Multiple sequence alignment - TraesCS7B01G359600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G359600 chr7B 100.000 2822 0 0 1 2822 621916859 621914038 0.000000e+00 5212
1 TraesCS7B01G359600 chr7B 90.766 1018 88 5 1808 2822 120466857 120467871 0.000000e+00 1354
2 TraesCS7B01G359600 chr1D 90.087 1947 188 5 878 2822 442404183 442402240 0.000000e+00 2521
3 TraesCS7B01G359600 chr6B 86.585 1953 250 8 878 2822 478890191 478888243 0.000000e+00 2145
4 TraesCS7B01G359600 chr6B 92.835 1312 92 2 872 2182 623435366 623436676 0.000000e+00 1901
5 TraesCS7B01G359600 chr6B 89.221 1271 126 7 875 2144 590032485 590031225 0.000000e+00 1578
6 TraesCS7B01G359600 chr6B 94.355 620 29 4 2203 2822 623436882 623437495 0.000000e+00 946
7 TraesCS7B01G359600 chr6B 89.644 618 62 2 2205 2822 590030800 590030185 0.000000e+00 785
8 TraesCS7B01G359600 chr2B 84.962 1955 283 7 873 2822 751298123 751296175 0.000000e+00 1971
9 TraesCS7B01G359600 chr2B 91.525 118 9 1 2126 2242 792980118 792980235 8.090000e-36 161
10 TraesCS7B01G359600 chr2B 85.833 120 13 3 2126 2242 784980658 784980776 1.060000e-24 124
11 TraesCS7B01G359600 chr5B 84.635 1959 283 11 875 2822 281238663 281240614 0.000000e+00 1934
12 TraesCS7B01G359600 chr1B 85.000 1480 219 3 1344 2822 533807916 533809393 0.000000e+00 1500
13 TraesCS7B01G359600 chr6A 84.639 1289 189 9 878 2162 511532058 511533341 0.000000e+00 1275
14 TraesCS7B01G359600 chr2A 84.438 1298 195 7 878 2172 48199152 48200445 0.000000e+00 1271
15 TraesCS7B01G359600 chr7D 91.186 624 54 1 2199 2822 76796618 76797240 0.000000e+00 846
16 TraesCS7B01G359600 chr7D 80.888 518 59 25 1 490 567668808 567668303 3.430000e-99 372
17 TraesCS7B01G359600 chr3D 90.794 630 55 3 2194 2822 593755358 593754731 0.000000e+00 839
18 TraesCS7B01G359600 chr7A 86.590 522 39 20 1 503 654562337 654561828 5.310000e-152 547


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G359600 chr7B 621914038 621916859 2821 True 5212.0 5212 100.0000 1 2822 1 chr7B.!!$R1 2821
1 TraesCS7B01G359600 chr7B 120466857 120467871 1014 False 1354.0 1354 90.7660 1808 2822 1 chr7B.!!$F1 1014
2 TraesCS7B01G359600 chr1D 442402240 442404183 1943 True 2521.0 2521 90.0870 878 2822 1 chr1D.!!$R1 1944
3 TraesCS7B01G359600 chr6B 478888243 478890191 1948 True 2145.0 2145 86.5850 878 2822 1 chr6B.!!$R1 1944
4 TraesCS7B01G359600 chr6B 623435366 623437495 2129 False 1423.5 1901 93.5950 872 2822 2 chr6B.!!$F1 1950
5 TraesCS7B01G359600 chr6B 590030185 590032485 2300 True 1181.5 1578 89.4325 875 2822 2 chr6B.!!$R2 1947
6 TraesCS7B01G359600 chr2B 751296175 751298123 1948 True 1971.0 1971 84.9620 873 2822 1 chr2B.!!$R1 1949
7 TraesCS7B01G359600 chr5B 281238663 281240614 1951 False 1934.0 1934 84.6350 875 2822 1 chr5B.!!$F1 1947
8 TraesCS7B01G359600 chr1B 533807916 533809393 1477 False 1500.0 1500 85.0000 1344 2822 1 chr1B.!!$F1 1478
9 TraesCS7B01G359600 chr6A 511532058 511533341 1283 False 1275.0 1275 84.6390 878 2162 1 chr6A.!!$F1 1284
10 TraesCS7B01G359600 chr2A 48199152 48200445 1293 False 1271.0 1271 84.4380 878 2172 1 chr2A.!!$F1 1294
11 TraesCS7B01G359600 chr7D 76796618 76797240 622 False 846.0 846 91.1860 2199 2822 1 chr7D.!!$F1 623
12 TraesCS7B01G359600 chr7D 567668303 567668808 505 True 372.0 372 80.8880 1 490 1 chr7D.!!$R1 489
13 TraesCS7B01G359600 chr3D 593754731 593755358 627 True 839.0 839 90.7940 2194 2822 1 chr3D.!!$R1 628
14 TraesCS7B01G359600 chr7A 654561828 654562337 509 True 547.0 547 86.5900 1 503 1 chr7A.!!$R1 502

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
748 790 0.031721 GTTCCTCGGATATCGCGGTT 59.968 55.0 6.13 0.0 43.65 4.44 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1971 2018 0.179702 TCACAGCATCATCTCCAGCC 59.82 55.0 0.0 0.0 0.0 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
112 118 0.446222 TACGCGCTTTGCCAGATTTC 59.554 50.000 5.73 0.00 42.08 2.17
133 139 3.958860 CCGGGCTGGGATGGGATC 61.959 72.222 3.77 0.00 0.00 3.36
161 167 2.036475 CGGAGGAGAGAGAGAGAGAGAG 59.964 59.091 0.00 0.00 0.00 3.20
162 168 3.309296 GGAGGAGAGAGAGAGAGAGAGA 58.691 54.545 0.00 0.00 0.00 3.10
163 169 3.070302 GGAGGAGAGAGAGAGAGAGAGAC 59.930 56.522 0.00 0.00 0.00 3.36
164 170 2.695666 AGGAGAGAGAGAGAGAGAGACG 59.304 54.545 0.00 0.00 0.00 4.18
166 172 2.431057 GAGAGAGAGAGAGAGAGACGGT 59.569 54.545 0.00 0.00 0.00 4.83
167 173 2.168521 AGAGAGAGAGAGAGAGACGGTG 59.831 54.545 0.00 0.00 0.00 4.94
182 193 2.032634 GGTGGCGCTCGTGATTTGA 61.033 57.895 7.64 0.00 0.00 2.69
183 194 1.421485 GTGGCGCTCGTGATTTGAG 59.579 57.895 7.64 0.00 36.53 3.02
184 195 1.741401 TGGCGCTCGTGATTTGAGG 60.741 57.895 7.64 0.00 33.99 3.86
185 196 2.464459 GGCGCTCGTGATTTGAGGG 61.464 63.158 7.64 3.02 46.00 4.30
186 197 1.447838 GCGCTCGTGATTTGAGGGA 60.448 57.895 0.00 0.00 46.11 4.20
187 198 1.424493 GCGCTCGTGATTTGAGGGAG 61.424 60.000 0.00 0.00 46.11 4.30
188 199 0.807667 CGCTCGTGATTTGAGGGAGG 60.808 60.000 1.26 0.00 46.11 4.30
189 200 0.462759 GCTCGTGATTTGAGGGAGGG 60.463 60.000 0.00 0.00 33.99 4.30
190 201 1.195115 CTCGTGATTTGAGGGAGGGA 58.805 55.000 0.00 0.00 0.00 4.20
191 202 1.137872 CTCGTGATTTGAGGGAGGGAG 59.862 57.143 0.00 0.00 0.00 4.30
192 203 0.179000 CGTGATTTGAGGGAGGGAGG 59.821 60.000 0.00 0.00 0.00 4.30
193 204 0.548510 GTGATTTGAGGGAGGGAGGG 59.451 60.000 0.00 0.00 0.00 4.30
194 205 0.421495 TGATTTGAGGGAGGGAGGGA 59.579 55.000 0.00 0.00 0.00 4.20
195 206 1.135960 GATTTGAGGGAGGGAGGGAG 58.864 60.000 0.00 0.00 0.00 4.30
196 207 0.990818 ATTTGAGGGAGGGAGGGAGC 60.991 60.000 0.00 0.00 0.00 4.70
307 345 3.996825 GCGGAGGCAAATTACACTG 57.003 52.632 0.00 0.00 39.62 3.66
308 346 0.179163 GCGGAGGCAAATTACACTGC 60.179 55.000 0.00 0.00 39.62 4.40
332 374 4.700213 CGTCAATCAAGGGATAAAGTTGGT 59.300 41.667 0.00 0.00 32.09 3.67
334 376 6.373216 CGTCAATCAAGGGATAAAGTTGGTAA 59.627 38.462 0.00 0.00 32.09 2.85
335 377 7.094549 CGTCAATCAAGGGATAAAGTTGGTAAA 60.095 37.037 0.00 0.00 32.09 2.01
336 378 8.581578 GTCAATCAAGGGATAAAGTTGGTAAAA 58.418 33.333 0.00 0.00 32.09 1.52
337 379 9.148879 TCAATCAAGGGATAAAGTTGGTAAAAA 57.851 29.630 0.00 0.00 32.09 1.94
357 399 5.692613 AAAATTGTTGTGGCCATGATTTG 57.307 34.783 9.72 0.00 0.00 2.32
358 400 4.354893 AATTGTTGTGGCCATGATTTGT 57.645 36.364 9.72 0.00 0.00 2.83
359 401 3.834489 TTGTTGTGGCCATGATTTGTT 57.166 38.095 9.72 0.00 0.00 2.83
360 402 4.944619 TTGTTGTGGCCATGATTTGTTA 57.055 36.364 9.72 0.00 0.00 2.41
361 403 4.250116 TGTTGTGGCCATGATTTGTTAC 57.750 40.909 9.72 0.00 0.00 2.50
362 404 3.638627 TGTTGTGGCCATGATTTGTTACA 59.361 39.130 9.72 0.00 0.00 2.41
363 405 4.236935 GTTGTGGCCATGATTTGTTACAG 58.763 43.478 9.72 0.00 0.00 2.74
364 406 3.760738 TGTGGCCATGATTTGTTACAGA 58.239 40.909 9.72 0.00 0.00 3.41
365 407 4.343231 TGTGGCCATGATTTGTTACAGAT 58.657 39.130 9.72 0.00 0.00 2.90
366 408 4.158209 TGTGGCCATGATTTGTTACAGATG 59.842 41.667 9.72 0.00 0.00 2.90
367 409 3.130869 TGGCCATGATTTGTTACAGATGC 59.869 43.478 0.00 0.00 0.00 3.91
368 410 3.491447 GGCCATGATTTGTTACAGATGCC 60.491 47.826 0.00 0.00 0.00 4.40
369 411 3.130869 GCCATGATTTGTTACAGATGCCA 59.869 43.478 0.00 0.00 0.00 4.92
370 412 4.381825 GCCATGATTTGTTACAGATGCCAA 60.382 41.667 0.00 0.00 0.00 4.52
371 413 5.722263 CCATGATTTGTTACAGATGCCAAA 58.278 37.500 0.00 0.00 0.00 3.28
372 414 6.164876 CCATGATTTGTTACAGATGCCAAAA 58.835 36.000 0.00 0.00 31.30 2.44
373 415 6.649973 CCATGATTTGTTACAGATGCCAAAAA 59.350 34.615 0.00 0.00 31.30 1.94
374 416 7.334921 CCATGATTTGTTACAGATGCCAAAAAT 59.665 33.333 0.00 0.00 31.30 1.82
375 417 8.723311 CATGATTTGTTACAGATGCCAAAAATT 58.277 29.630 0.00 0.00 31.30 1.82
376 418 8.085720 TGATTTGTTACAGATGCCAAAAATTG 57.914 30.769 0.00 0.00 31.30 2.32
377 419 5.921004 TTGTTACAGATGCCAAAAATTGC 57.079 34.783 0.00 0.00 0.00 3.56
378 420 4.314121 TGTTACAGATGCCAAAAATTGCC 58.686 39.130 0.00 0.00 0.00 4.52
379 421 4.202295 TGTTACAGATGCCAAAAATTGCCA 60.202 37.500 0.00 0.00 0.00 4.92
380 422 3.706600 ACAGATGCCAAAAATTGCCAT 57.293 38.095 0.00 0.00 0.00 4.40
381 423 3.340034 ACAGATGCCAAAAATTGCCATG 58.660 40.909 0.00 0.00 0.00 3.66
382 424 2.096819 CAGATGCCAAAAATTGCCATGC 59.903 45.455 0.00 0.00 0.00 4.06
383 425 2.085320 GATGCCAAAAATTGCCATGCA 58.915 42.857 0.00 0.00 36.47 3.96
384 426 1.524848 TGCCAAAAATTGCCATGCAG 58.475 45.000 0.00 0.00 40.61 4.41
385 427 1.071857 TGCCAAAAATTGCCATGCAGA 59.928 42.857 0.00 0.00 40.61 4.26
386 428 2.290387 TGCCAAAAATTGCCATGCAGAT 60.290 40.909 0.00 0.00 40.61 2.90
387 429 3.055312 TGCCAAAAATTGCCATGCAGATA 60.055 39.130 0.00 0.00 40.61 1.98
388 430 4.131596 GCCAAAAATTGCCATGCAGATAT 58.868 39.130 0.00 0.00 40.61 1.63
389 431 4.577283 GCCAAAAATTGCCATGCAGATATT 59.423 37.500 0.00 0.00 40.61 1.28
