Multiple sequence alignment - TraesCS7B01G358700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G358700 chr7B 100.000 3354 0 0 1 3354 620656613 620659966 0.000000e+00 6194
1 TraesCS7B01G358700 chr7B 93.354 316 20 1 1 316 557312279 557311965 1.820000e-127 466
2 TraesCS7B01G358700 chr7B 96.023 176 6 1 2756 2931 678620613 678620787 5.480000e-73 285
3 TraesCS7B01G358700 chr7D 86.612 1225 89 35 1 1202 566554940 566553768 0.000000e+00 1284
4 TraesCS7B01G358700 chr7D 90.936 673 56 5 2023 2691 566553204 566552533 0.000000e+00 900
5 TraesCS7B01G358700 chr7D 83.832 167 18 6 3193 3354 566552183 566552021 2.080000e-32 150
6 TraesCS7B01G358700 chr7A 86.282 1232 105 35 5 1206 652725516 652724319 0.000000e+00 1280
7 TraesCS7B01G358700 chr7A 85.106 799 72 23 1950 2743 652723272 652722516 0.000000e+00 773
8 TraesCS7B01G358700 chr7A 97.633 169 3 1 2756 2923 426576435 426576603 4.230000e-74 289
9 TraesCS7B01G358700 chr7A 85.417 192 20 5 1754 1938 652723504 652723314 3.420000e-45 193
10 TraesCS7B01G358700 chr7A 85.185 162 13 9 3193 3354 652722152 652722002 4.480000e-34 156
11 TraesCS7B01G358700 chr6B 93.354 316 20 1 1 316 62860862 62861176 1.820000e-127 466
12 TraesCS7B01G358700 chr6B 93.354 316 20 1 1 316 152621254 152621568 1.820000e-127 466
13 TraesCS7B01G358700 chr6B 93.354 316 20 1 1 316 452991656 452991342 1.820000e-127 466
14 TraesCS7B01G358700 chr2B 93.354 316 20 1 1 316 680530514 680530828 1.820000e-127 466
15 TraesCS7B01G358700 chr2B 98.182 165 2 1 2756 2920 314771408 314771571 1.520000e-73 287
16 TraesCS7B01G358700 chrUn 93.038 316 21 1 1 316 350920415 350920101 8.480000e-126 460
17 TraesCS7B01G358700 chr5B 93.038 316 21 1 1 316 337799849 337799535 8.480000e-126 460
18 TraesCS7B01G358700 chr5B 93.038 316 21 1 1 316 507515520 507515834 8.480000e-126 460
19 TraesCS7B01G358700 chr1B 93.038 316 21 1 1 316 24583854 24584168 8.480000e-126 460
20 TraesCS7B01G358700 chr5D 98.182 165 3 0 2756 2920 319691576 319691412 4.230000e-74 289
21 TraesCS7B01G358700 chr3B 98.182 165 1 2 2756 2920 106897749 106897587 1.520000e-73 287
22 TraesCS7B01G358700 chr4A 96.552 174 3 3 2756 2928 231287809 231287638 5.480000e-73 285
23 TraesCS7B01G358700 chr4A 98.148 162 1 2 2756 2917 479322829 479322988 7.090000e-72 281
24 TraesCS7B01G358700 chr1A 97.605 167 2 2 2756 2922 276573442 276573278 5.480000e-73 285
25 TraesCS7B01G358700 chr3A 95.977 174 4 3 2756 2929 33589110 33588940 2.550000e-71 279


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G358700 chr7B 620656613 620659966 3353 False 6194.0 6194 100.000000 1 3354 1 chr7B.!!$F1 3353
1 TraesCS7B01G358700 chr7D 566552021 566554940 2919 True 778.0 1284 87.126667 1 3354 3 chr7D.!!$R1 3353
2 TraesCS7B01G358700 chr7A 652722002 652725516 3514 True 600.5 1280 85.497500 5 3354 4 chr7A.!!$R1 3349

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
204 206 0.179034 CCTATCCCAGGCTGAGCAAC 60.179 60.0 17.94 0.0 37.70 4.17 F
1398 1520 0.036164 ACACACCATGCTTCCGCTTA 59.964 50.0 0.00 0.0 36.97 3.09 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1913 2300 0.034756 TACAGCGCATGTTCACTGGT 59.965 50.0 11.47 0.0 39.96 4.0 R
2752 3283 0.036164 ACTTCACCACTGCGCCATAA 59.964 50.0 4.18 0.0 0.00 1.9 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 33 2.218066 GGGGAATCCCGCAGTTCTA 58.782 57.895 12.94 0.00 46.66 2.10
36 38 1.666189 GAATCCCGCAGTTCTAGTTGC 59.334 52.381 6.58 6.58 36.97 4.17
39 41 1.897133 TCCCGCAGTTCTAGTTGCTTA 59.103 47.619 12.38 0.00 38.16 3.09
40 42 2.500098 TCCCGCAGTTCTAGTTGCTTAT 59.500 45.455 12.38 0.00 38.16 1.73
74 76 8.325787 TGAAACTTATTAAGCATTCCACCTAGA 58.674 33.333 14.89 0.00 30.70 2.43
111 113 4.152402 ACAACCGAACTGAATCTTCAATCG 59.848 41.667 15.45 15.45 41.93 3.34
136 138 0.329596 ATTGCACCTTCCCTGGAGAC 59.670 55.000 0.00 0.00 0.00 3.36
170 172 4.134563 TCTGTTTTACCACCTCAGAAAGC 58.865 43.478 0.00 0.00 33.18 3.51
176 178 0.671781 CCACCTCAGAAAGCTCACGG 60.672 60.000 0.00 0.00 0.00 4.94
204 206 0.179034 CCTATCCCAGGCTGAGCAAC 60.179 60.000 17.94 0.00 37.70 4.17
213 215 2.225019 CAGGCTGAGCAACTAACACAAG 59.775 50.000 9.42 0.00 0.00 3.16
215 217 1.876156 GCTGAGCAACTAACACAAGCT 59.124 47.619 0.00 0.00 38.43 3.74
218 220 3.808728 TGAGCAACTAACACAAGCTTCT 58.191 40.909 0.00 0.00 35.36 2.85
249 251 4.466726 ACCGCTAGAAAGTAGAAACATCCT 59.533 41.667 0.00 0.00 0.00 3.24
283 285 8.633075 TGAAAAGATAGCACAGTTTCAAAAAG 57.367 30.769 0.00 0.00 35.77 2.27
304 307 7.971004 AAAGAAAAGAAACGAAAAGTAGCAG 57.029 32.000 0.00 0.00 0.00 4.24
331 334 3.711190 TCTGATTATGCAGACCCTAAGCA 59.289 43.478 0.00 0.00 39.84 3.91
338 346 1.523758 CAGACCCTAAGCACGCTTTT 58.476 50.000 9.96 0.00 37.47 2.27
341 349 3.689649 CAGACCCTAAGCACGCTTTTTAT 59.310 43.478 9.96 0.00 37.47 1.40
342 350 4.156008 CAGACCCTAAGCACGCTTTTTATT 59.844 41.667 9.96 0.00 37.47 1.40
343 351 4.156008 AGACCCTAAGCACGCTTTTTATTG 59.844 41.667 9.96 0.00 37.47 1.90
344 352 3.824443 ACCCTAAGCACGCTTTTTATTGT 59.176 39.130 9.96 0.00 37.47 2.71
345 353 5.005094 ACCCTAAGCACGCTTTTTATTGTA 58.995 37.500 9.96 0.00 37.47 2.41
387 395 3.118847 ACCATGACTGACAGCACATAGAG 60.119 47.826 13.06 9.10 0.00 2.43
405 420 8.627403 CACATAGAGCACATGATTTAAGGAAAT 58.373 33.333 0.00 0.00 38.00 2.17
564 579 1.228124 CGCCTGTCAAACCCTTGGA 60.228 57.895 0.00 0.00 33.01 3.53
566 581 1.408969 GCCTGTCAAACCCTTGGAAA 58.591 50.000 0.00 0.00 33.01 3.13
656 676 2.270527 GTCAGGGGAGGAGCAAGC 59.729 66.667 0.00 0.00 0.00 4.01
661 681 2.606587 GGGGAGGAGCAAGCAGGAA 61.607 63.158 0.00 0.00 0.00 3.36
665 685 3.435186 GGAGCAAGCAGGAACCGC 61.435 66.667 0.00 0.00 0.00 5.68
753 778 1.152312 GGGGAATCGGGAGCTAGGA 60.152 63.158 0.00 0.00 0.00 2.94
754 779 1.188871 GGGGAATCGGGAGCTAGGAG 61.189 65.000 0.00 0.00 0.00 3.69
755 780 1.188871 GGGAATCGGGAGCTAGGAGG 61.189 65.000 0.00 0.00 0.00 4.30
766 791 4.541648 TAGGAGGGAGGCGGCTCC 62.542 72.222 41.96 41.96 42.62 4.70
804 841 0.666374 AAAGAAAACGGTTCGGCCTG 59.334 50.000 0.00 0.00 34.25 4.85
816 853 3.011517 GGCCTGCTCCCTCCTTCA 61.012 66.667 0.00 0.00 0.00 3.02
933 978 1.075970 AGCTCGCTACCTCCATCCA 60.076 57.895 0.00 0.00 0.00 3.41
934 979 1.068250 GCTCGCTACCTCCATCCAC 59.932 63.158 0.00 0.00 0.00 4.02
939 984 2.766651 TACCTCCATCCACCGCCC 60.767 66.667 0.00 0.00 0.00 6.13
953 998 4.729856 GCCCGTTCGTACGCAGGT 62.730 66.667 11.24 0.00 46.27 4.00
1062 1107 1.012486 CCGTCGCCAAGTTAGTCACC 61.012 60.000 0.00 0.00 0.00 4.02
1082 1127 4.847444 GCTCTCCCTTCCCTGCGC 62.847 72.222 0.00 0.00 0.00 6.09
1097 1142 1.112315 TGCGCCCAACCTTGTGATTT 61.112 50.000 4.18 0.00 0.00 2.17
1099 1144 1.540146 GCGCCCAACCTTGTGATTTTT 60.540 47.619 0.00 0.00 0.00 1.94
1131 1179 2.474816 GGTCAAGATCGATGTAGTGCC 58.525 52.381 0.54 0.00 0.00 5.01
1141 1189 2.317040 GATGTAGTGCCTGCCTAGGTA 58.683 52.381 11.31 4.69 46.41 3.08
1146 1194 1.004230 TGCCTGCCTAGGTATGGGT 59.996 57.895 11.31 0.00 46.41 4.51
1157 1205 4.841861 TATGGGTTTCGCGGGCGG 62.842 66.667 13.60 0.00 40.25 6.13
1183 1231 1.880027 AGGTGTTCGTTGAAATGCTCC 59.120 47.619 0.00 0.00 0.00 4.70
1203 1251 2.075355 AACGCCAGGAATTCCCCACA 62.075 55.000 21.22 0.00 36.42 4.17
1213 1294 2.507110 ATTCCCCACACGCGTCAGAG 62.507 60.000 9.86 0.00 0.00 3.35
1223 1304 1.954146 GCGTCAGAGTGGCACGAAA 60.954 57.895 12.71 0.00 35.49 3.46
1224 1305 1.291877 GCGTCAGAGTGGCACGAAAT 61.292 55.000 12.71 0.00 35.49 2.17
1225 1306 1.990799 CGTCAGAGTGGCACGAAATA 58.009 50.000 12.71 0.00 35.49 1.40
1226 1307 1.654105 CGTCAGAGTGGCACGAAATAC 59.346 52.381 12.71 7.45 35.49 1.89
1228 1309 0.370273 CAGAGTGGCACGAAATACGC 59.630 55.000 12.71 0.00 46.94 4.42
1229 1310 0.037697 AGAGTGGCACGAAATACGCA 60.038 50.000 12.71 0.00 46.94 5.24
1230 1311 1.006832 GAGTGGCACGAAATACGCAT 58.993 50.000 12.71 0.00 46.94 4.73
1231 1312 1.396996 GAGTGGCACGAAATACGCATT 59.603 47.619 12.71 0.00 46.94 3.56
1232 1313 2.605818 GAGTGGCACGAAATACGCATTA 59.394 45.455 12.71 0.00 46.94 1.90
1233 1314 3.202906 AGTGGCACGAAATACGCATTAT 58.797 40.909 12.71 0.00 46.94 1.28
1234 1315 3.002246 AGTGGCACGAAATACGCATTATG 59.998 43.478 12.71 0.00 46.94 1.90
1235 1316 2.286713 TGGCACGAAATACGCATTATGC 60.287 45.455 7.19 7.19 46.94 3.14
1236 1317 2.286713 GGCACGAAATACGCATTATGCA 60.287 45.455 17.75 0.00 45.36 3.96
1237 1318 3.554524 GCACGAAATACGCATTATGCAT 58.445 40.909 17.75 3.79 45.36 3.96
