Multiple sequence alignment - TraesCS7B01G352100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G352100 chr7B 100.000 7539 0 0 1 7539 608712908 608720446 0.000000e+00 13923.0
1 TraesCS7B01G352100 chr7B 100.000 401 0 0 7658 8058 608720565 608720965 0.000000e+00 741.0
2 TraesCS7B01G352100 chr7D 92.303 5145 267 44 818 5891 560747757 560752843 0.000000e+00 7188.0
3 TraesCS7B01G352100 chr7D 88.394 1189 84 19 6263 7432 560753120 560754273 0.000000e+00 1382.0
4 TraesCS7B01G352100 chr7D 90.265 565 42 5 103 664 560747110 560747664 0.000000e+00 726.0
5 TraesCS7B01G352100 chr7D 94.737 152 7 1 7658 7808 560754301 560754452 1.350000e-57 235.0
6 TraesCS7B01G352100 chr7D 87.719 171 16 3 5910 6076 560752832 560753001 2.290000e-45 195.0
7 TraesCS7B01G352100 chr7D 94.175 103 6 0 7889 7991 560756294 560756396 3.010000e-34 158.0
8 TraesCS7B01G352100 chr7D 100.000 76 0 0 7983 8058 560829578 560829653 3.030000e-29 141.0
9 TraesCS7B01G352100 chr7D 90.411 73 6 1 7713 7785 560754273 560754344 2.390000e-15 95.3
10 TraesCS7B01G352100 chr7A 92.361 4163 223 46 1 4118 645021948 645026060 0.000000e+00 5838.0
11 TraesCS7B01G352100 chr7A 93.201 956 61 3 4117 5070 645026164 645027117 0.000000e+00 1402.0
12 TraesCS7B01G352100 chr7A 87.583 1055 97 24 6078 7122 645028183 645029213 0.000000e+00 1192.0
13 TraesCS7B01G352100 chr7A 85.731 862 62 19 5070 5891 645027219 645028059 0.000000e+00 854.0
14 TraesCS7B01G352100 chr7A 84.772 394 43 5 7152 7529 645029212 645029604 5.900000e-101 379.0
15 TraesCS7B01G352100 chr7A 89.474 171 14 2 5910 6076 645028048 645028218 6.330000e-51 213.0
16 TraesCS7B01G352100 chr3D 94.017 117 7 0 6291 6407 599348264 599348148 2.310000e-40 178.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G352100 chr7B 608712908 608720965 8057 False 7332.000000 13923 100.000000 1 8058 2 chr7B.!!$F1 8057
1 TraesCS7B01G352100 chr7D 560747110 560756396 9286 False 1425.614286 7188 91.143429 103 7991 7 chr7D.!!$F2 7888
2 TraesCS7B01G352100 chr7A 645021948 645029604 7656 False 1646.333333 5838 88.853667 1 7529 6 chr7A.!!$F1 7528

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
566 567 0.030504 CAGGCACACATTGTTTCGCA 59.969 50.0 4.73 0.00 0.00 5.10 F
1497 1519 0.538584 TGGGTGATCTGCTGCTAGTG 59.461 55.0 0.00 0.00 0.00 2.74 F
2396 2428 0.107643 GGCCATCCTCTTACCAGAGC 59.892 60.0 0.00 0.00 44.96 4.09 F
3277 3314 0.041839 CTCTTTCGTGTGTGTGCAGC 60.042 55.0 0.00 0.00 0.00 5.25 F
4202 4365 0.033601 AACCAGTTGGGCTGTCACAA 60.034 50.0 2.79 0.00 43.55 3.33 F
4203 4366 0.033601 ACCAGTTGGGCTGTCACAAA 60.034 50.0 2.79 0.00 43.55 2.83 F
5361 5639 0.451783 GATCCATGTGCCACGGAAAC 59.548 55.0 0.00 0.00 31.18 2.78 F
6076 6403 0.251916 TGGCTGGTGTACCATAGCAC 59.748 55.0 14.72 7.03 46.46 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1542 1564 0.249405 GCTCTTCCTCTGCTGGATCG 60.249 60.000 0.00 0.0 35.83 3.69 R
3255 3290 0.861837 GCACACACACGAAAGAGAGG 59.138 55.000 0.00 0.0 0.00 3.69 R
3931 3988 0.109039 ACCACACACGCAACCAAAAC 60.109 50.000 0.00 0.0 0.00 2.43 R
5018 5189 0.669318 CGAGTTTAACAGGCTGGCGA 60.669 55.000 20.34 0.0 0.00 5.54 R
6073 6400 0.941542 TGGAAAGTAGTTGCGTGTGC 59.058 50.000 0.00 0.0 43.20 4.57 R
6075 6402 2.552315 CCATTGGAAAGTAGTTGCGTGT 59.448 45.455 0.00 0.0 0.00 4.49 R
7010 7350 0.178992 TTCCACAGGCACAAGAAGGG 60.179 55.000 0.00 0.0 0.00 3.95 R
8031 10181 0.036010 CCGTGGAGTGCTGGATTTCT 60.036 55.000 0.00 0.0 0.00 2.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
60 61 4.039609 CCTATTCATTTGATCTTTGGCCCC 59.960 45.833 0.00 0.00 0.00 5.80
78 79 4.469657 GCCCCACCATATATTCTTGTCAA 58.530 43.478 0.00 0.00 0.00 3.18
79 80 4.520492 GCCCCACCATATATTCTTGTCAAG 59.480 45.833 6.21 6.21 0.00 3.02
81 82 5.380043 CCCACCATATATTCTTGTCAAGCT 58.620 41.667 7.78 0.66 0.00 3.74
82 83 5.829924 CCCACCATATATTCTTGTCAAGCTT 59.170 40.000 7.78 0.00 0.00 3.74
83 84 6.016777 CCCACCATATATTCTTGTCAAGCTTC 60.017 42.308 7.78 0.00 0.00 3.86
84 85 6.543465 CCACCATATATTCTTGTCAAGCTTCA 59.457 38.462 7.78 0.00 0.00 3.02
86 87 6.543831 ACCATATATTCTTGTCAAGCTTCACC 59.456 38.462 7.78 0.00 0.00 4.02
88 89 5.886960 ATATTCTTGTCAAGCTTCACCAC 57.113 39.130 7.78 0.00 0.00 4.16
91 92 2.092968 TCTTGTCAAGCTTCACCACTGT 60.093 45.455 7.78 0.00 0.00 3.55
92 93 3.133901 TCTTGTCAAGCTTCACCACTGTA 59.866 43.478 7.78 0.00 0.00 2.74
93 94 3.769739 TGTCAAGCTTCACCACTGTAT 57.230 42.857 0.00 0.00 0.00 2.29
94 95 3.402110 TGTCAAGCTTCACCACTGTATG 58.598 45.455 0.00 0.00 0.00 2.39
95 96 3.181455 TGTCAAGCTTCACCACTGTATGT 60.181 43.478 0.00 0.00 0.00 2.29
96 97 3.187227 GTCAAGCTTCACCACTGTATGTG 59.813 47.826 0.00 3.88 45.80 3.21
112 113 2.672961 TGTGAGGCTTACGATCCAAG 57.327 50.000 4.87 0.00 0.00 3.61
137 138 7.566879 AGTGATATTCTAACACTCCTCCTCAAT 59.433 37.037 0.00 0.00 40.19 2.57
138 139 8.861086 GTGATATTCTAACACTCCTCCTCAATA 58.139 37.037 0.00 0.00 0.00 1.90
139 140 9.434275 TGATATTCTAACACTCCTCCTCAATAA 57.566 33.333 0.00 0.00 0.00 1.40
195 196 4.817517 ACTTCAAGATACCGTACCAACAG 58.182 43.478 0.00 0.00 0.00 3.16
240 241 5.964958 AGTTGACCACCAAATGATTGTAG 57.035 39.130 0.00 0.00 36.36 2.74
268 269 4.157817 GCAATTTGCTCGCCACAG 57.842 55.556 14.11 0.00 40.96 3.66
279 280 3.840437 GCCACAGGCTCAACACAA 58.160 55.556 0.00 0.00 46.69 3.33
294 295 5.948588 TCAACACAAAATGATAATCCACCG 58.051 37.500 0.00 0.00 0.00 4.94
295 296 4.370364 ACACAAAATGATAATCCACCGC 57.630 40.909 0.00 0.00 0.00 5.68
333 334 5.702670 TGGTCATGAAAGATTGAGTTGACTC 59.297 40.000 0.00 4.20 43.15 3.36
354 355 2.627699 CACAAATATGCCGCCCCTAAAT 59.372 45.455 0.00 0.00 0.00 1.40
374 375 6.500684 AAATTATCACACCATGACACTGTC 57.499 37.500 1.86 1.86 41.24 3.51
422 423 4.821805 CCCTTGAGCAAAAACTTAGTGAGA 59.178 41.667 0.00 0.00 0.00 3.27
474 475 1.202722 TCGTTTCCCTTTTCCTTCGCT 60.203 47.619 0.00 0.00 0.00 4.93
528 529 4.082354 AGTGTAACATCCTCTACGTTGGTC 60.082 45.833 0.00 0.00 41.43 4.02
530 531 1.933021 ACATCCTCTACGTTGGTCCA 58.067 50.000 0.00 0.00 0.00 4.02
544 545 1.628846 TGGTCCAACCTTCTAGCCTTC 59.371 52.381 0.00 0.00 39.58 3.46
548 549 1.909302 CCAACCTTCTAGCCTTCCTCA 59.091 52.381 0.00 0.00 0.00 3.86
