAGAGATTTAGG 59.731 42.308 0.00 0.00 0.00 2.69
451 453 9.787435 GAGTAGAGATTTAGGAGTAGAGATCAA 57.213 37.037 0.00 0.00 0.00 2.57
455 457 8.058847 AGAGATTTAGGAGTAGAGATCAACTGT 58.941 37.037 0.00 0.00 0.00 3.55
473 475 6.553852 TCAACTGTAGTTAAGAGGTTCCTTCT 59.446 38.462 0.00 0.00 36.32 2.85
481 483 7.443477 AGTTAAGAGGTTCCTTCTGTAAGTTC 58.557 38.462 0.00 0.00 33.76 3.01
482 484 4.522722 AGAGGTTCCTTCTGTAAGTTCG 57.477 45.455 0.00 0.00 33.76 3.95
483 485 4.150359 AGAGGTTCCTTCTGTAAGTTCGA 58.850 43.478 0.00 0.00 33.76 3.71
488 490 6.260271 AGGTTCCTTCTGTAAGTTCGAAAAAG 59.740 38.462 0.00 0.00 33.76 2.27
491 493 7.852971 TCCTTCTGTAAGTTCGAAAAAGAAA 57.147 32.000 0.00 0.00 33.76 2.52
492 494 7.916552 TCCTTCTGTAAGTTCGAAAAAGAAAG 58.083 34.615 0.00 0.00 33.76 2.62
493 495 7.767198 TCCTTCTGTAAGTTCGAAAAAGAAAGA 59.233 33.333 0.00 0.00 33.76 2.52
494 496 8.395633 CCTTCTGTAAGTTCGAAAAAGAAAGAA 58.604 33.333 0.00 5.01 33.76 2.52
495 497 9.427127 CTTCTGTAAGTTCGAAAAAGAAAGAAG 57.573 33.333 16.61 16.61 35.55 2.85
496 498 8.712285 TCTGTAAGTTCGAAAAAGAAAGAAGA 57.288 30.769 0.00 0.00 33.76 2.87
497 499 9.158233 TCTGTAAGTTCGAAAAAGAAAGAAGAA 57.842 29.630 0.00 0.00 33.76 2.52
498 500 9.769093 CTGTAAGTTCGAAAAAGAAAGAAGAAA 57.231 29.630 0.00 0.00 0.00 2.52
522 524 7.588497 AAAAAGAGCTTCCTTCTGTAAATGT 57.412 32.000 0.00 0.00 0.00 2.71
523 525 6.566197 AAAGAGCTTCCTTCTGTAAATGTG 57.434 37.500 0.00 0.00 0.00 3.21
524 526 4.006319 AGAGCTTCCTTCTGTAAATGTGC 58.994 43.478 0.00 0.00 0.00 4.57
525 527 3.084786 AGCTTCCTTCTGTAAATGTGCC 58.915 45.455 0.00 0.00 0.00 5.01
526 528 2.164422 GCTTCCTTCTGTAAATGTGCCC 59.836 50.000 0.00 0.00 0.00 5.36
527 529 3.690460 CTTCCTTCTGTAAATGTGCCCT 58.310 45.455 0.00 0.00 0.00 5.19
528 530 3.071874 TCCTTCTGTAAATGTGCCCTG 57.928 47.619 0.00 0.00 0.00 4.45
529 531 2.642311 TCCTTCTGTAAATGTGCCCTGA 59.358 45.455 0.00 0.00 0.00 3.86
530 532 3.012518 CCTTCTGTAAATGTGCCCTGAG 58.987 50.000 0.00 0.00 0.00 3.35
531 533 2.787473 TCTGTAAATGTGCCCTGAGG 57.213 50.000 0.00 0.00 0.00 3.86
542 544 3.483954 CCCTGAGGCCACACATTAG 57.516 57.895 5.01 0.00 0.00 1.73
543 545 0.749454 CCCTGAGGCCACACATTAGC 60.749 60.000 5.01 0.00 0.00 3.09
544 546 0.254178 CCTGAGGCCACACATTAGCT 59.746 55.000 5.01 0.00 0.00 3.32
545 547 1.661341 CTGAGGCCACACATTAGCTC 58.339 55.000 5.01 0.00 0.00 4.09
546 548 0.253044 TGAGGCCACACATTAGCTCC 59.747 55.000 5.01 0.00 0.00 4.70
547 549 0.253044 GAGGCCACACATTAGCTCCA 59.747 55.000 5.01 0.00 0.00 3.86
548 550 0.921896 AGGCCACACATTAGCTCCAT 59.078 50.000 5.01 0.00 0.00 3.41
549 551 1.133976 AGGCCACACATTAGCTCCATC 60.134 52.381 5.01 0.00 0.00 3.51
550 552 0.940126 GCCACACATTAGCTCCATCG 59.060 55.000 0.00 0.00 0.00 3.84
551 553 1.743772 GCCACACATTAGCTCCATCGT 60.744 52.381 0.00 0.00 0.00 3.73
552 554 2.483013 GCCACACATTAGCTCCATCGTA 60.483 50.000 0.00 0.00 0.00 3.43
553 555 3.803715 GCCACACATTAGCTCCATCGTAT 60.804 47.826 0.00 0.00 0.00 3.06
554 556 3.990469 CCACACATTAGCTCCATCGTATC 59.010 47.826 0.00 0.00 0.00 2.24
555 557 3.990469 CACACATTAGCTCCATCGTATCC 59.010 47.826 0.00 0.00 0.00 2.59
556 558 3.006967 ACACATTAGCTCCATCGTATCCC 59.993 47.826 0.00 0.00 0.00 3.85
557 559 3.259374 CACATTAGCTCCATCGTATCCCT 59.741 47.826 0.00 0.00 0.00 4.20
558 560 3.904339 ACATTAGCTCCATCGTATCCCTT 59.096 43.478 0.00 0.00 0.00 3.95
559 561 4.021016 ACATTAGCTCCATCGTATCCCTTC 60.021 45.833 0.00 0.00 0.00 3.46
560 562 2.088104 AGCTCCATCGTATCCCTTCA 57.912 50.000 0.00 0.00 0.00 3.02
561 563 1.689273 AGCTCCATCGTATCCCTTCAC 59.311 52.381 0.00 0.00 0.00 3.18
562 564 1.689273 GCTCCATCGTATCCCTTCACT 59.311 52.381 0.00 0.00 0.00 3.41
563 565 2.103263 GCTCCATCGTATCCCTTCACTT 59.897 50.000 0.00 0.00 0.00 3.16
564 566 3.800604 GCTCCATCGTATCCCTTCACTTC 60.801 52.174 0.00 0.00 0.00 3.01
565 567 3.371034 TCCATCGTATCCCTTCACTTCA 58.629 45.455 0.00 0.00 0.00 3.02
566 568 3.132289 TCCATCGTATCCCTTCACTTCAC 59.868 47.826 0.00 0.00 0.00 3.18
567 569 3.118775 CCATCGTATCCCTTCACTTCACA 60.119 47.826 0.00 0.00 0.00 3.58
568 570 4.443457 CCATCGTATCCCTTCACTTCACAT 60.443 45.833 0.00 0.00 0.00 3.21
569 571 4.386867 TCGTATCCCTTCACTTCACATC 57.613 45.455 0.00 0.00 0.00 3.06
570 572 3.132289 TCGTATCCCTTCACTTCACATCC 59.868 47.826 0.00 0.00 0.00 3.51
571 573 3.118775 CGTATCCCTTCACTTCACATCCA 60.119 47.826 0.00 0.00 0.00 3.41
572 574 4.622933 CGTATCCCTTCACTTCACATCCAA 60.623 45.833 0.00 0.00 0.00 3.53
573 575 4.598036 ATCCCTTCACTTCACATCCAAT 57.402 40.909 0.00 0.00 0.00 3.16
574 576 3.689347 TCCCTTCACTTCACATCCAATG 58.311 45.455 0.00 0.00 0.00 2.82
575 577 2.756760 CCCTTCACTTCACATCCAATGG 59.243 50.000 0.00 0.00 33.60 3.16
576 578 2.165030 CCTTCACTTCACATCCAATGGC 59.835 50.000 0.00 0.00 33.60 4.40
577 579 1.838112 TCACTTCACATCCAATGGCC 58.162 50.000 0.00 0.00 33.60 5.36
578 580 1.355381 TCACTTCACATCCAATGGCCT 59.645 47.619 3.32 0.00 33.60 5.19
579 581 2.575735 TCACTTCACATCCAATGGCCTA 59.424 45.455 3.32 0.00 33.60 3.93
580 582 3.202818 TCACTTCACATCCAATGGCCTAT 59.797 43.478 3.32 0.00 33.60 2.57
581 583 3.956199 CACTTCACATCCAATGGCCTATT 59.044 43.478 3.32 0.00 33.60 1.73
582 584 5.104151 TCACTTCACATCCAATGGCCTATTA 60.104 40.000 3.32 0.00 33.60 0.98
583 585 5.771666 CACTTCACATCCAATGGCCTATTAT 59.228 40.000 3.32 0.00 33.60 1.28
584 586 5.771666 ACTTCACATCCAATGGCCTATTATG 59.228 40.000 3.32 6.70 33.60 1.90
585 587 4.081406 TCACATCCAATGGCCTATTATGC 58.919 43.478 3.32 0.00 33.60 3.14
586 588 3.084039 ACATCCAATGGCCTATTATGCG 58.916 45.455 3.32 0.00 33.60 4.73
587 589 2.949177 TCCAATGGCCTATTATGCGT 57.051 45.000 3.32 0.00 0.00 5.24
588 590 2.778299 TCCAATGGCCTATTATGCGTC 58.222 47.619 3.32 0.00 0.00 5.19
589 591 2.105649 TCCAATGGCCTATTATGCGTCA 59.894 45.455 3.32 0.00 0.00 4.35
590 592 2.226437 CCAATGGCCTATTATGCGTCAC 59.774 50.000 3.32 0.00 0.00 3.67
591 593 2.185004 ATGGCCTATTATGCGTCACC 57.815 50.000 3.32 0.00 0.00 4.02
592 594 0.107831 TGGCCTATTATGCGTCACCC 59.892 55.000 3.32 0.00 0.00 4.61
593 595 0.107831 GGCCTATTATGCGTCACCCA 59.892 55.000 0.00 0.00 0.00 4.51
594 596 1.226746 GCCTATTATGCGTCACCCAC 58.773 55.000 0.00 0.00 0.00 4.61
602 604 4.619227 CGTCACCCACGGGCAAGT 62.619 66.667 0.69 0.00 45.46 3.16
603 605 2.668550 GTCACCCACGGGCAAGTC 60.669 66.667 0.69 0.00 39.32 3.01
604 606 3.948719 TCACCCACGGGCAAGTCC 61.949 66.667 0.69 0.00 39.32 3.85
632 634 2.513204 CCAGTGCTGGCGAGGATG 60.513 66.667 5.19 0.00 44.73 3.51
633 635 2.580815 CAGTGCTGGCGAGGATGA 59.419 61.111 0.00 0.00 0.00 2.92
634 636 1.078918 CAGTGCTGGCGAGGATGAA 60.079 57.895 0.00 0.00 0.00 2.57
635 637 1.088340 CAGTGCTGGCGAGGATGAAG 61.088 60.000 0.00 0.00 0.00 3.02
636 638 1.219124 GTGCTGGCGAGGATGAAGA 59.781 57.895 0.00 0.00 0.00 2.87
637 639 0.179062 GTGCTGGCGAGGATGAAGAT 60.179 55.000 0.00 0.00 0.00 2.40
638 640 0.179065 TGCTGGCGAGGATGAAGATG 60.179 55.000 0.00 0.00 0.00 2.90
639 641 0.105593 GCTGGCGAGGATGAAGATGA 59.894 55.000 0.00 0.00 0.00 2.92
640 642 1.873069 GCTGGCGAGGATGAAGATGAG 60.873 57.143 0.00 0.00 0.00 2.90
641 643 1.411977 CTGGCGAGGATGAAGATGAGT 59.588 52.381 0.00 0.00 0.00 3.41
642 644 2.625314 CTGGCGAGGATGAAGATGAGTA 59.375 50.000 0.00 0.00 0.00 2.59
643 645 2.625314 TGGCGAGGATGAAGATGAGTAG 59.375 50.000 0.00 0.00 0.00 2.57
644 646 2.887783 GGCGAGGATGAAGATGAGTAGA 59.112 50.000 0.00 0.00 0.00 2.59
645 647 3.319405 GGCGAGGATGAAGATGAGTAGAA 59.681 47.826 0.00 0.00 0.00 2.10
646 648 4.295051 GCGAGGATGAAGATGAGTAGAAC 58.705 47.826 0.00 0.00 0.00 3.01
647 649 4.037446 GCGAGGATGAAGATGAGTAGAACT 59.963 45.833 0.00 0.00 0.00 3.01
648 650 5.451242 GCGAGGATGAAGATGAGTAGAACTT 60.451 44.000 0.00 0.00 0.00 2.66
649 651 6.205784 CGAGGATGAAGATGAGTAGAACTTC 58.794 44.000 0.00 0.00 39.08 3.01
650 652 6.039270 CGAGGATGAAGATGAGTAGAACTTCT 59.961 42.308 0.00 0.00 39.28 2.85
651 653 7.227711 CGAGGATGAAGATGAGTAGAACTTCTA 59.772 40.741 0.00 0.00 39.28 2.10
652 654 9.077885 GAGGATGAAGATGAGTAGAACTTCTAT 57.922 37.037 1.77 0.00 39.28 1.98
