Multiple sequence alignment - TraesCS7B01G356900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G356900 chr7B 100.000 4832 0 0 1 4832 617563763 617558932 0.000000e+00 8924.0
1 TraesCS7B01G356900 chr7B 94.643 56 3 0 1 56 617781172 617781117 2.400000e-13 87.9
2 TraesCS7B01G356900 chr7D 88.935 3380 153 73 511 3759 566021851 566018562 0.000000e+00 3965.0
3 TraesCS7B01G356900 chr7D 84.667 450 44 14 3770 4210 566018524 566018091 4.470000e-115 425.0
4 TraesCS7B01G356900 chr7D 87.719 228 24 1 4322 4545 566017542 566017315 3.710000e-66 263.0
5 TraesCS7B01G356900 chr7D 90.909 99 2 2 4235 4326 566018023 566017925 5.080000e-25 126.0
6 TraesCS7B01G356900 chr7D 87.805 82 10 0 4150 4231 463263152 463263071 3.980000e-16 97.1
7 TraesCS7B01G356900 chr7A 89.914 2211 106 50 614 2808 652293771 652291662 0.000000e+00 2739.0
8 TraesCS7B01G356900 chr7A 84.872 899 66 27 3770 4616 652290916 652290036 0.000000e+00 843.0
9 TraesCS7B01G356900 chr7A 91.297 609 48 2 3066 3670 652291632 652291025 0.000000e+00 826.0
10 TraesCS7B01G356900 chr7A 81.292 449 43 24 500 909 652293918 652293472 4.660000e-85 326.0
11 TraesCS7B01G356900 chr7A 86.885 244 25 6 198 441 652298916 652298680 2.870000e-67 267.0
12 TraesCS7B01G356900 chr7A 90.840 131 11 1 1 130 652299247 652299117 1.790000e-39 174.0
13 TraesCS7B01G356900 chr7A 93.506 77 2 3 3699 3775 652291028 652290955 1.420000e-20 111.0
14 TraesCS7B01G356900 chr7A 89.041 73 7 1 4155 4226 648705361 648705289 6.660000e-14 89.8
15 TraesCS7B01G356900 chr2A 90.769 65 6 0 4151 4215 739629019 739628955 2.400000e-13 87.9
16 TraesCS7B01G356900 chr2A 81.818 88 6 8 4152 4231 182010826 182010911 1.120000e-06 65.8
17 TraesCS7B01G356900 chr5D 86.667 75 10 0 4049 4123 51893653 51893579 3.100000e-12 84.2
18 TraesCS7B01G356900 chr2B 97.368 38 1 0 4153 4190 269374176 269374213 1.120000e-06 65.8
19 TraesCS7B01G356900 chr1D 91.304 46 3 1 4180 4225 454494209 454494253 1.450000e-05 62.1
20 TraesCS7B01G356900 chr4B 79.221 77 15 1 4150 4226 434099202 434099277 9.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G356900 chr7B 617558932 617563763 4831 True 8924.00 8924 100.0000 1 4832 1 chr7B.!!$R1 4831
1 TraesCS7B01G356900 chr7D 566017315 566021851 4536 True 1194.75 3965 88.0575 511 4545 4 chr7D.!!$R2 4034
2 TraesCS7B01G356900 chr7A 652290036 652293918 3882 True 969.00 2739 88.1762 500 4616 5 chr7A.!!$R2 4116
3 TraesCS7B01G356900 chr7A 652298680 652299247 567 True 220.50 267 88.8625 1 441 2 chr7A.!!$R3 440

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
82 83 0.107165 GGCACGAATTTCTAGCCCCT 60.107 55.0 14.58 0.00 39.42 4.79 F
1231 1469 0.028902 ACGCGGCAGAAAGAAAACAC 59.971 50.0 12.47 0.00 0.00 3.32 F
1321 1559 0.037697 CCCGTGTCATGAACCTCGAA 60.038 55.0 0.00 0.00 0.00 3.71 F
1696 1939 0.169672 CACATGTTGCAGCTAGGCAC 59.830 55.0 0.00 0.00 44.86 5.01 F
3473 3779 0.034896 ATCATATGGTCGCCGGGAAC 59.965 55.0 2.18 1.68 0.00 3.62 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1322 1560 0.455005 CGACAGAGATCAGCTGCTCA 59.545 55.000 19.13 0.00 36.86 4.26 R
2591 2848 2.517959 CCCCTCTCAACAAGCAATCAA 58.482 47.619 0.00 0.00 0.00 2.57 R
2964 3223 2.755650 AGGCTAGTTGAACAACAGTCG 58.244 47.619 17.85 6.01 43.47 4.18 R
3524 3830 0.318529 CACGAGAGATCATCAGGCGG 60.319 60.000 0.00 0.00 0.00 6.13 R
4792 5657 0.038618 CGAGACGGTGTGGTGATCAA 60.039 55.000 0.00 0.00 0.00 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 46 1.073199 AGGTGGAAGAAACCTGGCG 59.927 57.895 0.00 0.00 46.51 5.69
52 53 1.202348 GAAGAAACCTGGCGAAATGGG 59.798 52.381 0.00 0.00 0.00 4.00
76 77 0.391927 CCCACGGGCACGAATTTCTA 60.392 55.000 19.19 0.00 44.60 2.10
81 82 2.405143 GGCACGAATTTCTAGCCCC 58.595 57.895 14.58 0.00 39.42 5.80
82 83 0.107165 GGCACGAATTTCTAGCCCCT 60.107 55.000 14.58 0.00 39.42 4.79
91 92 1.429930 TTCTAGCCCCTCACAACACA 58.570 50.000 0.00 0.00 0.00 3.72
105 107 3.511146 CACAACACATGGATAAAAGGCCT 59.489 43.478 0.00 0.00 0.00 5.19
114 116 2.093128 GGATAAAAGGCCTGGTCGAAGA 60.093 50.000 5.69 0.00 0.00 2.87
130 132 4.195334 GACCGGCCTGCCATGGAT 62.195 66.667 18.40 0.00 35.37 3.41
131 133 4.195334 ACCGGCCTGCCATGGATC 62.195 66.667 18.40 0.00 35.37 3.36
134 136 2.191513 CGGCCTGCCATGGATCAAG 61.192 63.158 18.40 6.56 35.37 3.02
135 137 1.831286 GGCCTGCCATGGATCAAGG 60.831 63.158 18.40 16.46 35.81 3.61
137 139 0.178970 GCCTGCCATGGATCAAGGAT 60.179 55.000 18.40 0.00 0.00 3.24
138 140 1.617322 CCTGCCATGGATCAAGGATG 58.383 55.000 18.40 0.00 0.00 3.51
139 141 1.144298 CCTGCCATGGATCAAGGATGA 59.856 52.381 18.40 0.00 40.57 2.92
154 156 7.966339 TCAAGGATGATCCATGAATTTCTTT 57.034 32.000 16.30 0.00 40.83 2.52
155 157 8.370266 TCAAGGATGATCCATGAATTTCTTTT 57.630 30.769 16.30 0.00 40.83 2.27
156 158 8.818860 TCAAGGATGATCCATGAATTTCTTTTT 58.181 29.630 16.30 0.00 40.83 1.94
157 159 9.095065 CAAGGATGATCCATGAATTTCTTTTTC 57.905 33.333 14.90 0.00 37.42 2.29
158 160 7.789026 AGGATGATCCATGAATTTCTTTTTCC 58.211 34.615 14.90 0.00 39.61 3.13
159 161 7.622479 AGGATGATCCATGAATTTCTTTTTCCT 59.378 33.333 14.90 0.00 39.61 3.36
160 162 8.262933 GGATGATCCATGAATTTCTTTTTCCTT 58.737 33.333 6.60 0.00 36.28 3.36
161 163 9.662947 GATGATCCATGAATTTCTTTTTCCTTT 57.337 29.630 0.00 0.00 0.00 3.11
163 165 9.275398 TGATCCATGAATTTCTTTTTCCTTTTG 57.725 29.630 0.00 0.00 0.00 2.44
164 166 9.276590 GATCCATGAATTTCTTTTTCCTTTTGT 57.723 29.630 0.00 0.00 0.00 2.83
217 375 5.523013 GCAAGTAGCTTTGTACTCTTCTG 57.477 43.478 0.00 0.00 41.15 3.02
218 376 4.991687 GCAAGTAGCTTTGTACTCTTCTGT 59.008 41.667 0.00 0.00 41.15 3.41
219 377 5.119434 GCAAGTAGCTTTGTACTCTTCTGTC 59.881 44.000 0.00 0.00 41.15 3.51
222 380 7.762588 AGTAGCTTTGTACTCTTCTGTCTTA 57.237 36.000 0.00 0.00 0.00 2.10
253 411 5.773176 GGTTCATCTTCAAGGGGAGTTTAAA 59.227 40.000 0.00 0.00 0.00 1.52
257 415 9.768215 TTCATCTTCAAGGGGAGTTTAAATAAT 57.232 29.630 0.00 0.00 0.00 1.28
258 416 9.768215 TCATCTTCAAGGGGAGTTTAAATAATT 57.232 29.630 0.00 0.00 0.00 1.40
422 580 8.166422 TCCTGAATTTTTGAAAGGTAGAAGAC 57.834 34.615 0.00 0.00 0.00 3.01
447 605 4.637771 GTCGAAATGGACCCCAGG 57.362 61.111 0.00 0.00 36.75 4.45
448 606 1.749258 GTCGAAATGGACCCCAGGC 60.749 63.158 0.00 0.00 36.75 4.85
449 607 2.440247 CGAAATGGACCCCAGGCC 60.440 66.667 0.00 0.00 36.75 5.19
450 608 2.440247 GAAATGGACCCCAGGCCG 60.440 66.667 0.00 0.00 36.75 6.13
451 609 3.264845 AAATGGACCCCAGGCCGT 61.265 61.111 0.00 0.00 36.75 5.68
452 610 2.781431 GAAATGGACCCCAGGCCGTT 62.781 60.000 0.00 0.00 36.75 4.44
453 611 2.380571 AAATGGACCCCAGGCCGTTT 62.381 55.000 0.00 0.00 36.75 3.60
454 612 2.380571 AATGGACCCCAGGCCGTTTT 62.381 55.000 0.00 0.00 36.75 2.43
455 613 2.203582 GGACCCCAGGCCGTTTTT 60.204 61.111 0.00 0.00 0.00 1.94
456 614 1.075305 GGACCCCAGGCCGTTTTTA 59.925 57.895 0.00 0.00 0.00 1.52
457 615 1.246056 GGACCCCAGGCCGTTTTTAC 61.246 60.000 0.00 0.00 0.00 2.01
458 616 1.228644 ACCCCAGGCCGTTTTTACC 60.229 57.895 0.00 0.00 0.00 2.85
459 617 1.228613 CCCCAGGCCGTTTTTACCA 60.229 57.895 0.00 0.00 0.00 3.25
460 618 0.613572 CCCCAGGCCGTTTTTACCAT 60.614 55.000 0.00 0.00 0.00 3.55
461 619 1.262417 CCCAGGCCGTTTTTACCATT 58.738 50.000 0.00 0.00 0.00 3.16
462 620 1.203758 CCCAGGCCGTTTTTACCATTC 59.796 52.381 0.00 0.00 0.00 2.67
463 621 1.135517 CCAGGCCGTTTTTACCATTCG 60.136 52.381 0.00 0.00 0.00 3.34
464 622 1.538075 CAGGCCGTTTTTACCATTCGT 59.462 47.619 0.00 0.00 0.00 3.85
465 623 2.030628 CAGGCCGTTTTTACCATTCGTT 60.031 45.455 0.00 0.00 0.00 3.85
466 624 2.030628 AGGCCGTTTTTACCATTCGTTG 60.031 45.455 0.00 0.00 0.00 4.10
467 625 2.030981 GGCCGTTTTTACCATTCGTTGA 60.031 45.455 0.00 0.00 0.00 3.18
468 626 3.550436 GGCCGTTTTTACCATTCGTTGAA 60.550 43.478 0.00 0.00 0.00 2.69
469 627 4.043073 GCCGTTTTTACCATTCGTTGAAA 58.957 39.130 0.00 0.00 0.00 2.69
470 628 4.085466 GCCGTTTTTACCATTCGTTGAAAC 60.085 41.667 0.00 0.00 0.00 2.78
471 629 4.441744 CCGTTTTTACCATTCGTTGAAACC 59.558 41.667 0.00 0.00 30.33 3.27
472 630 5.275494 CGTTTTTACCATTCGTTGAAACCT 58.725 37.500 0.00 0.00 30.33 3.50