390 432 5.277634 GCCAAAAATTGCCATGCAGATATTC 60.278 40.000 0.00 0.00 40.61 1.75
391 433 5.818336 CCAAAAATTGCCATGCAGATATTCA 59.182 36.000 0.00 0.00 40.61 2.57
392 434 6.018262 CCAAAAATTGCCATGCAGATATTCAG 60.018 38.462 0.00 0.00 40.61 3.02
393 435 3.936372 ATTGCCATGCAGATATTCAGC 57.064 42.857 0.00 0.00 40.61 4.26
394 436 2.351706 TGCCATGCAGATATTCAGCA 57.648 45.000 0.00 0.00 42.97 4.41
396 438 3.227614 TGCCATGCAGATATTCAGCATT 58.772 40.909 4.84 0.00 45.46 3.56
397 439 3.639561 TGCCATGCAGATATTCAGCATTT 59.360 39.130 4.84 0.00 45.46 2.32
398 440 3.987868 GCCATGCAGATATTCAGCATTTG 59.012 43.478 4.84 2.01 45.46 2.32
399 441 3.987868 CCATGCAGATATTCAGCATTTGC 59.012 43.478 4.84 0.00 45.46 3.68
416 458 6.917533 GCATTTGCTGAATATATTGCCTACT 58.082 36.000 1.78 0.00 38.21 2.57
417 459 6.805271 GCATTTGCTGAATATATTGCCTACTG 59.195 38.462 1.78 0.00 38.21 2.74
418 460 7.308770 GCATTTGCTGAATATATTGCCTACTGA 60.309 37.037 1.78 0.00 38.21 3.41
419 461 8.737175 CATTTGCTGAATATATTGCCTACTGAT 58.263 33.333 1.78 0.00 0.00 2.90
420 462 8.696043 TTTGCTGAATATATTGCCTACTGATT 57.304 30.769 1.78 0.00 0.00 2.57
421 463 7.677454 TGCTGAATATATTGCCTACTGATTG 57.323 36.000 1.78 0.00 0.00 2.67
422 464 6.656270 TGCTGAATATATTGCCTACTGATTGG 59.344 38.462 1.78 0.00 0.00 3.16
423 465 6.094603 GCTGAATATATTGCCTACTGATTGGG 59.905 42.308 1.78 0.00 0.00 4.12
424 466 5.945784 TGAATATATTGCCTACTGATTGGGC 59.054 40.000 1.78 0.00 45.45 5.36
428 470 3.577389 GCCTACTGATTGGGCAGTT 57.423 52.632 2.09 0.00 46.42 3.16
429 471 2.710096 GCCTACTGATTGGGCAGTTA 57.290 50.000 2.09 0.00 46.42 2.24
430 472 3.214696 GCCTACTGATTGGGCAGTTAT 57.785 47.619 2.09 0.00 46.42 1.89
431 473 3.142174 GCCTACTGATTGGGCAGTTATC 58.858 50.000 2.09 0.00 46.42 1.75
432 474 3.433598 GCCTACTGATTGGGCAGTTATCA 60.434 47.826 2.09 0.00 46.42 2.15
433 475 4.384056 CCTACTGATTGGGCAGTTATCAG 58.616 47.826 12.83 12.83 46.42 2.90
434 476 4.101585 CCTACTGATTGGGCAGTTATCAGA 59.898 45.833 18.35 6.75 46.42 3.27
435 477 4.785346 ACTGATTGGGCAGTTATCAGAT 57.215 40.909 18.35 0.00 46.42 2.90
436 478 4.712476 ACTGATTGGGCAGTTATCAGATC 58.288 43.478 18.35 0.00 46.42 2.75
437 479 4.411540 ACTGATTGGGCAGTTATCAGATCT 59.588 41.667 18.35 0.00 46.42 2.75
438 480 5.104193 ACTGATTGGGCAGTTATCAGATCTT 60.104 40.000 18.35 0.00 46.42 2.40
439 481 5.759059 TGATTGGGCAGTTATCAGATCTTT 58.241 37.500 0.00 0.00 0.00 2.52
440 482 5.824624 TGATTGGGCAGTTATCAGATCTTTC 59.175 40.000 0.00 0.00 0.00 2.62
441 483 4.156455 TGGGCAGTTATCAGATCTTTCC 57.844 45.455 0.00 0.00 0.00 3.13
442 484 3.134458 GGGCAGTTATCAGATCTTTCCG 58.866 50.000 0.00 0.00 0.00 4.30
443 485 2.545946 GGCAGTTATCAGATCTTTCCGC 59.454 50.000 0.00 0.00 0.00 5.54
444 486 3.462021 GCAGTTATCAGATCTTTCCGCT 58.538 45.455 0.00 0.00 0.00 5.52
445 487 4.501571 GGCAGTTATCAGATCTTTCCGCTA 60.502 45.833 0.00 0.00 0.00 4.26
446 488 5.050490 GCAGTTATCAGATCTTTCCGCTAA 58.950 41.667 0.00 0.00 0.00 3.09
447 489 5.698545 GCAGTTATCAGATCTTTCCGCTAAT 59.301 40.000 0.00 0.00 0.00 1.73
448 490 6.128688 GCAGTTATCAGATCTTTCCGCTAATC 60.129 42.308 0.00 0.00 0.00 1.75
449 491 7.151308 CAGTTATCAGATCTTTCCGCTAATCT 58.849 38.462 0.00 0.00 0.00 2.40
450 492 7.328249 CAGTTATCAGATCTTTCCGCTAATCTC 59.672 40.741 0.00 0.00 0.00 2.75
451 493 4.230314 TCAGATCTTTCCGCTAATCTCG 57.770 45.455 0.00 0.00 0.00 4.04
452 494 2.728839 CAGATCTTTCCGCTAATCTCGC 59.271 50.000 0.00 0.00 0.00 5.03
458 500 4.786123 CGCTAATCTCGCGCAATG 57.214 55.556 8.75 0.00 44.33 2.82
459 501 1.927210 CGCTAATCTCGCGCAATGT 59.073 52.632 8.75 0.00 44.33 2.71
460 502 0.301687 CGCTAATCTCGCGCAATGTT 59.698 50.000 8.75 0.00 44.33 2.71
461 503 1.734885 GCTAATCTCGCGCAATGTTG 58.265 50.000 8.75 0.00 0.00 3.33
483 525 3.968649 CCAACTTTTGGTGATGTCTGTG 58.031 45.455 0.00 0.00 45.93 3.66
484 526 3.381272 CCAACTTTTGGTGATGTCTGTGT 59.619 43.478 0.00 0.00 45.93 3.72
485 527 4.142182 CCAACTTTTGGTGATGTCTGTGTT 60.142 41.667 0.00 0.00 45.93 3.32
486 528 5.067153 CCAACTTTTGGTGATGTCTGTGTTA 59.933 40.000 0.00 0.00 45.93 2.41
487 529 6.405286 CCAACTTTTGGTGATGTCTGTGTTAA 60.405 38.462 0.00 0.00 45.93 2.01
488 530 6.131544 ACTTTTGGTGATGTCTGTGTTAAC 57.868 37.500 0.00 0.00 0.00 2.01
489 531 5.650266 ACTTTTGGTGATGTCTGTGTTAACA 59.350 36.000 3.59 3.59 34.34 2.41
498 540 1.967762 CTGTGTTAACAGCGGCAATG 58.032 50.000 8.98 0.00 46.98 2.82
499 541 1.535028 CTGTGTTAACAGCGGCAATGA 59.465 47.619 8.98 0.00 46.98 2.57
500 542 2.158559 TGTGTTAACAGCGGCAATGAT 58.841 42.857 8.98 0.00 0.00 2.45
501 543 3.339141 TGTGTTAACAGCGGCAATGATA 58.661 40.909 8.98 0.00 0.00 2.15
502 544 3.753797 TGTGTTAACAGCGGCAATGATAA 59.246 39.130 8.98 0.00 0.00 1.75
503 545 4.095610 GTGTTAACAGCGGCAATGATAAC 58.904 43.478 8.98 8.81 36.80 1.89
504 546 3.753797 TGTTAACAGCGGCAATGATAACA 59.246 39.130 15.97 15.97 41.04 2.41
505 547 4.142708 TGTTAACAGCGGCAATGATAACAG 60.143 41.667 15.97 0.00 39.50 3.16
506 548 2.401583 ACAGCGGCAATGATAACAGA 57.598 45.000 1.45 0.00 0.00 3.41
507 549 2.009774 ACAGCGGCAATGATAACAGAC 58.990 47.619 1.45 0.00 0.00 3.51
508 550 1.004610 CAGCGGCAATGATAACAGACG 60.005 52.381 1.45 0.00 0.00 4.18
509 551 1.134818 AGCGGCAATGATAACAGACGA 60.135 47.619 1.45 0.00 0.00 4.20
510 552 1.663643 GCGGCAATGATAACAGACGAA 59.336 47.619 0.00 0.00 0.00 3.85
511 553 2.536928 GCGGCAATGATAACAGACGAAC 60.537 50.000 0.00 0.00 0.00 3.95
512 554 2.285026 CGGCAATGATAACAGACGAACG 60.285 50.000 0.00 0.00 0.00 3.95
513 555 2.671396 GGCAATGATAACAGACGAACGT 59.329 45.455 0.00 0.00 0.00 3.99
514 556 3.124636 GGCAATGATAACAGACGAACGTT 59.875 43.478 0.00 0.00 0.00 3.99
515 557 4.323751 GCAATGATAACAGACGAACGTTC 58.676 43.478 18.47 18.47 0.00 3.95
524 566 3.277133 CGAACGTTCGGTAGGGGA 58.723 61.111 36.53 0.00 46.30 4.81
525 567 1.138247 CGAACGTTCGGTAGGGGAG 59.862 63.158 36.53 10.79 46.30 4.30
526 568 1.514553 GAACGTTCGGTAGGGGAGG 59.485 63.158 13.36 0.00 0.00 4.30
527 569 1.228988 AACGTTCGGTAGGGGAGGT 60.229 57.895 0.00 0.00 0.00 3.85
528 570 1.253593 AACGTTCGGTAGGGGAGGTC 61.254 60.000 0.00 0.00 0.00 3.85
529 571 2.421399 CGTTCGGTAGGGGAGGTCC 61.421 68.421 0.00 0.00 0.00 4.46
539 581 4.459089 GGAGGTCCCAGCGAGCAC 62.459 72.222 0.00 0.00 41.71 4.40
540 582 4.459089 GAGGTCCCAGCGAGCACC 62.459 72.222 0.00 0.00 41.71 5.01
542 584 4.767255 GGTCCCAGCGAGCACCTG 62.767 72.222 0.00 0.00 38.92 4.00
546 588 2.979676 CCAGCGAGCACCTGCAAA 60.980 61.111 0.00 0.00 45.16 3.68
547 589 2.554636 CCAGCGAGCACCTGCAAAA 61.555 57.895 0.00 0.00 45.16 2.44
548 590 1.370900 CAGCGAGCACCTGCAAAAC 60.371 57.895 0.00 0.00 45.16 2.43
549 591 2.050077 GCGAGCACCTGCAAAACC 60.050 61.111 0.00 0.00 45.16 3.27
550 592 2.252260 CGAGCACCTGCAAAACCG 59.748 61.111 0.00 0.00 45.16 4.44
551 593 2.542907 CGAGCACCTGCAAAACCGT 61.543 57.895 0.00 0.00 45.16 4.83
552 594 1.282875 GAGCACCTGCAAAACCGTC 59.717 57.895 0.00 0.00 45.16 4.79
553 595 1.152963 AGCACCTGCAAAACCGTCT 60.153 52.632 0.00 0.00 45.16 4.18
554 596 1.008538 GCACCTGCAAAACCGTCTG 60.009 57.895 0.00 0.00 41.59 3.51
555 597 1.444119 GCACCTGCAAAACCGTCTGA 61.444 55.000 0.00 0.00 41.59 3.27
556 598 1.238439 CACCTGCAAAACCGTCTGAT 58.762 50.000 0.00 0.00 0.00 2.90
557 599 1.197721 CACCTGCAAAACCGTCTGATC 59.802 52.381 0.00 0.00 0.00 2.92
558 600 1.202758 ACCTGCAAAACCGTCTGATCA 60.203 47.619 0.00 0.00 0.00 2.92
559 601 1.197721 CCTGCAAAACCGTCTGATCAC 59.802 52.381 0.00 0.00 0.00 3.06
560 602 1.872952 CTGCAAAACCGTCTGATCACA 59.127 47.619 0.00 0.00 0.00 3.58
561 603 1.872952 TGCAAAACCGTCTGATCACAG 59.127 47.619 0.00 0.00 44.66 3.66
562 604 1.400242 GCAAAACCGTCTGATCACAGC 60.400 52.381 0.00 0.00 43.17 4.40
563 605 1.136252 CAAAACCGTCTGATCACAGCG 60.136 52.381 0.00 0.00 43.17 5.18
564 606 0.317160 AAACCGTCTGATCACAGCGA 59.683 50.000 9.52 0.00 43.17 4.93
565 607 0.317160 AACCGTCTGATCACAGCGAA 59.683 50.000 9.52 0.00 43.17 4.70
566 608 0.388649 ACCGTCTGATCACAGCGAAC 60.389 55.000 9.52 0.00 43.17 3.95
567 609 1.406219 CCGTCTGATCACAGCGAACG 61.406 60.000 9.52 0.00 43.17 3.95
568 610 1.704582 GTCTGATCACAGCGAACGC 59.295 57.895 11.31 11.31 43.17 4.84
569 611 1.446099 TCTGATCACAGCGAACGCC 60.446 57.895 15.44 0.09 43.17 5.68
570 612 1.446792 CTGATCACAGCGAACGCCT 60.447 57.895 15.44 0.80 43.17 5.52
571 613 1.690283 CTGATCACAGCGAACGCCTG 61.690 60.000 15.44 14.33 43.17 4.85
572 614 3.088500 GATCACAGCGAACGCCTGC 62.089 63.158 15.44 0.00 43.17 4.85
573 615 3.881952 ATCACAGCGAACGCCTGCA 62.882 57.895 15.44 4.93 43.17 4.41
574 616 3.425713 CACAGCGAACGCCTGCAT 61.426 61.111 15.44 0.00 43.17 3.96
575 617 3.425713 ACAGCGAACGCCTGCATG 61.426 61.111 15.44 9.34 43.17 4.06
576 618 3.120385 CAGCGAACGCCTGCATGA 61.120 61.111 15.44 0.00 43.17 3.07