1238 1319 3.974401 GCACGAAATACGCATTATGCATT 59.026 39.130 17.75 7.41 45.36 3.56
1239 1320 4.440758 GCACGAAATACGCATTATGCATTT 59.559 37.500 17.75 15.10 45.36 2.32
1240 1321 5.623264 GCACGAAATACGCATTATGCATTTA 59.377 36.000 17.75 5.42 45.36 1.40
1241 1322 6.305399 GCACGAAATACGCATTATGCATTTAT 59.695 34.615 17.75 7.44 45.36 1.40
1242 1323 7.647551 CACGAAATACGCATTATGCATTTATG 58.352 34.615 17.75 10.64 45.36 1.90
1243 1324 6.676385 CGAAATACGCATTATGCATTTATGC 58.324 36.000 25.21 25.21 45.36 3.14
1244 1325 6.237279 CGAAATACGCATTATGCATTTATGCC 60.237 38.462 27.20 17.23 45.36 4.40
1245 1326 8.307349 CGAAATACGCATTATGCATTTATGCCT 61.307 37.037 27.20 21.66 45.36 4.75
1269 1350 4.702131 AGTTGATTGATAGTTCCCTGTTGC 59.298 41.667 0.00 0.00 0.00 4.17
1272 1353 5.428253 TGATTGATAGTTCCCTGTTGCTAC 58.572 41.667 0.00 0.00 0.00 3.58
1273 1354 4.901197 TTGATAGTTCCCTGTTGCTACA 57.099 40.909 0.03 0.03 0.00 2.74
1274 1355 4.901197 TGATAGTTCCCTGTTGCTACAA 57.099 40.909 1.93 0.00 32.92 2.41
1275 1356 4.832248 TGATAGTTCCCTGTTGCTACAAG 58.168 43.478 1.93 0.00 32.92 3.16
1276 1357 2.568623 AGTTCCCTGTTGCTACAAGG 57.431 50.000 9.41 9.41 37.23 3.61
1278 1359 2.152016 GTTCCCTGTTGCTACAAGGTC 58.848 52.381 14.43 6.89 37.20 3.85
1279 1360 1.429930 TCCCTGTTGCTACAAGGTCA 58.570 50.000 14.43 0.00 37.20 4.02
1283 1397 2.549754 CCTGTTGCTACAAGGTCACAAG 59.450 50.000 1.93 0.00 32.92 3.16
1295 1409 4.974645 AGGTCACAAGTCAGAAATGGTA 57.025 40.909 0.00 0.00 0.00 3.25
1299 1413 5.352569 GGTCACAAGTCAGAAATGGTATCAG 59.647 44.000 0.00 0.00 0.00 2.90
1306 1420 6.352516 AGTCAGAAATGGTATCAGATTCACC 58.647 40.000 6.97 0.00 0.00 4.02
1312 1426 4.649267 TGGTATCAGATTCACCAAACCA 57.351 40.909 2.86 0.00 39.36 3.67
1313 1427 4.991776 TGGTATCAGATTCACCAAACCAA 58.008 39.130 2.86 0.00 39.36 3.67
1332 1448 2.612212 CAACTTATGGGCATGGTACGAC 59.388 50.000 0.00 0.00 0.00 4.34
1333 1449 1.834896 ACTTATGGGCATGGTACGACA 59.165 47.619 0.00 0.00 0.00 4.35
1337 1453 3.569194 ATGGGCATGGTACGACATAAA 57.431 42.857 0.00 0.00 0.00 1.40
1344 1460 5.163602 GGCATGGTACGACATAAATTTTCCA 60.164 40.000 0.00 0.00 0.00 3.53
1345 1461 5.971202 GCATGGTACGACATAAATTTTCCAG 59.029 40.000 0.00 0.00 0.00 3.86
1347 1463 4.093703 TGGTACGACATAAATTTTCCAGCG 59.906 41.667 0.00 0.00 0.00 5.18
1350 1466 5.212589 ACGACATAAATTTTCCAGCGTAC 57.787 39.130 0.00 0.00 0.00 3.67
1351 1467 4.093850 ACGACATAAATTTTCCAGCGTACC 59.906 41.667 0.00 0.00 0.00 3.34
1352 1468 4.584394 GACATAAATTTTCCAGCGTACCG 58.416 43.478 0.00 0.00 0.00 4.02
1358 1474 0.038892 TTTCCAGCGTACCGACTCAC 60.039 55.000 0.00 0.00 0.00 3.51
1390 1512 0.327259 AGCATCAGACACACCATGCT 59.673 50.000 0.00 0.00 45.72 3.79
1392 1514 1.131883 GCATCAGACACACCATGCTTC 59.868 52.381 0.00 0.00 38.89 3.86
1394 1516 0.320683 TCAGACACACCATGCTTCCG 60.321 55.000 0.00 0.00 0.00 4.30
1395 1517 1.672356 AGACACACCATGCTTCCGC 60.672 57.895 0.00 0.00 0.00 5.54
1398 1520 0.036164 ACACACCATGCTTCCGCTTA 59.964 50.000 0.00 0.00 36.97 3.09
1411 1533 4.036498 GCTTCCGCTTACTCTACTGTCATA 59.964 45.833 0.00 0.00 0.00 2.15
1413 1535 6.072618 GCTTCCGCTTACTCTACTGTCATATA 60.073 42.308 0.00 0.00 0.00 0.86
1417 1539 6.207025 CCGCTTACTCTACTGTCATATACCTT 59.793 42.308 0.00 0.00 0.00 3.50
1427 1549 7.676683 ACTGTCATATACCTTAACCATCACT 57.323 36.000 0.00 0.00 0.00 3.41
1428 1550 7.500992 ACTGTCATATACCTTAACCATCACTG 58.499 38.462 0.00 0.00 0.00 3.66
1430 1552 6.613679 TGTCATATACCTTAACCATCACTGGA 59.386 38.462 0.00 0.00 46.37 3.86
1431 1553 7.126573 TGTCATATACCTTAACCATCACTGGAA 59.873 37.037 0.00 0.00 46.37 3.53
1436 1558 6.345096 ACCTTAACCATCACTGGAATTTTG 57.655 37.500 0.00 0.00 46.37 2.44
1438 1560 6.326323 ACCTTAACCATCACTGGAATTTTGTT 59.674 34.615 0.00 0.00 46.37 2.83
1440 1562 4.605640 ACCATCACTGGAATTTTGTTGG 57.394 40.909 0.00 0.00 46.37 3.77
1441 1563 3.966665 ACCATCACTGGAATTTTGTTGGT 59.033 39.130 0.00 0.00 46.37 3.67
1442 1564 5.144100 ACCATCACTGGAATTTTGTTGGTA 58.856 37.500 0.00 0.00 46.37 3.25
1443 1565 5.010617 ACCATCACTGGAATTTTGTTGGTAC 59.989 40.000 0.00 0.00 46.37 3.34
1446 1568 6.723298 TCACTGGAATTTTGTTGGTACATT 57.277 33.333 0.00 0.00 39.30 2.71
1451 1573 7.118496 TGGAATTTTGTTGGTACATTCTGTT 57.882 32.000 0.00 0.00 39.30 3.16
1461 1583 4.935205 TGGTACATTCTGTTAGATGTGCAC 59.065 41.667 10.75 10.75 32.52 4.57
1462 1584 5.178797 GGTACATTCTGTTAGATGTGCACT 58.821 41.667 19.41 3.19 32.52 4.40
1463 1585 5.063944 GGTACATTCTGTTAGATGTGCACTG 59.936 44.000 19.41 5.59 32.52 3.66
1464 1586 4.005650 ACATTCTGTTAGATGTGCACTGG 58.994 43.478 19.41 0.00 0.00 4.00
1465 1587 2.099141 TCTGTTAGATGTGCACTGGC 57.901 50.000 19.41 7.22 41.68 4.85
1477 1599 1.683943 GCACTGGCATATGGTCATGT 58.316 50.000 4.56 0.00 40.72 3.21
1478 1600 2.849942 GCACTGGCATATGGTCATGTA 58.150 47.619 4.56 0.00 40.72 2.29
1479 1601 2.549754 GCACTGGCATATGGTCATGTAC 59.450 50.000 4.56 0.00 40.72 2.90
1480 1602 3.745480 GCACTGGCATATGGTCATGTACT 60.745 47.826 4.56 0.00 40.72 2.73
1481 1603 4.503123 GCACTGGCATATGGTCATGTACTA 60.503 45.833 4.56 0.00 40.72 1.82
1482 1604 5.798132 CACTGGCATATGGTCATGTACTAT 58.202 41.667 4.56 0.00 33.27 2.12
1483 1605 6.233434 CACTGGCATATGGTCATGTACTATT 58.767 40.000 4.56 0.00 30.86 1.73
1484 1606 6.148315 CACTGGCATATGGTCATGTACTATTG 59.852 42.308 4.56 0.00 30.86 1.90
1485 1607 5.559770 TGGCATATGGTCATGTACTATTGG 58.440 41.667 4.56 0.00 30.86 3.16
1486 1608 4.943705 GGCATATGGTCATGTACTATTGGG 59.056 45.833 4.56 0.00 30.86 4.12
1487 1609 5.280470 GGCATATGGTCATGTACTATTGGGA 60.280 44.000 4.56 0.00 30.86 4.37
1488 1610 6.418101 GCATATGGTCATGTACTATTGGGAT 58.582 40.000 4.56 0.00 30.86 3.85
1489 1611 6.317140 GCATATGGTCATGTACTATTGGGATG 59.683 42.308 4.56 0.00 30.86 3.51
1490 1612 5.912149 ATGGTCATGTACTATTGGGATGT 57.088 39.130 0.00 0.00 0.00 3.06
1491 1613 5.034852 TGGTCATGTACTATTGGGATGTG 57.965 43.478 0.00 0.00 0.00 3.21
1492 1614 3.815401 GGTCATGTACTATTGGGATGTGC 59.185 47.826 0.00 0.00 0.00 4.57
1493 1615 4.450976 GTCATGTACTATTGGGATGTGCA 58.549 43.478 0.00 0.00 0.00 4.57
1494 1616 5.065914 GTCATGTACTATTGGGATGTGCAT 58.934 41.667 0.00 0.00 37.47 3.96
1495 1617 5.366829 CATGTACTATTGGGATGTGCATG 57.633 43.478 8.47 8.47 43.88 4.06
1496 1618 3.819368 TGTACTATTGGGATGTGCATGG 58.181 45.455 0.00 0.00 0.00 3.66
1497 1619 1.696063 ACTATTGGGATGTGCATGGC 58.304 50.000 0.00 0.00 0.00 4.40
1498 1620 0.963962 CTATTGGGATGTGCATGGCC 59.036 55.000 0.00 0.00 0.00 5.36
1499 1621 0.261109 TATTGGGATGTGCATGGCCA 59.739 50.000 8.56 8.56 0.00 5.36
1500 1622 0.399376 ATTGGGATGTGCATGGCCAT 60.399 50.000 14.09 14.09 0.00 4.40
1501 1623 1.331399 TTGGGATGTGCATGGCCATG 61.331 55.000 36.80 36.80 41.60 3.66
1502 1624 1.759299 GGGATGTGCATGGCCATGT 60.759 57.895 39.08 24.41 40.80 3.21
1505 1627 1.965643 GGATGTGCATGGCCATGTTAT 59.034 47.619 39.08 30.23 40.80 1.89
1517 1639 6.206395 TGGCCATGTTATTGAATTGTGTAG 57.794 37.500 0.00 0.00 0.00 2.74
1523 1645 9.161629 CCATGTTATTGAATTGTGTAGACAGTA 57.838 33.333 0.00 0.00 32.26 2.74
1526 1648 9.161629 TGTTATTGAATTGTGTAGACAGTATGG 57.838 33.333 0.00 0.00 43.62 2.74
1529 1651 6.850752 TGAATTGTGTAGACAGTATGGAGA 57.149 37.500 0.00 0.00 43.62 3.71
1535 1659 7.062749 TGTGTAGACAGTATGGAGAAAAGTT 57.937 36.000 0.00 0.00 43.62 2.66
1537 1661 6.308282 GTGTAGACAGTATGGAGAAAAGTTCG 59.692 42.308 0.00 0.00 43.62 3.95
1538 1662 4.822026 AGACAGTATGGAGAAAAGTTCGG 58.178 43.478 0.00 0.00 43.62 4.30
1541 1665 4.202326 ACAGTATGGAGAAAAGTTCGGTGT 60.202 41.667 0.00 0.00 43.62 4.16
1545 1669 3.460103 TGGAGAAAAGTTCGGTGTACAC 58.540 45.455 18.01 18.01 34.02 2.90
1568 1692 7.097192 CACCTGCTGTAGATTTGTAGACTTTA 58.903 38.462 0.00 0.00 0.00 1.85
1569 1693 7.063544 CACCTGCTGTAGATTTGTAGACTTTAC 59.936 40.741 0.00 0.00 0.00 2.01
1570 1694 6.253727 CCTGCTGTAGATTTGTAGACTTTACG 59.746 42.308 0.00 0.00 0.00 3.18
1571 1695 5.575606 TGCTGTAGATTTGTAGACTTTACGC 59.424 40.000 0.00 0.00 0.00 4.42
1574 1698 6.684686 TGTAGATTTGTAGACTTTACGCTGT 58.315 36.000 0.00 0.00 0.00 4.40
1576 1700 7.966753 TGTAGATTTGTAGACTTTACGCTGTAG 59.033 37.037 0.00 0.00 0.00 2.74
1581 1705 5.575957 TGTAGACTTTACGCTGTAGTATGC 58.424 41.667 0.00 0.00 0.00 3.14
1582 1706 4.985538 AGACTTTACGCTGTAGTATGCT 57.014 40.909 0.00 0.00 0.00 3.79
1583 1707 4.922719 AGACTTTACGCTGTAGTATGCTC 58.077 43.478 0.00 0.00 0.00 4.26
1584 1708 4.398358 AGACTTTACGCTGTAGTATGCTCA 59.602 41.667 0.00 0.00 0.00 4.26
1586 1710 5.103000 ACTTTACGCTGTAGTATGCTCAAG 58.897 41.667 0.00 0.00 0.00 3.02