653 655 8.859090 AGGATGAAGATGAGTAGAACTTCTATG 58.141 37.037 1.77 0.00 39.28 2.23
654 656 8.855110 GGATGAAGATGAGTAGAACTTCTATGA 58.145 37.037 1.77 0.00 39.28 2.15
666 668 9.388346 GTAGAACTTCTATGATACAATCAGTCG 57.612 37.037 1.77 0.00 43.53 4.18
667 669 8.001881 AGAACTTCTATGATACAATCAGTCGT 57.998 34.615 0.00 0.00 43.53 4.34
668 670 8.470805 AGAACTTCTATGATACAATCAGTCGTT 58.529 33.333 0.00 0.00 43.53 3.85
669 671 9.088512 GAACTTCTATGATACAATCAGTCGTTT 57.911 33.333 0.00 0.00 43.53 3.60
681 683 7.858583 ACAATCAGTCGTTTAAGTTTTAGACC 58.141 34.615 0.00 0.00 0.00 3.85
682 684 7.713942 ACAATCAGTCGTTTAAGTTTTAGACCT 59.286 33.333 0.00 0.00 0.00 3.85
683 685 9.199982 CAATCAGTCGTTTAAGTTTTAGACCTA 57.800 33.333 0.00 0.00 0.00 3.08
684 686 8.983307 ATCAGTCGTTTAAGTTTTAGACCTAG 57.017 34.615 0.00 0.00 0.00 3.02
685 687 7.945134 TCAGTCGTTTAAGTTTTAGACCTAGT 58.055 34.615 0.00 0.00 0.00 2.57
686 688 8.078596 TCAGTCGTTTAAGTTTTAGACCTAGTC 58.921 37.037 0.00 0.00 0.00 2.59
687 689 8.081025 CAGTCGTTTAAGTTTTAGACCTAGTCT 58.919 37.037 2.38 2.38 45.54 3.24
688 690 8.637099 AGTCGTTTAAGTTTTAGACCTAGTCTT 58.363 33.333 2.05 0.00 40.28 3.01
689 691 8.697960 GTCGTTTAAGTTTTAGACCTAGTCTTG 58.302 37.037 2.05 0.00 40.28 3.02
690 692 8.416329 TCGTTTAAGTTTTAGACCTAGTCTTGT 58.584 33.333 2.05 0.00 40.28 3.16
691 693 9.683069 CGTTTAAGTTTTAGACCTAGTCTTGTA 57.317 33.333 2.05 0.00 40.28 2.41
721 723 8.579850 AAATTTGAACTATCTATCAAGTGGCA 57.420 30.769 0.00 0.00 36.93 4.92
722 724 8.757982 AATTTGAACTATCTATCAAGTGGCAT 57.242 30.769 0.00 0.00 36.93 4.40
723 725 7.558161 TTTGAACTATCTATCAAGTGGCATG 57.442 36.000 0.00 0.00 36.93 4.06
724 726 5.059161 TGAACTATCTATCAAGTGGCATGC 58.941 41.667 9.90 9.90 0.00 4.06
725 727 4.970860 ACTATCTATCAAGTGGCATGCT 57.029 40.909 18.92 0.00 0.00 3.79
726 728 6.041979 TGAACTATCTATCAAGTGGCATGCTA 59.958 38.462 18.92 9.16 0.00 3.49
727 729 6.617782 ACTATCTATCAAGTGGCATGCTAT 57.382 37.500 18.92 0.35 0.00 2.97
728 730 6.404708 ACTATCTATCAAGTGGCATGCTATG 58.595 40.000 18.92 8.04 0.00 2.23
729 731 4.694760 TCTATCAAGTGGCATGCTATGT 57.305 40.909 18.92 0.00 0.00 2.29
730 732 4.383173 TCTATCAAGTGGCATGCTATGTG 58.617 43.478 18.92 13.53 0.00 3.21
731 733 1.097232 TCAAGTGGCATGCTATGTGC 58.903 50.000 18.92 0.00 41.78 4.57
732 734 0.248336 CAAGTGGCATGCTATGTGCG 60.248 55.000 18.92 0.00 46.63 5.34
733 735 0.392863 AAGTGGCATGCTATGTGCGA 60.393 50.000 18.92 0.00 46.63 5.10
734 736 0.392863 AGTGGCATGCTATGTGCGAA 60.393 50.000 18.92 0.00 46.63 4.70
735 737 0.451383 GTGGCATGCTATGTGCGAAA 59.549 50.000 18.92 0.00 46.63 3.46
736 738 0.451383 TGGCATGCTATGTGCGAAAC 59.549 50.000 18.92 0.00 46.63 2.78
737 739 0.734889 GGCATGCTATGTGCGAAACT 59.265 50.000 18.92 0.00 46.63 2.66
738 740 1.939934 GGCATGCTATGTGCGAAACTA 59.060 47.619 18.92 0.00 46.63 2.24
739 741 2.549754 GGCATGCTATGTGCGAAACTAT 59.450 45.455 18.92 0.00 46.63 2.12
740 742 3.003689 GGCATGCTATGTGCGAAACTATT 59.996 43.478 18.92 0.00 46.63 1.73
741 743 4.498009 GGCATGCTATGTGCGAAACTATTT 60.498 41.667 18.92 0.00 46.63 1.40
742 744 5.277779 GGCATGCTATGTGCGAAACTATTTA 60.278 40.000 18.92 0.00 46.63 1.40
743 745 6.373779 GCATGCTATGTGCGAAACTATTTAT 58.626 36.000 11.37 0.00 46.63 1.40
744 746 6.521133 GCATGCTATGTGCGAAACTATTTATC 59.479 38.462 11.37 0.00 46.63 1.75
745 747 7.571983 GCATGCTATGTGCGAAACTATTTATCT 60.572 37.037 11.37 0.00 46.63 1.98
746 748 8.925700 CATGCTATGTGCGAAACTATTTATCTA 58.074 33.333 0.00 0.00 46.63 1.98
747 749 8.520835 TGCTATGTGCGAAACTATTTATCTAG 57.479 34.615 0.00 0.00 46.63 2.43
748 750 7.116376 TGCTATGTGCGAAACTATTTATCTAGC 59.884 37.037 0.00 0.00 46.63 3.42
749 751 7.116376 GCTATGTGCGAAACTATTTATCTAGCA 59.884 37.037 0.00 0.00 0.00 3.49
750 752 6.828502 TGTGCGAAACTATTTATCTAGCAG 57.171 37.500 0.00 0.00 32.51 4.24
751 753 6.338146 TGTGCGAAACTATTTATCTAGCAGT 58.662 36.000 0.00 0.00 32.51 4.40
752 754 6.816640 TGTGCGAAACTATTTATCTAGCAGTT 59.183 34.615 0.00 0.00 32.51 3.16
753 755 7.333423 TGTGCGAAACTATTTATCTAGCAGTTT 59.667 33.333 0.00 0.00 40.99 2.66
754 756 8.814235 GTGCGAAACTATTTATCTAGCAGTTTA 58.186 33.333 0.00 0.00 39.02 2.01
755 757 9.373603 TGCGAAACTATTTATCTAGCAGTTTAA 57.626 29.630 0.00 0.00 39.02 1.52
773 775 8.924691 GCAGTTTAATTTGCTTGTATTTGATGA 58.075 29.630 4.86 0.00 37.35 2.92
784 786 9.448438 TGCTTGTATTTGATGAACTATACTTGT 57.552 29.630 0.00 0.00 0.00 3.16
785 787 9.708222 GCTTGTATTTGATGAACTATACTTGTG 57.292 33.333 0.00 0.00 0.00 3.33
787 789 9.952030 TTGTATTTGATGAACTATACTTGTGGA 57.048 29.630 0.00 0.00 0.00 4.02
788 790 9.952030 TGTATTTGATGAACTATACTTGTGGAA 57.048 29.630 0.00 0.00 0.00 3.53
792 794 8.997621 TTGATGAACTATACTTGTGGAACTAC 57.002 34.615 0.00 0.00 38.04 2.73
793 795 8.362464 TGATGAACTATACTTGTGGAACTACT 57.638 34.615 0.00 0.00 38.04 2.57
794 796 8.251026 TGATGAACTATACTTGTGGAACTACTG 58.749 37.037 0.00 0.00 38.04 2.74
795 797 7.534723 TGAACTATACTTGTGGAACTACTGT 57.465 36.000 0.00 0.00 38.04 3.55
796 798 7.375834 TGAACTATACTTGTGGAACTACTGTG 58.624 38.462 0.00 0.00 38.04 3.66
797 799 7.231925 TGAACTATACTTGTGGAACTACTGTGA 59.768 37.037 0.00 0.00 38.04 3.58
798 800 7.719871 ACTATACTTGTGGAACTACTGTGAT 57.280 36.000 0.00 0.00 38.04 3.06
799 801 7.548097 ACTATACTTGTGGAACTACTGTGATG 58.452 38.462 0.00 0.00 38.04 3.07
800 802 4.689612 ACTTGTGGAACTACTGTGATGT 57.310 40.909 0.00 0.00 38.04 3.06
801 803 5.036117 ACTTGTGGAACTACTGTGATGTT 57.964 39.130 0.00 0.00 38.04 2.71
802 804 5.437060 ACTTGTGGAACTACTGTGATGTTT 58.563 37.500 0.00 0.00 38.04 2.83
803 805 6.588204 ACTTGTGGAACTACTGTGATGTTTA 58.412 36.000 0.00 0.00 38.04 2.01
804 806 7.224297 ACTTGTGGAACTACTGTGATGTTTAT 58.776 34.615 0.00 0.00 38.04 1.40
805 807 7.719633 ACTTGTGGAACTACTGTGATGTTTATT 59.280 33.333 0.00 0.00 38.04 1.40
806 808 7.433708 TGTGGAACTACTGTGATGTTTATTG 57.566 36.000 0.00 0.00 38.04 1.90
807 809 6.995686 TGTGGAACTACTGTGATGTTTATTGT 59.004 34.615 0.00 0.00 38.04 2.71
808 810 7.041440 TGTGGAACTACTGTGATGTTTATTGTG 60.041 37.037 0.00 0.00 38.04 3.33
809 811 6.072728 TGGAACTACTGTGATGTTTATTGTGC 60.073 38.462 0.00 0.00 0.00 4.57
810 812 5.530519 ACTACTGTGATGTTTATTGTGCG 57.469 39.130 0.00 0.00 0.00 5.34
811 813 5.234752 ACTACTGTGATGTTTATTGTGCGA 58.765 37.500 0.00 0.00 0.00 5.10
812 814 5.699001 ACTACTGTGATGTTTATTGTGCGAA 59.301 36.000 0.00 0.00 0.00 4.70
813 815 4.783242 ACTGTGATGTTTATTGTGCGAAC 58.217 39.130 0.00 0.00 0.00 3.95
814 816 4.515191 ACTGTGATGTTTATTGTGCGAACT 59.485 37.500 0.00 0.00 0.00 3.01
815 817 5.699001 ACTGTGATGTTTATTGTGCGAACTA 59.301 36.000 0.00 0.00 0.00 2.24
816 818 6.203915 ACTGTGATGTTTATTGTGCGAACTAA 59.796 34.615 0.00 0.00 0.00 2.24
817 819 6.960468 TGTGATGTTTATTGTGCGAACTAAA 58.040 32.000 0.00 0.00 0.00 1.85
818 820 7.589395 TGTGATGTTTATTGTGCGAACTAAAT 58.411 30.769 0.00 0.00 0.00 1.40
819 821 7.536964 TGTGATGTTTATTGTGCGAACTAAATG 59.463 33.333 0.00 0.00 0.00 2.32
820 822 7.537306 GTGATGTTTATTGTGCGAACTAAATGT 59.463 33.333 0.00 0.00 0.00 2.71
821 823 8.079203 TGATGTTTATTGTGCGAACTAAATGTT 58.921 29.630 0.00 0.00 42.38 2.71
822 824 8.810652 ATGTTTATTGTGCGAACTAAATGTTT 57.189 26.923 0.00 0.00 39.30 2.83
823 825 8.055609 TGTTTATTGTGCGAACTAAATGTTTG 57.944 30.769 0.00 0.00 41.77 2.93
824 826 7.915923 TGTTTATTGTGCGAACTAAATGTTTGA 59.084 29.630 0.00 0.00 41.46 2.69
825 827 8.747666 GTTTATTGTGCGAACTAAATGTTTGAA 58.252 29.630 0.00 0.00 41.46 2.69
826 828 8.858003 TTATTGTGCGAACTAAATGTTTGAAA 57.142 26.923 0.00 0.00 41.46 2.69
827 829 7.945033 ATTGTGCGAACTAAATGTTTGAAAT 57.055 28.000 0.00 0.00 41.46 2.17
828 830 6.984740 TGTGCGAACTAAATGTTTGAAATC 57.015 33.333 0.00 0.00 41.46 2.17
829 831 5.623264 TGTGCGAACTAAATGTTTGAAATCG 59.377 36.000 0.00 0.00 41.46 3.34
830 832 5.849081 GTGCGAACTAAATGTTTGAAATCGA 59.151 36.000 0.00 0.00 41.46 3.59
831 833 6.358558 GTGCGAACTAAATGTTTGAAATCGAA 59.641 34.615 0.00 0.00 41.46 3.71
832 834 7.060633 GTGCGAACTAAATGTTTGAAATCGAAT 59.939 33.333 0.00 0.00 41.46 3.34