577 619 3.121030 AGCGAACGCCTGCATGAC 61.121 61.111 15.44 0.00 43.17 3.06
578 620 4.166011 GCGAACGCCTGCATGACC 62.166 66.667 8.03 0.00 34.56 4.02
579 621 3.853330 CGAACGCCTGCATGACCG 61.853 66.667 0.00 0.00 0.00 4.79
580 622 2.742372 GAACGCCTGCATGACCGT 60.742 61.111 0.00 0.00 35.14 4.83
581 623 2.740714 GAACGCCTGCATGACCGTC 61.741 63.158 0.00 0.00 32.89 4.79
582 624 4.760047 ACGCCTGCATGACCGTCC 62.760 66.667 0.00 0.00 0.00 4.79
584 626 4.451150 GCCTGCATGACCGTCCGA 62.451 66.667 0.00 0.00 0.00 4.55
585 627 2.501128 CCTGCATGACCGTCCGAT 59.499 61.111 0.00 0.00 0.00 4.18
586 628 1.592669 CCTGCATGACCGTCCGATC 60.593 63.158 0.00 0.00 0.00 3.69
587 629 1.141665 CTGCATGACCGTCCGATCA 59.858 57.895 0.00 0.00 0.00 2.92
588 630 0.460109 CTGCATGACCGTCCGATCAA 60.460 55.000 0.00 0.00 0.00 2.57
589 631 0.036858 TGCATGACCGTCCGATCAAA 60.037 50.000 0.00 0.00 0.00 2.69
590 632 1.083489 GCATGACCGTCCGATCAAAA 58.917 50.000 0.00 0.00 0.00 2.44
591 633 1.670811 GCATGACCGTCCGATCAAAAT 59.329 47.619 0.00 0.00 0.00 1.82
592 634 2.097466 GCATGACCGTCCGATCAAAATT 59.903 45.455 0.00 0.00 0.00 1.82
593 635 3.311322 GCATGACCGTCCGATCAAAATTA 59.689 43.478 0.00 0.00 0.00 1.40
594 636 4.024048 GCATGACCGTCCGATCAAAATTAT 60.024 41.667 0.00 0.00 0.00 1.28
595 637 5.443261 CATGACCGTCCGATCAAAATTATG 58.557 41.667 0.00 0.00 0.00 1.90
596 638 3.311322 TGACCGTCCGATCAAAATTATGC 59.689 43.478 0.00 0.00 0.00 3.14
597 639 2.286833 ACCGTCCGATCAAAATTATGCG 59.713 45.455 0.00 0.00 0.00 4.73
598 640 2.349438 CCGTCCGATCAAAATTATGCGG 60.349 50.000 0.00 0.00 40.06 5.69
599 641 2.349438 CGTCCGATCAAAATTATGCGGG 60.349 50.000 0.00 0.00 39.24 6.13
600 642 2.616842 GTCCGATCAAAATTATGCGGGT 59.383 45.455 0.00 0.00 39.24 5.28
601 643 2.616376 TCCGATCAAAATTATGCGGGTG 59.384 45.455 0.00 0.00 39.24 4.61
602 644 2.287547 CCGATCAAAATTATGCGGGTGG 60.288 50.000 0.00 0.00 35.42 4.61
603 645 2.357637 CGATCAAAATTATGCGGGTGGT 59.642 45.455 0.00 0.00 0.00 4.16
604 646 3.562141 CGATCAAAATTATGCGGGTGGTA 59.438 43.478 0.00 0.00 0.00 3.25
605 647 4.319477 CGATCAAAATTATGCGGGTGGTAG 60.319 45.833 0.00 0.00 0.00 3.18
606 648 4.223556 TCAAAATTATGCGGGTGGTAGA 57.776 40.909 0.00 0.00 0.00 2.59
607 649 4.787551 TCAAAATTATGCGGGTGGTAGAT 58.212 39.130 0.00 0.00 0.00 1.98
608 650 5.197451 TCAAAATTATGCGGGTGGTAGATT 58.803 37.500 0.00 0.00 0.00 2.40
609 651 5.654650 TCAAAATTATGCGGGTGGTAGATTT 59.345 36.000 0.00 0.00 0.00 2.17
610 652 6.153680 TCAAAATTATGCGGGTGGTAGATTTT 59.846 34.615 0.00 0.00 0.00 1.82
611 653 6.538945 AAATTATGCGGGTGGTAGATTTTT 57.461 33.333 0.00 0.00 0.00 1.94
645 687 8.962884 AAAAATTGCCTTCTATGTCAAAAACT 57.037 26.923 0.00 0.00 0.00 2.66
646 688 7.951530 AAATTGCCTTCTATGTCAAAAACTG 57.048 32.000 0.00 0.00 0.00 3.16
647 689 6.655078 ATTGCCTTCTATGTCAAAAACTGT 57.345 33.333 0.00 0.00 0.00 3.55
648 690 6.463995 TTGCCTTCTATGTCAAAAACTGTT 57.536 33.333 0.00 0.00 0.00 3.16
649 691 7.575414 TTGCCTTCTATGTCAAAAACTGTTA 57.425 32.000 0.00 0.00 0.00 2.41
650 692 7.759489 TGCCTTCTATGTCAAAAACTGTTAT 57.241 32.000 0.00 0.00 0.00 1.89
651 693 7.592938 TGCCTTCTATGTCAAAAACTGTTATG 58.407 34.615 0.00 0.00 0.00 1.90
652 694 6.528072 GCCTTCTATGTCAAAAACTGTTATGC 59.472 38.462 0.00 0.00 0.00 3.14
653 695 7.575720 GCCTTCTATGTCAAAAACTGTTATGCT 60.576 37.037 0.00 0.00 0.00 3.79
654 696 7.965107 CCTTCTATGTCAAAAACTGTTATGCTC 59.035 37.037 0.00 0.00 0.00 4.26
655 697 8.621532 TTCTATGTCAAAAACTGTTATGCTCT 57.378 30.769 0.00 0.00 0.00 4.09
656 698 8.621532 TCTATGTCAAAAACTGTTATGCTCTT 57.378 30.769 0.00 0.00 0.00 2.85
657 699 8.506437 TCTATGTCAAAAACTGTTATGCTCTTG 58.494 33.333 0.00 0.00 0.00 3.02
658 700 6.449635 TGTCAAAAACTGTTATGCTCTTGT 57.550 33.333 0.00 0.00 0.00 3.16
659 701 6.264832 TGTCAAAAACTGTTATGCTCTTGTG 58.735 36.000 0.00 0.00 0.00 3.33
660 702 6.094742 TGTCAAAAACTGTTATGCTCTTGTGA 59.905 34.615 0.00 0.00 0.00 3.58
661 703 6.972328 GTCAAAAACTGTTATGCTCTTGTGAA 59.028 34.615 0.00 0.00 0.00 3.18
662 704 7.166473 GTCAAAAACTGTTATGCTCTTGTGAAG 59.834 37.037 0.00 0.00 0.00 3.02
663 705 6.942532 AAAACTGTTATGCTCTTGTGAAGA 57.057 33.333 0.00 0.00 35.87 2.87
664 706 6.942532 AAACTGTTATGCTCTTGTGAAGAA 57.057 33.333 0.00 0.00 37.02 2.52
665 707 6.551385 AACTGTTATGCTCTTGTGAAGAAG 57.449 37.500 0.00 0.00 37.02 2.85
666 708 5.858381 ACTGTTATGCTCTTGTGAAGAAGA 58.142 37.500 0.00 0.00 37.02 2.87
667 709 6.471146 ACTGTTATGCTCTTGTGAAGAAGAT 58.529 36.000 0.00 0.00 37.02 2.40
668 710 6.370994 ACTGTTATGCTCTTGTGAAGAAGATG 59.629 38.462 0.00 0.00 37.02 2.90
669 711 6.233434 TGTTATGCTCTTGTGAAGAAGATGT 58.767 36.000 0.00 0.00 37.02 3.06
670 712 6.369890 TGTTATGCTCTTGTGAAGAAGATGTC 59.630 38.462 0.00 0.00 37.02 3.06
671 713 4.341366 TGCTCTTGTGAAGAAGATGTCA 57.659 40.909 0.00 0.00 37.02 3.58
672 714 4.903054 TGCTCTTGTGAAGAAGATGTCAT 58.097 39.130 0.00 0.00 37.02 3.06
673 715 4.694037 TGCTCTTGTGAAGAAGATGTCATG 59.306 41.667 0.00 0.00 37.02 3.07
674 716 4.437121 GCTCTTGTGAAGAAGATGTCATGC 60.437 45.833 0.00 0.00 37.02 4.06
675 717 4.005650 TCTTGTGAAGAAGATGTCATGCC 58.994 43.478 0.00 0.00 33.83 4.40
676 718 2.715046 TGTGAAGAAGATGTCATGCCC 58.285 47.619 0.00 0.00 0.00 5.36
677 719 2.306805 TGTGAAGAAGATGTCATGCCCT 59.693 45.455 0.00 0.00 0.00 5.19
678 720 3.519107 TGTGAAGAAGATGTCATGCCCTA 59.481 43.478 0.00 0.00 0.00 3.53
679 721 4.019411 TGTGAAGAAGATGTCATGCCCTAA 60.019 41.667 0.00 0.00 0.00 2.69
680 722 4.333926 GTGAAGAAGATGTCATGCCCTAAC 59.666 45.833 0.00 0.00 0.00 2.34
681 723 4.225942 TGAAGAAGATGTCATGCCCTAACT 59.774 41.667 0.00 0.00 0.00 2.24
682 724 5.425217 TGAAGAAGATGTCATGCCCTAACTA 59.575 40.000 0.00 0.00 0.00 2.24
683 725 5.957771 AGAAGATGTCATGCCCTAACTAA 57.042 39.130 0.00 0.00 0.00 2.24
684 726 6.313519 AGAAGATGTCATGCCCTAACTAAA 57.686 37.500 0.00 0.00 0.00 1.85
685 727 6.721318 AGAAGATGTCATGCCCTAACTAAAA 58.279 36.000 0.00 0.00 0.00 1.52
686 728 7.349598 AGAAGATGTCATGCCCTAACTAAAAT 58.650 34.615 0.00 0.00 0.00 1.82
687 729 7.836183 AGAAGATGTCATGCCCTAACTAAAATT 59.164 33.333 0.00 0.00 0.00 1.82
688 730 7.338800 AGATGTCATGCCCTAACTAAAATTG 57.661 36.000 0.00 0.00 0.00 2.32
689 731 6.891908 AGATGTCATGCCCTAACTAAAATTGT 59.108 34.615 0.00 0.00 0.00 2.71
690 732 6.509418 TGTCATGCCCTAACTAAAATTGTC 57.491 37.500 0.00 0.00 0.00 3.18
691 733 6.007076 TGTCATGCCCTAACTAAAATTGTCA 58.993 36.000 0.00 0.00 0.00 3.58
692 734 6.150976 TGTCATGCCCTAACTAAAATTGTCAG 59.849 38.462 0.00 0.00 0.00 3.51
693 735 6.374333 GTCATGCCCTAACTAAAATTGTCAGA 59.626 38.462 0.00 0.00 0.00 3.27
694 736 6.945435 TCATGCCCTAACTAAAATTGTCAGAA 59.055 34.615 0.00 0.00 0.00 3.02
695 737 7.450014 TCATGCCCTAACTAAAATTGTCAGAAA 59.550 33.333 0.00 0.00 0.00 2.52
696 738 7.214467 TGCCCTAACTAAAATTGTCAGAAAG 57.786 36.000 0.00 0.00 0.00 2.62
697 739 7.001674 TGCCCTAACTAAAATTGTCAGAAAGA 58.998 34.615 0.00 0.00 0.00 2.52
710 752 3.665871 GTCAGAAAGACTTTCGCAAATGC 59.334 43.478 19.67 7.28 44.29 3.56
711 753 2.982470 CAGAAAGACTTTCGCAAATGCC 59.018 45.455 19.67 0.00 44.29 4.40
712 754 2.622942 AGAAAGACTTTCGCAAATGCCA 59.377 40.909 19.67 0.00 44.29 4.92
713 755 2.422276 AAGACTTTCGCAAATGCCAC 57.578 45.000 0.00 0.00 37.91 5.01
714 756 0.598065 AGACTTTCGCAAATGCCACC 59.402 50.000 0.00 0.00 37.91 4.61
715 757 0.313672 GACTTTCGCAAATGCCACCA 59.686 50.000 0.00 0.00 37.91 4.17
716 758 0.968405 ACTTTCGCAAATGCCACCAT 59.032 45.000 0.00 0.00 37.91 3.55
717 759 1.344114 ACTTTCGCAAATGCCACCATT 59.656 42.857 0.00 0.00 43.32 3.16
719 761 2.077413 TTCGCAAATGCCACCATTTC 57.923 45.000 0.00 0.00 45.99 2.17
720 762 1.255882 TCGCAAATGCCACCATTTCT 58.744 45.000 0.00 0.00 45.99 2.52
721 763 1.617850 TCGCAAATGCCACCATTTCTT 59.382 42.857 0.00 0.00 45.99 2.52
722 764 1.727880 CGCAAATGCCACCATTTCTTG 59.272 47.619 0.00 0.00 45.99 3.02
723 765 2.078392 GCAAATGCCACCATTTCTTGG 58.922 47.619 0.00 0.00 45.99 3.61
730 772 3.685435 CCATTTCTTGGCCAGCGT 58.315 55.556 5.11 0.00 39.09 5.07
731 773 1.966762 CCATTTCTTGGCCAGCGTT 59.033 52.632 5.11 0.00 39.09 4.84
732 774 0.109132 CCATTTCTTGGCCAGCGTTC 60.109 55.000 5.11 0.00 39.09 3.95
733 775 0.109132 CATTTCTTGGCCAGCGTTCC 60.109 55.000 5.11 0.00 0.00 3.62
734 776 0.251341 ATTTCTTGGCCAGCGTTCCT 60.251 50.000 5.11 0.00 0.00 3.36
735 777 0.889186 TTTCTTGGCCAGCGTTCCTC 60.889 55.000 5.11 0.00 0.00 3.71
736 778 3.121030 CTTGGCCAGCGTTCCTCG 61.121 66.667 5.11 0.00 43.12 4.63
737 779 4.697756 TTGGCCAGCGTTCCTCGG 62.698 66.667 5.11 0.00 40.26 4.63
739 781 4.162690 GGCCAGCGTTCCTCGGAT 62.163 66.667 0.00 0.00 40.26 4.18
740 782 2.792947 GGCCAGCGTTCCTCGGATA 61.793 63.158 0.00 0.00 40.26 2.59
741 783 1.367840 GCCAGCGTTCCTCGGATAT 59.632 57.895 0.00 0.00 40.26 1.63
742 784 0.667792 GCCAGCGTTCCTCGGATATC 60.668 60.000 0.00 0.00 40.26 1.63