1587 1711 4.976224 TTACGCTGTAGTATGCTCAAGA 57.024 40.909 0.00 0.00 0.00 3.02
1589 1713 4.188247 ACGCTGTAGTATGCTCAAGAAA 57.812 40.909 0.00 0.00 0.00 2.52
1590 1714 4.566004 ACGCTGTAGTATGCTCAAGAAAA 58.434 39.130 0.00 0.00 0.00 2.29
1591 1715 4.627467 ACGCTGTAGTATGCTCAAGAAAAG 59.373 41.667 0.00 0.00 0.00 2.27
1611 1945 1.745653 GGTGGCTTGGATTTAGCAGTC 59.254 52.381 0.00 0.00 40.42 3.51
1612 1946 2.436417 GTGGCTTGGATTTAGCAGTCA 58.564 47.619 0.00 0.00 40.42 3.41
1627 1961 4.848357 AGCAGTCACATTATGCCTAGTTT 58.152 39.130 0.00 0.00 40.89 2.66
1632 1967 5.045578 AGTCACATTATGCCTAGTTTCCTGT 60.046 40.000 0.00 0.00 0.00 4.00
1640 1975 2.514803 CCTAGTTTCCTGTTGTTGGGG 58.485 52.381 0.00 0.00 0.00 4.96
1655 1990 6.657541 TGTTGTTGGGGTAGTATTTCTTGATC 59.342 38.462 0.00 0.00 0.00 2.92
1661 1996 4.762251 GGGTAGTATTTCTTGATCCATGCC 59.238 45.833 0.00 0.00 0.00 4.40
1662 1997 5.456763 GGGTAGTATTTCTTGATCCATGCCT 60.457 44.000 0.00 0.00 0.00 4.75
1663 1998 5.703130 GGTAGTATTTCTTGATCCATGCCTC 59.297 44.000 0.00 0.00 0.00 4.70
1664 1999 4.723309 AGTATTTCTTGATCCATGCCTCC 58.277 43.478 0.00 0.00 0.00 4.30
1667 2002 1.588239 TCTTGATCCATGCCTCCAGT 58.412 50.000 0.00 0.00 0.00 4.00
1669 2004 2.022195 CTTGATCCATGCCTCCAGTTG 58.978 52.381 0.00 0.00 0.00 3.16
1672 2007 0.333993 ATCCATGCCTCCAGTTGCTT 59.666 50.000 0.00 0.00 0.00 3.91
1673 2008 0.112995 TCCATGCCTCCAGTTGCTTT 59.887 50.000 0.00 0.00 0.00 3.51
1674 2009 0.971386 CCATGCCTCCAGTTGCTTTT 59.029 50.000 0.00 0.00 0.00 2.27
1677 2029 0.104671 TGCCTCCAGTTGCTTTTTGC 59.895 50.000 0.00 0.00 43.25 3.68
1689 2041 3.916761 TGCTTTTTGCCATCAGATTCAC 58.083 40.909 0.00 0.00 42.00 3.18
1700 2052 4.637534 CCATCAGATTCACGAAACCTGAAT 59.362 41.667 14.86 1.33 40.38 2.57
1706 2058 7.606073 TCAGATTCACGAAACCTGAATTTATGA 59.394 33.333 10.79 0.00 38.27 2.15
1711 2082 8.741101 TCACGAAACCTGAATTTATGATTTTG 57.259 30.769 0.00 0.00 0.00 2.44
1712 2083 7.812191 TCACGAAACCTGAATTTATGATTTTGG 59.188 33.333 0.00 0.00 0.00 3.28
1744 2125 5.301045 ACTCATAGATGTGATTTGGGCATTG 59.699 40.000 0.00 0.00 0.00 2.82
1746 2127 5.533528 TCATAGATGTGATTTGGGCATTGAG 59.466 40.000 0.00 0.00 0.00 3.02
1747 2128 2.429610 AGATGTGATTTGGGCATTGAGC 59.570 45.455 0.00 0.00 44.65 4.26
1757 2138 3.984292 GCATTGAGCACAGTAGCAC 57.016 52.632 0.00 0.00 44.79 4.40
1779 2160 2.766828 ACCATGCCTCCAGTTACTCTAC 59.233 50.000 0.00 0.00 0.00 2.59
1780 2161 2.103263 CCATGCCTCCAGTTACTCTACC 59.897 54.545 0.00 0.00 0.00 3.18
1787 2170 4.202030 CCTCCAGTTACTCTACCGTCATTC 60.202 50.000 0.00 0.00 0.00 2.67
1790 2173 4.202030 CCAGTTACTCTACCGTCATTCCTC 60.202 50.000 0.00 0.00 0.00 3.71
1791 2174 3.626670 AGTTACTCTACCGTCATTCCTCG 59.373 47.826 0.00 0.00 0.00 4.63
1797 2180 0.460311 ACCGTCATTCCTCGACCATC 59.540 55.000 0.00 0.00 0.00 3.51
1798 2181 0.459899 CCGTCATTCCTCGACCATCA 59.540 55.000 0.00 0.00 0.00 3.07
1820 2203 4.878397 CACTGGAATTTCTCTGGTACATCC 59.122 45.833 0.00 0.00 38.20 3.51
1821 2207 4.122776 CTGGAATTTCTCTGGTACATCCG 58.877 47.826 0.00 0.00 38.20 4.18
1827 2213 1.005569 TCTCTGGTACATCCGGTGAGT 59.994 52.381 0.00 0.94 42.90 3.41
1938 2325 3.753272 AGTGAACATGCGCTGTAGATTTT 59.247 39.130 9.73 0.00 36.98 1.82
1940 2327 4.321745 GTGAACATGCGCTGTAGATTTTTG 59.678 41.667 9.73 0.00 36.98 2.44
1946 2333 4.320023 TGCGCTGTAGATTTTTGGACTTA 58.680 39.130 9.73 0.00 0.00 2.24
1947 2334 4.153475 TGCGCTGTAGATTTTTGGACTTAC 59.847 41.667 9.73 0.00 0.00 2.34
1957 2374 8.315391 AGATTTTTGGACTTACCGTACTAAAC 57.685 34.615 0.00 0.00 42.61 2.01
1974 2391 8.120465 CGTACTAAACTTAGCACCAATAAATGG 58.880 37.037 0.00 0.00 43.66 3.16
1975 2392 6.863275 ACTAAACTTAGCACCAATAAATGGC 58.137 36.000 0.00 0.00 42.68 4.40
1977 2394 7.039363 ACTAAACTTAGCACCAATAAATGGCAA 60.039 33.333 0.00 0.00 42.68 4.52
1991 2408 9.507280 CAATAAATGGCAAGTGTAGATTTGTAG 57.493 33.333 0.00 0.00 0.00 2.74
2035 2490 7.713073 AGAAAAAGATAGACTATAACCAGCAGC 59.287 37.037 0.00 0.00 0.00 5.25
2050 2505 1.975363 GCAGCTCTTTAGGCAGCACG 61.975 60.000 0.00 0.00 40.92 5.34
2076 2578 4.463539 TGCTTGGAACATGTTATGCTGATT 59.536 37.500 11.95 0.00 39.30 2.57
2084 2586 6.822667 ACATGTTATGCTGATTCAGTTTCA 57.177 33.333 14.90 5.37 33.43 2.69
2143 2645 2.060567 TTGCTGGTGCTCTCCTTGCT 62.061 55.000 0.00 0.00 40.48 3.91
2162 2664 2.294512 GCTATTCCTGTGGGCATAAAGC 59.705 50.000 0.00 0.00 44.65 3.51
2179 2681 3.007973 GCGGAAGTCCTTCGCTCCT 62.008 63.158 13.06 0.00 40.37 3.69
2194 2696 1.884067 GCTCCTCTGGTGTTCTTTGGG 60.884 57.143 0.00 0.00 0.00 4.12
2273 2775 0.742281 TGAGCGGCAGATGAAGCTTC 60.742 55.000 19.89 19.89 40.39 3.86
2347 2849 2.562298 TGATTCCTTTGCCAATGTGGAC 59.438 45.455 0.00 0.00 40.96 4.02
2357 2859 3.005684 TGCCAATGTGGACAAGTGAAATC 59.994 43.478 0.00 0.00 40.96 2.17
2360 2862 4.321452 CCAATGTGGACAAGTGAAATCTGG 60.321 45.833 0.00 0.00 40.96 3.86
2366 2868 0.529378 CAAGTGAAATCTGGCCTGGC 59.471 55.000 11.05 11.05 0.00 4.85
2464 2970 6.638063 CCAAATAATGTGTATCGAAGCAATGG 59.362 38.462 0.00 0.00 0.00 3.16
2468 2974 3.000041 TGTGTATCGAAGCAATGGTCAC 59.000 45.455 0.00 0.00 0.00 3.67
2509 3015 3.350833 AGATGACAGTTGAAAGGCCATC 58.649 45.455 5.01 3.05 0.00 3.51
2511 3017 4.225942 AGATGACAGTTGAAAGGCCATCTA 59.774 41.667 5.01 0.00 37.91 1.98
2543 3049 1.270625 TGTTCTTGGGGTCGATGACAC 60.271 52.381 0.00 0.00 34.83 3.67
2544 3050 1.052617 TTCTTGGGGTCGATGACACA 58.947 50.000 1.18 0.00 37.77 3.72
2550 3056 2.213499 GGGGTCGATGACACATGATTC 58.787 52.381 0.00 0.00 37.77 2.52
2623 3129 0.548926 TCAGGGCCCATTACCACTCA 60.549 55.000 27.56 0.00 0.00 3.41
2630 3136 4.447762 GGGCCCATTACCACTCATTAATCT 60.448 45.833 19.95 0.00 0.00 2.40
2631 3137 4.520492 GGCCCATTACCACTCATTAATCTG 59.480 45.833 0.00 0.00 0.00 2.90
2636 3142 8.571336 CCCATTACCACTCATTAATCTGATTTC 58.429 37.037 8.38 0.00 0.00 2.17
2637 3143 8.285394 CCATTACCACTCATTAATCTGATTTCG 58.715 37.037 8.38 0.00 0.00 3.46
2659 3165 5.047943 TCGTTTTCTTTTGTGTCCTTTCCAA 60.048 36.000 0.00 0.00 0.00 3.53
2675 3181 5.451381 CCTTTCCAAGTTTTAAGGGTGTGTC 60.451 44.000 0.00 0.00 34.77 3.67
2679 3185 6.424883 TCCAAGTTTTAAGGGTGTGTCTTAA 58.575 36.000 0.00 0.00 35.61 1.85
2680 3186 7.064229 TCCAAGTTTTAAGGGTGTGTCTTAAT 58.936 34.615 0.00 0.00 36.81 1.40
2681 3187 7.229907 TCCAAGTTTTAAGGGTGTGTCTTAATC 59.770 37.037 0.00 0.00 36.81 1.75
2682 3188 7.230712 CCAAGTTTTAAGGGTGTGTCTTAATCT 59.769 37.037 0.00 0.00 36.81 2.40
2685 3203 5.836024 TTAAGGGTGTGTCTTAATCTGGT 57.164 39.130 0.00 0.00 33.37 4.00
2691 3209 5.300792 GGGTGTGTCTTAATCTGGTTTTTCA 59.699 40.000 0.00 0.00 0.00 2.69
2703 3221 8.846943 AATCTGGTTTTTCATTTTATTCCCAC 57.153 30.769 0.00 0.00 0.00 4.61
2706 3237 8.147704 TCTGGTTTTTCATTTTATTCCCACTTC 58.852 33.333 0.00 0.00 0.00 3.01
2708 3239 9.148879 TGGTTTTTCATTTTATTCCCACTTCTA 57.851 29.630 0.00 0.00 0.00 2.10
2722 3253 6.472887 TCCCACTTCTATCTTTTCATTTCGT 58.527 36.000 0.00 0.00 0.00 3.85
2731 3262 8.721478 TCTATCTTTTCATTTCGTTTCTTCCAG 58.279 33.333 0.00 0.00 0.00 3.86
2768 3299 1.610363 TTTTTATGGCGCAGTGGTGA 58.390 45.000 10.83 0.00 0.00 4.02
2769 3300 1.610363 TTTTATGGCGCAGTGGTGAA 58.390 45.000 10.83 0.00 0.00 3.18
2770 3301 1.164411 TTTATGGCGCAGTGGTGAAG 58.836 50.000 10.83 0.00 0.00 3.02
2771 3302 0.036164 TTATGGCGCAGTGGTGAAGT 59.964 50.000 10.83 0.00 0.00 3.01
2772 3303 0.391130 TATGGCGCAGTGGTGAAGTC 60.391 55.000 10.83 0.00 0.00 3.01
2773 3304 3.050275 GGCGCAGTGGTGAAGTCC 61.050 66.667 10.83 0.00 0.00 3.85
2774 3305 2.031163 GCGCAGTGGTGAAGTCCT 59.969 61.111 0.30 0.00 0.00 3.85
2775 3306 2.029844 GCGCAGTGGTGAAGTCCTC 61.030 63.158 0.30 0.00 0.00 3.71
2776 3307 1.374758 CGCAGTGGTGAAGTCCTCC 60.375 63.158 0.00 0.00 0.00 4.30
2777 3308 1.003233 GCAGTGGTGAAGTCCTCCC 60.003 63.158 0.00 0.00 0.00 4.30
2778 3309 1.679898 CAGTGGTGAAGTCCTCCCC 59.320 63.158 0.00 0.00 0.00 4.81
2779 3310 1.127567 CAGTGGTGAAGTCCTCCCCA 61.128 60.000 0.00 0.00 0.00 4.96
2780 3311 1.128188 AGTGGTGAAGTCCTCCCCAC 61.128 60.000 0.00 0.00 44.69 4.61
2781 3312 1.128188 GTGGTGAAGTCCTCCCCACT 61.128 60.000 0.00 0.00 41.83 4.00
2782 3313 0.401395 TGGTGAAGTCCTCCCCACTT 60.401 55.000 0.00 0.00 36.77 3.16
2783 3314 0.036875 GGTGAAGTCCTCCCCACTTG 59.963 60.000 0.00 0.00 34.10 3.16
2784 3315 0.765510 GTGAAGTCCTCCCCACTTGT 59.234 55.000 0.00 0.00 34.10 3.16
2785 3316 0.764890 TGAAGTCCTCCCCACTTGTG 59.235 55.000 0.00 0.00 34.10 3.33