473 631 6.428799 CGTTTTTACCATTCGTTGAAACCTA 58.571 36.000 0.00 0.00 30.33 3.08
474 632 7.079475 CGTTTTTACCATTCGTTGAAACCTAT 58.921 34.615 0.00 0.00 30.33 2.57
475 633 7.592164 CGTTTTTACCATTCGTTGAAACCTATT 59.408 33.333 0.00 0.00 30.33 1.73
476 634 8.696175 GTTTTTACCATTCGTTGAAACCTATTG 58.304 33.333 0.00 0.00 0.00 1.90
477 635 7.747155 TTTACCATTCGTTGAAACCTATTGA 57.253 32.000 0.00 0.00 0.00 2.57
478 636 5.622770 ACCATTCGTTGAAACCTATTGAC 57.377 39.130 0.00 0.00 0.00 3.18
479 637 5.067273 ACCATTCGTTGAAACCTATTGACA 58.933 37.500 0.00 0.00 0.00 3.58
480 638 5.710099 ACCATTCGTTGAAACCTATTGACAT 59.290 36.000 0.00 0.00 0.00 3.06
481 639 6.208599 ACCATTCGTTGAAACCTATTGACATT 59.791 34.615 0.00 0.00 0.00 2.71
482 640 7.090173 CCATTCGTTGAAACCTATTGACATTT 58.910 34.615 0.00 0.00 0.00 2.32
483 641 7.598493 CCATTCGTTGAAACCTATTGACATTTT 59.402 33.333 0.00 0.00 0.00 1.82
484 642 8.977505 CATTCGTTGAAACCTATTGACATTTTT 58.022 29.630 0.00 0.00 0.00 1.94
493 651 9.942850 AAACCTATTGACATTTTTATTTGAGGG 57.057 29.630 0.00 0.00 0.00 4.30
494 652 8.078060 ACCTATTGACATTTTTATTTGAGGGG 57.922 34.615 0.00 0.00 0.00 4.79
495 653 7.125659 ACCTATTGACATTTTTATTTGAGGGGG 59.874 37.037 0.00 0.00 0.00 5.40
496 654 7.344352 CCTATTGACATTTTTATTTGAGGGGGA 59.656 37.037 0.00 0.00 0.00 4.81
497 655 5.993748 TGACATTTTTATTTGAGGGGGAC 57.006 39.130 0.00 0.00 0.00 4.46
498 656 5.650283 TGACATTTTTATTTGAGGGGGACT 58.350 37.500 0.00 0.00 0.00 3.85
502 660 7.013834 ACATTTTTATTTGAGGGGGACTGTAA 58.986 34.615 0.00 0.00 0.00 2.41
543 701 3.978876 GGTCCAGCCCAACTACAAT 57.021 52.632 0.00 0.00 0.00 2.71
607 792 4.609018 AGGCGCTGCGAGTGTGTT 62.609 61.111 28.07 0.00 0.00 3.32
612 797 1.292223 GCTGCGAGTGTGTTCCCTA 59.708 57.895 0.00 0.00 0.00 3.53
688 879 2.445654 CTCCTCCTGCTCCCCTCC 60.446 72.222 0.00 0.00 0.00 4.30
773 964 2.846532 CCACTGCCTGTTCCCCTT 59.153 61.111 0.00 0.00 0.00 3.95
778 969 0.610232 CTGCCTGTTCCCCTTTCTGG 60.610 60.000 0.00 0.00 0.00 3.86
906 1117 0.858139 AAGGAGGAGGAGGAGGAGGT 60.858 60.000 0.00 0.00 0.00 3.85
918 1135 1.229336 AGGAGGTGTGGAGGACAGG 60.229 63.158 0.00 0.00 34.28 4.00
920 1137 1.536662 GAGGTGTGGAGGACAGGGT 60.537 63.158 0.00 0.00 34.28 4.34
945 1162 2.375766 GCAACTGCTCGTCCACTCG 61.376 63.158 0.00 0.00 38.21 4.18
947 1164 3.898627 AACTGCTCGTCCACTCGCG 62.899 63.158 0.00 0.00 0.00 5.87
960 1177 3.883744 CTCGCGCAGGGGAGTTGTT 62.884 63.158 8.75 0.00 45.43 2.83
966 1202 1.604593 CAGGGGAGTTGTTGGCCTG 60.605 63.158 3.32 0.00 0.00 4.85
996 1232 2.112072 TTGGACAGGGAGGGAGAGCT 62.112 60.000 0.00 0.00 0.00 4.09
1077 1313 3.795101 AGCCGAAATCGAACTGTAATACG 59.205 43.478 4.04 0.00 43.02 3.06
1093 1329 7.010183 ACTGTAATACGACTGTGTTTATGCATC 59.990 37.037 0.19 0.00 31.37 3.91
1223 1461 1.841663 GCTCAAAGACGCGGCAGAAA 61.842 55.000 17.71 0.00 0.00 2.52
1231 1469 0.028902 ACGCGGCAGAAAGAAAACAC 59.971 50.000 12.47 0.00 0.00 3.32
1239 1477 3.304057 GCAGAAAGAAAACACTTCCTCCG 60.304 47.826 0.00 0.00 0.00 4.63
1303 1541 1.478105 GTTCCCTGTCAATTGATGCCC 59.522 52.381 12.12 0.00 0.00 5.36
1318 1556 1.745489 GCCCCGTGTCATGAACCTC 60.745 63.158 0.00 0.00 0.00 3.85
1319 1557 1.447838 CCCCGTGTCATGAACCTCG 60.448 63.158 0.00 0.00 0.00 4.63
1320 1558 1.589630 CCCGTGTCATGAACCTCGA 59.410 57.895 0.00 0.00 0.00 4.04
1321 1559 0.037697 CCCGTGTCATGAACCTCGAA 60.038 55.000 0.00 0.00 0.00 3.71
1322 1560 1.405526 CCCGTGTCATGAACCTCGAAT 60.406 52.381 0.00 0.00 0.00 3.34
1323 1561 1.660607 CCGTGTCATGAACCTCGAATG 59.339 52.381 0.00 0.00 0.00 2.67
1324 1562 2.606108 CGTGTCATGAACCTCGAATGA 58.394 47.619 0.00 0.00 0.00 2.57
1325 1563 2.600420 CGTGTCATGAACCTCGAATGAG 59.400 50.000 0.00 0.00 42.18 2.90
1326 1564 2.349886 GTGTCATGAACCTCGAATGAGC 59.650 50.000 0.00 0.00 41.13 4.26
1327 1565 2.028203 TGTCATGAACCTCGAATGAGCA 60.028 45.455 0.00 0.00 41.13 4.26
1328 1566 2.606725 GTCATGAACCTCGAATGAGCAG 59.393 50.000 0.00 0.00 41.13 4.24
1329 1567 1.329906 CATGAACCTCGAATGAGCAGC 59.670 52.381 0.00 0.00 41.13 5.25
1330 1568 0.610174 TGAACCTCGAATGAGCAGCT 59.390 50.000 0.00 0.00 41.13 4.24
1377 1615 5.393678 CCATCATCATGCAGAAAATCACACA 60.394 40.000 0.00 0.00 0.00 3.72
1393 1631 4.871513 TCACACAGTCTTAGCAAGTAGTG 58.128 43.478 0.00 0.00 34.40 2.74
1508 1746 4.928661 CCAGTCATCTTCTGGTAAAACG 57.071 45.455 4.06 0.00 45.09 3.60
1516 1754 2.851263 TCTGGTAAAACGCAGGTGAT 57.149 45.000 0.00 0.00 0.00 3.06
1521 1759 4.328536 TGGTAAAACGCAGGTGATAACAT 58.671 39.130 0.00 0.00 0.00 2.71
1528 1766 3.873361 ACGCAGGTGATAACATGATTGAG 59.127 43.478 0.00 0.00 0.00 3.02
1568 1811 3.054434 TGGCTAATGTGCTTACCTGTGAT 60.054 43.478 0.00 0.00 0.00 3.06
1569 1812 3.947834 GGCTAATGTGCTTACCTGTGATT 59.052 43.478 0.00 0.00 0.00 2.57
1570 1813 4.201950 GGCTAATGTGCTTACCTGTGATTG 60.202 45.833 0.00 0.00 0.00 2.67
1571 1814 4.396166 GCTAATGTGCTTACCTGTGATTGT 59.604 41.667 0.00 0.00 0.00 2.71
1572 1815 4.771590 AATGTGCTTACCTGTGATTGTG 57.228 40.909 0.00 0.00 0.00 3.33
1573 1816 3.483808 TGTGCTTACCTGTGATTGTGA 57.516 42.857 0.00 0.00 0.00 3.58
1580 1823 5.278463 GCTTACCTGTGATTGTGAACATTGT 60.278 40.000 0.00 0.00 0.00 2.71
1584 1827 2.692041 TGTGATTGTGAACATTGTGCCA 59.308 40.909 0.00 0.00 0.00 4.92
1606 1849 5.049405 CCATCGAAAAACTGCAGAGTTACTT 60.049 40.000 23.35 6.16 41.87 2.24
1609 1852 7.347508 TCGAAAAACTGCAGAGTTACTTATC 57.652 36.000 23.35 6.70 41.87 1.75
1615 1858 5.678583 ACTGCAGAGTTACTTATCATGCAT 58.321 37.500 23.35 0.00 40.96 3.96
1632 1875 7.496529 TCATGCATAAGCTGTTATTTACTCC 57.503 36.000 0.00 0.00 42.74 3.85
1648 1891 9.674068 TTATTTACTCCATGTACTTATGCACAA 57.326 29.630 0.00 0.00 0.00 3.33
1696 1939 0.169672 CACATGTTGCAGCTAGGCAC 59.830 55.000 0.00 0.00 44.86 5.01
1743 1986 8.751242 GGATACTAGTAATTCATTCTCCCCTAC 58.249 40.741 6.70 0.00 0.00 3.18
1756 1999 0.474184 CCCCTACCCGAATTGCTCAT 59.526 55.000 0.00 0.00 0.00 2.90
1875 2118 9.838339 TCTTCAGGGAGTTATCATATCTTTTTC 57.162 33.333 0.00 0.00 0.00 2.29
1906 2158 6.477253 TGTGGTGTAAGTAGAATGGCATTTA 58.523 36.000 14.93 6.15 0.00 1.40
1930 2182 6.194235 ACTTTGGCAATCATTAGATTACCCA 58.806 36.000 0.00 5.67 44.05 4.51
1931 2183 6.322201 ACTTTGGCAATCATTAGATTACCCAG 59.678 38.462 0.00 4.46 44.05 4.45
2014 2266 2.356125 GGCTTAAGAGGGTCATGAGCAA 60.356 50.000 25.18 10.33 0.00 3.91
2293 2545 5.357742 TCTTGCATAGCCTTGTCTGATTA 57.642 39.130 0.00 0.00 0.00 1.75
2357 2613 8.954950 TTAGCTATACTAGAACTAACTCACGT 57.045 34.615 0.00 0.00 30.79 4.49
2514 2770 4.395959 AATTCACAAATATGCAGCCTGG 57.604 40.909 0.00 0.00 0.00 4.45
2591 2848 9.899226 GAGTTCTAAAAACATTATTTGCTGACT 57.101 29.630 0.00 0.00 0.00 3.41
2673 2930 5.841957 ATGCTGTTTCTTTTCTGTGAACT 57.158 34.783 0.00 0.00 0.00 3.01
2797 3054 6.341316 TGCTCTAACTTGATTGGTAGTCATC 58.659 40.000 0.00 0.00 0.00 2.92
2822 3079 6.037500 CCATTTCGATTTGAGCATAGTTCTGA 59.962 38.462 0.00 0.00 0.00 3.27
2917 3176 3.237268 TGTGAAAGCCACCCATACTTT 57.763 42.857 0.00 0.00 45.09 2.66
2964 3223 6.017400 TGGAGAAAATCAAGAAGCATGTTC 57.983 37.500 0.00 0.00 0.00 3.18
3079 3379 5.495926 ACAAGATGTGGAGAAGTCTCATT 57.504 39.130 10.39 0.00 44.60 2.57
3088 3388 5.936956 GTGGAGAAGTCTCATTTCATCTGTT 59.063 40.000 10.39 0.00 44.60 3.16
3133 3433 4.600111 TCAGAGGGTAGTTTGTGGGTAAAT 59.400 41.667 0.00 0.00 0.00 1.40
3145 3445 5.570205 TGTGGGTAAATTGTTGAGTAGGA 57.430 39.130 0.00 0.00 0.00 2.94
3253 3553 4.346418 AGAGCCATAATCGTTGGAGAGAAT 59.654 41.667 0.00 0.00 36.26 2.40
3257 3557 5.406780 GCCATAATCGTTGGAGAGAATAGTG 59.593 44.000 0.00 0.00 36.26 2.74
3265 3565 7.386851 TCGTTGGAGAGAATAGTGAAAAATCT 58.613 34.615 0.00 0.00 0.00 2.40
3305 3605 1.876156 AGAAGAAAGCCTTGCACTTCG 59.124 47.619 11.05 0.00 38.89 3.79
3323 3623 7.041440 TGCACTTCGAATTTTCTCAATTGACTA 60.041 33.333 3.38 0.00 0.00 2.59
3350 3650 4.275936 GCAAGCATTCACGGATTATTAGGT 59.724 41.667 0.00 0.00 0.00 3.08
3473 3779 0.034896 ATCATATGGTCGCCGGGAAC 59.965 55.000 2.18 1.68 0.00 3.62
3524 3830 3.065925 GCTGGAAAGCTGTTCCACATATC 59.934 47.826 19.97 8.57 43.17 1.63
3562 3868 3.057526 CGTGATCGTGGGAGCAATATCTA 60.058 47.826 0.00 0.00 40.82 1.98