743 785 0.387367 CCAGCGTTCCTCGGATATCG 60.387 60.000 0.00 0.00 40.26 2.92
744 786 1.004277 CAGCGTTCCTCGGATATCGC 61.004 60.000 16.75 16.75 40.26 4.58
745 787 2.081212 GCGTTCCTCGGATATCGCG 61.081 63.158 0.00 0.00 40.26 5.87
746 788 1.442184 CGTTCCTCGGATATCGCGG 60.442 63.158 6.13 5.73 44.51 6.46
747 789 1.658673 GTTCCTCGGATATCGCGGT 59.341 57.895 6.13 0.00 43.65 5.68
748 790 0.031721 GTTCCTCGGATATCGCGGTT 59.968 55.000 6.13 0.00 43.65 4.44
749 791 0.313043 TTCCTCGGATATCGCGGTTC 59.687 55.000 6.13 0.00 43.65 3.62
750 792 0.820482 TCCTCGGATATCGCGGTTCA 60.820 55.000 6.13 0.00 43.65 3.18
751 793 0.243907 CCTCGGATATCGCGGTTCAT 59.756 55.000 6.13 0.00 38.80 2.57
752 794 1.336887 CCTCGGATATCGCGGTTCATT 60.337 52.381 6.13 0.00 38.80 2.57
753 795 2.404215 CTCGGATATCGCGGTTCATTT 58.596 47.619 6.13 0.00 39.05 2.32
754 796 2.131972 TCGGATATCGCGGTTCATTTG 58.868 47.619 6.13 0.00 39.05 2.32
755 797 2.131972 CGGATATCGCGGTTCATTTGA 58.868 47.619 6.13 0.00 0.00 2.69
756 798 2.096909 CGGATATCGCGGTTCATTTGAC 60.097 50.000 6.13 0.00 0.00 3.18
757 799 2.869801 GGATATCGCGGTTCATTTGACA 59.130 45.455 6.13 0.00 0.00 3.58
758 800 3.311322 GGATATCGCGGTTCATTTGACAA 59.689 43.478 6.13 0.00 0.00 3.18
759 801 4.201871 GGATATCGCGGTTCATTTGACAAA 60.202 41.667 6.13 2.48 0.00 2.83
760 802 2.679355 TCGCGGTTCATTTGACAAAG 57.321 45.000 6.13 0.00 0.00 2.77
761 803 1.052287 CGCGGTTCATTTGACAAAGC 58.948 50.000 6.77 2.49 0.00 3.51
762 804 1.599171 CGCGGTTCATTTGACAAAGCA 60.599 47.619 6.77 0.00 0.00 3.91
763 805 2.468831 GCGGTTCATTTGACAAAGCAA 58.531 42.857 6.77 0.00 0.00 3.91
764 806 3.059166 GCGGTTCATTTGACAAAGCAAT 58.941 40.909 6.77 0.00 0.00 3.56
765 807 4.233789 GCGGTTCATTTGACAAAGCAATA 58.766 39.130 6.77 0.00 0.00 1.90
766 808 4.089923 GCGGTTCATTTGACAAAGCAATAC 59.910 41.667 6.77 0.91 0.00 1.89
767 809 5.218885 CGGTTCATTTGACAAAGCAATACA 58.781 37.500 6.77 0.00 0.00 2.29
768 810 5.343058 CGGTTCATTTGACAAAGCAATACAG 59.657 40.000 6.77 0.00 0.00 2.74
769 811 6.215845 GGTTCATTTGACAAAGCAATACAGT 58.784 36.000 6.77 0.00 0.00 3.55
770 812 7.367285 GGTTCATTTGACAAAGCAATACAGTA 58.633 34.615 6.77 0.00 0.00 2.74
771 813 7.865385 GGTTCATTTGACAAAGCAATACAGTAA 59.135 33.333 6.77 0.00 0.00 2.24
772 814 9.243637 GTTCATTTGACAAAGCAATACAGTAAA 57.756 29.630 6.77 0.00 0.00 2.01
773 815 9.462174 TTCATTTGACAAAGCAATACAGTAAAG 57.538 29.630 6.77 0.00 0.00 1.85
774 816 8.629158 TCATTTGACAAAGCAATACAGTAAAGT 58.371 29.630 6.77 0.00 0.00 2.66
775 817 8.905702 CATTTGACAAAGCAATACAGTAAAGTC 58.094 33.333 6.77 0.00 0.00 3.01
776 818 6.223138 TGACAAAGCAATACAGTAAAGTCG 57.777 37.500 0.00 0.00 0.00 4.18
777 819 5.178623 TGACAAAGCAATACAGTAAAGTCGG 59.821 40.000 0.00 0.00 0.00 4.79
778 820 4.454504 ACAAAGCAATACAGTAAAGTCGGG 59.545 41.667 0.00 0.00 0.00 5.14
779 821 3.975168 AGCAATACAGTAAAGTCGGGT 57.025 42.857 0.00 0.00 0.00 5.28
780 822 4.281898 AGCAATACAGTAAAGTCGGGTT 57.718 40.909 0.00 0.00 0.00 4.11
781 823 5.410355 AGCAATACAGTAAAGTCGGGTTA 57.590 39.130 0.00 0.00 0.00 2.85
782 824 5.797051 AGCAATACAGTAAAGTCGGGTTAA 58.203 37.500 0.00 0.00 0.00 2.01
783 825 5.873164 AGCAATACAGTAAAGTCGGGTTAAG 59.127 40.000 0.00 0.00 0.00 1.85
784 826 5.870978 GCAATACAGTAAAGTCGGGTTAAGA 59.129 40.000 0.00 0.00 0.00 2.10
785 827 6.035758 GCAATACAGTAAAGTCGGGTTAAGAG 59.964 42.308 0.00 0.00 0.00 2.85
786 828 3.922910 ACAGTAAAGTCGGGTTAAGAGC 58.077 45.455 0.00 0.00 0.00 4.09
787 829 2.921754 CAGTAAAGTCGGGTTAAGAGCG 59.078 50.000 0.00 0.00 0.00 5.03
788 830 1.657594 GTAAAGTCGGGTTAAGAGCGC 59.342 52.381 0.00 0.00 0.00 5.92
789 831 0.320697 AAAGTCGGGTTAAGAGCGCT 59.679 50.000 11.27 11.27 0.00 5.92
790 832 0.389948 AAGTCGGGTTAAGAGCGCTG 60.390 55.000 18.48 0.00 0.00 5.18
791 833 2.125673 TCGGGTTAAGAGCGCTGC 60.126 61.111 18.48 6.71 0.00 5.25
792 834 3.554692 CGGGTTAAGAGCGCTGCG 61.555 66.667 18.48 19.17 0.00 5.18
793 835 2.125673 GGGTTAAGAGCGCTGCGA 60.126 61.111 28.07 0.14 0.00 5.10
794 836 2.453638 GGGTTAAGAGCGCTGCGAC 61.454 63.158 28.07 18.05 0.00 5.19
795 837 1.736645 GGTTAAGAGCGCTGCGACA 60.737 57.895 28.07 1.60 0.00 4.35
796 838 1.289109 GGTTAAGAGCGCTGCGACAA 61.289 55.000 28.07 8.09 0.00 3.18
797 839 0.721718 GTTAAGAGCGCTGCGACAAT 59.278 50.000 28.07 10.97 0.00 2.71
798 840 1.128692 GTTAAGAGCGCTGCGACAATT 59.871 47.619 28.07 15.64 0.00 2.32
799 841 0.721154 TAAGAGCGCTGCGACAATTG 59.279 50.000 28.07 3.24 0.00 2.32
800 842 1.230635 AAGAGCGCTGCGACAATTGT 61.231 50.000 28.07 11.78 0.00 2.71
801 843 1.207593 GAGCGCTGCGACAATTGTT 59.792 52.632 28.07 0.00 0.00 2.83
802 844 0.442310 GAGCGCTGCGACAATTGTTA 59.558 50.000 28.07 1.93 0.00 2.41
803 845 0.443869 AGCGCTGCGACAATTGTTAG 59.556 50.000 28.07 12.37 0.00 2.34
804 846 0.165944 GCGCTGCGACAATTGTTAGT 59.834 50.000 28.07 0.00 0.00 2.24
805 847 1.399727 GCGCTGCGACAATTGTTAGTT 60.400 47.619 28.07 0.00 0.00 2.24
806 848 2.916111 CGCTGCGACAATTGTTAGTTT 58.084 42.857 18.66 0.00 0.00 2.66
807 849 2.902484 CGCTGCGACAATTGTTAGTTTC 59.098 45.455 18.66 0.00 0.00 2.78
808 850 3.234386 GCTGCGACAATTGTTAGTTTCC 58.766 45.455 13.36 0.00 0.00 3.13
809 851 3.479006 CTGCGACAATTGTTAGTTTCCG 58.521 45.455 13.36 10.61 0.00 4.30
810 852 2.873472 TGCGACAATTGTTAGTTTCCGT 59.127 40.909 13.36 0.00 0.00 4.69
811 853 3.223157 GCGACAATTGTTAGTTTCCGTG 58.777 45.455 13.36 0.00 0.00 4.94
812 854 3.223157 CGACAATTGTTAGTTTCCGTGC 58.777 45.455 13.36 0.00 0.00 5.34
813 855 3.561503 GACAATTGTTAGTTTCCGTGCC 58.438 45.455 13.36 0.00 0.00 5.01
814 856 2.295070 ACAATTGTTAGTTTCCGTGCCC 59.705 45.455 4.92 0.00 0.00 5.36
815 857 2.556622 CAATTGTTAGTTTCCGTGCCCT 59.443 45.455 0.00 0.00 0.00 5.19
816 858 3.706600 ATTGTTAGTTTCCGTGCCCTA 57.293 42.857 0.00 0.00 0.00 3.53
817 859 2.754946 TGTTAGTTTCCGTGCCCTAG 57.245 50.000 0.00 0.00 0.00 3.02
818 860 2.250031 TGTTAGTTTCCGTGCCCTAGA 58.750 47.619 0.00 0.00 0.00 2.43
819 861 2.232941 TGTTAGTTTCCGTGCCCTAGAG 59.767 50.000 0.00 0.00 0.00 2.43
820 862 0.822164 TAGTTTCCGTGCCCTAGAGC 59.178 55.000 0.00 0.00 0.00 4.09
821 863 0.905337 AGTTTCCGTGCCCTAGAGCT 60.905 55.000 0.00 0.00 0.00 4.09
822 864 0.741221 GTTTCCGTGCCCTAGAGCTG 60.741 60.000 0.00 0.00 0.00 4.24
823 865 1.192146 TTTCCGTGCCCTAGAGCTGT 61.192 55.000 0.00 0.00 0.00 4.40
824 866 1.888436 TTCCGTGCCCTAGAGCTGTG 61.888 60.000 0.00 0.00 0.00 3.66
825 867 2.351244 CCGTGCCCTAGAGCTGTGA 61.351 63.158 0.00 0.00 0.00 3.58
826 868 1.140589 CGTGCCCTAGAGCTGTGAG 59.859 63.158 0.00 0.00 0.00 3.51
827 869 1.153469 GTGCCCTAGAGCTGTGAGC 60.153 63.158 0.00 0.00 42.84 4.26
828 870 1.610379 TGCCCTAGAGCTGTGAGCA 60.610 57.895 0.00 0.00 45.56 4.26
829 871 1.143620 GCCCTAGAGCTGTGAGCAG 59.856 63.158 0.00 0.00 45.56 4.24
838 880 3.217242 CTGTGAGCAGCGGTTAACT 57.783 52.632 5.42 0.00 35.77 2.24
839 881 1.071605 CTGTGAGCAGCGGTTAACTC 58.928 55.000 5.42 2.86 35.77 3.01
840 882 0.320421 TGTGAGCAGCGGTTAACTCC 60.320 55.000 5.42 0.00 0.00 3.85
841 883 1.019805 GTGAGCAGCGGTTAACTCCC 61.020 60.000 5.42 0.00 0.00 4.30
847 889 2.435410 CGGTTAACTCCCGTGGCC 60.435 66.667 5.42 0.00 40.59 5.36
848 890 2.951101 CGGTTAACTCCCGTGGCCT 61.951 63.158 3.32 0.00 40.59 5.19
849 891 1.377612 GGTTAACTCCCGTGGCCTT 59.622 57.895 3.32 0.00 0.00 4.35
850 892 0.958876 GGTTAACTCCCGTGGCCTTG 60.959 60.000 3.32 0.00 0.00 3.61
851 893 0.958876 GTTAACTCCCGTGGCCTTGG 60.959 60.000 3.32 5.44 0.00 3.61
852 894 1.420532 TTAACTCCCGTGGCCTTGGT 61.421 55.000 3.32 0.00 0.00 3.67
853 895 0.544833 TAACTCCCGTGGCCTTGGTA 60.545 55.000 3.32 0.00 0.00 3.25
854 896 1.838073 AACTCCCGTGGCCTTGGTAG 61.838 60.000 3.32 4.45 0.00 3.18
855 897 2.203877 TCCCGTGGCCTTGGTAGT 60.204 61.111 3.32 0.00 0.00 2.73
856 898 2.240162 CTCCCGTGGCCTTGGTAGTC 62.240 65.000 3.32 0.00 0.00 2.59
857 899 2.125673 CCGTGGCCTTGGTAGTCG 60.126 66.667 3.32 0.00 0.00 4.18
858 900 2.125673 CGTGGCCTTGGTAGTCGG 60.126 66.667 3.32 0.00 0.00 4.79
859 901 2.436115 GTGGCCTTGGTAGTCGGC 60.436 66.667 3.32 0.00 43.03 5.54
860 902 2.606519 TGGCCTTGGTAGTCGGCT 60.607 61.111 3.32 0.00 43.29 5.52
861 903 2.187163 GGCCTTGGTAGTCGGCTC 59.813 66.667 0.00 0.00 43.29 4.70
862 904 2.187163 GCCTTGGTAGTCGGCTCC 59.813 66.667 0.00 0.00 40.62 4.70
863 905 2.901042 CCTTGGTAGTCGGCTCCC 59.099 66.667 0.00 0.00 0.00 4.30
864 906 1.686110 CCTTGGTAGTCGGCTCCCT 60.686 63.158 0.00 0.00 0.00 4.20
865 907 1.677637 CCTTGGTAGTCGGCTCCCTC 61.678 65.000 0.00 0.00 0.00 4.30
866 908 0.684805 CTTGGTAGTCGGCTCCCTCT 60.685 60.000 0.00 0.00 0.00 3.69
867 909 0.683504 TTGGTAGTCGGCTCCCTCTC 60.684 60.000 0.00 0.00 0.00 3.20
868 910 1.076923 GGTAGTCGGCTCCCTCTCA 60.077 63.158 0.00 0.00 0.00 3.27
869 911 0.683504 GGTAGTCGGCTCCCTCTCAA 60.684 60.000 0.00 0.00 0.00 3.02
