Multiple sequence alignment - TraesCS7B01G352300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G352300 chr7B 100.000 3305 0 0 1 3305 608877503 608874199 0.000000e+00 6104.0
1 TraesCS7B01G352300 chr7B 95.982 871 27 3 2436 3305 392858677 392859540 0.000000e+00 1408.0
2 TraesCS7B01G352300 chr7A 92.875 1586 79 17 722 2295 645038329 645039892 0.000000e+00 2272.0
3 TraesCS7B01G352300 chr7D 92.691 1587 59 29 721 2293 560892155 560893698 0.000000e+00 2235.0
4 TraesCS7B01G352300 chr7D 92.770 982 53 1 1314 2295 560982791 560983754 0.000000e+00 1404.0
5 TraesCS7B01G352300 chr7D 88.889 639 46 14 607 1240 560982175 560982793 0.000000e+00 763.0
6 TraesCS7B01G352300 chr7D 94.231 52 3 0 790 841 560989976 560989925 2.730000e-11 80.5
7 TraesCS7B01G352300 chr4B 88.957 1304 108 21 1010 2295 404123849 404125134 0.000000e+00 1578.0
8 TraesCS7B01G352300 chr4D 88.897 1306 107 23 1010 2296 323603070 323604356 0.000000e+00 1574.0
9 TraesCS7B01G352300 chr4D 95.266 866 38 2 2435 3299 8140749 8141612 0.000000e+00 1369.0
10 TraesCS7B01G352300 chr4D 78.166 1003 179 27 1298 2289 323583262 323582289 1.310000e-168 603.0
11 TraesCS7B01G352300 chr4A 88.435 1297 122 18 1013 2295 147653747 147652465 0.000000e+00 1539.0
12 TraesCS7B01G352300 chr4A 78.095 1050 186 32 1253 2289 148126618 148127636 2.800000e-175 625.0
13 TraesCS7B01G352300 chr4A 89.216 102 10 1 2292 2392 682993219 682993118 3.460000e-25 126.0
14 TraesCS7B01G352300 chr1B 95.069 872 42 1 2435 3305 615613675 615612804 0.000000e+00 1371.0
15 TraesCS7B01G352300 chr6D 94.948 871 43 1 2436 3305 210730072 210729202 0.000000e+00 1363.0
16 TraesCS7B01G352300 chr1D 94.925 867 42 2 2434 3299 464267612 464268477 0.000000e+00 1356.0
17 TraesCS7B01G352300 chr5D 94.713 870 41 4 2434 3299 14736872 14737740 0.000000e+00 1347.0
18 TraesCS7B01G352300 chr2B 94.676 864 45 1 2438 3300 67917377 67916514 0.000000e+00 1339.0
19 TraesCS7B01G352300 chr2D 93.898 885 46 7 2428 3305 451928847 451929730 0.000000e+00 1328.0
20 TraesCS7B01G352300 chr2D 93.871 881 49 5 2430 3305 607960285 607959405 0.000000e+00 1323.0
21 TraesCS7B01G352300 chr1A 86.719 128 15 2 2297 2423 441837907 441837781 1.240000e-29 141.0
22 TraesCS7B01G352300 chr3A 90.909 99 8 1 2295 2392 572548945 572548847 7.440000e-27 132.0
23 TraesCS7B01G352300 chr6A 91.398 93 7 1 2298 2389 616220063 616220155 3.460000e-25 126.0
24 TraesCS7B01G352300 chr6A 93.827 81 4 1 2295 2374 553764596 553764676 1.610000e-23 121.0
25 TraesCS7B01G352300 chr5B 89.320 103 8 3 2295 2395 545522876 545522775 3.460000e-25 126.0
26 TraesCS7B01G352300 chrUn 86.885 61 8 0 2331 2391 37862112 37862052 5.920000e-08 69.4
27 TraesCS7B01G352300 chr3D 90.909 44 4 0 2331 2374 18294292 18294335 3.560000e-05 60.2
28 TraesCS7B01G352300 chr3D 100.000 32 0 0 2331 2362 18617051 18617082 3.560000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G352300 chr7B 608874199 608877503 3304 True 6104.0 6104 100.0000 1 3305 1 chr7B.!!$R1 3304
1 TraesCS7B01G352300 chr7B 392858677 392859540 863 False 1408.0 1408 95.9820 2436 3305 1 chr7B.!!$F1 869
2 TraesCS7B01G352300 chr7A 645038329 645039892 1563 False 2272.0 2272 92.8750 722 2295 1 chr7A.!!$F1 1573
3 TraesCS7B01G352300 chr7D 560892155 560893698 1543 False 2235.0 2235 92.6910 721 2293 1 chr7D.!!$F1 1572
4 TraesCS7B01G352300 chr7D 560982175 560983754 1579 False 1083.5 1404 90.8295 607 2295 2 chr7D.!!$F2 1688
5 TraesCS7B01G352300 chr4B 404123849 404125134 1285 False 1578.0 1578 88.9570 1010 2295 1 chr4B.!!$F1 1285
6 TraesCS7B01G352300 chr4D 323603070 323604356 1286 False 1574.0 1574 88.8970 1010 2296 1 chr4D.!!$F2 1286
7 TraesCS7B01G352300 chr4D 8140749 8141612 863 False 1369.0 1369 95.2660 2435 3299 1 chr4D.!!$F1 864
8 TraesCS7B01G352300 chr4D 323582289 323583262 973 True 603.0 603 78.1660 1298 2289 1 chr4D.!!$R1 991
9 TraesCS7B01G352300 chr4A 147652465 147653747 1282 True 1539.0 1539 88.4350 1013 2295 1 chr4A.!!$R1 1282
10 TraesCS7B01G352300 chr4A 148126618 148127636 1018 False 625.0 625 78.0950 1253 2289 1 chr4A.!!$F1 1036
11 TraesCS7B01G352300 chr1B 615612804 615613675 871 True 1371.0 1371 95.0690 2435 3305 1 chr1B.!!$R1 870
12 TraesCS7B01G352300 chr6D 210729202 210730072 870 True 1363.0 1363 94.9480 2436 3305 1 chr6D.!!$R1 869
13 TraesCS7B01G352300 chr1D 464267612 464268477 865 False 1356.0 1356 94.9250 2434 3299 1 chr1D.!!$F1 865
14 TraesCS7B01G352300 chr5D 14736872 14737740 868 False 1347.0 1347 94.7130 2434 3299 1 chr5D.!!$F1 865
15 TraesCS7B01G352300 chr2B 67916514 67917377 863 True 1339.0 1339 94.6760 2438 3300 1 chr2B.!!$R1 862
16 TraesCS7B01G352300 chr2D 451928847 451929730 883 False 1328.0 1328 93.8980 2428 3305 1 chr2D.!!$F1 877
17 TraesCS7B01G352300 chr2D 607959405 607960285 880 True 1323.0 1323 93.8710 2430 3305 1 chr2D.!!$R1 875

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
261 262 0.035439 CTAGTTGGACCGTGGCCATT 60.035 55.0 9.72 0.0 34.9 3.16 F
825 830 0.036765 AGCGAAAATACAGCCGACCA 60.037 50.0 0.00 0.0 0.0 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1929 1967 0.390472 CGCTCTCCAGGAACACCTTC 60.390 60.0 0.00 0.0 30.75 3.46 R
2375 2413 0.179045 GTGAATACAGCGGGCCAGAT 60.179 55.0 7.23 0.0 0.00 2.90 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.463930 TCTCTTCTTTACCAACATGACAAATT 57.536 30.769 0.00 0.00 0.00 1.82
26 27 8.912988 TCTCTTCTTTACCAACATGACAAATTT 58.087 29.630 0.00 0.00 0.00 1.82
28 29 9.959749 TCTTCTTTACCAACATGACAAATTTAC 57.040 29.630 0.00 0.00 0.00 2.01
29 30 9.965824 CTTCTTTACCAACATGACAAATTTACT 57.034 29.630 0.00 0.00 0.00 2.24
75 76 9.566432 TTTTTACTTTATGCACCATGGAAATTT 57.434 25.926 21.47 1.37 0.00 1.82
76 77 9.566432 TTTTACTTTATGCACCATGGAAATTTT 57.434 25.926 21.47 0.23 0.00 1.82
78 79 9.646427 TTACTTTATGCACCATGGAAATTTTAC 57.354 29.630 21.47 0.00 0.00 2.01
79 80 7.906327 ACTTTATGCACCATGGAAATTTTACT 58.094 30.769 21.47 0.00 0.00 2.24
80 81 8.374743 ACTTTATGCACCATGGAAATTTTACTT 58.625 29.630 21.47 0.00 0.00 2.24
81 82 9.218440 CTTTATGCACCATGGAAATTTTACTTT 57.782 29.630 21.47 0.00 0.00 2.66
82 83 8.545229 TTATGCACCATGGAAATTTTACTTTG 57.455 30.769 21.47 2.12 0.00 2.77
83 84 5.923204 TGCACCATGGAAATTTTACTTTGT 58.077 33.333 21.47 0.00 0.00 2.83
84 85 5.757320 TGCACCATGGAAATTTTACTTTGTG 59.243 36.000 21.47 1.40 0.00 3.33
85 86 5.757808 GCACCATGGAAATTTTACTTTGTGT 59.242 36.000 21.47 0.00 0.00 3.72
86 87 6.926272 GCACCATGGAAATTTTACTTTGTGTA 59.074 34.615 21.47 0.00 0.00 2.90
87 88 7.602265 GCACCATGGAAATTTTACTTTGTGTAT 59.398 33.333 21.47 0.00 0.00 2.29
88 89 8.924691 CACCATGGAAATTTTACTTTGTGTATG 58.075 33.333 21.47 0.00 0.00 2.39
89 90 8.865090 ACCATGGAAATTTTACTTTGTGTATGA 58.135 29.630 21.47 0.00 0.00 2.15
90 91 9.874205 CCATGGAAATTTTACTTTGTGTATGAT 57.126 29.630 5.56 0.00 0.00 2.45
92 93 9.874205 ATGGAAATTTTACTTTGTGTATGATGG 57.126 29.630 0.00 0.00 0.00 3.51
93 94 9.083422 TGGAAATTTTACTTTGTGTATGATGGA 57.917 29.630 0.00 0.00 0.00 3.41
94 95 9.921637 GGAAATTTTACTTTGTGTATGATGGAA 57.078 29.630 0.00 0.00 0.00 3.53
97 98 8.986477 ATTTTACTTTGTGTATGATGGAAAGC 57.014 30.769 0.00 0.00 0.00 3.51
98 99 7.759489 TTTACTTTGTGTATGATGGAAAGCT 57.241 32.000 0.00 0.00 0.00 3.74
99 100 7.759489 TTACTTTGTGTATGATGGAAAGCTT 57.241 32.000 0.00 0.00 0.00 3.74
100 101 6.259550 ACTTTGTGTATGATGGAAAGCTTC 57.740 37.500 0.00 0.00 0.00 3.86
101 102 5.769662 ACTTTGTGTATGATGGAAAGCTTCA 59.230 36.000 0.00 0.00 0.00 3.02
102 103 6.435277 ACTTTGTGTATGATGGAAAGCTTCAT 59.565 34.615 0.00 0.00 34.60 2.57
