Multiple sequence alignment - TraesCS7B01G352500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G352500 chr7B 100.000 4140 0 0 1 4140 608916931 608912792 0.000000e+00 7646.0
1 TraesCS7B01G352500 chr7B 89.024 246 9 10 138 365 608922036 608921791 5.240000e-74 289.0
2 TraesCS7B01G352500 chr7D 93.794 3432 145 32 356 3745 561024779 561021374 0.000000e+00 5096.0
3 TraesCS7B01G352500 chr7D 86.118 389 30 5 1 369 611635827 611635443 8.340000e-107 398.0
4 TraesCS7B01G352500 chr7D 84.959 246 19 10 138 365 611640922 611640677 2.490000e-57 233.0
5 TraesCS7B01G352500 chr7D 85.470 117 10 1 751 867 129513135 129513026 9.400000e-22 115.0
6 TraesCS7B01G352500 chr7A 94.119 3367 127 33 368 3709 645106425 645103105 0.000000e+00 5055.0
7 TraesCS7B01G352500 chr7A 83.036 224 29 7 1 221 23257918 23257701 1.170000e-45 195.0
8 TraesCS7B01G352500 chr2B 89.147 387 20 9 1 367 79683037 79682653 2.920000e-126 462.0
9 TraesCS7B01G352500 chr2B 80.318 503 63 17 998 1492 100424534 100425008 8.520000e-92 348.0
10 TraesCS7B01G352500 chr3B 88.312 385 25 11 1 365 829497688 829497304 1.060000e-120 444.0
11 TraesCS7B01G352500 chr3B 88.021 384 27 10 1 365 43603707 43604090 1.770000e-118 436.0
12 TraesCS7B01G352500 chr3B 86.179 246 16 10 138 365 829502792 829502547 2.470000e-62 250.0
13 TraesCS7B01G352500 chr3B 93.007 143 9 1 224 365 43598707 43598849 1.510000e-49 207.0
14 TraesCS7B01G352500 chr1A 86.234 385 33 4 1 365 533444754 533445138 2.320000e-107 399.0
15 TraesCS7B01G352500 chr1A 84.615 117 11 1 751 867 138320604 138320495 4.380000e-20 110.0
16 TraesCS7B01G352500 chr6A 86.010 386 33 5 1 366 163150999 163151383 1.080000e-105 394.0
17 TraesCS7B01G352500 chr6A 83.806 247 22 12 137 365 163145896 163146142 6.970000e-53 219.0
18 TraesCS7B01G352500 chr3A 84.675 385 38 14 1 365 99481240 99481623 8.460000e-97 364.0
19 TraesCS7B01G352500 chr1B 83.710 221 31 5 1 220 557407849 557408065 1.950000e-48 204.0
20 TraesCS7B01G352500 chr4A 83.482 224 26 9 1 220 148034249 148034033 9.080000e-47 198.0
21 TraesCS7B01G352500 chr4A 95.000 40 1 1 4076 4114 467543842 467543803 1.240000e-05 62.1
22 TraesCS7B01G352500 chr5A 84.615 117 11 1 751 867 589301951 589302060 4.380000e-20 110.0
23 TraesCS7B01G352500 chr6B 84.483 116 10 2 753 867 124324915 124324807 1.570000e-19 108.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G352500 chr7B 608912792 608916931 4139 True 7646 7646 100.000 1 4140 1 chr7B.!!$R1 4139
1 TraesCS7B01G352500 chr7D 561021374 561024779 3405 True 5096 5096 93.794 356 3745 1 chr7D.!!$R2 3389
2 TraesCS7B01G352500 chr7A 645103105 645106425 3320 True 5055 5055 94.119 368 3709 1 chr7A.!!$R2 3341

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
275 276 0.034896 TTCTTCCTCCCTTCACACGC 59.965 55.000 0.00 0.0 0.00 5.34 F
477 483 0.099082 CGAGTTAGGTGGCGAGTCTC 59.901 60.000 0.00 0.0 0.00 3.36 F
1547 1596 0.391395 AGCAGCAGTAGCAGAAGCAG 60.391 55.000 0.00 0.0 45.49 4.24 F
2022 2071 1.020437 GCATGCTAGTCTGCCCTTTC 58.980 55.000 11.37 0.0 32.15 2.62 F
2518 2570 1.301874 CCTTCCCGTTGCGTTGGTA 60.302 57.895 0.00 0.0 0.00 3.25 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1547 1596 0.176449 GCTCATCATTTTGCCCCACC 59.824 55.000 0.00 0.0 0.00 4.61 R
2163 2215 1.069978 TCAGGATCGTGTTTGACTGCA 59.930 47.619 14.67 0.0 0.00 4.41 R
2932 2984 0.037882 CATGACCAGTGAGCGTGTCT 60.038 55.000 0.00 0.0 0.00 3.41 R
3019 3071 0.108138 AAGGCTGTAGCACATCGGAC 60.108 55.000 6.18 0.0 44.36 4.79 R
4042 4101 2.162208 GGAAGTCAAATGCTTCATCGCA 59.838 45.455 14.83 0.0 42.88 5.10 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.146640 GTTTTGCGCGGAATCACC 57.853 55.556 15.49 0.00 0.00 4.02
18 19 1.443702 GTTTTGCGCGGAATCACCC 60.444 57.895 15.49 0.00 34.64 4.61
46 47 4.118584 GCACCCTTGCCTGGAATT 57.881 55.556 0.00 0.00 43.66 2.17
47 48 3.281332 GCACCCTTGCCTGGAATTA 57.719 52.632 0.00 0.00 43.66 1.40
48 49 1.106285 GCACCCTTGCCTGGAATTAG 58.894 55.000 0.00 0.00 43.66 1.73
49 50 1.767759 CACCCTTGCCTGGAATTAGG 58.232 55.000 0.00 0.00 40.95 2.69
50 51 1.284785 CACCCTTGCCTGGAATTAGGA 59.715 52.381 0.00 0.00 40.42 2.94
51 52 1.566231 ACCCTTGCCTGGAATTAGGAG 59.434 52.381 0.00 0.00 40.42 3.69
52 53 1.566231 CCCTTGCCTGGAATTAGGAGT 59.434 52.381 0.00 0.00 40.42 3.85
53 54 2.024941 CCCTTGCCTGGAATTAGGAGTT 60.025 50.000 0.00 0.00 40.42 3.01
54 55 3.202151 CCCTTGCCTGGAATTAGGAGTTA 59.798 47.826 0.00 0.00 40.42 2.24
55 56 4.325030 CCCTTGCCTGGAATTAGGAGTTAA 60.325 45.833 0.00 0.00 40.42 2.01
56 57 5.449553 CCTTGCCTGGAATTAGGAGTTAAT 58.550 41.667 0.00 0.00 40.42 1.40
57 58 5.532779 CCTTGCCTGGAATTAGGAGTTAATC 59.467 44.000 0.00 0.00 40.42 1.75
58 59 4.703897 TGCCTGGAATTAGGAGTTAATCG 58.296 43.478 0.00 0.00 40.42 3.34
59 60 4.407621 TGCCTGGAATTAGGAGTTAATCGA 59.592 41.667 0.00 0.00 40.42 3.59
60 61 5.071788 TGCCTGGAATTAGGAGTTAATCGAT 59.928 40.000 0.00 0.00 40.42 3.59
61 62 5.409826 GCCTGGAATTAGGAGTTAATCGATG 59.590 44.000 0.00 0.00 40.42 3.84
62 63 5.934625 CCTGGAATTAGGAGTTAATCGATGG 59.065 44.000 0.00 0.00 40.42 3.51
63 64 6.239600 CCTGGAATTAGGAGTTAATCGATGGA 60.240 42.308 0.00 0.00 40.42 3.41
64 65 7.316393 TGGAATTAGGAGTTAATCGATGGAT 57.684 36.000 0.00 0.00 30.65 3.41
65 66 7.745717 TGGAATTAGGAGTTAATCGATGGATT 58.254 34.615 8.12 8.12 44.81 3.01
66 67 7.661437 TGGAATTAGGAGTTAATCGATGGATTG 59.339 37.037 12.73 0.00 42.72 2.67
67 68 7.878127 GGAATTAGGAGTTAATCGATGGATTGA 59.122 37.037 12.73 2.07 42.72 2.57
68 69 9.442047 GAATTAGGAGTTAATCGATGGATTGAT 57.558 33.333 12.73 0.00 42.72 2.57
69 70 9.442047 AATTAGGAGTTAATCGATGGATTGATC 57.558 33.333 12.73 7.71 42.72 2.92
70 71 5.473931 AGGAGTTAATCGATGGATTGATCG 58.526 41.667 12.73 0.00 45.43 3.69
71 72 4.092091 GGAGTTAATCGATGGATTGATCGC 59.908 45.833 12.73 5.29 44.04 4.58
72 73 3.997021 AGTTAATCGATGGATTGATCGCC 59.003 43.478 12.73 0.00 44.04 5.54
73 74 2.549064 AATCGATGGATTGATCGCCA 57.451 45.000 0.00 4.50 44.04 5.69
74 75 2.090400 ATCGATGGATTGATCGCCAG 57.910 50.000 0.00 0.00 44.04 4.85
75 76 1.039856 TCGATGGATTGATCGCCAGA 58.960 50.000 7.66 0.00 44.04 3.86
76 77 1.620323 TCGATGGATTGATCGCCAGAT 59.380 47.619 7.66 0.00 44.04 2.90
77 78 1.730612 CGATGGATTGATCGCCAGATG 59.269 52.381 7.66 0.00 38.90 2.90
78 79 2.775890 GATGGATTGATCGCCAGATGT 58.224 47.619 7.66 0.00 37.64 3.06
79 80 1.957668 TGGATTGATCGCCAGATGTG 58.042 50.000 0.00 0.00 37.19 3.21
95 96 5.180271 CAGATGTGGATGAAAATTTTGGGG 58.820 41.667 8.47 0.00 0.00 4.96
96 97 5.046448 CAGATGTGGATGAAAATTTTGGGGA 60.046 40.000 8.47 0.00 0.00 4.81
97 98 5.547276 AGATGTGGATGAAAATTTTGGGGAA 59.453 36.000 8.47 0.00 0.00 3.97
98 99 5.636903 TGTGGATGAAAATTTTGGGGAAA 57.363 34.783 8.47 0.00 0.00 3.13
99 100 5.372373 TGTGGATGAAAATTTTGGGGAAAC 58.628 37.500 8.47 0.85 0.00 2.78
100 101 5.104360 TGTGGATGAAAATTTTGGGGAAACA 60.104 36.000 8.47 3.38 0.00 2.83
101 102 5.469760 GTGGATGAAAATTTTGGGGAAACAG 59.530 40.000 8.47 0.00 0.00 3.16
102 103 5.367937 TGGATGAAAATTTTGGGGAAACAGA 59.632 36.000 8.47 0.00 0.00 3.41
103 104 5.934043 GGATGAAAATTTTGGGGAAACAGAG 59.066 40.000 8.47 0.00 0.00 3.35
104 105 5.289083 TGAAAATTTTGGGGAAACAGAGG 57.711 39.130 8.47 0.00 0.00 3.69
105 106 4.965532 TGAAAATTTTGGGGAAACAGAGGA 59.034 37.500 8.47 0.00 0.00 3.71
106 107 5.426833 TGAAAATTTTGGGGAAACAGAGGAA 59.573 36.000 8.47 0.00 0.00 3.36
107 108 5.551305 AAATTTTGGGGAAACAGAGGAAG 57.449 39.130 0.00 0.00 0.00 3.46
108 109 1.995376 TTTGGGGAAACAGAGGAAGC 58.005 50.000 0.00 0.00 0.00 3.86
109 110 0.250727 TTGGGGAAACAGAGGAAGCG 60.251 55.000 0.00 0.00 0.00 4.68
110 111 1.377333 GGGGAAACAGAGGAAGCGG 60.377 63.158 0.00 0.00 0.00 5.52
111 112 1.677552 GGGAAACAGAGGAAGCGGA 59.322 57.895 0.00 0.00 0.00 5.54
112 113 0.253327 GGGAAACAGAGGAAGCGGAT 59.747 55.000 0.00 0.00 0.00 4.18
113 114 1.657822 GGAAACAGAGGAAGCGGATC 58.342 55.000 0.00 0.00 0.00 3.36
114 115 1.281899 GAAACAGAGGAAGCGGATCG 58.718 55.000 0.00 0.00 0.00 3.69
115 116 0.895530 AAACAGAGGAAGCGGATCGA 59.104 50.000 0.00 0.00 0.00 3.59
116 117 1.115467 AACAGAGGAAGCGGATCGAT 58.885 50.000 0.00 0.00 0.00 3.59
117 118 1.982660 ACAGAGGAAGCGGATCGATA 58.017 50.000 0.00 0.00 0.00 2.92
118 119 1.609555 ACAGAGGAAGCGGATCGATAC 59.390 52.381 0.00 0.00 0.00 2.24
119 120 1.883275 CAGAGGAAGCGGATCGATACT 59.117 52.381 5.98 0.00 0.00 2.12
120 121 2.294791 CAGAGGAAGCGGATCGATACTT 59.705 50.000 5.98 6.78 0.00 2.24
121 122 2.294791 AGAGGAAGCGGATCGATACTTG 59.705 50.000 5.98 0.00 0.00 3.16
122 123 1.341531 AGGAAGCGGATCGATACTTGG 59.658 52.381 5.98 0.00 0.00 3.61
123 124 1.140816 GAAGCGGATCGATACTTGGC 58.859 55.000 5.98 1.72 0.00 4.52
124 125 0.753262 AAGCGGATCGATACTTGGCT 59.247 50.000 5.98 4.30 0.00 4.75
125 126 0.315568 AGCGGATCGATACTTGGCTC 59.684 55.000 5.98 0.00 0.00 4.70
126 127 0.315568 GCGGATCGATACTTGGCTCT 59.684 55.000 5.98 0.00 0.00 4.09
127 128 1.932604 GCGGATCGATACTTGGCTCTG 60.933 57.143 5.98 0.00 0.00 3.35
128 129 1.609072 CGGATCGATACTTGGCTCTGA 59.391 52.381 5.98 0.00 0.00 3.27
129 130 2.034685 CGGATCGATACTTGGCTCTGAA 59.965 50.000 5.98 0.00 0.00 3.02
130 131 3.305676 CGGATCGATACTTGGCTCTGAAT 60.306 47.826 5.98 0.00 0.00 2.57
131 132 4.082733 CGGATCGATACTTGGCTCTGAATA 60.083 45.833 5.98 0.00 0.00 1.75
132 133 5.164954 GGATCGATACTTGGCTCTGAATAC 58.835 45.833 0.00 0.00 0.00 1.89
133 134 4.585955 TCGATACTTGGCTCTGAATACC 57.414 45.455 0.00 0.00 0.00 2.73
134 135 3.958147 TCGATACTTGGCTCTGAATACCA 59.042 43.478 0.00 0.00 0.00 3.25
135 136 4.038042 TCGATACTTGGCTCTGAATACCAG 59.962 45.833 0.00 0.00 44.27 4.00
145 146 2.628178 TCTGAATACCAGATGCTACGGG 59.372 50.000 0.00 0.00 46.38 5.28
146 147 2.628178 CTGAATACCAGATGCTACGGGA 59.372 50.000 6.84 0.00 45.78 5.14
147 148 3.239449 TGAATACCAGATGCTACGGGAT 58.761 45.455 6.84 0.00 0.00 3.85
148 149 3.258372 TGAATACCAGATGCTACGGGATC 59.742 47.826 6.84 0.00 40.03 3.36
149 150 1.244816 TACCAGATGCTACGGGATCG 58.755 55.000 6.84 0.00 43.64 3.69
150 151 1.373497 CCAGATGCTACGGGATCGC 60.373 63.158 0.00 0.00 43.64 4.58
151 152 1.363807 CAGATGCTACGGGATCGCA 59.636 57.895 10.70 2.52 43.64 5.10
152 153 0.665670 CAGATGCTACGGGATCGCAG 60.666 60.000 10.70 5.44 43.64 5.18
156 157 3.706140 CTACGGGATCGCAGCAAC 58.294 61.111 10.70 0.00 40.63 4.17
157 158 1.141881 CTACGGGATCGCAGCAACT 59.858 57.895 10.70 0.00 40.63 3.16
158 159 0.872021 CTACGGGATCGCAGCAACTC 60.872 60.000 10.70 0.00 40.63 3.01
159 160 2.292794 TACGGGATCGCAGCAACTCC 62.293 60.000 10.70 0.00 40.63 3.85
160 161 2.586792 GGGATCGCAGCAACTCCT 59.413 61.111 4.64 0.00 0.00 3.69
161 162 1.078143 GGGATCGCAGCAACTCCTT 60.078 57.895 4.64 0.00 0.00 3.36
162 163 1.372087 GGGATCGCAGCAACTCCTTG 61.372 60.000 4.64 0.00 0.00 3.61