2786 3317 0.606673 GAAGTCCTCCCCACTTGTGC 60.607 60.000 0.00 0.00 34.10 4.57
2787 3318 2.034221 GTCCTCCCCACTTGTGCC 59.966 66.667 0.00 0.00 0.00 5.01
2788 3319 2.449518 TCCTCCCCACTTGTGCCA 60.450 61.111 0.00 0.00 0.00 4.92
2789 3320 2.081787 TCCTCCCCACTTGTGCCAA 61.082 57.895 0.00 0.00 0.00 4.52
2790 3321 1.604593 CCTCCCCACTTGTGCCAAG 60.605 63.158 11.87 11.87 0.00 3.61
2791 3322 1.455849 CTCCCCACTTGTGCCAAGA 59.544 57.895 18.22 0.00 0.00 3.02
2792 3323 0.607489 CTCCCCACTTGTGCCAAGAG 60.607 60.000 18.22 11.85 0.00 2.85
2793 3324 1.604593 CCCCACTTGTGCCAAGAGG 60.605 63.158 18.22 18.17 38.23 3.69
2794 3325 1.151450 CCCACTTGTGCCAAGAGGT 59.849 57.895 21.11 2.99 37.19 3.85
2795 3326 0.890996 CCCACTTGTGCCAAGAGGTC 60.891 60.000 21.11 0.00 37.19 3.85
2796 3327 0.890996 CCACTTGTGCCAAGAGGTCC 60.891 60.000 18.22 0.00 37.19 4.46
2797 3328 0.109342 CACTTGTGCCAAGAGGTCCT 59.891 55.000 18.22 0.00 37.19 3.85
2798 3329 0.109342 ACTTGTGCCAAGAGGTCCTG 59.891 55.000 18.22 0.00 37.19 3.86
2799 3330 1.228245 TTGTGCCAAGAGGTCCTGC 60.228 57.895 0.00 0.00 37.19 4.85
2800 3331 2.743928 GTGCCAAGAGGTCCTGCG 60.744 66.667 0.00 0.00 37.19 5.18
2801 3332 3.241530 TGCCAAGAGGTCCTGCGT 61.242 61.111 0.00 0.00 37.19 5.24
2802 3333 2.032681 GCCAAGAGGTCCTGCGTT 59.967 61.111 0.00 0.00 37.19 4.84
2803 3334 2.035442 GCCAAGAGGTCCTGCGTTC 61.035 63.158 0.00 0.00 37.19 3.95
2804 3335 1.738099 CCAAGAGGTCCTGCGTTCG 60.738 63.158 0.00 0.00 0.00 3.95
2805 3336 1.289066 CAAGAGGTCCTGCGTTCGA 59.711 57.895 0.00 0.00 0.00 3.71
2806 3337 0.319555 CAAGAGGTCCTGCGTTCGAA 60.320 55.000 0.00 0.00 0.00 3.71
2807 3338 0.319641 AAGAGGTCCTGCGTTCGAAC 60.320 55.000 18.47 18.47 0.00 3.95
2808 3339 1.737008 GAGGTCCTGCGTTCGAACC 60.737 63.158 22.07 14.94 0.00 3.62
2809 3340 2.029964 GGTCCTGCGTTCGAACCA 59.970 61.111 22.07 18.34 0.00 3.67
2810 3341 2.027625 GGTCCTGCGTTCGAACCAG 61.028 63.158 26.72 26.72 0.00 4.00
2811 3342 2.357034 TCCTGCGTTCGAACCAGC 60.357 61.111 27.60 23.35 0.00 4.85
2812 3343 3.423154 CCTGCGTTCGAACCAGCC 61.423 66.667 27.60 14.83 0.00 4.85
2813 3344 2.357517 CTGCGTTCGAACCAGCCT 60.358 61.111 24.25 0.00 0.00 4.58
2814 3345 2.357034 TGCGTTCGAACCAGCCTC 60.357 61.111 22.07 5.71 0.00 4.70
2815 3346 2.048127 GCGTTCGAACCAGCCTCT 60.048 61.111 22.07 0.00 0.00 3.69
2816 3347 2.095252 GCGTTCGAACCAGCCTCTC 61.095 63.158 22.07 0.00 0.00 3.20
2817 3348 1.587054 CGTTCGAACCAGCCTCTCT 59.413 57.895 22.07 0.00 0.00 3.10
2818 3349 0.734253 CGTTCGAACCAGCCTCTCTG 60.734 60.000 22.07 0.54 42.49 3.35
2819 3350 1.016653 GTTCGAACCAGCCTCTCTGC 61.017 60.000 17.68 0.00 41.50 4.26
2820 3351 1.471829 TTCGAACCAGCCTCTCTGCA 61.472 55.000 0.00 0.00 41.50 4.41
2821 3352 1.220206 CGAACCAGCCTCTCTGCAT 59.780 57.895 0.00 0.00 41.50 3.96
2822 3353 0.392193 CGAACCAGCCTCTCTGCATT 60.392 55.000 0.00 0.00 41.50 3.56
2823 3354 1.093159 GAACCAGCCTCTCTGCATTG 58.907 55.000 0.00 0.00 41.50 2.82
2824 3355 0.964358 AACCAGCCTCTCTGCATTGC 60.964 55.000 0.46 0.46 41.50 3.56
2825 3356 1.378119 CCAGCCTCTCTGCATTGCA 60.378 57.895 11.50 11.50 41.50 4.08
2826 3357 1.654954 CCAGCCTCTCTGCATTGCAC 61.655 60.000 7.38 0.00 41.50 4.57
2827 3358 0.677098 CAGCCTCTCTGCATTGCACT 60.677 55.000 7.38 0.00 35.78 4.40
2828 3359 0.037877 AGCCTCTCTGCATTGCACTT 59.962 50.000 7.38 0.00 33.79 3.16
2829 3360 0.886563 GCCTCTCTGCATTGCACTTT 59.113 50.000 7.38 0.00 33.79 2.66
2830 3361 1.402456 GCCTCTCTGCATTGCACTTTG 60.402 52.381 7.38 0.00 33.79 2.77
2831 3362 1.402456 CCTCTCTGCATTGCACTTTGC 60.402 52.381 7.38 8.20 45.29 3.68
2841 3372 3.339547 GCACTTTGCAGGGGTAAGA 57.660 52.632 2.16 0.00 44.26 2.10
2842 3373 0.881796 GCACTTTGCAGGGGTAAGAC 59.118 55.000 2.16 0.00 44.26 3.01
2843 3374 1.545651 GCACTTTGCAGGGGTAAGACT 60.546 52.381 2.16 0.00 44.26 3.24
2844 3375 2.290071 GCACTTTGCAGGGGTAAGACTA 60.290 50.000 2.16 0.00 44.26 2.59
2845 3376 3.600388 CACTTTGCAGGGGTAAGACTAG 58.400 50.000 2.16 0.00 0.00 2.57
2846 3377 2.572104 ACTTTGCAGGGGTAAGACTAGG 59.428 50.000 2.16 0.00 0.00 3.02
2847 3378 2.337359 TTGCAGGGGTAAGACTAGGT 57.663 50.000 0.00 0.00 0.00 3.08
2848 3379 2.337359 TGCAGGGGTAAGACTAGGTT 57.663 50.000 0.00 0.00 0.00 3.50
2849 3380 2.185387 TGCAGGGGTAAGACTAGGTTC 58.815 52.381 0.00 0.00 0.00 3.62
2850 3381 1.485480 GCAGGGGTAAGACTAGGTTCC 59.515 57.143 0.00 0.00 0.00 3.62
2851 3382 2.893153 GCAGGGGTAAGACTAGGTTCCT 60.893 54.545 0.00 0.00 0.00 3.36
2852 3383 3.629282 GCAGGGGTAAGACTAGGTTCCTA 60.629 52.174 0.00 0.00 0.00 2.94
2853 3384 4.817286 CAGGGGTAAGACTAGGTTCCTAT 58.183 47.826 0.00 0.00 0.00 2.57
2854 3385 5.694949 GCAGGGGTAAGACTAGGTTCCTATA 60.695 48.000 0.00 0.00 0.00 1.31
2855 3386 6.379579 CAGGGGTAAGACTAGGTTCCTATAA 58.620 44.000 0.00 0.00 0.00 0.98
2856 3387 7.017531 CAGGGGTAAGACTAGGTTCCTATAAT 58.982 42.308 0.00 0.00 0.00 1.28
2857 3388 7.178805 CAGGGGTAAGACTAGGTTCCTATAATC 59.821 44.444 0.00 0.00 0.00 1.75
2858 3389 6.440010 GGGGTAAGACTAGGTTCCTATAATCC 59.560 46.154 0.00 0.00 0.00 3.01
2859 3390 6.440010 GGGTAAGACTAGGTTCCTATAATCCC 59.560 46.154 0.00 4.36 0.00 3.85
2860 3391 7.247500 GGTAAGACTAGGTTCCTATAATCCCT 58.753 42.308 0.00 0.00 0.00 4.20
2861 3392 7.396907 GGTAAGACTAGGTTCCTATAATCCCTC 59.603 44.444 0.00 0.00 0.00 4.30
2862 3393 5.906254 AGACTAGGTTCCTATAATCCCTCC 58.094 45.833 0.00 0.00 0.00 4.30
2863 3394 5.024785 GACTAGGTTCCTATAATCCCTCCC 58.975 50.000 0.00 0.00 0.00 4.30
2864 3395 3.293215 AGGTTCCTATAATCCCTCCCC 57.707 52.381 0.00 0.00 0.00 4.81
2865 3396 2.531463 AGGTTCCTATAATCCCTCCCCA 59.469 50.000 0.00 0.00 0.00 4.96
2866 3397 2.913617 GGTTCCTATAATCCCTCCCCAG 59.086 54.545 0.00 0.00 0.00 4.45
2867 3398 3.441054 GGTTCCTATAATCCCTCCCCAGA 60.441 52.174 0.00 0.00 0.00 3.86
2868 3399 3.562108 TCCTATAATCCCTCCCCAGAC 57.438 52.381 0.00 0.00 0.00 3.51
2869 3400 2.113777 TCCTATAATCCCTCCCCAGACC 59.886 54.545 0.00 0.00 0.00 3.85
2870 3401 2.552367 CTATAATCCCTCCCCAGACCC 58.448 57.143 0.00 0.00 0.00 4.46
2871 3402 0.103876 ATAATCCCTCCCCAGACCCC 60.104 60.000 0.00 0.00 0.00 4.95
2872 3403 1.542093 TAATCCCTCCCCAGACCCCA 61.542 60.000 0.00 0.00 0.00 4.96
2873 3404 3.660092 ATCCCTCCCCAGACCCCAC 62.660 68.421 0.00 0.00 0.00 4.61
2875 3406 4.354943 CCTCCCCAGACCCCACCT 62.355 72.222 0.00 0.00 0.00 4.00
2876 3407 2.204151 CTCCCCAGACCCCACCTT 60.204 66.667 0.00 0.00 0.00 3.50
2877 3408 2.531685 TCCCCAGACCCCACCTTG 60.532 66.667 0.00 0.00 0.00 3.61
2878 3409 2.858974 CCCCAGACCCCACCTTGT 60.859 66.667 0.00 0.00 0.00 3.16
2879 3410 2.436109 CCCAGACCCCACCTTGTG 59.564 66.667 0.00 0.00 0.00 3.33
2880 3411 2.460853 CCCAGACCCCACCTTGTGT 61.461 63.158 0.00 0.00 0.00 3.72
2881 3412 1.228245 CCAGACCCCACCTTGTGTG 60.228 63.158 0.00 0.00 45.01 3.82
2888 3419 4.907457 CACCTTGTGTGGGAGCTT 57.093 55.556 0.00 0.00 41.52 3.74
2889 3420 2.633860 CACCTTGTGTGGGAGCTTC 58.366 57.895 0.00 0.00 41.52 3.86
2890 3421 0.109342 CACCTTGTGTGGGAGCTTCT 59.891 55.000 0.00 0.00 41.52 2.85
2891 3422 1.347707 CACCTTGTGTGGGAGCTTCTA 59.652 52.381 0.00 0.00 41.52 2.10
2892 3423 2.026822 CACCTTGTGTGGGAGCTTCTAT 60.027 50.000 0.00 0.00 41.52 1.98
2893 3424 2.026822 ACCTTGTGTGGGAGCTTCTATG 60.027 50.000 0.00 0.00 0.00 2.23
2894 3425 2.012673 CTTGTGTGGGAGCTTCTATGC 58.987 52.381 0.00 0.00 0.00 3.14
2895 3426 0.983467 TGTGTGGGAGCTTCTATGCA 59.017 50.000 0.00 0.00 34.99 3.96
2896 3427 1.339055 TGTGTGGGAGCTTCTATGCAC 60.339 52.381 0.00 0.00 34.99 4.57
2897 3428 1.065854 GTGTGGGAGCTTCTATGCACT 60.066 52.381 0.00 0.00 34.99 4.40
2898 3429 1.065926 TGTGGGAGCTTCTATGCACTG 60.066 52.381 0.00 0.00 34.99 3.66
2899 3430 0.543277 TGGGAGCTTCTATGCACTGG 59.457 55.000 0.00 0.00 34.99 4.00
2900 3431 0.179034 GGGAGCTTCTATGCACTGGG 60.179 60.000 0.00 0.00 34.99 4.45
2901 3432 0.543749 GGAGCTTCTATGCACTGGGT 59.456 55.000 0.00 0.00 34.99 4.51
2902 3433 1.474143 GGAGCTTCTATGCACTGGGTC 60.474 57.143 0.00 0.00 34.99 4.46
2903 3434 1.484240 GAGCTTCTATGCACTGGGTCT 59.516 52.381 0.00 0.00 34.99 3.85
2904 3435 1.209019 AGCTTCTATGCACTGGGTCTG 59.791 52.381 0.00 0.00 34.99 3.51
2905 3436 1.065854 GCTTCTATGCACTGGGTCTGT 60.066 52.381 0.00 0.00 0.00 3.41
2906 3437 2.898705 CTTCTATGCACTGGGTCTGTC 58.101 52.381 0.00 0.00 0.00 3.51
2907 3438 1.195115 TCTATGCACTGGGTCTGTCC 58.805 55.000 0.00 0.00 0.00 4.02
2908 3439 1.198713 CTATGCACTGGGTCTGTCCT 58.801 55.000 0.00 0.00 36.25 3.85
2909 3440 2.024369 TCTATGCACTGGGTCTGTCCTA 60.024 50.000 0.00 0.00 36.25 2.94