103 104 6.839124 TTGTGTATGATGGAAAGCTTCATT 57.161 33.333 0.00 0.00 32.58 2.57
104 105 6.839124 TGTGTATGATGGAAAGCTTCATTT 57.161 33.333 0.00 0.00 32.58 2.32
105 106 7.230849 TGTGTATGATGGAAAGCTTCATTTT 57.769 32.000 0.00 0.00 32.58 1.82
106 107 7.669427 TGTGTATGATGGAAAGCTTCATTTTT 58.331 30.769 0.00 0.00 32.58 1.94
134 135 9.696917 AATCATGTCAACTTTATTTTTCTGACC 57.303 29.630 0.00 0.00 33.78 4.02
135 136 8.231692 TCATGTCAACTTTATTTTTCTGACCA 57.768 30.769 0.00 0.00 33.78 4.02
136 137 8.859090 TCATGTCAACTTTATTTTTCTGACCAT 58.141 29.630 0.00 0.00 33.78 3.55
137 138 8.918658 CATGTCAACTTTATTTTTCTGACCATG 58.081 33.333 0.00 0.00 33.78 3.66
138 139 7.432869 TGTCAACTTTATTTTTCTGACCATGG 58.567 34.615 11.19 11.19 33.78 3.66
139 140 6.366061 GTCAACTTTATTTTTCTGACCATGGC 59.634 38.462 13.04 5.35 0.00 4.40
140 141 6.041409 TCAACTTTATTTTTCTGACCATGGCA 59.959 34.615 13.04 10.18 0.00 4.92
141 142 6.418057 ACTTTATTTTTCTGACCATGGCAA 57.582 33.333 13.04 0.00 0.00 4.52
142 143 6.825610 ACTTTATTTTTCTGACCATGGCAAA 58.174 32.000 13.04 3.09 0.00 3.68
143 144 7.452562 ACTTTATTTTTCTGACCATGGCAAAT 58.547 30.769 13.04 9.72 0.00 2.32
144 145 7.938490 ACTTTATTTTTCTGACCATGGCAAATT 59.062 29.630 13.04 0.00 0.00 1.82
145 146 8.688747 TTTATTTTTCTGACCATGGCAAATTT 57.311 26.923 13.04 0.00 0.00 1.82
146 147 8.688747 TTATTTTTCTGACCATGGCAAATTTT 57.311 26.923 13.04 0.00 0.00 1.82
147 148 9.784531 TTATTTTTCTGACCATGGCAAATTTTA 57.215 25.926 13.04 0.00 0.00 1.52
148 149 8.866970 ATTTTTCTGACCATGGCAAATTTTAT 57.133 26.923 13.04 0.00 0.00 1.40
149 150 8.688747 TTTTTCTGACCATGGCAAATTTTATT 57.311 26.923 13.04 0.00 0.00 1.40
150 151 9.784531 TTTTTCTGACCATGGCAAATTTTATTA 57.215 25.926 13.04 0.00 0.00 0.98
151 152 9.956640 TTTTCTGACCATGGCAAATTTTATTAT 57.043 25.926 13.04 0.00 0.00 1.28
152 153 9.956640 TTTCTGACCATGGCAAATTTTATTATT 57.043 25.926 13.04 0.00 0.00 1.40
153 154 9.956640 TTCTGACCATGGCAAATTTTATTATTT 57.043 25.926 13.04 0.00 0.00 1.40
154 155 9.956640 TCTGACCATGGCAAATTTTATTATTTT 57.043 25.926 13.04 0.00 0.00 1.82
201 202 8.837099 AAGACCATGACAAATTTATATTGGGA 57.163 30.769 0.00 0.00 32.02 4.37
202 203 8.237811 AGACCATGACAAATTTATATTGGGAC 57.762 34.615 0.00 7.19 32.02 4.46
203 204 8.061304 AGACCATGACAAATTTATATTGGGACT 58.939 33.333 0.00 8.64 32.02 3.85
204 205 8.608185 ACCATGACAAATTTATATTGGGACTT 57.392 30.769 0.00 0.00 32.02 3.01
205 206 9.045745 ACCATGACAAATTTATATTGGGACTTT 57.954 29.630 0.00 0.00 32.02 2.66
206 207 9.316730 CCATGACAAATTTATATTGGGACTTTG 57.683 33.333 0.00 0.00 32.02 2.77
207 208 9.316730 CATGACAAATTTATATTGGGACTTTGG 57.683 33.333 0.00 0.00 32.02 3.28
208 209 7.327214 TGACAAATTTATATTGGGACTTTGGC 58.673 34.615 0.00 0.00 32.17 4.52
209 210 7.038729 TGACAAATTTATATTGGGACTTTGGCA 60.039 33.333 0.00 0.00 37.69 4.92
210 211 7.684529 ACAAATTTATATTGGGACTTTGGCAA 58.315 30.769 0.00 0.00 32.02 4.52
211 212 7.823799 ACAAATTTATATTGGGACTTTGGCAAG 59.176 33.333 0.00 0.00 32.57 4.01
212 213 7.494922 AATTTATATTGGGACTTTGGCAAGT 57.505 32.000 0.00 0.77 46.64 3.16
213 214 6.926630 TTTATATTGGGACTTTGGCAAGTT 57.073 33.333 0.00 0.00 43.79 2.66
214 215 6.926630 TTATATTGGGACTTTGGCAAGTTT 57.073 33.333 0.00 0.00 43.79 2.66
215 216 3.751479 ATTGGGACTTTGGCAAGTTTC 57.249 42.857 0.00 0.00 43.79 2.78
216 217 2.452600 TGGGACTTTGGCAAGTTTCT 57.547 45.000 0.00 0.00 43.79 2.52
217 218 2.745968 TGGGACTTTGGCAAGTTTCTT 58.254 42.857 0.00 0.00 43.79 2.52
218 219 3.103742 TGGGACTTTGGCAAGTTTCTTT 58.896 40.909 0.00 0.00 43.79 2.52
219 220 3.517500 TGGGACTTTGGCAAGTTTCTTTT 59.482 39.130 0.00 0.00 43.79 2.27
220 221 4.019771 TGGGACTTTGGCAAGTTTCTTTTT 60.020 37.500 0.00 0.00 43.79 1.94
221 222 5.187967 TGGGACTTTGGCAAGTTTCTTTTTA 59.812 36.000 0.00 0.00 43.79 1.52
222 223 6.126911 TGGGACTTTGGCAAGTTTCTTTTTAT 60.127 34.615 0.00 0.00 43.79 1.40
223 224 6.765989 GGGACTTTGGCAAGTTTCTTTTTATT 59.234 34.615 0.00 0.00 43.79 1.40
224 225 7.929245 GGGACTTTGGCAAGTTTCTTTTTATTA 59.071 33.333 0.00 0.00 43.79 0.98
225 226 9.320352 GGACTTTGGCAAGTTTCTTTTTATTAA 57.680 29.630 0.00 0.00 43.79 1.40
228 229 9.929722 CTTTGGCAAGTTTCTTTTTATTAAACC 57.070 29.630 0.00 0.00 34.39 3.27
229 230 9.449719 TTTGGCAAGTTTCTTTTTATTAAACCA 57.550 25.926 0.00 0.00 34.39 3.67
230 231 9.620259 TTGGCAAGTTTCTTTTTATTAAACCAT 57.380 25.926 0.00 0.00 34.39 3.55
231 232 9.050601 TGGCAAGTTTCTTTTTATTAAACCATG 57.949 29.630 0.00 0.00 34.39 3.66
232 233 8.503196 GGCAAGTTTCTTTTTATTAAACCATGG 58.497 33.333 11.19 11.19 34.39 3.66
233 234 9.267084 GCAAGTTTCTTTTTATTAAACCATGGA 57.733 29.630 21.47 0.00 34.39 3.41
249 250 7.703058 AACCATGGATTTTCTTACTAGTTGG 57.297 36.000 21.47 0.00 0.00 3.77
250 251 7.027874 ACCATGGATTTTCTTACTAGTTGGA 57.972 36.000 21.47 0.00 0.00 3.53
251 252 6.884836 ACCATGGATTTTCTTACTAGTTGGAC 59.115 38.462 21.47 0.00 0.00 4.02
252 253 6.318900 CCATGGATTTTCTTACTAGTTGGACC 59.681 42.308 5.56 0.00 0.00 4.46
253 254 5.484715 TGGATTTTCTTACTAGTTGGACCG 58.515 41.667 0.00 0.00 0.00 4.79
254 255 5.012354 TGGATTTTCTTACTAGTTGGACCGT 59.988 40.000 0.00 0.00 0.00 4.83
255 256 5.350640 GGATTTTCTTACTAGTTGGACCGTG 59.649 44.000 0.00 0.00 0.00 4.94
256 257 3.947910 TTCTTACTAGTTGGACCGTGG 57.052 47.619 0.00 0.00 0.00 4.94
257 258 1.547372 TCTTACTAGTTGGACCGTGGC 59.453 52.381 0.00 0.00 0.00 5.01
258 259 0.609662 TTACTAGTTGGACCGTGGCC 59.390 55.000 0.00 0.00 0.00 5.36
259 260 0.542467 TACTAGTTGGACCGTGGCCA 60.542 55.000 0.00 0.00 0.00 5.36
260 261 1.198759 ACTAGTTGGACCGTGGCCAT 61.199 55.000 9.72 0.00 34.90 4.40
261 262 0.035439 CTAGTTGGACCGTGGCCATT 60.035 55.000 9.72 0.00 34.90 3.16
262 263 0.402504 TAGTTGGACCGTGGCCATTT 59.597 50.000 9.72 0.00 34.90 2.32
263 264 0.469144 AGTTGGACCGTGGCCATTTT 60.469 50.000 9.72 0.00 34.90 1.82
264 265 1.202952 AGTTGGACCGTGGCCATTTTA 60.203 47.619 9.72 0.00 34.90 1.52
265 266 1.822371 GTTGGACCGTGGCCATTTTAT 59.178 47.619 9.72 0.00 34.90 1.40
266 267 2.223803 TGGACCGTGGCCATTTTATT 57.776 45.000 9.72 0.00 0.00 1.40
267 268 2.530701 TGGACCGTGGCCATTTTATTT 58.469 42.857 9.72 0.00 0.00 1.40
268 269 2.900546 TGGACCGTGGCCATTTTATTTT 59.099 40.909 9.72 0.00 0.00 1.82
269 270 3.325135 TGGACCGTGGCCATTTTATTTTT 59.675 39.130 9.72 0.00 0.00 1.94
270 271 4.527038 TGGACCGTGGCCATTTTATTTTTA 59.473 37.500 9.72 0.00 0.00 1.52
271 272 5.106442 GGACCGTGGCCATTTTATTTTTAG 58.894 41.667 9.72 0.00 0.00 1.85
272 273 5.105675 GGACCGTGGCCATTTTATTTTTAGA 60.106 40.000 9.72 0.00 0.00 2.10
273 274 5.716094 ACCGTGGCCATTTTATTTTTAGAC 58.284 37.500 9.72 0.00 0.00 2.59
274 275 5.106442 CCGTGGCCATTTTATTTTTAGACC 58.894 41.667 9.72 0.00 0.00 3.85
275 276 5.336849 CCGTGGCCATTTTATTTTTAGACCA 60.337 40.000 9.72 0.00 0.00 4.02
276 277 6.337356 CGTGGCCATTTTATTTTTAGACCAT 58.663 36.000 9.72 0.00 0.00 3.55
277 278 6.255453 CGTGGCCATTTTATTTTTAGACCATG 59.745 38.462 9.72 0.00 0.00 3.66
278 279 6.538381 GTGGCCATTTTATTTTTAGACCATGG 59.462 38.462 9.72 11.19 34.23 3.66
279 280 6.603237 GCCATTTTATTTTTAGACCATGGC 57.397 37.500 13.04 4.70 46.37 4.40
294 295 7.844493 AGACCATGGCATATTTATTTCATGT 57.156 32.000 13.04 0.00 32.56 3.21
295 296 8.938801 AGACCATGGCATATTTATTTCATGTA 57.061 30.769 13.04 0.00 32.56 2.29
296 297 9.537852 AGACCATGGCATATTTATTTCATGTAT 57.462 29.630 13.04 0.00 32.56 2.29
297 298 9.577110 GACCATGGCATATTTATTTCATGTATG 57.423 33.333 13.04 0.00 32.56 2.39
298 299 9.311676 ACCATGGCATATTTATTTCATGTATGA 57.688 29.630 13.04 0.00 32.56 2.15
302 303 8.252417 TGGCATATTTATTTCATGTATGATGGC 58.748 33.333 0.00 0.00 36.56 4.40