169 170 3.731136 GCAACTCCTTGCGTCACA 58.269 55.556 0.00 0.00 43.42 3.58
170 171 1.279840 GCAACTCCTTGCGTCACAC 59.720 57.895 0.00 0.00 43.42 3.82
171 172 1.941812 CAACTCCTTGCGTCACACC 59.058 57.895 0.00 0.00 0.00 4.16
172 173 0.813610 CAACTCCTTGCGTCACACCA 60.814 55.000 0.00 0.00 0.00 4.17
173 174 0.532862 AACTCCTTGCGTCACACCAG 60.533 55.000 0.00 0.00 0.00 4.00
174 175 1.669115 CTCCTTGCGTCACACCAGG 60.669 63.158 0.00 0.00 0.00 4.45
175 176 2.099652 CTCCTTGCGTCACACCAGGA 62.100 60.000 0.00 0.00 0.00 3.86
176 177 1.003355 CCTTGCGTCACACCAGGAT 60.003 57.895 0.00 0.00 0.00 3.24
177 178 1.300971 CCTTGCGTCACACCAGGATG 61.301 60.000 0.00 0.00 0.00 3.51
178 179 0.603707 CTTGCGTCACACCAGGATGT 60.604 55.000 0.00 0.00 0.00 3.06
189 190 2.586258 CCAGGATGTGGTAACGAGAG 57.414 55.000 0.00 0.00 42.17 3.20
190 191 1.137086 CCAGGATGTGGTAACGAGAGG 59.863 57.143 0.00 0.00 42.17 3.69
191 192 0.824759 AGGATGTGGTAACGAGAGGC 59.175 55.000 0.00 0.00 42.51 4.70
192 193 0.535335 GGATGTGGTAACGAGAGGCA 59.465 55.000 0.00 0.00 42.51 4.75
193 194 1.471676 GGATGTGGTAACGAGAGGCAG 60.472 57.143 0.00 0.00 42.51 4.85
194 195 1.476891 GATGTGGTAACGAGAGGCAGA 59.523 52.381 0.00 0.00 42.51 4.26
195 196 1.334160 TGTGGTAACGAGAGGCAGAA 58.666 50.000 0.00 0.00 42.51 3.02
196 197 1.272490 TGTGGTAACGAGAGGCAGAAG 59.728 52.381 0.00 0.00 42.51 2.85
197 198 0.895530 TGGTAACGAGAGGCAGAAGG 59.104 55.000 0.00 0.00 42.51 3.46
198 199 1.183549 GGTAACGAGAGGCAGAAGGA 58.816 55.000 0.00 0.00 0.00 3.36
199 200 1.549170 GGTAACGAGAGGCAGAAGGAA 59.451 52.381 0.00 0.00 0.00 3.36
200 201 2.028385 GGTAACGAGAGGCAGAAGGAAA 60.028 50.000 0.00 0.00 0.00 3.13
201 202 3.369576 GGTAACGAGAGGCAGAAGGAAAT 60.370 47.826 0.00 0.00 0.00 2.17
202 203 3.425162 AACGAGAGGCAGAAGGAAATT 57.575 42.857 0.00 0.00 0.00 1.82
203 204 2.704572 ACGAGAGGCAGAAGGAAATTG 58.295 47.619 0.00 0.00 0.00 2.32
204 205 1.399791 CGAGAGGCAGAAGGAAATTGC 59.600 52.381 0.00 0.00 37.11 3.56
205 206 1.399791 GAGAGGCAGAAGGAAATTGCG 59.600 52.381 0.00 0.00 38.69 4.85
206 207 1.168714 GAGGCAGAAGGAAATTGCGT 58.831 50.000 0.00 0.00 38.69 5.24
207 208 0.883833 AGGCAGAAGGAAATTGCGTG 59.116 50.000 0.00 0.00 38.69 5.34
208 209 0.109132 GGCAGAAGGAAATTGCGTGG 60.109 55.000 0.00 0.00 38.69 4.94
209 210 0.109132 GCAGAAGGAAATTGCGTGGG 60.109 55.000 0.00 0.00 0.00 4.61
210 211 0.527565 CAGAAGGAAATTGCGTGGGG 59.472 55.000 0.00 0.00 0.00 4.96
211 212 0.404040 AGAAGGAAATTGCGTGGGGA 59.596 50.000 0.00 0.00 0.00 4.81
212 213 0.811281 GAAGGAAATTGCGTGGGGAG 59.189 55.000 0.00 0.00 0.00 4.30
213 214 0.611896 AAGGAAATTGCGTGGGGAGG 60.612 55.000 0.00 0.00 0.00 4.30
214 215 2.710902 GGAAATTGCGTGGGGAGGC 61.711 63.158 0.00 0.00 0.00 4.70
215 216 1.976474 GAAATTGCGTGGGGAGGCA 60.976 57.895 0.00 0.00 37.39 4.75
216 217 1.937546 GAAATTGCGTGGGGAGGCAG 61.938 60.000 0.00 0.00 40.75 4.85
217 218 2.424842 AAATTGCGTGGGGAGGCAGA 62.425 55.000 0.00 0.00 40.75 4.26
218 219 2.424842 AATTGCGTGGGGAGGCAGAA 62.425 55.000 0.00 0.00 40.75 3.02
219 220 2.826777 ATTGCGTGGGGAGGCAGAAG 62.827 60.000 0.00 0.00 40.75 2.85
220 221 4.785453 GCGTGGGGAGGCAGAAGG 62.785 72.222 0.00 0.00 0.00 3.46
221 222 3.003173 CGTGGGGAGGCAGAAGGA 61.003 66.667 0.00 0.00 0.00 3.36
222 223 2.592993 CGTGGGGAGGCAGAAGGAA 61.593 63.158 0.00 0.00 0.00 3.36
223 224 1.767692 GTGGGGAGGCAGAAGGAAA 59.232 57.895 0.00 0.00 0.00 3.13
224 225 0.332972 GTGGGGAGGCAGAAGGAAAT 59.667 55.000 0.00 0.00 0.00 2.17
225 226 1.084018 TGGGGAGGCAGAAGGAAATT 58.916 50.000 0.00 0.00 0.00 1.82
226 227 1.005924 TGGGGAGGCAGAAGGAAATTC 59.994 52.381 0.00 0.00 38.28 2.17
227 228 1.686428 GGGGAGGCAGAAGGAAATTCC 60.686 57.143 3.29 3.29 38.84 3.01
228 229 1.005924 GGGAGGCAGAAGGAAATTCCA 59.994 52.381 15.21 0.00 39.61 3.53
229 230 2.373224 GGAGGCAGAAGGAAATTCCAG 58.627 52.381 15.21 2.36 39.61 3.86
230 231 2.025887 GGAGGCAGAAGGAAATTCCAGA 60.026 50.000 15.21 0.00 39.61 3.86
231 232 3.277715 GAGGCAGAAGGAAATTCCAGAG 58.722 50.000 15.21 2.36 39.61 3.35
232 233 2.915604 AGGCAGAAGGAAATTCCAGAGA 59.084 45.455 15.21 0.00 39.61 3.10
233 234 3.331889 AGGCAGAAGGAAATTCCAGAGAA 59.668 43.478 15.21 0.00 39.61 2.87
234 235 4.017683 AGGCAGAAGGAAATTCCAGAGAAT 60.018 41.667 15.21 0.00 44.86 2.40
235 236 5.192522 AGGCAGAAGGAAATTCCAGAGAATA 59.807 40.000 15.21 0.00 42.03 1.75
236 237 5.888161 GGCAGAAGGAAATTCCAGAGAATAA 59.112 40.000 15.21 0.00 42.03 1.40
237 238 6.548993 GGCAGAAGGAAATTCCAGAGAATAAT 59.451 38.462 15.21 0.00 42.03 1.28
238 239 7.424001 GCAGAAGGAAATTCCAGAGAATAATG 58.576 38.462 15.21 1.34 42.03 1.90
239 240 7.067981 GCAGAAGGAAATTCCAGAGAATAATGT 59.932 37.037 15.21 0.00 42.03 2.71
240 241 8.964772 CAGAAGGAAATTCCAGAGAATAATGTT 58.035 33.333 15.21 0.00 42.03 2.71
241 242 9.539194 AGAAGGAAATTCCAGAGAATAATGTTT 57.461 29.630 15.21 0.00 42.03 2.83
244 245 9.753674 AGGAAATTCCAGAGAATAATGTTTACA 57.246 29.630 15.21 0.00 42.03 2.41
249 250 9.807649 ATTCCAGAGAATAATGTTTACAATTGC 57.192 29.630 5.05 0.00 41.05 3.56
250 251 7.771183 TCCAGAGAATAATGTTTACAATTGCC 58.229 34.615 5.05 0.00 0.00 4.52
251 252 6.692681 CCAGAGAATAATGTTTACAATTGCCG 59.307 38.462 5.05 0.00 0.00 5.69
252 253 6.692681 CAGAGAATAATGTTTACAATTGCCGG 59.307 38.462 5.05 0.00 0.00 6.13
253 254 6.377146 AGAGAATAATGTTTACAATTGCCGGT 59.623 34.615 5.05 0.00 0.00 5.28
254 255 6.930731 AGAATAATGTTTACAATTGCCGGTT 58.069 32.000 5.05 0.00 0.00 4.44
255 256 6.811170 AGAATAATGTTTACAATTGCCGGTTG 59.189 34.615 5.05 1.91 0.00 3.77
256 257 4.329462 AATGTTTACAATTGCCGGTTGT 57.671 36.364 12.90 12.90 42.12 3.32
257 258 3.802948 TGTTTACAATTGCCGGTTGTT 57.197 38.095 13.47 0.00 40.13 2.83
258 259 3.707793 TGTTTACAATTGCCGGTTGTTC 58.292 40.909 13.47 6.62 40.13 3.18
259 260 3.381908 TGTTTACAATTGCCGGTTGTTCT 59.618 39.130 13.47 0.00 40.13 3.01
260 261 4.142138 TGTTTACAATTGCCGGTTGTTCTT 60.142 37.500 13.47 0.00 40.13 2.52
261 262 2.793278 ACAATTGCCGGTTGTTCTTC 57.207 45.000 5.05 0.00 36.44 2.87
262 263 1.339929 ACAATTGCCGGTTGTTCTTCC 59.660 47.619 5.05 0.00 36.44 3.46
263 264 1.613437 CAATTGCCGGTTGTTCTTCCT 59.387 47.619 1.90 0.00 0.00 3.36
264 265 1.534729 ATTGCCGGTTGTTCTTCCTC 58.465 50.000 1.90 0.00 0.00 3.71
265 266 0.536460 TTGCCGGTTGTTCTTCCTCC 60.536 55.000 1.90 0.00 0.00 4.30
266 267 1.674651 GCCGGTTGTTCTTCCTCCC 60.675 63.158 1.90 0.00 0.00 4.30
267 268 2.067197 CCGGTTGTTCTTCCTCCCT 58.933 57.895 0.00 0.00 0.00 4.20
268 269 0.400594 CCGGTTGTTCTTCCTCCCTT 59.599 55.000 0.00 0.00 0.00 3.95
269 270 1.610886 CCGGTTGTTCTTCCTCCCTTC 60.611 57.143 0.00 0.00 0.00 3.46
270 271 1.071699 CGGTTGTTCTTCCTCCCTTCA 59.928 52.381 0.00 0.00 0.00 3.02
271 272 2.505405 GGTTGTTCTTCCTCCCTTCAC 58.495 52.381 0.00 0.00 0.00 3.18
272 273 2.158667 GGTTGTTCTTCCTCCCTTCACA 60.159 50.000 0.00 0.00 0.00 3.58
273 274 2.879026 GTTGTTCTTCCTCCCTTCACAC 59.121 50.000 0.00 0.00 0.00 3.82
274 275 1.070134 TGTTCTTCCTCCCTTCACACG 59.930 52.381 0.00 0.00 0.00 4.49
275 276 0.034896 TTCTTCCTCCCTTCACACGC 59.965 55.000 0.00 0.00 0.00 5.34
276 277 0.832135 TCTTCCTCCCTTCACACGCT 60.832 55.000 0.00 0.00 0.00 5.07
277 278 0.895530 CTTCCTCCCTTCACACGCTA 59.104 55.000 0.00 0.00 0.00 4.26
278 279 0.895530 TTCCTCCCTTCACACGCTAG 59.104 55.000 0.00 0.00 0.00 3.42
279 280 1.153549 CCTCCCTTCACACGCTAGC 60.154 63.158 4.06 4.06 0.00 3.42
280 281 1.608717 CCTCCCTTCACACGCTAGCT 61.609 60.000 13.93 0.00 0.00 3.32
281 282 1.103803 CTCCCTTCACACGCTAGCTA 58.896 55.000 13.93 0.00 0.00 3.32
282 283 1.683917 CTCCCTTCACACGCTAGCTAT 59.316 52.381 13.93 0.00 0.00 2.97
283 284 2.885266 CTCCCTTCACACGCTAGCTATA 59.115 50.000 13.93 0.00 0.00 1.31
284 285 3.497332 TCCCTTCACACGCTAGCTATAT 58.503 45.455 13.93 0.00 0.00 0.86
285 286 4.659115 TCCCTTCACACGCTAGCTATATA 58.341 43.478 13.93 0.00 0.00 0.86
286 287 5.074804 TCCCTTCACACGCTAGCTATATAA 58.925 41.667 13.93 1.08 0.00 0.98
287 288 5.048224 TCCCTTCACACGCTAGCTATATAAC 60.048 44.000 13.93 0.00 0.00 1.89
288 289 5.278808 CCCTTCACACGCTAGCTATATAACA 60.279 44.000 13.93 0.00 0.00 2.41
289 290 6.213677 CCTTCACACGCTAGCTATATAACAA 58.786 40.000 13.93 0.00 0.00 2.83
290 291 6.868864 CCTTCACACGCTAGCTATATAACAAT 59.131 38.462 13.93 0.00 0.00 2.71
291 292 7.385205 CCTTCACACGCTAGCTATATAACAATT 59.615 37.037 13.93 0.00 0.00 2.32
292 293 7.869016 TCACACGCTAGCTATATAACAATTC 57.131 36.000 13.93 0.00 0.00 2.17
293 294 7.658261 TCACACGCTAGCTATATAACAATTCT 58.342 34.615 13.93 0.00 0.00 2.40
294 295 8.789762 TCACACGCTAGCTATATAACAATTCTA 58.210 33.333 13.93 0.00 0.00 2.10
295 296 9.574458 CACACGCTAGCTATATAACAATTCTAT 57.426 33.333 13.93 0.00 0.00 1.98
303 304 9.892130 AGCTATATAACAATTCTATTACAGGCC 57.108 33.333 0.00 0.00 0.00 5.19
304 305 9.667107 GCTATATAACAATTCTATTACAGGCCA 57.333 33.333 5.01 0.00 0.00 5.36
307 308 5.897377 AACAATTCTATTACAGGCCACAC 57.103 39.130 5.01 0.00 0.00 3.82
308 309 5.179452 ACAATTCTATTACAGGCCACACT 57.821 39.130 5.01 0.00 0.00 3.55
309 310 6.308015 ACAATTCTATTACAGGCCACACTA 57.692 37.500 5.01 0.00 0.00 2.74
310 311 6.349300 ACAATTCTATTACAGGCCACACTAG 58.651 40.000 5.01 0.00 0.00 2.57
311 312 5.552870 ATTCTATTACAGGCCACACTAGG 57.447 43.478 5.01 0.00 0.00 3.02
320 321 4.028490 CACACTAGGCCGGCCCAA 62.028 66.667 41.72 28.61 36.58 4.12
321 322 4.029809 ACACTAGGCCGGCCCAAC 62.030 66.667 41.72 17.85 36.58 3.77
333 334 3.061848 CCCAACGGCCATCCACAC 61.062 66.667 2.24 0.00 0.00 3.82
334 335 2.282110 CCAACGGCCATCCACACA 60.282 61.111 2.24 0.00 0.00 3.72
335 336 2.625823 CCAACGGCCATCCACACAC 61.626 63.158 2.24 0.00 0.00 3.82
336 337 1.600636 CAACGGCCATCCACACACT 60.601 57.895 2.24 0.00 0.00 3.55
337 338 1.302511 AACGGCCATCCACACACTC 60.303 57.895 2.24 0.00 0.00 3.51
338 339 2.050836 AACGGCCATCCACACACTCA 62.051 55.000 2.24 0.00 0.00 3.41
339 340 1.302431 CGGCCATCCACACACTCAA 60.302 57.895 2.24 0.00 0.00 3.02
340 341 1.300971 CGGCCATCCACACACTCAAG 61.301 60.000 2.24 0.00 0.00 3.02
341 342 0.962356 GGCCATCCACACACTCAAGG 60.962 60.000 0.00 0.00 0.00 3.61
342 343 1.589716 GCCATCCACACACTCAAGGC 61.590 60.000 0.00 0.00 0.00 4.35
343 344 0.250858 CCATCCACACACTCAAGGCA 60.251 55.000 0.00 0.00 0.00 4.75
344 345 0.877071 CATCCACACACTCAAGGCAC 59.123 55.000 0.00 0.00 0.00 5.01
345 346 0.603707 ATCCACACACTCAAGGCACG 60.604 55.000 0.00 0.00 0.00 5.34
346 347 2.253758 CCACACACTCAAGGCACGG 61.254 63.158 0.00 0.00 0.00 4.94
347 348 2.591715 ACACACTCAAGGCACGGC 60.592 61.111 0.00 0.00 0.00 5.68
348 349 2.591429 CACACTCAAGGCACGGCA 60.591 61.111 0.00 0.00 0.00 5.69
349 350 2.186160 CACACTCAAGGCACGGCAA 61.186 57.895 0.00 0.00 0.00 4.52
350 351 1.893808 ACACTCAAGGCACGGCAAG 60.894 57.895 0.00 0.00 0.00 4.01
351 352 2.281761 ACTCAAGGCACGGCAAGG 60.282 61.111 0.00 0.00 0.00 3.61
352 353 3.741476 CTCAAGGCACGGCAAGGC 61.741 66.667 0.00 0.00 0.00 4.35