566 567 0.030504 CAGGCACACATTGTTTCGCA 59.969 50.000 4.73 0.00 0.00 5.10
571 572 2.191802 CACACATTGTTTCGCAAAGCA 58.808 42.857 0.00 0.00 40.91 3.91
625 626 1.962570 GCCCTCCTCTCCCCCTCTTA 61.963 65.000 0.00 0.00 0.00 2.10
675 679 1.296715 CTTCCACCCTCAACCCTCG 59.703 63.158 0.00 0.00 0.00 4.63
751 758 8.477419 AAAAACTGACCAATTTATCCTCTCAA 57.523 30.769 0.00 0.00 0.00 3.02
862 869 7.997107 TTACAAATGATACCTGACGTGATAC 57.003 36.000 0.00 0.00 0.00 2.24
893 900 4.748798 AGTAGCCCCTGCCCAGCT 62.749 66.667 0.00 0.00 40.66 4.24
928 943 2.422127 ACTGTTCGGCCCATTTTTATCG 59.578 45.455 0.00 0.00 0.00 2.92
934 950 0.736053 GCCCATTTTTATCGCGGTCA 59.264 50.000 6.13 0.00 0.00 4.02
953 970 3.500635 CCCTTCAGTTCCTGGGCT 58.499 61.111 0.00 0.00 32.49 5.19
972 989 1.447314 GGTCCGTCGGGCTTACTTG 60.447 63.158 16.83 0.00 0.00 3.16
973 990 1.447314 GTCCGTCGGGCTTACTTGG 60.447 63.158 9.10 0.00 0.00 3.61
980 997 2.043953 GGCTTACTTGGGGGCAGG 60.044 66.667 0.00 0.00 0.00 4.85
1140 1159 0.761802 GGGAAATGCTCGATCCTCCT 59.238 55.000 2.20 0.00 33.61 3.69
1426 1448 1.511850 CGATGGTTTCTGCAGTGTGA 58.488 50.000 14.67 0.00 0.00 3.58
1431 1453 0.947244 GTTTCTGCAGTGTGAGTGGG 59.053 55.000 14.67 0.00 0.00 4.61
1455 1477 2.153366 AAAATTGCCGCTGTTGAAGG 57.847 45.000 0.00 0.00 0.00 3.46
1484 1506 2.885135 TACGGAGTAAGTCTGGGTGA 57.115 50.000 0.00 0.00 41.63 4.02
1497 1519 0.538584 TGGGTGATCTGCTGCTAGTG 59.461 55.000 0.00 0.00 0.00 2.74
1510 1532 1.661341 GCTAGTGCAAGAGGATGGTG 58.339 55.000 0.00 0.00 39.41 4.17
1521 1543 5.678583 CAAGAGGATGGTGTTCTGTGATAT 58.321 41.667 0.00 0.00 0.00 1.63
1557 1579 0.972471 TCAGCGATCCAGCAGAGGAA 60.972 55.000 0.00 0.00 41.92 3.36
1620 1642 7.394016 TGTTGGATCTTGTTATAGCTTCAGAA 58.606 34.615 0.00 0.00 0.00 3.02
1635 1657 5.985530 AGCTTCAGAAAGTTTGTTATTTGCC 59.014 36.000 0.00 0.00 34.79 4.52
1705 1727 3.137913 AGAGGTATCAGATGCCATGCTTT 59.862 43.478 18.93 0.00 37.52 3.51
1708 1730 2.447408 ATCAGATGCCATGCTTTCCA 57.553 45.000 0.00 0.00 0.00 3.53
1714 1736 0.111061 TGCCATGCTTTCCACAGAGT 59.889 50.000 0.00 0.00 0.00 3.24
1715 1737 0.524862 GCCATGCTTTCCACAGAGTG 59.475 55.000 0.00 0.00 0.00 3.51
1720 1742 0.871057 GCTTTCCACAGAGTGCACTC 59.129 55.000 34.82 34.82 43.17 3.51
1733 1755 2.101249 AGTGCACTCAAAATGTTGTGGG 59.899 45.455 15.25 0.00 35.23 4.61
1740 1764 3.379452 TCAAAATGTTGTGGGGGAGTTT 58.621 40.909 0.00 0.00 36.07 2.66
1750 1774 1.377202 GGGGAGTTTGCAGCGATGA 60.377 57.895 4.02 0.00 0.00 2.92
1766 1790 4.872691 AGCGATGAGAAATACTTGGAACAG 59.127 41.667 0.00 0.00 42.39 3.16
1834 1858 4.037858 GCTTCTGCAATTATTGGACCAG 57.962 45.455 7.08 5.99 39.41 4.00
1855 1879 3.202818 AGGAGGTGTCAAATGCCATATGA 59.797 43.478 3.65 0.00 0.00 2.15
1870 1894 3.881688 CCATATGACTTCCAAGCTTCTGG 59.118 47.826 3.65 0.00 37.87 3.86
1916 1941 4.908601 TGGAGTTAGCAATGAGAGGAAA 57.091 40.909 0.00 0.00 0.00 3.13
1919 1944 6.586344 TGGAGTTAGCAATGAGAGGAAATAG 58.414 40.000 0.00 0.00 0.00 1.73
1935 1960 7.829706 AGAGGAAATAGTTGGAAGAATAACACC 59.170 37.037 0.00 0.00 0.00 4.16
1940 1965 8.650143 AATAGTTGGAAGAATAACACCATTGT 57.350 30.769 0.00 0.00 37.67 2.71
1948 1973 6.500684 AGAATAACACCATTGTAGCAACTG 57.499 37.500 0.00 0.00 33.55 3.16
1950 1975 5.880054 ATAACACCATTGTAGCAACTGAC 57.120 39.130 0.00 0.00 33.55 3.51
1967 1996 1.421268 TGACAAGAGCACCATTGGAGT 59.579 47.619 10.37 0.00 0.00 3.85
1985 2014 4.947388 TGGAGTTTATACAAAGTGGCATCC 59.053 41.667 0.00 0.00 0.00 3.51
2019 2050 2.047061 AGTTACTTGTGGTGGCTGAGA 58.953 47.619 0.00 0.00 0.00 3.27
2108 2139 7.463544 TGATATTTTCTTTACATGTGCAGACG 58.536 34.615 9.11 0.00 0.00 4.18
2150 2182 8.341903 CAGTTGTGTCATGTCTTGTTGTATTAA 58.658 33.333 0.00 0.00 0.00 1.40
2197 2229 8.622157 TCCTTTCGATATAGTAGTTGAACTGAG 58.378 37.037 8.33 0.00 0.00 3.35
2219 2251 3.005155 GGTCAAAGCTTCTTGCAGAACAT 59.995 43.478 0.00 0.00 45.94 2.71
2337 2369 3.100817 CGTCCTATTTGCATTGCTTTCG 58.899 45.455 10.49 0.71 0.00 3.46
2396 2428 0.107643 GGCCATCCTCTTACCAGAGC 59.892 60.000 0.00 0.00 44.96 4.09
2471 2503 6.811253 AGTTCAGTTTGCGAAAACCATATA 57.189 33.333 15.60 0.00 33.28 0.86
2472 2504 7.391148 AGTTCAGTTTGCGAAAACCATATAT 57.609 32.000 15.60 0.00 33.28 0.86
2486 2518 9.101655 GAAAACCATATATTTCAGCTTTGCAAT 57.898 29.630 0.00 0.00 35.96 3.56
2562 2594 0.524862 GCCTGTCATTCCAAGTGCTG 59.475 55.000 0.00 0.00 0.00 4.41
2630 2662 8.409358 ACAAGTGAAATTAGATTTACTTGGCT 57.591 30.769 21.13 6.06 41.54 4.75
2926 2960 1.667236 TGTGTGTTGCCTTGTCTCTG 58.333 50.000 0.00 0.00 0.00 3.35
2940 2974 6.511416 CCTTGTCTCTGTATAACTCCATCTG 58.489 44.000 0.00 0.00 0.00 2.90
2965 2999 3.128349 TCGCAGTGGTGTAGTTTCTTTC 58.872 45.455 0.00 0.00 0.00 2.62
3255 3290 2.948315 ACGTTCTCGAGGTAGGGATAAC 59.052 50.000 13.56 5.97 40.62 1.89
3276 3313 1.524355 CTCTCTTTCGTGTGTGTGCAG 59.476 52.381 0.00 0.00 0.00 4.41
3277 3314 0.041839 CTCTTTCGTGTGTGTGCAGC 60.042 55.000 0.00 0.00 0.00 5.25
3429 3474 4.412199 CCCCATCAGGAAGAGGTATGTAAA 59.588 45.833 0.00 0.00 38.24 2.01
3459 3504 6.820335 TCTCAGTGTATTCCATTCCAGTATG 58.180 40.000 0.00 0.00 0.00 2.39
3487 3532 7.444487 GGTCTTTGTTATCCACTCAGTTAACTT 59.556 37.037 5.07 0.00 0.00 2.66
3549 3606 3.652869 TGGATTTTCCAGTGAGAGAAGGT 59.347 43.478 0.00 0.00 42.67 3.50
3558 3615 4.159506 CCAGTGAGAGAAGGTCTAAGAAGG 59.840 50.000 0.00 0.00 34.71 3.46
3572 3629 6.154706 GGTCTAAGAAGGAAGTAGATGGTGAA 59.845 42.308 0.00 0.00 0.00 3.18
3655 3712 3.262660 AGACATTCCAGCAGTGATGAGAA 59.737 43.478 10.64 11.84 0.00 2.87
3656 3713 3.607741 ACATTCCAGCAGTGATGAGAAG 58.392 45.455 10.64 8.22 0.00 2.85
3657 3714 2.775911 TTCCAGCAGTGATGAGAAGG 57.224 50.000 10.64 0.00 0.00 3.46
3658 3715 1.942776 TCCAGCAGTGATGAGAAGGA 58.057 50.000 10.64 0.00 0.00 3.36
3659 3716 2.475155 TCCAGCAGTGATGAGAAGGAT 58.525 47.619 10.64 0.00 0.00 3.24
3660 3717 2.169978 TCCAGCAGTGATGAGAAGGATG 59.830 50.000 10.64 0.00 0.00 3.51
3661 3718 2.169978 CCAGCAGTGATGAGAAGGATGA 59.830 50.000 10.64 0.00 0.00 2.92
3662 3719 3.459145 CAGCAGTGATGAGAAGGATGAG 58.541 50.000 0.98 0.00 0.00 2.90
3663 3720 3.132467 CAGCAGTGATGAGAAGGATGAGA 59.868 47.826 0.98 0.00 0.00 3.27