303 304 8.252417 GGCATATTTATTTCATGTATGATGGCA 58.748 33.333 0.00 0.00 36.56 4.92
304 305 9.642327 GCATATTTATTTCATGTATGATGGCAA 57.358 29.630 0.00 0.00 36.56 4.52
357 358 7.610580 TTTTGTCTAACCATGGAAAAATCCT 57.389 32.000 21.47 0.00 0.00 3.24
358 359 7.610580 TTTGTCTAACCATGGAAAAATCCTT 57.389 32.000 21.47 1.50 0.00 3.36
359 360 7.610580 TTGTCTAACCATGGAAAAATCCTTT 57.389 32.000 21.47 0.68 0.00 3.11
360 361 7.610580 TGTCTAACCATGGAAAAATCCTTTT 57.389 32.000 21.47 0.00 37.46 2.27
361 362 8.028652 TGTCTAACCATGGAAAAATCCTTTTT 57.971 30.769 21.47 0.00 44.93 1.94
362 363 7.930865 TGTCTAACCATGGAAAAATCCTTTTTG 59.069 33.333 21.47 0.00 42.51 2.44
363 364 8.147704 GTCTAACCATGGAAAAATCCTTTTTGA 58.852 33.333 21.47 1.60 42.51 2.69
364 365 8.709308 TCTAACCATGGAAAAATCCTTTTTGAA 58.291 29.630 21.47 0.00 42.51 2.69
365 366 7.566760 AACCATGGAAAAATCCTTTTTGAAC 57.433 32.000 21.47 0.00 42.51 3.18
366 367 6.657875 ACCATGGAAAAATCCTTTTTGAACA 58.342 32.000 21.47 0.87 42.51 3.18
367 368 7.289310 ACCATGGAAAAATCCTTTTTGAACAT 58.711 30.769 21.47 2.80 42.51 2.71
368 369 7.229106 ACCATGGAAAAATCCTTTTTGAACATG 59.771 33.333 21.47 16.87 42.51 3.21
369 370 7.308710 CCATGGAAAAATCCTTTTTGAACATGG 60.309 37.037 22.18 22.18 45.92 3.66
370 371 6.893583 TGGAAAAATCCTTTTTGAACATGGA 58.106 32.000 0.00 0.00 42.51 3.41
371 372 7.341805 TGGAAAAATCCTTTTTGAACATGGAA 58.658 30.769 0.00 0.00 42.51 3.53
372 373 7.831193 TGGAAAAATCCTTTTTGAACATGGAAA 59.169 29.630 0.00 0.00 42.51 3.13
373 374 8.681806 GGAAAAATCCTTTTTGAACATGGAAAA 58.318 29.630 0.00 0.00 42.51 2.29
377 378 8.750515 AATCCTTTTTGAACATGGAAAATTGT 57.249 26.923 0.00 0.00 0.00 2.71
378 379 9.844257 AATCCTTTTTGAACATGGAAAATTGTA 57.156 25.926 0.00 0.00 0.00 2.41
417 418 5.708877 AAAAATTGGACCATGGCATTTTG 57.291 34.783 13.04 0.00 29.56 2.44
418 419 4.370094 AAATTGGACCATGGCATTTTGT 57.630 36.364 13.04 0.00 0.00 2.83
419 420 5.495926 AAATTGGACCATGGCATTTTGTA 57.504 34.783 13.04 0.00 0.00 2.41
420 421 3.951775 TTGGACCATGGCATTTTGTAC 57.048 42.857 13.04 0.00 0.00 2.90
421 422 3.168035 TGGACCATGGCATTTTGTACT 57.832 42.857 13.04 0.00 0.00 2.73
422 423 4.308526 TGGACCATGGCATTTTGTACTA 57.691 40.909 13.04 0.00 0.00 1.82
423 424 4.269183 TGGACCATGGCATTTTGTACTAG 58.731 43.478 13.04 0.00 0.00 2.57
424 425 4.263727 TGGACCATGGCATTTTGTACTAGT 60.264 41.667 13.04 0.00 0.00 2.57
425 426 4.705023 GGACCATGGCATTTTGTACTAGTT 59.295 41.667 13.04 0.00 0.00 2.24
426 427 5.185056 GGACCATGGCATTTTGTACTAGTTT 59.815 40.000 13.04 0.00 0.00 2.66
427 428 6.024552 ACCATGGCATTTTGTACTAGTTTG 57.975 37.500 13.04 0.00 0.00 2.93
428 429 5.772672 ACCATGGCATTTTGTACTAGTTTGA 59.227 36.000 13.04 0.00 0.00 2.69
429 430 6.092748 CCATGGCATTTTGTACTAGTTTGAC 58.907 40.000 0.00 0.00 0.00 3.18
430 431 5.699097 TGGCATTTTGTACTAGTTTGACC 57.301 39.130 0.00 0.00 0.00 4.02
431 432 5.133941 TGGCATTTTGTACTAGTTTGACCA 58.866 37.500 0.00 0.00 0.00 4.02
432 433 5.772672 TGGCATTTTGTACTAGTTTGACCAT 59.227 36.000 0.00 0.00 0.00 3.55
433 434 6.092748 GGCATTTTGTACTAGTTTGACCATG 58.907 40.000 0.00 0.00 0.00 3.66
434 435 6.092748 GCATTTTGTACTAGTTTGACCATGG 58.907 40.000 11.19 11.19 0.00 3.66
435 436 6.294508 GCATTTTGTACTAGTTTGACCATGGT 60.295 38.462 19.89 19.89 0.00 3.55
436 437 6.870971 TTTTGTACTAGTTTGACCATGGTC 57.129 37.500 33.97 33.97 44.77 4.02
452 453 6.916440 ACCATGGTCGTTTTATTTTTAGACC 58.084 36.000 13.00 5.57 45.95 3.85
458 459 7.586747 GGTCGTTTTATTTTTAGACCATGTCA 58.413 34.615 7.47 0.00 45.30 3.58
459 460 8.077386 GGTCGTTTTATTTTTAGACCATGTCAA 58.923 33.333 7.47 0.00 45.30 3.18
460 461 9.113876 GTCGTTTTATTTTTAGACCATGTCAAG 57.886 33.333 0.00 0.00 34.60 3.02
461 462 8.842280 TCGTTTTATTTTTAGACCATGTCAAGT 58.158 29.630 0.00 0.00 34.60 3.16
462 463 9.458374 CGTTTTATTTTTAGACCATGTCAAGTT 57.542 29.630 0.00 0.00 34.60 2.66
469 470 9.672086 TTTTTAGACCATGTCAAGTTTAATTCG 57.328 29.630 0.00 0.00 34.60 3.34
470 471 7.972832 TTAGACCATGTCAAGTTTAATTCGT 57.027 32.000 0.00 0.00 34.60 3.85
471 472 6.241207 AGACCATGTCAAGTTTAATTCGTG 57.759 37.500 0.00 0.00 34.60 4.35
472 473 5.763204 AGACCATGTCAAGTTTAATTCGTGT 59.237 36.000 0.00 0.00 34.60 4.49
473 474 6.932400 AGACCATGTCAAGTTTAATTCGTGTA 59.068 34.615 0.00 0.00 34.60 2.90
474 475 6.894828 ACCATGTCAAGTTTAATTCGTGTAC 58.105 36.000 0.00 0.00 0.00 2.90
475 476 6.013085 CCATGTCAAGTTTAATTCGTGTACG 58.987 40.000 0.00 0.00 41.45 3.67
489 490 5.351233 TCGTGTACGATTGCAAATTTCTT 57.649 34.783 1.71 0.00 44.22 2.52
490 491 5.753744 TCGTGTACGATTGCAAATTTCTTT 58.246 33.333 1.71 0.00 44.22 2.52
491 492 6.202937 TCGTGTACGATTGCAAATTTCTTTT 58.797 32.000 1.71 0.00 44.22 2.27
492 493 6.693545 TCGTGTACGATTGCAAATTTCTTTTT 59.306 30.769 1.71 0.00 44.22 1.94
493 494 6.995633 CGTGTACGATTGCAAATTTCTTTTTC 59.004 34.615 1.71 0.00 43.02 2.29
494 495 7.096640 CGTGTACGATTGCAAATTTCTTTTTCT 60.097 33.333 1.71 0.00 43.02 2.52
495 496 9.176181 GTGTACGATTGCAAATTTCTTTTTCTA 57.824 29.630 1.71 0.00 0.00 2.10
496 497 9.393249 TGTACGATTGCAAATTTCTTTTTCTAG 57.607 29.630 1.71 0.00 0.00 2.43
497 498 9.607285 GTACGATTGCAAATTTCTTTTTCTAGA 57.393 29.630 1.71 0.00 0.00 2.43
499 500 9.346725 ACGATTGCAAATTTCTTTTTCTAGATC 57.653 29.630 1.71 0.00 0.00 2.75
500 501 9.345517 CGATTGCAAATTTCTTTTTCTAGATCA 57.654 29.630 1.71 0.00 0.00 2.92
503 504 9.985730 TTGCAAATTTCTTTTTCTAGATCATGT 57.014 25.926 0.00 0.00 0.00 3.21
504 505 9.630098 TGCAAATTTCTTTTTCTAGATCATGTC 57.370 29.630 0.00 0.00 0.00 3.06
505 506 9.630098 GCAAATTTCTTTTTCTAGATCATGTCA 57.370 29.630 0.00 0.00 0.00 3.58
544 545 9.191479 TCTGACCTTGGTAAATTTTACTTTTCA 57.809 29.630 16.64 11.65 0.00 2.69
545 546 9.810545 CTGACCTTGGTAAATTTTACTTTTCAA 57.189 29.630 16.64 11.75 0.00 2.69
546 547 9.589111 TGACCTTGGTAAATTTTACTTTTCAAC 57.411 29.630 16.64 2.07 0.00 3.18
547 548 9.589111 GACCTTGGTAAATTTTACTTTTCAACA 57.411 29.630 16.64 4.29 0.00 3.33
550 551 9.862585 CTTGGTAAATTTTACTTTTCAACATGC 57.137 29.630 16.64 0.00 0.00 4.06
551 552 8.371770 TGGTAAATTTTACTTTTCAACATGCC 57.628 30.769 16.64 0.00 0.00 4.40
552 553 7.987458 TGGTAAATTTTACTTTTCAACATGCCA 59.013 29.630 16.64 1.88 0.00 4.92
553 554 8.831550 GGTAAATTTTACTTTTCAACATGCCAA 58.168 29.630 16.64 0.00 0.00 4.52
562 563 8.449251 ACTTTTCAACATGCCAAATTTTATGT 57.551 26.923 0.00 6.64 35.43 2.29
563 564 8.901793 ACTTTTCAACATGCCAAATTTTATGTT 58.098 25.926 14.70 14.70 42.61 2.71
564 565 9.384682 CTTTTCAACATGCCAAATTTTATGTTC 57.615 29.630 16.43 0.00 40.62 3.18
565 566 7.432350 TTCAACATGCCAAATTTTATGTTCC 57.568 32.000 16.43 0.00 40.62 3.62
566 567 5.636965 TCAACATGCCAAATTTTATGTTCCG 59.363 36.000 16.43 10.41 40.62 4.30
567 568 5.398603 ACATGCCAAATTTTATGTTCCGA 57.601 34.783 0.00 0.00 30.05 4.55
568 569 5.167845 ACATGCCAAATTTTATGTTCCGAC 58.832 37.500 0.00 0.00 30.05 4.79
569 570 4.181309 TGCCAAATTTTATGTTCCGACC 57.819 40.909 0.00 0.00 0.00 4.79
570 571 3.574396 TGCCAAATTTTATGTTCCGACCA 59.426 39.130 0.00 0.00 0.00 4.02
571 572 4.221703 TGCCAAATTTTATGTTCCGACCAT 59.778 37.500 0.00 0.00 0.00 3.55
572 573 4.566360 GCCAAATTTTATGTTCCGACCATG 59.434 41.667 0.00 0.00 0.00 3.66
573 574 5.108517 CCAAATTTTATGTTCCGACCATGG 58.891 41.667 11.19 11.19 0.00 3.66
574 575 4.385358 AATTTTATGTTCCGACCATGGC 57.615 40.909 13.04 3.65 0.00 4.40
575 576 2.498644 TTTATGTTCCGACCATGGCA 57.501 45.000 13.04 0.00 0.00 4.92
576 577 2.498644 TTATGTTCCGACCATGGCAA 57.501 45.000 13.04 0.00 0.00 4.52
577 578 2.727123 TATGTTCCGACCATGGCAAT 57.273 45.000 13.04 0.00 0.00 3.56
578 579 1.851304 ATGTTCCGACCATGGCAATT 58.149 45.000 13.04 0.00 0.00 2.32