363 364 4.043200 GCAAGGCCAGGTCGTTGC 62.043 66.667 18.97 18.97 46.07 4.17
364 365 2.594303 CAAGGCCAGGTCGTTGCA 60.594 61.111 5.01 0.00 0.00 4.08
390 391 7.169645 ACATTTGGTTTCTCATCAAAACAATCG 59.830 33.333 0.00 0.00 41.49 3.34
394 395 5.154222 GTTTCTCATCAAAACAATCGGGAC 58.846 41.667 0.00 0.00 36.76 4.46
397 398 1.476488 CATCAAAACAATCGGGACCCC 59.524 52.381 4.46 0.00 0.00 4.95
472 478 2.048444 ATACTCGAGTTAGGTGGCGA 57.952 50.000 25.44 1.81 0.00 5.54
474 480 2.181584 CTCGAGTTAGGTGGCGAGT 58.818 57.895 3.62 0.00 43.65 4.18
477 483 0.099082 CGAGTTAGGTGGCGAGTCTC 59.901 60.000 0.00 0.00 0.00 3.36
710 729 2.648724 CCGCGCGCATTGCTTTAG 60.649 61.111 32.61 11.04 43.27 1.85
717 736 1.142531 GCATTGCTTTAGCCAGCCC 59.857 57.895 0.16 0.00 39.25 5.19
1059 1078 3.116531 GGTAACGCACGGCTCCAC 61.117 66.667 0.00 0.00 0.00 4.02
1113 1155 4.572389 TGCTAGAGAAATTCGCTGATTTCC 59.428 41.667 9.49 8.77 43.70 3.13
1114 1156 4.572389 GCTAGAGAAATTCGCTGATTTCCA 59.428 41.667 9.49 4.27 43.70 3.53
1135 1177 2.496470 AGCGGTAGAGGTTCAAGTTAGG 59.504 50.000 0.00 0.00 0.00 2.69
1211 1253 1.485066 CTGCGGAGGTATGGGTTAGTT 59.515 52.381 0.00 0.00 0.00 2.24
1234 1276 1.154413 CGCATGGTTCGTTGCTGTC 60.154 57.895 0.00 0.00 36.71 3.51
1251 1293 2.046023 CAGGCGATTGGGCACAGA 60.046 61.111 0.00 0.00 45.36 3.41
1373 1416 7.994425 TTTCTATTTCAAGTTATGCCTGTCA 57.006 32.000 0.00 0.00 0.00 3.58
1439 1487 1.228245 AAAGCCGTGCTGTCCACAT 60.228 52.632 0.00 0.00 44.91 3.21
1547 1596 0.391395 AGCAGCAGTAGCAGAAGCAG 60.391 55.000 0.00 0.00 45.49 4.24
2022 2071 1.020437 GCATGCTAGTCTGCCCTTTC 58.980 55.000 11.37 0.00 32.15 2.62
2052 2101 4.754322 TCGCACAGCTTACATTCAATCTA 58.246 39.130 0.00 0.00 0.00 1.98
2116 2165 9.331282 AGAAAAGCTGTACATTACTTCCATATC 57.669 33.333 0.00 0.00 0.00 1.63
2123 2175 7.726216 TGTACATTACTTCCATATCAGTCCTG 58.274 38.462 0.00 0.00 0.00 3.86
2126 2178 6.613271 ACATTACTTCCATATCAGTCCTGTCT 59.387 38.462 0.00 0.00 0.00 3.41
2131 2183 8.964533 ACTTCCATATCAGTCCTGTCTATAAT 57.035 34.615 0.00 0.00 0.00 1.28
2152 2204 3.237268 TGGCTTACAATGTTTCCCTGT 57.763 42.857 0.00 0.00 0.00 4.00
2157 2209 5.236263 GGCTTACAATGTTTCCCTGTTTTTG 59.764 40.000 0.00 0.00 0.00 2.44
2158 2210 6.045955 GCTTACAATGTTTCCCTGTTTTTGA 58.954 36.000 0.00 0.00 0.00 2.69
2159 2211 6.705825 GCTTACAATGTTTCCCTGTTTTTGAT 59.294 34.615 0.00 0.00 0.00 2.57
2160 2212 7.307337 GCTTACAATGTTTCCCTGTTTTTGATG 60.307 37.037 0.00 0.00 0.00 3.07
2161 2213 4.815846 ACAATGTTTCCCTGTTTTTGATGC 59.184 37.500 0.00 0.00 0.00 3.91
2162 2214 4.961438 ATGTTTCCCTGTTTTTGATGCT 57.039 36.364 0.00 0.00 0.00 3.79
2163 2215 4.751767 TGTTTCCCTGTTTTTGATGCTT 57.248 36.364 0.00 0.00 0.00 3.91
2164 2216 4.440880 TGTTTCCCTGTTTTTGATGCTTG 58.559 39.130 0.00 0.00 0.00 4.01
2323 2375 2.038952 TGCTGATTCAGGCAGTACACTT 59.961 45.455 15.28 0.00 35.81 3.16
2518 2570 1.301874 CCTTCCCGTTGCGTTGGTA 60.302 57.895 0.00 0.00 0.00 3.25
2771 2823 6.183360 ACCATATCGAAATGACTTGTAGAGCT 60.183 38.462 0.00 0.00 0.00 4.09
2813 2865 9.547753 TCACTAATCTATGAGCTGTTTAATTCC 57.452 33.333 0.00 0.00 0.00 3.01
2932 2984 2.576191 AGTTCCTATTGCTGCCCTTGTA 59.424 45.455 0.00 0.00 0.00 2.41
2974 3026 2.375174 TCCCCAACTGCTGAACTACATT 59.625 45.455 0.00 0.00 0.00 2.71
3019 3071 1.314534 TTGCTGGCATCAACATCCCG 61.315 55.000 0.00 0.00 0.00 5.14
3150 3202 1.553248 TGTTTCATAGTAGCCGCCTGT 59.447 47.619 0.00 0.00 0.00 4.00
3171 3223 3.315470 GTCTTGTTTCAGGTTCTTGTCCC 59.685 47.826 0.00 0.00 0.00 4.46
3275 3327 1.004745 GGGATGGATATTGGCATCCGT 59.995 52.381 0.00 0.00 46.51 4.69
3417 3469 3.005554 CTGAAGTACTGGAGTTGCATGG 58.994 50.000 0.00 0.00 0.00 3.66
3436 3489 8.700722 TGCATGGTTATTACATTGAATTCAAC 57.299 30.769 22.71 8.42 38.86 3.18
3449 3506 4.136796 TGAATTCAACCTCTGTTCACCTG 58.863 43.478 5.45 0.00 30.42 4.00
3478 3535 7.883311 AGTTTCAGCTGAGTTTAGCCTTTTATA 59.117 33.333 17.43 0.00 44.76 0.98
3479 3536 7.849804 TTCAGCTGAGTTTAGCCTTTTATAG 57.150 36.000 17.43 0.00 44.76 1.31
3482 3539 6.258947 CAGCTGAGTTTAGCCTTTTATAGTCC 59.741 42.308 8.42 0.00 44.76 3.85
3608 3667 8.298729 AGAAAGAAAAGATGGAAGAGTTGTTT 57.701 30.769 0.00 0.00 0.00 2.83
3618 3677 4.704540 TGGAAGAGTTGTTTTTGAGCTGAA 59.295 37.500 0.00 0.00 0.00 3.02
3628 3687 5.123186 TGTTTTTGAGCTGAAAGACTTTCGA 59.877 36.000 20.27 10.48 42.55 3.71
3716 3775 6.036626 GCTTGGAGATTAGCTCTTAAGTTGTC 59.963 42.308 13.21 0.00 43.43 3.18
3753 3812 8.510243 AATTACTGCAACTATCACATCATTCA 57.490 30.769 0.00 0.00 0.00 2.57
3754 3813 8.687292 ATTACTGCAACTATCACATCATTCAT 57.313 30.769 0.00 0.00 0.00 2.57
3755 3814 6.615264 ACTGCAACTATCACATCATTCATC 57.385 37.500 0.00 0.00 0.00 2.92
3756 3815 5.530171 ACTGCAACTATCACATCATTCATCC 59.470 40.000 0.00 0.00 0.00 3.51
3757 3816 4.823442 TGCAACTATCACATCATTCATCCC 59.177 41.667 0.00 0.00 0.00 3.85
3758 3817 5.068636 GCAACTATCACATCATTCATCCCT 58.931 41.667 0.00 0.00 0.00 4.20
3759 3818 5.180868 GCAACTATCACATCATTCATCCCTC 59.819 44.000 0.00 0.00 0.00 4.30
3760 3819 6.531923 CAACTATCACATCATTCATCCCTCT 58.468 40.000 0.00 0.00 0.00 3.69
3761 3820 6.357579 ACTATCACATCATTCATCCCTCTC 57.642 41.667 0.00 0.00 0.00 3.20
3762 3821 3.740631 TCACATCATTCATCCCTCTCG 57.259 47.619 0.00 0.00 0.00 4.04
3763 3822 2.366590 TCACATCATTCATCCCTCTCGG 59.633 50.000 0.00 0.00 0.00 4.63
3765 3824 3.041211 ACATCATTCATCCCTCTCGGAA 58.959 45.455 0.00 0.00 46.47 4.30
3766 3825 3.455910 ACATCATTCATCCCTCTCGGAAA 59.544 43.478 0.00 0.00 46.47 3.13
3767 3826 4.080356 ACATCATTCATCCCTCTCGGAAAA 60.080 41.667 0.00 0.00 46.47 2.29
3768 3827 4.568072 TCATTCATCCCTCTCGGAAAAA 57.432 40.909 0.00 0.00 46.47 1.94
3813 3872 7.459795 TTTTTGGCAGTGTATTGTATCATGA 57.540 32.000 0.00 0.00 0.00 3.07
3814 3873 6.435430 TTTGGCAGTGTATTGTATCATGAC 57.565 37.500 0.00 0.00 0.00 3.06
3815 3874 5.357742 TGGCAGTGTATTGTATCATGACT 57.642 39.130 0.00 0.00 0.00 3.41
3816 3875 6.478512 TGGCAGTGTATTGTATCATGACTA 57.521 37.500 0.00 0.00 0.00 2.59
3817 3876 7.066307 TGGCAGTGTATTGTATCATGACTAT 57.934 36.000 0.00 0.00 0.00 2.12
3818 3877 6.930722 TGGCAGTGTATTGTATCATGACTATG 59.069 38.462 0.00 0.00 35.57 2.23
3819 3878 6.931281 GGCAGTGTATTGTATCATGACTATGT 59.069 38.462 0.00 0.00 35.73 2.29
3820 3879 8.088365 GGCAGTGTATTGTATCATGACTATGTA 58.912 37.037 0.00 0.00 35.73 2.29
3821 3880 9.133627 GCAGTGTATTGTATCATGACTATGTAG 57.866 37.037 0.00 0.00 35.73 2.74
3822 3881 9.133627 CAGTGTATTGTATCATGACTATGTAGC 57.866 37.037 0.00 0.00 35.73 3.58
3823 3882 8.860088 AGTGTATTGTATCATGACTATGTAGCA 58.140 33.333 0.00 0.00 35.73 3.49
3824 3883 8.916654 GTGTATTGTATCATGACTATGTAGCAC 58.083 37.037 0.00 0.00 35.73 4.40
3825 3884 8.637986 TGTATTGTATCATGACTATGTAGCACA 58.362 33.333 0.00 0.00 35.73 4.57
3826 3885 7.953158 ATTGTATCATGACTATGTAGCACAC 57.047 36.000 0.00 0.00 35.73 3.82
3827 3886 6.463995 TGTATCATGACTATGTAGCACACA 57.536 37.500 0.00 0.00 42.69 3.72
3829 3888 7.500141 TGTATCATGACTATGTAGCACACATT 58.500 34.615 8.99 0.00 46.01 2.71
3830 3889 7.986889 TGTATCATGACTATGTAGCACACATTT 59.013 33.333 8.99 0.00 46.01 2.32
3831 3890 6.667007 TCATGACTATGTAGCACACATTTG 57.333 37.500 8.99 6.11 46.01 2.32
3832 3891 5.585844 TCATGACTATGTAGCACACATTTGG 59.414 40.000 8.99 4.14 46.01 3.28
3833 3892 5.159273 TGACTATGTAGCACACATTTGGA 57.841 39.130 8.99 0.00 46.01 3.53
3834 3893 5.744171 TGACTATGTAGCACACATTTGGAT 58.256 37.500 8.99 0.00 46.01 3.41
3835 3894 6.179756 TGACTATGTAGCACACATTTGGATT 58.820 36.000 8.99 0.00 46.01 3.01
3836 3895 6.093909 TGACTATGTAGCACACATTTGGATTG 59.906 38.462 8.99 0.00 46.01 2.67
3837 3896 5.945784 ACTATGTAGCACACATTTGGATTGT 59.054 36.000 8.99 0.00 46.01 2.71
3838 3897 7.109501 ACTATGTAGCACACATTTGGATTGTA 58.890 34.615 8.99 0.00 46.01 2.41
3839 3898 6.832520 ATGTAGCACACATTTGGATTGTAA 57.167 33.333 0.00 0.00 46.01 2.41
3840 3899 6.252967 TGTAGCACACATTTGGATTGTAAG 57.747 37.500 0.00 0.00 30.04 2.34
3841 3900 4.178545 AGCACACATTTGGATTGTAAGC 57.821 40.909 0.00 0.00 0.00 3.09
3842 3901 3.828451 AGCACACATTTGGATTGTAAGCT 59.172 39.130 0.00 0.00 33.91 3.74
3843 3902 4.281688 AGCACACATTTGGATTGTAAGCTT 59.718 37.500 3.48 3.48 34.62 3.74
3844 3903 4.990426 GCACACATTTGGATTGTAAGCTTT 59.010 37.500 3.20 0.00 0.00 3.51
3845 3904 5.466393 GCACACATTTGGATTGTAAGCTTTT 59.534 36.000 3.20 0.00 0.00 2.27
3846 3905 6.346838 GCACACATTTGGATTGTAAGCTTTTC 60.347 38.462 3.20 0.00 0.00 2.29
3847 3906 6.925165 CACACATTTGGATTGTAAGCTTTTCT 59.075 34.615 3.20 0.00 0.00 2.52
3848 3907 8.081633 CACACATTTGGATTGTAAGCTTTTCTA 58.918 33.333 3.20 0.00 0.00 2.10
3849 3908 8.806146 ACACATTTGGATTGTAAGCTTTTCTAT 58.194 29.630 3.20 1.09 0.00 1.98
3850 3909 9.079833 CACATTTGGATTGTAAGCTTTTCTATG 57.920 33.333 3.20 5.94 0.00 2.23
3851 3910 8.806146 ACATTTGGATTGTAAGCTTTTCTATGT 58.194 29.630 3.20 6.45 0.00 2.29
3854 3913 9.515226 TTTGGATTGTAAGCTTTTCTATGTAGT 57.485 29.630 3.20 0.00 0.00 2.73
3856 3915 9.595823 TGGATTGTAAGCTTTTCTATGTAGTAC 57.404 33.333 3.20 0.00 0.00 2.73
3857 3916 9.595823 GGATTGTAAGCTTTTCTATGTAGTACA 57.404 33.333 3.20 5.24 0.00 2.90
3859 3918 9.938280 ATTGTAAGCTTTTCTATGTAGTACACA 57.062 29.630 3.20 0.00 42.69 3.72
3860 3919 8.752766 TGTAAGCTTTTCTATGTAGTACACAC 57.247 34.615 3.20 0.00 40.86 3.82
3861 3920 6.946229 AAGCTTTTCTATGTAGTACACACG 57.054 37.500 4.80 0.00 40.86 4.49
3862 3921 6.022163 AGCTTTTCTATGTAGTACACACGT 57.978 37.500 4.80 0.00 40.86 4.49
3863 3922 5.862323 AGCTTTTCTATGTAGTACACACGTG 59.138 40.000 15.48 15.48 40.86 4.49
3864 3923 5.632347 GCTTTTCTATGTAGTACACACGTGT 59.368 40.000 17.22 17.22 46.87 4.49
3865 3924 6.803320 GCTTTTCTATGTAGTACACACGTGTA 59.197 38.462 22.90 3.45 44.42 2.90
3866 3925 7.487189 GCTTTTCTATGTAGTACACACGTGTAT 59.513 37.037 22.90 13.95 46.36 2.29
3867 3926 9.350357 CTTTTCTATGTAGTACACACGTGTATT 57.650 33.333 22.90 13.91 46.36 1.89
3870 3929 9.940166 TTCTATGTAGTACACACGTGTATTATG 57.060 33.333 22.90 11.35 46.36 1.90
3871 3930 9.328845 TCTATGTAGTACACACGTGTATTATGA 57.671 33.333 22.90 2.45 46.36 2.15
3874 3933 8.217131 TGTAGTACACACGTGTATTATGATCT 57.783 34.615 22.90 13.50 46.36 2.75
3875 3934 8.680001 TGTAGTACACACGTGTATTATGATCTT 58.320 33.333 22.90 1.82 46.36 2.40
3876 3935 9.512435 GTAGTACACACGTGTATTATGATCTTT 57.488 33.333 22.90 0.45 46.36 2.52
3877 3936 8.997621 AGTACACACGTGTATTATGATCTTTT 57.002 30.769 22.90 0.00 46.36 2.27
3878 3937 8.869897 AGTACACACGTGTATTATGATCTTTTG 58.130 33.333 22.90 6.18 46.36 2.44
3879 3938 7.667043 ACACACGTGTATTATGATCTTTTGT 57.333 32.000 22.90 6.87 42.90 2.83
3880 3939 8.094798 ACACACGTGTATTATGATCTTTTGTT 57.905 30.769 22.90 0.00 42.90 2.83
3881 3940 9.210329 ACACACGTGTATTATGATCTTTTGTTA 57.790 29.630 22.90 0.00 42.90 2.41
3882 3941 9.689075 CACACGTGTATTATGATCTTTTGTTAG 57.311 33.333 22.90 0.00 0.00 2.34