3674 3731 2.166907 AGGATGAGAAGGATGACGGT 57.833 50.000 0.00 0.00 0.00 4.83
3744 3801 3.387962 AGCTGTCTCCATATTCCTGGAA 58.612 45.455 12.26 12.26 44.59 3.53
3746 3803 3.722147 CTGTCTCCATATTCCTGGAACG 58.278 50.000 12.11 3.38 44.59 3.95
3822 3879 6.982141 TGAAAGCATTGCATGAAGATAAATCC 59.018 34.615 11.91 0.00 0.00 3.01
3838 3895 7.106239 AGATAAATCCAAACTACAGGTCAGTG 58.894 38.462 0.00 0.00 0.00 3.66
3839 3896 4.706842 AATCCAAACTACAGGTCAGTGT 57.293 40.909 0.00 0.00 34.21 3.55
3843 3900 4.080807 TCCAAACTACAGGTCAGTGTTCAA 60.081 41.667 0.00 0.00 31.46 2.69
3925 3982 5.579511 ACGGCACACACTTATCAGTTATTAC 59.420 40.000 0.00 0.00 0.00 1.89
3942 3999 6.797995 AGTTATTACGTTATGTTTTGGTTGCG 59.202 34.615 0.00 0.00 0.00 4.85
3958 4015 0.749818 TGCGTGTGTGGTTCCAACAT 60.750 50.000 0.00 0.00 0.00 2.71
3992 4049 4.013267 ACTAGATAGTTGATGCATGCCC 57.987 45.455 16.68 7.77 31.13 5.36
4092 4150 4.441217 GGAAGGTACTACCGATGTTTCTCC 60.441 50.000 0.00 0.00 44.90 3.71
4098 4156 0.905357 ACCGATGTTTCTCCCTCCAG 59.095 55.000 0.00 0.00 0.00 3.86
4139 4302 8.969260 ACTAATGAGTAATCATTCATGCTTGA 57.031 30.769 20.78 0.00 40.42 3.02
4152 4315 7.911727 TCATTCATGCTTGAGAAAATATTGACG 59.088 33.333 2.23 0.00 32.27 4.35
4155 4318 6.371271 TCATGCTTGAGAAAATATTGACGTGA 59.629 34.615 0.00 0.00 0.00 4.35
4158 4321 6.426633 TGCTTGAGAAAATATTGACGTGAGAA 59.573 34.615 0.00 0.00 0.00 2.87
4177 4340 4.392047 AGAACATGCTCTGATTGAACACA 58.608 39.130 0.00 0.00 0.00 3.72
4190 4353 6.533730 TGATTGAACACAGAGATAACCAGTT 58.466 36.000 0.00 0.00 0.00 3.16
4193 4356 3.703001 ACACAGAGATAACCAGTTGGG 57.297 47.619 2.79 0.00 44.81 4.12
4195 4358 2.026822 CACAGAGATAACCAGTTGGGCT 60.027 50.000 2.79 0.00 42.05 5.19
4196 4359 2.026822 ACAGAGATAACCAGTTGGGCTG 60.027 50.000 2.79 0.00 44.63 4.85
4197 4360 2.026822 CAGAGATAACCAGTTGGGCTGT 60.027 50.000 2.79 0.00 43.55 4.40
4198 4361 2.237392 AGAGATAACCAGTTGGGCTGTC 59.763 50.000 2.79 0.00 43.55 3.51
4199 4362 1.985159 AGATAACCAGTTGGGCTGTCA 59.015 47.619 2.79 0.00 43.55 3.58
4200 4363 2.084546 GATAACCAGTTGGGCTGTCAC 58.915 52.381 2.79 0.00 43.55 3.67
4202 4365 0.033601 AACCAGTTGGGCTGTCACAA 60.034 50.000 2.79 0.00 43.55 3.33
4203 4366 0.033601 ACCAGTTGGGCTGTCACAAA 60.034 50.000 2.79 0.00 43.55 2.83
4243 4406 5.165961 TCTTGAACTTCTCTGGGTTATGG 57.834 43.478 0.00 0.00 0.00 2.74
4276 4439 9.520515 ACTTTCATATAGTTGTGGTTGAGATTT 57.479 29.630 0.00 0.00 0.00 2.17
4285 4448 8.553459 AGTTGTGGTTGAGATTTCTACAATAG 57.447 34.615 0.66 0.00 31.74 1.73
4286 4449 6.985188 TGTGGTTGAGATTTCTACAATAGC 57.015 37.500 0.66 0.00 31.74 2.97
4287 4450 5.880332 TGTGGTTGAGATTTCTACAATAGCC 59.120 40.000 0.66 0.00 31.74 3.93
4288 4451 6.116126 GTGGTTGAGATTTCTACAATAGCCT 58.884 40.000 0.66 0.00 31.74 4.58
4289 4452 6.599638 GTGGTTGAGATTTCTACAATAGCCTT 59.400 38.462 0.66 0.00 31.74 4.35
4290 4453 7.121315 GTGGTTGAGATTTCTACAATAGCCTTT 59.879 37.037 0.66 0.00 31.74 3.11
4335 4504 8.246871 ACATACTATCACAGATGATATTGGACG 58.753 37.037 0.00 0.00 44.94 4.79
4500 4669 3.584834 GACTCTTCAGTTCAGGAGAAGC 58.415 50.000 0.00 0.00 38.83 3.86
4532 4701 8.904099 AGTATTTGGTTATTGATAGTACTGCC 57.096 34.615 5.39 0.00 0.00 4.85
4533 4702 8.714906 AGTATTTGGTTATTGATAGTACTGCCT 58.285 33.333 5.39 0.00 0.00 4.75
4624 4793 7.388500 CACAGGATGATTTAAAAAGGCATGTTT 59.612 33.333 0.00 0.00 39.69 2.83
4639 4808 6.449698 AGGCATGTTTCTTTTATGTGAACTG 58.550 36.000 0.00 0.00 0.00 3.16
4675 4844 9.868277 TTTATTTCATTTGGATCACCACATAAC 57.132 29.630 0.00 0.00 46.80 1.89
4681 4850 2.017049 GGATCACCACATAACTGCACC 58.983 52.381 0.00 0.00 35.97 5.01
4721 4890 8.158169 TGACATGATTTTCATAGCTATTGACC 57.842 34.615 2.64 0.00 34.28 4.02
4771 4940 3.507162 TTTGAGAGGTTGGCTGATTCA 57.493 42.857 0.00 0.00 0.00 2.57
4813 4982 4.724279 ATCTGGTACCAAAGAACAAGGT 57.276 40.909 17.11 0.00 39.41 3.50
4873 5042 5.686159 CTTATGAAATGAGCCCAGATGAC 57.314 43.478 0.00 0.00 0.00 3.06
4879 5048 3.746949 GAGCCCAGATGACCAGCGG 62.747 68.421 0.00 0.00 0.00 5.52
4967 5138 4.850680 TGGTAACACCTTGAAGAACTTGT 58.149 39.130 0.00 0.00 46.17 3.16
5018 5189 5.648092 AGCATTTTTCTAGCCATCTTAACGT 59.352 36.000 0.00 0.00 0.00 3.99
5021 5192 2.486951 TCTAGCCATCTTAACGTCGC 57.513 50.000 0.00 0.00 0.00 5.19
5044 5215 4.304110 CAGCCTGTTAAACTCGTTACTGA 58.696 43.478 0.00 0.00 0.00 3.41
5048 5219 6.757010 AGCCTGTTAAACTCGTTACTGATATG 59.243 38.462 0.00 0.00 0.00 1.78
5131 5404 7.339721 TGTGTCCACAAGGTATTCAAGTTAAAA 59.660 33.333 0.00 0.00 38.56 1.52
5132 5405 8.192110 GTGTCCACAAGGTATTCAAGTTAAAAA 58.808 33.333 0.00 0.00 35.89 1.94
5133 5406 8.919145 TGTCCACAAGGTATTCAAGTTAAAAAT 58.081 29.630 0.00 0.00 35.89 1.82
5134 5407 9.191995 GTCCACAAGGTATTCAAGTTAAAAATG 57.808 33.333 0.00 0.00 35.89 2.32
5135 5408 8.364142 TCCACAAGGTATTCAAGTTAAAAATGG 58.636 33.333 0.00 0.00 35.89 3.16
5137 5410 7.655328 CACAAGGTATTCAAGTTAAAAATGGCA 59.345 33.333 0.00 0.00 0.00 4.92
5139 5412 6.697395 AGGTATTCAAGTTAAAAATGGCACC 58.303 36.000 0.00 0.00 0.00 5.01
5140 5413 5.872617 GGTATTCAAGTTAAAAATGGCACCC 59.127 40.000 0.00 0.00 0.00 4.61
5141 5414 3.651803 TCAAGTTAAAAATGGCACCCG 57.348 42.857 0.00 0.00 0.00 5.28
5142 5415 2.297597 TCAAGTTAAAAATGGCACCCGG 59.702 45.455 0.00 0.00 0.00 5.73
5143 5416 2.003937 AGTTAAAAATGGCACCCGGT 57.996 45.000 0.00 0.00 0.00 5.28
5144 5417 2.321719 AGTTAAAAATGGCACCCGGTT 58.678 42.857 0.00 0.00 0.00 4.44
5151 5424 5.485209 AAAATGGCACCCGGTTAATTTTA 57.515 34.783 0.00 0.00 0.00 1.52
5183 5456 8.705594 TGTTGAACCCATTTGTCCTTTAAAATA 58.294 29.630 0.00 0.00 0.00 1.40
5208 5481 3.963383 ATGTTTCTTGTTCGGACACAC 57.037 42.857 0.00 0.00 34.98 3.82
5209 5482 1.661617 TGTTTCTTGTTCGGACACACG 59.338 47.619 0.00 0.00 34.98 4.49
5244 5521 7.289310 TGTCTTGAATATTATGCATTCCCTGA 58.711 34.615 3.54 0.00 32.46 3.86
5272 5549 4.122143 TGTGCCAACAAAGGAAAGAAAG 57.878 40.909 0.00 0.00 31.82 2.62
5312 5590 7.899178 AAAAACTGTTGTTACTTTTTCAGGG 57.101 32.000 0.00 0.00 34.96 4.45
5334 5612 5.280521 GGGAAGAAAAGGAGAGTGAATGGTA 60.281 44.000 0.00 0.00 0.00 3.25
5348 5626 8.833734 AGAGTGAATGGTAATGATATGATCCAT 58.166 33.333 0.00 0.00 37.28 3.41