579 580 1.626686 TGTTCCGACCATGGCAATTT 58.373 45.000 13.04 0.00 0.00 1.82
580 581 1.967066 TGTTCCGACCATGGCAATTTT 59.033 42.857 13.04 0.00 0.00 1.82
581 582 2.366916 TGTTCCGACCATGGCAATTTTT 59.633 40.909 13.04 0.00 0.00 1.94
618 619 8.207521 ACCATGGAAATTTTATATTTTTGCCG 57.792 30.769 21.47 0.00 0.00 5.69
654 655 6.696411 CCATGGCAACTTTGGTTCTTTAATA 58.304 36.000 0.00 0.00 36.27 0.98
655 656 7.158021 CCATGGCAACTTTGGTTCTTTAATAA 58.842 34.615 0.00 0.00 36.27 1.40
696 697 6.707440 TTTGTTTTTCTTAGATGTGGCAGA 57.293 33.333 0.00 0.00 0.00 4.26
700 701 7.370383 TGTTTTTCTTAGATGTGGCAGATTTC 58.630 34.615 0.00 0.00 0.00 2.17
702 703 6.748333 TTTCTTAGATGTGGCAGATTTCTG 57.252 37.500 0.00 3.13 46.40 3.02
768 773 4.344865 TTGGCCGAGGGTGGAAGC 62.345 66.667 0.00 0.00 0.00 3.86
776 781 1.527433 GAGGGTGGAAGCTGGCAAAC 61.527 60.000 0.00 0.00 0.00 2.93
825 830 0.036765 AGCGAAAATACAGCCGACCA 60.037 50.000 0.00 0.00 0.00 4.02
843 848 1.263776 CATGCGAGTGAAGTCGAGAC 58.736 55.000 11.60 0.00 42.85 3.36
893 904 5.655974 TGAATTTGAAATGCCACCATAGCTA 59.344 36.000 0.00 0.00 0.00 3.32
895 906 2.575532 TGAAATGCCACCATAGCTAGC 58.424 47.619 6.62 6.62 0.00 3.42
896 907 2.173356 TGAAATGCCACCATAGCTAGCT 59.827 45.455 23.12 23.12 0.00 3.32
898 909 2.267174 ATGCCACCATAGCTAGCTTG 57.733 50.000 24.88 19.17 0.00 4.01
899 910 0.911769 TGCCACCATAGCTAGCTTGT 59.088 50.000 24.88 14.97 0.00 3.16
901 912 1.811941 GCCACCATAGCTAGCTTGTCC 60.812 57.143 24.88 4.58 0.00 4.02
902 913 1.765314 CCACCATAGCTAGCTTGTCCT 59.235 52.381 24.88 0.00 0.00 3.85
903 914 2.224161 CCACCATAGCTAGCTTGTCCTC 60.224 54.545 24.88 0.00 0.00 3.71
904 915 2.043227 ACCATAGCTAGCTTGTCCTCC 58.957 52.381 24.88 0.00 0.00 4.30
905 916 2.042464 CCATAGCTAGCTTGTCCTCCA 58.958 52.381 24.88 1.60 0.00 3.86
906 917 2.636893 CCATAGCTAGCTTGTCCTCCAT 59.363 50.000 24.88 4.37 0.00 3.41
907 918 3.072184 CCATAGCTAGCTTGTCCTCCATT 59.928 47.826 24.88 0.00 0.00 3.16
908 919 4.284490 CCATAGCTAGCTTGTCCTCCATTA 59.716 45.833 24.88 0.00 0.00 1.90
925 936 2.847366 TTAATTCCCCACCAGCCGCC 62.847 60.000 0.00 0.00 0.00 6.13
948 959 6.317391 GCCTACGTAGTTAAGACTTAAGAGGA 59.683 42.308 20.73 0.00 37.78 3.71
956 967 0.533032 GACTTAAGAGGAGCAGCCGT 59.467 55.000 10.09 0.00 43.43 5.68
963 974 0.744874 GAGGAGCAGCCGTGTATGTA 59.255 55.000 0.00 0.00 43.43 2.29
1020 1037 4.443266 GCGGAGGAACAGCGAGCT 62.443 66.667 0.00 0.00 0.00 4.09
1095 1112 0.731514 TCGTCTTGTTCATCGTCGGC 60.732 55.000 0.00 0.00 0.00 5.54
1117 1134 1.959899 ATGCGCGCTCTTCTTGTTCG 61.960 55.000 33.29 0.00 0.00 3.95
1159 1182 1.753078 ATCGAGTACGCCTGCCTCA 60.753 57.895 0.00 0.00 39.58 3.86
1229 1255 1.227527 TGGTGGTGCAGACTGTTCG 60.228 57.895 3.99 0.00 0.00 3.95
1623 1661 4.651008 TCGGACGCGGTGTTCACC 62.651 66.667 12.47 11.53 0.00 4.02
1669 1707 4.992511 GGTACGCCGGCCACAACA 62.993 66.667 23.46 0.00 0.00 3.33
1780 1818 2.997315 CGCTGGACCTCCTGGACA 60.997 66.667 0.00 0.00 35.73 4.02
2103 2141 2.280119 GGCGCGACCTATGATGCA 60.280 61.111 12.10 0.00 34.51 3.96
2296 2334 4.351054 AGTTCAGGGCCGCCAAGG 62.351 66.667 12.58 0.00 44.97 3.61
2297 2335 4.344865 GTTCAGGGCCGCCAAGGA 62.345 66.667 12.58 2.06 45.00 3.36
2298 2336 4.033776 TTCAGGGCCGCCAAGGAG 62.034 66.667 12.58 0.00 45.00 3.69
2300 2338 4.033776 CAGGGCCGCCAAGGAGAA 62.034 66.667 12.58 0.00 45.00 2.87
2301 2339 3.256960 AGGGCCGCCAAGGAGAAA 61.257 61.111 12.58 0.00 45.00 2.52
2302 2340 2.043953 GGGCCGCCAAGGAGAAAT 60.044 61.111 12.58 0.00 45.00 2.17
2303 2341 2.418083 GGGCCGCCAAGGAGAAATG 61.418 63.158 12.58 0.00 45.00 2.32
2304 2342 1.378514 GGCCGCCAAGGAGAAATGA 60.379 57.895 3.91 0.00 45.00 2.57
2305 2343 0.753111 GGCCGCCAAGGAGAAATGAT 60.753 55.000 3.91 0.00 45.00 2.45
2306 2344 0.383231 GCCGCCAAGGAGAAATGATG 59.617 55.000 0.00 0.00 45.00 3.07
2307 2345 1.755179 CCGCCAAGGAGAAATGATGT 58.245 50.000 0.00 0.00 45.00 3.06
2308 2346 2.094675 CCGCCAAGGAGAAATGATGTT 58.905 47.619 0.00 0.00 45.00 2.71
2309 2347 2.098117 CCGCCAAGGAGAAATGATGTTC 59.902 50.000 0.00 0.00 45.00 3.18
2310 2348 3.012518 CGCCAAGGAGAAATGATGTTCT 58.987 45.455 0.00 0.00 40.62 3.01
2311 2349 4.191544 CGCCAAGGAGAAATGATGTTCTA 58.808 43.478 0.00 0.00 37.98 2.10
2312 2350 4.034510 CGCCAAGGAGAAATGATGTTCTAC 59.965 45.833 0.00 0.00 37.98 2.59
2313 2351 4.336713 GCCAAGGAGAAATGATGTTCTACC 59.663 45.833 0.00 0.00 39.02 3.18
2314 2352 5.500234 CCAAGGAGAAATGATGTTCTACCA 58.500 41.667 0.00 0.00 39.02 3.25
2315 2353 6.125029 CCAAGGAGAAATGATGTTCTACCAT 58.875 40.000 0.00 0.00 39.02 3.55
2316 2354 6.039047 CCAAGGAGAAATGATGTTCTACCATG 59.961 42.308 0.00 0.00 39.02 3.66
2317 2355 5.128919 AGGAGAAATGATGTTCTACCATGC 58.871 41.667 0.00 0.00 39.02 4.06
2318 2356 4.276926 GGAGAAATGATGTTCTACCATGCC 59.723 45.833 0.00 0.00 37.98 4.40
2319 2357 3.879295 AGAAATGATGTTCTACCATGCCG 59.121 43.478 0.00 0.00 36.06 5.69
2320 2358 2.260844 ATGATGTTCTACCATGCCGG 57.739 50.000 0.00 0.00 42.50 6.13
2321 2359 0.180171 TGATGTTCTACCATGCCGGG 59.820 55.000 2.18 0.00 40.22 5.73
2322 2360 0.468226 GATGTTCTACCATGCCGGGA 59.532 55.000 2.18 0.00 40.22 5.14
2323 2361 1.072331 GATGTTCTACCATGCCGGGAT 59.928 52.381 0.92 0.92 40.22 3.85
2324 2362 1.796017 TGTTCTACCATGCCGGGATA 58.204 50.000 8.65 0.00 40.22 2.59
2325 2363 2.334977 TGTTCTACCATGCCGGGATAT 58.665 47.619 8.65 2.19 40.22 1.63
2326 2364 2.301870 TGTTCTACCATGCCGGGATATC 59.698 50.000 8.65 0.00 40.22 1.63
2327 2365 1.568504 TCTACCATGCCGGGATATCC 58.431 55.000 13.87 13.87 40.22 2.59
2336 2374 4.722193 GGGATATCCGGTGCATGG 57.278 61.111 15.69 1.64 36.71 3.66
2337 2375 1.675641 GGGATATCCGGTGCATGGC 60.676 63.158 15.69 0.00 36.71 4.40
2338 2376 1.376466 GGATATCCGGTGCATGGCT 59.624 57.895 5.86 0.00 0.00 4.75
2339 2377 0.613260 GGATATCCGGTGCATGGCTA 59.387 55.000 5.86 0.00 0.00 3.93
2340 2378 1.003118 GGATATCCGGTGCATGGCTAA 59.997 52.381 5.86 0.00 0.00 3.09
2341 2379 2.350522 GATATCCGGTGCATGGCTAAG 58.649 52.381 0.00 0.00 0.00 2.18
2342 2380 0.250295 TATCCGGTGCATGGCTAAGC 60.250 55.000 0.00 0.00 0.00 3.09
2371 2409 6.895898 CATTTCTTGGAGATTCGGATACATG 58.104 40.000 0.00 0.00 0.00 3.21
2372 2410 3.995199 TCTTGGAGATTCGGATACATGC 58.005 45.455 0.00 0.00 0.00 4.06
2373 2411 3.387699 TCTTGGAGATTCGGATACATGCA 59.612 43.478 0.00 0.00 0.00 3.96
2374 2412 3.836365 TGGAGATTCGGATACATGCAA 57.164 42.857 0.00 0.00 0.00 4.08
2375 2413 4.149511 TGGAGATTCGGATACATGCAAA 57.850 40.909 0.00 0.00 0.00 3.68
2376 2414 4.717877 TGGAGATTCGGATACATGCAAAT 58.282 39.130 0.00 0.00 0.00 2.32
2377 2415 4.756642 TGGAGATTCGGATACATGCAAATC 59.243 41.667 0.00 0.00 0.00 2.17
2378 2416 4.999950 GGAGATTCGGATACATGCAAATCT 59.000 41.667 5.85 5.85 36.46 2.40
2379 2417 5.106791 GGAGATTCGGATACATGCAAATCTG 60.107 44.000 10.01 9.36 34.52 2.90
2380 2418 4.758674 AGATTCGGATACATGCAAATCTGG 59.241 41.667 13.10 4.98 33.46 3.86
2381 2419 2.221169 TCGGATACATGCAAATCTGGC 58.779 47.619 13.10 0.00 0.00 4.85
2382 2420 1.267806 CGGATACATGCAAATCTGGCC 59.732 52.381 0.00 0.00 0.00 5.36
2383 2421 1.615392 GGATACATGCAAATCTGGCCC 59.385 52.381 0.00 0.00 0.00 5.80
2384 2422 1.267806 GATACATGCAAATCTGGCCCG 59.732 52.381 0.00 0.00 0.00 6.13
2385 2423 1.383456 TACATGCAAATCTGGCCCGC 61.383 55.000 0.00 0.00 0.00 6.13
2386 2424 2.043652 ATGCAAATCTGGCCCGCT 60.044 55.556 0.00 0.00 0.00 5.52
2387 2425 2.420568 ATGCAAATCTGGCCCGCTG 61.421 57.895 0.00 0.00 0.00 5.18
2388 2426 3.064324 GCAAATCTGGCCCGCTGT 61.064 61.111 0.00 0.00 0.00 4.40
2389 2427 1.748879 GCAAATCTGGCCCGCTGTA 60.749 57.895 0.00 0.00 0.00 2.74
2390 2428 1.103398 GCAAATCTGGCCCGCTGTAT 61.103 55.000 0.00 0.00 0.00 2.29