2910 3441 1.885049 ATGCACTGGGTCTGTCCTAT 58.115 50.000 0.00 0.00 36.25 2.57
2911 3442 1.195115 TGCACTGGGTCTGTCCTATC 58.805 55.000 0.00 0.00 36.25 2.08
2912 3443 1.273267 TGCACTGGGTCTGTCCTATCT 60.273 52.381 0.00 0.00 36.25 1.98
2913 3444 1.834263 GCACTGGGTCTGTCCTATCTT 59.166 52.381 0.00 0.00 36.25 2.40
2914 3445 2.237392 GCACTGGGTCTGTCCTATCTTT 59.763 50.000 0.00 0.00 36.25 2.52
2915 3446 3.307762 GCACTGGGTCTGTCCTATCTTTT 60.308 47.826 0.00 0.00 36.25 2.27
2916 3447 4.807643 GCACTGGGTCTGTCCTATCTTTTT 60.808 45.833 0.00 0.00 36.25 1.94
2986 3560 9.970395 TCATGATGAGCATTTTTCAAATATACC 57.030 29.630 0.00 0.00 34.15 2.73
3025 3599 1.960417 TCTGTTGATGTTTCCGCACA 58.040 45.000 0.00 0.00 0.00 4.57
3032 3606 2.223456 TGATGTTTCCGCACACAAACAG 60.223 45.455 3.84 0.00 43.81 3.16
3043 3617 4.437495 CGCACACAAACAGTTTTCAGTATG 59.563 41.667 0.00 0.00 37.54 2.39
3048 3622 9.515020 CACACAAACAGTTTTCAGTATGTAAAT 57.485 29.630 0.00 0.00 37.68 1.40
3162 3783 2.233566 TGCCAGAATCCAGCCCACT 61.234 57.895 0.00 0.00 0.00 4.00
3180 3801 4.918588 CCACTTAGGGACCTAAATTGTGT 58.081 43.478 19.28 9.72 37.97 3.72
3181 3802 4.941873 CCACTTAGGGACCTAAATTGTGTC 59.058 45.833 19.28 0.00 37.97 3.67
3182 3803 4.941873 CACTTAGGGACCTAAATTGTGTCC 59.058 45.833 11.65 11.14 46.31 4.02
3189 3810 5.368989 GGACCTAAATTGTGTCCATAGAGG 58.631 45.833 13.60 0.00 46.29 3.69
3190 3811 4.781934 ACCTAAATTGTGTCCATAGAGGC 58.218 43.478 0.00 0.00 37.29 4.70
3191 3812 4.137543 CCTAAATTGTGTCCATAGAGGCC 58.862 47.826 0.00 0.00 37.29 5.19
3201 3822 1.428869 CATAGAGGCCCAGCTAACCT 58.571 55.000 0.00 1.13 36.19 3.50
3206 3827 3.127533 GCCCAGCTAACCTGCACG 61.128 66.667 0.00 0.00 40.36 5.34
3214 3835 0.250553 CTAACCTGCACGGACCCAAA 60.251 55.000 8.91 0.00 36.31 3.28
3225 3846 4.994756 ACCCAAAGCCCAAGCCGG 62.995 66.667 0.00 0.00 41.25 6.13
3234 3855 1.365999 CCCAAGCCGGTCAAAAACC 59.634 57.895 1.90 0.00 45.45 3.27
3249 3870 3.430333 AAAACCCAACGAATGTGACAC 57.570 42.857 0.00 0.00 0.00 3.67
3252 3873 3.410631 ACCCAACGAATGTGACACATA 57.589 42.857 21.10 0.00 37.97 2.29
3255 3876 4.764823 ACCCAACGAATGTGACACATATTT 59.235 37.500 21.10 11.51 37.97 1.40
3258 3879 5.123820 CCAACGAATGTGACACATATTTCCT 59.876 40.000 21.10 4.70 37.97 3.36
3259 3880 6.250819 CAACGAATGTGACACATATTTCCTC 58.749 40.000 21.10 12.55 37.97 3.71
3260 3881 4.566759 ACGAATGTGACACATATTTCCTCG 59.433 41.667 25.41 25.41 37.97 4.63
3261 3882 4.803613 CGAATGTGACACATATTTCCTCGA 59.196 41.667 23.92 0.00 37.97 4.04
3266 3887 6.348498 TGTGACACATATTTCCTCGATCAAT 58.652 36.000 3.56 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 3.102090 GGATTCCCCTGTTGCTAGC 57.898 57.895 8.10 8.10 0.00 3.42
39 41 9.880157 AATGCTTAATAAGTTTCATCTTGCAAT 57.120 25.926 0.00 0.00 29.82 3.56
40 42 9.357652 GAATGCTTAATAAGTTTCATCTTGCAA 57.642 29.630 0.00 0.00 29.82 4.08
136 138 3.131046 GGTAAAACAGATGAGGGCATTGG 59.869 47.826 0.00 0.00 34.11 3.16
170 172 4.344102 TGGGATAGGAAAATAGACCGTGAG 59.656 45.833 0.00 0.00 0.00 3.51
204 206 5.334414 GGTGAACATGAGAAGCTTGTGTTAG 60.334 44.000 2.10 0.00 35.32 2.34
213 215 1.929836 CTAGCGGTGAACATGAGAAGC 59.070 52.381 0.00 0.00 0.00 3.86
215 217 3.953712 TTCTAGCGGTGAACATGAGAA 57.046 42.857 0.00 0.00 0.00 2.87
218 220 3.678056 ACTTTCTAGCGGTGAACATGA 57.322 42.857 0.00 0.00 0.00 3.07
283 285 6.056428 TCCTGCTACTTTTCGTTTCTTTTC 57.944 37.500 0.00 0.00 0.00 2.29
290 293 4.058817 CAGAGTTCCTGCTACTTTTCGTT 58.941 43.478 0.00 0.00 35.89 3.85
291 294 3.321111 TCAGAGTTCCTGCTACTTTTCGT 59.679 43.478 0.00 0.00 42.62 3.85
292 295 3.914312 TCAGAGTTCCTGCTACTTTTCG 58.086 45.455 0.00 0.00 42.62 3.46
293 296 7.466590 GCATAATCAGAGTTCCTGCTACTTTTC 60.467 40.741 0.00 0.00 42.62 2.29
294 297 6.317391 GCATAATCAGAGTTCCTGCTACTTTT 59.683 38.462 0.00 0.00 42.62 2.27
295 298 5.819901 GCATAATCAGAGTTCCTGCTACTTT 59.180 40.000 0.00 0.00 42.62 2.66
296 299 5.104776 TGCATAATCAGAGTTCCTGCTACTT 60.105 40.000 0.00 0.00 42.62 2.24
297 300 4.406972 TGCATAATCAGAGTTCCTGCTACT 59.593 41.667 0.00 0.00 42.62 2.57
298 301 4.697514 TGCATAATCAGAGTTCCTGCTAC 58.302 43.478 0.00 0.00 42.62 3.58
299 302 4.651045 TCTGCATAATCAGAGTTCCTGCTA 59.349 41.667 0.00 0.00 42.62 3.49
300 303 3.453717 TCTGCATAATCAGAGTTCCTGCT 59.546 43.478 0.00 0.00 42.62 4.24
304 307 3.135530 AGGGTCTGCATAATCAGAGTTCC 59.864 47.826 0.00 0.00 43.10 3.62
341 349 7.763528 GGTTGCATATCATTCATTGGTTTACAA 59.236 33.333 0.00 0.00 44.54 2.41
342 350 7.093596 TGGTTGCATATCATTCATTGGTTTACA 60.094 33.333 0.00 0.00 0.00 2.41
343 351 7.264221 TGGTTGCATATCATTCATTGGTTTAC 58.736 34.615 0.00 0.00 0.00 2.01
344 352 7.415592 TGGTTGCATATCATTCATTGGTTTA 57.584 32.000 0.00 0.00 0.00 2.01
345 353 6.297080 TGGTTGCATATCATTCATTGGTTT 57.703 33.333 0.00 0.00 0.00 3.27
405 420 7.829211 CCTGTTTCTCTTCCCTGTATTTAATGA 59.171 37.037 0.00 0.00 0.00 2.57
409 424 5.788533 TCCCTGTTTCTCTTCCCTGTATTTA 59.211 40.000 0.00 0.00 0.00 1.40
412 427 3.777522 CTCCCTGTTTCTCTTCCCTGTAT 59.222 47.826 0.00 0.00 0.00 2.29
519 534 4.754667 GGGAAGTCGGTGGTCGCC 62.755 72.222 0.00 0.00 39.05 5.54
537 552 1.464997 GTTTGACAGGCGATGGAGAAC 59.535 52.381 0.00 0.00 0.00 3.01
564 579 2.691252 CCTAGCCCTCCCCGGTTT 60.691 66.667 0.00 0.00 0.00 3.27
566 581 4.477119 GACCTAGCCCTCCCCGGT 62.477 72.222 0.00 0.00 0.00 5.28
642 662 3.013932 CCTGCTTGCTCCTCCCCT 61.014 66.667 0.00 0.00 0.00 4.79
699 719 3.316573 CTTCCTCTCCACCGCCACC 62.317 68.421 0.00 0.00 0.00 4.61
700 720 2.266055 CTTCCTCTCCACCGCCAC 59.734 66.667 0.00 0.00 0.00 5.01
701 721 3.706373 GCTTCCTCTCCACCGCCA 61.706 66.667 0.00 0.00 0.00 5.69
702 722 4.475135 GGCTTCCTCTCCACCGCC 62.475 72.222 0.00 0.00 0.00 6.13
703 723 4.821589 CGGCTTCCTCTCCACCGC 62.822 72.222 0.00 0.00 37.05 5.68
704 724 4.148825 CCGGCTTCCTCTCCACCG 62.149 72.222 0.00 0.00 43.44 4.94
705 725 4.475135 GCCGGCTTCCTCTCCACC 62.475 72.222 22.15 0.00 0.00 4.61
706 726 4.821589 CGCCGGCTTCCTCTCCAC 62.822 72.222 26.68 0.00 0.00 4.02
733 758 2.523412 TAGCTCCCGATTCCCCCG 60.523 66.667 0.00 0.00 0.00 5.73
734 759 2.217745 CCTAGCTCCCGATTCCCCC 61.218 68.421 0.00 0.00 0.00 5.40
766 791 2.359981 TCTGGTGTCGGTATCCCTAG 57.640 55.000 0.00 0.00 0.00 3.02
767 792 2.832643 TTCTGGTGTCGGTATCCCTA 57.167 50.000 0.00 0.00 0.00 3.53
768 793 1.831736 CTTTCTGGTGTCGGTATCCCT 59.168 52.381 0.00 0.00 0.00 4.20
769 794 1.829222 TCTTTCTGGTGTCGGTATCCC 59.171 52.381 0.00 0.00 0.00 3.85
770 795 3.604875 TTCTTTCTGGTGTCGGTATCC 57.395 47.619 0.00 0.00 0.00 2.59
773 810 3.125316 CGTTTTCTTTCTGGTGTCGGTA 58.875 45.455 0.00 0.00 0.00 4.02
779 816 2.286772 CCGAACCGTTTTCTTTCTGGTG 60.287 50.000 0.00 0.00 32.14 4.17
804 841 0.472044 GAAGGGATGAAGGAGGGAGC 59.528 60.000 0.00 0.00 0.00 4.70
816 853 2.446802 GGGGCTCGAGGAAGGGAT 60.447 66.667 15.58 0.00 0.00 3.85
922 967 2.766651 GGGCGGTGGATGGAGGTA 60.767 66.667 0.00 0.00 0.00 3.08
939 984 2.640987 GGATCAACCTGCGTACGAACG 61.641 57.143 21.65 4.86 42.95 3.95
995 1040 1.079127 CCGACTCGGTCCATTGCTT 60.079 57.895 9.51 0.00 42.73 3.91
1062 1107 3.474570 CAGGGAAGGGAGAGCCGG 61.475 72.222 0.00 0.00 33.83 6.13
1082 1127 3.132925 CAGCAAAAATCACAAGGTTGGG 58.867 45.455 0.00 0.00 0.00 4.12
1116 1161 0.390860 GGCAGGCACTACATCGATCT 59.609 55.000 0.00 0.00 36.02 2.75
1118 1163 1.615883 CTAGGCAGGCACTACATCGAT 59.384 52.381 0.00 0.00 36.02 3.59
1131 1179 1.810412 GCGAAACCCATACCTAGGCAG 60.810 57.143 9.30 0.00 0.00 4.85
1157 1205 2.051345 CAACGAACACCTTGCGGC 60.051 61.111 0.00 0.00 0.00 6.53
1183 1231 1.304052 TGGGGAATTCCTGGCGTTG 60.304 57.895 23.63 0.00 35.95 4.10
1213 1294 3.288242 CATAATGCGTATTTCGTGCCAC 58.712 45.455 3.47 0.00 42.13 5.01
1236 1317 9.289782 GGAACTATCAATCAACTAGGCATAAAT 57.710 33.333 0.00 0.00 0.00 1.40
1237 1318 7.719633 GGGAACTATCAATCAACTAGGCATAAA 59.280 37.037 0.00 0.00 0.00 1.40
1238 1319 7.072454 AGGGAACTATCAATCAACTAGGCATAA 59.928 37.037 0.00 0.00 40.61 1.90
1239 1320 6.558775 AGGGAACTATCAATCAACTAGGCATA 59.441 38.462 0.00 0.00 40.61 3.14
1240 1321 5.370880 AGGGAACTATCAATCAACTAGGCAT 59.629 40.000 0.00 0.00 40.61 4.40
1241 1322 4.721776 AGGGAACTATCAATCAACTAGGCA 59.278 41.667 0.00 0.00 40.61 4.75
1242 1323 5.059833 CAGGGAACTATCAATCAACTAGGC 58.940 45.833 0.00 0.00 40.21 3.93
1243 1324 6.240549 ACAGGGAACTATCAATCAACTAGG 57.759 41.667 0.00 0.00 40.21 3.02
1244 1325 6.037610 GCAACAGGGAACTATCAATCAACTAG 59.962 42.308 0.00 0.00 40.21 2.57