5352 5630 7.121611 TGAATGGTAATGATATGATCCATGTGC 59.878 37.037 0.00 0.00 36.09 4.57
5355 5633 5.124457 GGTAATGATATGATCCATGTGCCAC 59.876 44.000 0.00 0.00 0.00 5.01
5361 5639 0.451783 GATCCATGTGCCACGGAAAC 59.548 55.000 0.00 0.00 31.18 2.78
5365 5643 2.023673 CCATGTGCCACGGAAACATAT 58.976 47.619 4.95 0.00 33.31 1.78
5367 5645 3.003275 CCATGTGCCACGGAAACATATAC 59.997 47.826 4.95 0.00 33.31 1.47
5371 5649 2.218603 GCCACGGAAACATATACCAGG 58.781 52.381 0.00 0.00 0.00 4.45
5374 5652 3.494398 CCACGGAAACATATACCAGGAGG 60.494 52.174 0.00 0.00 42.21 4.30
5388 5666 2.297701 CAGGAGGTGCTCTAGAGTCTC 58.702 57.143 20.75 21.05 0.00 3.36
5390 5668 2.580783 AGGAGGTGCTCTAGAGTCTCTT 59.419 50.000 24.88 19.84 0.00 2.85
5402 5680 9.541143 GCTCTAGAGTCTCTTAAAAATAGCAAT 57.459 33.333 20.75 0.00 0.00 3.56
5420 5698 5.319453 AGCAATGGAACTGAATCTCTGAAA 58.681 37.500 0.00 0.00 0.00 2.69
5516 5794 7.960262 TGAGTATATTTCTCACAGCAGATCAT 58.040 34.615 0.00 0.00 37.07 2.45
5517 5795 9.082313 TGAGTATATTTCTCACAGCAGATCATA 57.918 33.333 0.00 0.00 37.07 2.15
5522 5800 5.746307 TTCTCACAGCAGATCATATTTGC 57.254 39.130 0.00 0.00 38.09 3.68
5524 5802 4.814771 TCTCACAGCAGATCATATTTGCAG 59.185 41.667 6.65 1.38 40.22 4.41
5525 5803 3.314357 TCACAGCAGATCATATTTGCAGC 59.686 43.478 6.65 0.00 40.22 5.25
5526 5804 2.621998 ACAGCAGATCATATTTGCAGCC 59.378 45.455 6.65 0.00 40.22 4.85
5527 5805 2.621526 CAGCAGATCATATTTGCAGCCA 59.378 45.455 6.65 0.00 40.22 4.75
5528 5806 3.067601 CAGCAGATCATATTTGCAGCCAA 59.932 43.478 6.65 0.00 40.22 4.52
5529 5807 3.895656 AGCAGATCATATTTGCAGCCAAT 59.104 39.130 6.65 0.00 40.22 3.16
5570 5848 9.499479 ACATGAATGTTATTAGGCAGAGATAAG 57.501 33.333 0.00 0.00 37.90 1.73
5656 5943 5.767816 AAGTTACAGGCTACTTTTGGTTG 57.232 39.130 0.00 0.00 30.72 3.77
5707 6020 6.942976 TCTAGGTGTAGTTCATTTGGTTAGG 58.057 40.000 0.00 0.00 0.00 2.69
5708 6021 5.578157 AGGTGTAGTTCATTTGGTTAGGT 57.422 39.130 0.00 0.00 0.00 3.08
5717 6030 8.257602 AGTTCATTTGGTTAGGTTTATGGTTT 57.742 30.769 0.00 0.00 0.00 3.27
5745 6068 3.136443 CCTGCATGTCATCTAGGGGTTAA 59.864 47.826 0.00 0.00 0.00 2.01
5746 6069 4.385199 CCTGCATGTCATCTAGGGGTTAAA 60.385 45.833 0.00 0.00 0.00 1.52
5747 6070 4.523083 TGCATGTCATCTAGGGGTTAAAC 58.477 43.478 0.00 0.00 0.00 2.01
5748 6071 4.227300 TGCATGTCATCTAGGGGTTAAACT 59.773 41.667 0.00 0.00 0.00 2.66
5749 6072 4.576463 GCATGTCATCTAGGGGTTAAACTG 59.424 45.833 0.00 0.00 0.00 3.16
5750 6073 5.629133 GCATGTCATCTAGGGGTTAAACTGA 60.629 44.000 0.00 0.00 0.00 3.41
5751 6074 6.595682 CATGTCATCTAGGGGTTAAACTGAT 58.404 40.000 0.00 0.00 0.00 2.90
5752 6075 7.689313 GCATGTCATCTAGGGGTTAAACTGATA 60.689 40.741 0.00 0.00 0.00 2.15
5753 6076 7.120923 TGTCATCTAGGGGTTAAACTGATAC 57.879 40.000 0.00 0.00 0.00 2.24
5754 6077 6.670464 TGTCATCTAGGGGTTAAACTGATACA 59.330 38.462 0.00 0.00 0.00 2.29
5755 6078 7.347222 TGTCATCTAGGGGTTAAACTGATACAT 59.653 37.037 0.00 0.00 0.00 2.29
5756 6079 7.873505 GTCATCTAGGGGTTAAACTGATACATC 59.126 40.741 0.00 0.00 0.00 3.06
5757 6080 6.401047 TCTAGGGGTTAAACTGATACATCG 57.599 41.667 0.00 0.00 0.00 3.84
5758 6081 3.805207 AGGGGTTAAACTGATACATCGC 58.195 45.455 0.00 0.00 0.00 4.58
5759 6082 2.876550 GGGGTTAAACTGATACATCGCC 59.123 50.000 0.00 0.00 0.00 5.54
5780 6103 5.393787 CGCCACTTACAGGTAGAATGTTCTA 60.394 44.000 0.00 0.00 38.70 2.10
5785 6108 7.971168 CACTTACAGGTAGAATGTTCTAGAGTG 59.029 40.741 2.82 7.11 40.23 3.51
5790 6113 5.038033 GGTAGAATGTTCTAGAGTGAAGCG 58.962 45.833 2.82 0.00 40.23 4.68
5796 6119 3.318275 TGTTCTAGAGTGAAGCGTGTTCT 59.682 43.478 0.00 0.00 0.00 3.01
5803 6126 2.101582 AGTGAAGCGTGTTCTGTTCTCT 59.898 45.455 2.04 0.00 0.00 3.10
5804 6127 2.219674 GTGAAGCGTGTTCTGTTCTCTG 59.780 50.000 2.04 0.00 0.00 3.35
5820 6143 5.414765 TGTTCTCTGCTGATCTAGTTAACGA 59.585 40.000 0.00 0.00 0.00 3.85
5831 6154 7.478322 TGATCTAGTTAACGATGTAGTTGGTC 58.522 38.462 0.00 0.00 35.70 4.02
5837 6160 3.314541 ACGATGTAGTTGGTCCTGTTC 57.685 47.619 0.00 0.00 0.00 3.18
5845 6168 5.654650 TGTAGTTGGTCCTGTTCAAATTGTT 59.345 36.000 0.00 0.00 0.00 2.83
5846 6169 5.009854 AGTTGGTCCTGTTCAAATTGTTG 57.990 39.130 0.00 0.00 35.95 3.33
5939 6262 3.025978 ACAAATGATGTGGGCTGTATGG 58.974 45.455 0.00 0.00 41.93 2.74
5941 6264 0.552363 ATGATGTGGGCTGTATGGCA 59.448 50.000 0.00 0.00 43.83 4.92
5950 6273 3.834813 TGGGCTGTATGGCATTTTGTTTA 59.165 39.130 4.78 0.00 43.83 2.01
5986 6313 3.754965 CACCTCCAATGAGTCCAAAAGA 58.245 45.455 0.00 0.00 36.86 2.52
6018 6345 9.807649 GTATCTTCATTTTCCAAGCAATAACAT 57.192 29.630 0.00 0.00 0.00 2.71
6040 6367 7.226441 ACATGCTTGGTCATATAAATAGCTGA 58.774 34.615 0.00 0.00 0.00 4.26
6041 6368 7.173907 ACATGCTTGGTCATATAAATAGCTGAC 59.826 37.037 0.00 0.00 37.79 3.51
6042 6369 5.696270 TGCTTGGTCATATAAATAGCTGACG 59.304 40.000 0.00 0.00 39.08 4.35
6043 6370 5.389935 GCTTGGTCATATAAATAGCTGACGC 60.390 44.000 0.00 0.00 39.08 5.19
6044 6371 5.208463 TGGTCATATAAATAGCTGACGCA 57.792 39.130 0.00 0.00 39.08 5.24
6045 6372 5.606505 TGGTCATATAAATAGCTGACGCAA 58.393 37.500 0.00 0.00 39.08 4.85
6046 6373 5.696270 TGGTCATATAAATAGCTGACGCAAG 59.304 40.000 0.00 0.00 39.08 4.01
6060 6387 2.825086 CGCAAGTACTTACCAATGGC 57.175 50.000 8.04 4.82 0.00 4.40
6061 6388 2.356135 CGCAAGTACTTACCAATGGCT 58.644 47.619 8.04 0.00 0.00 4.75
6062 6389 2.095853 CGCAAGTACTTACCAATGGCTG 59.904 50.000 8.04 0.00 0.00 4.85
6072 6399 2.727123 CCAATGGCTGGTGTACCATA 57.273 50.000 3.88 0.00 46.04 2.74
6073 6400 2.575532 CCAATGGCTGGTGTACCATAG 58.424 52.381 3.88 0.00 46.04 2.23
6074 6401 1.949525 CAATGGCTGGTGTACCATAGC 59.050 52.381 3.88 5.52 46.04 2.97
6075 6402 1.212375 ATGGCTGGTGTACCATAGCA 58.788 50.000 14.72 4.56 44.92 3.49
6076 6403 0.251916 TGGCTGGTGTACCATAGCAC 59.748 55.000 14.72 7.03 46.46 4.40
6090 6417 3.181520 CCATAGCACACGCAACTACTTTC 60.182 47.826 0.00 0.00 42.27 2.62
6104 6431 2.086610 ACTTTCCAATGGCTGGTGTT 57.913 45.000 0.00 0.00 46.51 3.32
6114 6441 0.749454 GGCTGGTGTTCCATAGCAGG 60.749 60.000 0.00 0.00 43.43 4.85
6166 6493 1.196354 CTGTCAGCACAGCAGCTTAAC 59.804 52.381 0.00 0.00 43.70 2.01
6169 6496 2.291741 GTCAGCACAGCAGCTTAACTTT 59.708 45.455 0.00 0.00 43.70 2.66