2391 2429 1.392589 CAAATCTGGCCCGCTGTATT 58.607 50.000 0.00 0.00 0.00 1.89
2392 2430 1.334869 CAAATCTGGCCCGCTGTATTC 59.665 52.381 0.00 0.00 0.00 1.75
2393 2431 0.546122 AATCTGGCCCGCTGTATTCA 59.454 50.000 0.00 0.00 0.00 2.57
2394 2432 0.179045 ATCTGGCCCGCTGTATTCAC 60.179 55.000 0.00 0.00 0.00 3.18
2395 2433 1.819632 CTGGCCCGCTGTATTCACC 60.820 63.158 0.00 0.00 0.00 4.02
2396 2434 2.257409 CTGGCCCGCTGTATTCACCT 62.257 60.000 0.00 0.00 0.00 4.00
2397 2435 1.077716 GGCCCGCTGTATTCACCTT 60.078 57.895 0.00 0.00 0.00 3.50
2398 2436 0.179468 GGCCCGCTGTATTCACCTTA 59.821 55.000 0.00 0.00 0.00 2.69
2399 2437 1.202770 GGCCCGCTGTATTCACCTTAT 60.203 52.381 0.00 0.00 0.00 1.73
2400 2438 2.038033 GGCCCGCTGTATTCACCTTATA 59.962 50.000 0.00 0.00 0.00 0.98
2401 2439 3.307480 GGCCCGCTGTATTCACCTTATAT 60.307 47.826 0.00 0.00 0.00 0.86
2402 2440 4.081309 GGCCCGCTGTATTCACCTTATATA 60.081 45.833 0.00 0.00 0.00 0.86
2403 2441 5.396436 GGCCCGCTGTATTCACCTTATATAT 60.396 44.000 0.00 0.00 0.00 0.86
2404 2442 6.113411 GCCCGCTGTATTCACCTTATATATT 58.887 40.000 0.00 0.00 0.00 1.28
2405 2443 6.037172 GCCCGCTGTATTCACCTTATATATTG 59.963 42.308 0.00 0.00 0.00 1.90
2406 2444 6.037172 CCCGCTGTATTCACCTTATATATTGC 59.963 42.308 0.00 0.00 0.00 3.56
2407 2445 6.037172 CCGCTGTATTCACCTTATATATTGCC 59.963 42.308 0.00 0.00 0.00 4.52
2408 2446 6.818644 CGCTGTATTCACCTTATATATTGCCT 59.181 38.462 0.00 0.00 0.00 4.75
2409 2447 7.979537 CGCTGTATTCACCTTATATATTGCCTA 59.020 37.037 0.00 0.00 0.00 3.93
2410 2448 9.838339 GCTGTATTCACCTTATATATTGCCTAT 57.162 33.333 0.00 0.00 0.00 2.57
2417 2455 9.685276 TCACCTTATATATTGCCTATCCAATTG 57.315 33.333 0.00 0.00 36.80 2.32
2418 2456 9.685276 CACCTTATATATTGCCTATCCAATTGA 57.315 33.333 7.12 0.00 36.80 2.57
2425 2463 6.713762 ATTGCCTATCCAATTGAATTTCGA 57.286 33.333 7.12 0.00 31.67 3.71
2426 2464 6.522625 TTGCCTATCCAATTGAATTTCGAA 57.477 33.333 7.12 0.00 0.00 3.71
2427 2465 6.522625 TGCCTATCCAATTGAATTTCGAAA 57.477 33.333 13.91 13.91 0.00 3.46
2428 2466 6.563422 TGCCTATCCAATTGAATTTCGAAAG 58.437 36.000 16.80 0.48 0.00 2.62
2429 2467 6.152661 TGCCTATCCAATTGAATTTCGAAAGT 59.847 34.615 16.80 14.13 0.00 2.66
2430 2468 6.473455 GCCTATCCAATTGAATTTCGAAAGTG 59.527 38.462 16.50 1.19 0.00 3.16
2431 2469 6.473455 CCTATCCAATTGAATTTCGAAAGTGC 59.527 38.462 16.50 7.92 0.00 4.40
2432 2470 5.452078 TCCAATTGAATTTCGAAAGTGCT 57.548 34.783 16.50 0.00 0.00 4.40
2510 2548 9.701098 CATGCAGCCACTTTATTAATTATTCAT 57.299 29.630 0.00 0.00 0.00 2.57
2630 2668 1.626825 TCTGGGCCTAGTACCAAACAC 59.373 52.381 16.69 0.00 36.09 3.32
2704 2742 2.814835 GGGTATGGGCCACCTACCG 61.815 68.421 23.61 0.00 39.48 4.02
2734 2772 0.895530 CTTCTCAACCAGGACGCCTA 59.104 55.000 0.00 0.00 29.64 3.93
2735 2773 1.275291 CTTCTCAACCAGGACGCCTAA 59.725 52.381 0.00 0.00 29.64 2.69
2880 2918 1.660355 GAGTCCATCTCCGCGCATA 59.340 57.895 8.75 0.00 37.22 3.14
2946 2984 1.134310 TCAATGAGTGAGATGCCGCAT 60.134 47.619 5.28 5.28 0.00 4.73
2959 2997 2.114670 CCGCATCGCTCCACCAAAT 61.115 57.895 0.00 0.00 0.00 2.32
3005 3045 0.792640 CGCTGCTCAGAAAACGATGT 59.207 50.000 0.29 0.00 0.00 3.06
3082 3124 3.055385 CGGATCTAGGTTTTCACCCAGAA 60.055 47.826 0.00 0.00 43.28 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 50 9.566432 AAATTTCCATGGTGCATAAAGTAAAAA 57.434 25.926 12.58 0.07 0.00 1.94
50 51 9.566432 AAAATTTCCATGGTGCATAAAGTAAAA 57.434 25.926 12.58 0.28 0.00 1.52
52 53 9.646427 GTAAAATTTCCATGGTGCATAAAGTAA 57.354 29.630 12.58 0.00 0.00 2.24
53 54 9.030452 AGTAAAATTTCCATGGTGCATAAAGTA 57.970 29.630 12.58 0.00 0.00 2.24
54 55 7.906327 AGTAAAATTTCCATGGTGCATAAAGT 58.094 30.769 12.58 0.48 0.00 2.66
55 56 8.776376 AAGTAAAATTTCCATGGTGCATAAAG 57.224 30.769 12.58 0.00 0.00 1.85
56 57 8.997323 CAAAGTAAAATTTCCATGGTGCATAAA 58.003 29.630 12.58 4.74 0.00 1.40
57 58 8.153550 ACAAAGTAAAATTTCCATGGTGCATAA 58.846 29.630 12.58 0.00 0.00 1.90
58 59 7.601886 CACAAAGTAAAATTTCCATGGTGCATA 59.398 33.333 12.58 0.00 0.00 3.14
59 60 6.427547 CACAAAGTAAAATTTCCATGGTGCAT 59.572 34.615 12.58 0.00 0.00 3.96
60 61 5.757320 CACAAAGTAAAATTTCCATGGTGCA 59.243 36.000 12.58 0.00 0.00 4.57
61 62 5.757808 ACACAAAGTAAAATTTCCATGGTGC 59.242 36.000 12.58 0.00 0.00 5.01
62 63 8.924691 CATACACAAAGTAAAATTTCCATGGTG 58.075 33.333 12.58 0.00 36.05 4.17
63 64 8.865090 TCATACACAAAGTAAAATTTCCATGGT 58.135 29.630 12.58 0.00 36.05 3.55
64 65 9.874205 ATCATACACAAAGTAAAATTTCCATGG 57.126 29.630 4.97 4.97 36.05 3.66
66 67 9.874205 CCATCATACACAAAGTAAAATTTCCAT 57.126 29.630 0.00 0.00 36.05 3.41
67 68 9.083422 TCCATCATACACAAAGTAAAATTTCCA 57.917 29.630 0.00 0.00 36.05 3.53
68 69 9.921637 TTCCATCATACACAAAGTAAAATTTCC 57.078 29.630 0.00 0.00 36.05 3.13
71 72 9.423061 GCTTTCCATCATACACAAAGTAAAATT 57.577 29.630 0.00 0.00 36.05 1.82
72 73 8.806146 AGCTTTCCATCATACACAAAGTAAAAT 58.194 29.630 0.00 0.00 36.05 1.82
73 74 8.177119 AGCTTTCCATCATACACAAAGTAAAA 57.823 30.769 0.00 0.00 36.05 1.52
74 75 7.759489 AGCTTTCCATCATACACAAAGTAAA 57.241 32.000 0.00 0.00 36.05 2.01
75 76 7.446931 TGAAGCTTTCCATCATACACAAAGTAA 59.553 33.333 0.00 0.00 36.05 2.24
76 77 6.939730 TGAAGCTTTCCATCATACACAAAGTA 59.060 34.615 0.00 0.00 37.06 2.24
77 78 5.769662 TGAAGCTTTCCATCATACACAAAGT 59.230 36.000 0.00 0.00 0.00 2.66
78 79 6.258230 TGAAGCTTTCCATCATACACAAAG 57.742 37.500 0.00 0.00 0.00 2.77
79 80 6.839124 ATGAAGCTTTCCATCATACACAAA 57.161 33.333 0.00 0.00 32.25 2.83
80 81 6.839124 AATGAAGCTTTCCATCATACACAA 57.161 33.333 0.00 0.00 33.60 3.33
81 82 6.839124 AAATGAAGCTTTCCATCATACACA 57.161 33.333 0.00 0.00 33.60 3.72
108 109 9.696917 GGTCAGAAAAATAAAGTTGACATGATT 57.303 29.630 0.00 0.00 37.31 2.57
109 110 8.859090 TGGTCAGAAAAATAAAGTTGACATGAT 58.141 29.630 0.00 0.00 37.31 2.45
110 111 8.231692 TGGTCAGAAAAATAAAGTTGACATGA 57.768 30.769 0.00 0.00 37.31 3.07
111 112 8.918658 CATGGTCAGAAAAATAAAGTTGACATG 58.081 33.333 5.01 0.00 37.31 3.21
112 113 8.090214 CCATGGTCAGAAAAATAAAGTTGACAT 58.910 33.333 2.57 0.00 37.31 3.06
113 114 7.432869 CCATGGTCAGAAAAATAAAGTTGACA 58.567 34.615 2.57 0.00 37.31 3.58
114 115 6.366061 GCCATGGTCAGAAAAATAAAGTTGAC 59.634 38.462 14.67 0.00 35.42 3.18
115 116 6.041409 TGCCATGGTCAGAAAAATAAAGTTGA 59.959 34.615 14.67 0.00 0.00 3.18
116 117 6.222389 TGCCATGGTCAGAAAAATAAAGTTG 58.778 36.000 14.67 0.00 0.00 3.16
117 118 6.418057 TGCCATGGTCAGAAAAATAAAGTT 57.582 33.333 14.67 0.00 0.00 2.66
118 119 6.418057 TTGCCATGGTCAGAAAAATAAAGT 57.582 33.333 14.67 0.00 0.00 2.66
119 120 7.910441 ATTTGCCATGGTCAGAAAAATAAAG 57.090 32.000 14.67 0.00 0.00 1.85
120 121 8.688747 AAATTTGCCATGGTCAGAAAAATAAA 57.311 26.923 14.67 1.44 0.00 1.40
121 122 8.688747 AAAATTTGCCATGGTCAGAAAAATAA 57.311 26.923 14.67 2.12 0.00 1.40
122 123 9.956640 ATAAAATTTGCCATGGTCAGAAAAATA 57.043 25.926 14.67 3.62 0.00 1.40
123 124 8.866970 ATAAAATTTGCCATGGTCAGAAAAAT 57.133 26.923 14.67 7.54 0.00 1.82
124 125 8.688747 AATAAAATTTGCCATGGTCAGAAAAA 57.311 26.923 14.67 5.59 0.00 1.94
125 126 9.956640 ATAATAAAATTTGCCATGGTCAGAAAA 57.043 25.926 14.67 7.29 0.00 2.29
126 127 9.956640 AATAATAAAATTTGCCATGGTCAGAAA 57.043 25.926 14.67 8.07 0.00 2.52
127 128 9.956640 AAATAATAAAATTTGCCATGGTCAGAA 57.043 25.926 14.67 9.23 0.00 3.02
128 129 9.956640 AAAATAATAAAATTTGCCATGGTCAGA 57.043 25.926 14.67 7.69 0.00 3.27
175 176 9.928618 TCCCAATATAAATTTGTCATGGTCTTA 57.071 29.630 14.03 0.59 0.00 2.10
176 177 8.695456 GTCCCAATATAAATTTGTCATGGTCTT 58.305 33.333 14.03 0.00 0.00 3.01
177 178 8.061304 AGTCCCAATATAAATTTGTCATGGTCT 58.939 33.333 14.03 10.46 0.00 3.85