3584 3890 2.863153 GCAACGACGCTGAAGCAT 59.137 55.556 1.68 0.00 42.21 3.79
3604 3910 8.438676 AAGCATACACTACTGGTATTTTGATC 57.561 34.615 0.00 0.00 29.24 2.92
3605 3911 7.564793 AGCATACACTACTGGTATTTTGATCA 58.435 34.615 0.00 0.00 29.24 2.92
3692 4003 9.809395 ATTTTATGGATGAGATGTCTTGATGAT 57.191 29.630 0.00 0.00 0.00 2.45
3693 4004 8.617290 TTTATGGATGAGATGTCTTGATGATG 57.383 34.615 0.00 0.00 0.00 3.07
3694 4005 4.386711 TGGATGAGATGTCTTGATGATGC 58.613 43.478 0.00 0.00 0.00 3.91
3695 4006 3.752222 GGATGAGATGTCTTGATGATGCC 59.248 47.826 0.00 0.00 0.00 4.40
3696 4007 4.505215 GGATGAGATGTCTTGATGATGCCT 60.505 45.833 0.00 0.00 0.00 4.75
3697 4008 4.498894 TGAGATGTCTTGATGATGCCTT 57.501 40.909 0.00 0.00 0.00 4.35
3729 4040 5.392380 GGTTGCTAATTGTTGTCATCTCCTG 60.392 44.000 0.00 0.00 0.00 3.86
3742 4053 2.425143 TCTCCTGTCCATTGCATTCC 57.575 50.000 0.00 0.00 0.00 3.01
3762 4088 1.826720 CATTGGATGGGTGGGAAACTG 59.173 52.381 0.00 0.00 0.00 3.16
3763 4089 0.541764 TTGGATGGGTGGGAAACTGC 60.542 55.000 0.00 0.00 0.00 4.40
3764 4090 1.384191 GGATGGGTGGGAAACTGCT 59.616 57.895 0.00 0.00 0.00 4.24
3766 4092 1.177401 GATGGGTGGGAAACTGCTTC 58.823 55.000 0.00 0.00 0.00 3.86
3767 4093 0.482446 ATGGGTGGGAAACTGCTTCA 59.518 50.000 0.00 0.00 35.55 3.02
3768 4094 0.260230 TGGGTGGGAAACTGCTTCAA 59.740 50.000 0.00 0.00 35.55 2.69
3798 4152 0.877213 CTTTGTTGCAGGCTTGTGGC 60.877 55.000 0.00 0.00 40.90 5.01
3869 4223 3.659786 TGGTGTTTGAGGAGAACATACG 58.340 45.455 0.00 0.00 39.03 3.06
3870 4224 3.070446 TGGTGTTTGAGGAGAACATACGT 59.930 43.478 0.00 0.00 39.03 3.57
3871 4225 4.281435 TGGTGTTTGAGGAGAACATACGTA 59.719 41.667 0.00 0.00 39.03 3.57
3872 4226 4.624452 GGTGTTTGAGGAGAACATACGTAC 59.376 45.833 0.00 0.00 39.03 3.67
3877 4231 3.022406 GAGGAGAACATACGTACCAGGT 58.978 50.000 0.00 0.00 0.00 4.00
3884 4238 6.359804 AGAACATACGTACCAGGTGTATCTA 58.640 40.000 0.76 0.00 0.00 1.98
3895 4249 5.053145 CCAGGTGTATCTAGAGAAATGTGC 58.947 45.833 0.00 0.00 0.00 4.57
3961 4315 1.734465 GGCGTCAAGATTCAGACTTGG 59.266 52.381 0.00 0.00 43.11 3.61
3962 4316 2.417719 GCGTCAAGATTCAGACTTGGT 58.582 47.619 0.00 0.00 43.11 3.67
3963 4317 2.413453 GCGTCAAGATTCAGACTTGGTC 59.587 50.000 0.00 0.00 43.11 4.02
3964 4318 2.663602 CGTCAAGATTCAGACTTGGTCG 59.336 50.000 0.00 0.00 43.11 4.79
3965 4319 2.413453 GTCAAGATTCAGACTTGGTCGC 59.587 50.000 0.00 0.00 43.11 5.19
3966 4320 2.300152 TCAAGATTCAGACTTGGTCGCT 59.700 45.455 0.00 0.00 43.11 4.93
3967 4321 2.663826 AGATTCAGACTTGGTCGCTC 57.336 50.000 0.00 0.00 37.67 5.03
3968 4322 1.205893 AGATTCAGACTTGGTCGCTCC 59.794 52.381 0.00 0.00 37.67 4.70
3969 4323 1.205893 GATTCAGACTTGGTCGCTCCT 59.794 52.381 0.00 0.00 37.67 3.69
3970 4324 1.048601 TTCAGACTTGGTCGCTCCTT 58.951 50.000 0.00 0.00 37.67 3.36
3971 4325 1.048601 TCAGACTTGGTCGCTCCTTT 58.951 50.000 0.00 0.00 37.67 3.11
3972 4326 1.151668 CAGACTTGGTCGCTCCTTTG 58.848 55.000 0.00 0.00 37.67 2.77
3973 4327 0.603975 AGACTTGGTCGCTCCTTTGC 60.604 55.000 0.00 0.00 37.67 3.68
3987 4341 5.928153 GCTCCTTTGCGTATAATAATGACC 58.072 41.667 0.00 0.00 0.00 4.02
3988 4342 5.389516 GCTCCTTTGCGTATAATAATGACCG 60.390 44.000 0.00 0.00 0.00 4.79
3989 4343 5.845103 TCCTTTGCGTATAATAATGACCGA 58.155 37.500 0.00 0.00 0.00 4.69
3990 4344 6.282167 TCCTTTGCGTATAATAATGACCGAA 58.718 36.000 0.00 0.00 0.00 4.30
3991 4345 6.201425 TCCTTTGCGTATAATAATGACCGAAC 59.799 38.462 0.00 0.00 0.00 3.95
3992 4346 5.564213 TTGCGTATAATAATGACCGAACG 57.436 39.130 0.00 0.00 0.00 3.95
3993 4347 4.609947 TGCGTATAATAATGACCGAACGT 58.390 39.130 0.00 0.00 0.00 3.99
3994 4348 5.042593 TGCGTATAATAATGACCGAACGTT 58.957 37.500 0.00 0.00 0.00 3.99
3995 4349 5.519566 TGCGTATAATAATGACCGAACGTTT 59.480 36.000 0.46 0.00 0.00 3.60
3996 4350 6.035866 TGCGTATAATAATGACCGAACGTTTT 59.964 34.615 0.46 0.00 0.00 2.43
3997 4351 6.567512 GCGTATAATAATGACCGAACGTTTTC 59.432 38.462 0.46 0.15 0.00 2.29
3998 4352 7.515684 GCGTATAATAATGACCGAACGTTTTCT 60.516 37.037 0.46 0.00 0.00 2.52
3999 4353 8.323140 CGTATAATAATGACCGAACGTTTTCTT 58.677 33.333 0.46 0.00 0.00 2.52
4000 4354 9.977762 GTATAATAATGACCGAACGTTTTCTTT 57.022 29.630 0.46 6.99 0.00 2.52
4002 4356 6.796705 ATAATGACCGAACGTTTTCTTTCT 57.203 33.333 0.46 0.00 0.00 2.52
4003 4357 5.494632 AATGACCGAACGTTTTCTTTCTT 57.505 34.783 0.46 0.00 0.00 2.52
4004 4358 4.950434 TGACCGAACGTTTTCTTTCTTT 57.050 36.364 0.46 0.00 0.00 2.52
4010 4364 4.603825 CGAACGTTTTCTTTCTTTGCATGC 60.604 41.667 11.82 11.82 0.00 4.06
4152 4542 7.875971 ACATCCGATTTAAATTAGAATGCCTC 58.124 34.615 1.43 0.00 0.00 4.70
4153 4543 6.877611 TCCGATTTAAATTAGAATGCCTCC 57.122 37.500 1.43 0.00 0.00 4.30
4154 4544 5.468746 TCCGATTTAAATTAGAATGCCTCCG 59.531 40.000 1.43 0.00 0.00 4.63
4160 4560 1.507140 TTAGAATGCCTCCGTCCCAT 58.493 50.000 0.00 0.00 0.00 4.00
4226 4666 9.309224 TGATCTTATATTATGAGACGAAGGGAA 57.691 33.333 0.62 0.00 0.00 3.97
4261 4707 5.411669 GGGAGTATTATTAAGGACGGCAATG 59.588 44.000 0.00 0.00 0.00 2.82
4327 4786 8.760735 TGGCACAAGGTACTAGTATAACATAAA 58.239 33.333 5.75 0.00 38.49 1.40
4328 4787 9.603921 GGCACAAGGTACTAGTATAACATAAAA 57.396 33.333 5.75 0.00 38.49 1.52
4409 5255 4.697352 ACAAACTGATCATGGTTAGACTGC 59.303 41.667 4.50 0.00 0.00 4.40
4489 5340 8.827177 ATAAAGAAAATCAAGTGTACGAGACA 57.173 30.769 0.00 0.00 34.94 3.41
4494 5345 8.470805 AGAAAATCAAGTGTACGAGACATATCT 58.529 33.333 0.00 0.00 41.14 1.98
4497 5348 6.753107 TCAAGTGTACGAGACATATCTTCA 57.247 37.500 0.00 0.00 41.14 3.02
4505 5356 6.252967 ACGAGACATATCTTCAGCTATCAG 57.747 41.667 0.00 0.00 34.34 2.90
4529 5380 1.875420 TTATGGCACGGACGTTCGGA 61.875 55.000 22.31 1.28 0.00 4.55
4562 5419 6.206634 GTGATTGAGGGTGAGTTTCAACATAA 59.793 38.462 0.00 0.00 35.30 1.90
4564 5421 6.385649 TTGAGGGTGAGTTTCAACATAAAC 57.614 37.500 0.00 0.00 35.30 2.01
4565 5422 4.825085 TGAGGGTGAGTTTCAACATAAACC 59.175 41.667 0.00 0.00 39.66 3.27
4570 5427 5.440685 GTGAGTTTCAACATAAACCTGTCG 58.559 41.667 0.00 0.00 39.66 4.35
4577 5434 7.447374 TTCAACATAAACCTGTCGATCAAAT 57.553 32.000 0.00 0.00 0.00 2.32
4582 5439 8.370493 ACATAAACCTGTCGATCAAATAGATG 57.630 34.615 0.00 0.00 37.00 2.90
4583 5440 7.987458 ACATAAACCTGTCGATCAAATAGATGT 59.013 33.333 0.00 0.00 37.00 3.06
4584 5441 9.476202 CATAAACCTGTCGATCAAATAGATGTA 57.524 33.333 0.00 0.00 37.00 2.29
4616 5481 3.463944 AGCGACTATTATTTTGGGACGG 58.536 45.455 0.00 0.00 0.00 4.79
4617 5482 3.133362 AGCGACTATTATTTTGGGACGGA 59.867 43.478 0.00 0.00 0.00 4.69
4618 5483 3.493503 GCGACTATTATTTTGGGACGGAG 59.506 47.826 0.00 0.00 0.00 4.63
4619 5484 4.056050 CGACTATTATTTTGGGACGGAGG 58.944 47.826 0.00 0.00 0.00 4.30
4620 5485 4.202182 CGACTATTATTTTGGGACGGAGGA 60.202 45.833 0.00 0.00 0.00 3.71
4621 5486 5.677567 GACTATTATTTTGGGACGGAGGAA 58.322 41.667 0.00 0.00 0.00 3.36
4622 5487 5.681639 ACTATTATTTTGGGACGGAGGAAG 58.318 41.667 0.00 0.00 0.00 3.46
4623 5488 3.359695 TTATTTTGGGACGGAGGAAGG 57.640 47.619 0.00 0.00 0.00 3.46
4624 5489 0.331616 ATTTTGGGACGGAGGAAGGG 59.668 55.000 0.00 0.00 0.00 3.95
4625 5490 0.768997 TTTTGGGACGGAGGAAGGGA 60.769 55.000 0.00 0.00 0.00 4.20
4626 5491 1.198759 TTTGGGACGGAGGAAGGGAG 61.199 60.000 0.00 0.00 0.00 4.30
4627 5492 2.039137 GGGACGGAGGAAGGGAGT 59.961 66.667 0.00 0.00 0.00 3.85
4628 5493 2.359967 GGGACGGAGGAAGGGAGTG 61.360 68.421 0.00 0.00 0.00 3.51
4629 5494 2.359967 GGACGGAGGAAGGGAGTGG 61.360 68.421 0.00 0.00 0.00 4.00
4630 5495 1.609794 GACGGAGGAAGGGAGTGGT 60.610 63.158 0.00 0.00 0.00 4.16
4631 5496 0.324091 GACGGAGGAAGGGAGTGGTA 60.324 60.000 0.00 0.00 0.00 3.25
4632 5497 0.338814 ACGGAGGAAGGGAGTGGTAT 59.661 55.000 0.00 0.00 0.00 2.73
4633 5498 1.273666 ACGGAGGAAGGGAGTGGTATT 60.274 52.381 0.00 0.00 0.00 1.89
4634 5499 1.838077 CGGAGGAAGGGAGTGGTATTT 59.162 52.381 0.00 0.00 0.00 1.40
4635 5500 2.238898 CGGAGGAAGGGAGTGGTATTTT 59.761 50.000 0.00 0.00 0.00 1.82
4636 5501 3.453353 CGGAGGAAGGGAGTGGTATTTTA 59.547 47.826 0.00 0.00 0.00 1.52
4637 5502 4.080751 CGGAGGAAGGGAGTGGTATTTTAA 60.081 45.833 0.00 0.00 0.00 1.52
4638 5503 5.191426 GGAGGAAGGGAGTGGTATTTTAAC 58.809 45.833 0.00 0.00 0.00 2.01