6183 6510 4.217550 GCTTAACTTTGGCATGTCCTGTAA 59.782 41.667 0.00 0.00 35.26 2.41
6190 6517 6.663093 ACTTTGGCATGTCCTGTAAAATCATA 59.337 34.615 0.00 0.00 35.26 2.15
6192 6519 7.658525 TTGGCATGTCCTGTAAAATCATATT 57.341 32.000 0.00 0.00 35.26 1.28
6193 6520 7.275888 TGGCATGTCCTGTAAAATCATATTC 57.724 36.000 0.00 0.00 35.26 1.75
6225 6552 5.464168 GCATTTGCAAAGATCTGTTACTGT 58.536 37.500 18.19 0.00 41.59 3.55
6227 6554 7.083858 GCATTTGCAAAGATCTGTTACTGTAA 58.916 34.615 18.19 0.00 41.59 2.41
6228 6555 7.756722 GCATTTGCAAAGATCTGTTACTGTAAT 59.243 33.333 18.19 0.00 41.59 1.89
6232 6559 9.665719 TTGCAAAGATCTGTTACTGTAATATGA 57.334 29.630 0.00 3.57 0.00 2.15
6233 6560 9.836864 TGCAAAGATCTGTTACTGTAATATGAT 57.163 29.630 3.23 7.79 0.00 2.45
6240 6567 8.541899 TCTGTTACTGTAATATGATACCACCA 57.458 34.615 3.23 0.00 0.00 4.17
6289 6622 8.499403 ACTCTGCAAGAATTTTAGAGTATTCC 57.501 34.615 0.00 0.00 46.34 3.01
6329 6664 4.710324 TGGTCCTAGCGGTTTTATTATGG 58.290 43.478 0.00 0.00 0.00 2.74
6334 6669 5.129815 TCCTAGCGGTTTTATTATGGTCAGT 59.870 40.000 0.00 0.00 0.00 3.41
6338 6673 5.238650 AGCGGTTTTATTATGGTCAGTATGC 59.761 40.000 0.00 0.00 34.76 3.14
6353 6688 2.816087 AGTATGCGGATCATTTGCATCC 59.184 45.455 14.59 6.59 45.68 3.51
6396 6731 1.617740 GCAGTCTGCGGCAATTAAAC 58.382 50.000 9.53 0.00 35.86 2.01
6406 6741 3.058639 GCGGCAATTAAACCAATTTGCAA 60.059 39.130 10.45 0.00 34.49 4.08
6417 6752 4.692228 ACCAATTTGCAAAAACTGATCGT 58.308 34.783 17.19 5.19 0.00 3.73
6422 6758 8.281893 CCAATTTGCAAAAACTGATCGTATTTT 58.718 29.630 17.19 0.00 0.00 1.82
6442 6779 5.682943 TTTCAGTTATTCCCGTGTTCTTG 57.317 39.130 0.00 0.00 0.00 3.02
6451 6788 3.547746 TCCCGTGTTCTTGCTACTTTTT 58.452 40.909 0.00 0.00 0.00 1.94
6466 6804 8.840833 TGCTACTTTTTCCTTTTCTTTTTGTT 57.159 26.923 0.00 0.00 0.00 2.83
6527 6865 2.183409 GCAAATGCATCGACAGGGT 58.817 52.632 0.00 0.00 41.59 4.34
6542 6880 2.027100 ACAGGGTTAGCAGCTACTTTCC 60.027 50.000 0.00 2.89 0.00 3.13
6553 6891 2.426381 AGCTACTTTCCGCCAGTACTAC 59.574 50.000 0.00 0.00 0.00 2.73
6559 6897 2.202703 CGCCAGTACTACGTGCCC 60.203 66.667 0.00 0.00 0.00 5.36
6570 6908 2.631428 CGTGCCCGTGTTCTGTTG 59.369 61.111 0.00 0.00 0.00 3.33
6608 6946 6.767423 ACATTTTATGCTCTTTGTTTTTGCCT 59.233 30.769 0.00 0.00 0.00 4.75
6674 7012 2.361610 GGTGGTGGGTGGCAGATG 60.362 66.667 0.00 0.00 0.00 2.90
6680 7018 2.226315 TGGGTGGCAGATGTCAGCT 61.226 57.895 15.38 0.00 46.31 4.24
6711 7049 8.186821 GGAGTTAGATTGAAACATTGAATGGAG 58.813 37.037 10.27 0.00 33.60 3.86
6740 7078 1.989706 GGTGGCTTTGAAACCCAGTA 58.010 50.000 0.00 0.00 0.00 2.74
6746 7084 4.468153 TGGCTTTGAAACCCAGTACTTTTT 59.532 37.500 0.00 0.00 0.00 1.94
6754 7092 8.644374 TGAAACCCAGTACTTTTTGCTATATT 57.356 30.769 0.00 0.00 0.00 1.28
6830 7168 2.066262 TCTGCAGCAGTTAACTTACGC 58.934 47.619 22.10 6.85 32.61 4.42
6841 7179 5.345202 CAGTTAACTTACGCGAAGACAGATT 59.655 40.000 15.93 4.92 38.65 2.40
6845 7183 5.758570 ACTTACGCGAAGACAGATTTTAC 57.241 39.130 15.93 0.00 38.65 2.01
6871 7209 1.137872 TGCCGAAACATGTTTTGCCTT 59.862 42.857 28.90 10.23 33.63 4.35
6874 7212 3.367630 GCCGAAACATGTTTTGCCTTATG 59.632 43.478 26.87 16.05 33.63 1.90
6955 7293 1.839994 CCTATGACAGCCCTTCCTGAA 59.160 52.381 0.00 0.00 36.67 3.02
6956 7294 2.239654 CCTATGACAGCCCTTCCTGAAA 59.760 50.000 0.00 0.00 36.67 2.69
6980 7318 3.207778 TGTTTAGAGGTTTTGACACCCG 58.792 45.455 0.00 0.00 37.58 5.28
7010 7350 5.508224 CGTTACACTGCTGCTATTTTAAAGC 59.492 40.000 0.00 0.00 40.50 3.51
7014 7354 4.082026 CACTGCTGCTATTTTAAAGCCCTT 60.082 41.667 0.00 0.00 39.30 3.95
7047 7390 6.958255 TGTGGAAGTGAAATGCATTATATCG 58.042 36.000 13.39 0.00 0.00 2.92
7113 7456 5.897377 ACTTGAGGGTTACACATTTATGC 57.103 39.130 0.00 0.00 0.00 3.14
7137 7480 6.805271 GCCTCTGTGCTAAATTTATGCATATG 59.195 38.462 18.76 0.00 39.00 1.78
7166 7509 1.143813 ATAGGCCAACCAGGATCCAG 58.856 55.000 15.82 5.70 41.22 3.86
7190 7533 1.614413 CTCCTCTATCCGGTAACTGGC 59.386 57.143 0.00 0.00 0.00 4.85
7197 7540 1.216977 CCGGTAACTGGCGATGACA 59.783 57.895 0.00 0.00 0.00 3.58
7198 7541 0.179084 CCGGTAACTGGCGATGACAT 60.179 55.000 0.00 0.00 0.00 3.06
7307 7652 0.542467 TGGCCATGGCTTCACACAAT 60.542 50.000 34.70 0.00 41.60 2.71
7377 7735 1.372872 GCCAGCGCCGAAATTTTGT 60.373 52.632 2.29 0.00 0.00 2.83
7387 7745 3.123453 GCCGAAATTTTGTGGATTCAAGC 59.877 43.478 4.72 0.00 0.00 4.01
7396 7754 1.470098 GTGGATTCAAGCGCACTGAAT 59.530 47.619 27.84 27.84 35.28 2.57
7402 7760 3.319137 TCAAGCGCACTGAATTCTAGT 57.681 42.857 11.47 5.93 0.00 2.57
7451 7810 8.871629 TTGAATAAAGCTAAGGGTGTAATCAA 57.128 30.769 0.00 0.00 33.03 2.57
7474 7833 0.400594 AGGCTGACCCCACAACTTAC 59.599 55.000 0.00 0.00 36.11 2.34
7485 7844 4.390909 CCCCACAACTTACGTGTAGAATTC 59.609 45.833 0.00 0.00 32.26 2.17
7487 7846 5.347907 CCCACAACTTACGTGTAGAATTCTC 59.652 44.000 12.24 4.68 32.26 2.87
7489 7848 5.628193 CACAACTTACGTGTAGAATTCTCGT 59.372 40.000 20.28 20.28 38.30 4.18
7494 7853 2.729882 ACGTGTAGAATTCTCGTTGCAC 59.270 45.455 12.24 12.60 32.52 4.57
7513 7872 0.597568 CGTCTCCATGCTTGCCAAAA 59.402 50.000 0.00 0.00 0.00 2.44
7519 7878 2.557924 TCCATGCTTGCCAAAACTACTG 59.442 45.455 0.00 0.00 0.00 2.74
7530 7889 3.977427 CAAAACTACTGGGTTTGCTTCC 58.023 45.455 0.00 0.00 44.24 3.46
7531 7890 3.306472 AAACTACTGGGTTTGCTTCCA 57.694 42.857 0.00 0.00 37.91 3.53
7532 7891 3.306472 AACTACTGGGTTTGCTTCCAA 57.694 42.857 0.00 0.00 31.97 3.53
7533 7892 2.583143 ACTACTGGGTTTGCTTCCAAC 58.417 47.619 0.00 0.00 31.97 3.77
7534 7893 2.174854 ACTACTGGGTTTGCTTCCAACT 59.825 45.455 0.00 0.00 31.97 3.16
7535 7894 1.402787 ACTGGGTTTGCTTCCAACTG 58.597 50.000 0.00 0.00 31.97 3.16
7536 7895 1.341976 ACTGGGTTTGCTTCCAACTGT 60.342 47.619 0.00 0.00 31.97 3.55
7537 7896 1.756538 CTGGGTTTGCTTCCAACTGTT 59.243 47.619 0.00 0.00 31.97 3.16
7538 7897 2.168313 CTGGGTTTGCTTCCAACTGTTT 59.832 45.455 0.00 0.00 31.97 2.83
7679 8038 2.169769 GGTCGATGGATTTAGGGTGTGA 59.830 50.000 0.00 0.00 0.00 3.58
7686 8045 3.591527 TGGATTTAGGGTGTGACAAGGAT 59.408 43.478 0.00 0.00 0.00 3.24
7692 8051 4.927267 AGGGTGTGACAAGGATAAATGA 57.073 40.909 0.00 0.00 0.00 2.57