870 912 1.183549 GTAGTCGGCTCCCTCTCAAA 58.816 55.000 0.00 0.00 0.00 2.69
871 913 1.757699 GTAGTCGGCTCCCTCTCAAAT 59.242 52.381 0.00 0.00 0.00 2.32
872 914 1.280457 AGTCGGCTCCCTCTCAAATT 58.720 50.000 0.00 0.00 0.00 1.82
873 915 1.630878 AGTCGGCTCCCTCTCAAATTT 59.369 47.619 0.00 0.00 0.00 1.82
922 965 1.227380 CTCCTCTCGGGCGATTTGG 60.227 63.158 0.00 0.00 34.39 3.28
1074 1118 2.907897 CTAACGCCGCCCTGGAAGAG 62.908 65.000 0.00 0.00 42.00 2.85
1165 1209 0.736325 CAAAGAGAGCGTACGGTGGG 60.736 60.000 26.54 3.61 0.00 4.61
1175 1219 0.106519 GTACGGTGGGTAGCCCTAGA 60.107 60.000 8.85 0.00 45.70 2.43
1207 1251 2.069273 CCGACAAGAATTTCTCGCAGT 58.931 47.619 0.00 0.00 0.00 4.40
1242 1286 4.115199 ATGAGGGCGGCCTGGAAC 62.115 66.667 38.01 21.45 0.00 3.62
1425 1470 4.368874 TGTGGTTTTTGATCATATGCCG 57.631 40.909 0.00 0.00 0.00 5.69
1539 1584 2.031857 GCGTTTAAATGACAACACCCGA 60.032 45.455 11.68 0.00 0.00 5.14
1540 1585 3.365565 GCGTTTAAATGACAACACCCGAT 60.366 43.478 11.68 0.00 0.00 4.18
1682 1728 0.249868 TGCAGTTTCTGTGGTCGGAG 60.250 55.000 0.00 0.00 33.43 4.63
1698 1744 1.338105 CGGAGAGGTCATGAGCACAAA 60.338 52.381 25.71 0.00 0.00 2.83
1716 1762 3.070018 CAAAGAGTGTGGATCTGGTGTC 58.930 50.000 0.00 0.00 0.00 3.67
1755 1801 5.189736 TCTCAAGTTTGGTGACTGGCTATAT 59.810 40.000 0.00 0.00 0.00 0.86
1819 1865 1.746220 GAGCAGATACACCTCGTCAGT 59.254 52.381 0.00 0.00 0.00 3.41
1913 1960 1.912043 AGCCACAAGCCTAGTGAAGAT 59.088 47.619 2.67 0.00 45.47 2.40
1927 1974 2.595009 GAAGATCCCGGGTGCACTCC 62.595 65.000 22.86 14.99 0.00 3.85
1959 2006 5.538053 TGATAGAGATGCGAGGAAGAGATTT 59.462 40.000 0.00 0.00 0.00 2.17
1971 2018 5.749462 AGGAAGAGATTTAACATGGACAGG 58.251 41.667 0.00 0.00 0.00 4.00
2050 2097 0.836606 TGGCAGTGTTCAAGACCTGA 59.163 50.000 0.00 0.00 31.87 3.86
2085 2132 1.203523 CCAACGAGCAGCTCTTCTAGT 59.796 52.381 20.39 7.43 0.00 2.57
2106 2153 6.081872 AGTAGTAAACGTGTCAAGCTTACT 57.918 37.500 15.69 15.69 35.48 2.24
2123 2170 5.545723 AGCTTACTAAGGATCATGCTACCAT 59.454 40.000 0.00 0.00 0.00 3.55
2177 2224 1.663695 CGGACGCAATGAATACCCTT 58.336 50.000 0.00 0.00 0.00 3.95
2401 2814 1.606601 TCCCTCTCTGTCACGGTGG 60.607 63.158 8.50 0.00 0.00 4.61
2424 2837 6.806249 TGGTTGATTCTTGCAATCGTTTTATC 59.194 34.615 0.00 0.00 0.00 1.75
2456 2869 2.220586 TCGATGGTGGGTCAGGCAA 61.221 57.895 0.00 0.00 0.00 4.52
2464 2877 0.482446 TGGGTCAGGCAATTCTTGGT 59.518 50.000 0.00 0.00 0.00 3.67
2484 2897 1.985159 TGAGGCACCTTTGTCTATGGT 59.015 47.619 0.00 0.00 38.01 3.55
2504 2917 1.073125 TGAGCCTCGGGTTGAAAATCA 59.927 47.619 0.00 0.00 0.00 2.57
2571 2984 1.671054 GTCGTGGATGGTGTGTGGG 60.671 63.158 0.00 0.00 0.00 4.61
2589 3002 5.047377 GTGTGGGGATTTCAATGAAGCTTTA 60.047 40.000 0.00 0.00 0.00 1.85
2668 3102 0.694771 AGATTGCTTGGAGAGGTGCA 59.305 50.000 0.00 0.00 0.00 4.57
2730 3183 3.393426 AACAATGGCCAGGATTCAGAT 57.607 42.857 13.05 0.00 0.00 2.90
2745 3198 3.057969 TCAGATCGCAATGTTCAGGTT 57.942 42.857 0.00 0.00 0.00 3.50
2762 3215 1.355971 GTTCGCTTGGATCGTGCTTA 58.644 50.000 0.00 0.00 0.00 3.09
2766 3219 0.041839 GCTTGGATCGTGCTTATGCG 60.042 55.000 0.00 0.00 43.34 4.73
2772 3225 0.595053 ATCGTGCTTATGCGGACGAG 60.595 55.000 17.21 0.00 45.84 4.18
2777 3230 1.090052 GCTTATGCGGACGAGGCTTT 61.090 55.000 0.00 0.00 0.00 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
128 134 4.008933 CCTCCGGCGATGGATCCC 62.009 72.222 9.30 0.00 37.41 3.85
129 135 2.917751 TCCTCCGGCGATGGATCC 60.918 66.667 9.30 4.20 37.41 3.36
130 136 1.872197 CTCTCCTCCGGCGATGGATC 61.872 65.000 18.11 0.00 37.41 3.36
133 139 2.519541 TCTCTCCTCCGGCGATGG 60.520 66.667 9.30 10.38 0.00 3.51
153 159 2.795297 CGCCACCGTCTCTCTCTC 59.205 66.667 0.00 0.00 0.00 3.20
161 167 4.796231 ATCACGAGCGCCACCGTC 62.796 66.667 15.52 0.38 36.83 4.79
162 168 3.876589 AAATCACGAGCGCCACCGT 62.877 57.895 13.16 13.16 39.88 4.83
163 169 3.118454 AAATCACGAGCGCCACCG 61.118 61.111 2.29 8.50 37.57 4.94
164 170 1.970917 CTCAAATCACGAGCGCCACC 61.971 60.000 2.29 0.00 0.00 4.61
166 172 1.741401 CCTCAAATCACGAGCGCCA 60.741 57.895 2.29 0.00 0.00 5.69
167 173 2.464459 CCCTCAAATCACGAGCGCC 61.464 63.158 2.29 0.00 0.00 6.53
182 193 4.101077 CCTGCTCCCTCCCTCCCT 62.101 72.222 0.00 0.00 0.00 4.20
185 196 3.478274 CTGCCTGCTCCCTCCCTC 61.478 72.222 0.00 0.00 0.00 4.30
193 204 4.537433 CTACCGCCCTGCCTGCTC 62.537 72.222 0.00 0.00 0.00 4.26
196 207 4.473520 CCACTACCGCCCTGCCTG 62.474 72.222 0.00 0.00 0.00 4.85
209 220 2.591715 GTGCCAACTCACGCCACT 60.592 61.111 0.00 0.00 0.00 4.00
298 336 3.440173 CCTTGATTGACGGCAGTGTAATT 59.560 43.478 0.00 0.00 0.00 1.40
299 337 3.009723 CCTTGATTGACGGCAGTGTAAT 58.990 45.455 0.00 0.00 0.00 1.89
300 338 2.422597 CCTTGATTGACGGCAGTGTAA 58.577 47.619 0.00 0.00 0.00 2.41
302 340 0.606401 CCCTTGATTGACGGCAGTGT 60.606 55.000 0.00 0.00 0.00 3.55
303 341 0.321564 TCCCTTGATTGACGGCAGTG 60.322 55.000 0.00 0.00 0.00 3.66
304 342 0.620556 ATCCCTTGATTGACGGCAGT 59.379 50.000 0.00 0.00 0.00 4.40
305 343 2.620251 TATCCCTTGATTGACGGCAG 57.380 50.000 0.00 0.00 32.18 4.85
306 344 3.278574 CTTTATCCCTTGATTGACGGCA 58.721 45.455 0.00 0.00 32.18 5.69
307 345 3.279434 ACTTTATCCCTTGATTGACGGC 58.721 45.455 0.00 0.00 32.18 5.68
308 346 4.096382 CCAACTTTATCCCTTGATTGACGG 59.904 45.833 0.00 0.00 32.18 4.79
310 348 7.696992 TTACCAACTTTATCCCTTGATTGAC 57.303 36.000 0.00 0.00 32.18 3.18
311 349 8.713708 TTTTACCAACTTTATCCCTTGATTGA 57.286 30.769 0.00 0.00 32.18 2.57
334 376 5.593502 ACAAATCATGGCCACAACAATTTTT 59.406 32.000 8.16 0.39 0.00 1.94
335 377 5.131784 ACAAATCATGGCCACAACAATTTT 58.868 33.333 8.16 0.00 0.00 1.82
336 378 4.716794 ACAAATCATGGCCACAACAATTT 58.283 34.783 8.16 7.18 0.00 1.82
337 379 4.354893 ACAAATCATGGCCACAACAATT 57.645 36.364 8.16 0.35 0.00 2.32
338 380 4.354893 AACAAATCATGGCCACAACAAT 57.645 36.364 8.16 0.00 0.00 2.71
339 381 3.834489 AACAAATCATGGCCACAACAA 57.166 38.095 8.16 0.00 0.00 2.83
340 382 3.638627 TGTAACAAATCATGGCCACAACA 59.361 39.130 8.16 0.00 0.00 3.33
341 383 4.022416 TCTGTAACAAATCATGGCCACAAC 60.022 41.667 8.16 0.00 0.00 3.32
342 384 4.148079 TCTGTAACAAATCATGGCCACAA 58.852 39.130 8.16 0.00 0.00 3.33
343 385 3.760738 TCTGTAACAAATCATGGCCACA 58.239 40.909 8.16 0.00 0.00 4.17
344 386 4.675510 CATCTGTAACAAATCATGGCCAC 58.324 43.478 8.16 0.00 0.00 5.01
345 387 3.130869 GCATCTGTAACAAATCATGGCCA 59.869 43.478 8.56 8.56 0.00 5.36
346 388 3.491447 GGCATCTGTAACAAATCATGGCC 60.491 47.826 0.00 0.00 0.00 5.36
347 389 3.130869 TGGCATCTGTAACAAATCATGGC 59.869 43.478 0.00 0.00 0.00 4.40
348 390 4.987408 TGGCATCTGTAACAAATCATGG 57.013 40.909 0.00 0.00 0.00 3.66
349 391 7.655236 TTTTTGGCATCTGTAACAAATCATG 57.345 32.000 0.00 0.00 33.40 3.07
350 392 8.723311 CAATTTTTGGCATCTGTAACAAATCAT 58.277 29.630 0.00 0.00 33.40 2.45
351 393 7.307870 GCAATTTTTGGCATCTGTAACAAATCA 60.308 33.333 0.00 0.00 33.40 2.57
352 394 7.017055 GCAATTTTTGGCATCTGTAACAAATC 58.983 34.615 0.00 0.00 33.40 2.17
353 395 6.901265 GCAATTTTTGGCATCTGTAACAAAT 58.099 32.000 0.00 0.00 33.40 2.32
354 396 6.297694 GCAATTTTTGGCATCTGTAACAAA 57.702 33.333 0.00 0.00 0.00 2.83
355 397 5.921004 GCAATTTTTGGCATCTGTAACAA 57.079 34.783 0.00 0.00 0.00 2.83
367 409 5.818336 TGAATATCTGCATGGCAATTTTTGG 59.182 36.000 0.00 0.00 38.41 3.28
368 410 6.511121 GCTGAATATCTGCATGGCAATTTTTG 60.511 38.462 0.00 0.00 40.47 2.44
369 411 5.526111 GCTGAATATCTGCATGGCAATTTTT 59.474 36.000 0.00 0.00 40.47 1.94
370 412 5.054477 GCTGAATATCTGCATGGCAATTTT 58.946 37.500 0.00 0.00 40.47 1.82
371 413 4.100344 TGCTGAATATCTGCATGGCAATTT 59.900 37.500 7.69 0.00 44.54 1.82
372 414 3.639561 TGCTGAATATCTGCATGGCAATT 59.360 39.130 7.69 0.00 44.54 2.32
373 415 3.227614 TGCTGAATATCTGCATGGCAAT 58.772 40.909 7.69 0.00 44.54 3.56
374 416 2.657143 TGCTGAATATCTGCATGGCAA 58.343 42.857 7.69 0.00 44.54 4.52
375 417 2.351706 TGCTGAATATCTGCATGGCA 57.648 45.000 7.69 0.00 44.54 4.92
392 434 6.805271 CAGTAGGCAATATATTCAGCAAATGC 59.195 38.462 9.31 0.00 42.49 3.56
393 435 8.102800 TCAGTAGGCAATATATTCAGCAAATG 57.897 34.615 9.31 6.73 0.00 2.32
394 436 8.874744 ATCAGTAGGCAATATATTCAGCAAAT 57.125 30.769 9.31 0.00 0.00 2.32
395 437 8.570488 CAATCAGTAGGCAATATATTCAGCAAA 58.430 33.333 9.31 0.00 0.00 3.68
396 438 7.175467 CCAATCAGTAGGCAATATATTCAGCAA 59.825 37.037 9.31 0.00 0.00 3.91
397 439 6.656270 CCAATCAGTAGGCAATATATTCAGCA 59.344 38.462 9.31 0.00 0.00 4.41
398 440 6.094603 CCCAATCAGTAGGCAATATATTCAGC 59.905 42.308 0.00 0.00 0.00 4.26
399 441 6.094603 GCCCAATCAGTAGGCAATATATTCAG 59.905 42.308 0.00 0.00 46.34 3.02
400 442 5.945784 GCCCAATCAGTAGGCAATATATTCA 59.054 40.000 0.00 0.00 46.34 2.57
401 443 6.442513 GCCCAATCAGTAGGCAATATATTC 57.557 41.667 0.00 0.00 46.34 1.75