833 835 8.231161 TGCGAACTAAATGTTTGAAATCGAATA 58.769 29.630 0.00 0.00 41.46 1.75
834 836 8.725046 GCGAACTAAATGTTTGAAATCGAATAG 58.275 33.333 0.00 0.00 41.46 1.73
835 837 9.210426 CGAACTAAATGTTTGAAATCGAATAGG 57.790 33.333 0.00 0.00 41.46 2.57
842 844 9.793252 AATGTTTGAAATCGAATAGGAAATCTG 57.207 29.630 0.00 0.00 0.00 2.90
843 845 7.761409 TGTTTGAAATCGAATAGGAAATCTGG 58.239 34.615 0.00 0.00 0.00 3.86
844 846 7.393234 TGTTTGAAATCGAATAGGAAATCTGGT 59.607 33.333 0.00 0.00 0.00 4.00
845 847 6.925610 TGAAATCGAATAGGAAATCTGGTG 57.074 37.500 0.00 0.00 0.00 4.17
846 848 6.649155 TGAAATCGAATAGGAAATCTGGTGA 58.351 36.000 0.00 0.00 0.00 4.02
847 849 7.109501 TGAAATCGAATAGGAAATCTGGTGAA 58.890 34.615 0.00 0.00 0.00 3.18
848 850 7.280876 TGAAATCGAATAGGAAATCTGGTGAAG 59.719 37.037 0.00 0.00 0.00 3.02
849 851 5.677319 TCGAATAGGAAATCTGGTGAAGT 57.323 39.130 0.00 0.00 0.00 3.01
850 852 6.049955 TCGAATAGGAAATCTGGTGAAGTT 57.950 37.500 0.00 0.00 0.00 2.66
851 853 6.472887 TCGAATAGGAAATCTGGTGAAGTTT 58.527 36.000 0.00 0.00 0.00 2.66
852 854 7.617225 TCGAATAGGAAATCTGGTGAAGTTTA 58.383 34.615 0.00 0.00 0.00 2.01
853 855 7.548075 TCGAATAGGAAATCTGGTGAAGTTTAC 59.452 37.037 0.00 0.00 0.00 2.01
854 856 7.464178 CGAATAGGAAATCTGGTGAAGTTTACG 60.464 40.741 0.00 0.00 0.00 3.18
855 857 4.324267 AGGAAATCTGGTGAAGTTTACGG 58.676 43.478 0.00 0.00 0.00 4.02
856 858 3.439129 GGAAATCTGGTGAAGTTTACGGG 59.561 47.826 0.00 0.00 0.00 5.28
857 859 4.320870 GAAATCTGGTGAAGTTTACGGGA 58.679 43.478 0.00 0.00 0.00 5.14
858 860 4.569719 AATCTGGTGAAGTTTACGGGAT 57.430 40.909 0.00 0.00 0.00 3.85
859 861 3.604875 TCTGGTGAAGTTTACGGGATC 57.395 47.619 0.00 0.00 0.00 3.36
860 862 3.170717 TCTGGTGAAGTTTACGGGATCT 58.829 45.455 0.00 0.00 0.00 2.75
861 863 4.346730 TCTGGTGAAGTTTACGGGATCTA 58.653 43.478 0.00 0.00 0.00 1.98
862 864 4.960469 TCTGGTGAAGTTTACGGGATCTAT 59.040 41.667 0.00 0.00 0.00 1.98
863 865 5.424252 TCTGGTGAAGTTTACGGGATCTATT 59.576 40.000 0.00 0.00 0.00 1.73
864 866 5.667466 TGGTGAAGTTTACGGGATCTATTC 58.333 41.667 0.00 0.00 0.00 1.75
865 867 5.424252 TGGTGAAGTTTACGGGATCTATTCT 59.576 40.000 0.00 0.00 0.00 2.40
866 868 6.608405 TGGTGAAGTTTACGGGATCTATTCTA 59.392 38.462 0.00 0.00 0.00 2.10
867 869 7.289317 TGGTGAAGTTTACGGGATCTATTCTAT 59.711 37.037 0.00 0.00 0.00 1.98
868 870 7.813627 GGTGAAGTTTACGGGATCTATTCTATC 59.186 40.741 0.00 0.00 0.00 2.08
869 871 7.537991 GTGAAGTTTACGGGATCTATTCTATCG 59.462 40.741 0.00 0.00 0.00 2.92
870 872 7.446319 TGAAGTTTACGGGATCTATTCTATCGA 59.554 37.037 0.00 0.00 0.00 3.59
871 873 7.941431 AGTTTACGGGATCTATTCTATCGAT 57.059 36.000 2.16 2.16 0.00 3.59
872 874 7.987649 AGTTTACGGGATCTATTCTATCGATC 58.012 38.462 0.00 0.00 34.30 3.69
873 875 7.830201 AGTTTACGGGATCTATTCTATCGATCT 59.170 37.037 0.00 0.00 35.18 2.75
874 876 7.555306 TTACGGGATCTATTCTATCGATCTG 57.445 40.000 0.00 0.00 35.18 2.90
875 877 5.502079 ACGGGATCTATTCTATCGATCTGT 58.498 41.667 0.00 0.00 35.18 3.41
876 878 5.587043 ACGGGATCTATTCTATCGATCTGTC 59.413 44.000 0.00 0.00 35.18 3.51
877 879 5.008217 CGGGATCTATTCTATCGATCTGTCC 59.992 48.000 0.00 0.00 35.18 4.02
878 880 5.008217 GGGATCTATTCTATCGATCTGTCCG 59.992 48.000 0.00 0.00 35.18 4.79
879 881 4.948608 TCTATTCTATCGATCTGTCCGC 57.051 45.455 0.00 0.00 0.00 5.54
880 882 4.580868 TCTATTCTATCGATCTGTCCGCT 58.419 43.478 0.00 0.00 0.00 5.52
881 883 3.567576 ATTCTATCGATCTGTCCGCTG 57.432 47.619 0.00 0.00 0.00 5.18
882 884 1.968704 TCTATCGATCTGTCCGCTGT 58.031 50.000 0.00 0.00 0.00 4.40
883 885 1.874231 TCTATCGATCTGTCCGCTGTC 59.126 52.381 0.00 0.00 0.00 3.51
884 886 0.952280 TATCGATCTGTCCGCTGTCC 59.048 55.000 0.00 0.00 0.00 4.02
885 887 1.739338 ATCGATCTGTCCGCTGTCCC 61.739 60.000 0.00 0.00 0.00 4.46
886 888 2.105128 GATCTGTCCGCTGTCCCG 59.895 66.667 0.00 0.00 0.00 5.14
887 889 4.148825 ATCTGTCCGCTGTCCCGC 62.149 66.667 0.00 0.00 0.00 6.13
889 891 4.680237 CTGTCCGCTGTCCCGCAA 62.680 66.667 0.00 0.00 0.00 4.85
890 892 4.243008 TGTCCGCTGTCCCGCAAA 62.243 61.111 0.00 0.00 0.00 3.68
891 893 2.746277 GTCCGCTGTCCCGCAAAT 60.746 61.111 0.00 0.00 0.00 2.32
892 894 2.033448 TCCGCTGTCCCGCAAATT 59.967 55.556 0.00 0.00 0.00 1.82
893 895 1.602323 TCCGCTGTCCCGCAAATTT 60.602 52.632 0.00 0.00 0.00 1.82
894 896 1.175983 TCCGCTGTCCCGCAAATTTT 61.176 50.000 0.00 0.00 0.00 1.82
895 897 1.008361 CCGCTGTCCCGCAAATTTTG 61.008 55.000 4.72 4.72 0.00 2.44
896 898 0.318614 CGCTGTCCCGCAAATTTTGT 60.319 50.000 10.65 0.00 0.00 2.83
897 899 1.864565 GCTGTCCCGCAAATTTTGTT 58.135 45.000 10.65 0.00 0.00 2.83
898 900 2.209273 GCTGTCCCGCAAATTTTGTTT 58.791 42.857 10.65 0.00 0.00 2.83
899 901 3.385577 GCTGTCCCGCAAATTTTGTTTA 58.614 40.909 10.65 0.00 0.00 2.01
900 902 3.183574 GCTGTCCCGCAAATTTTGTTTAC 59.816 43.478 10.65 5.40 0.00 2.01
901 903 4.363999 CTGTCCCGCAAATTTTGTTTACA 58.636 39.130 10.65 8.94 0.00 2.41
902 904 4.113354 TGTCCCGCAAATTTTGTTTACAC 58.887 39.130 10.65 3.16 0.00 2.90
903 905 4.142138 TGTCCCGCAAATTTTGTTTACACT 60.142 37.500 10.65 0.00 0.00 3.55
904 906 5.067413 TGTCCCGCAAATTTTGTTTACACTA 59.933 36.000 10.65 0.00 0.00 2.74
905 907 6.153756 GTCCCGCAAATTTTGTTTACACTAT 58.846 36.000 10.65 0.00 0.00 2.12
906 908 7.040617 TGTCCCGCAAATTTTGTTTACACTATA 60.041 33.333 10.65 0.00 0.00 1.31
907 909 7.271868 GTCCCGCAAATTTTGTTTACACTATAC 59.728 37.037 10.65 0.00 0.00 1.47
908 910 6.528774 CCCGCAAATTTTGTTTACACTATACC 59.471 38.462 10.65 0.00 0.00 2.73
909 911 6.249682 CCGCAAATTTTGTTTACACTATACCG 59.750 38.462 10.65 1.54 0.00 4.02
910 912 6.249682 CGCAAATTTTGTTTACACTATACCGG 59.750 38.462 10.65 0.00 0.00 5.28
911 913 7.306953 GCAAATTTTGTTTACACTATACCGGA 58.693 34.615 9.46 0.00 0.00 5.14
912 914 7.971722 GCAAATTTTGTTTACACTATACCGGAT 59.028 33.333 9.46 0.00 0.00 4.18
913 915 9.284594 CAAATTTTGTTTACACTATACCGGATG 57.715 33.333 9.46 0.16 0.00 3.51
914 916 8.570068 AATTTTGTTTACACTATACCGGATGT 57.430 30.769 9.46 6.88 0.00 3.06
915 917 6.971527 TTTGTTTACACTATACCGGATGTG 57.028 37.500 9.46 13.45 36.59 3.21
916 918 4.435425 TGTTTACACTATACCGGATGTGC 58.565 43.478 9.46 0.00 34.14 4.57
917 919 4.160814 TGTTTACACTATACCGGATGTGCT 59.839 41.667 9.46 5.13 34.14 4.40
918 920 5.360429 TGTTTACACTATACCGGATGTGCTA 59.640 40.000 9.46 4.27 34.14 3.49
919 921 5.700722 TTACACTATACCGGATGTGCTAG 57.299 43.478 9.46 1.92 34.14 3.42
920 922 3.828921 ACACTATACCGGATGTGCTAGA 58.171 45.455 9.46 0.00 34.14 2.43
921 923 3.821600 ACACTATACCGGATGTGCTAGAG 59.178 47.826 9.46 0.00 34.14 2.43
922 924 4.072839 CACTATACCGGATGTGCTAGAGA 58.927 47.826 9.46 0.00 0.00 3.10
923 925 4.702612 CACTATACCGGATGTGCTAGAGAT 59.297 45.833 9.46 0.00 0.00 2.75
924 926 4.702612 ACTATACCGGATGTGCTAGAGATG 59.297 45.833 9.46 0.00 0.00 2.90
925 927 0.390860 ACCGGATGTGCTAGAGATGC 59.609 55.000 9.46 0.00 0.00 3.91
926 928 0.678395 CCGGATGTGCTAGAGATGCT 59.322 55.000 0.00 0.00 0.00 3.79
927 929 1.336702 CCGGATGTGCTAGAGATGCTC 60.337 57.143 0.00 0.00 0.00 4.26
928 930 1.612950 CGGATGTGCTAGAGATGCTCT 59.387 52.381 0.00 2.22 43.83 4.09
931 933 4.615682 CGGATGTGCTAGAGATGCTCTAAG 60.616 50.000 5.75 2.42 41.74 2.18
937 939 4.959210 TGCTAGAGATGCTCTAAGAGGTTT 59.041 41.667 5.75 0.00 41.74 3.27
955 957 4.278419 AGGTTTCTTCTGTAAATGTGCCAC 59.722 41.667 0.00 0.00 0.00 5.01
984 986 2.094494 CGCATTAGCTCCATCGTATCCT 60.094 50.000 0.00 0.00 39.10 3.24
1035 1037 1.831106 TCGTTGCATCTGGTGGATACT 59.169 47.619 0.00 0.00 32.64 2.12
1040 1042 3.378512 TGCATCTGGTGGATACTCTCTT 58.621 45.455 0.00 0.00 32.64 2.85
1043 1045 3.107402 TCTGGTGGATACTCTCTTGCT 57.893 47.619 0.00 0.00 37.61 3.91
1051 1053 0.615331 TACTCTCTTGCTTGGCCTGG 59.385 55.000 3.32 0.00 0.00 4.45
1151 1156 0.341961 ATGCCTACTACCCCTCACCA 59.658 55.000 0.00 0.00 0.00 4.17
1206 1211 2.182842 CCCTTCACCTAGCATGCGC 61.183 63.158 13.01 0.00 38.99 6.09
1212 1217 0.745845 CACCTAGCATGCGCCTTCTT 60.746 55.000 13.01 0.00 39.83 2.52
1296 1301 0.105709 CTCCCCTCCTCTCCTTCCTC 60.106 65.000 0.00 0.00 0.00 3.71