1245 1326 5.880332 GCAACAGGGAACTATCAATCAACTA 59.120 40.000 0.00 0.00 40.21 2.24
1246 1327 4.702131 GCAACAGGGAACTATCAATCAACT 59.298 41.667 0.00 0.00 40.21 3.16
1247 1328 4.702131 AGCAACAGGGAACTATCAATCAAC 59.298 41.667 0.00 0.00 40.21 3.18
1248 1329 4.922206 AGCAACAGGGAACTATCAATCAA 58.078 39.130 0.00 0.00 40.21 2.57
1249 1330 4.574674 AGCAACAGGGAACTATCAATCA 57.425 40.909 0.00 0.00 40.21 2.57
1250 1331 5.428253 TGTAGCAACAGGGAACTATCAATC 58.572 41.667 0.00 0.00 40.21 2.67
1251 1332 5.435686 TGTAGCAACAGGGAACTATCAAT 57.564 39.130 0.00 0.00 40.21 2.57
1252 1333 4.901197 TGTAGCAACAGGGAACTATCAA 57.099 40.909 0.00 0.00 40.21 2.57
1253 1334 4.832248 CTTGTAGCAACAGGGAACTATCA 58.168 43.478 0.00 0.00 40.21 2.15
1269 1350 5.180117 CCATTTCTGACTTGTGACCTTGTAG 59.820 44.000 0.00 0.00 0.00 2.74
1272 1353 3.885297 ACCATTTCTGACTTGTGACCTTG 59.115 43.478 0.00 0.00 0.00 3.61
1273 1354 4.170468 ACCATTTCTGACTTGTGACCTT 57.830 40.909 0.00 0.00 0.00 3.50
1274 1355 3.864789 ACCATTTCTGACTTGTGACCT 57.135 42.857 0.00 0.00 0.00 3.85
1275 1356 5.245531 TGATACCATTTCTGACTTGTGACC 58.754 41.667 0.00 0.00 0.00 4.02
1276 1357 6.166279 TCTGATACCATTTCTGACTTGTGAC 58.834 40.000 0.00 0.00 0.00 3.67
1278 1359 7.335171 TGAATCTGATACCATTTCTGACTTGTG 59.665 37.037 0.00 0.00 0.00 3.33
1279 1360 7.335422 GTGAATCTGATACCATTTCTGACTTGT 59.665 37.037 0.00 0.00 0.00 3.16
1283 1397 6.115446 TGGTGAATCTGATACCATTTCTGAC 58.885 40.000 7.97 0.00 39.43 3.51
1295 1409 6.153340 CCATAAGTTGGTTTGGTGAATCTGAT 59.847 38.462 0.00 0.00 40.99 2.90
1299 1413 4.620567 GCCCATAAGTTGGTTTGGTGAATC 60.621 45.833 0.00 0.00 44.83 2.52
1306 1420 2.566724 ACCATGCCCATAAGTTGGTTTG 59.433 45.455 0.00 0.00 44.83 2.93
1312 1426 2.237643 TGTCGTACCATGCCCATAAGTT 59.762 45.455 0.00 0.00 0.00 2.66
1313 1427 1.834896 TGTCGTACCATGCCCATAAGT 59.165 47.619 0.00 0.00 0.00 2.24
1321 1437 5.885881 TGGAAAATTTATGTCGTACCATGC 58.114 37.500 0.00 0.00 0.00 4.06
1329 1445 4.584394 GGTACGCTGGAAAATTTATGTCG 58.416 43.478 0.00 0.00 0.00 4.35
1358 1474 4.634443 TGTCTGATGCTCAAATCACATCTG 59.366 41.667 0.00 0.00 40.66 2.90
1371 1493 0.327259 AGCATGGTGTGTCTGATGCT 59.673 50.000 0.00 0.00 45.26 3.79
1376 1498 2.165380 CGGAAGCATGGTGTGTCTG 58.835 57.895 0.00 0.00 0.00 3.51
1390 1512 6.206243 GGTATATGACAGTAGAGTAAGCGGAA 59.794 42.308 0.00 0.00 0.00 4.30
1392 1514 5.706369 AGGTATATGACAGTAGAGTAAGCGG 59.294 44.000 0.00 0.00 0.00 5.52
1394 1516 9.896263 GTTAAGGTATATGACAGTAGAGTAAGC 57.104 37.037 0.00 0.00 0.00 3.09
1398 1520 9.080097 GATGGTTAAGGTATATGACAGTAGAGT 57.920 37.037 0.00 0.00 0.00 3.24
1411 1533 7.673926 ACAAAATTCCAGTGATGGTTAAGGTAT 59.326 33.333 0.00 0.00 0.00 2.73
1413 1535 5.838521 ACAAAATTCCAGTGATGGTTAAGGT 59.161 36.000 0.00 0.00 0.00 3.50
1417 1539 5.600484 ACCAACAAAATTCCAGTGATGGTTA 59.400 36.000 0.00 0.00 43.54 2.85
1440 1562 8.312762 GCCAGTGCACATCTAACAGAATGTAC 62.313 46.154 21.04 0.00 43.95 2.90
1441 1563 6.369428 GCCAGTGCACATCTAACAGAATGTA 61.369 44.000 21.04 0.00 43.95 2.29
1442 1564 5.634282 GCCAGTGCACATCTAACAGAATGT 61.634 45.833 21.04 0.00 46.01 2.71
1443 1565 3.181503 GCCAGTGCACATCTAACAGAATG 60.182 47.826 21.04 3.40 39.08 2.67
1446 1568 1.347378 TGCCAGTGCACATCTAACAGA 59.653 47.619 21.04 0.00 44.23 3.41
1461 1583 5.645067 CCAATAGTACATGACCATATGCCAG 59.355 44.000 0.00 0.00 0.00 4.85
1462 1584 5.514659 CCCAATAGTACATGACCATATGCCA 60.515 44.000 0.00 0.00 0.00 4.92
1463 1585 4.943705 CCCAATAGTACATGACCATATGCC 59.056 45.833 0.00 0.00 0.00 4.40
1464 1586 5.804639 TCCCAATAGTACATGACCATATGC 58.195 41.667 0.00 0.00 0.00 3.14
1465 1587 7.335171 CACATCCCAATAGTACATGACCATATG 59.665 40.741 0.00 0.00 0.00 1.78
1466 1588 7.397221 CACATCCCAATAGTACATGACCATAT 58.603 38.462 0.00 0.00 0.00 1.78
1467 1589 6.744056 GCACATCCCAATAGTACATGACCATA 60.744 42.308 0.00 0.00 0.00 2.74
1468 1590 5.624159 CACATCCCAATAGTACATGACCAT 58.376 41.667 0.00 0.00 0.00 3.55
1470 1592 3.815401 GCACATCCCAATAGTACATGACC 59.185 47.826 0.00 0.00 0.00 4.02
1472 1594 4.769345 TGCACATCCCAATAGTACATGA 57.231 40.909 0.00 0.00 0.00 3.07
1473 1595 4.216902 CCATGCACATCCCAATAGTACATG 59.783 45.833 0.00 0.00 36.98 3.21
1474 1596 4.401022 CCATGCACATCCCAATAGTACAT 58.599 43.478 0.00 0.00 0.00 2.29
1475 1597 3.819368 CCATGCACATCCCAATAGTACA 58.181 45.455 0.00 0.00 0.00 2.90
1476 1598 2.554032 GCCATGCACATCCCAATAGTAC 59.446 50.000 0.00 0.00 0.00 2.73
1477 1599 2.488891 GGCCATGCACATCCCAATAGTA 60.489 50.000 0.00 0.00 0.00 1.82
1478 1600 1.696063 GCCATGCACATCCCAATAGT 58.304 50.000 0.00 0.00 0.00 2.12
1479 1601 0.963962 GGCCATGCACATCCCAATAG 59.036 55.000 0.00 0.00 0.00 1.73
1480 1602 0.261109 TGGCCATGCACATCCCAATA 59.739 50.000 0.00 0.00 0.00 1.90
1481 1603 0.399376 ATGGCCATGCACATCCCAAT 60.399 50.000 20.04 0.00 0.00 3.16
1482 1604 1.001888 ATGGCCATGCACATCCCAA 59.998 52.632 20.04 0.00 0.00 4.12
1483 1605 1.758906 CATGGCCATGCACATCCCA 60.759 57.895 31.95 0.00 31.39 4.37
1484 1606 1.332144 AACATGGCCATGCACATCCC 61.332 55.000 39.74 0.00 42.39 3.85
1485 1607 1.401761 TAACATGGCCATGCACATCC 58.598 50.000 39.74 0.00 42.39 3.51
1486 1608 3.068448 TCAATAACATGGCCATGCACATC 59.932 43.478 39.74 0.00 42.39 3.06
1487 1609 3.032459 TCAATAACATGGCCATGCACAT 58.968 40.909 39.74 27.64 42.39 3.21
1488 1610 2.454538 TCAATAACATGGCCATGCACA 58.545 42.857 39.74 26.77 42.39 4.57
1489 1611 3.523606 TTCAATAACATGGCCATGCAC 57.476 42.857 39.74 0.00 42.39 4.57
1490 1612 4.081031 ACAATTCAATAACATGGCCATGCA 60.081 37.500 39.74 29.47 42.39 3.96
1491 1613 4.271533 CACAATTCAATAACATGGCCATGC 59.728 41.667 39.74 0.00 42.39 4.06
1492 1614 5.421277 ACACAATTCAATAACATGGCCATG 58.579 37.500 38.53 38.53 44.15 3.66
1493 1615 5.680594 ACACAATTCAATAACATGGCCAT 57.319 34.783 14.09 14.09 0.00 4.40
1494 1616 5.948758 TCTACACAATTCAATAACATGGCCA 59.051 36.000 8.56 8.56 0.00 5.36
1495 1617 6.127758 TGTCTACACAATTCAATAACATGGCC 60.128 38.462 0.00 0.00 0.00 5.36
1496 1618 6.851609 TGTCTACACAATTCAATAACATGGC 58.148 36.000 0.00 0.00 0.00 4.40
1497 1619 8.044060 ACTGTCTACACAATTCAATAACATGG 57.956 34.615 0.00 0.00 29.82 3.66
1500 1622 9.161629 CCATACTGTCTACACAATTCAATAACA 57.838 33.333 0.00 0.00 29.82 2.41
1501 1623 9.378551 TCCATACTGTCTACACAATTCAATAAC 57.621 33.333 0.00 0.00 29.82 1.89
1502 1624 9.599866 CTCCATACTGTCTACACAATTCAATAA 57.400 33.333 0.00 0.00 29.82 1.40
1505 1627 7.239763 TCTCCATACTGTCTACACAATTCAA 57.760 36.000 0.00 0.00 29.82 2.69
1517 1639 4.389077 CACCGAACTTTTCTCCATACTGTC 59.611 45.833 0.00 0.00 0.00 3.51
1523 1645 4.062991 GTGTACACCGAACTTTTCTCCAT 58.937 43.478 15.42 0.00 0.00 3.41
1538 1662 4.315803 ACAAATCTACAGCAGGTGTACAC 58.684 43.478 18.01 18.01 40.94 2.90
1541 1665 5.715279 AGTCTACAAATCTACAGCAGGTGTA 59.285 40.000 11.94 11.94 40.94 2.90
1545 1669 6.253727 CGTAAAGTCTACAAATCTACAGCAGG 59.746 42.308 0.00 0.00 0.00 4.85
1546 1670 6.237595 GCGTAAAGTCTACAAATCTACAGCAG 60.238 42.308 0.00 0.00 0.00 4.24
1547 1671 5.575606 GCGTAAAGTCTACAAATCTACAGCA 59.424 40.000 0.00 0.00 0.00 4.41
1553 1677 6.921914 ACTACAGCGTAAAGTCTACAAATCT 58.078 36.000 0.00 0.00 0.00 2.40
1568 1692 3.868757 TTCTTGAGCATACTACAGCGT 57.131 42.857 0.00 0.00 35.48 5.07
1569 1693 4.033358 CCTTTTCTTGAGCATACTACAGCG 59.967 45.833 0.00 0.00 35.48 5.18
1570 1694 4.938226 ACCTTTTCTTGAGCATACTACAGC 59.062 41.667 0.00 0.00 0.00 4.40
1571 1695 5.352569 CCACCTTTTCTTGAGCATACTACAG 59.647 44.000 0.00 0.00 0.00 2.74
1574 1698 4.019321 AGCCACCTTTTCTTGAGCATACTA 60.019 41.667 0.00 0.00 0.00 1.82
1576 1700 3.084786 AGCCACCTTTTCTTGAGCATAC 58.915 45.455 0.00 0.00 0.00 2.39
1581 1705 2.586425 TCCAAGCCACCTTTTCTTGAG 58.414 47.619 3.09 0.00 39.48 3.02
1582 1706 2.746279 TCCAAGCCACCTTTTCTTGA 57.254 45.000 3.09 0.00 39.48 3.02
1583 1707 4.341366 AAATCCAAGCCACCTTTTCTTG 57.659 40.909 0.00 0.00 37.52 3.02
1584 1708 4.021104 GCTAAATCCAAGCCACCTTTTCTT 60.021 41.667 0.00 0.00 33.73 2.52
1586 1710 3.258123 TGCTAAATCCAAGCCACCTTTTC 59.742 43.478 0.00 0.00 39.30 2.29
1587 1711 3.238597 TGCTAAATCCAAGCCACCTTTT 58.761 40.909 0.00 0.00 39.30 2.27
1589 1713 2.225117 ACTGCTAAATCCAAGCCACCTT 60.225 45.455 0.00 0.00 39.30 3.50
1590 1714 1.355720 ACTGCTAAATCCAAGCCACCT 59.644 47.619 0.00 0.00 39.30 4.00
1591 1715 1.745653 GACTGCTAAATCCAAGCCACC 59.254 52.381 0.00 0.00 39.30 4.61
1611 1945 5.415701 ACAACAGGAAACTAGGCATAATGTG 59.584 40.000 0.00 0.00 40.21 3.21