7699 8058 7.552687 GGTGTGACAAGGATAAATGATTGTAGA 59.447 37.037 0.00 0.00 36.08 2.59
7714 8073 2.907634 TGTAGACTTGCAACGGTTTCA 58.092 42.857 0.00 0.00 0.00 2.69
7758 8117 2.047061 TGGAGGTCGATGGATTTAGGG 58.953 52.381 0.00 0.00 0.00 3.53
7805 8164 1.064906 CAAGAGGATGATGGTGTGCCT 60.065 52.381 0.00 0.00 35.27 4.75
7806 8165 0.545171 AGAGGATGATGGTGTGCCTG 59.455 55.000 0.00 0.00 35.27 4.85
7807 8166 1.077212 AGGATGATGGTGTGCCTGC 60.077 57.895 0.00 0.00 35.27 4.85
7809 8168 1.378911 GATGATGGTGTGCCTGCCA 60.379 57.895 0.00 0.00 39.33 4.92
7810 8169 0.966875 GATGATGGTGTGCCTGCCAA 60.967 55.000 0.00 0.00 38.38 4.52
7811 8170 0.968901 ATGATGGTGTGCCTGCCAAG 60.969 55.000 0.00 0.00 38.38 3.61
7812 8171 1.604593 GATGGTGTGCCTGCCAAGT 60.605 57.895 0.00 0.00 38.38 3.16
7813 8172 1.870055 GATGGTGTGCCTGCCAAGTG 61.870 60.000 0.00 0.00 38.38 3.16
7815 8174 2.723746 GTGTGCCTGCCAAGTGTG 59.276 61.111 0.00 0.00 0.00 3.82
7816 8175 1.823470 GTGTGCCTGCCAAGTGTGA 60.823 57.895 0.00 0.00 0.00 3.58
7817 8176 1.823470 TGTGCCTGCCAAGTGTGAC 60.823 57.895 0.00 0.00 0.00 3.67
7819 8178 1.151221 TGCCTGCCAAGTGTGACAT 59.849 52.632 0.00 0.00 0.00 3.06
7820 8179 1.174078 TGCCTGCCAAGTGTGACATG 61.174 55.000 0.00 0.00 0.00 3.21
7821 8180 1.582968 CCTGCCAAGTGTGACATGC 59.417 57.895 0.00 0.00 0.00 4.06
7822 8181 1.582968 CTGCCAAGTGTGACATGCC 59.417 57.895 0.00 0.00 0.00 4.40
7823 8182 2.191354 CTGCCAAGTGTGACATGCCG 62.191 60.000 0.00 0.00 0.00 5.69
7824 8183 2.562912 CCAAGTGTGACATGCCGC 59.437 61.111 0.00 0.00 0.00 6.53
7825 8184 1.968017 CCAAGTGTGACATGCCGCT 60.968 57.895 0.00 0.00 0.00 5.52
7826 8185 0.673333 CCAAGTGTGACATGCCGCTA 60.673 55.000 0.00 0.00 0.00 4.26
7827 8186 1.155889 CAAGTGTGACATGCCGCTAA 58.844 50.000 0.00 0.00 0.00 3.09
7828 8187 1.739466 CAAGTGTGACATGCCGCTAAT 59.261 47.619 0.00 0.00 0.00 1.73
7829 8188 2.113860 AGTGTGACATGCCGCTAATT 57.886 45.000 0.00 0.00 0.00 1.40
7830 8189 2.009774 AGTGTGACATGCCGCTAATTC 58.990 47.619 0.00 0.00 0.00 2.17
7831 8190 1.006086 TGTGACATGCCGCTAATTCG 58.994 50.000 0.00 0.00 0.00 3.34
7839 8198 3.959478 CCGCTAATTCGGTGCTAGA 57.041 52.632 0.00 0.00 44.18 2.43
7840 8199 2.218953 CCGCTAATTCGGTGCTAGAA 57.781 50.000 0.00 0.00 44.18 2.10
7841 8200 2.546778 CCGCTAATTCGGTGCTAGAAA 58.453 47.619 0.00 0.00 44.18 2.52
7842 8201 2.284417 CCGCTAATTCGGTGCTAGAAAC 59.716 50.000 0.00 0.00 44.18 2.78
7843 8202 3.187700 CGCTAATTCGGTGCTAGAAACT 58.812 45.455 0.00 0.00 0.00 2.66
7844 8203 3.617263 CGCTAATTCGGTGCTAGAAACTT 59.383 43.478 0.00 0.00 0.00 2.66
7845 8204 4.092968 CGCTAATTCGGTGCTAGAAACTTT 59.907 41.667 0.00 0.00 0.00 2.66
7846 8205 5.561070 GCTAATTCGGTGCTAGAAACTTTC 58.439 41.667 0.00 0.00 0.00 2.62
7847 8206 5.447413 GCTAATTCGGTGCTAGAAACTTTCC 60.447 44.000 0.00 0.00 0.00 3.13
7848 8207 2.074547 TCGGTGCTAGAAACTTTCCG 57.925 50.000 0.00 0.00 38.16 4.30
7851 8210 2.096417 CGGTGCTAGAAACTTTCCGTTG 60.096 50.000 0.00 0.00 35.61 4.10
7855 8214 5.410439 GGTGCTAGAAACTTTCCGTTGAATA 59.590 40.000 0.00 0.00 35.61 1.75
7859 8218 4.981812 AGAAACTTTCCGTTGAATAGGGT 58.018 39.130 0.00 0.00 35.61 4.34
7862 8221 4.569719 ACTTTCCGTTGAATAGGGTGAT 57.430 40.909 0.00 0.00 33.40 3.06
7864 8223 5.671493 ACTTTCCGTTGAATAGGGTGATAG 58.329 41.667 0.00 0.00 33.40 2.08
7866 8225 4.931661 TCCGTTGAATAGGGTGATAGAC 57.068 45.455 0.00 0.00 33.40 2.59
7867 8226 4.283337 TCCGTTGAATAGGGTGATAGACA 58.717 43.478 0.00 0.00 33.40 3.41
7880 8239 5.114804 GTGATAGACACGAAACGATGAAC 57.885 43.478 0.00 0.00 39.78 3.18
7897 10047 3.659786 TGAACCACCATCGTCTAGTTTG 58.340 45.455 0.00 0.00 0.00 2.93
7905 10055 2.342910 TCGTCTAGTTTGAAGACCGC 57.657 50.000 0.00 0.00 40.24 5.68
7907 10057 1.400629 CGTCTAGTTTGAAGACCGCGA 60.401 52.381 8.23 0.00 40.24 5.87
7922 10072 2.998667 CGAGGATGAAAGACGCGC 59.001 61.111 5.73 0.00 0.00 6.86
7925 10075 2.508439 GGATGAAAGACGCGCCGA 60.508 61.111 5.73 0.00 0.00 5.54
8019 10169 9.736414 ATAGAGTTGTAGTTGTTGTAGACTAGA 57.264 33.333 0.00 0.00 0.00 2.43
8020 10170 8.461249 AGAGTTGTAGTTGTTGTAGACTAGAA 57.539 34.615 0.00 0.00 31.60 2.10
8021 10171 8.569641 AGAGTTGTAGTTGTTGTAGACTAGAAG 58.430 37.037 0.00 0.00 33.84 2.85
8022 10172 7.659186 AGTTGTAGTTGTTGTAGACTAGAAGG 58.341 38.462 0.00 0.00 33.84 3.46
8023 10173 6.022163 TGTAGTTGTTGTAGACTAGAAGGC 57.978 41.667 0.00 0.00 0.00 4.35
8024 10174 4.538746 AGTTGTTGTAGACTAGAAGGCC 57.461 45.455 0.00 0.00 0.00 5.19
8025 10175 3.901844 AGTTGTTGTAGACTAGAAGGCCA 59.098 43.478 5.01 0.00 0.00 5.36
8026 10176 4.347000 AGTTGTTGTAGACTAGAAGGCCAA 59.653 41.667 5.01 0.00 0.00 4.52
8027 10177 5.013183 AGTTGTTGTAGACTAGAAGGCCAAT 59.987 40.000 5.01 0.00 0.00 3.16
8028 10178 6.212791 AGTTGTTGTAGACTAGAAGGCCAATA 59.787 38.462 5.01 0.00 0.00 1.90
8029 10179 6.614694 TGTTGTAGACTAGAAGGCCAATAA 57.385 37.500 5.01 0.00 0.00 1.40
8030 10180 7.195374 TGTTGTAGACTAGAAGGCCAATAAT 57.805 36.000 5.01 0.00 0.00 1.28
8031 10181 8.313944 TGTTGTAGACTAGAAGGCCAATAATA 57.686 34.615 5.01 0.00 0.00 0.98
8032 10182 8.421784 TGTTGTAGACTAGAAGGCCAATAATAG 58.578 37.037 5.01 2.11 0.00 1.73
8033 10183 8.639761 GTTGTAGACTAGAAGGCCAATAATAGA 58.360 37.037 5.01 0.00 0.00 1.98
8034 10184 8.777578 TGTAGACTAGAAGGCCAATAATAGAA 57.222 34.615 5.01 0.00 0.00 2.10
8035 10185 9.209048 TGTAGACTAGAAGGCCAATAATAGAAA 57.791 33.333 5.01 0.00 0.00 2.52
8038 10188 8.379331 AGACTAGAAGGCCAATAATAGAAATCC 58.621 37.037 5.01 0.00 0.00 3.01
8039 10189 8.045720 ACTAGAAGGCCAATAATAGAAATCCA 57.954 34.615 5.01 0.00 0.00 3.41
8040 10190 8.160106 ACTAGAAGGCCAATAATAGAAATCCAG 58.840 37.037 5.01 0.00 0.00 3.86
8041 10191 5.772169 AGAAGGCCAATAATAGAAATCCAGC 59.228 40.000 5.01 0.00 0.00 4.85
8042 10192 5.065613 AGGCCAATAATAGAAATCCAGCA 57.934 39.130 5.01 0.00 0.00 4.41
8043 10193 4.829492 AGGCCAATAATAGAAATCCAGCAC 59.171 41.667 5.01 0.00 0.00 4.40
8044 10194 4.829492 GGCCAATAATAGAAATCCAGCACT 59.171 41.667 0.00 0.00 0.00 4.40
8045 10195 5.048434 GGCCAATAATAGAAATCCAGCACTC 60.048 44.000 0.00 0.00 0.00 3.51
8046 10196 5.048434 GCCAATAATAGAAATCCAGCACTCC 60.048 44.000 0.00 0.00 0.00 3.85