1351 1356 8.169268 GTGTAGTGCTTCTGTGTATTTGTATTC 58.831 37.037 0.00 0.00 0.00 1.75
1367 1372 5.883503 TGTATTCGGGATTGTTTGTTACC 57.116 39.130 0.00 0.00 0.00 2.85
1430 1435 8.192774 TGAATTAATTGTGCTGAATGAATCTCC 58.807 33.333 5.17 0.00 0.00 3.71
1578 1679 6.011981 TGTTAACTCCCATCCCACTTCTTATT 60.012 38.462 7.22 0.00 0.00 1.40
1581 1682 4.410555 ACTCCCATCCCACTTCTTATTCTC 59.589 45.833 0.00 0.00 0.00 2.87
1835 1950 4.735369 TGTTCATTTCAGGGTGTGGTATT 58.265 39.130 0.00 0.00 0.00 1.89
1836 1951 4.522405 TGTTCATTTCAGGGTGTGGTATTG 59.478 41.667 0.00 0.00 0.00 1.90
1910 2061 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1912 2063 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1914 2065 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1916 2067 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1917 2068 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
1918 2069 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1919 2070 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
1920 2071 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1921 2072 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
1923 2074 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
1925 2076 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
1926 2077 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1927 2078 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
1928 2079 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1929 2080 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
1930 2081 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1931 2082 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
1932 2083 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1933 2084 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
1934 2085 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1935 2086 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
1936 2087 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1938 2089 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1939 2090 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
1942 2093 1.136085 GTGTGTGTGTGTGTGTGTGTC 60.136 52.381 0.00 0.00 0.00 3.67
1995 2318 5.865552 CCTCATGAGTTGGTGCTTATTTTTG 59.134 40.000 21.11 0.00 0.00 2.44
2318 2641 1.421268 TGGCCTTCTGTTCTGATGTGT 59.579 47.619 3.32 0.00 0.00 3.72
2344 2667 1.612199 GGTTCAGTTCCACGCCCAATA 60.612 52.381 0.00 0.00 0.00 1.90
2456 2780 1.266718 CCCACAACGTTCTTGACATGG 59.733 52.381 0.00 0.00 0.00 3.66
2464 2788 2.157738 GTTCTTGACATGGCTCAGCTT 58.842 47.619 0.00 0.00 0.00 3.74
2472 2796 2.038952 ACATGGCTCAGCTTACAACTCA 59.961 45.455 0.00 0.00 0.00 3.41
2479 2803 7.109501 TGGCTCAGCTTACAACTCATAATTAA 58.890 34.615 0.00 0.00 0.00 1.40
2505 2829 1.542472 TGTCCTGCACAATGCTCAATG 59.458 47.619 2.02 0.00 45.31 2.82
2509 2833 2.029739 CCTGCACAATGCTCAATGTCAA 60.030 45.455 2.02 0.00 45.31 3.18
2516 2840 7.388224 TGCACAATGCTCAATGTCAATAATTTT 59.612 29.630 2.02 0.00 45.31 1.82
2572 2896 2.629617 AGAATTCCTTTGCCCTGTTGTG 59.370 45.455 0.65 0.00 0.00 3.33
2587 2911 0.469705 TTGTGTCCCCTTGCTGCAAT 60.470 50.000 16.38 0.00 0.00 3.56
2632 2956 2.646930 TGATGATTGGTCTGATGGTGC 58.353 47.619 0.00 0.00 0.00 5.01
2638 2962 2.352422 GTCTGATGGTGCCAGGCA 59.648 61.111 11.22 11.22 36.35 4.75
2647 2971 1.380246 GTGCCAGGCAATGATGGGA 60.380 57.895 18.28 1.61 41.47 4.37
2689 3013 1.473434 GCGATGAATCCGAAAGAGGGT 60.473 52.381 0.00 0.00 0.00 4.34
2702 3026 2.282958 AGGGTTCGAGGAGCGTGA 60.283 61.111 0.00 0.00 41.80 4.35
2780 3104 8.924511 AATGGAGAAATACAAGTGAAGAAGAA 57.075 30.769 0.00 0.00 0.00 2.52
3014 3339 0.396435 TTCAGAGACATGGCGGTGTT 59.604 50.000 0.00 0.00 31.16 3.32
3027 3352 2.414957 GGCGGTGTTCCTTAATTTTCGG 60.415 50.000 0.00 0.00 0.00 4.30
3137 3465 2.680370 GGGAGGGGGACTGCGAATT 61.680 63.158 0.00 0.00 38.63 2.17
3186 3514 2.866762 CAGCTAGAAACCGTATGCTTCC 59.133 50.000 0.00 0.00 0.00 3.46
3191 3522 5.335348 GCTAGAAACCGTATGCTTCCAAAAA 60.335 40.000 0.00 0.00 0.00 1.94
3242 3573 4.434593 GCATCTTAATTTTGCCTGTTTGCG 60.435 41.667 0.00 0.00 0.00 4.85
3252 3583 4.250116 TGCCTGTTTGCGTCAATAATTT 57.750 36.364 0.00 0.00 0.00 1.82
3442 3773 0.528470 CTCGACCCTGTCCAGTTCTC 59.472 60.000 0.00 0.00 0.00 2.87
3456 3790 3.868077 CCAGTTCTCGATCCAGTTTCATC 59.132 47.826 0.00 0.00 0.00 2.92
3469 3803 4.023707 CCAGTTTCATCTTGTCTTGGTCAC 60.024 45.833 0.00 0.00 0.00 3.67
3476 3810 1.334869 CTTGTCTTGGTCACTGTTGCC 59.665 52.381 0.00 0.00 0.00 4.52
3477 3811 0.254462 TGTCTTGGTCACTGTTGCCA 59.746 50.000 0.00 0.00 0.00 4.92
3481 3815 0.107643 TTGGTCACTGTTGCCATCGA 59.892 50.000 0.00 0.00 31.52 3.59
3484 3818 1.675714 GGTCACTGTTGCCATCGATGA 60.676 52.381 26.86 4.68 0.00 2.92
3485 3819 2.283298 GTCACTGTTGCCATCGATGAT 58.717 47.619 26.86 0.26 0.00 2.45
3494 3828 2.281070 ATCGATGATGGTGGCGGC 60.281 61.111 0.00 0.00 0.00 6.53
3543 3877 4.100653 AGCTCCTTCTCGATGATGATGAAA 59.899 41.667 0.00 0.00 0.00 2.69
3552 3886 2.715749 TGATGATGAAACCAGCCGAT 57.284 45.000 0.00 0.00 0.00 4.18
3591 3937 3.138930 CTGGATGCCATGCTGCTGC 62.139 63.158 8.89 8.89 40.20 5.25
3592 3938 2.833582 GGATGCCATGCTGCTGCT 60.834 61.111 17.00 0.00 40.48 4.24
3593 3939 2.413351 GATGCCATGCTGCTGCTG 59.587 61.111 17.00 11.64 40.48 4.41
3594 3940 3.774959 GATGCCATGCTGCTGCTGC 62.775 63.158 22.51 22.51 40.48 5.25
3596 3942 4.498520 GCCATGCTGCTGCTGCTG 62.499 66.667 27.67 21.90 40.48 4.41
3605 3951 3.738246 CTGCTGCTGCTGCTGGTG 61.738 66.667 27.67 13.98 40.48 4.17
3608 3954 3.362797 CTGCTGCTGCTGGTGGTG 61.363 66.667 17.00 0.00 40.48 4.17
3609 3955 4.960866 TGCTGCTGCTGGTGGTGG 62.961 66.667 17.00 0.00 40.48 4.61
3610 3956 4.962836 GCTGCTGCTGGTGGTGGT 62.963 66.667 8.53 0.00 36.03 4.16
3611 3957 2.981909 CTGCTGCTGGTGGTGGTG 60.982 66.667 0.00 0.00 0.00 4.17
3711 4057 1.827399 CGGTAGAAGGTGGTGGCAGT 61.827 60.000 0.00 0.00 0.00 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 0.972983 CTCTCTTCCTCCCGAGCCAA 60.973 60.000 0.00 0.00 0.00 4.52
24 25 1.388547 CTCACTCTCTTCCTCCCGAG 58.611 60.000 0.00 0.00 0.00 4.63
72 73 0.175989 CTCTAGGGTTCCAAGACGGC 59.824 60.000 0.00 0.00 33.14 5.68
94 95 1.099689 CCTTGTCTCTCTCGGTCCTC 58.900 60.000 0.00 0.00 0.00 3.71
96 97 0.323542 TCCCTTGTCTCTCTCGGTCC 60.324 60.000 0.00 0.00 0.00 4.46
98 99 0.406361 AGTCCCTTGTCTCTCTCGGT 59.594 55.000 0.00 0.00 0.00 4.69
127 128 4.527038 TCTTCTCTCGGTACACCAAGAATT 59.473 41.667 0.00 0.00 32.12 2.17
157 158 1.337260 CCAACTGAACTCCACCTCTCG 60.337 57.143 0.00 0.00 0.00 4.04
171 172 7.826252 TCTTTCCATCTCTCTTTTATCCAACTG 59.174 37.037 0.00 0.00 0.00 3.16
186 187 3.058224 CCACGTTGGTTTCTTTCCATCTC 60.058 47.826 0.00 0.00 34.75 2.75
187 188 2.884639 CCACGTTGGTTTCTTTCCATCT 59.115 45.455 0.00 0.00 34.75 2.90
190 191 1.341187 ACCCACGTTGGTTTCTTTCCA 60.341 47.619 5.28 0.00 33.91 3.53
191 192 1.066454 CACCCACGTTGGTTTCTTTCC 59.934 52.381 8.93 0.00 36.12 3.13
192 193 2.018515 TCACCCACGTTGGTTTCTTTC 58.981 47.619 8.93 0.00 36.12 2.62
199 200 2.559922 TTTGCCTCACCCACGTTGGT 62.560 55.000 5.28 5.28 39.96 3.67
203 204 0.106918 TTTCTTTGCCTCACCCACGT 60.107 50.000 0.00 0.00 0.00 4.49
205 206 2.031870 AGTTTTCTTTGCCTCACCCAC 58.968 47.619 0.00 0.00 0.00 4.61
209 210 2.884639 TGCCTAGTTTTCTTTGCCTCAC 59.115 45.455 0.00 0.00 0.00 3.51
219 220 5.525199 TCGGTTCATTTTTGCCTAGTTTTC 58.475 37.500 0.00 0.00 0.00 2.29
222 223 4.764823 TCATCGGTTCATTTTTGCCTAGTT 59.235 37.500 0.00 0.00 0.00 2.24
224 225 4.201950 CCTCATCGGTTCATTTTTGCCTAG 60.202 45.833 0.00 0.00 0.00 3.02
225 226 3.694072 CCTCATCGGTTCATTTTTGCCTA 59.306 43.478 0.00 0.00 0.00 3.93
227 228 2.491693 TCCTCATCGGTTCATTTTTGCC 59.508 45.455 0.00 0.00 0.00 4.52
228 229 3.440173 TCTCCTCATCGGTTCATTTTTGC 59.560 43.478 0.00 0.00 0.00 3.68
236 237 2.223852 GGTAGCTTCTCCTCATCGGTTC 60.224 54.545 0.00 0.00 0.00 3.62
238 239 1.342076 TGGTAGCTTCTCCTCATCGGT 60.342 52.381 0.00 0.00 0.00 4.69