1612 1946 5.570320 ACAACAGGAAACTAGGCATAATGT 58.430 37.500 0.00 0.00 40.21 2.71
1627 1961 4.600111 AGAAATACTACCCCAACAACAGGA 59.400 41.667 0.00 0.00 0.00 3.86
1632 1967 6.184789 GGATCAAGAAATACTACCCCAACAA 58.815 40.000 0.00 0.00 0.00 2.83
1640 1975 5.703130 GGAGGCATGGATCAAGAAATACTAC 59.297 44.000 0.00 0.00 0.00 2.73
1655 1990 0.971386 AAAAGCAACTGGAGGCATGG 59.029 50.000 0.00 0.00 0.00 3.66
1669 2004 2.919229 CGTGAATCTGATGGCAAAAAGC 59.081 45.455 0.00 0.00 44.65 3.51
1672 2007 4.545610 GTTTCGTGAATCTGATGGCAAAA 58.454 39.130 0.00 0.00 0.00 2.44
1673 2008 3.057596 GGTTTCGTGAATCTGATGGCAAA 60.058 43.478 0.00 0.00 0.00 3.68
1674 2009 2.487762 GGTTTCGTGAATCTGATGGCAA 59.512 45.455 0.00 0.00 0.00 4.52
1677 2029 3.599343 TCAGGTTTCGTGAATCTGATGG 58.401 45.455 11.43 0.00 31.14 3.51
1689 2041 6.589523 TGCCAAAATCATAAATTCAGGTTTCG 59.410 34.615 0.00 0.00 0.00 3.46
1706 2058 9.060347 CACATCTATGAGTTACTATGCCAAAAT 57.940 33.333 0.00 0.00 0.00 1.82
1711 2082 8.715998 CAAATCACATCTATGAGTTACTATGCC 58.284 37.037 0.00 0.00 34.82 4.40
1712 2083 8.715998 CCAAATCACATCTATGAGTTACTATGC 58.284 37.037 0.00 0.00 34.82 3.14
1744 2125 1.081892 CATGGTGTGCTACTGTGCTC 58.918 55.000 0.00 0.00 0.00 4.26
1757 2138 1.556911 AGAGTAACTGGAGGCATGGTG 59.443 52.381 0.00 0.00 0.00 4.17
1769 2150 3.626670 CGAGGAATGACGGTAGAGTAACT 59.373 47.826 0.00 0.00 0.00 2.24
1779 2160 0.459899 TGATGGTCGAGGAATGACGG 59.540 55.000 0.00 0.00 37.22 4.79
1780 2161 1.135139 AGTGATGGTCGAGGAATGACG 59.865 52.381 0.00 0.00 37.22 4.35
1787 2170 2.698855 AATTCCAGTGATGGTCGAGG 57.301 50.000 0.00 0.00 0.00 4.63
1790 2173 3.620374 CAGAGAAATTCCAGTGATGGTCG 59.380 47.826 0.00 0.00 0.00 4.79
1791 2174 3.944015 CCAGAGAAATTCCAGTGATGGTC 59.056 47.826 0.00 0.00 0.00 4.02
1797 2180 4.878397 GGATGTACCAGAGAAATTCCAGTG 59.122 45.833 0.00 0.00 38.79 3.66
1798 2181 4.383118 CGGATGTACCAGAGAAATTCCAGT 60.383 45.833 0.00 0.00 38.90 4.00
1802 2185 3.871594 CACCGGATGTACCAGAGAAATTC 59.128 47.826 9.46 0.00 38.90 2.17
1856 2242 2.438975 CATGGCCGTGCACATCCT 60.439 61.111 18.64 4.38 0.00 3.24
1897 2284 3.376859 CACTGGTCTTTTAACTGCACACA 59.623 43.478 0.00 0.00 0.00 3.72
1913 2300 0.034756 TACAGCGCATGTTCACTGGT 59.965 50.000 11.47 0.00 39.96 4.00
1938 2325 6.015519 TGCTAAGTTTAGTACGGTAAGTCCAA 60.016 38.462 1.28 0.00 32.81 3.53
1940 2327 5.802451 GTGCTAAGTTTAGTACGGTAAGTCC 59.198 44.000 4.72 0.00 36.81 3.85
1946 2333 4.605640 TTGGTGCTAAGTTTAGTACGGT 57.394 40.909 12.05 0.00 44.21 4.83
1947 2334 7.599630 TTTATTGGTGCTAAGTTTAGTACGG 57.400 36.000 12.05 0.00 44.21 4.02
1974 2391 6.080406 GCAAAGTCTACAAATCTACACTTGC 58.920 40.000 0.00 0.00 0.00 4.01
1975 2392 7.189693 TGCAAAGTCTACAAATCTACACTTG 57.810 36.000 0.00 0.00 0.00 3.16
2020 2441 5.293560 CCTAAAGAGCTGCTGGTTATAGTC 58.706 45.833 7.01 0.00 0.00 2.59
2021 2442 4.443598 GCCTAAAGAGCTGCTGGTTATAGT 60.444 45.833 7.01 0.00 0.00 2.12
2035 2490 2.601481 CAAACGTGCTGCCTAAAGAG 57.399 50.000 0.00 0.00 0.00 2.85
2050 2505 4.386652 CAGCATAACATGTTCCAAGCAAAC 59.613 41.667 15.85 0.00 0.00 2.93
2076 2578 0.109643 GCATGCGCATGTGAAACTGA 60.110 50.000 41.40 5.10 40.80 3.41
2143 2645 2.571212 CGCTTTATGCCCACAGGAATA 58.429 47.619 0.00 0.00 38.78 1.75
2162 2664 1.139947 GAGGAGCGAAGGACTTCCG 59.860 63.158 6.49 3.64 42.08 4.30
2179 2681 3.071023 CAGTAGTCCCAAAGAACACCAGA 59.929 47.826 0.00 0.00 0.00 3.86
2194 2696 5.073311 TGTCAAGCATAGTTCCAGTAGTC 57.927 43.478 0.00 0.00 0.00 2.59
2347 2849 0.529378 GCCAGGCCAGATTTCACTTG 59.471 55.000 5.01 0.00 0.00 3.16
2357 2859 4.974721 AAACCCACGCCAGGCCAG 62.975 66.667 5.01 0.00 0.00 4.85
2360 2862 1.744320 AAAGAAAACCCACGCCAGGC 61.744 55.000 0.00 0.00 0.00 4.85
2366 2868 4.537015 GAGTTCATGAAAGAAAACCCACG 58.463 43.478 10.35 0.00 0.00 4.94
2397 2902 4.039004 TGTTTCCAAAGGACCATGACAATG 59.961 41.667 0.00 0.00 0.00 2.82
2454 2960 1.462283 CTCACAGTGACCATTGCTTCG 59.538 52.381 0.00 0.00 0.00 3.79
2468 2974 7.700234 GTCATCTTGACTAATACTGACTCACAG 59.300 40.741 0.45 0.00 45.96 3.66
2496 3002 3.017442 GGGACTTAGATGGCCTTTCAAC 58.983 50.000 3.32 0.00 0.00 3.18
2498 3004 2.562296 AGGGACTTAGATGGCCTTTCA 58.438 47.619 3.32 0.00 27.25 2.69
2509 3015 5.186198 CCCAAGAACACATTAGGGACTTAG 58.814 45.833 0.00 0.00 41.75 2.18
2511 3017 3.245264 CCCCAAGAACACATTAGGGACTT 60.245 47.826 0.00 0.00 41.75 3.01
2543 3049 6.668541 AATCGTTAGTCCAACAGAATCATG 57.331 37.500 0.00 0.00 36.92 3.07
2544 3050 8.786826 TTAAATCGTTAGTCCAACAGAATCAT 57.213 30.769 0.00 0.00 36.92 2.45
2550 3056 8.251750 TCTCAATTAAATCGTTAGTCCAACAG 57.748 34.615 0.00 0.00 36.92 3.16
2583 3089 6.409695 CCTGACCCAATGGACTAAATATCTGT 60.410 42.308 0.00 0.00 34.81 3.41
2617 3123 8.454106 AGAAAACGAAATCAGATTAATGAGTGG 58.546 33.333 0.00 0.00 31.44 4.00
2630 3136 6.202516 AGGACACAAAAGAAAACGAAATCA 57.797 33.333 0.00 0.00 0.00 2.57
2631 3137 7.253983 GGAAAGGACACAAAAGAAAACGAAATC 60.254 37.037 0.00 0.00 0.00 2.17
2636 3142 4.739195 TGGAAAGGACACAAAAGAAAACG 58.261 39.130 0.00 0.00 0.00 3.60
2637 3143 6.647212 CTTGGAAAGGACACAAAAGAAAAC 57.353 37.500 0.00 0.00 41.27 2.43
2659 3165 6.715264 CCAGATTAAGACACACCCTTAAAACT 59.285 38.462 0.00 0.00 38.92 2.66
2679 3185 8.206126 AGTGGGAATAAAATGAAAAACCAGAT 57.794 30.769 0.00 0.00 0.00 2.90
2680 3186 7.610580 AGTGGGAATAAAATGAAAAACCAGA 57.389 32.000 0.00 0.00 0.00 3.86
2681 3187 8.150296 AGAAGTGGGAATAAAATGAAAAACCAG 58.850 33.333 0.00 0.00 0.00 4.00
2682 3188 8.028652 AGAAGTGGGAATAAAATGAAAAACCA 57.971 30.769 0.00 0.00 0.00 3.67
2699 3217 6.743575 ACGAAATGAAAAGATAGAAGTGGG 57.256 37.500 0.00 0.00 0.00 4.61
2700 3218 8.507249 AGAAACGAAATGAAAAGATAGAAGTGG 58.493 33.333 0.00 0.00 0.00 4.00
2703 3221 9.548208 GGAAGAAACGAAATGAAAAGATAGAAG 57.452 33.333 0.00 0.00 0.00 2.85
2706 3237 7.965107 CCTGGAAGAAACGAAATGAAAAGATAG 59.035 37.037 0.00 0.00 34.07 2.08
2708 3239 6.265422 ACCTGGAAGAAACGAAATGAAAAGAT 59.735 34.615 0.00 0.00 34.07 2.40
2714 3245 5.845391 AAAACCTGGAAGAAACGAAATGA 57.155 34.783 0.00 0.00 34.07 2.57
2749 3280 1.610363 TCACCACTGCGCCATAAAAA 58.390 45.000 4.18 0.00 0.00 1.94
2750 3281 1.539388 CTTCACCACTGCGCCATAAAA 59.461 47.619 4.18 0.00 0.00 1.52
2751 3282 1.164411 CTTCACCACTGCGCCATAAA 58.836 50.000 4.18 0.00 0.00 1.40
2752 3283 0.036164 ACTTCACCACTGCGCCATAA 59.964 50.000 4.18 0.00 0.00 1.90
2753 3284 0.391130 GACTTCACCACTGCGCCATA 60.391 55.000 4.18 0.00 0.00 2.74
2754 3285 1.672356 GACTTCACCACTGCGCCAT 60.672 57.895 4.18 0.00 0.00 4.40
2755 3286 2.280797 GACTTCACCACTGCGCCA 60.281 61.111 4.18 0.00 0.00 5.69
2756 3287 3.050275 GGACTTCACCACTGCGCC 61.050 66.667 4.18 0.00 0.00 6.53
2757 3288 2.029844 GAGGACTTCACCACTGCGC 61.030 63.158 0.00 0.00 0.00 6.09
2758 3289 1.374758 GGAGGACTTCACCACTGCG 60.375 63.158 0.00 0.00 0.00 5.18
2759 3290 1.003233 GGGAGGACTTCACCACTGC 60.003 63.158 0.00 0.00 0.00 4.40
2765 3296 0.765510 ACAAGTGGGGAGGACTTCAC 59.234 55.000 0.00 0.00 31.05 3.18
2766 3297 0.764890 CACAAGTGGGGAGGACTTCA 59.235 55.000 0.00 0.00 31.05 3.02
2767 3298 0.606673 GCACAAGTGGGGAGGACTTC 60.607 60.000 2.00 0.00 31.05 3.01
2768 3299 1.456287 GCACAAGTGGGGAGGACTT 59.544 57.895 2.00 0.00 33.82 3.01
2769 3300 2.529744 GGCACAAGTGGGGAGGACT 61.530 63.158 2.00 0.00 0.00 3.85
2770 3301 2.034221 GGCACAAGTGGGGAGGAC 59.966 66.667 2.00 0.00 0.00 3.85
2771 3302 2.449518 TGGCACAAGTGGGGAGGA 60.450 61.111 2.00 0.00 31.92 3.71
2782 3313 2.431683 GCAGGACCTCTTGGCACA 59.568 61.111 0.00 0.00 36.63 4.57
2783 3314 2.743928 CGCAGGACCTCTTGGCAC 60.744 66.667 0.00 0.00 36.63 5.01
2784 3315 2.731691 GAACGCAGGACCTCTTGGCA 62.732 60.000 0.00 0.00 36.63 4.92
2785 3316 2.032681 AACGCAGGACCTCTTGGC 59.967 61.111 0.00 0.00 36.63 4.52
2786 3317 1.738099 CGAACGCAGGACCTCTTGG 60.738 63.158 0.00 0.00 39.83 3.61
2787 3318 0.319555 TTCGAACGCAGGACCTCTTG 60.320 55.000 0.00 0.00 0.00 3.02
2788 3319 0.319641 GTTCGAACGCAGGACCTCTT 60.320 55.000 13.36 0.00 0.00 2.85
2789 3320 1.289380 GTTCGAACGCAGGACCTCT 59.711 57.895 13.36 0.00 0.00 3.69
2790 3321 1.737008 GGTTCGAACGCAGGACCTC 60.737 63.158 21.34 1.08 0.00 3.85
2791 3322 2.342648 GGTTCGAACGCAGGACCT 59.657 61.111 21.34 0.00 0.00 3.85
2792 3323 2.027625 CTGGTTCGAACGCAGGACC 61.028 63.158 26.31 13.87 0.00 4.46
2793 3324 2.668280 GCTGGTTCGAACGCAGGAC 61.668 63.158 30.69 19.71 31.84 3.85
2794 3325 2.357034 GCTGGTTCGAACGCAGGA 60.357 61.111 30.69 12.75 31.84 3.86
2795 3326 3.423154 GGCTGGTTCGAACGCAGG 61.423 66.667 30.69 19.29 31.84 4.85