410 452 2.710096 TAACTGCCCAATCAGTAGGC 57.290 50.000 0.00 0.00 45.77 3.93
411 453 4.101585 TCTGATAACTGCCCAATCAGTAGG 59.898 45.833 10.42 0.00 45.77 3.18
412 454 5.282055 TCTGATAACTGCCCAATCAGTAG 57.718 43.478 10.42 0.00 45.77 2.57
413 455 5.604231 AGATCTGATAACTGCCCAATCAGTA 59.396 40.000 10.42 0.71 45.77 2.74
415 457 4.970711 AGATCTGATAACTGCCCAATCAG 58.029 43.478 0.00 5.41 45.19 2.90
416 458 5.378230 AAGATCTGATAACTGCCCAATCA 57.622 39.130 0.00 0.00 0.00 2.57
417 459 5.240403 GGAAAGATCTGATAACTGCCCAATC 59.760 44.000 0.00 0.00 0.00 2.67
418 460 5.136105 GGAAAGATCTGATAACTGCCCAAT 58.864 41.667 0.00 0.00 0.00 3.16
419 461 4.526970 GGAAAGATCTGATAACTGCCCAA 58.473 43.478 0.00 0.00 0.00 4.12
420 462 3.432186 CGGAAAGATCTGATAACTGCCCA 60.432 47.826 0.00 0.00 33.44 5.36
421 463 3.134458 CGGAAAGATCTGATAACTGCCC 58.866 50.000 0.00 0.00 33.44 5.36
422 464 2.545946 GCGGAAAGATCTGATAACTGCC 59.454 50.000 0.00 0.00 33.44 4.85
423 465 3.462021 AGCGGAAAGATCTGATAACTGC 58.538 45.455 0.00 3.51 33.44 4.40
424 466 7.151308 AGATTAGCGGAAAGATCTGATAACTG 58.849 38.462 0.00 0.00 43.49 3.16
425 467 7.296628 AGATTAGCGGAAAGATCTGATAACT 57.703 36.000 0.00 0.00 43.49 2.24
426 468 6.306837 CGAGATTAGCGGAAAGATCTGATAAC 59.693 42.308 0.00 0.00 43.49 1.89
427 469 6.382608 CGAGATTAGCGGAAAGATCTGATAA 58.617 40.000 0.00 0.00 44.46 1.75
428 470 5.620205 GCGAGATTAGCGGAAAGATCTGATA 60.620 44.000 0.00 0.00 33.44 2.15
429 471 4.804108 CGAGATTAGCGGAAAGATCTGAT 58.196 43.478 0.00 0.00 33.44 2.90
430 472 3.551046 GCGAGATTAGCGGAAAGATCTGA 60.551 47.826 0.00 0.00 33.44 3.27
431 473 2.728839 GCGAGATTAGCGGAAAGATCTG 59.271 50.000 0.00 0.00 34.87 2.90
432 474 3.019933 GCGAGATTAGCGGAAAGATCT 57.980 47.619 0.00 0.00 0.00 2.75
442 484 1.734885 CAACATTGCGCGAGATTAGC 58.265 50.000 12.10 0.00 0.00 3.09
443 485 1.734885 GCAACATTGCGCGAGATTAG 58.265 50.000 12.10 0.00 45.11 1.73
444 486 3.895806 GCAACATTGCGCGAGATTA 57.104 47.368 12.10 0.00 45.11 1.75
445 487 4.771684 GCAACATTGCGCGAGATT 57.228 50.000 12.10 0.00 45.11 2.40
463 505 4.637483 ACACAGACATCACCAAAAGTTG 57.363 40.909 0.00 0.00 0.00 3.16
464 506 6.151985 TGTTAACACAGACATCACCAAAAGTT 59.848 34.615 3.59 0.00 0.00 2.66
465 507 5.650266 TGTTAACACAGACATCACCAAAAGT 59.350 36.000 3.59 0.00 0.00 2.66
466 508 6.130298 TGTTAACACAGACATCACCAAAAG 57.870 37.500 3.59 0.00 0.00 2.27
480 522 1.598882 TCATTGCCGCTGTTAACACA 58.401 45.000 3.59 0.00 0.00 3.72
481 523 2.919666 ATCATTGCCGCTGTTAACAC 57.080 45.000 3.59 1.32 0.00 3.32
482 524 3.753797 TGTTATCATTGCCGCTGTTAACA 59.246 39.130 8.28 8.28 36.86 2.41
483 525 4.094294 TCTGTTATCATTGCCGCTGTTAAC 59.906 41.667 0.00 0.00 32.88 2.01
484 526 4.094294 GTCTGTTATCATTGCCGCTGTTAA 59.906 41.667 0.00 0.00 0.00 2.01
485 527 3.621268 GTCTGTTATCATTGCCGCTGTTA 59.379 43.478 0.00 0.00 0.00 2.41
486 528 2.420022 GTCTGTTATCATTGCCGCTGTT 59.580 45.455 0.00 0.00 0.00 3.16
487 529 2.009774 GTCTGTTATCATTGCCGCTGT 58.990 47.619 0.00 0.00 0.00 4.40
488 530 1.004610 CGTCTGTTATCATTGCCGCTG 60.005 52.381 0.00 0.00 0.00 5.18
489 531 1.134818 TCGTCTGTTATCATTGCCGCT 60.135 47.619 0.00 0.00 0.00 5.52
490 532 1.286501 TCGTCTGTTATCATTGCCGC 58.713 50.000 0.00 0.00 0.00 6.53
491 533 2.285026 CGTTCGTCTGTTATCATTGCCG 60.285 50.000 0.00 0.00 0.00 5.69
492 534 2.671396 ACGTTCGTCTGTTATCATTGCC 59.329 45.455 0.00 0.00 0.00 4.52
493 535 3.991605 ACGTTCGTCTGTTATCATTGC 57.008 42.857 0.00 0.00 0.00 3.56
494 536 4.555801 CGAACGTTCGTCTGTTATCATTG 58.444 43.478 35.92 8.84 45.09 2.82
495 537 4.817987 CGAACGTTCGTCTGTTATCATT 57.182 40.909 35.92 0.00 45.09 2.57
508 550 1.253593 ACCTCCCCTACCGAACGTTC 61.254 60.000 18.47 18.47 0.00 3.95
509 551 1.228988 ACCTCCCCTACCGAACGTT 60.229 57.895 0.00 0.00 0.00 3.99
510 552 1.680314 GACCTCCCCTACCGAACGT 60.680 63.158 0.00 0.00 0.00 3.99
511 553 2.421399 GGACCTCCCCTACCGAACG 61.421 68.421 0.00 0.00 0.00 3.95
512 554 3.626394 GGACCTCCCCTACCGAAC 58.374 66.667 0.00 0.00 0.00 3.95
522 564 4.459089 GTGCTCGCTGGGACCTCC 62.459 72.222 0.00 0.00 0.00 4.30
523 565 4.459089 GGTGCTCGCTGGGACCTC 62.459 72.222 8.71 0.00 43.09 3.85
525 567 4.767255 CAGGTGCTCGCTGGGACC 62.767 72.222 8.07 8.07 46.08 4.46
529 571 2.554636 TTTTGCAGGTGCTCGCTGG 61.555 57.895 3.18 0.00 42.66 4.85
530 572 1.370900 GTTTTGCAGGTGCTCGCTG 60.371 57.895 3.18 0.00 42.66 5.18
531 573 2.555547 GGTTTTGCAGGTGCTCGCT 61.556 57.895 3.18 0.00 42.66 4.93
532 574 2.050077 GGTTTTGCAGGTGCTCGC 60.050 61.111 3.18 0.00 42.66 5.03
533 575 2.252260 CGGTTTTGCAGGTGCTCG 59.748 61.111 3.18 0.00 42.66 5.03
534 576 1.166531 AGACGGTTTTGCAGGTGCTC 61.167 55.000 3.18 0.00 42.66 4.26
535 577 1.152963 AGACGGTTTTGCAGGTGCT 60.153 52.632 3.18 0.00 42.66 4.40
536 578 1.008538 CAGACGGTTTTGCAGGTGC 60.009 57.895 0.00 0.00 42.50 5.01
537 579 1.197721 GATCAGACGGTTTTGCAGGTG 59.802 52.381 0.00 0.00 0.00 4.00
538 580 1.202758 TGATCAGACGGTTTTGCAGGT 60.203 47.619 0.00 0.00 0.00 4.00
539 581 1.197721 GTGATCAGACGGTTTTGCAGG 59.802 52.381 0.00 0.00 0.00 4.85
540 582 1.872952 TGTGATCAGACGGTTTTGCAG 59.127 47.619 0.00 0.00 0.00 4.41
541 583 1.872952 CTGTGATCAGACGGTTTTGCA 59.127 47.619 0.00 0.00 43.76 4.08
542 584 1.400242 GCTGTGATCAGACGGTTTTGC 60.400 52.381 0.00 0.00 43.76 3.68
543 585 1.136252 CGCTGTGATCAGACGGTTTTG 60.136 52.381 0.00 0.00 43.76 2.44
544 586 1.148310 CGCTGTGATCAGACGGTTTT 58.852 50.000 0.00 0.00 43.76 2.43
545 587 0.317160 TCGCTGTGATCAGACGGTTT 59.683 50.000 0.00 0.00 43.76 3.27
546 588 0.317160 TTCGCTGTGATCAGACGGTT 59.683 50.000 0.00 0.00 43.76 4.44
547 589 0.388649 GTTCGCTGTGATCAGACGGT 60.389 55.000 0.00 0.00 43.76 4.83
548 590 1.406219 CGTTCGCTGTGATCAGACGG 61.406 60.000 0.00 0.00 43.76 4.79
549 591 1.983907 CGTTCGCTGTGATCAGACG 59.016 57.895 0.00 0.00 43.76 4.18
550 592 1.687494 GGCGTTCGCTGTGATCAGAC 61.687 60.000 16.40 0.00 43.76 3.51
551 593 1.446099 GGCGTTCGCTGTGATCAGA 60.446 57.895 16.40 0.00 43.76 3.27
552 594 1.446792 AGGCGTTCGCTGTGATCAG 60.447 57.895 16.40 0.00 43.87 2.90
553 595 1.737735 CAGGCGTTCGCTGTGATCA 60.738 57.895 16.40 0.00 0.00 2.92
554 596 3.084579 CAGGCGTTCGCTGTGATC 58.915 61.111 16.40 0.00 0.00 2.92
555 597 3.121030 GCAGGCGTTCGCTGTGAT 61.121 61.111 16.40 0.00 0.00 3.06
556 598 3.881952 ATGCAGGCGTTCGCTGTGA 62.882 57.895 16.40 6.10 0.00 3.58
557 599 3.425713 ATGCAGGCGTTCGCTGTG 61.426 61.111 16.40 14.38 0.00 3.66
558 600 3.425713 CATGCAGGCGTTCGCTGT 61.426 61.111 16.40 2.30 0.00 4.40
559 601 3.120385 TCATGCAGGCGTTCGCTG 61.120 61.111 16.40 12.98 0.00 5.18
560 602 3.121030 GTCATGCAGGCGTTCGCT 61.121 61.111 16.40 0.74 0.00 4.93
561 603 4.166011 GGTCATGCAGGCGTTCGC 62.166 66.667 8.75 8.75 0.00 4.70
562 604 3.853330 CGGTCATGCAGGCGTTCG 61.853 66.667 0.00 0.00 0.00 3.95
563 605 2.740714 GACGGTCATGCAGGCGTTC 61.741 63.158 5.55 0.00 0.00 3.95
564 606 2.742372 GACGGTCATGCAGGCGTT 60.742 61.111 5.55 0.00 0.00 4.84
565 607 4.760047 GGACGGTCATGCAGGCGT 62.760 66.667 10.76 3.73 0.00 5.68
567 609 3.740128 ATCGGACGGTCATGCAGGC 62.740 63.158 10.76 0.00 0.00 4.85
568 610 1.592669 GATCGGACGGTCATGCAGG 60.593 63.158 10.76 0.00 0.00 4.85
569 611 0.460109 TTGATCGGACGGTCATGCAG 60.460 55.000 8.63 0.00 0.00 4.41
570 612 0.036858 TTTGATCGGACGGTCATGCA 60.037 50.000 8.63 0.00 0.00 3.96
571 613 1.083489 TTTTGATCGGACGGTCATGC 58.917 50.000 8.63 0.00 0.00 4.06
572 614 5.443261 CATAATTTTGATCGGACGGTCATG 58.557 41.667 8.63 0.00 0.00 3.07
573 615 4.024048 GCATAATTTTGATCGGACGGTCAT 60.024 41.667 8.63 0.00 0.00 3.06
574 616 3.311322 GCATAATTTTGATCGGACGGTCA 59.689 43.478 10.76 3.17 0.00 4.02
575 617 3.603857 CGCATAATTTTGATCGGACGGTC 60.604 47.826 0.00 0.00 0.00 4.79
576 618 2.286833 CGCATAATTTTGATCGGACGGT 59.713 45.455 0.00 0.00 0.00 4.83
577 619 2.349438 CCGCATAATTTTGATCGGACGG 60.349 50.000 8.53 3.45 39.23 4.79
578 620 2.349438 CCCGCATAATTTTGATCGGACG 60.349 50.000 13.67 1.89 39.23 4.79
579 621 2.616842 ACCCGCATAATTTTGATCGGAC 59.383 45.455 13.67 0.00 39.23 4.79
580 622 2.616376 CACCCGCATAATTTTGATCGGA 59.384 45.455 13.67 0.00 39.23 4.55
581 623 2.287547 CCACCCGCATAATTTTGATCGG 60.288 50.000 0.00 4.35 36.90 4.18
582 624 2.357637 ACCACCCGCATAATTTTGATCG 59.642 45.455 0.00 0.00 0.00 3.69
583 625 4.819630 TCTACCACCCGCATAATTTTGATC 59.180 41.667 0.00 0.00 0.00 2.92
584 626 4.787551 TCTACCACCCGCATAATTTTGAT 58.212 39.130 0.00 0.00 0.00 2.57
585 627 4.223556 TCTACCACCCGCATAATTTTGA 57.776 40.909 0.00 0.00 0.00 2.69
586 628 5.514274 AATCTACCACCCGCATAATTTTG 57.486 39.130 0.00 0.00 0.00 2.44
587 629 6.538945 AAAATCTACCACCCGCATAATTTT 57.461 33.333 0.00 0.00 0.00 1.82
588 630 6.538945 AAAAATCTACCACCCGCATAATTT 57.461 33.333 0.00 0.00 0.00 1.82
620 662 8.829612 CAGTTTTTGACATAGAAGGCAATTTTT 58.170 29.630 0.00 0.00 0.00 1.94