242 243 2.769095 GGAGTTGGTAGCTTCTCCTCAT 59.231 50.000 20.46 0.00 42.02 2.90
243 244 2.180276 GGAGTTGGTAGCTTCTCCTCA 58.820 52.381 20.46 0.00 42.02 3.86
247 248 1.903183 AGTGGGAGTTGGTAGCTTCTC 59.097 52.381 0.00 7.89 0.00 2.87
263 264 8.480133 ACACCTAATATCTACTCCTAAAGTGG 57.520 38.462 0.00 0.00 39.11 4.00
271 272 7.091443 CCGATCAAACACCTAATATCTACTCC 58.909 42.308 0.00 0.00 0.00 3.85
277 278 6.348540 GGATTGCCGATCAAACACCTAATATC 60.349 42.308 0.00 0.00 38.34 1.63
279 280 4.819630 GGATTGCCGATCAAACACCTAATA 59.180 41.667 0.00 0.00 38.34 0.98
296 297 1.883084 CTCGTAGCCGGTGGATTGC 60.883 63.158 1.90 0.00 33.95 3.56
297 298 0.174845 TTCTCGTAGCCGGTGGATTG 59.825 55.000 1.90 0.00 33.95 2.67
306 307 3.502979 AGATCCTCGTATTTCTCGTAGCC 59.497 47.826 0.00 0.00 0.00 3.93
310 311 2.287069 CGCAGATCCTCGTATTTCTCGT 60.287 50.000 0.00 0.00 0.00 4.18
311 312 2.311462 CGCAGATCCTCGTATTTCTCG 58.689 52.381 0.00 0.00 0.00 4.04
312 313 2.293677 TCCGCAGATCCTCGTATTTCTC 59.706 50.000 3.95 0.00 0.00 2.87
314 315 2.667137 CTCCGCAGATCCTCGTATTTC 58.333 52.381 3.95 0.00 0.00 2.17
333 334 1.000283 CGGAGCGGAGAAATAGATGCT 60.000 52.381 0.00 0.00 34.96 3.79
339 340 5.421277 TGAAAATAACGGAGCGGAGAAATA 58.579 37.500 0.00 0.00 0.00 1.40
340 341 4.258543 TGAAAATAACGGAGCGGAGAAAT 58.741 39.130 0.00 0.00 0.00 2.17
351 352 4.201685 CGGAGCTGTAGTTGAAAATAACGG 60.202 45.833 0.00 0.00 35.73 4.44
376 377 1.247419 ACGACTCACTCCTGGAGCAG 61.247 60.000 23.43 20.12 35.79 4.24
378 379 1.214062 CACGACTCACTCCTGGAGC 59.786 63.158 23.43 5.94 35.79 4.70
380 381 0.609406 CTCCACGACTCACTCCTGGA 60.609 60.000 0.00 0.00 34.10 3.86
383 384 3.688086 GCTCCACGACTCACTCCT 58.312 61.111 0.00 0.00 0.00 3.69
401 403 1.079057 GCTTGTTCGGAGTCCCTCC 60.079 63.158 2.80 0.00 46.44 4.30
421 423 9.624037 TCTCTACTCCTAAATCTCTACTCCTAT 57.376 37.037 0.00 0.00 0.00 2.57
429 431 8.058847 ACAGTTGATCTCTACTCCTAAATCTCT 58.941 37.037 0.00 0.00 29.82 3.10
430 432 8.232913 ACAGTTGATCTCTACTCCTAAATCTC 57.767 38.462 0.00 0.00 29.82 2.75
431 433 9.349713 CTACAGTTGATCTCTACTCCTAAATCT 57.650 37.037 0.00 0.00 29.82 2.40
432 434 9.127277 ACTACAGTTGATCTCTACTCCTAAATC 57.873 37.037 0.00 0.00 29.82 2.17
433 435 9.482175 AACTACAGTTGATCTCTACTCCTAAAT 57.518 33.333 0.00 0.00 36.80 1.40
434 436 8.880991 AACTACAGTTGATCTCTACTCCTAAA 57.119 34.615 0.00 0.00 36.80 1.85
435 437 9.970553 TTAACTACAGTTGATCTCTACTCCTAA 57.029 33.333 4.86 0.00 38.90 2.69
436 438 9.616156 CTTAACTACAGTTGATCTCTACTCCTA 57.384 37.037 4.86 0.00 38.90 2.94
437 439 8.330247 TCTTAACTACAGTTGATCTCTACTCCT 58.670 37.037 4.86 0.00 38.90 3.69
438 440 8.508883 TCTTAACTACAGTTGATCTCTACTCC 57.491 38.462 4.86 0.00 38.90 3.85
439 441 8.617809 CCTCTTAACTACAGTTGATCTCTACTC 58.382 40.741 4.86 0.00 38.90 2.59
451 453 5.839606 ACAGAAGGAACCTCTTAACTACAGT 59.160 40.000 0.00 0.00 0.00 3.55
455 457 8.488308 AACTTACAGAAGGAACCTCTTAACTA 57.512 34.615 0.00 0.00 36.95 2.24
498 500 7.428826 CACATTTACAGAAGGAAGCTCTTTTT 58.571 34.615 0.00 0.00 0.00 1.94
499 501 6.515696 GCACATTTACAGAAGGAAGCTCTTTT 60.516 38.462 0.00 0.00 0.00 2.27
500 502 5.048434 GCACATTTACAGAAGGAAGCTCTTT 60.048 40.000 0.00 0.00 0.00 2.52
501 503 4.457257 GCACATTTACAGAAGGAAGCTCTT 59.543 41.667 0.00 0.00 0.00 2.85
502 504 4.006319 GCACATTTACAGAAGGAAGCTCT 58.994 43.478 0.00 0.00 0.00 4.09
503 505 3.127721 GGCACATTTACAGAAGGAAGCTC 59.872 47.826 0.00 0.00 0.00 4.09
504 506 3.084786 GGCACATTTACAGAAGGAAGCT 58.915 45.455 0.00 0.00 0.00 3.74
505 507 2.164422 GGGCACATTTACAGAAGGAAGC 59.836 50.000 0.00 0.00 0.00 3.86
506 508 3.441572 CAGGGCACATTTACAGAAGGAAG 59.558 47.826 0.00 0.00 0.00 3.46
507 509 3.073798 TCAGGGCACATTTACAGAAGGAA 59.926 43.478 0.00 0.00 0.00 3.36
508 510 2.642311 TCAGGGCACATTTACAGAAGGA 59.358 45.455 0.00 0.00 0.00 3.36
509 511 3.012518 CTCAGGGCACATTTACAGAAGG 58.987 50.000 0.00 0.00 0.00 3.46
510 512 3.012518 CCTCAGGGCACATTTACAGAAG 58.987 50.000 0.00 0.00 0.00 2.85
511 513 3.071874 CCTCAGGGCACATTTACAGAA 57.928 47.619 0.00 0.00 0.00 3.02
512 514 2.787473 CCTCAGGGCACATTTACAGA 57.213 50.000 0.00 0.00 0.00 3.41
524 526 0.749454 GCTAATGTGTGGCCTCAGGG 60.749 60.000 7.99 0.00 0.00 4.45
525 527 0.254178 AGCTAATGTGTGGCCTCAGG 59.746 55.000 7.99 0.00 0.00 3.86
526 528 1.661341 GAGCTAATGTGTGGCCTCAG 58.339 55.000 7.99 0.00 0.00 3.35
527 529 0.253044 GGAGCTAATGTGTGGCCTCA 59.747 55.000 3.32 2.96 0.00 3.86
528 530 0.253044 TGGAGCTAATGTGTGGCCTC 59.747 55.000 3.32 0.00 0.00 4.70
529 531 0.921896 ATGGAGCTAATGTGTGGCCT 59.078 50.000 3.32 0.00 0.00 5.19
530 532 1.312815 GATGGAGCTAATGTGTGGCC 58.687 55.000 0.00 0.00 0.00 5.36
531 533 0.940126 CGATGGAGCTAATGTGTGGC 59.060 55.000 0.00 0.00 0.00 5.01
532 534 2.315925 ACGATGGAGCTAATGTGTGG 57.684 50.000 0.00 0.00 0.00 4.17
533 535 3.990469 GGATACGATGGAGCTAATGTGTG 59.010 47.826 0.00 0.00 0.00 3.82
534 536 3.006967 GGGATACGATGGAGCTAATGTGT 59.993 47.826 0.00 0.00 37.60 3.72
535 537 3.259374 AGGGATACGATGGAGCTAATGTG 59.741 47.826 0.00 0.00 37.60 3.21
536 538 3.511477 AGGGATACGATGGAGCTAATGT 58.489 45.455 0.00 0.00 37.60 2.71
537 539 4.021104 TGAAGGGATACGATGGAGCTAATG 60.021 45.833 0.00 0.00 37.60 1.90
538 540 4.021016 GTGAAGGGATACGATGGAGCTAAT 60.021 45.833 0.00 0.00 37.60 1.73
539 541 3.321111 GTGAAGGGATACGATGGAGCTAA 59.679 47.826 0.00 0.00 37.60 3.09
540 542 2.891580 GTGAAGGGATACGATGGAGCTA 59.108 50.000 0.00 0.00 37.60 3.32
541 543 1.689273 GTGAAGGGATACGATGGAGCT 59.311 52.381 0.00 0.00 37.60 4.09
542 544 1.689273 AGTGAAGGGATACGATGGAGC 59.311 52.381 0.00 0.00 37.60 4.70
543 545 3.384789 TGAAGTGAAGGGATACGATGGAG 59.615 47.826 0.00 0.00 37.60 3.86
544 546 3.132289 GTGAAGTGAAGGGATACGATGGA 59.868 47.826 0.00 0.00 37.60 3.41
545 547 3.118775 TGTGAAGTGAAGGGATACGATGG 60.119 47.826 0.00 0.00 37.60 3.51
546 548 4.123497 TGTGAAGTGAAGGGATACGATG 57.877 45.455 0.00 0.00 37.60 3.84
547 549 4.202264 GGATGTGAAGTGAAGGGATACGAT 60.202 45.833 0.00 0.00 37.60 3.73
548 550 3.132289 GGATGTGAAGTGAAGGGATACGA 59.868 47.826 0.00 0.00 37.60 3.43
549 551 3.118775 TGGATGTGAAGTGAAGGGATACG 60.119 47.826 0.00 0.00 37.60 3.06
550 552 4.487714 TGGATGTGAAGTGAAGGGATAC 57.512 45.455 0.00 0.00 0.00 2.24
551 553 5.439721 CATTGGATGTGAAGTGAAGGGATA 58.560 41.667 0.00 0.00 0.00 2.59
552 554 4.275810 CATTGGATGTGAAGTGAAGGGAT 58.724 43.478 0.00 0.00 0.00 3.85
553 555 3.561960 CCATTGGATGTGAAGTGAAGGGA 60.562 47.826 0.00 0.00 0.00 4.20
554 556 2.756760 CCATTGGATGTGAAGTGAAGGG 59.243 50.000 0.00 0.00 0.00 3.95
555 557 2.165030 GCCATTGGATGTGAAGTGAAGG 59.835 50.000 6.95 0.00 0.00 3.46
556 558 2.165030 GGCCATTGGATGTGAAGTGAAG 59.835 50.000 6.95 0.00 0.00 3.02
557 559 2.170166 GGCCATTGGATGTGAAGTGAA 58.830 47.619 6.95 0.00 0.00 3.18
558 560 1.355381 AGGCCATTGGATGTGAAGTGA 59.645 47.619 5.01 0.00 0.00 3.41
559 561 1.843368 AGGCCATTGGATGTGAAGTG 58.157 50.000 5.01 0.00 0.00 3.16
560 562 3.959495 ATAGGCCATTGGATGTGAAGT 57.041 42.857 5.01 0.00 0.00 3.01
561 563 5.336213 GCATAATAGGCCATTGGATGTGAAG 60.336 44.000 5.01 0.00 0.00 3.02
562 564 4.523943 GCATAATAGGCCATTGGATGTGAA 59.476 41.667 5.01 0.00 0.00 3.18
563 565 4.081406 GCATAATAGGCCATTGGATGTGA 58.919 43.478 5.01 0.00 0.00 3.58
564 566 3.119743 CGCATAATAGGCCATTGGATGTG 60.120 47.826 5.01 7.51 0.00 3.21
565 567 3.084039 CGCATAATAGGCCATTGGATGT 58.916 45.455 5.01 0.00 0.00 3.06
566 568 3.084039 ACGCATAATAGGCCATTGGATG 58.916 45.455 5.01 6.00 0.00 3.51
567 569 3.244875 TGACGCATAATAGGCCATTGGAT 60.245 43.478 5.01 0.00 0.00 3.41
568 570 2.105649 TGACGCATAATAGGCCATTGGA 59.894 45.455 5.01 0.00 0.00 3.53
569 571 2.226437 GTGACGCATAATAGGCCATTGG 59.774 50.000 5.01 0.00 0.00 3.16
570 572 2.226437 GGTGACGCATAATAGGCCATTG 59.774 50.000 5.01 0.00 0.00 2.82
571 573 2.504367 GGTGACGCATAATAGGCCATT 58.496 47.619 5.01 5.55 0.00 3.16
572 574 1.271379 GGGTGACGCATAATAGGCCAT 60.271 52.381 5.01 0.00 0.00 4.40
573 575 0.107831 GGGTGACGCATAATAGGCCA 59.892 55.000 5.01 0.00 0.00 5.36