4639 5504 5.045066 GGAGGAAGGGAGTGGTATTTTAACT 60.045 44.000 0.00 0.00 0.00 2.24
4640 5505 6.464530 AGGAAGGGAGTGGTATTTTAACTT 57.535 37.500 0.00 0.00 0.00 2.66
4641 5506 6.860034 AGGAAGGGAGTGGTATTTTAACTTT 58.140 36.000 0.00 0.00 0.00 2.66
4642 5507 7.992295 AGGAAGGGAGTGGTATTTTAACTTTA 58.008 34.615 0.00 0.00 0.00 1.85
4643 5508 8.450434 AGGAAGGGAGTGGTATTTTAACTTTAA 58.550 33.333 0.00 0.00 0.00 1.52
4644 5509 9.081204 GGAAGGGAGTGGTATTTTAACTTTAAA 57.919 33.333 0.00 0.00 0.00 1.52
4647 5512 9.816787 AGGGAGTGGTATTTTAACTTTAAATCA 57.183 29.630 0.00 0.00 33.12 2.57
4651 5516 9.869757 AGTGGTATTTTAACTTTAAATCATGCC 57.130 29.630 6.42 6.42 33.12 4.40
4652 5517 9.646427 GTGGTATTTTAACTTTAAATCATGCCA 57.354 29.630 9.90 9.90 35.33 4.92
4653 5518 9.646427 TGGTATTTTAACTTTAAATCATGCCAC 57.354 29.630 9.90 0.00 34.06 5.01
4654 5519 9.093970 GGTATTTTAACTTTAAATCATGCCACC 57.906 33.333 7.73 0.00 31.51 4.61
4655 5520 9.093970 GTATTTTAACTTTAAATCATGCCACCC 57.906 33.333 0.00 0.00 33.12 4.61
4656 5521 3.866883 AACTTTAAATCATGCCACCCG 57.133 42.857 0.00 0.00 0.00 5.28
4657 5522 1.476488 ACTTTAAATCATGCCACCCGC 59.524 47.619 0.00 0.00 38.31 6.13
4658 5523 9.564474 TTTTAACTTTAAATCATGCCACCCGCA 62.564 37.037 0.00 0.00 40.97 5.69
4667 5532 3.371087 GCCACCCGCAAAAGAAAAA 57.629 47.368 0.00 0.00 37.47 1.94
4682 5547 2.184066 AAAAATCATGCCGGCCGC 59.816 55.556 26.77 16.45 38.31 6.53
4683 5548 3.698309 AAAAATCATGCCGGCCGCG 62.698 57.895 26.77 14.87 42.08 6.46
4700 5565 3.071495 CGTGTCGCAAATGTTCACC 57.929 52.632 0.00 0.00 0.00 4.02
4701 5566 0.721155 CGTGTCGCAAATGTTCACCG 60.721 55.000 0.00 0.00 0.00 4.94
4702 5567 0.306533 GTGTCGCAAATGTTCACCGT 59.693 50.000 0.00 0.00 0.00 4.83
4703 5568 1.018148 TGTCGCAAATGTTCACCGTT 58.982 45.000 0.00 0.00 0.00 4.44
4704 5569 2.032722 GTGTCGCAAATGTTCACCGTTA 60.033 45.455 0.00 0.00 0.00 3.18
4705 5570 2.809119 TGTCGCAAATGTTCACCGTTAT 59.191 40.909 0.00 0.00 0.00 1.89
4706 5571 3.251245 TGTCGCAAATGTTCACCGTTATT 59.749 39.130 0.00 0.00 0.00 1.40
4707 5572 4.451435 TGTCGCAAATGTTCACCGTTATTA 59.549 37.500 0.00 0.00 0.00 0.98
4708 5573 5.019498 GTCGCAAATGTTCACCGTTATTAG 58.981 41.667 0.00 0.00 0.00 1.73
4709 5574 4.691685 TCGCAAATGTTCACCGTTATTAGT 59.308 37.500 0.00 0.00 0.00 2.24
4710 5575 5.179742 TCGCAAATGTTCACCGTTATTAGTT 59.820 36.000 0.00 0.00 0.00 2.24
4711 5576 5.854338 CGCAAATGTTCACCGTTATTAGTTT 59.146 36.000 0.00 0.00 0.00 2.66
4712 5577 7.016466 CGCAAATGTTCACCGTTATTAGTTTA 58.984 34.615 0.00 0.00 0.00 2.01
4713 5578 7.534578 CGCAAATGTTCACCGTTATTAGTTTAA 59.465 33.333 0.00 0.00 0.00 1.52
4714 5579 9.349145 GCAAATGTTCACCGTTATTAGTTTAAT 57.651 29.630 0.00 0.00 0.00 1.40
4718 5583 7.731720 TGTTCACCGTTATTAGTTTAATCACG 58.268 34.615 8.00 8.00 42.35 4.35
4719 5584 7.384660 TGTTCACCGTTATTAGTTTAATCACGT 59.615 33.333 12.01 0.00 41.60 4.49
4720 5585 7.510428 TCACCGTTATTAGTTTAATCACGTC 57.490 36.000 12.01 0.00 41.60 4.34
4721 5586 7.089538 TCACCGTTATTAGTTTAATCACGTCA 58.910 34.615 12.01 0.00 41.60 4.35
4722 5587 7.274033 TCACCGTTATTAGTTTAATCACGTCAG 59.726 37.037 12.01 3.43 41.60 3.51
4723 5588 6.532657 ACCGTTATTAGTTTAATCACGTCAGG 59.467 38.462 12.01 3.18 41.60 3.86
4724 5589 6.753279 CCGTTATTAGTTTAATCACGTCAGGA 59.247 38.462 12.01 0.00 41.60 3.86
4725 5590 7.043590 CCGTTATTAGTTTAATCACGTCAGGAG 60.044 40.741 12.01 0.00 41.60 3.69
4726 5591 7.699391 CGTTATTAGTTTAATCACGTCAGGAGA 59.301 37.037 7.15 0.00 39.57 3.71
4727 5592 9.362539 GTTATTAGTTTAATCACGTCAGGAGAA 57.637 33.333 0.00 0.00 0.00 2.87
4728 5593 9.582431 TTATTAGTTTAATCACGTCAGGAGAAG 57.418 33.333 0.00 0.00 0.00 2.85
4729 5594 5.470047 AGTTTAATCACGTCAGGAGAAGT 57.530 39.130 0.00 0.00 36.91 3.01
4730 5595 5.855045 AGTTTAATCACGTCAGGAGAAGTT 58.145 37.500 0.00 0.00 34.12 2.66
4731 5596 6.989659 AGTTTAATCACGTCAGGAGAAGTTA 58.010 36.000 0.00 0.00 34.12 2.24
4732 5597 7.612677 AGTTTAATCACGTCAGGAGAAGTTAT 58.387 34.615 0.00 0.00 34.12 1.89
4733 5598 7.545965 AGTTTAATCACGTCAGGAGAAGTTATG 59.454 37.037 0.00 0.00 34.12 1.90
4734 5599 3.232213 TCACGTCAGGAGAAGTTATGC 57.768 47.619 0.00 0.00 34.12 3.14
4735 5600 2.094182 TCACGTCAGGAGAAGTTATGCC 60.094 50.000 0.00 0.00 34.12 4.40
4736 5601 1.207329 ACGTCAGGAGAAGTTATGCCC 59.793 52.381 0.00 0.00 32.34 5.36
4737 5602 1.802880 CGTCAGGAGAAGTTATGCCCG 60.803 57.143 0.00 0.00 0.00 6.13
4738 5603 1.207329 GTCAGGAGAAGTTATGCCCGT 59.793 52.381 0.00 0.00 0.00 5.28
4739 5604 2.429610 GTCAGGAGAAGTTATGCCCGTA 59.570 50.000 0.00 0.00 0.00 4.02
4740 5605 3.069729 GTCAGGAGAAGTTATGCCCGTAT 59.930 47.826 0.00 0.00 0.00 3.06
4741 5606 3.321111 TCAGGAGAAGTTATGCCCGTATC 59.679 47.826 0.00 0.00 0.00 2.24
4742 5607 2.633481 AGGAGAAGTTATGCCCGTATCC 59.367 50.000 0.00 0.00 0.00 2.59
4743 5608 2.367567 GGAGAAGTTATGCCCGTATCCA 59.632 50.000 0.00 0.00 0.00 3.41
4744 5609 3.181458 GGAGAAGTTATGCCCGTATCCAA 60.181 47.826 0.00 0.00 0.00 3.53
4745 5610 4.448210 GAGAAGTTATGCCCGTATCCAAA 58.552 43.478 0.00 0.00 0.00 3.28
4746 5611 5.048846 AGAAGTTATGCCCGTATCCAAAT 57.951 39.130 0.00 0.00 0.00 2.32
4747 5612 4.821805 AGAAGTTATGCCCGTATCCAAATG 59.178 41.667 0.00 0.00 0.00 2.32
4748 5613 4.431416 AGTTATGCCCGTATCCAAATGA 57.569 40.909 0.00 0.00 0.00 2.57
4749 5614 4.389374 AGTTATGCCCGTATCCAAATGAG 58.611 43.478 0.00 0.00 0.00 2.90
4750 5615 4.134563 GTTATGCCCGTATCCAAATGAGT 58.865 43.478 0.00 0.00 0.00 3.41
4751 5616 5.071250 AGTTATGCCCGTATCCAAATGAGTA 59.929 40.000 0.00 0.00 0.00 2.59
4752 5617 3.916359 TGCCCGTATCCAAATGAGTAA 57.084 42.857 0.00 0.00 0.00 2.24
4753 5618 4.223556 TGCCCGTATCCAAATGAGTAAA 57.776 40.909 0.00 0.00 0.00 2.01
4754 5619 3.942748 TGCCCGTATCCAAATGAGTAAAC 59.057 43.478 0.00 0.00 0.00 2.01
4755 5620 3.001939 GCCCGTATCCAAATGAGTAAACG 59.998 47.826 0.00 0.00 0.00 3.60
4756 5621 4.186159 CCCGTATCCAAATGAGTAAACGT 58.814 43.478 0.00 0.00 0.00 3.99
4757 5622 4.632688 CCCGTATCCAAATGAGTAAACGTT 59.367 41.667 0.00 0.00 0.00 3.99
4758 5623 5.446741 CCCGTATCCAAATGAGTAAACGTTG 60.447 44.000 0.00 0.00 0.00 4.10
4759 5624 5.019498 CGTATCCAAATGAGTAAACGTTGC 58.981 41.667 0.00 0.00 0.00 4.17
4760 5625 3.907894 TCCAAATGAGTAAACGTTGCC 57.092 42.857 0.00 0.00 0.00 4.52
4761 5626 3.215151 TCCAAATGAGTAAACGTTGCCA 58.785 40.909 0.00 0.00 0.00 4.92
4762 5627 3.252215 TCCAAATGAGTAAACGTTGCCAG 59.748 43.478 0.00 0.00 0.00 4.85
4763 5628 3.004315 CCAAATGAGTAAACGTTGCCAGT 59.996 43.478 0.00 0.00 0.00 4.00
4764 5629 3.896648 AATGAGTAAACGTTGCCAGTG 57.103 42.857 0.00 0.00 0.00 3.66
4765 5630 2.319136 TGAGTAAACGTTGCCAGTGT 57.681 45.000 0.00 0.00 0.00 3.55
4766 5631 2.634600 TGAGTAAACGTTGCCAGTGTT 58.365 42.857 0.00 0.00 0.00 3.32
4767 5632 3.011119 TGAGTAAACGTTGCCAGTGTTT 58.989 40.909 0.00 2.61 39.08 2.83
4768 5633 3.181505 TGAGTAAACGTTGCCAGTGTTTG 60.182 43.478 0.00 0.00 36.56 2.93
4769 5634 3.011119 AGTAAACGTTGCCAGTGTTTGA 58.989 40.909 0.00 0.00 36.56 2.69
4770 5635 2.271821 AAACGTTGCCAGTGTTTGAC 57.728 45.000 0.00 0.00 34.73 3.18
4771 5636 1.169577 AACGTTGCCAGTGTTTGACA 58.830 45.000 0.00 0.00 0.00 3.58
4772 5637 1.388547 ACGTTGCCAGTGTTTGACAT 58.611 45.000 0.00 0.00 0.00 3.06
4773 5638 1.065401 ACGTTGCCAGTGTTTGACATG 59.935 47.619 0.00 0.00 0.00 3.21
4774 5639 1.600164 CGTTGCCAGTGTTTGACATGG 60.600 52.381 0.00 0.00 33.12 3.66
4775 5640 1.680735 GTTGCCAGTGTTTGACATGGA 59.319 47.619 0.00 0.00 32.28 3.41
4776 5641 1.317613 TGCCAGTGTTTGACATGGAC 58.682 50.000 0.00 0.00 32.28 4.02
4777 5642 0.598065 GCCAGTGTTTGACATGGACC 59.402 55.000 0.00 0.00 32.28 4.46
4778 5643 0.874390 CCAGTGTTTGACATGGACCG 59.126 55.000 0.00 0.00 32.28 4.79
4779 5644 0.874390 CAGTGTTTGACATGGACCGG 59.126 55.000 0.00 0.00 0.00 5.28
4780 5645 0.472471 AGTGTTTGACATGGACCGGT 59.528 50.000 6.92 6.92 0.00 5.28
4781 5646 0.872388 GTGTTTGACATGGACCGGTC 59.128 55.000 27.04 27.04 34.63 4.79
4782 5647 0.470341 TGTTTGACATGGACCGGTCA 59.530 50.000 34.40 21.15 41.93 4.02
4783 5648 1.073125 TGTTTGACATGGACCGGTCAT 59.927 47.619 34.40 22.35 43.01 3.06
4784 5649 1.737793 GTTTGACATGGACCGGTCATC 59.262 52.381 34.40 24.18 43.01 2.92