3883 3942 9.431887 ACACGTGTATTATGATCTTTTGTTAGT 57.568 29.630 21.98 0.00 0.00 2.24
3884 3943 9.689075 CACGTGTATTATGATCTTTTGTTAGTG 57.311 33.333 7.58 0.00 0.00 2.74
3885 3944 9.431887 ACGTGTATTATGATCTTTTGTTAGTGT 57.568 29.630 0.00 0.00 0.00 3.55
3886 3945 9.689075 CGTGTATTATGATCTTTTGTTAGTGTG 57.311 33.333 0.00 0.00 0.00 3.82
3894 3953 8.854979 TGATCTTTTGTTAGTGTGTTCAATTG 57.145 30.769 0.00 0.00 0.00 2.32
3895 3954 8.681806 TGATCTTTTGTTAGTGTGTTCAATTGA 58.318 29.630 3.38 3.38 0.00 2.57
3896 3955 9.683069 GATCTTTTGTTAGTGTGTTCAATTGAT 57.317 29.630 9.40 0.00 0.00 2.57
3897 3956 8.854979 TCTTTTGTTAGTGTGTTCAATTGATG 57.145 30.769 9.40 0.00 0.00 3.07
3898 3957 8.465999 TCTTTTGTTAGTGTGTTCAATTGATGT 58.534 29.630 9.40 0.00 0.00 3.06
3899 3958 9.729023 CTTTTGTTAGTGTGTTCAATTGATGTA 57.271 29.630 9.40 0.00 0.00 2.29
3901 3960 9.676195 TTTGTTAGTGTGTTCAATTGATGTATG 57.324 29.630 9.40 0.00 0.00 2.39
3902 3961 8.389779 TGTTAGTGTGTTCAATTGATGTATGT 57.610 30.769 9.40 0.00 0.00 2.29
3903 3962 8.845227 TGTTAGTGTGTTCAATTGATGTATGTT 58.155 29.630 9.40 0.00 0.00 2.71
3904 3963 9.677567 GTTAGTGTGTTCAATTGATGTATGTTT 57.322 29.630 9.40 0.00 0.00 2.83
3906 3965 8.578308 AGTGTGTTCAATTGATGTATGTTTTG 57.422 30.769 9.40 0.00 0.00 2.44
3907 3966 8.412456 AGTGTGTTCAATTGATGTATGTTTTGA 58.588 29.630 9.40 0.00 0.00 2.69
3908 3967 8.693504 GTGTGTTCAATTGATGTATGTTTTGAG 58.306 33.333 9.40 0.00 0.00 3.02
3909 3968 8.628280 TGTGTTCAATTGATGTATGTTTTGAGA 58.372 29.630 9.40 0.00 0.00 3.27
3910 3969 9.630098 GTGTTCAATTGATGTATGTTTTGAGAT 57.370 29.630 9.40 0.00 0.00 2.75
3918 3977 7.751732 TGATGTATGTTTTGAGATAACTGTGC 58.248 34.615 0.00 0.00 0.00 4.57
3919 3978 7.390162 TGATGTATGTTTTGAGATAACTGTGCA 59.610 33.333 0.00 0.00 0.00 4.57
3920 3979 7.132694 TGTATGTTTTGAGATAACTGTGCAG 57.867 36.000 0.00 0.00 0.00 4.41
3921 3980 6.934083 TGTATGTTTTGAGATAACTGTGCAGA 59.066 34.615 6.17 0.00 0.00 4.26
3922 3981 6.882610 ATGTTTTGAGATAACTGTGCAGAA 57.117 33.333 6.17 0.00 0.00 3.02
3923 3982 6.691754 TGTTTTGAGATAACTGTGCAGAAA 57.308 33.333 6.17 0.00 0.00 2.52
3924 3983 6.494842 TGTTTTGAGATAACTGTGCAGAAAC 58.505 36.000 6.17 4.51 0.00 2.78
3925 3984 4.990543 TTGAGATAACTGTGCAGAAACG 57.009 40.909 6.17 0.00 0.00 3.60
3926 3985 3.990092 TGAGATAACTGTGCAGAAACGT 58.010 40.909 6.17 0.00 0.00 3.99
3927 3986 4.377021 TGAGATAACTGTGCAGAAACGTT 58.623 39.130 6.17 0.00 0.00 3.99
3928 3987 5.534407 TGAGATAACTGTGCAGAAACGTTA 58.466 37.500 0.00 0.00 0.00 3.18
3929 3988 5.986741 TGAGATAACTGTGCAGAAACGTTAA 59.013 36.000 0.00 0.00 0.00 2.01
3930 3989 6.480651 TGAGATAACTGTGCAGAAACGTTAAA 59.519 34.615 0.00 0.00 0.00 1.52
3931 3990 7.011576 TGAGATAACTGTGCAGAAACGTTAAAA 59.988 33.333 0.00 0.00 0.00 1.52
3932 3991 7.130269 AGATAACTGTGCAGAAACGTTAAAAC 58.870 34.615 0.00 0.00 0.00 2.43
3933 3992 4.688511 ACTGTGCAGAAACGTTAAAACA 57.311 36.364 0.00 1.79 0.00 2.83
3934 3993 5.049398 ACTGTGCAGAAACGTTAAAACAA 57.951 34.783 0.00 0.00 0.00 2.83
3935 3994 4.854839 ACTGTGCAGAAACGTTAAAACAAC 59.145 37.500 0.00 0.00 0.00 3.32
3936 3995 5.049398 TGTGCAGAAACGTTAAAACAACT 57.951 34.783 0.00 0.00 0.00 3.16
3937 3996 5.090083 TGTGCAGAAACGTTAAAACAACTC 58.910 37.500 0.00 0.00 0.00 3.01
3938 3997 5.090083 GTGCAGAAACGTTAAAACAACTCA 58.910 37.500 0.00 0.00 0.00 3.41
3939 3998 5.741982 GTGCAGAAACGTTAAAACAACTCAT 59.258 36.000 0.00 0.00 0.00 2.90
3940 3999 5.741510 TGCAGAAACGTTAAAACAACTCATG 59.258 36.000 0.00 0.00 0.00 3.07
3941 4000 5.331532 GCAGAAACGTTAAAACAACTCATGC 60.332 40.000 0.00 1.75 0.00 4.06
3942 4001 5.971202 CAGAAACGTTAAAACAACTCATGCT 59.029 36.000 0.00 0.00 0.00 3.79
3943 4002 7.129622 CAGAAACGTTAAAACAACTCATGCTA 58.870 34.615 0.00 0.00 0.00 3.49
3944 4003 7.642194 CAGAAACGTTAAAACAACTCATGCTAA 59.358 33.333 0.00 0.00 0.00 3.09
3945 4004 8.185505 AGAAACGTTAAAACAACTCATGCTAAA 58.814 29.630 0.00 0.00 0.00 1.85
3946 4005 8.690680 AAACGTTAAAACAACTCATGCTAAAA 57.309 26.923 0.00 0.00 0.00 1.52
3947 4006 8.690680 AACGTTAAAACAACTCATGCTAAAAA 57.309 26.923 0.00 0.00 0.00 1.94
3967 4026 6.604735 AAAAAGCCTCTATAGTAATGCACG 57.395 37.500 0.00 0.00 0.00 5.34
3968 4027 5.531122 AAAGCCTCTATAGTAATGCACGA 57.469 39.130 0.00 0.00 0.00 4.35
3969 4028 4.775058 AGCCTCTATAGTAATGCACGAG 57.225 45.455 0.00 0.00 0.00 4.18
3970 4029 3.057174 AGCCTCTATAGTAATGCACGAGC 60.057 47.826 0.00 0.00 42.57 5.03
3982 4041 2.634982 GCACGAGCATTTGAATTCCA 57.365 45.000 2.27 0.00 41.58 3.53
3983 4042 3.155093 GCACGAGCATTTGAATTCCAT 57.845 42.857 2.27 0.00 41.58 3.41
3984 4043 3.514645 GCACGAGCATTTGAATTCCATT 58.485 40.909 2.27 0.00 41.58 3.16
3985 4044 3.305094 GCACGAGCATTTGAATTCCATTG 59.695 43.478 2.27 0.12 41.58 2.82
3986 4045 4.487948 CACGAGCATTTGAATTCCATTGT 58.512 39.130 2.27 0.00 0.00 2.71
3987 4046 5.639757 CACGAGCATTTGAATTCCATTGTA 58.360 37.500 2.27 0.00 0.00 2.41
3988 4047 5.512788 CACGAGCATTTGAATTCCATTGTAC 59.487 40.000 2.27 0.00 0.00 2.90
3989 4048 5.036737 CGAGCATTTGAATTCCATTGTACC 58.963 41.667 2.27 0.00 0.00 3.34
3990 4049 5.392919 CGAGCATTTGAATTCCATTGTACCA 60.393 40.000 2.27 0.00 0.00 3.25
3991 4050 6.357579 AGCATTTGAATTCCATTGTACCAA 57.642 33.333 2.27 0.00 0.00 3.67
3992 4051 6.767456 AGCATTTGAATTCCATTGTACCAAA 58.233 32.000 2.27 0.00 0.00 3.28
3993 4052 7.222872 AGCATTTGAATTCCATTGTACCAAAA 58.777 30.769 2.27 0.00 0.00 2.44
3994 4053 7.718753 AGCATTTGAATTCCATTGTACCAAAAA 59.281 29.630 2.27 0.00 0.00 1.94
3995 4054 8.016801 GCATTTGAATTCCATTGTACCAAAAAG 58.983 33.333 2.27 0.00 0.00 2.27
3996 4055 9.270640 CATTTGAATTCCATTGTACCAAAAAGA 57.729 29.630 2.27 0.00 0.00 2.52
3997 4056 9.844257 ATTTGAATTCCATTGTACCAAAAAGAA 57.156 25.926 2.27 0.00 0.00 2.52
3998 4057 9.672673 TTTGAATTCCATTGTACCAAAAAGAAA 57.327 25.926 2.27 0.00 0.00 2.52
3999 4058 8.885494 TGAATTCCATTGTACCAAAAAGAAAG 57.115 30.769 2.27 0.00 0.00 2.62
4000 4059 8.700051 TGAATTCCATTGTACCAAAAAGAAAGA 58.300 29.630 2.27 0.00 0.00 2.52
4001 4060 9.710900 GAATTCCATTGTACCAAAAAGAAAGAT 57.289 29.630 0.00 0.00 0.00 2.40
4002 4061 9.710900 AATTCCATTGTACCAAAAAGAAAGATC 57.289 29.630 0.00 0.00 0.00 2.75
4003 4062 8.477419 TTCCATTGTACCAAAAAGAAAGATCT 57.523 30.769 0.00 0.00 37.57 2.75
4005 4064 8.576442 TCCATTGTACCAAAAAGAAAGATCTTC 58.424 33.333 8.78 2.74 45.19 2.87
4006 4065 8.579863 CCATTGTACCAAAAAGAAAGATCTTCT 58.420 33.333 8.78 5.09 45.19 2.85
4013 4072 9.520515 ACCAAAAAGAAAGATCTTCTATAGCAA 57.479 29.630 8.78 0.00 45.19 3.91
4017 4076 8.743085 AAAGAAAGATCTTCTATAGCAATGCA 57.257 30.769 8.78 0.00 45.19 3.96
4018 4077 8.921353 AAGAAAGATCTTCTATAGCAATGCAT 57.079 30.769 8.78 0.00 42.26 3.96
4019 4078 8.325421 AGAAAGATCTTCTATAGCAATGCATG 57.675 34.615 8.78 0.00 29.15 4.06
4020 4079 8.155510 AGAAAGATCTTCTATAGCAATGCATGA 58.844 33.333 8.78 0.00 29.15 3.07
4021 4080 7.908827 AAGATCTTCTATAGCAATGCATGAG 57.091 36.000 8.35 0.70 0.00 2.90
4022 4081 5.875910 AGATCTTCTATAGCAATGCATGAGC 59.124 40.000 8.35 14.68 42.57 4.26
4023 4082 4.321718 TCTTCTATAGCAATGCATGAGCC 58.678 43.478 17.84 3.99 41.13 4.70
4024 4083 4.041321 TCTTCTATAGCAATGCATGAGCCT 59.959 41.667 17.84 10.27 41.13 4.58
4025 4084 4.362470 TCTATAGCAATGCATGAGCCTT 57.638 40.909 17.84 10.12 41.13 4.35
4026 4085 4.722220 TCTATAGCAATGCATGAGCCTTT 58.278 39.130 17.84 8.12 41.13 3.11
4027 4086 5.868454 TCTATAGCAATGCATGAGCCTTTA 58.132 37.500 17.84 7.32 41.13 1.85
4028 4087 6.298361 TCTATAGCAATGCATGAGCCTTTAA 58.702 36.000 17.84 2.64 41.13 1.52
4029 4088 3.515330 AGCAATGCATGAGCCTTTAAC 57.485 42.857 17.84 0.00 41.13 2.01
4030 4089 3.094572 AGCAATGCATGAGCCTTTAACT 58.905 40.909 17.84 0.00 41.13 2.24
4031 4090 3.512724 AGCAATGCATGAGCCTTTAACTT 59.487 39.130 17.84 0.00 41.13 2.66
4032 4091 3.861689 GCAATGCATGAGCCTTTAACTTC 59.138 43.478 12.14 0.00 41.13 3.01
4033 4092 4.381292 GCAATGCATGAGCCTTTAACTTCT 60.381 41.667 12.14 0.00 41.13 2.85
4034 4093 5.717119 CAATGCATGAGCCTTTAACTTCTT 58.283 37.500 0.00 0.00 41.13 2.52
4035 4094 5.990120 ATGCATGAGCCTTTAACTTCTTT 57.010 34.783 0.00 0.00 41.13 2.52
4036 4095 5.789643 TGCATGAGCCTTTAACTTCTTTT 57.210 34.783 0.00 0.00 41.13 2.27
4037 4096 6.892658 TGCATGAGCCTTTAACTTCTTTTA 57.107 33.333 0.00 0.00 41.13 1.52
4038 4097 7.466746 TGCATGAGCCTTTAACTTCTTTTAT 57.533 32.000 0.00 0.00 41.13 1.40
4039 4098 7.315142 TGCATGAGCCTTTAACTTCTTTTATG 58.685 34.615 0.00 0.00 41.13 1.90
4040 4099 7.039784 TGCATGAGCCTTTAACTTCTTTTATGT 60.040 33.333 0.00 0.00 41.13 2.29
4041 4100 7.814587 GCATGAGCCTTTAACTTCTTTTATGTT 59.185 33.333 0.00 0.00 33.58 2.71
4042 4101 9.696917 CATGAGCCTTTAACTTCTTTTATGTTT 57.303 29.630 0.00 0.00 0.00 2.83
4043 4102 9.696917 ATGAGCCTTTAACTTCTTTTATGTTTG 57.303 29.630 0.00 0.00 0.00 2.93
4044 4103 7.651704 TGAGCCTTTAACTTCTTTTATGTTTGC 59.348 33.333 0.00 0.00 0.00 3.68
4045 4104 6.640907 AGCCTTTAACTTCTTTTATGTTTGCG 59.359 34.615 0.00 0.00 0.00 4.85
4046 4105 6.639279 GCCTTTAACTTCTTTTATGTTTGCGA 59.361 34.615 0.00 0.00 0.00 5.10
4047 4106 7.328493 GCCTTTAACTTCTTTTATGTTTGCGAT 59.672 33.333 0.00 0.00 0.00 4.58
4048 4107 8.638565 CCTTTAACTTCTTTTATGTTTGCGATG 58.361 33.333 0.00 0.00 0.00 3.84
4049 4108 9.393249 CTTTAACTTCTTTTATGTTTGCGATGA 57.607 29.630 0.00 0.00 0.00 2.92
4050 4109 9.737427 TTTAACTTCTTTTATGTTTGCGATGAA 57.263 25.926 0.00 0.00 0.00 2.57
4051 4110 7.858052 AACTTCTTTTATGTTTGCGATGAAG 57.142 32.000 0.00 0.00 35.78 3.02
4052 4111 5.858581 ACTTCTTTTATGTTTGCGATGAAGC 59.141 36.000 0.00 0.00 33.78 3.86
4053 4112 5.369685 TCTTTTATGTTTGCGATGAAGCA 57.630 34.783 0.00 0.00 46.54 3.91
4062 4121 3.476295 TGCGATGAAGCATTTGACTTC 57.524 42.857 0.00 0.00 42.92 3.01
4063 4122 2.162208 TGCGATGAAGCATTTGACTTCC 59.838 45.455 0.00 0.00 42.92 3.46
4064 4123 2.162208 GCGATGAAGCATTTGACTTCCA 59.838 45.455 0.00 0.00 42.35 3.53
4065 4124 3.181493 GCGATGAAGCATTTGACTTCCAT 60.181 43.478 0.00 0.00 42.35 3.41
4066 4125 4.676196 GCGATGAAGCATTTGACTTCCATT 60.676 41.667 0.00 0.00 42.35 3.16
4067 4126 5.449041 GCGATGAAGCATTTGACTTCCATTA 60.449 40.000 0.00 0.00 42.35 1.90
4068 4127 6.732154 CGATGAAGCATTTGACTTCCATTAT 58.268 36.000 0.00 0.00 42.35 1.28
4069 4128 7.520453 GCGATGAAGCATTTGACTTCCATTATA 60.520 37.037 0.00 0.00 42.35 0.98
4070 4129 8.509690 CGATGAAGCATTTGACTTCCATTATAT 58.490 33.333 0.00 0.00 42.35 0.86
4077 4136 9.846248 GCATTTGACTTCCATTATATTATGTCC 57.154 33.333 1.35 0.00 0.00 4.02
4082 4141 9.739276 TGACTTCCATTATATTATGTCCATTCC 57.261 33.333 1.35 0.00 0.00 3.01
4083 4142 9.965902 GACTTCCATTATATTATGTCCATTCCT 57.034 33.333 1.35 0.00 0.00 3.36
4099 4158 9.573166 TGTCCATTCCTAAATATAAGACATTGG 57.427 33.333 0.00 0.00 0.00 3.16
4100 4159 9.014297 GTCCATTCCTAAATATAAGACATTGGG 57.986 37.037 0.00 0.00 0.00 4.12