574 576 0.107831 TGGGTGACGCATAATAGGCC 59.892 55.000 0.00 0.00 0.00 5.19
575 577 1.226746 GTGGGTGACGCATAATAGGC 58.773 55.000 5.42 0.00 0.00 3.93
576 578 1.497991 CGTGGGTGACGCATAATAGG 58.502 55.000 5.42 0.00 42.21 2.57
586 588 2.668550 GACTTGCCCGTGGGTGAC 60.669 66.667 6.82 0.00 37.65 3.67
587 589 3.948719 GGACTTGCCCGTGGGTGA 61.949 66.667 6.82 0.00 37.65 4.02
616 618 1.078918 TTCATCCTCGCCAGCACTG 60.079 57.895 0.00 0.00 0.00 3.66
617 619 1.220206 CTTCATCCTCGCCAGCACT 59.780 57.895 0.00 0.00 0.00 4.40
618 620 0.179062 ATCTTCATCCTCGCCAGCAC 60.179 55.000 0.00 0.00 0.00 4.40
619 621 0.179065 CATCTTCATCCTCGCCAGCA 60.179 55.000 0.00 0.00 0.00 4.41
620 622 0.105593 TCATCTTCATCCTCGCCAGC 59.894 55.000 0.00 0.00 0.00 4.85
621 623 1.411977 ACTCATCTTCATCCTCGCCAG 59.588 52.381 0.00 0.00 0.00 4.85
622 624 1.489481 ACTCATCTTCATCCTCGCCA 58.511 50.000 0.00 0.00 0.00 5.69
623 625 2.887783 TCTACTCATCTTCATCCTCGCC 59.112 50.000 0.00 0.00 0.00 5.54
624 626 4.037446 AGTTCTACTCATCTTCATCCTCGC 59.963 45.833 0.00 0.00 0.00 5.03
625 627 5.766150 AGTTCTACTCATCTTCATCCTCG 57.234 43.478 0.00 0.00 0.00 4.63
626 628 7.346751 AGAAGTTCTACTCATCTTCATCCTC 57.653 40.000 2.75 0.00 38.78 3.71
627 629 8.859090 CATAGAAGTTCTACTCATCTTCATCCT 58.141 37.037 14.82 0.00 38.78 3.24
628 630 8.855110 TCATAGAAGTTCTACTCATCTTCATCC 58.145 37.037 14.82 0.00 38.78 3.51
640 642 9.388346 CGACTGATTGTATCATAGAAGTTCTAC 57.612 37.037 14.82 5.34 38.85 2.59
641 643 9.121658 ACGACTGATTGTATCATAGAAGTTCTA 57.878 33.333 14.87 14.87 38.85 2.10
642 644 8.001881 ACGACTGATTGTATCATAGAAGTTCT 57.998 34.615 10.87 10.87 38.85 3.01
643 645 8.635877 AACGACTGATTGTATCATAGAAGTTC 57.364 34.615 0.00 0.00 38.85 3.01
655 657 8.981647 GGTCTAAAACTTAAACGACTGATTGTA 58.018 33.333 0.00 0.00 0.00 2.41
656 658 7.713942 AGGTCTAAAACTTAAACGACTGATTGT 59.286 33.333 0.00 0.00 0.00 2.71
657 659 8.084590 AGGTCTAAAACTTAAACGACTGATTG 57.915 34.615 0.00 0.00 0.00 2.67
658 660 9.420551 CTAGGTCTAAAACTTAAACGACTGATT 57.579 33.333 0.00 0.00 0.00 2.57
659 661 8.583296 ACTAGGTCTAAAACTTAAACGACTGAT 58.417 33.333 0.00 0.00 0.00 2.90
660 662 7.945134 ACTAGGTCTAAAACTTAAACGACTGA 58.055 34.615 0.00 0.00 0.00 3.41
661 663 8.081025 AGACTAGGTCTAAAACTTAAACGACTG 58.919 37.037 0.00 0.00 41.51 3.51
662 664 8.175925 AGACTAGGTCTAAAACTTAAACGACT 57.824 34.615 0.00 0.00 41.51 4.18
663 665 8.697960 CAAGACTAGGTCTAAAACTTAAACGAC 58.302 37.037 0.41 0.00 42.59 4.34
664 666 8.416329 ACAAGACTAGGTCTAAAACTTAAACGA 58.584 33.333 0.41 0.00 42.59 3.85
665 667 8.585189 ACAAGACTAGGTCTAAAACTTAAACG 57.415 34.615 0.41 0.00 42.59 3.60
695 697 9.679661 TGCCACTTGATAGATAGTTCAAATTTA 57.320 29.630 0.00 0.00 31.85 1.40
696 698 8.579850 TGCCACTTGATAGATAGTTCAAATTT 57.420 30.769 0.00 0.00 31.85 1.82
697 699 8.627403 CATGCCACTTGATAGATAGTTCAAATT 58.373 33.333 0.00 0.00 31.85 1.82
698 700 7.255381 GCATGCCACTTGATAGATAGTTCAAAT 60.255 37.037 6.36 0.00 31.85 2.32
699 701 6.038603 GCATGCCACTTGATAGATAGTTCAAA 59.961 38.462 6.36 0.00 31.85 2.69
700 702 5.528690 GCATGCCACTTGATAGATAGTTCAA 59.471 40.000 6.36 0.00 0.00 2.69
701 703 5.059161 GCATGCCACTTGATAGATAGTTCA 58.941 41.667 6.36 0.00 0.00 3.18
702 704 5.303971 AGCATGCCACTTGATAGATAGTTC 58.696 41.667 15.66 0.00 0.00 3.01
703 705 5.301835 AGCATGCCACTTGATAGATAGTT 57.698 39.130 15.66 0.00 0.00 2.24
704 706 4.970860 AGCATGCCACTTGATAGATAGT 57.029 40.909 15.66 0.00 0.00 2.12
705 707 6.313164 CACATAGCATGCCACTTGATAGATAG 59.687 42.308 15.66 0.00 0.00 2.08
706 708 6.168389 CACATAGCATGCCACTTGATAGATA 58.832 40.000 15.66 0.00 0.00 1.98
707 709 5.001874 CACATAGCATGCCACTTGATAGAT 58.998 41.667 15.66 0.00 0.00 1.98
708 710 4.383173 CACATAGCATGCCACTTGATAGA 58.617 43.478 15.66 0.00 0.00 1.98
709 711 3.058432 GCACATAGCATGCCACTTGATAG 60.058 47.826 15.66 4.63 44.79 2.08
710 712 2.880268 GCACATAGCATGCCACTTGATA 59.120 45.455 15.66 0.00 44.79 2.15
711 713 1.679680 GCACATAGCATGCCACTTGAT 59.320 47.619 15.66 0.00 44.79 2.57
712 714 1.097232 GCACATAGCATGCCACTTGA 58.903 50.000 15.66 0.00 44.79 3.02
713 715 0.248336 CGCACATAGCATGCCACTTG 60.248 55.000 15.66 9.51 46.13 3.16
714 716 0.392863 TCGCACATAGCATGCCACTT 60.393 50.000 15.66 0.00 46.13 3.16
715 717 0.392863 TTCGCACATAGCATGCCACT 60.393 50.000 15.66 0.00 46.13 4.00
716 718 0.451383 TTTCGCACATAGCATGCCAC 59.549 50.000 15.66 0.00 46.13 5.01
717 719 0.451383 GTTTCGCACATAGCATGCCA 59.549 50.000 15.66 0.00 46.13 4.92
718 720 0.734889 AGTTTCGCACATAGCATGCC 59.265 50.000 15.66 0.00 46.13 4.40
719 721 3.885484 ATAGTTTCGCACATAGCATGC 57.115 42.857 10.51 10.51 46.13 4.06
720 722 7.800767 AGATAAATAGTTTCGCACATAGCATG 58.199 34.615 0.00 0.00 46.13 4.06
721 723 7.969536 AGATAAATAGTTTCGCACATAGCAT 57.030 32.000 0.00 0.00 46.13 3.79
722 724 7.116376 GCTAGATAAATAGTTTCGCACATAGCA 59.884 37.037 0.00 0.00 46.13 3.49
723 725 7.116376 TGCTAGATAAATAGTTTCGCACATAGC 59.884 37.037 0.00 0.00 40.87 2.97
724 726 8.520835 TGCTAGATAAATAGTTTCGCACATAG 57.479 34.615 0.00 0.00 0.00 2.23
725 727 8.141909 ACTGCTAGATAAATAGTTTCGCACATA 58.858 33.333 0.00 0.00 0.00 2.29
726 728 6.986817 ACTGCTAGATAAATAGTTTCGCACAT 59.013 34.615 0.00 0.00 0.00 3.21
727 729 6.338146 ACTGCTAGATAAATAGTTTCGCACA 58.662 36.000 0.00 0.00 0.00 4.57
728 730 6.830114 ACTGCTAGATAAATAGTTTCGCAC 57.170 37.500 0.00 0.00 0.00 5.34
729 731 7.843490 AAACTGCTAGATAAATAGTTTCGCA 57.157 32.000 0.00 0.00 37.06 5.10
747 749 8.924691 TCATCAAATACAAGCAAATTAAACTGC 58.075 29.630 4.39 4.39 38.91 4.40
758 760 9.448438 ACAAGTATAGTTCATCAAATACAAGCA 57.552 29.630 0.00 0.00 0.00 3.91
759 761 9.708222 CACAAGTATAGTTCATCAAATACAAGC 57.292 33.333 0.00 0.00 0.00 4.01
761 763 9.952030 TCCACAAGTATAGTTCATCAAATACAA 57.048 29.630 0.00 0.00 0.00 2.41
762 764 9.952030 TTCCACAAGTATAGTTCATCAAATACA 57.048 29.630 0.00 0.00 0.00 2.29
766 768 9.431887 GTAGTTCCACAAGTATAGTTCATCAAA 57.568 33.333 0.00 0.00 0.00 2.69
767 769 8.812972 AGTAGTTCCACAAGTATAGTTCATCAA 58.187 33.333 0.00 0.00 0.00 2.57
768 770 8.251026 CAGTAGTTCCACAAGTATAGTTCATCA 58.749 37.037 0.00 0.00 0.00 3.07
769 771 8.251721 ACAGTAGTTCCACAAGTATAGTTCATC 58.748 37.037 0.00 0.00 0.00 2.92
770 772 8.035394 CACAGTAGTTCCACAAGTATAGTTCAT 58.965 37.037 0.00 0.00 0.00 2.57
771 773 7.231925 TCACAGTAGTTCCACAAGTATAGTTCA 59.768 37.037 0.00 0.00 0.00 3.18
772 774 7.600065 TCACAGTAGTTCCACAAGTATAGTTC 58.400 38.462 0.00 0.00 0.00 3.01
773 775 7.534723 TCACAGTAGTTCCACAAGTATAGTT 57.465 36.000 0.00 0.00 0.00 2.24
774 776 7.178628 ACATCACAGTAGTTCCACAAGTATAGT 59.821 37.037 0.00 0.00 0.00 2.12
775 777 7.548097 ACATCACAGTAGTTCCACAAGTATAG 58.452 38.462 0.00 0.00 0.00 1.31
776 778 7.476540 ACATCACAGTAGTTCCACAAGTATA 57.523 36.000 0.00 0.00 0.00 1.47
777 779 6.360370 ACATCACAGTAGTTCCACAAGTAT 57.640 37.500 0.00 0.00 0.00 2.12
778 780 5.801531 ACATCACAGTAGTTCCACAAGTA 57.198 39.130 0.00 0.00 0.00 2.24
779 781 4.689612 ACATCACAGTAGTTCCACAAGT 57.310 40.909 0.00 0.00 0.00 3.16
780 782 7.672983 ATAAACATCACAGTAGTTCCACAAG 57.327 36.000 0.00 0.00 0.00 3.16
781 783 7.500892 ACAATAAACATCACAGTAGTTCCACAA 59.499 33.333 0.00 0.00 0.00 3.33
782 784 6.995686 ACAATAAACATCACAGTAGTTCCACA 59.004 34.615 0.00 0.00 0.00 4.17
783 785 7.298122 CACAATAAACATCACAGTAGTTCCAC 58.702 38.462 0.00 0.00 0.00 4.02
784 786 6.072728 GCACAATAAACATCACAGTAGTTCCA 60.073 38.462 0.00 0.00 0.00 3.53
785 787 6.314784 GCACAATAAACATCACAGTAGTTCC 58.685 40.000 0.00 0.00 0.00 3.62
786 788 6.015504 CGCACAATAAACATCACAGTAGTTC 58.984 40.000 0.00 0.00 0.00 3.01
787 789 5.699001 TCGCACAATAAACATCACAGTAGTT 59.301 36.000 0.00 0.00 0.00 2.24
788 790 5.234752 TCGCACAATAAACATCACAGTAGT 58.765 37.500 0.00 0.00 0.00 2.73
789 791 5.778161 TCGCACAATAAACATCACAGTAG 57.222 39.130 0.00 0.00 0.00 2.57
790 792 5.699001 AGTTCGCACAATAAACATCACAGTA 59.301 36.000 0.00 0.00 0.00 2.74
791 793 4.515191 AGTTCGCACAATAAACATCACAGT 59.485 37.500 0.00 0.00 0.00 3.55
792 794 5.034554 AGTTCGCACAATAAACATCACAG 57.965 39.130 0.00 0.00 0.00 3.66