4785 5650 0.108377 TTGACATGGACCGGTCATCG 60.108 55.000 34.40 22.99 43.01 3.84
4786 5651 1.883084 GACATGGACCGGTCATCGC 60.883 63.158 34.40 18.34 37.59 4.58
4787 5652 2.298158 GACATGGACCGGTCATCGCT 62.298 60.000 34.40 13.36 37.59 4.93
4788 5653 1.153369 CATGGACCGGTCATCGCTT 60.153 57.895 34.40 13.31 37.59 4.68
4789 5654 0.744414 CATGGACCGGTCATCGCTTT 60.744 55.000 34.40 8.88 37.59 3.51
4790 5655 0.035439 ATGGACCGGTCATCGCTTTT 60.035 50.000 34.40 7.83 37.59 2.27
4791 5656 0.672401 TGGACCGGTCATCGCTTTTC 60.672 55.000 34.40 15.06 37.59 2.29
4792 5657 0.391263 GGACCGGTCATCGCTTTTCT 60.391 55.000 34.40 0.00 37.59 2.52
4793 5658 1.439679 GACCGGTCATCGCTTTTCTT 58.560 50.000 29.75 0.00 37.59 2.52
4794 5659 1.128692 GACCGGTCATCGCTTTTCTTG 59.871 52.381 29.75 0.00 37.59 3.02
4795 5660 1.270625 ACCGGTCATCGCTTTTCTTGA 60.271 47.619 0.00 0.00 37.59 3.02
4796 5661 2.009774 CCGGTCATCGCTTTTCTTGAT 58.990 47.619 0.00 0.00 37.59 2.57
4797 5662 2.030946 CCGGTCATCGCTTTTCTTGATC 59.969 50.000 0.00 0.00 37.59 2.92
4798 5663 2.672874 CGGTCATCGCTTTTCTTGATCA 59.327 45.455 0.00 0.00 0.00 2.92
4799 5664 3.484229 CGGTCATCGCTTTTCTTGATCAC 60.484 47.826 0.00 0.00 0.00 3.06
4800 5665 3.181506 GGTCATCGCTTTTCTTGATCACC 60.182 47.826 0.00 0.00 0.00 4.02
4801 5666 3.436704 GTCATCGCTTTTCTTGATCACCA 59.563 43.478 0.00 0.00 0.00 4.17
4802 5667 3.436704 TCATCGCTTTTCTTGATCACCAC 59.563 43.478 0.00 0.00 0.00 4.16
4803 5668 2.844946 TCGCTTTTCTTGATCACCACA 58.155 42.857 0.00 0.00 0.00 4.17
4804 5669 2.548057 TCGCTTTTCTTGATCACCACAC 59.452 45.455 0.00 0.00 0.00 3.82
4805 5670 2.350772 CGCTTTTCTTGATCACCACACC 60.351 50.000 0.00 0.00 0.00 4.16
4806 5671 2.350772 GCTTTTCTTGATCACCACACCG 60.351 50.000 0.00 0.00 0.00 4.94
4807 5672 2.631160 TTTCTTGATCACCACACCGT 57.369 45.000 0.00 0.00 0.00 4.83
4808 5673 2.163818 TTCTTGATCACCACACCGTC 57.836 50.000 0.00 0.00 0.00 4.79
4809 5674 1.338107 TCTTGATCACCACACCGTCT 58.662 50.000 0.00 0.00 0.00 4.18
4810 5675 1.272490 TCTTGATCACCACACCGTCTC 59.728 52.381 0.00 0.00 0.00 3.36
4811 5676 0.038618 TTGATCACCACACCGTCTCG 60.039 55.000 0.00 0.00 0.00 4.04
4812 5677 0.891904 TGATCACCACACCGTCTCGA 60.892 55.000 0.00 0.00 0.00 4.04
4813 5678 0.242825 GATCACCACACCGTCTCGAA 59.757 55.000 0.00 0.00 0.00 3.71
4814 5679 0.677288 ATCACCACACCGTCTCGAAA 59.323 50.000 0.00 0.00 0.00 3.46
4815 5680 0.460722 TCACCACACCGTCTCGAAAA 59.539 50.000 0.00 0.00 0.00 2.29
4816 5681 0.859232 CACCACACCGTCTCGAAAAG 59.141 55.000 0.00 0.00 0.00 2.27
4817 5682 0.462789 ACCACACCGTCTCGAAAAGT 59.537 50.000 0.00 0.00 0.00 2.66
4818 5683 1.137513 CCACACCGTCTCGAAAAGTC 58.862 55.000 0.00 0.00 0.00 3.01
4819 5684 1.269621 CCACACCGTCTCGAAAAGTCT 60.270 52.381 0.00 0.00 0.00 3.24
4820 5685 2.470821 CACACCGTCTCGAAAAGTCTT 58.529 47.619 0.00 0.00 0.00 3.01
4821 5686 2.218759 CACACCGTCTCGAAAAGTCTTG 59.781 50.000 0.00 0.00 0.00 3.02
4822 5687 1.192534 CACCGTCTCGAAAAGTCTTGC 59.807 52.381 0.00 0.00 0.00 4.01
4823 5688 1.068741 ACCGTCTCGAAAAGTCTTGCT 59.931 47.619 0.00 0.00 0.00 3.91
4824 5689 2.295349 ACCGTCTCGAAAAGTCTTGCTA 59.705 45.455 0.00 0.00 0.00 3.49
4825 5690 3.056749 ACCGTCTCGAAAAGTCTTGCTAT 60.057 43.478 0.00 0.00 0.00 2.97
4826 5691 3.548268 CCGTCTCGAAAAGTCTTGCTATC 59.452 47.826 0.00 0.00 0.00 2.08
4827 5692 3.238570 CGTCTCGAAAAGTCTTGCTATCG 59.761 47.826 0.00 0.00 37.75 2.92
4828 5693 4.167268 GTCTCGAAAAGTCTTGCTATCGT 58.833 43.478 9.00 0.00 37.69 3.73
4829 5694 4.030753 GTCTCGAAAAGTCTTGCTATCGTG 59.969 45.833 9.00 7.59 37.69 4.35
4830 5695 3.909430 TCGAAAAGTCTTGCTATCGTGT 58.091 40.909 9.00 0.00 37.69 4.49
4831 5696 3.673338 TCGAAAAGTCTTGCTATCGTGTG 59.327 43.478 9.00 0.00 37.69 3.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 0.107654 CACCTCGTGGATTCTTCCCC 60.108 60.000 11.17 0.00 41.83 4.81
62 63 2.405143 GGGCTAGAAATTCGTGCCC 58.595 57.895 26.01 26.01 46.26 5.36
76 77 1.075482 CCATGTGTTGTGAGGGGCT 59.925 57.895 0.00 0.00 0.00 5.19
81 82 4.380867 GGCCTTTTATCCATGTGTTGTGAG 60.381 45.833 0.00 0.00 0.00 3.51
82 83 3.509575 GGCCTTTTATCCATGTGTTGTGA 59.490 43.478 0.00 0.00 0.00 3.58
91 92 1.843851 TCGACCAGGCCTTTTATCCAT 59.156 47.619 0.00 0.00 0.00 3.41
114 116 4.195334 GATCCATGGCAGGCCGGT 62.195 66.667 6.96 0.00 39.42 5.28
130 132 7.966339 AAAGAAATTCATGGATCATCCTTGA 57.034 32.000 16.65 16.65 45.47 3.02
131 133 9.095065 GAAAAAGAAATTCATGGATCATCCTTG 57.905 33.333 12.58 12.58 41.54 3.61
134 136 7.789026 AGGAAAAAGAAATTCATGGATCATCC 58.211 34.615 0.00 0.00 36.96 3.51
135 137 9.662947 AAAGGAAAAAGAAATTCATGGATCATC 57.337 29.630 0.00 0.00 0.00 2.92
137 139 9.275398 CAAAAGGAAAAAGAAATTCATGGATCA 57.725 29.630 0.00 0.00 0.00 2.92
138 140 9.276590 ACAAAAGGAAAAAGAAATTCATGGATC 57.723 29.630 0.00 0.00 0.00 3.36
195 197 4.991687 ACAGAAGAGTACAAAGCTACTTGC 59.008 41.667 0.00 0.00 43.29 4.01
196 198 6.451393 AGACAGAAGAGTACAAAGCTACTTG 58.549 40.000 0.00 0.00 0.00 3.16
215 373 7.210174 TGAAGATGAACCCGATAATAAGACAG 58.790 38.462 0.00 0.00 0.00 3.51
217 375 7.171678 CCTTGAAGATGAACCCGATAATAAGAC 59.828 40.741 0.00 0.00 0.00 3.01
218 376 7.217200 CCTTGAAGATGAACCCGATAATAAGA 58.783 38.462 0.00 0.00 0.00 2.10
219 377 6.428159 CCCTTGAAGATGAACCCGATAATAAG 59.572 42.308 0.00 0.00 0.00 1.73
222 380 4.446311 CCCCTTGAAGATGAACCCGATAAT 60.446 45.833 0.00 0.00 0.00 1.28
392 550 9.367160 TCTACCTTTCAAAAATTCAGGAAATCT 57.633 29.630 0.00 0.00 0.00 2.40
422 580 0.743345 GTCCATTTCGACCTTCCGGG 60.743 60.000 0.00 0.00 41.89 5.73
423 581 2.763651 GTCCATTTCGACCTTCCGG 58.236 57.895 0.00 0.00 0.00 5.14
433 591 2.440247 CGGCCTGGGGTCCATTTC 60.440 66.667 0.00 0.00 30.82 2.17
441 599 0.613572 ATGGTAAAAACGGCCTGGGG 60.614 55.000 0.00 0.00 0.00 4.96
442 600 1.203758 GAATGGTAAAAACGGCCTGGG 59.796 52.381 0.00 0.00 0.00 4.45
443 601 1.135517 CGAATGGTAAAAACGGCCTGG 60.136 52.381 0.00 0.00 0.00 4.45
444 602 1.538075 ACGAATGGTAAAAACGGCCTG 59.462 47.619 0.00 0.00 0.00 4.85
445 603 1.900245 ACGAATGGTAAAAACGGCCT 58.100 45.000 0.00 0.00 0.00 5.19
446 604 2.030981 TCAACGAATGGTAAAAACGGCC 60.031 45.455 0.00 0.00 0.00 6.13
447 605 3.270962 TCAACGAATGGTAAAAACGGC 57.729 42.857 0.00 0.00 0.00 5.68
448 606 4.441744 GGTTTCAACGAATGGTAAAAACGG 59.558 41.667 0.00 0.00 35.55 4.44
449 607 5.275494 AGGTTTCAACGAATGGTAAAAACG 58.725 37.500 0.00 0.00 35.55 3.60
450 608 8.696175 CAATAGGTTTCAACGAATGGTAAAAAC 58.304 33.333 0.00 0.00 34.69 2.43
451 609 8.630917 TCAATAGGTTTCAACGAATGGTAAAAA 58.369 29.630 0.00 0.00 0.00 1.94
452 610 8.077386 GTCAATAGGTTTCAACGAATGGTAAAA 58.923 33.333 0.00 0.00 0.00 1.52
453 611 7.228906 TGTCAATAGGTTTCAACGAATGGTAAA 59.771 33.333 0.00 0.00 0.00 2.01
454 612 6.711194 TGTCAATAGGTTTCAACGAATGGTAA 59.289 34.615 0.00 0.00 0.00 2.85
455 613 6.231951 TGTCAATAGGTTTCAACGAATGGTA 58.768 36.000 0.00 0.00 0.00 3.25
456 614 5.067273 TGTCAATAGGTTTCAACGAATGGT 58.933 37.500 0.00 0.00 0.00 3.55
457 615 5.621197 TGTCAATAGGTTTCAACGAATGG 57.379 39.130 0.00 0.00 0.00 3.16
458 616 8.519492 AAAATGTCAATAGGTTTCAACGAATG 57.481 30.769 0.00 0.00 0.00 2.67
467 625 9.942850 CCCTCAAATAAAAATGTCAATAGGTTT 57.057 29.630 0.00 0.00 0.00 3.27
468 626 8.539544 CCCCTCAAATAAAAATGTCAATAGGTT 58.460 33.333 0.00 0.00 0.00 3.50
469 627 7.125659 CCCCCTCAAATAAAAATGTCAATAGGT 59.874 37.037 0.00 0.00 0.00 3.08
470 628 7.344352 TCCCCCTCAAATAAAAATGTCAATAGG 59.656 37.037 0.00 0.00 0.00 2.57
471 629 8.197439 GTCCCCCTCAAATAAAAATGTCAATAG 58.803 37.037 0.00 0.00 0.00 1.73
472 630 7.898636 AGTCCCCCTCAAATAAAAATGTCAATA 59.101 33.333 0.00 0.00 0.00 1.90
473 631 6.730507 AGTCCCCCTCAAATAAAAATGTCAAT 59.269 34.615 0.00 0.00 0.00 2.57
474 632 6.014669 CAGTCCCCCTCAAATAAAAATGTCAA 60.015 38.462 0.00 0.00 0.00 3.18
475 633 5.480073 CAGTCCCCCTCAAATAAAAATGTCA 59.520 40.000 0.00 0.00 0.00 3.58
476 634 5.480422 ACAGTCCCCCTCAAATAAAAATGTC 59.520 40.000 0.00 0.00 0.00 3.06
477 635 5.402630 ACAGTCCCCCTCAAATAAAAATGT 58.597 37.500 0.00 0.00 0.00 2.71
478 636 7.475137 TTACAGTCCCCCTCAAATAAAAATG 57.525 36.000 0.00 0.00 0.00 2.32