178 179 8.237811 AGTCCCAATATAAATTTGTCATGGTC 57.762 34.615 14.03 9.07 0.00 4.02
179 180 8.608185 AAGTCCCAATATAAATTTGTCATGGT 57.392 30.769 14.03 0.00 0.00 3.55
180 181 9.316730 CAAAGTCCCAATATAAATTTGTCATGG 57.683 33.333 0.00 6.46 0.00 3.66
181 182 9.316730 CCAAAGTCCCAATATAAATTTGTCATG 57.683 33.333 0.00 0.00 0.00 3.07
182 183 7.986889 GCCAAAGTCCCAATATAAATTTGTCAT 59.013 33.333 0.00 0.00 0.00 3.06
183 184 7.038729 TGCCAAAGTCCCAATATAAATTTGTCA 60.039 33.333 0.00 0.00 0.00 3.58
184 185 7.327214 TGCCAAAGTCCCAATATAAATTTGTC 58.673 34.615 0.00 0.00 0.00 3.18
185 186 7.251321 TGCCAAAGTCCCAATATAAATTTGT 57.749 32.000 0.00 0.00 0.00 2.83
186 187 7.823799 ACTTGCCAAAGTCCCAATATAAATTTG 59.176 33.333 0.00 0.00 43.34 2.32
187 188 7.917003 ACTTGCCAAAGTCCCAATATAAATTT 58.083 30.769 0.00 0.00 43.34 1.82
188 189 7.494922 ACTTGCCAAAGTCCCAATATAAATT 57.505 32.000 0.00 0.00 43.34 1.82
189 190 7.494922 AACTTGCCAAAGTCCCAATATAAAT 57.505 32.000 0.00 0.00 46.15 1.40
190 191 6.926630 AACTTGCCAAAGTCCCAATATAAA 57.073 33.333 0.00 0.00 46.15 1.40
191 192 6.723977 AGAAACTTGCCAAAGTCCCAATATAA 59.276 34.615 0.00 0.00 46.15 0.98
192 193 6.252995 AGAAACTTGCCAAAGTCCCAATATA 58.747 36.000 0.00 0.00 46.15 0.86
193 194 5.086621 AGAAACTTGCCAAAGTCCCAATAT 58.913 37.500 0.00 0.00 46.15 1.28
194 195 4.479158 AGAAACTTGCCAAAGTCCCAATA 58.521 39.130 0.00 0.00 46.15 1.90
195 196 3.308401 AGAAACTTGCCAAAGTCCCAAT 58.692 40.909 0.00 0.00 46.15 3.16
196 197 2.745968 AGAAACTTGCCAAAGTCCCAA 58.254 42.857 0.00 0.00 46.15 4.12
197 198 2.452600 AGAAACTTGCCAAAGTCCCA 57.547 45.000 0.00 0.00 46.15 4.37
198 199 3.819564 AAAGAAACTTGCCAAAGTCCC 57.180 42.857 0.00 0.00 46.15 4.46
199 200 7.786178 AATAAAAAGAAACTTGCCAAAGTCC 57.214 32.000 0.00 0.00 46.15 3.85
202 203 9.929722 GGTTTAATAAAAAGAAACTTGCCAAAG 57.070 29.630 0.00 0.00 39.49 2.77
203 204 9.449719 TGGTTTAATAAAAAGAAACTTGCCAAA 57.550 25.926 0.00 0.00 34.26 3.28
204 205 9.620259 ATGGTTTAATAAAAAGAAACTTGCCAA 57.380 25.926 0.00 0.00 34.26 4.52
205 206 9.050601 CATGGTTTAATAAAAAGAAACTTGCCA 57.949 29.630 0.00 0.00 34.26 4.92
206 207 8.503196 CCATGGTTTAATAAAAAGAAACTTGCC 58.497 33.333 2.57 0.00 34.26 4.52
207 208 9.267084 TCCATGGTTTAATAAAAAGAAACTTGC 57.733 29.630 12.58 0.00 34.26 4.01
223 224 9.238368 CCAACTAGTAAGAAAATCCATGGTTTA 57.762 33.333 12.58 0.00 0.00 2.01
224 225 7.947890 TCCAACTAGTAAGAAAATCCATGGTTT 59.052 33.333 12.58 6.97 0.00 3.27
225 226 7.393515 GTCCAACTAGTAAGAAAATCCATGGTT 59.606 37.037 12.58 0.00 0.00 3.67
226 227 6.884836 GTCCAACTAGTAAGAAAATCCATGGT 59.115 38.462 12.58 0.00 0.00 3.55
227 228 6.318900 GGTCCAACTAGTAAGAAAATCCATGG 59.681 42.308 4.97 4.97 0.00 3.66
228 229 6.037172 CGGTCCAACTAGTAAGAAAATCCATG 59.963 42.308 0.00 0.00 0.00 3.66
229 230 6.113411 CGGTCCAACTAGTAAGAAAATCCAT 58.887 40.000 0.00 0.00 0.00 3.41
230 231 5.012354 ACGGTCCAACTAGTAAGAAAATCCA 59.988 40.000 0.00 0.00 0.00 3.41
231 232 5.350640 CACGGTCCAACTAGTAAGAAAATCC 59.649 44.000 0.00 0.00 0.00 3.01
232 233 5.350640 CCACGGTCCAACTAGTAAGAAAATC 59.649 44.000 0.00 0.00 0.00 2.17
233 234 5.243207 CCACGGTCCAACTAGTAAGAAAAT 58.757 41.667 0.00 0.00 0.00 1.82
234 235 4.634199 CCACGGTCCAACTAGTAAGAAAA 58.366 43.478 0.00 0.00 0.00 2.29
235 236 3.555586 GCCACGGTCCAACTAGTAAGAAA 60.556 47.826 0.00 0.00 0.00 2.52
236 237 2.028748 GCCACGGTCCAACTAGTAAGAA 60.029 50.000 0.00 0.00 0.00 2.52
237 238 1.547372 GCCACGGTCCAACTAGTAAGA 59.453 52.381 0.00 0.00 0.00 2.10
238 239 1.405121 GGCCACGGTCCAACTAGTAAG 60.405 57.143 0.00 0.00 0.00 2.34
239 240 0.609662 GGCCACGGTCCAACTAGTAA 59.390 55.000 0.00 0.00 0.00 2.24
240 241 0.542467 TGGCCACGGTCCAACTAGTA 60.542 55.000 0.00 0.00 0.00 1.82
241 242 1.198759 ATGGCCACGGTCCAACTAGT 61.199 55.000 8.16 0.00 37.13 2.57
242 243 0.035439 AATGGCCACGGTCCAACTAG 60.035 55.000 8.16 0.00 37.13 2.57
243 244 0.402504 AAATGGCCACGGTCCAACTA 59.597 50.000 8.16 0.00 37.13 2.24
244 245 0.469144 AAAATGGCCACGGTCCAACT 60.469 50.000 8.16 0.00 37.13 3.16
245 246 1.249407 TAAAATGGCCACGGTCCAAC 58.751 50.000 8.16 0.00 37.13 3.77
246 247 2.223803 ATAAAATGGCCACGGTCCAA 57.776 45.000 8.16 0.00 37.13 3.53
247 248 2.223803 AATAAAATGGCCACGGTCCA 57.776 45.000 8.16 2.35 38.09 4.02
248 249 3.603158 AAAATAAAATGGCCACGGTCC 57.397 42.857 8.16 0.00 0.00 4.46
249 250 5.803461 GTCTAAAAATAAAATGGCCACGGTC 59.197 40.000 8.16 0.00 0.00 4.79
250 251 5.336929 GGTCTAAAAATAAAATGGCCACGGT 60.337 40.000 8.16 0.00 0.00 4.83
251 252 5.106442 GGTCTAAAAATAAAATGGCCACGG 58.894 41.667 8.16 0.00 0.00 4.94
252 253 5.715070 TGGTCTAAAAATAAAATGGCCACG 58.285 37.500 8.16 0.00 0.00 4.94
253 254 6.538381 CCATGGTCTAAAAATAAAATGGCCAC 59.462 38.462 8.16 0.00 0.00 5.01
254 255 6.648192 CCATGGTCTAAAAATAAAATGGCCA 58.352 36.000 8.56 8.56 0.00 5.36
268 269 9.365906 ACATGAAATAAATATGCCATGGTCTAA 57.634 29.630 14.67 0.00 36.61 2.10
269 270 8.938801 ACATGAAATAAATATGCCATGGTCTA 57.061 30.769 14.67 5.74 36.61 2.59
270 271 7.844493 ACATGAAATAAATATGCCATGGTCT 57.156 32.000 14.67 3.38 36.61 3.85
271 272 9.577110 CATACATGAAATAAATATGCCATGGTC 57.423 33.333 14.67 6.41 36.61 4.02
272 273 9.311676 TCATACATGAAATAAATATGCCATGGT 57.688 29.630 14.67 0.00 36.61 3.55
276 277 8.252417 GCCATCATACATGAAATAAATATGCCA 58.748 33.333 0.00 0.00 40.69 4.92
277 278 8.252417 TGCCATCATACATGAAATAAATATGCC 58.748 33.333 0.00 0.00 40.69 4.40
278 279 9.642327 TTGCCATCATACATGAAATAAATATGC 57.358 29.630 0.00 0.00 40.69 3.14
332 333 8.028652 AGGATTTTTCCATGGTTAGACAAAAA 57.971 30.769 17.11 17.11 0.00 1.94
333 334 7.610580 AGGATTTTTCCATGGTTAGACAAAA 57.389 32.000 12.58 7.14 0.00 2.44
334 335 7.610580 AAGGATTTTTCCATGGTTAGACAAA 57.389 32.000 12.58 0.32 0.00 2.83
335 336 7.610580 AAAGGATTTTTCCATGGTTAGACAA 57.389 32.000 12.58 0.00 31.62 3.18
351 352 9.187996 ACAATTTTCCATGTTCAAAAAGGATTT 57.812 25.926 0.00 0.00 42.41 2.17
352 353 8.750515 ACAATTTTCCATGTTCAAAAAGGATT 57.249 26.923 0.00 0.00 0.00 3.01
395 396 5.139001 ACAAAATGCCATGGTCCAATTTTT 58.861 33.333 14.67 5.84 0.00 1.94
396 397 4.727677 ACAAAATGCCATGGTCCAATTTT 58.272 34.783 14.67 16.14 0.00 1.82
397 398 4.370094 ACAAAATGCCATGGTCCAATTT 57.630 36.364 14.67 11.48 0.00 1.82
398 399 4.531732 AGTACAAAATGCCATGGTCCAATT 59.468 37.500 14.67 5.99 0.00 2.32
399 400 4.095946 AGTACAAAATGCCATGGTCCAAT 58.904 39.130 14.67 0.00 0.00 3.16
400 401 3.505386 AGTACAAAATGCCATGGTCCAA 58.495 40.909 14.67 0.00 0.00 3.53
401 402 3.168035 AGTACAAAATGCCATGGTCCA 57.832 42.857 14.67 3.77 0.00 4.02
402 403 4.270008 ACTAGTACAAAATGCCATGGTCC 58.730 43.478 14.67 0.00 0.00 4.46
403 404 5.897377 AACTAGTACAAAATGCCATGGTC 57.103 39.130 14.67 6.41 0.00 4.02
404 405 5.772672 TCAAACTAGTACAAAATGCCATGGT 59.227 36.000 14.67 0.00 0.00 3.55
405 406 6.092748 GTCAAACTAGTACAAAATGCCATGG 58.907 40.000 7.63 7.63 0.00 3.66
406 407 6.092748 GGTCAAACTAGTACAAAATGCCATG 58.907 40.000 0.00 0.00 0.00 3.66
407 408 5.772672 TGGTCAAACTAGTACAAAATGCCAT 59.227 36.000 0.00 0.00 0.00 4.40
408 409 5.133941 TGGTCAAACTAGTACAAAATGCCA 58.866 37.500 0.00 0.00 0.00 4.92
409 410 5.699097 TGGTCAAACTAGTACAAAATGCC 57.301 39.130 0.00 0.00 0.00 4.40
410 411 6.092748 CCATGGTCAAACTAGTACAAAATGC 58.907 40.000 2.57 0.00 0.00 3.56
411 412 7.214467 ACCATGGTCAAACTAGTACAAAATG 57.786 36.000 13.00 0.00 0.00 2.32
412 413 6.148811 CGACCATGGTCAAACTAGTACAAAAT 59.851 38.462 37.42 1.98 44.77 1.82
413 414 5.467399 CGACCATGGTCAAACTAGTACAAAA 59.533 40.000 37.42 0.00 44.77 2.44
414 415 4.992319 CGACCATGGTCAAACTAGTACAAA 59.008 41.667 37.42 0.00 44.77 2.83