793 795 6.546972 TTAGTTCGCACAATAAACATCACA 57.453 33.333 0.00 0.00 0.00 3.58
794 796 7.537306 ACATTTAGTTCGCACAATAAACATCAC 59.463 33.333 0.00 0.00 0.00 3.06
795 797 7.589395 ACATTTAGTTCGCACAATAAACATCA 58.411 30.769 0.00 0.00 0.00 3.07
796 798 8.447787 AACATTTAGTTCGCACAATAAACATC 57.552 30.769 0.00 0.00 34.74 3.06
797 799 8.698854 CAAACATTTAGTTCGCACAATAAACAT 58.301 29.630 0.00 0.00 40.26 2.71
798 800 7.915923 TCAAACATTTAGTTCGCACAATAAACA 59.084 29.630 0.00 0.00 40.26 2.83
799 801 8.276060 TCAAACATTTAGTTCGCACAATAAAC 57.724 30.769 0.00 0.00 40.26 2.01
800 802 8.858003 TTCAAACATTTAGTTCGCACAATAAA 57.142 26.923 0.00 0.00 40.26 1.40
801 803 8.858003 TTTCAAACATTTAGTTCGCACAATAA 57.142 26.923 0.00 0.00 40.26 1.40
802 804 9.123709 GATTTCAAACATTTAGTTCGCACAATA 57.876 29.630 0.00 0.00 40.26 1.90
803 805 7.148983 CGATTTCAAACATTTAGTTCGCACAAT 60.149 33.333 0.00 0.00 40.26 2.71
804 806 6.141527 CGATTTCAAACATTTAGTTCGCACAA 59.858 34.615 0.00 0.00 40.26 3.33
805 807 5.623264 CGATTTCAAACATTTAGTTCGCACA 59.377 36.000 0.00 0.00 40.26 4.57
806 808 5.849081 TCGATTTCAAACATTTAGTTCGCAC 59.151 36.000 0.00 0.00 40.26 5.34
807 809 5.991568 TCGATTTCAAACATTTAGTTCGCA 58.008 33.333 0.00 0.00 40.26 5.10
808 810 6.904954 TTCGATTTCAAACATTTAGTTCGC 57.095 33.333 0.00 0.00 40.26 4.70
809 811 9.210426 CCTATTCGATTTCAAACATTTAGTTCG 57.790 33.333 0.00 0.00 40.26 3.95
816 818 9.793252 CAGATTTCCTATTCGATTTCAAACATT 57.207 29.630 0.00 0.00 0.00 2.71
817 819 8.408601 CCAGATTTCCTATTCGATTTCAAACAT 58.591 33.333 0.00 0.00 0.00 2.71
818 820 7.393234 ACCAGATTTCCTATTCGATTTCAAACA 59.607 33.333 0.00 0.00 0.00 2.83
819 821 7.698130 CACCAGATTTCCTATTCGATTTCAAAC 59.302 37.037 0.00 0.00 0.00 2.93
820 822 7.609918 TCACCAGATTTCCTATTCGATTTCAAA 59.390 33.333 0.00 0.00 0.00 2.69
821 823 7.109501 TCACCAGATTTCCTATTCGATTTCAA 58.890 34.615 0.00 0.00 0.00 2.69
822 824 6.649155 TCACCAGATTTCCTATTCGATTTCA 58.351 36.000 0.00 0.00 0.00 2.69
823 825 7.281100 ACTTCACCAGATTTCCTATTCGATTTC 59.719 37.037 0.00 0.00 0.00 2.17
824 826 7.112779 ACTTCACCAGATTTCCTATTCGATTT 58.887 34.615 0.00 0.00 0.00 2.17
825 827 6.653989 ACTTCACCAGATTTCCTATTCGATT 58.346 36.000 0.00 0.00 0.00 3.34
826 828 6.240549 ACTTCACCAGATTTCCTATTCGAT 57.759 37.500 0.00 0.00 0.00 3.59
827 829 5.677319 ACTTCACCAGATTTCCTATTCGA 57.323 39.130 0.00 0.00 0.00 3.71
828 830 6.743575 AAACTTCACCAGATTTCCTATTCG 57.256 37.500 0.00 0.00 0.00 3.34
829 831 7.201617 CCGTAAACTTCACCAGATTTCCTATTC 60.202 40.741 0.00 0.00 0.00 1.75
830 832 6.598064 CCGTAAACTTCACCAGATTTCCTATT 59.402 38.462 0.00 0.00 0.00 1.73
831 833 6.113411 CCGTAAACTTCACCAGATTTCCTAT 58.887 40.000 0.00 0.00 0.00 2.57
832 834 5.484715 CCGTAAACTTCACCAGATTTCCTA 58.515 41.667 0.00 0.00 0.00 2.94
833 835 4.324267 CCGTAAACTTCACCAGATTTCCT 58.676 43.478 0.00 0.00 0.00 3.36
834 836 3.439129 CCCGTAAACTTCACCAGATTTCC 59.561 47.826 0.00 0.00 0.00 3.13
835 837 4.320870 TCCCGTAAACTTCACCAGATTTC 58.679 43.478 0.00 0.00 0.00 2.17
836 838 4.360951 TCCCGTAAACTTCACCAGATTT 57.639 40.909 0.00 0.00 0.00 2.17
837 839 4.225267 AGATCCCGTAAACTTCACCAGATT 59.775 41.667 0.00 0.00 0.00 2.40
838 840 3.775316 AGATCCCGTAAACTTCACCAGAT 59.225 43.478 0.00 0.00 0.00 2.90
839 841 3.170717 AGATCCCGTAAACTTCACCAGA 58.829 45.455 0.00 0.00 0.00 3.86
840 842 3.611766 AGATCCCGTAAACTTCACCAG 57.388 47.619 0.00 0.00 0.00 4.00
841 843 5.424252 AGAATAGATCCCGTAAACTTCACCA 59.576 40.000 0.00 0.00 0.00 4.17
842 844 5.915175 AGAATAGATCCCGTAAACTTCACC 58.085 41.667 0.00 0.00 0.00 4.02
843 845 7.537991 CGATAGAATAGATCCCGTAAACTTCAC 59.462 40.741 0.00 0.00 39.76 3.18
844 846 7.446319 TCGATAGAATAGATCCCGTAAACTTCA 59.554 37.037 0.00 0.00 46.15 3.02
845 847 7.814642 TCGATAGAATAGATCCCGTAAACTTC 58.185 38.462 0.00 0.00 46.15 3.01
846 848 7.756395 TCGATAGAATAGATCCCGTAAACTT 57.244 36.000 0.00 0.00 46.15 2.66
864 866 1.068885 GGACAGCGGACAGATCGATAG 60.069 57.143 0.00 0.00 0.00 2.08
865 867 0.952280 GGACAGCGGACAGATCGATA 59.048 55.000 0.00 0.00 0.00 2.92
866 868 1.736586 GGACAGCGGACAGATCGAT 59.263 57.895 0.00 0.00 0.00 3.59
867 869 2.415608 GGGACAGCGGACAGATCGA 61.416 63.158 0.00 0.00 0.00 3.59
868 870 2.105128 GGGACAGCGGACAGATCG 59.895 66.667 0.00 0.00 0.00 3.69
869 871 2.105128 CGGGACAGCGGACAGATC 59.895 66.667 0.00 0.00 0.00 2.75
870 872 4.148825 GCGGGACAGCGGACAGAT 62.149 66.667 0.00 0.00 0.00 2.90
872 874 4.680237 TTGCGGGACAGCGGACAG 62.680 66.667 0.00 0.00 40.67 3.51
873 875 3.545124 ATTTGCGGGACAGCGGACA 62.545 57.895 0.00 0.00 40.67 4.02
874 876 1.862602 AAATTTGCGGGACAGCGGAC 61.863 55.000 0.00 0.00 40.67 4.79
875 877 1.175983 AAAATTTGCGGGACAGCGGA 61.176 50.000 0.00 0.00 40.67 5.54
876 878 1.008361 CAAAATTTGCGGGACAGCGG 61.008 55.000 0.00 0.00 40.67 5.52
877 879 0.318614 ACAAAATTTGCGGGACAGCG 60.319 50.000 5.52 0.00 40.67 5.18
878 880 1.864565 AACAAAATTTGCGGGACAGC 58.135 45.000 5.52 0.00 37.71 4.40
879 881 4.208253 GTGTAAACAAAATTTGCGGGACAG 59.792 41.667 5.52 0.00 0.00 3.51
880 882 4.113354 GTGTAAACAAAATTTGCGGGACA 58.887 39.130 5.52 2.85 0.00 4.02
881 883 4.364860 AGTGTAAACAAAATTTGCGGGAC 58.635 39.130 5.52 0.29 0.00 4.46
882 884 4.657436 AGTGTAAACAAAATTTGCGGGA 57.343 36.364 5.52 0.00 0.00 5.14
883 885 6.528774 GGTATAGTGTAAACAAAATTTGCGGG 59.471 38.462 5.52 0.00 0.00 6.13
884 886 6.249682 CGGTATAGTGTAAACAAAATTTGCGG 59.750 38.462 5.52 0.00 0.00 5.69
885 887 6.249682 CCGGTATAGTGTAAACAAAATTTGCG 59.750 38.462 5.52 0.00 0.00 4.85
886 888 7.306953 TCCGGTATAGTGTAAACAAAATTTGC 58.693 34.615 5.52 0.00 0.00 3.68
887 889 9.284594 CATCCGGTATAGTGTAAACAAAATTTG 57.715 33.333 0.00 3.89 0.00 2.32
888 890 9.016438 ACATCCGGTATAGTGTAAACAAAATTT 57.984 29.630 0.00 0.00 0.00 1.82
889 891 8.455682 CACATCCGGTATAGTGTAAACAAAATT 58.544 33.333 0.00 0.00 0.00 1.82
890 892 7.414762 GCACATCCGGTATAGTGTAAACAAAAT 60.415 37.037 0.00 0.00 34.59 1.82
891 893 6.128227 GCACATCCGGTATAGTGTAAACAAAA 60.128 38.462 0.00 0.00 34.59 2.44
892 894 5.352016 GCACATCCGGTATAGTGTAAACAAA 59.648 40.000 0.00 0.00 34.59 2.83
893 895 4.871557 GCACATCCGGTATAGTGTAAACAA 59.128 41.667 0.00 0.00 34.59 2.83
894 896 4.160814 AGCACATCCGGTATAGTGTAAACA 59.839 41.667 0.00 0.00 34.59 2.83
895 897 4.690122 AGCACATCCGGTATAGTGTAAAC 58.310 43.478 0.00 0.00 34.59 2.01
896 898 5.829391 TCTAGCACATCCGGTATAGTGTAAA 59.171 40.000 0.00 0.00 34.59 2.01
897 899 5.379187 TCTAGCACATCCGGTATAGTGTAA 58.621 41.667 0.00 0.00 34.59 2.41
898 900 4.976864 TCTAGCACATCCGGTATAGTGTA 58.023 43.478 0.00 2.03 34.59 2.90
899 901 3.821600 CTCTAGCACATCCGGTATAGTGT 59.178 47.826 0.00 0.00 34.59 3.55
900 902 4.072839 TCTCTAGCACATCCGGTATAGTG 58.927 47.826 0.00 7.62 35.19 2.74
901 903 4.368565 TCTCTAGCACATCCGGTATAGT 57.631 45.455 0.00 0.00 0.00 2.12
902 904 4.439426 GCATCTCTAGCACATCCGGTATAG 60.439 50.000 0.00 0.00 0.00 1.31
903 905 3.444034 GCATCTCTAGCACATCCGGTATA 59.556 47.826 0.00 0.00 0.00 1.47
904 906 2.232452 GCATCTCTAGCACATCCGGTAT 59.768 50.000 0.00 0.00 0.00 2.73
905 907 1.613925 GCATCTCTAGCACATCCGGTA 59.386 52.381 0.00 0.00 0.00 4.02
906 908 0.390860 GCATCTCTAGCACATCCGGT 59.609 55.000 0.00 0.00 0.00 5.28
907 909 0.678395 AGCATCTCTAGCACATCCGG 59.322 55.000 0.00 0.00 0.00 5.14
908 910 2.063156 GAGCATCTCTAGCACATCCG 57.937 55.000 0.00 0.00 0.00 4.18
921 923 5.729510 ACAGAAGAAACCTCTTAGAGCATC 58.270 41.667 3.26 1.80 42.19 3.91
922 924 5.753721 ACAGAAGAAACCTCTTAGAGCAT 57.246 39.130 3.26 0.00 42.19 3.79
923 925 6.665992 TTACAGAAGAAACCTCTTAGAGCA 57.334 37.500 3.26 0.00 42.19 4.26
924 926 7.604545 ACATTTACAGAAGAAACCTCTTAGAGC 59.395 37.037 3.26 0.00 42.19 4.09
925 927 8.930760 CACATTTACAGAAGAAACCTCTTAGAG 58.069 37.037 1.56 1.56 42.19 2.43
926 928 7.387948 GCACATTTACAGAAGAAACCTCTTAGA 59.612 37.037 0.00 0.00 42.19 2.10
927 929 7.361286 GGCACATTTACAGAAGAAACCTCTTAG 60.361 40.741 0.00 0.00 42.19 2.18
928 930 6.430000 GGCACATTTACAGAAGAAACCTCTTA 59.570 38.462 0.00 0.00 42.19 2.10