479 637 7.344612 GGATTACAGTCCCCCTCAAATAAAAAT 59.655 37.037 0.00 0.00 31.82 1.82
480 638 6.666113 GGATTACAGTCCCCCTCAAATAAAAA 59.334 38.462 0.00 0.00 31.82 1.94
481 639 6.192044 GGATTACAGTCCCCCTCAAATAAAA 58.808 40.000 0.00 0.00 31.82 1.52
482 640 5.254267 TGGATTACAGTCCCCCTCAAATAAA 59.746 40.000 0.00 0.00 37.48 1.40
483 641 4.791334 TGGATTACAGTCCCCCTCAAATAA 59.209 41.667 0.00 0.00 37.48 1.40
484 642 4.376223 TGGATTACAGTCCCCCTCAAATA 58.624 43.478 0.00 0.00 37.48 1.40
485 643 3.197983 TGGATTACAGTCCCCCTCAAAT 58.802 45.455 0.00 0.00 37.48 2.32
486 644 2.638325 TGGATTACAGTCCCCCTCAAA 58.362 47.619 0.00 0.00 37.48 2.69
487 645 2.352561 TGGATTACAGTCCCCCTCAA 57.647 50.000 0.00 0.00 37.48 3.02
488 646 2.352561 TTGGATTACAGTCCCCCTCA 57.647 50.000 0.00 0.00 37.48 3.86
489 647 2.158608 CCATTGGATTACAGTCCCCCTC 60.159 54.545 0.00 0.00 37.48 4.30
490 648 1.852965 CCATTGGATTACAGTCCCCCT 59.147 52.381 0.00 0.00 37.48 4.79
491 649 1.569072 ACCATTGGATTACAGTCCCCC 59.431 52.381 10.37 0.00 37.48 5.40
492 650 4.513406 TTACCATTGGATTACAGTCCCC 57.487 45.455 10.37 0.00 37.48 4.81
493 651 6.624204 CGTTTTTACCATTGGATTACAGTCCC 60.624 42.308 10.37 0.00 37.48 4.46
494 652 6.319399 CGTTTTTACCATTGGATTACAGTCC 58.681 40.000 10.37 0.00 38.81 3.85
495 653 6.319399 CCGTTTTTACCATTGGATTACAGTC 58.681 40.000 10.37 0.00 0.00 3.51
496 654 5.336134 GCCGTTTTTACCATTGGATTACAGT 60.336 40.000 10.37 0.00 0.00 3.55
497 655 5.099575 GCCGTTTTTACCATTGGATTACAG 58.900 41.667 10.37 0.00 0.00 2.74
498 656 4.082136 GGCCGTTTTTACCATTGGATTACA 60.082 41.667 10.37 0.00 0.00 2.41
502 660 2.495669 CAGGCCGTTTTTACCATTGGAT 59.504 45.455 10.37 0.00 0.00 3.41
597 755 1.079336 GGGTAGGGAACACACTCGC 60.079 63.158 0.00 0.00 0.00 5.03
695 886 4.148825 CTTGGAGGCGGGGAGACG 62.149 72.222 0.00 0.00 0.00 4.18
696 887 4.475135 GCTTGGAGGCGGGGAGAC 62.475 72.222 0.00 0.00 0.00 3.36
697 888 3.311511 TAGCTTGGAGGCGGGGAGA 62.312 63.158 0.00 0.00 37.29 3.71
698 889 2.764128 TAGCTTGGAGGCGGGGAG 60.764 66.667 0.00 0.00 37.29 4.30
699 890 3.081409 GTAGCTTGGAGGCGGGGA 61.081 66.667 0.00 0.00 37.29 4.81
737 928 2.436115 GGGGCAGCAGTACGGAAC 60.436 66.667 0.00 0.00 0.00 3.62
906 1117 1.185618 CGAGAACCCTGTCCTCCACA 61.186 60.000 0.00 0.00 0.00 4.17
945 1162 3.365265 CCAACAACTCCCCTGCGC 61.365 66.667 0.00 0.00 0.00 6.09
947 1164 2.991540 GGCCAACAACTCCCCTGC 60.992 66.667 0.00 0.00 0.00 4.85
948 1165 1.604593 CAGGCCAACAACTCCCCTG 60.605 63.158 5.01 0.00 37.35 4.45
949 1166 2.846532 CAGGCCAACAACTCCCCT 59.153 61.111 5.01 0.00 0.00 4.79
951 1168 2.116125 AGCAGGCCAACAACTCCC 59.884 61.111 5.01 0.00 0.00 4.30
953 1170 1.860484 GAGCAGCAGGCCAACAACTC 61.860 60.000 5.01 1.99 46.50 3.01
956 1173 2.598394 GGAGCAGCAGGCCAACAA 60.598 61.111 5.01 0.00 46.50 2.83
996 1232 8.106462 TGTTTGGAGATAGAAATTACCATGTGA 58.894 33.333 0.00 0.00 0.00 3.58
1054 1290 4.971830 CGTATTACAGTTCGATTTCGGCTA 59.028 41.667 0.00 0.00 40.29 3.93
1077 1313 3.310303 GCTCGATGCATAAACACAGTC 57.690 47.619 0.00 0.00 42.31 3.51
1223 1461 3.397849 GGTACGGAGGAAGTGTTTTCT 57.602 47.619 0.00 0.00 0.00 2.52
1239 1477 2.662006 GTACCCTTCAAGTCCGGTAC 57.338 55.000 0.00 5.91 42.80 3.34
1303 1541 1.660607 CATTCGAGGTTCATGACACGG 59.339 52.381 0.00 0.00 32.99 4.94
1318 1556 2.128821 CAGAGATCAGCTGCTCATTCG 58.871 52.381 19.13 1.72 33.62 3.34
1319 1557 3.125316 GACAGAGATCAGCTGCTCATTC 58.875 50.000 19.13 9.17 36.86 2.67
1320 1558 2.481622 CGACAGAGATCAGCTGCTCATT 60.482 50.000 19.13 7.26 36.86 2.57
1321 1559 1.067364 CGACAGAGATCAGCTGCTCAT 59.933 52.381 19.13 8.67 36.86 2.90
1322 1560 0.455005 CGACAGAGATCAGCTGCTCA 59.545 55.000 19.13 0.00 36.86 4.26
1323 1561 0.737804 TCGACAGAGATCAGCTGCTC 59.262 55.000 9.47 9.53 36.86 4.26
1324 1562 2.879372 TCGACAGAGATCAGCTGCT 58.121 52.632 9.47 0.00 36.86 4.24
1377 1615 9.988815 CAATATATTCCACTACTTGCTAAGACT 57.011 33.333 0.00 0.00 0.00 3.24
1508 1746 3.881688 AGCTCAATCATGTTATCACCTGC 59.118 43.478 0.00 0.00 0.00 4.85
1528 1766 3.505293 AGCCATCTTGAAGTTGAGAAAGC 59.495 43.478 4.89 0.12 0.00 3.51
1580 1823 1.536766 CTCTGCAGTTTTTCGATGGCA 59.463 47.619 14.67 0.00 0.00 4.92
1584 1827 7.602644 TGATAAGTAACTCTGCAGTTTTTCGAT 59.397 33.333 14.67 5.51 40.16 3.59
1606 1849 9.219603 GGAGTAAATAACAGCTTATGCATGATA 57.780 33.333 10.16 0.00 42.74 2.15
1609 1852 7.263100 TGGAGTAAATAACAGCTTATGCATG 57.737 36.000 10.16 0.00 42.74 4.06
1632 1875 4.853196 GCAGTTGTTGTGCATAAGTACATG 59.147 41.667 0.00 0.00 40.12 3.21
1648 1891 5.423610 AGAATATAGACAGACCTGCAGTTGT 59.576 40.000 13.81 13.66 0.00 3.32
1690 1933 1.423541 AGAACAACACCCATGTGCCTA 59.576 47.619 0.00 0.00 46.86 3.93
1696 1939 3.753272 CCAAGTAGAGAACAACACCCATG 59.247 47.826 0.00 0.00 0.00 3.66
1743 1986 5.471116 TCATCAAGAATATGAGCAATTCGGG 59.529 40.000 0.00 0.00 38.20 5.14
1756 1999 7.443302 AGAGATGGGAAGTTCATCAAGAATA 57.557 36.000 5.01 0.00 42.38 1.75
1875 2118 7.076842 CATTCTACTTACACCACAAGAATGG 57.923 40.000 12.76 0.00 43.11 3.16
1930 2182 6.774656 AGAAATCACATGGTCAAGAAGTTTCT 59.225 34.615 0.00 0.00 39.74 2.52
1931 2183 6.974965 AGAAATCACATGGTCAAGAAGTTTC 58.025 36.000 0.00 0.00 0.00 2.78
2357 2613 3.913799 TCTTGGGACATTGACCCTTAAGA 59.086 43.478 22.13 19.43 46.82 2.10
2591 2848 2.517959 CCCCTCTCAACAAGCAATCAA 58.482 47.619 0.00 0.00 0.00 2.57
2797 3054 6.037500 TCAGAACTATGCTCAAATCGAAATGG 59.962 38.462 0.00 0.00 0.00 3.16
2822 3079 3.884895 TCCATGTGTTCGCTCCAAATAT 58.115 40.909 0.00 0.00 0.00 1.28
2964 3223 2.755650 AGGCTAGTTGAACAACAGTCG 58.244 47.619 17.85 6.01 43.47 4.18
3064 3364 5.486526 ACAGATGAAATGAGACTTCTCCAC 58.513 41.667 3.77 0.00 42.20 4.02
3094 3394 9.720769 CTACCCTCTGATAAAGTAAACAGAAAA 57.279 33.333 0.00 0.00 38.60 2.29
3097 3397 8.431910 AACTACCCTCTGATAAAGTAAACAGA 57.568 34.615 0.00 0.00 37.71 3.41
3305 3605 6.913170 TGCAGGTAGTCAATTGAGAAAATTC 58.087 36.000 8.80 0.00 0.00 2.17
3323 3623 0.322816 ATCCGTGAATGCTTGCAGGT 60.323 50.000 0.87 0.00 0.00 4.00
3375 3675 4.667262 TGTTTTTGTTTCACATCTGACCG 58.333 39.130 0.00 0.00 0.00 4.79
3524 3830 0.318529 CACGAGAGATCATCAGGCGG 60.319 60.000 0.00 0.00 0.00 6.13
3604 3910 9.927668 ACATCCAGAAGTATAACCAAAATTTTG 57.072 29.630 21.65 21.65 37.90 2.44
3609 3915 6.370442 CACGACATCCAGAAGTATAACCAAAA 59.630 38.462 0.00 0.00 0.00 2.44
3689 4000 4.088634 AGCAACCAAGAAATAAGGCATCA 58.911 39.130 0.00 0.00 0.00 3.07
3692 4003 6.014669 ACAATTAGCAACCAAGAAATAAGGCA 60.015 34.615 0.00 0.00 0.00 4.75
3693 4004 6.398095 ACAATTAGCAACCAAGAAATAAGGC 58.602 36.000 0.00 0.00 0.00 4.35
3694 4005 7.872483 ACAACAATTAGCAACCAAGAAATAAGG 59.128 33.333 0.00 0.00 0.00 2.69
3695 4006 8.816640 ACAACAATTAGCAACCAAGAAATAAG 57.183 30.769 0.00 0.00 0.00 1.73
3696 4007 8.417106 TGACAACAATTAGCAACCAAGAAATAA 58.583 29.630 0.00 0.00 0.00 1.40
3697 4008 7.946207 TGACAACAATTAGCAACCAAGAAATA 58.054 30.769 0.00 0.00 0.00 1.40
3729 4040 3.724374 CATCCAATGGAATGCAATGGAC 58.276 45.455 13.77 0.00 42.57 4.02
3742 4053 1.826720 CAGTTTCCCACCCATCCAATG 59.173 52.381 0.00 0.00 0.00 2.82
3749 4060 0.260230 TTGAAGCAGTTTCCCACCCA 59.740 50.000 0.00 0.00 34.77 4.51
3756 4067 4.781071 CAGACTGTCATTGAAGCAGTTTC 58.219 43.478 10.88 1.43 42.71 2.78
3762 4088 3.004106 ACAAAGCAGACTGTCATTGAAGC 59.996 43.478 17.91 4.25 0.00 3.86
3763 4089 4.825546 ACAAAGCAGACTGTCATTGAAG 57.174 40.909 17.91 0.00 0.00 3.02
3764 4090 4.734402 GCAACAAAGCAGACTGTCATTGAA 60.734 41.667 17.91 0.00 0.00 2.69
3766 4092 3.047796 GCAACAAAGCAGACTGTCATTG 58.952 45.455 10.88 11.26 0.00 2.82
3767 4093 2.689471 TGCAACAAAGCAGACTGTCATT 59.311 40.909 10.88 0.00 40.11 2.57
3768 4094 2.300433 TGCAACAAAGCAGACTGTCAT 58.700 42.857 10.88 0.00 40.11 3.06
3798 4152 4.339247 AGGAACTGAAATTTCATATGGCGG 59.661 41.667 20.76 10.08 37.18 6.13
3869 4223 7.203910 CACATTTCTCTAGATACACCTGGTAC 58.796 42.308 0.00 0.00 34.07 3.34
3870 4224 6.183360 GCACATTTCTCTAGATACACCTGGTA 60.183 42.308 0.00 0.00 36.16 3.25
3871 4225 5.395768 GCACATTTCTCTAGATACACCTGGT 60.396 44.000 0.00 0.00 0.00 4.00
3872 4226 5.053145 GCACATTTCTCTAGATACACCTGG 58.947 45.833 0.00 0.00 0.00 4.45