4101 4160 8.170061 TCCATTCCTAAATATAAGACATTGGGG 58.830 37.037 0.00 0.00 0.00 4.96
4102 4161 7.093771 CCATTCCTAAATATAAGACATTGGGGC 60.094 40.741 0.00 0.00 0.00 5.80
4103 4162 6.523035 TCCTAAATATAAGACATTGGGGCA 57.477 37.500 0.00 0.00 0.00 5.36
4104 4163 6.542821 TCCTAAATATAAGACATTGGGGCAG 58.457 40.000 0.00 0.00 0.00 4.85
4105 4164 5.183904 CCTAAATATAAGACATTGGGGCAGC 59.816 44.000 0.00 0.00 0.00 5.25
4106 4165 4.459852 AATATAAGACATTGGGGCAGCT 57.540 40.909 0.00 0.00 0.00 4.24
4107 4166 2.834638 ATAAGACATTGGGGCAGCTT 57.165 45.000 0.00 0.00 0.00 3.74
4108 4167 3.951563 ATAAGACATTGGGGCAGCTTA 57.048 42.857 0.00 0.00 0.00 3.09
4109 4168 2.603075 AAGACATTGGGGCAGCTTAA 57.397 45.000 0.00 0.00 0.00 1.85
4110 4169 2.834638 AGACATTGGGGCAGCTTAAT 57.165 45.000 0.00 0.00 0.00 1.40
4111 4170 3.105959 AGACATTGGGGCAGCTTAATT 57.894 42.857 0.00 0.00 0.00 1.40
4112 4171 3.444029 AGACATTGGGGCAGCTTAATTT 58.556 40.909 0.00 0.00 0.00 1.82
4113 4172 4.609301 AGACATTGGGGCAGCTTAATTTA 58.391 39.130 0.00 0.00 0.00 1.40
4114 4173 5.022787 AGACATTGGGGCAGCTTAATTTAA 58.977 37.500 0.00 0.00 0.00 1.52
4115 4174 5.127682 AGACATTGGGGCAGCTTAATTTAAG 59.872 40.000 11.14 11.14 38.80 1.85
4127 4186 5.405935 CTTAATTTAAGCTGCCCCAACTT 57.594 39.130 3.33 0.00 0.00 2.66
4128 4187 3.961480 AATTTAAGCTGCCCCAACTTC 57.039 42.857 0.00 0.00 0.00 3.01
4129 4188 2.675658 TTTAAGCTGCCCCAACTTCT 57.324 45.000 0.00 0.00 0.00 2.85
4130 4189 2.675658 TTAAGCTGCCCCAACTTCTT 57.324 45.000 0.00 0.00 0.00 2.52
4131 4190 3.799432 TTAAGCTGCCCCAACTTCTTA 57.201 42.857 0.00 0.00 0.00 2.10
4132 4191 2.907458 AAGCTGCCCCAACTTCTTAT 57.093 45.000 0.00 0.00 0.00 1.73
4133 4192 5.444744 TTAAGCTGCCCCAACTTCTTATA 57.555 39.130 0.00 0.00 0.00 0.98
4134 4193 4.526438 AAGCTGCCCCAACTTCTTATAT 57.474 40.909 0.00 0.00 0.00 0.86
4135 4194 4.526438 AGCTGCCCCAACTTCTTATATT 57.474 40.909 0.00 0.00 0.00 1.28
4136 4195 4.871822 AGCTGCCCCAACTTCTTATATTT 58.128 39.130 0.00 0.00 0.00 1.40
4137 4196 5.272402 AGCTGCCCCAACTTCTTATATTTT 58.728 37.500 0.00 0.00 0.00 1.82
4138 4197 5.127682 AGCTGCCCCAACTTCTTATATTTTG 59.872 40.000 0.00 0.00 0.00 2.44
4139 4198 5.682212 GCTGCCCCAACTTCTTATATTTTGG 60.682 44.000 0.00 0.00 37.13 3.28
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 2.958576 GGGTGATTCCGCGCAAAA 59.041 55.556 8.75 0.00 37.00 2.44
9 10 1.755384 GATCCCCTCGGGTGATTCC 59.245 63.158 0.55 0.00 44.74 3.01
10 11 1.755384 GGATCCCCTCGGGTGATTC 59.245 63.158 0.00 0.00 44.74 2.52
11 12 2.140792 CGGATCCCCTCGGGTGATT 61.141 63.158 6.06 0.00 44.74 2.57
12 13 2.524394 CGGATCCCCTCGGGTGAT 60.524 66.667 6.06 3.70 44.74 3.06
30 31 1.284785 TCCTAATTCCAGGCAAGGGTG 59.715 52.381 0.00 0.00 35.49 4.61
31 32 1.566231 CTCCTAATTCCAGGCAAGGGT 59.434 52.381 0.00 0.00 35.49 4.34
32 33 1.566231 ACTCCTAATTCCAGGCAAGGG 59.434 52.381 0.00 0.00 35.49 3.95
33 34 3.372440 AACTCCTAATTCCAGGCAAGG 57.628 47.619 0.00 0.00 35.49 3.61
34 35 5.237344 CGATTAACTCCTAATTCCAGGCAAG 59.763 44.000 0.00 0.00 35.49 4.01
35 36 5.104693 TCGATTAACTCCTAATTCCAGGCAA 60.105 40.000 0.00 0.00 35.49 4.52
36 37 4.407621 TCGATTAACTCCTAATTCCAGGCA 59.592 41.667 0.00 0.00 35.49 4.75
37 38 4.957296 TCGATTAACTCCTAATTCCAGGC 58.043 43.478 0.00 0.00 35.49 4.85
38 39 5.934625 CCATCGATTAACTCCTAATTCCAGG 59.065 44.000 0.00 0.00 37.00 4.45
39 40 6.759272 TCCATCGATTAACTCCTAATTCCAG 58.241 40.000 0.00 0.00 29.89 3.86
40 41 6.740944 TCCATCGATTAACTCCTAATTCCA 57.259 37.500 0.00 0.00 29.89 3.53
41 42 7.878127 TCAATCCATCGATTAACTCCTAATTCC 59.122 37.037 0.00 0.00 36.54 3.01
42 43 8.833231 TCAATCCATCGATTAACTCCTAATTC 57.167 34.615 0.00 0.00 36.54 2.17
43 44 9.442047 GATCAATCCATCGATTAACTCCTAATT 57.558 33.333 0.00 0.00 36.54 1.40
58 59 2.483106 CACATCTGGCGATCAATCCATC 59.517 50.000 0.00 0.00 0.00 3.51
59 60 2.501261 CACATCTGGCGATCAATCCAT 58.499 47.619 0.00 0.00 0.00 3.41
60 61 1.475571 CCACATCTGGCGATCAATCCA 60.476 52.381 0.00 0.00 0.00 3.41
61 62 1.202687 TCCACATCTGGCGATCAATCC 60.203 52.381 0.00 0.00 37.49 3.01
62 63 2.245159 TCCACATCTGGCGATCAATC 57.755 50.000 0.00 0.00 37.49 2.67
63 64 2.105306 TCATCCACATCTGGCGATCAAT 59.895 45.455 0.00 0.00 37.49 2.57
64 65 1.485895 TCATCCACATCTGGCGATCAA 59.514 47.619 0.00 0.00 37.49 2.57
65 66 1.122227 TCATCCACATCTGGCGATCA 58.878 50.000 0.00 0.00 37.49 2.92
66 67 2.245159 TTCATCCACATCTGGCGATC 57.755 50.000 0.00 0.00 37.49 3.69
67 68 2.715749 TTTCATCCACATCTGGCGAT 57.284 45.000 0.00 0.00 37.49 4.58
68 69 2.488204 TTTTCATCCACATCTGGCGA 57.512 45.000 0.00 0.00 37.49 5.54
69 70 3.788333 AATTTTCATCCACATCTGGCG 57.212 42.857 0.00 0.00 37.49 5.69
70 71 4.632688 CCAAAATTTTCATCCACATCTGGC 59.367 41.667 0.00 0.00 37.49 4.85
71 72 5.180271 CCCAAAATTTTCATCCACATCTGG 58.820 41.667 0.00 0.00 39.23 3.86
72 73 5.046448 TCCCCAAAATTTTCATCCACATCTG 60.046 40.000 0.00 0.00 0.00 2.90
73 74 5.092968 TCCCCAAAATTTTCATCCACATCT 58.907 37.500 0.00 0.00 0.00 2.90
74 75 5.419239 TCCCCAAAATTTTCATCCACATC 57.581 39.130 0.00 0.00 0.00 3.06
75 76 5.839517 TTCCCCAAAATTTTCATCCACAT 57.160 34.783 0.00 0.00 0.00 3.21
76 77 5.104360 TGTTTCCCCAAAATTTTCATCCACA 60.104 36.000 0.00 0.00 0.00 4.17
77 78 5.372373 TGTTTCCCCAAAATTTTCATCCAC 58.628 37.500 0.00 0.00 0.00 4.02
78 79 5.367937 TCTGTTTCCCCAAAATTTTCATCCA 59.632 36.000 0.00 0.00 0.00 3.41
79 80 5.863965 TCTGTTTCCCCAAAATTTTCATCC 58.136 37.500 0.00 0.00 0.00 3.51
80 81 5.934043 CCTCTGTTTCCCCAAAATTTTCATC 59.066 40.000 0.00 0.00 0.00 2.92
81 82 5.606329 TCCTCTGTTTCCCCAAAATTTTCAT 59.394 36.000 0.00 0.00 0.00 2.57
82 83 4.965532 TCCTCTGTTTCCCCAAAATTTTCA 59.034 37.500 0.00 0.00 0.00 2.69
83 84 5.545063 TCCTCTGTTTCCCCAAAATTTTC 57.455 39.130 0.00 0.00 0.00 2.29
84 85 5.687441 GCTTCCTCTGTTTCCCCAAAATTTT 60.687 40.000 0.00 0.00 0.00 1.82
85 86 4.202357 GCTTCCTCTGTTTCCCCAAAATTT 60.202 41.667 0.00 0.00 0.00 1.82
86 87 3.324846 GCTTCCTCTGTTTCCCCAAAATT 59.675 43.478 0.00 0.00 0.00 1.82
87 88 2.899900 GCTTCCTCTGTTTCCCCAAAAT 59.100 45.455 0.00 0.00 0.00 1.82
88 89 2.316108 GCTTCCTCTGTTTCCCCAAAA 58.684 47.619 0.00 0.00 0.00 2.44
89 90 1.817740 CGCTTCCTCTGTTTCCCCAAA 60.818 52.381 0.00 0.00 0.00 3.28
90 91 0.250727 CGCTTCCTCTGTTTCCCCAA 60.251 55.000 0.00 0.00 0.00 4.12
91 92 1.374947 CGCTTCCTCTGTTTCCCCA 59.625 57.895 0.00 0.00 0.00 4.96
92 93 1.377333 CCGCTTCCTCTGTTTCCCC 60.377 63.158 0.00 0.00 0.00 4.81
93 94 0.253327 ATCCGCTTCCTCTGTTTCCC 59.747 55.000 0.00 0.00 0.00 3.97
94 95 1.657822 GATCCGCTTCCTCTGTTTCC 58.342 55.000 0.00 0.00 0.00 3.13
95 96 1.135083 TCGATCCGCTTCCTCTGTTTC 60.135 52.381 0.00 0.00 0.00 2.78
96 97 0.895530 TCGATCCGCTTCCTCTGTTT 59.104 50.000 0.00 0.00 0.00 2.83
97 98 1.115467 ATCGATCCGCTTCCTCTGTT 58.885 50.000 0.00 0.00 0.00 3.16
98 99 1.609555 GTATCGATCCGCTTCCTCTGT 59.390 52.381 0.00 0.00 0.00 3.41
99 100 1.883275 AGTATCGATCCGCTTCCTCTG 59.117 52.381 0.00 0.00 0.00 3.35
100 101 2.279935 AGTATCGATCCGCTTCCTCT 57.720 50.000 0.00 0.00 0.00 3.69
101 102 2.608261 CCAAGTATCGATCCGCTTCCTC 60.608 54.545 0.00 0.00 0.00 3.71
102 103 1.341531 CCAAGTATCGATCCGCTTCCT 59.658 52.381 0.00 0.00 0.00 3.36
103 104 1.784525 CCAAGTATCGATCCGCTTCC 58.215 55.000 0.00 0.00 0.00 3.46
104 105 1.140816 GCCAAGTATCGATCCGCTTC 58.859 55.000 0.00 0.00 0.00 3.86
105 106 0.753262 AGCCAAGTATCGATCCGCTT 59.247 50.000 0.00 2.48 0.00 4.68
106 107 0.315568 GAGCCAAGTATCGATCCGCT 59.684 55.000 0.00 2.60 0.00 5.52
107 108 0.315568 AGAGCCAAGTATCGATCCGC 59.684 55.000 0.00 0.00 0.00 5.54
108 109 1.609072 TCAGAGCCAAGTATCGATCCG 59.391 52.381 0.00 0.00 0.00 4.18
109 110 3.735237 TTCAGAGCCAAGTATCGATCC 57.265 47.619 0.00 0.00 0.00 3.36
110 111 5.164954 GGTATTCAGAGCCAAGTATCGATC 58.835 45.833 0.00 0.00 0.00 3.69
111 112 4.588951 TGGTATTCAGAGCCAAGTATCGAT 59.411 41.667 2.16 2.16 0.00 3.59
112 113 3.958147 TGGTATTCAGAGCCAAGTATCGA 59.042 43.478 0.00 0.00 0.00 3.59
113 114 4.038042 TCTGGTATTCAGAGCCAAGTATCG 59.962 45.833 0.00 0.00 46.71 2.92
114 115 5.537300 TCTGGTATTCAGAGCCAAGTATC 57.463 43.478 0.00 0.00 46.71 2.24
125 126 2.628178 TCCCGTAGCATCTGGTATTCAG 59.372 50.000 0.00 0.00 44.68 3.02
126 127 2.673258 TCCCGTAGCATCTGGTATTCA 58.327 47.619 0.00 0.00 0.00 2.57
127 128 3.673594 CGATCCCGTAGCATCTGGTATTC 60.674 52.174 0.00 0.00 0.00 1.75
128 129 2.231478 CGATCCCGTAGCATCTGGTATT 59.769 50.000 0.00 0.00 0.00 1.89
129 130 1.819288 CGATCCCGTAGCATCTGGTAT 59.181 52.381 0.00 0.00 0.00 2.73
130 131 1.244816 CGATCCCGTAGCATCTGGTA 58.755 55.000 0.00 0.00 0.00 3.25
131 132 2.041976 CGATCCCGTAGCATCTGGT 58.958 57.895 0.00 0.00 0.00 4.00
132 133 1.373497 GCGATCCCGTAGCATCTGG 60.373 63.158 0.00 0.00 38.24 3.86
133 134 0.665670 CTGCGATCCCGTAGCATCTG 60.666 60.000 0.00 0.00 41.25 2.90
134 135 1.662608 CTGCGATCCCGTAGCATCT 59.337 57.895 0.00 0.00 41.25 2.90
135 136 4.251760 CTGCGATCCCGTAGCATC 57.748 61.111 0.00 0.00 41.25 3.91
140 141 1.141019 GAGTTGCTGCGATCCCGTA 59.859 57.895 0.00 0.00 38.24 4.02
141 142 2.125512 GAGTTGCTGCGATCCCGT 60.126 61.111 0.00 0.00 38.24 5.28
142 143 2.859273 AAGGAGTTGCTGCGATCCCG 62.859 60.000 12.31 0.00 39.16 5.14
143 144 1.078143 AAGGAGTTGCTGCGATCCC 60.078 57.895 12.31 7.86 31.86 3.85
144 145 2.093216 CAAGGAGTTGCTGCGATCC 58.907 57.895 8.95 8.95 0.00 3.36
153 154 0.813610 TGGTGTGACGCAAGGAGTTG 60.814 55.000 0.00 0.00 46.39 3.16
154 155 0.532862 CTGGTGTGACGCAAGGAGTT 60.533 55.000 0.00 0.00 46.39 3.01
155 156 1.069765 CTGGTGTGACGCAAGGAGT 59.930 57.895 0.00 0.00 46.39 3.85
156 157 1.669115 CCTGGTGTGACGCAAGGAG 60.669 63.158 14.45 0.00 46.39 3.69
157 158 1.480212 ATCCTGGTGTGACGCAAGGA 61.480 55.000 23.48 23.48 46.39 3.36
158 159 1.003355 ATCCTGGTGTGACGCAAGG 60.003 57.895 13.46 13.46 46.39 3.61
160 161 1.449782 ACATCCTGGTGTGACGCAA 59.550 52.632 0.00 0.00 0.00 4.85
161 162 3.147132 ACATCCTGGTGTGACGCA 58.853 55.556 0.00 0.00 0.00 5.24
171 172 1.471676 GCCTCTCGTTACCACATCCTG 60.472 57.143 0.00 0.00 0.00 3.86
172 173 0.824759 GCCTCTCGTTACCACATCCT 59.175 55.000 0.00 0.00 0.00 3.24
173 174 0.535335 TGCCTCTCGTTACCACATCC 59.465 55.000 0.00 0.00 0.00 3.51
174 175 1.476891 TCTGCCTCTCGTTACCACATC 59.523 52.381 0.00 0.00 0.00 3.06
175 176 1.557099 TCTGCCTCTCGTTACCACAT 58.443 50.000 0.00 0.00 0.00 3.21
176 177 1.272490 CTTCTGCCTCTCGTTACCACA 59.728 52.381 0.00 0.00 0.00 4.17
177 178 1.404315 CCTTCTGCCTCTCGTTACCAC 60.404 57.143 0.00 0.00 0.00 4.16
178 179 0.895530 CCTTCTGCCTCTCGTTACCA 59.104 55.000 0.00 0.00 0.00 3.25
179 180 1.183549 TCCTTCTGCCTCTCGTTACC 58.816 55.000 0.00 0.00 0.00 2.85
180 181 3.314541 TTTCCTTCTGCCTCTCGTTAC 57.685 47.619 0.00 0.00 0.00 2.50
181 182 4.253685 CAATTTCCTTCTGCCTCTCGTTA 58.746 43.478 0.00 0.00 0.00 3.18
182 183 3.077359 CAATTTCCTTCTGCCTCTCGTT 58.923 45.455 0.00 0.00 0.00 3.85