415 416 4.039488 ACGACCATGGTCAAACTAGTACAA 59.961 41.667 37.42 0.00 44.77 2.41
416 417 3.575256 ACGACCATGGTCAAACTAGTACA 59.425 43.478 37.42 0.00 44.77 2.90
417 418 4.184079 ACGACCATGGTCAAACTAGTAC 57.816 45.455 37.42 13.35 44.77 2.73
418 419 4.877378 AACGACCATGGTCAAACTAGTA 57.123 40.909 37.42 0.00 44.77 1.82
419 420 3.764237 AACGACCATGGTCAAACTAGT 57.236 42.857 37.42 25.35 44.77 2.57
420 421 6.737254 ATAAAACGACCATGGTCAAACTAG 57.263 37.500 37.42 24.75 44.77 2.57
421 422 7.513371 AAATAAAACGACCATGGTCAAACTA 57.487 32.000 37.42 24.58 44.77 2.24
422 423 6.399639 AAATAAAACGACCATGGTCAAACT 57.600 33.333 37.42 23.44 44.77 2.66
423 424 7.471657 AAAAATAAAACGACCATGGTCAAAC 57.528 32.000 37.42 17.20 44.77 2.93
424 425 8.630917 TCTAAAAATAAAACGACCATGGTCAAA 58.369 29.630 37.42 20.88 44.77 2.69
425 426 8.077386 GTCTAAAAATAAAACGACCATGGTCAA 58.923 33.333 37.42 20.57 44.77 3.18
426 427 7.308710 GGTCTAAAAATAAAACGACCATGGTCA 60.309 37.037 37.42 22.33 44.77 4.02
427 428 7.025365 GGTCTAAAAATAAAACGACCATGGTC 58.975 38.462 31.59 31.59 40.38 4.02
428 429 6.490721 TGGTCTAAAAATAAAACGACCATGGT 59.509 34.615 19.89 19.89 44.13 3.55
429 430 6.915349 TGGTCTAAAAATAAAACGACCATGG 58.085 36.000 11.19 11.19 44.13 3.66
433 434 7.586747 TGACATGGTCTAAAAATAAAACGACC 58.413 34.615 0.00 0.00 40.90 4.79
434 435 9.113876 CTTGACATGGTCTAAAAATAAAACGAC 57.886 33.333 0.00 0.00 33.15 4.34
435 436 8.842280 ACTTGACATGGTCTAAAAATAAAACGA 58.158 29.630 0.00 0.00 33.15 3.85
436 437 9.458374 AACTTGACATGGTCTAAAAATAAAACG 57.542 29.630 0.00 0.00 33.15 3.60
443 444 9.672086 CGAATTAAACTTGACATGGTCTAAAAA 57.328 29.630 0.00 0.00 33.15 1.94
444 445 8.842280 ACGAATTAAACTTGACATGGTCTAAAA 58.158 29.630 0.00 0.00 33.15 1.52
445 446 8.286800 CACGAATTAAACTTGACATGGTCTAAA 58.713 33.333 0.00 0.00 33.15 1.85
446 447 7.442969 ACACGAATTAAACTTGACATGGTCTAA 59.557 33.333 0.00 0.00 33.15 2.10
447 448 6.932400 ACACGAATTAAACTTGACATGGTCTA 59.068 34.615 0.00 0.00 33.15 2.59
448 449 5.763204 ACACGAATTAAACTTGACATGGTCT 59.237 36.000 0.00 0.00 33.15 3.85
449 450 5.997385 ACACGAATTAAACTTGACATGGTC 58.003 37.500 0.00 0.00 0.00 4.02
450 451 6.347079 CGTACACGAATTAAACTTGACATGGT 60.347 38.462 0.00 0.00 43.02 3.55
451 452 6.013085 CGTACACGAATTAAACTTGACATGG 58.987 40.000 0.00 0.00 43.02 3.66
452 453 6.813327 TCGTACACGAATTAAACTTGACATG 58.187 36.000 1.21 0.00 46.30 3.21
468 469 6.432802 AAAAGAAATTTGCAATCGTACACG 57.567 33.333 0.00 0.00 41.45 4.49
469 470 8.061125 AGAAAAAGAAATTTGCAATCGTACAC 57.939 30.769 0.00 0.00 0.00 2.90
470 471 9.393249 CTAGAAAAAGAAATTTGCAATCGTACA 57.607 29.630 0.00 0.00 0.00 2.90
471 472 9.607285 TCTAGAAAAAGAAATTTGCAATCGTAC 57.393 29.630 0.00 0.00 0.00 3.67
473 474 9.346725 GATCTAGAAAAAGAAATTTGCAATCGT 57.653 29.630 0.00 0.00 0.00 3.73
474 475 9.345517 TGATCTAGAAAAAGAAATTTGCAATCG 57.654 29.630 0.00 0.00 0.00 3.34
477 478 9.985730 ACATGATCTAGAAAAAGAAATTTGCAA 57.014 25.926 0.00 0.00 0.00 4.08
478 479 9.630098 GACATGATCTAGAAAAAGAAATTTGCA 57.370 29.630 0.00 0.00 0.00 4.08
479 480 9.630098 TGACATGATCTAGAAAAAGAAATTTGC 57.370 29.630 0.00 0.00 0.00 3.68
518 519 9.191479 TGAAAAGTAAAATTTACCAAGGTCAGA 57.809 29.630 11.83 0.00 0.00 3.27
519 520 9.810545 TTGAAAAGTAAAATTTACCAAGGTCAG 57.189 29.630 11.83 0.00 0.00 3.51
520 521 9.589111 GTTGAAAAGTAAAATTTACCAAGGTCA 57.411 29.630 11.83 6.72 0.00 4.02
521 522 9.589111 TGTTGAAAAGTAAAATTTACCAAGGTC 57.411 29.630 11.83 4.56 0.00 3.85
524 525 9.862585 GCATGTTGAAAAGTAAAATTTACCAAG 57.137 29.630 11.83 0.92 0.00 3.61
525 526 8.831550 GGCATGTTGAAAAGTAAAATTTACCAA 58.168 29.630 11.83 6.71 0.00 3.67
526 527 7.987458 TGGCATGTTGAAAAGTAAAATTTACCA 59.013 29.630 11.83 2.42 0.00 3.25
527 528 8.371770 TGGCATGTTGAAAAGTAAAATTTACC 57.628 30.769 11.83 0.00 0.00 2.85
536 537 9.553064 ACATAAAATTTGGCATGTTGAAAAGTA 57.447 25.926 7.25 0.00 0.00 2.24
537 538 8.449251 ACATAAAATTTGGCATGTTGAAAAGT 57.551 26.923 7.25 0.00 0.00 2.66
538 539 9.384682 GAACATAAAATTTGGCATGTTGAAAAG 57.615 29.630 21.49 0.00 40.67 2.27
539 540 8.348507 GGAACATAAAATTTGGCATGTTGAAAA 58.651 29.630 21.49 0.00 40.67 2.29
540 541 7.307632 CGGAACATAAAATTTGGCATGTTGAAA 60.308 33.333 21.49 0.00 40.67 2.69
541 542 6.146837 CGGAACATAAAATTTGGCATGTTGAA 59.853 34.615 21.49 0.00 40.67 2.69
542 543 5.636965 CGGAACATAAAATTTGGCATGTTGA 59.363 36.000 21.49 0.00 40.67 3.18
543 544 5.636965 TCGGAACATAAAATTTGGCATGTTG 59.363 36.000 21.49 13.15 40.67 3.33
544 545 5.637387 GTCGGAACATAAAATTTGGCATGTT 59.363 36.000 18.63 18.63 42.66 2.71
545 546 5.167845 GTCGGAACATAAAATTTGGCATGT 58.832 37.500 7.25 7.25 33.12 3.21
546 547 4.566360 GGTCGGAACATAAAATTTGGCATG 59.434 41.667 0.00 0.00 0.00 4.06
547 548 4.221703 TGGTCGGAACATAAAATTTGGCAT 59.778 37.500 0.00 0.00 0.00 4.40
548 549 3.574396 TGGTCGGAACATAAAATTTGGCA 59.426 39.130 0.00 0.00 0.00 4.92
549 550 4.181309 TGGTCGGAACATAAAATTTGGC 57.819 40.909 0.00 0.00 0.00 4.52
550 551 5.108517 CCATGGTCGGAACATAAAATTTGG 58.891 41.667 8.45 1.53 0.00 3.28
551 552 4.566360 GCCATGGTCGGAACATAAAATTTG 59.434 41.667 14.67 0.00 0.00 2.32
552 553 4.221703 TGCCATGGTCGGAACATAAAATTT 59.778 37.500 14.67 0.00 0.00 1.82
553 554 3.766591 TGCCATGGTCGGAACATAAAATT 59.233 39.130 14.67 0.00 0.00 1.82
554 555 3.360867 TGCCATGGTCGGAACATAAAAT 58.639 40.909 14.67 0.00 0.00 1.82
555 556 2.796557 TGCCATGGTCGGAACATAAAA 58.203 42.857 14.67 0.00 0.00 1.52
556 557 2.498644 TGCCATGGTCGGAACATAAA 57.501 45.000 14.67 0.00 0.00 1.40
557 558 2.498644 TTGCCATGGTCGGAACATAA 57.501 45.000 14.67 0.00 0.00 1.90
558 559 2.727123 ATTGCCATGGTCGGAACATA 57.273 45.000 14.67 0.00 0.00 2.29
559 560 1.851304 AATTGCCATGGTCGGAACAT 58.149 45.000 14.67 1.85 0.00 2.71
560 561 1.626686 AAATTGCCATGGTCGGAACA 58.373 45.000 14.67 0.00 0.00 3.18
561 562 2.741759 AAAATTGCCATGGTCGGAAC 57.258 45.000 14.67 0.00 0.00 3.62
592 593 8.672815 CGGCAAAAATATAAAATTTCCATGGTT 58.327 29.630 12.58 0.13 0.00 3.67
593 594 7.826744 ACGGCAAAAATATAAAATTTCCATGGT 59.173 29.630 12.58 0.00 0.00 3.55
594 595 8.207521 ACGGCAAAAATATAAAATTTCCATGG 57.792 30.769 4.97 4.97 0.00 3.66
595 596 8.877779 TGACGGCAAAAATATAAAATTTCCATG 58.122 29.630 0.00 0.00 0.00 3.66
596 597 9.612066 ATGACGGCAAAAATATAAAATTTCCAT 57.388 25.926 0.00 0.00 0.00 3.41
597 598 9.442047 AATGACGGCAAAAATATAAAATTTCCA 57.558 25.926 0.00 0.00 0.00 3.53
605 606 9.575783 GGTCTAAAAATGACGGCAAAAATATAA 57.424 29.630 0.00 0.00 35.45 0.98
618 619 5.391312 AGTTGCCATGGTCTAAAAATGAC 57.609 39.130 14.67 0.00 0.00 3.06
626 627 2.969821 ACCAAAGTTGCCATGGTCTA 57.030 45.000 14.67 0.00 43.90 2.59
677 678 7.309377 CCAGAAATCTGCCACATCTAAGAAAAA 60.309 37.037 4.87 0.00 42.47 1.94
749 754 2.852075 TTCCACCCTCGGCCAACT 60.852 61.111 2.24 0.00 0.00 3.16
768 773 1.314730 ACCGTTTACCAGTTTGCCAG 58.685 50.000 0.00 0.00 0.00 4.85
776 781 2.621526 AGGAAAAGCAACCGTTTACCAG 59.378 45.455 0.00 0.00 0.00 4.00
825 830 0.179187 CGTCTCGACTTCACTCGCAT 60.179 55.000 0.00 0.00 33.47 4.73
843 848 3.361158 TTGGTTGCGATGGTGGCG 61.361 61.111 0.00 0.00 0.00 5.69
893 904 3.373110 GGGGAATTAATGGAGGACAAGCT 60.373 47.826 0.00 0.00 0.00 3.74
895 906 3.954258 GTGGGGAATTAATGGAGGACAAG 59.046 47.826 0.00 0.00 0.00 3.16
896 907 3.309556 GGTGGGGAATTAATGGAGGACAA 60.310 47.826 0.00 0.00 0.00 3.18
898 909 2.243736 TGGTGGGGAATTAATGGAGGAC 59.756 50.000 0.00 0.00 0.00 3.85
899 910 2.513738 CTGGTGGGGAATTAATGGAGGA 59.486 50.000 0.00 0.00 0.00 3.71
901 912 2.310538 GCTGGTGGGGAATTAATGGAG 58.689 52.381 0.00 0.00 0.00 3.86
902 913 1.063266 GGCTGGTGGGGAATTAATGGA 60.063 52.381 0.00 0.00 0.00 3.41