3877 4231 3.384789 AGCCGCACATTTCTCTAGATACA 59.615 43.478 0.00 0.00 0.00 2.29
3884 4238 1.302752 TGCAGCCGCACATTTCTCT 60.303 52.632 0.00 0.00 45.36 3.10
3964 4318 5.389516 CGGTCATTATTATACGCAAAGGAGC 60.390 44.000 0.00 0.00 0.00 4.70
3965 4319 5.924254 TCGGTCATTATTATACGCAAAGGAG 59.076 40.000 0.00 0.00 0.00 3.69
3966 4320 5.845103 TCGGTCATTATTATACGCAAAGGA 58.155 37.500 0.00 0.00 0.00 3.36
3967 4321 6.360329 GTTCGGTCATTATTATACGCAAAGG 58.640 40.000 0.00 0.00 0.00 3.11
3968 4322 6.062646 CGTTCGGTCATTATTATACGCAAAG 58.937 40.000 0.00 0.00 0.00 2.77
3969 4323 5.519566 ACGTTCGGTCATTATTATACGCAAA 59.480 36.000 0.00 0.00 0.00 3.68
3970 4324 5.042593 ACGTTCGGTCATTATTATACGCAA 58.957 37.500 0.00 0.00 0.00 4.85
3971 4325 4.609947 ACGTTCGGTCATTATTATACGCA 58.390 39.130 0.00 0.00 0.00 5.24
3972 4326 5.565723 AACGTTCGGTCATTATTATACGC 57.434 39.130 0.00 0.00 0.00 4.42
3973 4327 7.834529 AGAAAACGTTCGGTCATTATTATACG 58.165 34.615 0.00 0.00 38.90 3.06
3974 4328 9.977762 AAAGAAAACGTTCGGTCATTATTATAC 57.022 29.630 0.00 0.00 38.90 1.47
3976 4330 8.943002 AGAAAGAAAACGTTCGGTCATTATTAT 58.057 29.630 0.00 0.00 38.90 1.28
3977 4331 8.314143 AGAAAGAAAACGTTCGGTCATTATTA 57.686 30.769 0.00 0.00 38.90 0.98
3978 4332 7.198306 AGAAAGAAAACGTTCGGTCATTATT 57.802 32.000 0.00 0.00 38.90 1.40
3979 4333 6.796705 AGAAAGAAAACGTTCGGTCATTAT 57.203 33.333 0.00 0.00 38.90 1.28
3980 4334 6.607735 AAGAAAGAAAACGTTCGGTCATTA 57.392 33.333 0.00 0.00 38.90 1.90
3981 4335 5.494632 AAGAAAGAAAACGTTCGGTCATT 57.505 34.783 0.00 0.00 38.90 2.57
3982 4336 5.270853 CAAAGAAAGAAAACGTTCGGTCAT 58.729 37.500 0.00 0.00 38.90 3.06
3983 4337 4.654015 CAAAGAAAGAAAACGTTCGGTCA 58.346 39.130 0.00 0.00 38.90 4.02
3984 4338 3.481028 GCAAAGAAAGAAAACGTTCGGTC 59.519 43.478 0.00 0.00 38.90 4.79
3985 4339 3.119779 TGCAAAGAAAGAAAACGTTCGGT 60.120 39.130 0.00 0.00 38.90 4.69
3986 4340 3.430931 TGCAAAGAAAGAAAACGTTCGG 58.569 40.909 0.00 0.00 38.90 4.30
3987 4341 4.603825 GCATGCAAAGAAAGAAAACGTTCG 60.604 41.667 14.21 0.00 38.90 3.95
3988 4342 4.267452 TGCATGCAAAGAAAGAAAACGTTC 59.733 37.500 20.30 0.00 0.00 3.95
3989 4343 4.180057 TGCATGCAAAGAAAGAAAACGTT 58.820 34.783 20.30 0.00 0.00 3.99
3990 4344 3.779759 TGCATGCAAAGAAAGAAAACGT 58.220 36.364 20.30 0.00 0.00 3.99
3991 4345 4.445052 TGATGCATGCAAAGAAAGAAAACG 59.555 37.500 26.68 0.00 0.00 3.60
3992 4346 5.234757 TGTGATGCATGCAAAGAAAGAAAAC 59.765 36.000 26.68 10.70 0.00 2.43
3993 4347 5.358090 TGTGATGCATGCAAAGAAAGAAAA 58.642 33.333 26.68 0.00 0.00 2.29
3994 4348 4.946445 TGTGATGCATGCAAAGAAAGAAA 58.054 34.783 26.68 0.00 0.00 2.52
3995 4349 4.552355 CTGTGATGCATGCAAAGAAAGAA 58.448 39.130 26.68 4.41 0.00 2.52
3996 4350 3.057104 CCTGTGATGCATGCAAAGAAAGA 60.057 43.478 26.68 6.31 0.00 2.52
3997 4351 3.057104 TCCTGTGATGCATGCAAAGAAAG 60.057 43.478 26.68 17.41 0.00 2.62
3998 4352 2.892215 TCCTGTGATGCATGCAAAGAAA 59.108 40.909 26.68 8.79 0.00 2.52
3999 4353 2.516906 TCCTGTGATGCATGCAAAGAA 58.483 42.857 26.68 10.27 0.00 2.52
4000 4354 2.203470 TCCTGTGATGCATGCAAAGA 57.797 45.000 26.68 13.63 0.00 2.52
4001 4355 2.809446 CATCCTGTGATGCATGCAAAG 58.191 47.619 26.68 18.44 41.81 2.77
4002 4356 2.951457 CATCCTGTGATGCATGCAAA 57.049 45.000 26.68 13.68 41.81 3.68
4023 4413 6.759272 TGTGGTTCATACTAAGATATCCAGC 58.241 40.000 0.00 0.00 0.00 4.85
4132 4522 6.300354 ACGGAGGCATTCTAATTTAAATCG 57.700 37.500 0.10 0.00 0.00 3.34
4147 4537 4.422057 TCTTATATTATGGGACGGAGGCA 58.578 43.478 0.00 0.00 0.00 4.75
4149 4539 7.899648 ACTATCTTATATTATGGGACGGAGG 57.100 40.000 0.00 0.00 0.00 4.30
4220 4660 2.846827 CTCCCTCCACAACTATTCCCTT 59.153 50.000 0.00 0.00 0.00 3.95
4226 4666 8.881262 CCTTAATAATACTCCCTCCACAACTAT 58.119 37.037 0.00 0.00 0.00 2.12
4261 4707 8.483307 TCAAATAGGTCCATACGTCTAAAAAC 57.517 34.615 0.00 0.00 0.00 2.43
4327 4786 8.743085 TCTCATTCATAGCTGCTAGAAAAATT 57.257 30.769 15.41 2.30 0.00 1.82
4328 4787 8.784994 CATCTCATTCATAGCTGCTAGAAAAAT 58.215 33.333 15.41 8.67 0.00 1.82
4337 5183 3.666274 AGCTCATCTCATTCATAGCTGC 58.334 45.455 0.00 0.00 38.79 5.25
4409 5255 9.372369 CTCTTTTACTAACTCAAGATTACCTGG 57.628 37.037 0.00 0.00 0.00 4.45
4475 5326 5.457148 GCTGAAGATATGTCTCGTACACTTG 59.543 44.000 0.00 0.00 42.09 3.16
4479 5330 6.710744 TGATAGCTGAAGATATGTCTCGTACA 59.289 38.462 0.00 0.00 43.86 2.90
4511 5362 1.875420 TTCCGAACGTCCGTGCCATA 61.875 55.000 0.00 0.00 0.00 2.74
4512 5363 2.515996 ATTCCGAACGTCCGTGCCAT 62.516 55.000 0.00 0.00 0.00 4.40
4515 5366 0.575390 CATATTCCGAACGTCCGTGC 59.425 55.000 0.00 0.00 0.00 5.34
4520 5371 5.462068 TCAATCACATCATATTCCGAACGTC 59.538 40.000 0.00 0.00 0.00 4.34
4529 5380 6.257994 ACTCACCCTCAATCACATCATATT 57.742 37.500 0.00 0.00 0.00 1.28
4562 5419 6.980978 CAGTACATCTATTTGATCGACAGGTT 59.019 38.462 0.00 0.00 32.05 3.50
4564 5421 5.403766 GCAGTACATCTATTTGATCGACAGG 59.596 44.000 0.00 0.00 32.05 4.00
4565 5422 5.979517 TGCAGTACATCTATTTGATCGACAG 59.020 40.000 0.00 0.00 32.05 3.51
4570 5427 6.257849 TCCGTTTGCAGTACATCTATTTGATC 59.742 38.462 0.00 0.00 32.05 2.92
4577 5434 2.734175 CGCTCCGTTTGCAGTACATCTA 60.734 50.000 0.00 0.00 0.00 1.98
4582 5439 0.666577 AGTCGCTCCGTTTGCAGTAC 60.667 55.000 0.00 0.00 0.00 2.73
4583 5440 0.883153 TAGTCGCTCCGTTTGCAGTA 59.117 50.000 0.00 0.00 0.00 2.74
4584 5441 0.246635 ATAGTCGCTCCGTTTGCAGT 59.753 50.000 0.00 0.00 0.00 4.40
4616 5481 6.063496 AGTTAAAATACCACTCCCTTCCTC 57.937 41.667 0.00 0.00 0.00 3.71
4617 5482 6.464530 AAGTTAAAATACCACTCCCTTCCT 57.535 37.500 0.00 0.00 0.00 3.36
4618 5483 8.640063 TTAAAGTTAAAATACCACTCCCTTCC 57.360 34.615 0.00 0.00 0.00 3.46
4621 5486 9.816787 TGATTTAAAGTTAAAATACCACTCCCT 57.183 29.630 0.62 0.00 36.35 4.20
4625 5490 9.869757 GGCATGATTTAAAGTTAAAATACCACT 57.130 29.630 0.00 0.00 36.35 4.00
4626 5491 9.646427 TGGCATGATTTAAAGTTAAAATACCAC 57.354 29.630 0.00 0.00 36.35 4.16
4627 5492 9.646427 GTGGCATGATTTAAAGTTAAAATACCA 57.354 29.630 0.00 0.00 36.35 3.25
4628 5493 9.093970 GGTGGCATGATTTAAAGTTAAAATACC 57.906 33.333 0.00 0.00 36.35 2.73
4629 5494 9.093970 GGGTGGCATGATTTAAAGTTAAAATAC 57.906 33.333 0.00 0.00 36.35 1.89
4630 5495 7.976734 CGGGTGGCATGATTTAAAGTTAAAATA 59.023 33.333 0.00 0.00 36.35 1.40
4631 5496 6.816140 CGGGTGGCATGATTTAAAGTTAAAAT 59.184 34.615 0.00 0.00 36.35 1.82
4632 5497 6.159988 CGGGTGGCATGATTTAAAGTTAAAA 58.840 36.000 0.00 0.00 36.35 1.52
4633 5498 5.715070 CGGGTGGCATGATTTAAAGTTAAA 58.285 37.500 0.00 0.00 37.08 1.52
4634 5499 4.381079 GCGGGTGGCATGATTTAAAGTTAA 60.381 41.667 0.00 0.00 42.87 2.01
4635 5500 3.129638 GCGGGTGGCATGATTTAAAGTTA 59.870 43.478 0.00 0.00 42.87 2.24
4636 5501 2.094234 GCGGGTGGCATGATTTAAAGTT 60.094 45.455 0.00 0.00 42.87 2.66
4637 5502 1.476488 GCGGGTGGCATGATTTAAAGT 59.524 47.619 0.00 0.00 42.87 2.66
4638 5503 2.208326 GCGGGTGGCATGATTTAAAG 57.792 50.000 0.00 0.00 42.87 1.85
4649 5514 3.371087 TTTTTCTTTTGCGGGTGGC 57.629 47.368 0.00 0.00 43.96 5.01
4665 5530 2.184066 GCGGCCGGCATGATTTTT 59.816 55.556 30.85 0.00 42.87 1.94
4666 5531 4.191950 CGCGGCCGGCATGATTTT 62.192 61.111 30.85 0.00 43.84 1.82
4682 5547 0.721155 CGGTGAACATTTGCGACACG 60.721 55.000 0.00 0.00 33.08 4.49
4683 5548 0.306533 ACGGTGAACATTTGCGACAC 59.693 50.000 0.00 0.00 0.00 3.67
4684 5549 1.018148 AACGGTGAACATTTGCGACA 58.982 45.000 0.00 0.00 0.00 4.35
4685 5550 2.953640 TAACGGTGAACATTTGCGAC 57.046 45.000 0.00 0.00 0.00 5.19
4686 5551 4.691685 ACTAATAACGGTGAACATTTGCGA 59.308 37.500 0.00 0.00 0.00 5.10
4687 5552 4.965062 ACTAATAACGGTGAACATTTGCG 58.035 39.130 0.00 0.00 0.00 4.85
4688 5553 8.730970 TTAAACTAATAACGGTGAACATTTGC 57.269 30.769 0.00 0.00 0.00 3.68
4692 5557 8.385111 CGTGATTAAACTAATAACGGTGAACAT 58.615 33.333 7.99 0.00 45.15 2.71
4693 5558 7.731720 CGTGATTAAACTAATAACGGTGAACA 58.268 34.615 7.99 0.00 45.15 3.18
4701 5566 8.922058 TCTCCTGACGTGATTAAACTAATAAC 57.078 34.615 0.00 0.00 0.00 1.89
4702 5567 9.582431 CTTCTCCTGACGTGATTAAACTAATAA 57.418 33.333 0.00 0.00 0.00 1.40
4703 5568 8.746530 ACTTCTCCTGACGTGATTAAACTAATA 58.253 33.333 0.00 0.00 0.00 0.98