2796 3327 2.357517 AGGCTGGTTCGAACGCAG 60.358 61.111 28.15 28.15 33.29 5.18
2797 3328 2.357034 GAGGCTGGTTCGAACGCA 60.357 61.111 23.58 19.58 0.00 5.24
2798 3329 2.048127 AGAGGCTGGTTCGAACGC 60.048 61.111 21.34 18.91 0.00 4.84
2799 3330 0.734253 CAGAGAGGCTGGTTCGAACG 60.734 60.000 21.34 10.26 41.07 3.95
2800 3331 1.016653 GCAGAGAGGCTGGTTCGAAC 61.017 60.000 20.14 20.14 45.03 3.95
2801 3332 1.293498 GCAGAGAGGCTGGTTCGAA 59.707 57.895 0.00 0.00 45.03 3.71
2802 3333 1.260538 ATGCAGAGAGGCTGGTTCGA 61.261 55.000 0.00 0.00 45.03 3.71
2803 3334 0.392193 AATGCAGAGAGGCTGGTTCG 60.392 55.000 0.00 0.00 45.03 3.95
2804 3335 1.093159 CAATGCAGAGAGGCTGGTTC 58.907 55.000 0.00 0.00 45.03 3.62
2805 3336 0.964358 GCAATGCAGAGAGGCTGGTT 60.964 55.000 0.00 0.00 45.03 3.67
2806 3337 1.378250 GCAATGCAGAGAGGCTGGT 60.378 57.895 0.00 0.00 45.03 4.00
2807 3338 1.378119 TGCAATGCAGAGAGGCTGG 60.378 57.895 2.72 0.00 45.03 4.85
2809 3340 0.037877 AAGTGCAATGCAGAGAGGCT 59.962 50.000 8.73 0.00 40.08 4.58
2810 3341 0.886563 AAAGTGCAATGCAGAGAGGC 59.113 50.000 8.73 0.00 40.08 4.70
2811 3342 1.402456 GCAAAGTGCAATGCAGAGAGG 60.402 52.381 8.73 0.00 44.26 3.69
2812 3343 1.978542 GCAAAGTGCAATGCAGAGAG 58.021 50.000 8.73 0.33 44.26 3.20
2823 3354 0.881796 GTCTTACCCCTGCAAAGTGC 59.118 55.000 0.00 0.00 45.29 4.40
2824 3355 2.568623 AGTCTTACCCCTGCAAAGTG 57.431 50.000 0.00 0.00 0.00 3.16
2825 3356 2.572104 CCTAGTCTTACCCCTGCAAAGT 59.428 50.000 0.00 0.00 0.00 2.66
2826 3357 2.572104 ACCTAGTCTTACCCCTGCAAAG 59.428 50.000 0.00 0.00 0.00 2.77
2827 3358 2.627933 ACCTAGTCTTACCCCTGCAAA 58.372 47.619 0.00 0.00 0.00 3.68
2828 3359 2.337359 ACCTAGTCTTACCCCTGCAA 57.663 50.000 0.00 0.00 0.00 4.08
2829 3360 2.185387 GAACCTAGTCTTACCCCTGCA 58.815 52.381 0.00 0.00 0.00 4.41
2830 3361 1.485480 GGAACCTAGTCTTACCCCTGC 59.515 57.143 0.00 0.00 0.00 4.85
2831 3362 3.117552 AGGAACCTAGTCTTACCCCTG 57.882 52.381 0.00 0.00 0.00 4.45
2832 3363 6.618836 TTATAGGAACCTAGTCTTACCCCT 57.381 41.667 6.72 0.00 31.45 4.79
2833 3364 6.440010 GGATTATAGGAACCTAGTCTTACCCC 59.560 46.154 6.72 0.00 31.45 4.95
2834 3365 6.440010 GGGATTATAGGAACCTAGTCTTACCC 59.560 46.154 6.72 9.62 31.45 3.69
2835 3366 7.247500 AGGGATTATAGGAACCTAGTCTTACC 58.753 42.308 6.72 4.95 31.45 2.85
2836 3367 7.396907 GGAGGGATTATAGGAACCTAGTCTTAC 59.603 44.444 6.72 0.00 31.45 2.34
2837 3368 7.477008 GGAGGGATTATAGGAACCTAGTCTTA 58.523 42.308 6.72 0.00 31.45 2.10
2838 3369 6.324544 GGAGGGATTATAGGAACCTAGTCTT 58.675 44.000 6.72 0.00 31.45 3.01
2839 3370 5.222589 GGGAGGGATTATAGGAACCTAGTCT 60.223 48.000 6.72 0.00 31.45 3.24
2840 3371 5.024785 GGGAGGGATTATAGGAACCTAGTC 58.975 50.000 6.72 4.93 31.45 2.59
2841 3372 4.202912 GGGGAGGGATTATAGGAACCTAGT 60.203 50.000 6.72 0.00 31.45 2.57
2842 3373 4.202901 TGGGGAGGGATTATAGGAACCTAG 60.203 50.000 6.72 0.00 31.45 3.02
2843 3374 3.741438 TGGGGAGGGATTATAGGAACCTA 59.259 47.826 2.93 2.93 0.00 3.08
2844 3375 2.531463 TGGGGAGGGATTATAGGAACCT 59.469 50.000 0.00 0.00 0.00 3.50
2845 3376 2.913617 CTGGGGAGGGATTATAGGAACC 59.086 54.545 0.00 0.00 0.00 3.62
2846 3377 3.583526 GTCTGGGGAGGGATTATAGGAAC 59.416 52.174 0.00 0.00 0.00 3.62
2847 3378 3.441054 GGTCTGGGGAGGGATTATAGGAA 60.441 52.174 0.00 0.00 0.00 3.36
2848 3379 2.113777 GGTCTGGGGAGGGATTATAGGA 59.886 54.545 0.00 0.00 0.00 2.94
2849 3380 2.552367 GGTCTGGGGAGGGATTATAGG 58.448 57.143 0.00 0.00 0.00 2.57
2850 3381 2.552367 GGGTCTGGGGAGGGATTATAG 58.448 57.143 0.00 0.00 0.00 1.31
2851 3382 1.153565 GGGGTCTGGGGAGGGATTATA 59.846 57.143 0.00 0.00 0.00 0.98
2852 3383 0.103876 GGGGTCTGGGGAGGGATTAT 60.104 60.000 0.00 0.00 0.00 1.28
2853 3384 1.320512 GGGGTCTGGGGAGGGATTA 59.679 63.158 0.00 0.00 0.00 1.75
2854 3385 2.044620 GGGGTCTGGGGAGGGATT 59.955 66.667 0.00 0.00 0.00 3.01
2855 3386 3.300962 TGGGGTCTGGGGAGGGAT 61.301 66.667 0.00 0.00 0.00 3.85
2856 3387 4.348495 GTGGGGTCTGGGGAGGGA 62.348 72.222 0.00 0.00 0.00 4.20
2858 3389 3.891432 AAGGTGGGGTCTGGGGAGG 62.891 68.421 0.00 0.00 0.00 4.30
2859 3390 2.204151 AAGGTGGGGTCTGGGGAG 60.204 66.667 0.00 0.00 0.00 4.30
2860 3391 2.531685 CAAGGTGGGGTCTGGGGA 60.532 66.667 0.00 0.00 0.00 4.81
2861 3392 2.858974 ACAAGGTGGGGTCTGGGG 60.859 66.667 0.00 0.00 0.00 4.96
2862 3393 2.436109 CACAAGGTGGGGTCTGGG 59.564 66.667 0.00 0.00 0.00 4.45
2863 3394 1.228245 CACACAAGGTGGGGTCTGG 60.228 63.158 1.07 0.00 44.04 3.86
2864 3395 4.481195 CACACAAGGTGGGGTCTG 57.519 61.111 1.07 0.00 44.04 3.51
2872 3403 1.729586 TAGAAGCTCCCACACAAGGT 58.270 50.000 0.00 0.00 0.00 3.50
2873 3404 2.636830 CATAGAAGCTCCCACACAAGG 58.363 52.381 0.00 0.00 0.00 3.61
2874 3405 2.012673 GCATAGAAGCTCCCACACAAG 58.987 52.381 0.00 0.00 0.00 3.16
2875 3406 1.350684 TGCATAGAAGCTCCCACACAA 59.649 47.619 0.00 0.00 34.99 3.33
2876 3407 0.983467 TGCATAGAAGCTCCCACACA 59.017 50.000 0.00 0.00 34.99 3.72
2877 3408 1.065854 AGTGCATAGAAGCTCCCACAC 60.066 52.381 0.00 0.00 34.99 3.82
2878 3409 1.065926 CAGTGCATAGAAGCTCCCACA 60.066 52.381 0.00 0.00 34.99 4.17
2879 3410 1.661341 CAGTGCATAGAAGCTCCCAC 58.339 55.000 0.00 0.00 34.99 4.61
2880 3411 0.543277 CCAGTGCATAGAAGCTCCCA 59.457 55.000 0.00 0.00 34.99 4.37
2881 3412 0.179034 CCCAGTGCATAGAAGCTCCC 60.179 60.000 0.00 0.00 34.99 4.30
2882 3413 0.543749 ACCCAGTGCATAGAAGCTCC 59.456 55.000 0.00 0.00 34.99 4.70
2883 3414 1.484240 AGACCCAGTGCATAGAAGCTC 59.516 52.381 0.00 0.00 34.99 4.09
2884 3415 1.209019 CAGACCCAGTGCATAGAAGCT 59.791 52.381 0.00 0.00 34.99 3.74
2885 3416 1.065854 ACAGACCCAGTGCATAGAAGC 60.066 52.381 0.00 0.00 0.00 3.86
2886 3417 2.419297 GGACAGACCCAGTGCATAGAAG 60.419 54.545 0.00 0.00 0.00 2.85
2887 3418 1.555075 GGACAGACCCAGTGCATAGAA 59.445 52.381 0.00 0.00 0.00 2.10
2888 3419 1.195115 GGACAGACCCAGTGCATAGA 58.805 55.000 0.00 0.00 0.00 1.98
2889 3420 1.198713 AGGACAGACCCAGTGCATAG 58.801 55.000 0.00 0.00 40.05 2.23
2890 3421 2.543037 TAGGACAGACCCAGTGCATA 57.457 50.000 0.00 0.00 40.05 3.14
2891 3422 1.765314 GATAGGACAGACCCAGTGCAT 59.235 52.381 0.00 0.00 40.05 3.96
2892 3423 1.195115 GATAGGACAGACCCAGTGCA 58.805 55.000 0.00 0.00 40.05 4.57
2893 3424 1.490574 AGATAGGACAGACCCAGTGC 58.509 55.000 0.00 0.00 40.05 4.40
2894 3425 4.559862 AAAAGATAGGACAGACCCAGTG 57.440 45.455 0.00 0.00 40.05 3.66
2919 3450 9.959749 GTGGGCGAAAAATATTATAGATGAAAA 57.040 29.630 0.00 0.00 0.00 2.29
3009 3583 2.483583 TTGTGTGCGGAAACATCAAC 57.516 45.000 0.00 0.00 31.49 3.18
3011 3585 1.745653 TGTTTGTGTGCGGAAACATCA 59.254 42.857 0.00 1.13 37.19 3.07
3012 3586 2.223479 ACTGTTTGTGTGCGGAAACATC 60.223 45.455 0.00 0.00 40.38 3.06
3013 3587 1.748493 ACTGTTTGTGTGCGGAAACAT 59.252 42.857 0.00 0.00 40.38 2.71
3014 3588 1.169577 ACTGTTTGTGTGCGGAAACA 58.830 45.000 0.00 0.00 39.24 2.83
3015 3589 2.271821 AACTGTTTGTGTGCGGAAAC 57.728 45.000 0.00 0.00 33.48 2.78
3126 3747 0.875728 CACGGCCGAAATACCACAAA 59.124 50.000 35.90 0.00 0.00 2.83
3169 3790 4.137543 GGCCTCTATGGACACAATTTAGG 58.862 47.826 0.00 0.00 45.54 2.69
3179 3800 1.070914 GTTAGCTGGGCCTCTATGGAC 59.929 57.143 4.53 0.00 45.48 4.02
3180 3801 1.424638 GTTAGCTGGGCCTCTATGGA 58.575 55.000 4.53 0.00 38.35 3.41
3181 3802 0.398318 GGTTAGCTGGGCCTCTATGG 59.602 60.000 4.53 0.00 39.35 2.74
3182 3803 1.071385 CAGGTTAGCTGGGCCTCTATG 59.929 57.143 4.53 0.00 0.00 2.23
3183 3804 1.428869 CAGGTTAGCTGGGCCTCTAT 58.571 55.000 4.53 0.00 0.00 1.98
3184 3805 1.338136 GCAGGTTAGCTGGGCCTCTA 61.338 60.000 13.50 3.37 0.00 2.43
3185 3806 2.674220 GCAGGTTAGCTGGGCCTCT 61.674 63.158 13.50 4.47 0.00 3.69
3186 3807 2.124529 GCAGGTTAGCTGGGCCTC 60.125 66.667 13.50 0.00 0.00 4.70
3187 3808 2.935481 TGCAGGTTAGCTGGGCCT 60.935 61.111 13.50 0.00 34.99 5.19
3188 3809 2.751837 GTGCAGGTTAGCTGGGCC 60.752 66.667 13.50 0.00 34.99 5.80
3189 3810 3.127533 CGTGCAGGTTAGCTGGGC 61.128 66.667 13.50 0.04 34.99 5.36
3190 3811 2.436646 CCGTGCAGGTTAGCTGGG 60.437 66.667 13.50 2.32 34.99 4.45
3191 3812 1.741770 GTCCGTGCAGGTTAGCTGG 60.742 63.158 13.50 0.00 41.99 4.85
3201 3822 4.966787 GGGCTTTGGGTCCGTGCA 62.967 66.667 0.00 0.00 0.00 4.57
3206 3827 2.997315 GGCTTGGGCTTTGGGTCC 60.997 66.667 0.00 0.00 40.85 4.46
3225 3846 3.794564 GTCACATTCGTTGGGTTTTTGAC 59.205 43.478 0.00 0.00 0.00 3.18
3234 3855 5.123820 AGGAAATATGTGTCACATTCGTTGG 59.876 40.000 23.05 0.00 39.88 3.77


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.