621 663 7.986889 ACAGTTTTTGACATAGAAGGCAATTTT 59.013 29.630 0.00 0.00 0.00 1.82
622 664 7.500141 ACAGTTTTTGACATAGAAGGCAATTT 58.500 30.769 0.00 0.00 0.00 1.82
623 665 7.054491 ACAGTTTTTGACATAGAAGGCAATT 57.946 32.000 0.00 0.00 0.00 2.32
624 666 6.655078 ACAGTTTTTGACATAGAAGGCAAT 57.345 33.333 0.00 0.00 0.00 3.56
625 667 6.463995 AACAGTTTTTGACATAGAAGGCAA 57.536 33.333 0.00 0.00 0.00 4.52
626 668 7.592938 CATAACAGTTTTTGACATAGAAGGCA 58.407 34.615 0.00 0.00 0.00 4.75
627 669 6.528072 GCATAACAGTTTTTGACATAGAAGGC 59.472 38.462 0.00 0.00 0.00 4.35
628 670 7.820648 AGCATAACAGTTTTTGACATAGAAGG 58.179 34.615 0.00 0.00 0.00 3.46
629 671 8.725148 AGAGCATAACAGTTTTTGACATAGAAG 58.275 33.333 0.00 0.00 0.00 2.85
630 672 8.621532 AGAGCATAACAGTTTTTGACATAGAA 57.378 30.769 0.00 0.00 0.00 2.10
631 673 8.506437 CAAGAGCATAACAGTTTTTGACATAGA 58.494 33.333 0.00 0.00 0.00 1.98
632 674 8.292448 ACAAGAGCATAACAGTTTTTGACATAG 58.708 33.333 0.00 0.00 0.00 2.23
633 675 8.075574 CACAAGAGCATAACAGTTTTTGACATA 58.924 33.333 0.00 0.00 0.00 2.29
634 676 6.919662 CACAAGAGCATAACAGTTTTTGACAT 59.080 34.615 0.00 0.00 0.00 3.06
635 677 6.094742 TCACAAGAGCATAACAGTTTTTGACA 59.905 34.615 0.00 0.00 0.00 3.58
636 678 6.494842 TCACAAGAGCATAACAGTTTTTGAC 58.505 36.000 0.00 0.00 0.00 3.18
637 679 6.691754 TCACAAGAGCATAACAGTTTTTGA 57.308 33.333 0.00 0.00 0.00 2.69
638 680 7.195646 TCTTCACAAGAGCATAACAGTTTTTG 58.804 34.615 0.00 0.00 32.71 2.44
639 681 7.333528 TCTTCACAAGAGCATAACAGTTTTT 57.666 32.000 0.00 0.00 32.71 1.94
640 682 6.942532 TCTTCACAAGAGCATAACAGTTTT 57.057 33.333 0.00 0.00 32.71 2.43
641 683 6.767902 TCTTCTTCACAAGAGCATAACAGTTT 59.232 34.615 0.00 0.00 39.03 2.66
642 684 6.291377 TCTTCTTCACAAGAGCATAACAGTT 58.709 36.000 0.00 0.00 39.03 3.16
643 685 5.858381 TCTTCTTCACAAGAGCATAACAGT 58.142 37.500 0.00 0.00 39.03 3.55
644 686 6.370994 ACATCTTCTTCACAAGAGCATAACAG 59.629 38.462 0.00 0.00 39.03 3.16
645 687 6.233434 ACATCTTCTTCACAAGAGCATAACA 58.767 36.000 0.00 0.00 39.03 2.41
646 688 6.369890 TGACATCTTCTTCACAAGAGCATAAC 59.630 38.462 0.00 0.00 39.03 1.89
647 689 6.466812 TGACATCTTCTTCACAAGAGCATAA 58.533 36.000 0.00 0.00 39.03 1.90
648 690 6.041423 TGACATCTTCTTCACAAGAGCATA 57.959 37.500 0.00 0.00 39.03 3.14
649 691 4.903054 TGACATCTTCTTCACAAGAGCAT 58.097 39.130 0.00 0.00 39.03 3.79
650 692 4.341366 TGACATCTTCTTCACAAGAGCA 57.659 40.909 0.00 0.00 39.03 4.26
651 693 4.437121 GCATGACATCTTCTTCACAAGAGC 60.437 45.833 0.00 0.00 39.03 4.09
652 694 4.094590 GGCATGACATCTTCTTCACAAGAG 59.905 45.833 0.00 0.00 39.03 2.85
653 695 4.005650 GGCATGACATCTTCTTCACAAGA 58.994 43.478 0.00 0.00 36.82 3.02
654 696 3.128242 GGGCATGACATCTTCTTCACAAG 59.872 47.826 0.00 0.00 0.00 3.16
655 697 3.084039 GGGCATGACATCTTCTTCACAA 58.916 45.455 0.00 0.00 0.00 3.33
656 698 2.306805 AGGGCATGACATCTTCTTCACA 59.693 45.455 0.00 0.00 0.00 3.58
657 699 2.996631 AGGGCATGACATCTTCTTCAC 58.003 47.619 0.00 0.00 0.00 3.18
658 700 4.225942 AGTTAGGGCATGACATCTTCTTCA 59.774 41.667 0.00 0.00 0.00 3.02
659 701 4.775236 AGTTAGGGCATGACATCTTCTTC 58.225 43.478 0.00 0.00 0.00 2.87
660 702 4.851639 AGTTAGGGCATGACATCTTCTT 57.148 40.909 0.00 0.00 0.00 2.52
661 703 5.957771 TTAGTTAGGGCATGACATCTTCT 57.042 39.130 0.00 0.00 0.00 2.85
662 704 7.573968 ATTTTAGTTAGGGCATGACATCTTC 57.426 36.000 0.00 0.00 0.00 2.87
663 705 7.397192 ACAATTTTAGTTAGGGCATGACATCTT 59.603 33.333 0.00 0.00 0.00 2.40
664 706 6.891908 ACAATTTTAGTTAGGGCATGACATCT 59.108 34.615 0.00 0.00 0.00 2.90
665 707 7.100458 ACAATTTTAGTTAGGGCATGACATC 57.900 36.000 0.00 0.00 0.00 3.06
666 708 6.663093 TGACAATTTTAGTTAGGGCATGACAT 59.337 34.615 0.00 0.00 0.00 3.06
667 709 6.007076 TGACAATTTTAGTTAGGGCATGACA 58.993 36.000 0.00 0.00 0.00 3.58
668 710 6.374333 TCTGACAATTTTAGTTAGGGCATGAC 59.626 38.462 0.00 0.00 0.00 3.06
669 711 6.480763 TCTGACAATTTTAGTTAGGGCATGA 58.519 36.000 0.00 0.00 0.00 3.07
670 712 6.757897 TCTGACAATTTTAGTTAGGGCATG 57.242 37.500 0.00 0.00 0.00 4.06
671 713 7.669722 TCTTTCTGACAATTTTAGTTAGGGCAT 59.330 33.333 0.00 0.00 0.00 4.40
672 714 7.001674 TCTTTCTGACAATTTTAGTTAGGGCA 58.998 34.615 0.00 0.00 0.00 5.36
673 715 7.306213 GTCTTTCTGACAATTTTAGTTAGGGC 58.694 38.462 0.00 0.00 44.73 5.19
687 729 7.716057 GGCATTTGCGAAAGTCTTTCTGACA 62.716 44.000 20.39 13.73 44.33 3.58
688 730 3.665871 GCATTTGCGAAAGTCTTTCTGAC 59.334 43.478 20.39 11.69 45.67 3.51
689 731 3.304659 GGCATTTGCGAAAGTCTTTCTGA 60.305 43.478 20.39 6.44 43.26 3.27
690 732 2.982470 GGCATTTGCGAAAGTCTTTCTG 59.018 45.455 20.39 15.18 43.26 3.02
691 733 2.622942 TGGCATTTGCGAAAGTCTTTCT 59.377 40.909 20.39 1.58 43.26 2.52
692 734 2.726241 GTGGCATTTGCGAAAGTCTTTC 59.274 45.455 14.35 14.35 43.26 2.62
693 735 2.545742 GGTGGCATTTGCGAAAGTCTTT 60.546 45.455 0.00 0.00 43.26 2.52
694 736 1.000274 GGTGGCATTTGCGAAAGTCTT 60.000 47.619 0.00 0.00 43.26 3.01
695 737 0.598065 GGTGGCATTTGCGAAAGTCT 59.402 50.000 0.00 0.00 43.26 3.24
696 738 0.313672 TGGTGGCATTTGCGAAAGTC 59.686 50.000 0.00 0.00 43.26 3.01
697 739 0.968405 ATGGTGGCATTTGCGAAAGT 59.032 45.000 0.00 0.00 43.26 2.66
698 740 2.083167 AATGGTGGCATTTGCGAAAG 57.917 45.000 0.00 0.00 43.26 2.62
699 741 2.036992 AGAAATGGTGGCATTTGCGAAA 59.963 40.909 0.00 0.00 43.26 3.46
700 742 1.617850 AGAAATGGTGGCATTTGCGAA 59.382 42.857 0.00 0.00 43.26 4.70
701 743 1.255882 AGAAATGGTGGCATTTGCGA 58.744 45.000 0.00 0.00 43.26 5.10
702 744 1.727880 CAAGAAATGGTGGCATTTGCG 59.272 47.619 0.00 0.00 43.26 4.85
703 745 2.078392 CCAAGAAATGGTGGCATTTGC 58.922 47.619 0.00 0.00 44.85 3.68
714 756 0.109132 GGAACGCTGGCCAAGAAATG 60.109 55.000 7.01 0.00 0.00 2.32
715 757 0.251341 AGGAACGCTGGCCAAGAAAT 60.251 50.000 7.01 0.00 0.00 2.17
716 758 0.889186 GAGGAACGCTGGCCAAGAAA 60.889 55.000 7.01 0.00 0.00 2.52
717 759 1.302511 GAGGAACGCTGGCCAAGAA 60.303 57.895 7.01 0.00 0.00 2.52
718 760 2.347490 GAGGAACGCTGGCCAAGA 59.653 61.111 7.01 0.00 0.00 3.02
719 761 3.121030 CGAGGAACGCTGGCCAAG 61.121 66.667 7.01 6.62 34.51 3.61
720 762 4.697756 CCGAGGAACGCTGGCCAA 62.698 66.667 7.01 0.00 41.07 4.52
722 764 2.100879 ATATCCGAGGAACGCTGGCC 62.101 60.000 0.00 0.00 41.07 5.36
723 765 0.667792 GATATCCGAGGAACGCTGGC 60.668 60.000 0.00 0.00 41.07 4.85
724 766 0.387367 CGATATCCGAGGAACGCTGG 60.387 60.000 0.00 0.00 41.76 4.85
725 767 1.004277 GCGATATCCGAGGAACGCTG 61.004 60.000 23.18 6.13 41.76 5.18
726 768 1.286260 GCGATATCCGAGGAACGCT 59.714 57.895 23.18 2.39 41.76 5.07
727 769 2.081212 CGCGATATCCGAGGAACGC 61.081 63.158 21.74 21.74 41.76 4.84
728 770 4.132426 CGCGATATCCGAGGAACG 57.868 61.111 0.00 4.38 41.76 3.95
733 775 2.065993 AATGAACCGCGATATCCGAG 57.934 50.000 8.23 3.94 41.76 4.63
734 776 2.131972 CAAATGAACCGCGATATCCGA 58.868 47.619 8.23 0.00 41.76 4.55
735 777 2.096909 GTCAAATGAACCGCGATATCCG 60.097 50.000 8.23 2.05 42.21 4.18
736 778 2.869801 TGTCAAATGAACCGCGATATCC 59.130 45.455 8.23 0.00 0.00 2.59
737 779 4.530094 TTGTCAAATGAACCGCGATATC 57.470 40.909 8.23 2.86 0.00 1.63
738 780 4.730613 GCTTTGTCAAATGAACCGCGATAT 60.731 41.667 8.23 0.00 0.00 1.63
739 781 3.425625 GCTTTGTCAAATGAACCGCGATA 60.426 43.478 8.23 0.00 0.00 2.92
740 782 2.668279 GCTTTGTCAAATGAACCGCGAT 60.668 45.455 8.23 0.00 0.00 4.58
741 783 1.334599 GCTTTGTCAAATGAACCGCGA 60.335 47.619 8.23 0.00 0.00 5.87
742 784 1.052287 GCTTTGTCAAATGAACCGCG 58.948 50.000 0.00 0.00 0.00 6.46
743 785 2.132740 TGCTTTGTCAAATGAACCGC 57.867 45.000 0.00 0.00 0.00 5.68
744 786 5.218885 TGTATTGCTTTGTCAAATGAACCG 58.781 37.500 0.00 0.00 0.00 4.44
745 787 6.215845 ACTGTATTGCTTTGTCAAATGAACC 58.784 36.000 0.00 0.00 0.00 3.62
746 788 8.795786 TTACTGTATTGCTTTGTCAAATGAAC 57.204 30.769 0.00 0.00 0.00 3.18
747 789 9.462174 CTTTACTGTATTGCTTTGTCAAATGAA 57.538 29.630 0.00 0.00 0.00 2.57
748 790 8.629158 ACTTTACTGTATTGCTTTGTCAAATGA 58.371 29.630 0.00 0.00 0.00 2.57
749 791 8.801715 ACTTTACTGTATTGCTTTGTCAAATG 57.198 30.769 0.00 0.00 0.00 2.32
750 792 7.803189 CGACTTTACTGTATTGCTTTGTCAAAT 59.197 33.333 0.00 0.00 0.00 2.32
751 793 7.129622 CGACTTTACTGTATTGCTTTGTCAAA 58.870 34.615 0.00 0.00 0.00 2.69
752 794 6.293190 CCGACTTTACTGTATTGCTTTGTCAA 60.293 38.462 0.00 0.00 0.00 3.18
753 795 5.178623 CCGACTTTACTGTATTGCTTTGTCA 59.821 40.000 0.00 0.00 0.00 3.58
754 796 5.390567 CCCGACTTTACTGTATTGCTTTGTC 60.391 44.000 0.00 0.00 0.00 3.18
755 797 4.454504 CCCGACTTTACTGTATTGCTTTGT 59.545 41.667 0.00 0.00 0.00 2.83
756 798 4.454504 ACCCGACTTTACTGTATTGCTTTG 59.545 41.667 0.00 0.00 0.00 2.77
757 799 4.648651 ACCCGACTTTACTGTATTGCTTT 58.351 39.130 0.00 0.00 0.00 3.51
758 800 4.281898 ACCCGACTTTACTGTATTGCTT 57.718 40.909 0.00 0.00 0.00 3.91