931 933 4.518970 TGGCACATTTACAGAAGAAACCTC 59.481 41.667 0.00 0.00 0.00 3.85
937 939 3.325870 CTCGTGGCACATTTACAGAAGA 58.674 45.455 19.09 1.46 44.52 2.87
955 957 2.202932 AGCTAATGCGTGGCCTCG 60.203 61.111 22.48 22.48 45.42 4.63
984 986 2.029470 GGCCATTGGATGTGAAACGAAA 60.029 45.455 6.95 0.00 42.39 3.46
1035 1037 2.034687 GCCAGGCCAAGCAAGAGA 59.965 61.111 5.01 0.00 0.00 3.10
1051 1053 1.409381 CCCCAAATTCAGAGGAGAGGC 60.409 57.143 0.00 0.00 0.00 4.70
1053 1055 2.419297 CGTCCCCAAATTCAGAGGAGAG 60.419 54.545 0.00 0.00 0.00 3.20
1055 1057 1.407437 CCGTCCCCAAATTCAGAGGAG 60.407 57.143 0.00 0.00 0.00 3.69
1056 1058 0.618458 CCGTCCCCAAATTCAGAGGA 59.382 55.000 0.00 0.00 0.00 3.71
1057 1059 0.394352 CCCGTCCCCAAATTCAGAGG 60.394 60.000 0.00 0.00 0.00 3.69
1151 1156 1.687612 CTGCACCAGTTCAGGGGAT 59.312 57.895 0.00 0.00 32.15 3.85
1194 1199 0.462759 GAAGAAGGCGCATGCTAGGT 60.463 55.000 17.13 0.00 42.25 3.08
1206 1211 0.440371 GCGAGTTTGAGCGAAGAAGG 59.560 55.000 0.00 0.00 0.00 3.46
1228 1233 3.148279 GGAGGCGACGACCAGGAT 61.148 66.667 0.00 0.00 0.00 3.24
1313 1318 2.224079 AGCACTACACGCAAACAGATTG 59.776 45.455 0.00 0.00 42.21 2.67
1367 1372 3.319137 TCAGAATCTTCTTGGGTCGTG 57.681 47.619 0.00 0.00 34.74 4.35
1430 1435 9.458374 AAACAAACAAATAAACAATACGGAGAG 57.542 29.630 0.00 0.00 0.00 3.20
1650 1760 3.243068 GGAAGCTGAGAAAACGCAAAGAA 60.243 43.478 0.00 0.00 0.00 2.52
1652 1762 2.033299 TGGAAGCTGAGAAAACGCAAAG 59.967 45.455 0.00 0.00 0.00 2.77
1666 1778 4.636206 CGCTTAATTTCTTACCTGGAAGCT 59.364 41.667 0.00 0.00 36.71 3.74
1732 1847 3.058432 GCTGTACGTGTTGAGTCTGTAGA 60.058 47.826 0.00 0.00 0.00 2.59
1733 1848 3.235195 GCTGTACGTGTTGAGTCTGTAG 58.765 50.000 0.00 0.00 0.00 2.74
1734 1849 2.619646 TGCTGTACGTGTTGAGTCTGTA 59.380 45.455 0.00 0.00 0.00 2.74
1738 1853 1.521423 GTGTGCTGTACGTGTTGAGTC 59.479 52.381 0.00 0.00 0.00 3.36
1835 1950 3.589735 TGGAGGGAACTAATTAAGTGGCA 59.410 43.478 0.00 0.00 44.43 4.92
1836 1951 4.200092 CTGGAGGGAACTAATTAAGTGGC 58.800 47.826 0.00 0.00 44.43 5.01
1910 2061 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
1912 2063 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
1914 2065 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
1916 2067 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
1917 2068 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
1918 2069 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
1919 2070 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
1920 2071 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
1921 2072 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
1923 2074 1.152510 GACACACACACACACACACA 58.847 50.000 0.00 0.00 0.00 3.72
1925 2076 0.675208 GGGACACACACACACACACA 60.675 55.000 0.00 0.00 0.00 3.72
1926 2077 0.675208 TGGGACACACACACACACAC 60.675 55.000 0.00 0.00 0.00 3.82
1927 2078 1.679898 TGGGACACACACACACACA 59.320 52.632 0.00 0.00 0.00 3.72
1928 2079 4.627788 TGGGACACACACACACAC 57.372 55.556 0.00 0.00 0.00 3.82
1932 2083 9.734195 TGGATACATATCATGGGACACACACAC 62.734 44.444 0.00 0.00 43.57 3.82
1933 2084 7.825397 TGGATACATATCATGGGACACACACA 61.825 42.308 0.00 0.00 43.57 3.72
1934 2085 5.454613 TGGATACATATCATGGGACACACAC 60.455 44.000 0.00 0.00 43.57 3.82
1935 2086 4.657969 TGGATACATATCATGGGACACACA 59.342 41.667 0.00 0.00 43.57 3.72
1936 2087 5.227569 TGGATACATATCATGGGACACAC 57.772 43.478 0.00 0.00 43.57 3.82
1995 2318 1.069049 ACAACACAAAGGCATCCTTGC 59.931 47.619 0.00 0.00 43.92 4.01
2318 2641 0.105964 CGTGGAACTGAACCCTGTCA 59.894 55.000 0.00 0.00 31.75 3.58
2344 2667 2.002505 ATGTCACGCCTATCCTAGCT 57.997 50.000 0.00 0.00 0.00 3.32
2456 2780 7.974675 TGTTAATTATGAGTTGTAAGCTGAGC 58.025 34.615 0.00 0.00 0.00 4.26
2464 2788 9.733556 AGGACACATTGTTAATTATGAGTTGTA 57.266 29.630 6.73 0.00 0.00 2.41
2558 2882 1.463553 GGGGACACAACAGGGCAAAG 61.464 60.000 0.00 0.00 0.00 2.77
2559 2883 1.456705 GGGGACACAACAGGGCAAA 60.457 57.895 0.00 0.00 0.00 3.68
2572 2896 1.620323 AGAAAATTGCAGCAAGGGGAC 59.380 47.619 14.47 4.26 0.00 4.46
2587 2911 5.496556 TCTGACTTGAGAAACCACAGAAAA 58.503 37.500 0.00 0.00 31.51 2.29
2632 2956 2.734755 TAAGTCCCATCATTGCCTGG 57.265 50.000 0.00 0.00 0.00 4.45
2638 2962 6.213600 AGGCGAAGTATATAAGTCCCATCATT 59.786 38.462 0.00 0.00 0.00 2.57
2647 2971 5.470047 CCAGGAAGGCGAAGTATATAAGT 57.530 43.478 0.00 0.00 0.00 2.24
2677 3001 0.251474 TCCTCGAACCCTCTTTCGGA 60.251 55.000 5.50 0.00 46.77 4.55
2689 3013 1.404181 CCTTCATTCACGCTCCTCGAA 60.404 52.381 0.00 0.00 41.67 3.71
2692 3016 1.478510 TCTCCTTCATTCACGCTCCTC 59.521 52.381 0.00 0.00 0.00 3.71
2780 3104 6.497259 TCAGAGTAGACTCACCAAAATAAGGT 59.503 38.462 12.09 0.00 45.21 3.50
2917 3241 4.829064 TTGTACAACAACTCATCTTGCC 57.171 40.909 3.59 0.00 32.34 4.52
3014 3339 8.253113 CCAAGTAGTAGTACCGAAAATTAAGGA 58.747 37.037 4.02 0.00 0.00 3.36
3027 3352 3.118847 GGCAGGAACCCAAGTAGTAGTAC 60.119 52.174 0.00 0.00 0.00 2.73
3137 3465 7.053498 TGTAATGTGCATTTTGGATCTAGCTA 58.947 34.615 2.56 0.00 32.50 3.32
3191 3522 6.839124 TTCCTGAATATCATGTGCACTTTT 57.161 33.333 19.41 2.66 0.00 2.27
3205 3536 8.593945 AAATTAAGATGCCAGTTTCCTGAATA 57.406 30.769 0.00 0.00 41.50 1.75
3242 3573 5.922544 GCTGCATCCCATGTAAATTATTGAC 59.077 40.000 0.00 0.00 0.00 3.18
3252 3583 1.608696 TGCTGCTGCATCCCATGTA 59.391 52.632 14.93 0.00 45.31 2.29
3273 3604 0.960364 GCACCGCTCATCTTCCCAAA 60.960 55.000 0.00 0.00 0.00 3.28
3324 3655 3.194968 ACCTATACCTGGACAAACTCGTG 59.805 47.826 0.00 0.00 0.00 4.35
3368 3699 1.760875 ACCACCACCTGTGTCGACT 60.761 57.895 17.92 0.00 43.85 4.18
3369 3700 1.594293 CACCACCACCTGTGTCGAC 60.594 63.158 9.11 9.11 43.85 4.20
3388 3719 4.121669 GCTCGAGCTGTCAGCCGA 62.122 66.667 29.88 26.25 43.77 5.54
3442 3773 4.093998 CCAAGACAAGATGAAACTGGATCG 59.906 45.833 0.00 0.00 0.00 3.69
3456 3790 1.334869 GGCAACAGTGACCAAGACAAG 59.665 52.381 0.00 0.00 0.00 3.16
3476 3810 2.610694 GCCGCCACCATCATCGATG 61.611 63.158 19.61 19.61 39.52 3.84
3477 3811 2.281070 GCCGCCACCATCATCGAT 60.281 61.111 0.00 0.00 0.00 3.59
3481 3815 4.511246 CCTGGCCGCCACCATCAT 62.511 66.667 8.43 0.00 39.54 2.45
3591 3937 3.362797 CACCACCAGCAGCAGCAG 61.363 66.667 3.17 0.00 45.49 4.24
3592 3938 4.960866 CCACCACCAGCAGCAGCA 62.961 66.667 3.17 0.00 45.49 4.41
3593 3939 4.962836 ACCACCACCAGCAGCAGC 62.963 66.667 0.00 0.00 42.56 5.25
3594 3940 2.981909 CACCACCACCAGCAGCAG 60.982 66.667 0.00 0.00 0.00 4.24
3595 3941 4.584518 CCACCACCACCAGCAGCA 62.585 66.667 0.00 0.00 0.00 4.41
3596 3942 4.586235 ACCACCACCACCAGCAGC 62.586 66.667 0.00 0.00 0.00 5.25
3597 3943 2.195567 CAACCACCACCACCAGCAG 61.196 63.158 0.00 0.00 0.00 4.24
3598 3944 2.123939 CAACCACCACCACCAGCA 60.124 61.111 0.00 0.00 0.00 4.41
3599 3945 2.123897 ACAACCACCACCACCAGC 60.124 61.111 0.00 0.00 0.00 4.85
3600 3946 1.827789 CCACAACCACCACCACCAG 60.828 63.158 0.00 0.00 0.00 4.00
3601 3947 2.277072 CCACAACCACCACCACCA 59.723 61.111 0.00 0.00 0.00 4.17
3602 3948 3.223589 GCCACAACCACCACCACC 61.224 66.667 0.00 0.00 0.00 4.61
3603 3949 2.123897 AGCCACAACCACCACCAC 60.124 61.111 0.00 0.00 0.00 4.16
3604 3950 1.932156 AAGAGCCACAACCACCACCA 61.932 55.000 0.00 0.00 0.00 4.17
3605 3951 1.152756 AAGAGCCACAACCACCACC 60.153 57.895 0.00 0.00 0.00 4.61
3606 3952 0.751643 ACAAGAGCCACAACCACCAC 60.752 55.000 0.00 0.00 0.00 4.16
3607 3953 0.033601 AACAAGAGCCACAACCACCA 60.034 50.000 0.00 0.00 0.00 4.17
3608 3954 0.385390 CAACAAGAGCCACAACCACC 59.615 55.000 0.00 0.00 0.00 4.61
3609 3955 0.385390 CCAACAAGAGCCACAACCAC 59.615 55.000 0.00 0.00 0.00 4.16
3610 3956 0.033601 ACCAACAAGAGCCACAACCA 60.034 50.000 0.00 0.00 0.00 3.67
3611 3957 0.385390 CACCAACAAGAGCCACAACC 59.615 55.000 0.00 0.00 0.00 3.77
3657 4003 2.675423 CCACTGCCAGCATGCTGT 60.675 61.111 38.22 22.38 43.15 4.40
3711 4057 2.357881 CACCGCAAGCTGCTCTCA 60.358 61.111 1.00 0.00 42.25 3.27


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.