183 184 2.704572 CAATTTCCTTCTGCCTCTCGT 58.295 47.619 0.00 0.00 0.00 4.18
184 185 1.399791 GCAATTTCCTTCTGCCTCTCG 59.600 52.381 0.00 0.00 0.00 4.04
185 186 1.399791 CGCAATTTCCTTCTGCCTCTC 59.600 52.381 0.00 0.00 32.27 3.20
186 187 1.271597 ACGCAATTTCCTTCTGCCTCT 60.272 47.619 0.00 0.00 32.27 3.69
187 188 1.135575 CACGCAATTTCCTTCTGCCTC 60.136 52.381 0.00 0.00 32.27 4.70
188 189 0.883833 CACGCAATTTCCTTCTGCCT 59.116 50.000 0.00 0.00 32.27 4.75
189 190 0.109132 CCACGCAATTTCCTTCTGCC 60.109 55.000 0.00 0.00 32.27 4.85
190 191 0.109132 CCCACGCAATTTCCTTCTGC 60.109 55.000 0.00 0.00 0.00 4.26
191 192 0.527565 CCCCACGCAATTTCCTTCTG 59.472 55.000 0.00 0.00 0.00 3.02
192 193 0.404040 TCCCCACGCAATTTCCTTCT 59.596 50.000 0.00 0.00 0.00 2.85
193 194 0.811281 CTCCCCACGCAATTTCCTTC 59.189 55.000 0.00 0.00 0.00 3.46
194 195 0.611896 CCTCCCCACGCAATTTCCTT 60.612 55.000 0.00 0.00 0.00 3.36
195 196 1.000896 CCTCCCCACGCAATTTCCT 60.001 57.895 0.00 0.00 0.00 3.36
196 197 2.710902 GCCTCCCCACGCAATTTCC 61.711 63.158 0.00 0.00 0.00 3.13
197 198 1.937546 CTGCCTCCCCACGCAATTTC 61.938 60.000 0.00 0.00 33.87 2.17
198 199 1.978617 CTGCCTCCCCACGCAATTT 60.979 57.895 0.00 0.00 33.87 1.82
199 200 2.361610 CTGCCTCCCCACGCAATT 60.362 61.111 0.00 0.00 33.87 2.32
200 201 2.826777 CTTCTGCCTCCCCACGCAAT 62.827 60.000 0.00 0.00 33.87 3.56
201 202 3.551496 CTTCTGCCTCCCCACGCAA 62.551 63.158 0.00 0.00 33.87 4.85
202 203 4.020617 CTTCTGCCTCCCCACGCA 62.021 66.667 0.00 0.00 0.00 5.24
203 204 4.785453 CCTTCTGCCTCCCCACGC 62.785 72.222 0.00 0.00 0.00 5.34
204 205 2.124507 TTTCCTTCTGCCTCCCCACG 62.125 60.000 0.00 0.00 0.00 4.94
205 206 0.332972 ATTTCCTTCTGCCTCCCCAC 59.667 55.000 0.00 0.00 0.00 4.61
206 207 1.005924 GAATTTCCTTCTGCCTCCCCA 59.994 52.381 0.00 0.00 0.00 4.96
207 208 1.686428 GGAATTTCCTTCTGCCTCCCC 60.686 57.143 8.25 0.00 34.08 4.81
208 209 1.005924 TGGAATTTCCTTCTGCCTCCC 59.994 52.381 16.25 0.00 37.46 4.30
209 210 2.025887 TCTGGAATTTCCTTCTGCCTCC 60.026 50.000 16.25 0.00 37.46 4.30
210 211 3.054802 TCTCTGGAATTTCCTTCTGCCTC 60.055 47.826 16.25 0.00 37.46 4.70
211 212 2.915604 TCTCTGGAATTTCCTTCTGCCT 59.084 45.455 16.25 0.00 37.46 4.75
212 213 3.356529 TCTCTGGAATTTCCTTCTGCC 57.643 47.619 16.25 0.00 37.46 4.85
213 214 7.067981 ACATTATTCTCTGGAATTTCCTTCTGC 59.932 37.037 16.25 0.00 41.75 4.26
214 215 8.517062 ACATTATTCTCTGGAATTTCCTTCTG 57.483 34.615 16.25 4.86 41.75 3.02
215 216 9.539194 AAACATTATTCTCTGGAATTTCCTTCT 57.461 29.630 16.25 0.00 41.75 2.85
218 219 9.753674 TGTAAACATTATTCTCTGGAATTTCCT 57.246 29.630 16.25 0.00 41.75 3.36
223 224 9.807649 GCAATTGTAAACATTATTCTCTGGAAT 57.192 29.630 7.40 0.00 43.67 3.01
224 225 8.250332 GGCAATTGTAAACATTATTCTCTGGAA 58.750 33.333 7.40 0.00 35.78 3.53
225 226 7.415095 CGGCAATTGTAAACATTATTCTCTGGA 60.415 37.037 7.40 0.00 0.00 3.86
226 227 6.692681 CGGCAATTGTAAACATTATTCTCTGG 59.307 38.462 7.40 0.00 0.00 3.86
227 228 6.692681 CCGGCAATTGTAAACATTATTCTCTG 59.307 38.462 7.40 0.00 0.00 3.35
228 229 6.377146 ACCGGCAATTGTAAACATTATTCTCT 59.623 34.615 0.00 0.00 0.00 3.10
229 230 6.560711 ACCGGCAATTGTAAACATTATTCTC 58.439 36.000 0.00 0.00 0.00 2.87
230 231 6.524101 ACCGGCAATTGTAAACATTATTCT 57.476 33.333 0.00 0.00 0.00 2.40
231 232 6.588373 ACAACCGGCAATTGTAAACATTATTC 59.412 34.615 0.00 0.00 38.51 1.75
232 233 6.459923 ACAACCGGCAATTGTAAACATTATT 58.540 32.000 0.00 0.00 38.51 1.40
233 234 6.031751 ACAACCGGCAATTGTAAACATTAT 57.968 33.333 0.00 0.00 38.51 1.28
234 235 5.455056 ACAACCGGCAATTGTAAACATTA 57.545 34.783 0.00 0.00 38.51 1.90
235 236 4.329462 ACAACCGGCAATTGTAAACATT 57.671 36.364 0.00 0.00 38.51 2.71
236 237 4.038642 AGAACAACCGGCAATTGTAAACAT 59.961 37.500 9.14 0.00 39.36 2.71
237 238 3.381908 AGAACAACCGGCAATTGTAAACA 59.618 39.130 9.14 0.00 39.36 2.83
238 239 3.972403 AGAACAACCGGCAATTGTAAAC 58.028 40.909 9.14 5.16 39.36 2.01
239 240 4.500035 GGAAGAACAACCGGCAATTGTAAA 60.500 41.667 9.14 0.00 39.36 2.01
240 241 3.004944 GGAAGAACAACCGGCAATTGTAA 59.995 43.478 9.14 0.00 39.36 2.41
241 242 2.554893 GGAAGAACAACCGGCAATTGTA 59.445 45.455 9.14 0.00 39.36 2.41
242 243 1.339929 GGAAGAACAACCGGCAATTGT 59.660 47.619 0.00 1.29 42.07 2.71
243 244 1.613437 AGGAAGAACAACCGGCAATTG 59.387 47.619 0.00 0.00 0.00 2.32
244 245 1.886542 GAGGAAGAACAACCGGCAATT 59.113 47.619 0.00 0.00 0.00 2.32
245 246 1.534729 GAGGAAGAACAACCGGCAAT 58.465 50.000 0.00 0.00 0.00 3.56
246 247 0.536460 GGAGGAAGAACAACCGGCAA 60.536 55.000 0.00 0.00 0.00 4.52
247 248 1.072505 GGAGGAAGAACAACCGGCA 59.927 57.895 0.00 0.00 0.00 5.69
248 249 1.674651 GGGAGGAAGAACAACCGGC 60.675 63.158 0.00 0.00 0.00 6.13
249 250 0.400594 AAGGGAGGAAGAACAACCGG 59.599 55.000 0.00 0.00 0.00 5.28
250 251 1.071699 TGAAGGGAGGAAGAACAACCG 59.928 52.381 0.00 0.00 0.00 4.44
251 252 2.158667 TGTGAAGGGAGGAAGAACAACC 60.159 50.000 0.00 0.00 0.00 3.77
252 253 2.879026 GTGTGAAGGGAGGAAGAACAAC 59.121 50.000 0.00 0.00 0.00 3.32
253 254 2.484770 CGTGTGAAGGGAGGAAGAACAA 60.485 50.000 0.00 0.00 0.00 2.83
254 255 1.070134 CGTGTGAAGGGAGGAAGAACA 59.930 52.381 0.00 0.00 0.00 3.18
255 256 1.797025 CGTGTGAAGGGAGGAAGAAC 58.203 55.000 0.00 0.00 0.00 3.01
256 257 0.034896 GCGTGTGAAGGGAGGAAGAA 59.965 55.000 0.00 0.00 0.00 2.52
257 258 0.832135 AGCGTGTGAAGGGAGGAAGA 60.832 55.000 0.00 0.00 0.00 2.87
258 259 0.895530 TAGCGTGTGAAGGGAGGAAG 59.104 55.000 0.00 0.00 0.00 3.46
259 260 0.895530 CTAGCGTGTGAAGGGAGGAA 59.104 55.000 0.00 0.00 0.00 3.36
260 261 1.605058 GCTAGCGTGTGAAGGGAGGA 61.605 60.000 0.00 0.00 0.00 3.71
261 262 1.153549 GCTAGCGTGTGAAGGGAGG 60.154 63.158 0.00 0.00 0.00 4.30
262 263 1.103803 TAGCTAGCGTGTGAAGGGAG 58.896 55.000 9.55 0.00 0.00 4.30
263 264 1.776662 ATAGCTAGCGTGTGAAGGGA 58.223 50.000 9.55 0.00 0.00 4.20
264 265 3.944055 ATATAGCTAGCGTGTGAAGGG 57.056 47.619 9.55 0.00 0.00 3.95
265 266 5.769367 TGTTATATAGCTAGCGTGTGAAGG 58.231 41.667 9.55 0.00 0.00 3.46
266 267 7.875316 ATTGTTATATAGCTAGCGTGTGAAG 57.125 36.000 9.55 0.00 0.00 3.02
267 268 8.141909 AGAATTGTTATATAGCTAGCGTGTGAA 58.858 33.333 9.55 0.00 0.00 3.18
268 269 7.658261 AGAATTGTTATATAGCTAGCGTGTGA 58.342 34.615 9.55 0.00 0.00 3.58
269 270 7.875316 AGAATTGTTATATAGCTAGCGTGTG 57.125 36.000 9.55 0.00 0.00 3.82
277 278 9.892130 GGCCTGTAATAGAATTGTTATATAGCT 57.108 33.333 0.00 0.00 0.00 3.32
278 279 9.667107 TGGCCTGTAATAGAATTGTTATATAGC 57.333 33.333 3.32 0.00 0.00 2.97
281 282 9.284968 GTGTGGCCTGTAATAGAATTGTTATAT 57.715 33.333 3.32 0.00 0.00 0.86
282 283 8.491134 AGTGTGGCCTGTAATAGAATTGTTATA 58.509 33.333 3.32 0.00 0.00 0.98
283 284 7.346471 AGTGTGGCCTGTAATAGAATTGTTAT 58.654 34.615 3.32 0.00 0.00 1.89
284 285 6.717289 AGTGTGGCCTGTAATAGAATTGTTA 58.283 36.000 3.32 0.00 0.00 2.41
285 286 5.570320 AGTGTGGCCTGTAATAGAATTGTT 58.430 37.500 3.32 0.00 0.00 2.83
286 287 5.179452 AGTGTGGCCTGTAATAGAATTGT 57.821 39.130 3.32 0.00 0.00 2.71
287 288 5.760253 CCTAGTGTGGCCTGTAATAGAATTG 59.240 44.000 3.32 0.00 0.00 2.32
288 289 5.687706 GCCTAGTGTGGCCTGTAATAGAATT 60.688 44.000 3.32 0.00 46.82 2.17
289 290 4.202367 GCCTAGTGTGGCCTGTAATAGAAT 60.202 45.833 3.32 0.00 46.82 2.40
290 291 3.134081 GCCTAGTGTGGCCTGTAATAGAA 59.866 47.826 3.32 0.00 46.82 2.10
291 292 2.698797 GCCTAGTGTGGCCTGTAATAGA 59.301 50.000 3.32 0.00 46.82 1.98
292 293 3.113260 GCCTAGTGTGGCCTGTAATAG 57.887 52.381 3.32 3.20 46.82 1.73
303 304 4.028490 TTGGGCCGGCCTAGTGTG 62.028 66.667 42.70 0.00 36.10 3.82
304 305 4.029809 GTTGGGCCGGCCTAGTGT 62.030 66.667 42.70 0.00 36.10 3.55
316 317 3.061848 GTGTGGATGGCCGTTGGG 61.062 66.667 0.00 0.00 36.79 4.12
317 318 2.282110 TGTGTGGATGGCCGTTGG 60.282 61.111 0.00 0.00 36.79 3.77
318 319 1.577328 GAGTGTGTGGATGGCCGTTG 61.577 60.000 0.00 0.00 36.79 4.10
319 320 1.302511 GAGTGTGTGGATGGCCGTT 60.303 57.895 0.00 0.00 36.79 4.44
320 321 2.050836 TTGAGTGTGTGGATGGCCGT 62.051 55.000 0.00 0.00 36.79 5.68
321 322 1.300971 CTTGAGTGTGTGGATGGCCG 61.301 60.000 0.00 0.00 36.79 6.13
322 323 0.962356 CCTTGAGTGTGTGGATGGCC 60.962 60.000 0.00 0.00 0.00 5.36
323 324 1.589716 GCCTTGAGTGTGTGGATGGC 61.590 60.000 0.00 0.00 0.00 4.40
324 325 0.250858 TGCCTTGAGTGTGTGGATGG 60.251 55.000 0.00 0.00 0.00 3.51
325 326 0.877071 GTGCCTTGAGTGTGTGGATG 59.123 55.000 0.00 0.00 0.00 3.51
326 327 0.603707 CGTGCCTTGAGTGTGTGGAT 60.604 55.000 0.00 0.00 0.00 3.41
327 328 1.227527 CGTGCCTTGAGTGTGTGGA 60.228 57.895 0.00 0.00 0.00 4.02
328 329 2.253758 CCGTGCCTTGAGTGTGTGG 61.254 63.158 0.00 0.00 0.00 4.17
329 330 2.896801 GCCGTGCCTTGAGTGTGTG 61.897 63.158 0.00 0.00 0.00 3.82
330 331 2.591715 GCCGTGCCTTGAGTGTGT 60.592 61.111 0.00 0.00 0.00 3.72
331 332 2.121564 CTTGCCGTGCCTTGAGTGTG 62.122 60.000 0.00 0.00 0.00 3.82
332 333 1.893808 CTTGCCGTGCCTTGAGTGT 60.894 57.895 0.00 0.00 0.00 3.55
333 334 2.620112 CCTTGCCGTGCCTTGAGTG 61.620 63.158 0.00 0.00 0.00 3.51
334 335 2.281761 CCTTGCCGTGCCTTGAGT 60.282 61.111 0.00 0.00 0.00 3.41
335 336 3.741476 GCCTTGCCGTGCCTTGAG 61.741 66.667 0.00 0.00 0.00 3.02
346 347 4.043200 GCAACGACCTGGCCTTGC 62.043 66.667 3.32 6.87 32.80 4.01
347 348 2.594303 TGCAACGACCTGGCCTTG 60.594 61.111 3.32 0.00 0.00 3.61
348 349 2.594592 GTGCAACGACCTGGCCTT 60.595 61.111 3.32 0.00 0.00 4.35
349 350 2.697147 AATGTGCAACGACCTGGCCT 62.697 55.000 3.32 0.00 42.39 5.19
350 351 1.805428 AAATGTGCAACGACCTGGCC 61.805 55.000 0.00 0.00 42.39 5.36
351 352 0.664166 CAAATGTGCAACGACCTGGC 60.664 55.000 0.00 0.00 42.39 4.85
352 353 0.039256 CCAAATGTGCAACGACCTGG 60.039 55.000 0.00 0.00 42.39 4.45
353 354 0.667993 ACCAAATGTGCAACGACCTG 59.332 50.000 0.00 0.00 42.39 4.00
354 355 1.398692 AACCAAATGTGCAACGACCT 58.601 45.000 0.00 0.00 42.39 3.85
355 356 2.124122 GAAACCAAATGTGCAACGACC 58.876 47.619 0.00 0.00 42.39 4.79
356 357 3.042887 GAGAAACCAAATGTGCAACGAC 58.957 45.455 0.00 0.00 42.39 4.34
357 358 2.685388 TGAGAAACCAAATGTGCAACGA 59.315 40.909 0.00 0.00 42.39 3.85
358 359 3.077229 TGAGAAACCAAATGTGCAACG 57.923 42.857 0.00 0.00 42.39 4.10
359 360 4.619973 TGATGAGAAACCAAATGTGCAAC 58.380 39.130 0.00 0.00 37.35 4.17
360 361 4.933505 TGATGAGAAACCAAATGTGCAA 57.066 36.364 0.00 0.00 0.00 4.08
361 362 4.933505 TTGATGAGAAACCAAATGTGCA 57.066 36.364 0.00 0.00 0.00 4.57
362 363 5.523188 TGTTTTGATGAGAAACCAAATGTGC 59.477 36.000 0.00 0.00 36.43 4.57
363 364 7.536895 TTGTTTTGATGAGAAACCAAATGTG 57.463 32.000 0.00 0.00 36.43 3.21
364 365 7.169645 CGATTGTTTTGATGAGAAACCAAATGT 59.830 33.333 0.00 0.00 36.43 2.71
397 398 1.072332 TGGAACACGTGGTGATGGG 59.928 57.895 21.57 0.00 36.96 4.00
472 478 2.644212 CCGCTGTCAGCCTGAGACT 61.644 63.158 19.14 0.00 38.18 3.24
474 480 3.385384 CCCGCTGTCAGCCTGAGA 61.385 66.667 19.14 0.00 38.18 3.27