4704 5569 7.612677 ACTTCTCCTGACGTGATTAAACTAAT 58.387 34.615 0.00 0.00 0.00 1.73
4705 5570 6.989659 ACTTCTCCTGACGTGATTAAACTAA 58.010 36.000 0.00 0.00 0.00 2.24
4706 5571 6.585695 ACTTCTCCTGACGTGATTAAACTA 57.414 37.500 0.00 0.00 0.00 2.24
4707 5572 5.470047 ACTTCTCCTGACGTGATTAAACT 57.530 39.130 0.00 0.00 0.00 2.66
4708 5573 7.674240 GCATAACTTCTCCTGACGTGATTAAAC 60.674 40.741 0.00 0.00 0.00 2.01
4709 5574 6.312918 GCATAACTTCTCCTGACGTGATTAAA 59.687 38.462 0.00 0.00 0.00 1.52
4710 5575 5.810587 GCATAACTTCTCCTGACGTGATTAA 59.189 40.000 0.00 0.00 0.00 1.40
4711 5576 5.348986 GCATAACTTCTCCTGACGTGATTA 58.651 41.667 0.00 0.00 0.00 1.75
4712 5577 4.184629 GCATAACTTCTCCTGACGTGATT 58.815 43.478 0.00 0.00 0.00 2.57
4713 5578 3.430929 GGCATAACTTCTCCTGACGTGAT 60.431 47.826 0.00 0.00 0.00 3.06
4714 5579 2.094182 GGCATAACTTCTCCTGACGTGA 60.094 50.000 0.00 0.00 0.00 4.35
4715 5580 2.271800 GGCATAACTTCTCCTGACGTG 58.728 52.381 0.00 0.00 0.00 4.49
4716 5581 1.207329 GGGCATAACTTCTCCTGACGT 59.793 52.381 0.00 0.00 0.00 4.34
4717 5582 1.802880 CGGGCATAACTTCTCCTGACG 60.803 57.143 0.00 0.00 0.00 4.35
4718 5583 1.207329 ACGGGCATAACTTCTCCTGAC 59.793 52.381 0.00 0.00 0.00 3.51
4719 5584 1.568504 ACGGGCATAACTTCTCCTGA 58.431 50.000 0.00 0.00 0.00 3.86
4720 5585 3.555168 GGATACGGGCATAACTTCTCCTG 60.555 52.174 0.00 0.00 0.00 3.86
4721 5586 2.633481 GGATACGGGCATAACTTCTCCT 59.367 50.000 0.00 0.00 0.00 3.69
4722 5587 2.367567 TGGATACGGGCATAACTTCTCC 59.632 50.000 0.00 0.00 42.51 3.71
4723 5588 3.746045 TGGATACGGGCATAACTTCTC 57.254 47.619 0.00 0.00 42.51 2.87
4724 5589 4.497291 TTTGGATACGGGCATAACTTCT 57.503 40.909 0.00 0.00 42.51 2.85
4725 5590 4.819630 TCATTTGGATACGGGCATAACTTC 59.180 41.667 0.00 0.00 42.51 3.01
4726 5591 4.787551 TCATTTGGATACGGGCATAACTT 58.212 39.130 0.00 0.00 42.51 2.66
4727 5592 4.141482 ACTCATTTGGATACGGGCATAACT 60.141 41.667 0.00 0.00 42.51 2.24
4728 5593 4.134563 ACTCATTTGGATACGGGCATAAC 58.865 43.478 0.00 0.00 42.51 1.89
4729 5594 4.431416 ACTCATTTGGATACGGGCATAA 57.569 40.909 0.00 0.00 42.51 1.90
4730 5595 5.554437 TTACTCATTTGGATACGGGCATA 57.446 39.130 0.00 0.00 42.51 3.14
4731 5596 4.431416 TTACTCATTTGGATACGGGCAT 57.569 40.909 0.00 0.00 42.51 4.40
4732 5597 3.916359 TTACTCATTTGGATACGGGCA 57.084 42.857 0.00 0.00 42.51 5.36
4733 5598 3.001939 CGTTTACTCATTTGGATACGGGC 59.998 47.826 0.00 0.00 42.51 6.13
4734 5599 4.186159 ACGTTTACTCATTTGGATACGGG 58.814 43.478 0.00 0.00 42.51 5.28
4735 5600 5.556470 CAACGTTTACTCATTTGGATACGG 58.444 41.667 0.00 0.00 42.51 4.02
4736 5601 5.019498 GCAACGTTTACTCATTTGGATACG 58.981 41.667 0.00 0.00 42.51 3.06
4737 5602 5.106475 TGGCAACGTTTACTCATTTGGATAC 60.106 40.000 0.00 0.00 42.51 2.24
4738 5603 5.004448 TGGCAACGTTTACTCATTTGGATA 58.996 37.500 0.00 0.00 42.51 2.59
4739 5604 3.823873 TGGCAACGTTTACTCATTTGGAT 59.176 39.130 0.00 0.00 42.51 3.41
4740 5605 3.215151 TGGCAACGTTTACTCATTTGGA 58.785 40.909 0.00 0.00 42.51 3.53
4741 5606 3.004315 ACTGGCAACGTTTACTCATTTGG 59.996 43.478 0.00 0.00 42.51 3.28
4742 5607 3.974401 CACTGGCAACGTTTACTCATTTG 59.026 43.478 0.00 0.00 42.51 2.32
4743 5608 3.630312 ACACTGGCAACGTTTACTCATTT 59.370 39.130 0.00 0.00 42.51 2.32
4744 5609 3.211045 ACACTGGCAACGTTTACTCATT 58.789 40.909 0.00 0.00 42.51 2.57
4745 5610 2.846193 ACACTGGCAACGTTTACTCAT 58.154 42.857 0.00 0.00 42.51 2.90
4746 5611 2.319136 ACACTGGCAACGTTTACTCA 57.681 45.000 0.00 0.00 42.51 3.41
4747 5612 3.064271 TCAAACACTGGCAACGTTTACTC 59.936 43.478 12.10 0.00 42.51 2.59
4748 5613 3.011119 TCAAACACTGGCAACGTTTACT 58.989 40.909 12.10 0.00 42.51 2.24
4749 5614 3.103007 GTCAAACACTGGCAACGTTTAC 58.897 45.455 12.10 0.00 42.51 2.01
4750 5615 2.747989 TGTCAAACACTGGCAACGTTTA 59.252 40.909 12.10 0.00 36.46 2.01
4751 5616 1.542030 TGTCAAACACTGGCAACGTTT 59.458 42.857 0.00 7.83 36.46 3.60
4752 5617 1.169577 TGTCAAACACTGGCAACGTT 58.830 45.000 0.00 0.00 36.46 3.99
4753 5618 1.065401 CATGTCAAACACTGGCAACGT 59.935 47.619 0.00 0.00 44.57 3.99
4754 5619 1.600164 CCATGTCAAACACTGGCAACG 60.600 52.381 0.00 0.00 44.57 4.10
4755 5620 1.680735 TCCATGTCAAACACTGGCAAC 59.319 47.619 0.00 0.00 44.57 4.17
4756 5621 1.680735 GTCCATGTCAAACACTGGCAA 59.319 47.619 0.00 0.00 44.57 4.52
4757 5622 1.317613 GTCCATGTCAAACACTGGCA 58.682 50.000 0.00 0.00 45.74 4.92
4758 5623 0.598065 GGTCCATGTCAAACACTGGC 59.402 55.000 0.00 0.00 31.35 4.85
4759 5624 0.874390 CGGTCCATGTCAAACACTGG 59.126 55.000 0.00 0.00 32.03 4.00
4760 5625 0.874390 CCGGTCCATGTCAAACACTG 59.126 55.000 0.00 0.00 0.00 3.66
4761 5626 0.472471 ACCGGTCCATGTCAAACACT 59.528 50.000 0.00 0.00 0.00 3.55
4762 5627 0.872388 GACCGGTCCATGTCAAACAC 59.128 55.000 24.75 0.00 0.00 3.32
4763 5628 0.470341 TGACCGGTCCATGTCAAACA 59.530 50.000 31.19 6.67 38.48 2.83
4764 5629 1.737793 GATGACCGGTCCATGTCAAAC 59.262 52.381 31.19 6.24 44.04 2.93
4765 5630 1.674519 CGATGACCGGTCCATGTCAAA 60.675 52.381 31.19 10.89 44.04 2.69
4766 5631 0.108377 CGATGACCGGTCCATGTCAA 60.108 55.000 31.19 11.69 44.04 3.18
4767 5632 1.515487 CGATGACCGGTCCATGTCA 59.485 57.895 31.19 13.16 44.86 3.58
4768 5633 1.883084 GCGATGACCGGTCCATGTC 60.883 63.158 31.19 20.82 39.04 3.06
4769 5634 2.186903 GCGATGACCGGTCCATGT 59.813 61.111 31.19 14.79 39.04 3.21
4776 5641 1.438651 TCAAGAAAAGCGATGACCGG 58.561 50.000 0.00 0.00 39.04 5.28
4777 5642 2.672874 TGATCAAGAAAAGCGATGACCG 59.327 45.455 0.00 0.00 42.21 4.79
4778 5643 3.181506 GGTGATCAAGAAAAGCGATGACC 60.182 47.826 0.00 0.00 36.49 4.02
4779 5644 3.436704 TGGTGATCAAGAAAAGCGATGAC 59.563 43.478 0.00 0.00 0.00 3.06
4780 5645 3.436704 GTGGTGATCAAGAAAAGCGATGA 59.563 43.478 0.00 0.00 0.00 2.92
4781 5646 3.189080 TGTGGTGATCAAGAAAAGCGATG 59.811 43.478 0.00 0.00 0.00 3.84
4782 5647 3.189287 GTGTGGTGATCAAGAAAAGCGAT 59.811 43.478 0.00 0.00 0.00 4.58
4783 5648 2.548057 GTGTGGTGATCAAGAAAAGCGA 59.452 45.455 0.00 0.00 0.00 4.93
4784 5649 2.350772 GGTGTGGTGATCAAGAAAAGCG 60.351 50.000 0.00 0.00 0.00 4.68
4785 5650 2.350772 CGGTGTGGTGATCAAGAAAAGC 60.351 50.000 0.00 0.00 0.00 3.51
4786 5651 2.878406 ACGGTGTGGTGATCAAGAAAAG 59.122 45.455 0.00 0.00 0.00 2.27
4787 5652 2.875933 GACGGTGTGGTGATCAAGAAAA 59.124 45.455 0.00 0.00 0.00 2.29
4788 5653 2.104111 AGACGGTGTGGTGATCAAGAAA 59.896 45.455 0.00 0.00 0.00 2.52
4789 5654 1.691976 AGACGGTGTGGTGATCAAGAA 59.308 47.619 0.00 0.00 0.00 2.52
4790 5655 1.272490 GAGACGGTGTGGTGATCAAGA 59.728 52.381 0.00 0.00 0.00 3.02
4791 5656 1.714794 GAGACGGTGTGGTGATCAAG 58.285 55.000 0.00 0.00 0.00 3.02
4792 5657 0.038618 CGAGACGGTGTGGTGATCAA 60.039 55.000 0.00 0.00 0.00 2.57
4793 5658 0.891904 TCGAGACGGTGTGGTGATCA 60.892 55.000 0.00 0.00 0.00 2.92
4794 5659 0.242825 TTCGAGACGGTGTGGTGATC 59.757 55.000 0.00 0.00 0.00 2.92
4795 5660 0.677288 TTTCGAGACGGTGTGGTGAT 59.323 50.000 0.00 0.00 0.00 3.06
4796 5661 0.460722 TTTTCGAGACGGTGTGGTGA 59.539 50.000 0.00 0.00 0.00 4.02
4797 5662 0.859232 CTTTTCGAGACGGTGTGGTG 59.141 55.000 0.00 0.00 0.00 4.17
4798 5663 0.462789 ACTTTTCGAGACGGTGTGGT 59.537 50.000 0.00 0.00 0.00 4.16
4799 5664 1.137513 GACTTTTCGAGACGGTGTGG 58.862 55.000 0.00 0.00 0.00 4.17
4800 5665 2.135664 AGACTTTTCGAGACGGTGTG 57.864 50.000 0.00 0.00 0.00 3.82
4801 5666 2.470821 CAAGACTTTTCGAGACGGTGT 58.529 47.619 0.00 0.00 0.00 4.16
4802 5667 1.192534 GCAAGACTTTTCGAGACGGTG 59.807 52.381 0.00 0.00 0.00 4.94
4803 5668 1.068741 AGCAAGACTTTTCGAGACGGT 59.931 47.619 0.00 0.00 0.00 4.83
4804 5669 1.784525 AGCAAGACTTTTCGAGACGG 58.215 50.000 0.00 0.00 0.00 4.79
4805 5670 3.238570 CGATAGCAAGACTTTTCGAGACG 59.761 47.826 0.00 0.00 35.80 4.18
4806 5671 4.030753 CACGATAGCAAGACTTTTCGAGAC 59.969 45.833 11.42 0.00 36.70 3.36
4807 5672 4.166523 CACGATAGCAAGACTTTTCGAGA 58.833 43.478 11.42 0.00 36.70 4.04
4808 5673 3.921021 ACACGATAGCAAGACTTTTCGAG 59.079 43.478 11.42 7.57 36.70 4.04
4809 5674 3.673338 CACACGATAGCAAGACTTTTCGA 59.327 43.478 11.42 0.00 36.70 3.71
4810 5675 3.978759 CACACGATAGCAAGACTTTTCG 58.021 45.455 0.00 5.52 38.24 3.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.