8047 10197 6.064060 CCAATAATAGAAATCCAGCACTCCA 58.936 40.000 0.00 0.00 0.00 3.86
8048 10198 6.016777 CCAATAATAGAAATCCAGCACTCCAC 60.017 42.308 0.00 0.00 0.00 4.02
8049 10199 2.672961 TAGAAATCCAGCACTCCACG 57.327 50.000 0.00 0.00 0.00 4.94
8050 10200 0.036010 AGAAATCCAGCACTCCACGG 60.036 55.000 0.00 0.00 0.00 4.94
8051 10201 1.002134 AAATCCAGCACTCCACGGG 60.002 57.895 0.00 0.00 0.00 5.28
8052 10202 2.484287 AAATCCAGCACTCCACGGGG 62.484 60.000 0.00 0.00 0.00 5.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 5.452356 GGGCCAAAGATCAAATGAATAGGTG 60.452 44.000 4.39 0.00 0.00 4.00
36 37 4.651045 GGGCCAAAGATCAAATGAATAGGT 59.349 41.667 4.39 0.00 0.00 3.08
60 61 7.412853 GTGAAGCTTGACAAGAATATATGGTG 58.587 38.462 19.51 0.00 0.00 4.17
79 80 5.743158 AGCCTCACATACAGTGGTGAAGC 62.743 52.174 17.05 17.05 46.66 3.86
83 84 6.405698 TCGTAAGCCTCACATACAGTGGTG 62.406 50.000 0.00 1.68 43.02 4.17
84 85 4.377774 TCGTAAGCCTCACATACAGTGGT 61.378 47.826 0.00 0.00 43.02 4.16
86 87 3.503827 TCGTAAGCCTCACATACAGTG 57.496 47.619 0.00 0.00 43.79 3.66
88 89 3.068165 TGGATCGTAAGCCTCACATACAG 59.932 47.826 0.00 0.00 37.18 2.74
91 92 3.704566 ACTTGGATCGTAAGCCTCACATA 59.295 43.478 7.92 0.00 37.18 2.29
92 93 2.501723 ACTTGGATCGTAAGCCTCACAT 59.498 45.455 7.92 0.00 37.18 3.21
93 94 1.899814 ACTTGGATCGTAAGCCTCACA 59.100 47.619 7.92 0.00 37.18 3.58
94 95 2.094182 TCACTTGGATCGTAAGCCTCAC 60.094 50.000 7.92 0.00 37.18 3.51
95 96 2.176045 TCACTTGGATCGTAAGCCTCA 58.824 47.619 7.92 0.00 37.18 3.86
96 97 2.961526 TCACTTGGATCGTAAGCCTC 57.038 50.000 7.92 0.00 37.18 4.70
97 98 5.305644 AGAATATCACTTGGATCGTAAGCCT 59.694 40.000 7.92 0.00 37.44 4.58
98 99 5.542779 AGAATATCACTTGGATCGTAAGCC 58.457 41.667 7.92 0.00 37.44 4.35
99 100 7.652105 TGTTAGAATATCACTTGGATCGTAAGC 59.348 37.037 7.92 0.00 37.44 3.09
100 101 8.969267 GTGTTAGAATATCACTTGGATCGTAAG 58.031 37.037 6.76 6.76 38.06 2.34
101 102 8.692710 AGTGTTAGAATATCACTTGGATCGTAA 58.307 33.333 0.00 0.00 46.41 3.18
112 113 6.716934 TGAGGAGGAGTGTTAGAATATCAC 57.283 41.667 0.00 0.00 40.65 3.06
161 162 7.929785 ACGGTATCTTGAAGTCTAAGAAAACAA 59.070 33.333 0.00 0.00 37.67 2.83
169 170 6.209192 TGTTGGTACGGTATCTTGAAGTCTAA 59.791 38.462 0.00 0.00 0.00 2.10
170 171 5.711506 TGTTGGTACGGTATCTTGAAGTCTA 59.288 40.000 0.00 0.00 0.00 2.59
171 172 4.525487 TGTTGGTACGGTATCTTGAAGTCT 59.475 41.667 0.00 0.00 0.00 3.24
172 173 4.813027 TGTTGGTACGGTATCTTGAAGTC 58.187 43.478 0.00 0.00 0.00 3.01
173 174 4.525487 TCTGTTGGTACGGTATCTTGAAGT 59.475 41.667 0.00 0.00 32.23 3.01
195 196 3.485633 GCGAACGAATTTACCAAACCTC 58.514 45.455 0.00 0.00 0.00 3.85
268 269 5.807011 GTGGATTATCATTTTGTGTTGAGCC 59.193 40.000 0.00 0.00 0.00 4.70
279 280 4.216257 GCATACTGCGGTGGATTATCATTT 59.784 41.667 8.92 0.00 31.71 2.32
294 295 2.426522 TGACCAAACTGAGCATACTGC 58.573 47.619 0.00 0.00 45.46 4.40
295 296 4.256110 TCATGACCAAACTGAGCATACTG 58.744 43.478 0.00 0.00 0.00 2.74
333 334 1.686355 TTAGGGGCGGCATATTTGTG 58.314 50.000 12.47 0.00 0.00 3.33
338 339 4.263727 TGTGATAATTTAGGGGCGGCATAT 60.264 41.667 12.47 0.00 0.00 1.78
343 344 2.227194 GGTGTGATAATTTAGGGGCGG 58.773 52.381 0.00 0.00 0.00 6.13
344 345 2.925724 TGGTGTGATAATTTAGGGGCG 58.074 47.619 0.00 0.00 0.00 6.13
354 355 3.006430 ACGACAGTGTCATGGTGTGATAA 59.994 43.478 22.66 0.00 39.48 1.75
374 375 2.159085 GGGAGTACCTCATCCTCAAACG 60.159 54.545 0.00 0.00 35.80 3.60
399 400 4.821805 TCTCACTAAGTTTTTGCTCAAGGG 59.178 41.667 0.00 0.00 0.00 3.95
443 444 3.463048 AGGGAAACGAAGGTACCTCTA 57.537 47.619 16.64 0.00 0.00 2.43
450 451 3.220110 GAAGGAAAAGGGAAACGAAGGT 58.780 45.455 0.00 0.00 0.00 3.50
485 486 3.059603 CCGATACAACGGTGAAGGG 57.940 57.895 7.88 0.00 46.70 3.95
506 507 4.171754 GACCAACGTAGAGGATGTTACAC 58.828 47.826 8.42 0.00 35.41 2.90
528 529 1.909302 TGAGGAAGGCTAGAAGGTTGG 59.091 52.381 0.00 0.00 0.00 3.77
530 531 2.192263 CCTGAGGAAGGCTAGAAGGTT 58.808 52.381 0.00 0.00 39.93 3.50
544 545 1.069022 CGAAACAATGTGTGCCTGAGG 60.069 52.381 0.00 0.00 0.00 3.86
548 549 0.743688 TTGCGAAACAATGTGTGCCT 59.256 45.000 0.00 0.00 31.73 4.75
571 572 3.487120 AGTCTTGTTTACGAGCCCTTT 57.513 42.857 0.00 0.00 0.00 3.11
625 626 5.194942 AGGAGAAGAGTATGTAGGAGGAAGT 59.805 44.000 0.00 0.00 0.00 3.01
675 679 2.726821 TGGTTCCCTCATCAGATTTGC 58.273 47.619 0.00 0.00 0.00 3.68
698 702 9.877178 TTTTGGCATTTTTCTAAAGTGAGTTTA 57.123 25.926 0.00 0.00 0.00 2.01
845 852 5.356426 CCATTTGTATCACGTCAGGTATCA 58.644 41.667 0.00 0.00 0.00 2.15
862 869 1.802636 CTACTGTGCGGCCCATTTG 59.197 57.895 0.00 0.00 0.00 2.32
883 890 1.676967 GGTGAAGAAGCTGGGCAGG 60.677 63.158 0.00 0.00 0.00 4.85
893 900 0.550914 AACAGTGCCTGGGTGAAGAA 59.449 50.000 7.06 0.00 35.51 2.52
928 943 2.032681 AACTGAAGGGCTGACCGC 59.967 61.111 0.00 0.00 46.96 5.68
953 970 1.909781 AAGTAAGCCCGACGGACCA 60.910 57.895 17.49 0.00 0.00 4.02
1261 1280 3.072468 CGGCGGGAAGGTGGAGTA 61.072 66.667 0.00 0.00 0.00 2.59
1282 1301 3.708236 ATGGAGTATACCAGGTCCAGT 57.292 47.619 14.75 3.97 42.35 4.00
1431 1453 1.720852 CAACAGCGGCAATTTTACTGC 59.279 47.619 1.45 0.00 39.16 4.40
1455 1477 4.034975 AGACTTACTCCGTATCGCAAGTAC 59.965 45.833 0.00 0.00 39.48 2.73
1465 1487 2.885135 TCACCCAGACTTACTCCGTA 57.115 50.000 0.00 0.00 0.00 4.02
1468 1490 2.159028 GCAGATCACCCAGACTTACTCC 60.159 54.545 0.00 0.00 0.00 3.85
1470 1492 2.499289 CAGCAGATCACCCAGACTTACT 59.501 50.000 0.00 0.00 0.00 2.24
1471 1493 2.898705 CAGCAGATCACCCAGACTTAC 58.101 52.381 0.00 0.00 0.00 2.34
1497 1519 1.808945 CACAGAACACCATCCTCTTGC 59.191 52.381 0.00 0.00 0.00 4.01
1501 1523 7.396540 AAAAATATCACAGAACACCATCCTC 57.603 36.000 0.00 0.00 0.00 3.71
1533 1555 1.611006 TCTGCTGGATCGCTGATACTC 59.389 52.381 3.09 0.00 33.71 2.59
1542 1564 0.249405 GCTCTTCCTCTGCTGGATCG 60.249 60.000 0.00 0.00 35.83 3.69
1620 1642 2.297880 GTCCCCGGCAAATAACAAACTT 59.702 45.455 0.00 0.00 0.00 2.66
1705 1727 2.708216 TTTTGAGTGCACTCTGTGGA 57.292 45.000 38.81 21.59 43.25 4.02
1708 1730 3.696051 ACAACATTTTGAGTGCACTCTGT 59.304 39.130 38.81 31.90 43.25 3.41
1714 1736 1.411977 CCCCACAACATTTTGAGTGCA 59.588 47.619 0.00 0.00 36.48 4.57