555 563 1.219935 GGGATTCCGCGTGGTAGTT 59.780 57.895 16.01 0.00 36.30 2.24
558 571 2.428925 GGAGGGATTCCGCGTGGTA 61.429 63.158 16.01 5.69 35.91 3.25
740 759 2.764128 GGATGCGGGGTGAGAGGA 60.764 66.667 0.00 0.00 0.00 3.71
928 947 1.133363 CTCGTCTCTCTCTCCCCCTA 58.867 60.000 0.00 0.00 0.00 3.53
934 953 2.184167 CCCGCCTCGTCTCTCTCTC 61.184 68.421 0.00 0.00 0.00 3.20
935 954 1.990160 ATCCCGCCTCGTCTCTCTCT 61.990 60.000 0.00 0.00 0.00 3.10
1077 1119 8.757982 AATTTCTCTAGCATGATACAACCAAT 57.242 30.769 0.00 0.00 0.00 3.16
1113 1155 2.457366 AACTTGAACCTCTACCGCTG 57.543 50.000 0.00 0.00 0.00 5.18
1114 1156 2.496470 CCTAACTTGAACCTCTACCGCT 59.504 50.000 0.00 0.00 0.00 5.52
1116 1158 3.429135 GCTCCTAACTTGAACCTCTACCG 60.429 52.174 0.00 0.00 0.00 4.02
1211 1253 0.724549 GCAACGAACCATGCGTGATA 59.275 50.000 7.72 0.00 41.75 2.15
1234 1276 1.243342 TTTCTGTGCCCAATCGCCTG 61.243 55.000 0.00 0.00 0.00 4.85
1251 1293 2.287368 CGCCGCTTCCTAACAAACTTTT 60.287 45.455 0.00 0.00 0.00 2.27
1373 1416 1.673665 GCAGCTGCAGCAGGTAAGT 60.674 57.895 38.24 15.14 40.40 2.24
1439 1487 4.148079 TGATACCACAAACAGCAATTCCA 58.852 39.130 0.00 0.00 0.00 3.53
1482 1530 7.284034 CACTCCATGTTTCCTATTAGAGCAAAT 59.716 37.037 0.00 0.00 0.00 2.32
1547 1596 0.176449 GCTCATCATTTTGCCCCACC 59.824 55.000 0.00 0.00 0.00 4.61
1868 1917 3.775654 CGGACAGGGGTGAGGCTC 61.776 72.222 7.79 7.79 0.00 4.70
1908 1957 4.971924 AGCTCTGTATGGATAGGGAAGTTT 59.028 41.667 0.00 0.00 0.00 2.66
2022 2071 1.461127 GTAAGCTGTGCGAGAAACCAG 59.539 52.381 0.00 0.00 0.00 4.00
2052 2101 7.616150 ACTGTAACAGTGGTGTATCTTAGAGAT 59.384 37.037 0.00 0.00 43.63 2.75
2104 2153 9.877222 TTATAGACAGGACTGATATGGAAGTAA 57.123 33.333 6.29 0.00 0.00 2.24
2116 2165 6.582636 TGTAAGCCAATTATAGACAGGACTG 58.417 40.000 0.00 0.00 0.00 3.51
2123 2175 8.135529 GGGAAACATTGTAAGCCAATTATAGAC 58.864 37.037 0.00 0.00 41.93 2.59
2126 2178 7.617723 ACAGGGAAACATTGTAAGCCAATTATA 59.382 33.333 0.00 0.00 41.93 0.98
2131 2183 3.571590 ACAGGGAAACATTGTAAGCCAA 58.428 40.909 0.00 0.00 37.49 4.52
2143 2195 3.248363 GCAAGCATCAAAAACAGGGAAAC 59.752 43.478 0.00 0.00 0.00 2.78
2152 2204 4.329528 GTGTTTGACTGCAAGCATCAAAAA 59.670 37.500 22.16 18.03 45.03 1.94
2157 2209 1.264020 TCGTGTTTGACTGCAAGCATC 59.736 47.619 0.00 0.00 45.03 3.91
2158 2210 1.308047 TCGTGTTTGACTGCAAGCAT 58.692 45.000 0.00 0.00 45.03 3.79
2159 2211 1.264020 GATCGTGTTTGACTGCAAGCA 59.736 47.619 0.00 0.00 41.95 3.91
2160 2212 1.400242 GGATCGTGTTTGACTGCAAGC 60.400 52.381 0.00 0.00 37.60 4.01
2161 2213 2.096069 CAGGATCGTGTTTGACTGCAAG 60.096 50.000 7.25 0.00 42.29 4.01
2162 2214 1.872952 CAGGATCGTGTTTGACTGCAA 59.127 47.619 7.25 0.00 0.00 4.08
2163 2215 1.069978 TCAGGATCGTGTTTGACTGCA 59.930 47.619 14.67 0.00 0.00 4.41
2164 2216 1.728971 CTCAGGATCGTGTTTGACTGC 59.271 52.381 14.67 0.00 0.00 4.40
2518 2570 3.306294 GCTCCAGCTTGGCAAAATTTAGT 60.306 43.478 0.00 0.00 37.47 2.24
2727 2779 9.853555 GATATGGTTTGTTTCAATGTCATGTAA 57.146 29.630 0.00 0.00 0.00 2.41
2771 2823 3.788227 AGTGACAATTCCCAGTTAGCA 57.212 42.857 0.00 0.00 0.00 3.49
2813 2865 7.820648 AGAACATTATCTAACAAACCTGCAAG 58.179 34.615 0.00 0.00 0.00 4.01
2851 2903 1.620323 AGAAGGATTGCTTTTGCCCAC 59.380 47.619 0.00 0.00 46.87 4.61
2932 2984 0.037882 CATGACCAGTGAGCGTGTCT 60.038 55.000 0.00 0.00 0.00 3.41
3019 3071 0.108138 AAGGCTGTAGCACATCGGAC 60.108 55.000 6.18 0.00 44.36 4.79
3150 3202 3.053991 TGGGACAAGAACCTGAAACAAGA 60.054 43.478 0.00 0.00 31.92 3.02
3171 3223 6.775088 CATACACTGCTTGGTAATTACACTG 58.225 40.000 17.16 9.38 0.00 3.66
3275 3327 6.634837 CGCATGAAACTGTACAATTTGTTACA 59.365 34.615 7.08 8.95 0.00 2.41
3436 3489 2.918712 AACTCACAGGTGAACAGAGG 57.081 50.000 3.45 0.00 39.39 3.69
3449 3506 3.187432 GGCTAAACTCAGCTGAAACTCAC 59.813 47.826 18.85 6.38 41.50 3.51
3478 3535 7.629222 GCATACATGTTAGATTTTTGCAGGACT 60.629 37.037 2.30 0.00 0.00 3.85
3479 3536 6.473455 GCATACATGTTAGATTTTTGCAGGAC 59.527 38.462 2.30 0.00 0.00 3.85
3482 3539 7.919091 AGATGCATACATGTTAGATTTTTGCAG 59.081 33.333 2.30 0.00 40.46 4.41
3597 3656 6.470556 GTCTTTCAGCTCAAAAACAACTCTTC 59.529 38.462 0.00 0.00 0.00 2.87
3608 3667 5.751680 CATTCGAAAGTCTTTCAGCTCAAA 58.248 37.500 22.14 8.65 39.63 2.69
3618 3677 4.878397 CCTATCCTTGCATTCGAAAGTCTT 59.122 41.667 0.00 0.00 0.00 3.01
3628 3687 4.032310 TGCAAATTCCCTATCCTTGCATT 58.968 39.130 3.80 0.00 45.38 3.56
3679 3738 8.770322 AGCTAATCTCCAAGCAGATATTCATAT 58.230 33.333 0.00 0.00 41.32 1.78
3680 3739 8.143673 AGCTAATCTCCAAGCAGATATTCATA 57.856 34.615 0.00 0.00 41.32 2.15
3681 3740 7.018487 AGCTAATCTCCAAGCAGATATTCAT 57.982 36.000 0.00 0.00 41.32 2.57
3682 3741 6.269538 AGAGCTAATCTCCAAGCAGATATTCA 59.730 38.462 0.00 0.00 42.90 2.57
3683 3742 6.700352 AGAGCTAATCTCCAAGCAGATATTC 58.300 40.000 0.00 0.00 42.90 1.75
3694 3753 6.605471 TGACAACTTAAGAGCTAATCTCCA 57.395 37.500 10.09 0.00 42.90 3.86
3695 3754 7.907214 TTTGACAACTTAAGAGCTAATCTCC 57.093 36.000 10.09 0.00 42.90 3.71
3727 3786 8.959548 TGAATGATGTGATAGTTGCAGTAATTT 58.040 29.630 0.00 0.00 0.00 1.82
3734 3793 4.823442 GGGATGAATGATGTGATAGTTGCA 59.177 41.667 0.00 0.00 0.00 4.08
3789 3848 7.176515 AGTCATGATACAATACACTGCCAAAAA 59.823 33.333 0.00 0.00 0.00 1.94
3790 3849 6.658816 AGTCATGATACAATACACTGCCAAAA 59.341 34.615 0.00 0.00 0.00 2.44
3791 3850 6.179756 AGTCATGATACAATACACTGCCAAA 58.820 36.000 0.00 0.00 0.00 3.28
3792 3851 5.744171 AGTCATGATACAATACACTGCCAA 58.256 37.500 0.00 0.00 0.00 4.52
3793 3852 5.357742 AGTCATGATACAATACACTGCCA 57.642 39.130 0.00 0.00 0.00 4.92
3794 3853 6.931281 ACATAGTCATGATACAATACACTGCC 59.069 38.462 0.00 0.00 35.96 4.85
3795 3854 7.953158 ACATAGTCATGATACAATACACTGC 57.047 36.000 0.00 0.00 35.96 4.40
3796 3855 9.133627 GCTACATAGTCATGATACAATACACTG 57.866 37.037 0.00 0.00 35.96 3.66
3797 3856 8.860088 TGCTACATAGTCATGATACAATACACT 58.140 33.333 0.00 0.00 35.96 3.55
3798 3857 8.916654 GTGCTACATAGTCATGATACAATACAC 58.083 37.037 0.00 0.00 35.96 2.90
3799 3858 8.637986 TGTGCTACATAGTCATGATACAATACA 58.362 33.333 0.00 0.00 35.96 2.29
3800 3859 8.916654 GTGTGCTACATAGTCATGATACAATAC 58.083 37.037 0.00 0.00 35.96 1.89
3801 3860 8.637986 TGTGTGCTACATAGTCATGATACAATA 58.362 33.333 0.00 0.00 35.96 1.90
3802 3861 7.500141 TGTGTGCTACATAGTCATGATACAAT 58.500 34.615 0.00 0.00 35.96 2.71
3803 3862 6.872920 TGTGTGCTACATAGTCATGATACAA 58.127 36.000 0.00 0.00 35.96 2.41
3804 3863 6.463995 TGTGTGCTACATAGTCATGATACA 57.536 37.500 0.00 0.00 35.96 2.29
3817 3876 5.335583 GCTTACAATCCAAATGTGTGCTACA 60.336 40.000 0.00 0.00 44.87 2.74
3818 3877 5.095490 GCTTACAATCCAAATGTGTGCTAC 58.905 41.667 0.00 0.00 31.93 3.58
3819 3878 5.009631 AGCTTACAATCCAAATGTGTGCTA 58.990 37.500 6.49 0.00 38.19 3.49
3820 3879 3.828451 AGCTTACAATCCAAATGTGTGCT 59.172 39.130 0.00 0.00 36.53 4.40
3821 3880 4.178545 AGCTTACAATCCAAATGTGTGC 57.821 40.909 0.00 0.00 33.54 4.57
3822 3881 6.925165 AGAAAAGCTTACAATCCAAATGTGTG 59.075 34.615 0.00 0.00 32.27 3.82
3823 3882 7.054491 AGAAAAGCTTACAATCCAAATGTGT 57.946 32.000 0.00 0.00 32.27 3.72
3824 3883 9.079833 CATAGAAAAGCTTACAATCCAAATGTG 57.920 33.333 0.00 0.00 32.27 3.21
3825 3884 8.806146 ACATAGAAAAGCTTACAATCCAAATGT 58.194 29.630 0.00 4.64 34.81 2.71
3828 3887 9.515226 ACTACATAGAAAAGCTTACAATCCAAA 57.485 29.630 0.00 0.00 0.00 3.28
3830 3889 9.595823 GTACTACATAGAAAAGCTTACAATCCA 57.404 33.333 0.00 0.00 0.00 3.41
3831 3890 9.595823 TGTACTACATAGAAAAGCTTACAATCC 57.404 33.333 0.00 0.00 0.00 3.01
3833 3892 9.938280 TGTGTACTACATAGAAAAGCTTACAAT 57.062 29.630 0.00 0.00 33.42 2.71
3834 3893 9.199982 GTGTGTACTACATAGAAAAGCTTACAA 57.800 33.333 0.00 0.00 42.24 2.41
3835 3894 7.539710 CGTGTGTACTACATAGAAAAGCTTACA 59.460 37.037 0.00 0.00 42.24 2.41
3836 3895 7.540055 ACGTGTGTACTACATAGAAAAGCTTAC 59.460 37.037 0.00 0.00 42.24 2.34
3837 3896 7.539710 CACGTGTGTACTACATAGAAAAGCTTA 59.460 37.037 7.58 0.00 42.24 3.09
3838 3897 6.365247 CACGTGTGTACTACATAGAAAAGCTT 59.635 38.462 7.58 0.00 42.24 3.74
3839 3898 5.862323 CACGTGTGTACTACATAGAAAAGCT 59.138 40.000 7.58 0.00 42.24 3.74
3840 3899 5.632347 ACACGTGTGTACTACATAGAAAAGC 59.368 40.000 22.71 0.00 42.90 3.51
3855 3914 7.667043 ACAAAAGATCATAATACACGTGTGT 57.333 32.000 30.83 22.24 46.87 3.72
3856 3915 9.689075 CTAACAAAAGATCATAATACACGTGTG 57.311 33.333 30.83 13.95 0.00 3.82
3857 3916 9.431887 ACTAACAAAAGATCATAATACACGTGT 57.568 29.630 26.52 26.52 0.00 4.49
3858 3917 9.689075 CACTAACAAAAGATCATAATACACGTG 57.311 33.333 15.48 15.48 0.00 4.49
3859 3918 9.431887 ACACTAACAAAAGATCATAATACACGT 57.568 29.630 0.00 0.00 0.00 4.49
3860 3919 9.689075 CACACTAACAAAAGATCATAATACACG 57.311 33.333 0.00 0.00 0.00 4.49
3868 3927 9.467258 CAATTGAACACACTAACAAAAGATCAT 57.533 29.630 0.00 0.00 0.00 2.45
3869 3928 8.681806 TCAATTGAACACACTAACAAAAGATCA 58.318 29.630 5.45 0.00 0.00 2.92
3870 3929 9.683069 ATCAATTGAACACACTAACAAAAGATC 57.317 29.630 13.09 0.00 0.00 2.75
3871 3930 9.467258 CATCAATTGAACACACTAACAAAAGAT 57.533 29.630 13.09 0.00 0.00 2.40
3872 3931 8.465999 ACATCAATTGAACACACTAACAAAAGA 58.534 29.630 13.09 0.00 0.00 2.52
3873 3932 8.633075 ACATCAATTGAACACACTAACAAAAG 57.367 30.769 13.09 0.00 0.00 2.27
3875 3934 9.676195 CATACATCAATTGAACACACTAACAAA 57.324 29.630 13.09 0.00 0.00 2.83
3876 3935 8.845227 ACATACATCAATTGAACACACTAACAA 58.155 29.630 13.09 0.00 0.00 2.83
3877 3936 8.389779 ACATACATCAATTGAACACACTAACA 57.610 30.769 13.09 0.00 0.00 2.41
3878 3937 9.677567 AAACATACATCAATTGAACACACTAAC 57.322 29.630 13.09 0.00 0.00 2.34
3880 3939 9.676195 CAAAACATACATCAATTGAACACACTA 57.324 29.630 13.09 0.00 0.00 2.74
3881 3940 8.412456 TCAAAACATACATCAATTGAACACACT 58.588 29.630 13.09 0.00 0.00 3.55
3882 3941 8.572828 TCAAAACATACATCAATTGAACACAC 57.427 30.769 13.09 0.00 0.00 3.82
3883 3942 8.628280 TCTCAAAACATACATCAATTGAACACA 58.372 29.630 13.09 0.00 0.00 3.72
3884 3943 9.630098 ATCTCAAAACATACATCAATTGAACAC 57.370 29.630 13.09 0.00 0.00 3.32
3892 3951 8.236586 GCACAGTTATCTCAAAACATACATCAA 58.763 33.333 0.00 0.00 0.00 2.57
3893 3952 7.390162 TGCACAGTTATCTCAAAACATACATCA 59.610 33.333 0.00 0.00 0.00 3.07
3894 3953 7.751732 TGCACAGTTATCTCAAAACATACATC 58.248 34.615 0.00 0.00 0.00 3.06
3895 3954 7.607607 TCTGCACAGTTATCTCAAAACATACAT 59.392 33.333 0.00 0.00 0.00 2.29
3896 3955 6.934083 TCTGCACAGTTATCTCAAAACATACA 59.066 34.615 0.00 0.00 0.00 2.29
3897 3956 7.364522 TCTGCACAGTTATCTCAAAACATAC 57.635 36.000 0.00 0.00 0.00 2.39
3898 3957 7.977789 TTCTGCACAGTTATCTCAAAACATA 57.022 32.000 0.00 0.00 0.00 2.29
3899 3958 6.882610 TTCTGCACAGTTATCTCAAAACAT 57.117 33.333 0.00 0.00 0.00 2.71
3900 3959 6.494842 GTTTCTGCACAGTTATCTCAAAACA 58.505 36.000 0.00 0.00 0.00 2.83
3901 3960 5.621228 CGTTTCTGCACAGTTATCTCAAAAC 59.379 40.000 0.00 0.00 0.00 2.43