759 801 3.975168 ACCCGACTTTACTGTATTGCT 57.025 42.857 0.00 0.00 0.00 3.91
760 802 5.870978 TCTTAACCCGACTTTACTGTATTGC 59.129 40.000 0.00 0.00 0.00 3.56
761 803 6.035758 GCTCTTAACCCGACTTTACTGTATTG 59.964 42.308 0.00 0.00 0.00 1.90
762 804 6.104665 GCTCTTAACCCGACTTTACTGTATT 58.895 40.000 0.00 0.00 0.00 1.89
763 805 5.658468 GCTCTTAACCCGACTTTACTGTAT 58.342 41.667 0.00 0.00 0.00 2.29
764 806 4.379813 CGCTCTTAACCCGACTTTACTGTA 60.380 45.833 0.00 0.00 0.00 2.74
765 807 3.613432 CGCTCTTAACCCGACTTTACTGT 60.613 47.826 0.00 0.00 0.00 3.55
766 808 2.921754 CGCTCTTAACCCGACTTTACTG 59.078 50.000 0.00 0.00 0.00 2.74
767 809 2.673326 GCGCTCTTAACCCGACTTTACT 60.673 50.000 0.00 0.00 0.00 2.24
768 810 1.657594 GCGCTCTTAACCCGACTTTAC 59.342 52.381 0.00 0.00 0.00 2.01
769 811 1.547372 AGCGCTCTTAACCCGACTTTA 59.453 47.619 2.64 0.00 0.00 1.85
770 812 0.320697 AGCGCTCTTAACCCGACTTT 59.679 50.000 2.64 0.00 0.00 2.66
771 813 0.389948 CAGCGCTCTTAACCCGACTT 60.390 55.000 7.13 0.00 0.00 3.01
772 814 1.215647 CAGCGCTCTTAACCCGACT 59.784 57.895 7.13 0.00 0.00 4.18
773 815 2.453638 GCAGCGCTCTTAACCCGAC 61.454 63.158 7.13 0.00 0.00 4.79
774 816 2.125673 GCAGCGCTCTTAACCCGA 60.126 61.111 7.13 0.00 0.00 5.14
775 817 3.554692 CGCAGCGCTCTTAACCCG 61.555 66.667 7.13 0.00 0.00 5.28
776 818 2.125673 TCGCAGCGCTCTTAACCC 60.126 61.111 7.13 0.00 0.00 4.11
777 819 1.289109 TTGTCGCAGCGCTCTTAACC 61.289 55.000 7.13 0.00 0.00 2.85
778 820 0.721718 ATTGTCGCAGCGCTCTTAAC 59.278 50.000 7.13 4.20 0.00 2.01
779 821 1.128507 CAATTGTCGCAGCGCTCTTAA 59.871 47.619 7.13 0.00 0.00 1.85
780 822 0.721154 CAATTGTCGCAGCGCTCTTA 59.279 50.000 7.13 0.00 0.00 2.10
781 823 1.230635 ACAATTGTCGCAGCGCTCTT 61.231 50.000 7.13 0.00 0.00 2.85
782 824 1.230635 AACAATTGTCGCAGCGCTCT 61.231 50.000 7.13 0.00 0.00 4.09
783 825 0.442310 TAACAATTGTCGCAGCGCTC 59.558 50.000 7.13 6.39 0.00 5.03
784 826 0.443869 CTAACAATTGTCGCAGCGCT 59.556 50.000 12.39 2.64 0.00 5.92
785 827 0.165944 ACTAACAATTGTCGCAGCGC 59.834 50.000 12.39 0.00 0.00 5.92
786 828 2.594529 AACTAACAATTGTCGCAGCG 57.405 45.000 12.39 9.06 0.00 5.18
787 829 3.234386 GGAAACTAACAATTGTCGCAGC 58.766 45.455 12.39 0.48 0.00 5.25
788 830 3.059188 ACGGAAACTAACAATTGTCGCAG 60.059 43.478 12.39 11.72 0.00 5.18
789 831 2.873472 ACGGAAACTAACAATTGTCGCA 59.127 40.909 12.39 0.00 0.00 5.10
790 832 3.223157 CACGGAAACTAACAATTGTCGC 58.777 45.455 12.39 0.00 0.00 5.19
791 833 3.223157 GCACGGAAACTAACAATTGTCG 58.777 45.455 12.39 11.46 0.00 4.35
792 834 3.561503 GGCACGGAAACTAACAATTGTC 58.438 45.455 12.39 0.00 0.00 3.18
793 835 2.295070 GGGCACGGAAACTAACAATTGT 59.705 45.455 4.92 4.92 0.00 2.71
794 836 2.556622 AGGGCACGGAAACTAACAATTG 59.443 45.455 3.24 3.24 0.00 2.32
795 837 2.871453 AGGGCACGGAAACTAACAATT 58.129 42.857 0.00 0.00 0.00 2.32
796 838 2.579410 AGGGCACGGAAACTAACAAT 57.421 45.000 0.00 0.00 0.00 2.71
797 839 2.633967 TCTAGGGCACGGAAACTAACAA 59.366 45.455 0.00 0.00 0.00 2.83
798 840 2.232941 CTCTAGGGCACGGAAACTAACA 59.767 50.000 0.00 0.00 0.00 2.41
799 841 2.889852 CTCTAGGGCACGGAAACTAAC 58.110 52.381 0.00 0.00 0.00 2.34
800 842 1.206371 GCTCTAGGGCACGGAAACTAA 59.794 52.381 10.54 0.00 0.00 2.24
801 843 0.822164 GCTCTAGGGCACGGAAACTA 59.178 55.000 10.54 0.00 0.00 2.24
802 844 0.905337 AGCTCTAGGGCACGGAAACT 60.905 55.000 18.89 0.00 34.17 2.66
803 845 0.741221 CAGCTCTAGGGCACGGAAAC 60.741 60.000 18.89 0.00 34.17 2.78
804 846 1.192146 ACAGCTCTAGGGCACGGAAA 61.192 55.000 18.89 0.00 34.17 3.13
805 847 1.609501 ACAGCTCTAGGGCACGGAA 60.610 57.895 18.89 0.00 34.17 4.30
806 848 2.037367 ACAGCTCTAGGGCACGGA 59.963 61.111 18.89 0.00 34.17 4.69
807 849 2.185350 CACAGCTCTAGGGCACGG 59.815 66.667 18.89 8.41 34.17 4.94
808 850 1.140589 CTCACAGCTCTAGGGCACG 59.859 63.158 18.89 10.08 34.17 5.34
809 851 1.153469 GCTCACAGCTCTAGGGCAC 60.153 63.158 18.89 0.00 38.45 5.01
810 852 1.610379 TGCTCACAGCTCTAGGGCA 60.610 57.895 18.89 0.21 42.97 5.36
811 853 1.143620 CTGCTCACAGCTCTAGGGC 59.856 63.158 6.45 6.45 42.97 5.19
821 863 0.320421 GGAGTTAACCGCTGCTCACA 60.320 55.000 0.88 0.00 0.00 3.58
822 864 1.019805 GGGAGTTAACCGCTGCTCAC 61.020 60.000 0.88 0.00 0.00 3.51
823 865 1.295423 GGGAGTTAACCGCTGCTCA 59.705 57.895 0.88 0.00 0.00 4.26
824 866 1.810030 CGGGAGTTAACCGCTGCTC 60.810 63.158 0.88 0.00 45.34 4.26
825 867 2.264794 CGGGAGTTAACCGCTGCT 59.735 61.111 0.88 0.00 45.34 4.24
831 873 0.958876 CAAGGCCACGGGAGTTAACC 60.959 60.000 5.01 0.00 44.67 2.85
832 874 0.958876 CCAAGGCCACGGGAGTTAAC 60.959 60.000 5.01 0.00 44.67 2.01
833 875 1.377229 CCAAGGCCACGGGAGTTAA 59.623 57.895 5.01 0.00 44.67 2.01
834 876 0.544833 TACCAAGGCCACGGGAGTTA 60.545 55.000 14.49 0.00 44.67 2.24
835 877 1.838073 CTACCAAGGCCACGGGAGTT 61.838 60.000 13.53 0.00 44.67 3.01
837 879 2.240162 GACTACCAAGGCCACGGGAG 62.240 65.000 18.95 18.95 39.39 4.30
838 880 2.203877 ACTACCAAGGCCACGGGA 60.204 61.111 14.49 5.32 0.00 5.14
839 881 2.267961 GACTACCAAGGCCACGGG 59.732 66.667 14.49 10.26 0.00 5.28
840 882 2.125673 CGACTACCAAGGCCACGG 60.126 66.667 5.01 7.32 0.00 4.94
841 883 2.125673 CCGACTACCAAGGCCACG 60.126 66.667 5.01 0.00 0.00 4.94
842 884 2.436115 GCCGACTACCAAGGCCAC 60.436 66.667 5.01 0.00 44.80 5.01
851 893 1.183549 TTTGAGAGGGAGCCGACTAC 58.816 55.000 0.00 0.00 0.00 2.73
852 894 2.160721 ATTTGAGAGGGAGCCGACTA 57.839 50.000 0.00 0.00 0.00 2.59
853 895 1.280457 AATTTGAGAGGGAGCCGACT 58.720 50.000 0.00 0.00 0.00 4.18
854 896 2.115343 AAATTTGAGAGGGAGCCGAC 57.885 50.000 0.00 0.00 0.00 4.79
855 897 2.879103 AAAATTTGAGAGGGAGCCGA 57.121 45.000 0.00 0.00 0.00 5.54
872 914 3.867549 GCTAGGGCGTAGGGAAAAA 57.132 52.632 15.37 0.00 0.00 1.94
922 965 0.898789 TGAAGGGACTCAGGGACGAC 60.899 60.000 0.00 0.00 38.49 4.34
926 969 1.229529 GGGTGAAGGGACTCAGGGA 60.230 63.158 0.00 0.00 38.49 4.20
979 1022 2.589442 GACGTGGTTGGGCGTTGA 60.589 61.111 0.00 0.00 41.70 3.18
1175 1219 2.253610 TCTTGTCGGTGTGAACCCTAT 58.746 47.619 0.00 0.00 0.00 2.57
1207 1251 2.565391 TCATGTCCTTGTAGAAAGCCGA 59.435 45.455 0.00 0.00 0.00 5.54
1266 1310 0.033796 ATCTGTTAGGTCCGACCGGA 60.034 55.000 9.46 7.11 44.90 5.14
1352 1396 1.167851 CATCAGAACCGCCATGTTGT 58.832 50.000 0.00 0.00 0.00 3.32
1539 1584 4.240323 CCCTAACCCTAACATAGTCCCAT 58.760 47.826 0.00 0.00 0.00 4.00
1540 1585 3.014342 ACCCTAACCCTAACATAGTCCCA 59.986 47.826 0.00 0.00 0.00 4.37
1568 1613 4.253685 TGTAAGAGGCTGCTTAATGTCAC 58.746 43.478 0.00 0.00 32.58 3.67
1682 1728 2.740981 CACTCTTTGTGCTCATGACCTC 59.259 50.000 0.00 0.00 40.06 3.85
1698 1744 1.270907 GGACACCAGATCCACACTCT 58.729 55.000 0.00 0.00 36.15 3.24
1716 1762 8.404000 CCAAACTTGAGATTCTTCTTATCATGG 58.596 37.037 0.00 0.00 30.30 3.66
1819 1865 0.249398 GGGCTGCCGTTCTTCTTCTA 59.751 55.000 13.40 0.00 0.00 2.10
1927 1974 4.689812 CCTCGCATCTCTATCAATTTCCAG 59.310 45.833 0.00 0.00 0.00 3.86
1959 2006 0.911769 CTCCAGCCCTGTCCATGTTA 59.088 55.000 0.00 0.00 0.00 2.41
1971 2018 0.179702 TCACAGCATCATCTCCAGCC 59.820 55.000 0.00 0.00 0.00 4.85
2050 2097 1.066573 CGTTGGTGAGGCATTCTCTCT 60.067 52.381 0.00 0.00 42.86 3.10
2085 2132 7.040478 TCCTTAGTAAGCTTGACACGTTTACTA 60.040 37.037 18.37 18.37 38.66 1.82
2106 2153 4.492646 TCTCCATGGTAGCATGATCCTTA 58.507 43.478 31.40 11.13 34.66 2.69
2123 2170 1.449601 GAAGCCGCCGATTTCTCCA 60.450 57.895 0.00 0.00 0.00 3.86
2177 2224 2.203422 CCCCGGCAGTTCCAAACA 60.203 61.111 0.00 0.00 34.01 2.83
2230 2641 2.038426 GCTTGGGGTTATTGGCTTTTGT 59.962 45.455 0.00 0.00 0.00 2.83
2298 2709 2.343163 GACCGAGTCTCCATCGCAGG 62.343 65.000 0.00 0.00 38.84 4.85
2401 2814 6.740905 TCGATAAAACGATTGCAAGAATCAAC 59.259 34.615 4.94 0.00 37.37 3.18
2424 2837 2.193447 CCATCGACCACACTAACATCG 58.807 52.381 0.00 0.00 0.00 3.84
2464 2877 1.985159 ACCATAGACAAAGGTGCCTCA 59.015 47.619 0.00 0.00 33.57 3.86
2484 2897 1.073125 TGATTTTCAACCCGAGGCTCA 59.927 47.619 15.95 0.00 0.00 4.26
2504 2917 0.816825 GTGCTCCCACATGCGATGAT 60.817 55.000 0.00 0.00 41.67 2.45
2554 2967 2.747022 CCCACACACCATCCACGA 59.253 61.111 0.00 0.00 0.00 4.35
2571 2984 5.663456 TGCCATAAAGCTTCATTGAAATCC 58.337 37.500 0.00 0.00 0.00 3.01
2589 3002 1.136305 GACAAATGCTCATGCTGCCAT 59.864 47.619 0.00 0.00 40.48 4.40
2730 3183 0.602638 AGCGAACCTGAACATTGCGA 60.603 50.000 0.00 0.00 0.00 5.10
2745 3198 1.570813 CATAAGCACGATCCAAGCGA 58.429 50.000 0.00 0.00 0.00 4.93
2762 3215 2.436646 CCAAAGCCTCGTCCGCAT 60.437 61.111 0.00 0.00 0.00 4.73
2766 3219 3.423154 CACGCCAAAGCCTCGTCC 61.423 66.667 0.00 0.00 33.84 4.79
2772 3225 2.479560 GGAAATGTATCACGCCAAAGCC 60.480 50.000 0.00 0.00 34.57 4.35
2777 3230 2.389386 GCGGAAATGTATCACGCCA 58.611 52.632 0.00 0.00 44.01 5.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.