903 914 1.413118 GGCTGGTGGGGAATTAATGG 58.587 55.000 0.00 0.00 0.00 3.16
904 915 1.032014 CGGCTGGTGGGGAATTAATG 58.968 55.000 0.00 0.00 0.00 1.90
905 916 0.755327 GCGGCTGGTGGGGAATTAAT 60.755 55.000 0.00 0.00 0.00 1.40
906 917 1.379309 GCGGCTGGTGGGGAATTAA 60.379 57.895 0.00 0.00 0.00 1.40
907 918 2.274104 GCGGCTGGTGGGGAATTA 59.726 61.111 0.00 0.00 0.00 1.40
908 919 4.759205 GGCGGCTGGTGGGGAATT 62.759 66.667 0.00 0.00 0.00 2.17
925 936 7.065563 TGCTCCTCTTAAGTCTTAACTACGTAG 59.934 40.741 20.97 20.97 33.48 3.51
948 959 1.226974 CGCTACATACACGGCTGCT 60.227 57.895 0.00 0.00 0.00 4.24
956 967 2.155819 CACGCACGCGCTACATACA 61.156 57.895 12.02 0.00 44.19 2.29
976 992 1.251527 TGCTGAGGACGGAAGAGGAC 61.252 60.000 0.00 0.00 0.00 3.85
1095 1112 1.347564 CAAGAAGAGCGCGCATGAG 59.652 57.895 35.10 12.07 0.00 2.90
1180 1203 1.090052 GGCTCCTTCGAATTCGTGGG 61.090 60.000 28.21 26.49 40.80 4.61
1222 1248 4.421479 CTCCTCGCCGCGAACAGT 62.421 66.667 17.53 0.00 34.74 3.55
1929 1967 0.390472 CGCTCTCCAGGAACACCTTC 60.390 60.000 0.00 0.00 30.75 3.46
2243 2281 1.787057 GCCGATCTCCTCGTCATCGT 61.787 60.000 0.00 0.00 46.18 3.73
2247 2285 2.121538 CCTGCCGATCTCCTCGTCA 61.122 63.158 0.00 0.00 46.18 4.35
2263 2301 3.007920 CTCTGGGTGCAGGAGCCT 61.008 66.667 11.91 0.00 43.37 4.58
2296 2334 4.024556 CGGCATGGTAGAACATCATTTCTC 60.025 45.833 0.00 0.00 37.09 2.87
2297 2335 3.879295 CGGCATGGTAGAACATCATTTCT 59.121 43.478 0.00 0.00 39.28 2.52
2298 2336 3.003689 CCGGCATGGTAGAACATCATTTC 59.996 47.826 0.00 0.00 0.00 2.17
2299 2337 2.951642 CCGGCATGGTAGAACATCATTT 59.048 45.455 0.00 0.00 0.00 2.32
2300 2338 2.575532 CCGGCATGGTAGAACATCATT 58.424 47.619 0.00 0.00 0.00 2.57
2301 2339 1.202806 CCCGGCATGGTAGAACATCAT 60.203 52.381 0.00 0.00 35.15 2.45
2302 2340 0.180171 CCCGGCATGGTAGAACATCA 59.820 55.000 0.00 0.00 35.15 3.07
2303 2341 0.468226 TCCCGGCATGGTAGAACATC 59.532 55.000 0.00 0.00 35.15 3.06
2304 2342 1.140312 ATCCCGGCATGGTAGAACAT 58.860 50.000 0.00 0.00 35.15 2.71
2305 2343 1.796017 TATCCCGGCATGGTAGAACA 58.204 50.000 0.00 0.00 35.15 3.18
2306 2344 2.354805 GGATATCCCGGCATGGTAGAAC 60.355 54.545 11.02 0.00 35.15 3.01
2307 2345 1.906574 GGATATCCCGGCATGGTAGAA 59.093 52.381 11.02 0.00 35.15 2.10
2308 2346 1.568504 GGATATCCCGGCATGGTAGA 58.431 55.000 11.02 0.00 35.15 2.59
2319 2357 1.675641 GCCATGCACCGGATATCCC 60.676 63.158 16.36 2.50 0.00 3.85
2320 2358 0.613260 TAGCCATGCACCGGATATCC 59.387 55.000 9.46 12.14 0.00 2.59
2321 2359 2.350522 CTTAGCCATGCACCGGATATC 58.649 52.381 9.46 0.00 0.00 1.63
2322 2360 1.611673 GCTTAGCCATGCACCGGATAT 60.612 52.381 9.46 0.00 0.00 1.63
2323 2361 0.250295 GCTTAGCCATGCACCGGATA 60.250 55.000 9.46 3.01 0.00 2.59
2324 2362 1.526917 GCTTAGCCATGCACCGGAT 60.527 57.895 9.46 4.05 0.00 4.18
2325 2363 2.124736 GCTTAGCCATGCACCGGA 60.125 61.111 9.46 0.00 0.00 5.14
2347 2385 6.567321 GCATGTATCCGAATCTCCAAGAAATG 60.567 42.308 0.00 0.00 0.00 2.32
2348 2386 5.471456 GCATGTATCCGAATCTCCAAGAAAT 59.529 40.000 0.00 0.00 0.00 2.17
2349 2387 4.816385 GCATGTATCCGAATCTCCAAGAAA 59.184 41.667 0.00 0.00 0.00 2.52
2350 2388 4.141733 TGCATGTATCCGAATCTCCAAGAA 60.142 41.667 0.00 0.00 0.00 2.52
2351 2389 3.387699 TGCATGTATCCGAATCTCCAAGA 59.612 43.478 0.00 0.00 0.00 3.02
2352 2390 3.732212 TGCATGTATCCGAATCTCCAAG 58.268 45.455 0.00 0.00 0.00 3.61
2353 2391 3.836365 TGCATGTATCCGAATCTCCAA 57.164 42.857 0.00 0.00 0.00 3.53
2354 2392 3.836365 TTGCATGTATCCGAATCTCCA 57.164 42.857 0.00 0.00 0.00 3.86
2355 2393 4.999950 AGATTTGCATGTATCCGAATCTCC 59.000 41.667 7.40 0.00 37.55 3.71
2356 2394 5.106791 CCAGATTTGCATGTATCCGAATCTC 60.107 44.000 9.41 0.00 39.17 2.75
2357 2395 4.758674 CCAGATTTGCATGTATCCGAATCT 59.241 41.667 7.40 7.40 40.91 2.40
2358 2396 4.614535 GCCAGATTTGCATGTATCCGAATC 60.615 45.833 0.00 0.00 33.81 2.52
2359 2397 3.254166 GCCAGATTTGCATGTATCCGAAT 59.746 43.478 0.00 0.00 0.00 3.34
2360 2398 2.618241 GCCAGATTTGCATGTATCCGAA 59.382 45.455 0.00 0.00 0.00 4.30
2361 2399 2.221169 GCCAGATTTGCATGTATCCGA 58.779 47.619 0.00 0.00 0.00 4.55
2362 2400 1.267806 GGCCAGATTTGCATGTATCCG 59.732 52.381 0.00 0.00 0.00 4.18
2363 2401 1.615392 GGGCCAGATTTGCATGTATCC 59.385 52.381 4.39 0.00 0.00 2.59
2364 2402 1.267806 CGGGCCAGATTTGCATGTATC 59.732 52.381 4.39 0.00 0.00 2.24
2365 2403 1.321474 CGGGCCAGATTTGCATGTAT 58.679 50.000 4.39 0.00 0.00 2.29
2366 2404 1.383456 GCGGGCCAGATTTGCATGTA 61.383 55.000 7.23 0.00 0.00 2.29
2367 2405 2.713967 GCGGGCCAGATTTGCATGT 61.714 57.895 7.23 0.00 0.00 3.21
2368 2406 2.105528 GCGGGCCAGATTTGCATG 59.894 61.111 7.23 0.00 0.00 4.06
2369 2407 2.043652 AGCGGGCCAGATTTGCAT 60.044 55.556 7.23 0.00 0.00 3.96
2370 2408 2.476852 TACAGCGGGCCAGATTTGCA 62.477 55.000 7.23 0.00 0.00 4.08
2371 2409 1.103398 ATACAGCGGGCCAGATTTGC 61.103 55.000 7.23 0.00 0.00 3.68
2372 2410 1.334869 GAATACAGCGGGCCAGATTTG 59.665 52.381 7.23 3.96 0.00 2.32
2373 2411 1.064758 TGAATACAGCGGGCCAGATTT 60.065 47.619 7.23 0.00 0.00 2.17
2374 2412 0.546122 TGAATACAGCGGGCCAGATT 59.454 50.000 7.23 0.00 0.00 2.40
2375 2413 0.179045 GTGAATACAGCGGGCCAGAT 60.179 55.000 7.23 0.00 0.00 2.90
2376 2414 1.220749 GTGAATACAGCGGGCCAGA 59.779 57.895 7.23 0.00 0.00 3.86
2377 2415 1.819632 GGTGAATACAGCGGGCCAG 60.820 63.158 4.39 0.00 34.87 4.85
2378 2416 2.270850 GGTGAATACAGCGGGCCA 59.729 61.111 4.39 0.00 34.87 5.36
2384 2422 9.838339 ATAGGCAATATATAAGGTGAATACAGC 57.162 33.333 0.00 0.00 43.79 4.40
2391 2429 9.685276 CAATTGGATAGGCAATATATAAGGTGA 57.315 33.333 0.00 0.00 0.00 4.02
2392 2430 9.685276 TCAATTGGATAGGCAATATATAAGGTG 57.315 33.333 5.42 0.00 0.00 4.00
2399 2437 9.513906 TCGAAATTCAATTGGATAGGCAATATA 57.486 29.630 5.42 0.00 0.00 0.86
2400 2438 8.408043 TCGAAATTCAATTGGATAGGCAATAT 57.592 30.769 5.42 0.00 0.00 1.28
2401 2439 7.815840 TCGAAATTCAATTGGATAGGCAATA 57.184 32.000 5.42 0.00 0.00 1.90
2402 2440 6.713762 TCGAAATTCAATTGGATAGGCAAT 57.286 33.333 5.42 0.00 0.00 3.56
2403 2441 6.522625 TTCGAAATTCAATTGGATAGGCAA 57.477 33.333 5.42 0.00 0.00 4.52
2404 2442 6.152661 ACTTTCGAAATTCAATTGGATAGGCA 59.847 34.615 11.70 0.00 0.00 4.75
2405 2443 6.473455 CACTTTCGAAATTCAATTGGATAGGC 59.527 38.462 11.70 0.00 0.00 3.93
2406 2444 6.473455 GCACTTTCGAAATTCAATTGGATAGG 59.527 38.462 11.70 0.00 0.00 2.57
2407 2445 7.253422 AGCACTTTCGAAATTCAATTGGATAG 58.747 34.615 11.70 0.00 0.00 2.08
2408 2446 7.156876 AGCACTTTCGAAATTCAATTGGATA 57.843 32.000 11.70 0.00 0.00 2.59
2409 2447 6.029346 AGCACTTTCGAAATTCAATTGGAT 57.971 33.333 11.70 0.00 0.00 3.41
2410 2448 5.452078 AGCACTTTCGAAATTCAATTGGA 57.548 34.783 11.70 0.00 0.00 3.53
2411 2449 6.529463 AAAGCACTTTCGAAATTCAATTGG 57.471 33.333 11.70 0.00 0.00 3.16
2510 2548 8.151596 TGTTGTATGACTTTGTATGGTCTTGTA 58.848 33.333 0.00 0.00 34.01 2.41
2630 2668 1.003839 TAGGTTTGGCTGCGAGGTG 60.004 57.895 0.00 0.00 0.00 4.00
2704 2742 1.006571 TTGAGAAGTGCGTCGGACC 60.007 57.895 13.70 0.00 0.00 4.46
2710 2748 0.249911 GTCCTGGTTGAGAAGTGCGT 60.250 55.000 0.00 0.00 0.00 5.24
2755 2793 1.803453 ATGGATTGGTGGCAGGTGGT 61.803 55.000 0.00 0.00 0.00 4.16
2880 2918 1.399744 TTGTGGTGACTCTGCGTCCT 61.400 55.000 0.00 0.00 42.13 3.85
2946 2984 1.208535 ACGGATTATTTGGTGGAGCGA 59.791 47.619 0.00 0.00 0.00 4.93
2959 2997 1.112113 GCAGACCAGAGGACGGATTA 58.888 55.000 0.00 0.00 0.00 1.75
3082 3124 4.017877 GCGACTTGCTTGCGCTGT 62.018 61.111 9.73 0.00 46.53 4.40
3202 3246 3.528370 CGGCGTAGAGTGGGGAGG 61.528 72.222 0.00 0.00 0.00 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.