3902 3961 5.295787 ACGTTTCTGCACAGTTATCTCAAAA 59.704 36.000 0.00 0.00 0.00 2.44
3903 3962 4.814234 ACGTTTCTGCACAGTTATCTCAAA 59.186 37.500 0.00 0.00 0.00 2.69
3904 3963 4.377021 ACGTTTCTGCACAGTTATCTCAA 58.623 39.130 0.00 0.00 0.00 3.02
3905 3964 3.990092 ACGTTTCTGCACAGTTATCTCA 58.010 40.909 0.00 0.00 0.00 3.27
3906 3965 4.992381 AACGTTTCTGCACAGTTATCTC 57.008 40.909 0.00 0.00 0.00 2.75
3907 3966 6.854496 TTTAACGTTTCTGCACAGTTATCT 57.146 33.333 5.91 0.00 0.00 1.98
3908 3967 6.908284 TGTTTTAACGTTTCTGCACAGTTATC 59.092 34.615 5.91 0.00 0.00 1.75
3909 3968 6.787225 TGTTTTAACGTTTCTGCACAGTTAT 58.213 32.000 5.91 0.00 0.00 1.89
3910 3969 6.179504 TGTTTTAACGTTTCTGCACAGTTA 57.820 33.333 5.91 0.00 0.00 2.24
3911 3970 5.049398 TGTTTTAACGTTTCTGCACAGTT 57.951 34.783 5.91 0.00 0.00 3.16
3912 3971 4.688511 TGTTTTAACGTTTCTGCACAGT 57.311 36.364 5.91 0.00 0.00 3.55
3913 3972 5.092781 AGTTGTTTTAACGTTTCTGCACAG 58.907 37.500 5.91 0.00 0.00 3.66
3914 3973 5.049398 AGTTGTTTTAACGTTTCTGCACA 57.951 34.783 5.91 0.14 0.00 4.57
3915 3974 5.090083 TGAGTTGTTTTAACGTTTCTGCAC 58.910 37.500 5.91 0.00 0.00 4.57
3916 3975 5.298197 TGAGTTGTTTTAACGTTTCTGCA 57.702 34.783 5.91 0.00 0.00 4.41
3917 3976 5.331532 GCATGAGTTGTTTTAACGTTTCTGC 60.332 40.000 5.91 3.95 0.00 4.26
3918 3977 5.971202 AGCATGAGTTGTTTTAACGTTTCTG 59.029 36.000 5.91 0.00 0.00 3.02
3919 3978 6.131544 AGCATGAGTTGTTTTAACGTTTCT 57.868 33.333 5.91 0.00 0.00 2.52
3920 3979 7.901874 TTAGCATGAGTTGTTTTAACGTTTC 57.098 32.000 5.91 0.00 0.00 2.78
3921 3980 8.690680 TTTTAGCATGAGTTGTTTTAACGTTT 57.309 26.923 5.91 0.00 0.00 3.60
3922 3981 8.690680 TTTTTAGCATGAGTTGTTTTAACGTT 57.309 26.923 5.88 5.88 0.00 3.99
3944 4003 6.346096 TCGTGCATTACTATAGAGGCTTTTT 58.654 36.000 6.78 0.00 0.00 1.94
3945 4004 5.914033 TCGTGCATTACTATAGAGGCTTTT 58.086 37.500 6.78 0.00 0.00 2.27
3946 4005 5.531122 TCGTGCATTACTATAGAGGCTTT 57.469 39.130 6.78 0.00 0.00 3.51
3947 4006 4.559704 GCTCGTGCATTACTATAGAGGCTT 60.560 45.833 6.78 0.00 39.41 4.35
3948 4007 3.057174 GCTCGTGCATTACTATAGAGGCT 60.057 47.826 6.78 0.00 39.41 4.58
3949 4008 3.246619 GCTCGTGCATTACTATAGAGGC 58.753 50.000 6.78 0.00 39.41 4.70
3950 4009 4.505313 TGCTCGTGCATTACTATAGAGG 57.495 45.455 8.30 0.00 45.31 3.69
3962 4021 5.146696 CAATGGAATTCAAATGCTCGTGCA 61.147 41.667 15.29 15.29 44.81 4.57
3963 4022 2.634982 TGGAATTCAAATGCTCGTGC 57.365 45.000 7.93 1.71 40.20 5.34
3964 4023 4.487948 ACAATGGAATTCAAATGCTCGTG 58.512 39.130 7.93 0.00 31.22 4.35
3965 4024 4.789012 ACAATGGAATTCAAATGCTCGT 57.211 36.364 7.93 0.00 31.22 4.18
3966 4025 5.036737 GGTACAATGGAATTCAAATGCTCG 58.963 41.667 7.93 0.00 31.22 5.03
3967 4026 5.964758 TGGTACAATGGAATTCAAATGCTC 58.035 37.500 7.93 0.00 31.22 4.26
3968 4027 5.999205 TGGTACAATGGAATTCAAATGCT 57.001 34.783 7.93 0.00 31.22 3.79
3978 4037 8.923270 AAGATCTTTCTTTTTGGTACAATGGAA 58.077 29.630 0.88 0.00 41.09 3.53
3979 4038 8.477419 AAGATCTTTCTTTTTGGTACAATGGA 57.523 30.769 0.88 0.00 41.09 3.41
3980 4039 8.579863 AGAAGATCTTTCTTTTTGGTACAATGG 58.420 33.333 9.87 0.00 42.97 3.16
3987 4046 9.520515 TTGCTATAGAAGATCTTTCTTTTTGGT 57.479 29.630 9.87 0.00 42.34 3.67
3991 4050 9.182214 TGCATTGCTATAGAAGATCTTTCTTTT 57.818 29.630 9.87 3.24 42.34 2.27
3992 4051 8.743085 TGCATTGCTATAGAAGATCTTTCTTT 57.257 30.769 9.87 6.32 42.34 2.52
3993 4052 8.784994 CATGCATTGCTATAGAAGATCTTTCTT 58.215 33.333 9.87 1.58 44.99 2.52
3994 4053 8.155510 TCATGCATTGCTATAGAAGATCTTTCT 58.844 33.333 9.87 10.46 0.00 2.52
3995 4054 8.320396 TCATGCATTGCTATAGAAGATCTTTC 57.680 34.615 9.87 3.26 0.00 2.62
3996 4055 7.094720 GCTCATGCATTGCTATAGAAGATCTTT 60.095 37.037 9.87 2.63 39.41 2.52
3997 4056 6.372103 GCTCATGCATTGCTATAGAAGATCTT 59.628 38.462 7.95 7.95 39.41 2.40
3998 4057 5.875910 GCTCATGCATTGCTATAGAAGATCT 59.124 40.000 10.49 0.00 39.41 2.75
3999 4058 5.064962 GGCTCATGCATTGCTATAGAAGATC 59.935 44.000 17.59 0.00 41.91 2.75
4000 4059 4.942483 GGCTCATGCATTGCTATAGAAGAT 59.058 41.667 17.59 0.00 41.91 2.40
4001 4060 4.041321 AGGCTCATGCATTGCTATAGAAGA 59.959 41.667 17.59 0.00 41.91 2.87
4002 4061 4.325119 AGGCTCATGCATTGCTATAGAAG 58.675 43.478 17.59 0.75 41.91 2.85
4003 4062 4.362470 AGGCTCATGCATTGCTATAGAA 57.638 40.909 17.59 0.00 41.91 2.10
4004 4063 4.362470 AAGGCTCATGCATTGCTATAGA 57.638 40.909 17.59 1.67 41.92 1.98
4005 4064 6.206243 AGTTAAAGGCTCATGCATTGCTATAG 59.794 38.462 17.59 5.41 42.74 1.31
4006 4065 6.064060 AGTTAAAGGCTCATGCATTGCTATA 58.936 36.000 17.59 8.46 42.74 1.31
4007 4066 4.891756 AGTTAAAGGCTCATGCATTGCTAT 59.108 37.500 17.59 7.37 42.74 2.97
4008 4067 4.272489 AGTTAAAGGCTCATGCATTGCTA 58.728 39.130 17.59 0.00 42.74 3.49
4009 4068 3.094572 AGTTAAAGGCTCATGCATTGCT 58.905 40.909 17.59 4.73 42.74 3.91
4010 4069 3.515330 AGTTAAAGGCTCATGCATTGC 57.485 42.857 11.76 11.76 42.74 3.56
4011 4070 5.320549 AGAAGTTAAAGGCTCATGCATTG 57.679 39.130 0.00 0.00 42.74 2.82
4012 4071 5.990120 AAGAAGTTAAAGGCTCATGCATT 57.010 34.783 0.00 0.00 45.68 3.56
4013 4072 5.990120 AAAGAAGTTAAAGGCTCATGCAT 57.010 34.783 0.00 0.00 41.91 3.96
4014 4073 5.789643 AAAAGAAGTTAAAGGCTCATGCA 57.210 34.783 0.00 0.00 41.91 3.96
4015 4074 7.315890 ACATAAAAGAAGTTAAAGGCTCATGC 58.684 34.615 0.00 0.00 38.76 4.06
4016 4075 9.696917 AAACATAAAAGAAGTTAAAGGCTCATG 57.303 29.630 0.00 0.00 0.00 3.07
4017 4076 9.696917 CAAACATAAAAGAAGTTAAAGGCTCAT 57.303 29.630 0.00 0.00 0.00 2.90
4018 4077 7.651704 GCAAACATAAAAGAAGTTAAAGGCTCA 59.348 33.333 0.00 0.00 0.00 4.26
4019 4078 7.148967 CGCAAACATAAAAGAAGTTAAAGGCTC 60.149 37.037 0.00 0.00 0.00 4.70
4020 4079 6.640907 CGCAAACATAAAAGAAGTTAAAGGCT 59.359 34.615 0.00 0.00 0.00 4.58
4021 4080 6.639279 TCGCAAACATAAAAGAAGTTAAAGGC 59.361 34.615 0.00 0.00 0.00 4.35
4022 4081 8.638565 CATCGCAAACATAAAAGAAGTTAAAGG 58.361 33.333 0.00 0.00 0.00 3.11
4023 4082 9.393249 TCATCGCAAACATAAAAGAAGTTAAAG 57.607 29.630 0.00 0.00 0.00 1.85
4024 4083 9.737427 TTCATCGCAAACATAAAAGAAGTTAAA 57.263 25.926 0.00 0.00 0.00 1.52
4025 4084 9.393249 CTTCATCGCAAACATAAAAGAAGTTAA 57.607 29.630 0.00 0.00 0.00 2.01
4026 4085 7.537306 GCTTCATCGCAAACATAAAAGAAGTTA 59.463 33.333 0.00 0.00 34.15 2.24
4027 4086 6.363357 GCTTCATCGCAAACATAAAAGAAGTT 59.637 34.615 0.00 0.00 34.15 2.66
4028 4087 5.858581 GCTTCATCGCAAACATAAAAGAAGT 59.141 36.000 0.00 0.00 34.15 3.01
4029 4088 5.858049 TGCTTCATCGCAAACATAAAAGAAG 59.142 36.000 0.00 0.00 36.89 2.85
4030 4089 5.767269 TGCTTCATCGCAAACATAAAAGAA 58.233 33.333 0.00 0.00 36.89 2.52
4031 4090 5.369685 TGCTTCATCGCAAACATAAAAGA 57.630 34.783 0.00 0.00 36.89 2.52
4032 4091 6.636666 AATGCTTCATCGCAAACATAAAAG 57.363 33.333 0.00 0.00 44.06 2.27
4033 4092 6.644181 TCAAATGCTTCATCGCAAACATAAAA 59.356 30.769 0.00 0.00 44.06 1.52
4034 4093 6.089283 GTCAAATGCTTCATCGCAAACATAAA 59.911 34.615 0.00 0.00 44.06 1.40
4035 4094 5.572511 GTCAAATGCTTCATCGCAAACATAA 59.427 36.000 0.00 0.00 44.06 1.90
4036 4095 5.094812 GTCAAATGCTTCATCGCAAACATA 58.905 37.500 0.00 0.00 44.06 2.29
4037 4096 3.922240 GTCAAATGCTTCATCGCAAACAT 59.078 39.130 0.00 0.00 44.06 2.71
4038 4097 3.004629 AGTCAAATGCTTCATCGCAAACA 59.995 39.130 0.00 0.00 44.06 2.83
4039 4098 3.568538 AGTCAAATGCTTCATCGCAAAC 58.431 40.909 0.00 0.00 44.06 2.93
4040 4099 3.921119 AGTCAAATGCTTCATCGCAAA 57.079 38.095 0.00 0.00 44.06 3.68
4041 4100 3.366273 GGAAGTCAAATGCTTCATCGCAA 60.366 43.478 14.83 0.00 44.06 4.85
4042 4101 2.162208 GGAAGTCAAATGCTTCATCGCA 59.838 45.455 14.83 0.00 42.88 5.10
4043 4102 2.162208 TGGAAGTCAAATGCTTCATCGC 59.838 45.455 14.83 0.00 42.88 4.58
4044 4103 4.627611 ATGGAAGTCAAATGCTTCATCG 57.372 40.909 14.83 0.00 42.88 3.84
4051 4110 9.846248 GGACATAATATAATGGAAGTCAAATGC 57.154 33.333 0.00 0.00 0.00 3.56
4056 4115 9.739276 GGAATGGACATAATATAATGGAAGTCA 57.261 33.333 0.00 0.00 0.00 3.41
4057 4116 9.965902 AGGAATGGACATAATATAATGGAAGTC 57.034 33.333 0.00 0.00 0.00 3.01
4073 4132 9.573166 CCAATGTCTTATATTTAGGAATGGACA 57.427 33.333 0.00 0.00 36.01 4.02
4074 4133 9.014297 CCCAATGTCTTATATTTAGGAATGGAC 57.986 37.037 0.00 0.00 0.00 4.02
4075 4134 8.170061 CCCCAATGTCTTATATTTAGGAATGGA 58.830 37.037 0.00 0.00 0.00 3.41
4076 4135 7.093771 GCCCCAATGTCTTATATTTAGGAATGG 60.094 40.741 0.00 0.00 0.00 3.16
4077 4136 7.451255 TGCCCCAATGTCTTATATTTAGGAATG 59.549 37.037 0.00 0.00 0.00 2.67
4078 4137 7.534852 TGCCCCAATGTCTTATATTTAGGAAT 58.465 34.615 0.00 0.00 0.00 3.01
4079 4138 6.916909 TGCCCCAATGTCTTATATTTAGGAA 58.083 36.000 0.00 0.00 0.00 3.36
4080 4139 6.523035 TGCCCCAATGTCTTATATTTAGGA 57.477 37.500 0.00 0.00 0.00 2.94
4081 4140 5.183904 GCTGCCCCAATGTCTTATATTTAGG 59.816 44.000 0.00 0.00 0.00 2.69
4082 4141 6.006449 AGCTGCCCCAATGTCTTATATTTAG 58.994 40.000 0.00 0.00 0.00 1.85
4083 4142 5.952387 AGCTGCCCCAATGTCTTATATTTA 58.048 37.500 0.00 0.00 0.00 1.40
4084 4143 4.808042 AGCTGCCCCAATGTCTTATATTT 58.192 39.130 0.00 0.00 0.00 1.40
4085 4144 4.459852 AGCTGCCCCAATGTCTTATATT 57.540 40.909 0.00 0.00 0.00 1.28
4086 4145 4.459852 AAGCTGCCCCAATGTCTTATAT 57.540 40.909 0.00 0.00 0.00 0.86
4087 4146 3.951563 AAGCTGCCCCAATGTCTTATA 57.048 42.857 0.00 0.00 0.00 0.98
4088 4147 2.834638 AAGCTGCCCCAATGTCTTAT 57.165 45.000 0.00 0.00 0.00 1.73
4089 4148 3.730215 TTAAGCTGCCCCAATGTCTTA 57.270 42.857 0.00 0.00 0.00 2.10
4090 4149 2.603075 TTAAGCTGCCCCAATGTCTT 57.397 45.000 0.00 0.00 0.00 3.01
4091 4150 2.834638 ATTAAGCTGCCCCAATGTCT 57.165 45.000 0.00 0.00 0.00 3.41
4092 4151 3.893326 AAATTAAGCTGCCCCAATGTC 57.107 42.857 0.00 0.00 0.00 3.06
4093 4152 5.343307 CTTAAATTAAGCTGCCCCAATGT 57.657 39.130 0.00 0.00 0.00 2.71
4105 4164 5.185828 AGAAGTTGGGGCAGCTTAAATTAAG 59.814 40.000 8.32 8.32 35.20 1.85
4106 4165 5.083821 AGAAGTTGGGGCAGCTTAAATTAA 58.916 37.500 0.00 0.00 35.20 1.40
4107 4166 4.672899 AGAAGTTGGGGCAGCTTAAATTA 58.327 39.130 0.00 0.00 35.20 1.40
4108 4167 3.510459 AGAAGTTGGGGCAGCTTAAATT 58.490 40.909 0.00 0.00 35.20 1.82
4109 4168 3.175438 AGAAGTTGGGGCAGCTTAAAT 57.825 42.857 0.00 0.00 35.20 1.40
4110 4169 2.675658 AGAAGTTGGGGCAGCTTAAA 57.324 45.000 0.00 0.00 35.20 1.52
4111 4170 2.675658 AAGAAGTTGGGGCAGCTTAA 57.324 45.000 0.00 0.00 35.20 1.85
4112 4171 5.646692 ATATAAGAAGTTGGGGCAGCTTA 57.353 39.130 0.00 0.00 35.20 3.09
4113 4172 2.907458 ATAAGAAGTTGGGGCAGCTT 57.093 45.000 0.00 0.00 37.60 3.74
4114 4173 4.526438 AATATAAGAAGTTGGGGCAGCT 57.474 40.909 0.00 0.00 0.00 4.24
4115 4174 5.351458 CAAAATATAAGAAGTTGGGGCAGC 58.649 41.667 0.00 0.00 0.00 5.25
4116 4175 5.906073 CCAAAATATAAGAAGTTGGGGCAG 58.094 41.667 0.00 0.00 36.00 4.85
4117 4176 5.930837 CCAAAATATAAGAAGTTGGGGCA 57.069 39.130 0.00 0.00 36.00 5.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.