1715 1737 1.270252 CCCCCACAACATTTTGAGTGC 60.270 52.381 0.00 0.00 36.48 4.40
1720 1742 3.465871 CAAACTCCCCCACAACATTTTG 58.534 45.455 0.00 0.00 38.83 2.44
1733 1755 0.391661 TCTCATCGCTGCAAACTCCC 60.392 55.000 0.00 0.00 0.00 4.30
1740 1764 2.938451 CCAAGTATTTCTCATCGCTGCA 59.062 45.455 0.00 0.00 0.00 4.41
1750 1774 7.074653 TGGAGTTACTGTTCCAAGTATTTCT 57.925 36.000 0.00 0.00 40.41 2.52
1766 1790 4.994852 TGTCAGTTGCTACAATGGAGTTAC 59.005 41.667 0.13 0.00 0.00 2.50
1824 1848 2.335681 TGACACCTCCTGGTCCAATA 57.664 50.000 0.00 0.00 46.60 1.90
1831 1855 0.251297 TGGCATTTGACACCTCCTGG 60.251 55.000 0.00 0.00 39.83 4.45
1834 1858 3.316308 GTCATATGGCATTTGACACCTCC 59.684 47.826 32.52 14.28 39.85 4.30
1840 1864 5.581126 TTGGAAGTCATATGGCATTTGAC 57.419 39.130 31.30 31.30 40.22 3.18
1855 1879 3.864789 TTTCTCCAGAAGCTTGGAAGT 57.135 42.857 2.10 0.00 46.20 3.01
1916 1941 9.396022 CTACAATGGTGTTATTCTTCCAACTAT 57.604 33.333 0.00 0.00 39.30 2.12
1919 1944 6.072175 TGCTACAATGGTGTTATTCTTCCAAC 60.072 38.462 0.00 0.00 39.30 3.77
1935 1960 3.499537 TGCTCTTGTCAGTTGCTACAATG 59.500 43.478 0.13 0.00 35.21 2.82
1940 1965 1.416030 TGGTGCTCTTGTCAGTTGCTA 59.584 47.619 0.00 0.00 0.00 3.49
1948 1973 2.191128 ACTCCAATGGTGCTCTTGTC 57.809 50.000 0.00 0.00 0.00 3.18
1950 1975 5.647658 TGTATAAACTCCAATGGTGCTCTTG 59.352 40.000 0.00 0.00 0.00 3.02
1967 1996 5.125417 GCAGAAGGATGCCACTTTGTATAAA 59.875 40.000 0.00 0.00 40.43 1.40
1985 2014 7.819900 ACCACAAGTAACTAGAAATAGCAGAAG 59.180 37.037 0.00 0.00 0.00 2.85
2177 2209 7.260558 TGACCTCAGTTCAACTACTATATCG 57.739 40.000 0.00 0.00 0.00 2.92
2219 2251 2.046023 CCAGCAGGAATGCCACGA 60.046 61.111 0.00 0.00 36.89 4.35
2396 2428 6.486657 ACCACGTGATATCCCTGAATAAAATG 59.513 38.462 19.30 0.00 0.00 2.32
2471 2503 6.708949 AGAACAATTGATTGCAAAGCTGAAAT 59.291 30.769 13.59 0.00 41.38 2.17
2472 2504 6.050432 AGAACAATTGATTGCAAAGCTGAAA 58.950 32.000 13.59 0.00 41.38 2.69
2486 2518 8.806429 TCCTAGCATATTCAAAGAACAATTGA 57.194 30.769 13.59 0.00 35.11 2.57
2630 2662 5.762179 AGATCTTCCACAACTCCAATACA 57.238 39.130 0.00 0.00 0.00 2.29
2926 2960 5.581085 ACTGCGAAAACAGATGGAGTTATAC 59.419 40.000 0.00 0.00 40.25 1.47
2940 2974 3.311596 AGAAACTACACCACTGCGAAAAC 59.688 43.478 0.00 0.00 0.00 2.43
2991 3026 1.458639 GCTTGCCACAACCTTGAGCT 61.459 55.000 0.00 0.00 34.00 4.09
3255 3290 0.861837 GCACACACACGAAAGAGAGG 59.138 55.000 0.00 0.00 0.00 3.69
3277 3314 4.428922 CATGTGACACGTGCGCCG 62.429 66.667 17.22 15.25 44.03 6.46
3406 3451 2.412591 ACATACCTCTTCCTGATGGGG 58.587 52.381 0.00 0.00 35.33 4.96
3429 3474 7.861629 TGGAATGGAATACACTGAGATACTTT 58.138 34.615 0.00 0.00 0.00 2.66
3487 3532 8.902540 AAGGTCGATGCATTTATAACATCTAA 57.097 30.769 0.00 0.50 38.42 2.10
3549 3606 7.792364 TTTCACCATCTACTTCCTTCTTAGA 57.208 36.000 0.00 0.00 0.00 2.10
3572 3629 5.712152 AACTTCCTGATGAATCGCTTTTT 57.288 34.783 0.00 0.00 31.06 1.94
3578 3635 5.385617 GTGTTGAAACTTCCTGATGAATCG 58.614 41.667 0.00 0.00 31.06 3.34
3629 3686 2.497138 TCACTGCTGGAATGTCTGTTG 58.503 47.619 0.00 0.00 0.00 3.33
3630 3687 2.936919 TCACTGCTGGAATGTCTGTT 57.063 45.000 0.00 0.00 0.00 3.16
3634 3691 3.257469 TCTCATCACTGCTGGAATGTC 57.743 47.619 0.00 0.00 0.00 3.06
3655 3712 1.759445 CACCGTCATCCTTCTCATCCT 59.241 52.381 0.00 0.00 0.00 3.24
3656 3713 1.757118 TCACCGTCATCCTTCTCATCC 59.243 52.381 0.00 0.00 0.00 3.51
3657 3714 3.452474 CTTCACCGTCATCCTTCTCATC 58.548 50.000 0.00 0.00 0.00 2.92
3658 3715 2.419297 GCTTCACCGTCATCCTTCTCAT 60.419 50.000 0.00 0.00 0.00 2.90
3659 3716 1.066858 GCTTCACCGTCATCCTTCTCA 60.067 52.381 0.00 0.00 0.00 3.27
3660 3717 1.066858 TGCTTCACCGTCATCCTTCTC 60.067 52.381 0.00 0.00 0.00 2.87
3661 3718 0.976641 TGCTTCACCGTCATCCTTCT 59.023 50.000 0.00 0.00 0.00 2.85
3662 3719 1.079503 GTGCTTCACCGTCATCCTTC 58.920 55.000 0.00 0.00 0.00 3.46
3663 3720 0.396435 TGTGCTTCACCGTCATCCTT 59.604 50.000 0.00 0.00 32.73 3.36
3674 3731 2.722094 ACAGTTCAAACCTGTGCTTCA 58.278 42.857 0.00 0.00 0.00 3.02
3744 3801 7.872993 AGAGCATACATAAACATATAACAGCGT 59.127 33.333 0.00 0.00 0.00 5.07
3746 3803 7.959651 GCAGAGCATACATAAACATATAACAGC 59.040 37.037 0.00 0.00 0.00 4.40
3822 3879 5.296780 ACATTGAACACTGACCTGTAGTTTG 59.703 40.000 0.00 0.00 0.00 2.93
3925 3982 2.465839 CACACGCAACCAAAACATAACG 59.534 45.455 0.00 0.00 0.00 3.18
3931 3988 0.109039 ACCACACACGCAACCAAAAC 60.109 50.000 0.00 0.00 0.00 2.43
3942 3999 4.566360 CAGAAAAATGTTGGAACCACACAC 59.434 41.667 9.61 0.70 0.00 3.82
3958 4015 9.959721 ATCAACTATCTAGTTAAGGCAGAAAAA 57.040 29.630 2.43 0.00 44.19 1.94
4048 4106 7.712205 CCTTCCGCATGAATGTATGATCATATA 59.288 37.037 18.18 15.90 34.61 0.86
4050 4108 5.876460 CCTTCCGCATGAATGTATGATCATA 59.124 40.000 11.49 11.49 34.61 2.15
4092 4150 3.497103 TGTGGCATCATAATCTGGAGG 57.503 47.619 0.00 0.00 0.00 4.30
4098 4156 7.934457 ACTCATTAGTTTGTGGCATCATAATC 58.066 34.615 0.00 0.00 29.00 1.75
4139 4302 6.372659 AGCATGTTCTCACGTCAATATTTTCT 59.627 34.615 0.00 0.00 0.00 2.52
4152 4315 4.453478 TGTTCAATCAGAGCATGTTCTCAC 59.547 41.667 9.39 1.27 35.59 3.51
4155 4318 4.392047 TGTGTTCAATCAGAGCATGTTCT 58.608 39.130 6.20 6.20 39.74 3.01
4158 4321 4.001652 CTCTGTGTTCAATCAGAGCATGT 58.998 43.478 8.82 0.00 46.76 3.21
4190 4353 3.776158 GGCATTTGTGACAGCCCA 58.224 55.556 3.15 0.00 41.25 5.36
4193 4356 0.953727 TGTCAGGCATTTGTGACAGC 59.046 50.000 2.72 0.00 46.35 4.40
4196 4359 3.184986 GCATTTTGTCAGGCATTTGTGAC 59.815 43.478 0.00 0.00 42.93 3.67
4197 4360 3.069872 AGCATTTTGTCAGGCATTTGTGA 59.930 39.130 0.00 0.00 0.00 3.58
4198 4361 3.395639 AGCATTTTGTCAGGCATTTGTG 58.604 40.909 0.00 0.00 0.00 3.33
4199 4362 3.756933 AGCATTTTGTCAGGCATTTGT 57.243 38.095 0.00 0.00 0.00 2.83
4200 4363 4.753107 AGAAAGCATTTTGTCAGGCATTTG 59.247 37.500 0.00 0.00 39.27 2.32
4202 4365 4.612264 AGAAAGCATTTTGTCAGGCATT 57.388 36.364 0.00 0.00 39.27 3.56
4203 4366 4.039488 TCAAGAAAGCATTTTGTCAGGCAT 59.961 37.500 0.00 0.00 39.27 4.40
4243 4406 7.524065 ACCACAACTATATGAAAGTAAAACGC 58.476 34.615 0.00 0.00 0.00 4.84
4335 4504 1.061276 GCCTGCTTCGTCGATTTTCTC 59.939 52.381 0.00 0.00 0.00 2.87
4477 4646 2.163509 TCTCCTGAACTGAAGAGTCCG 58.836 52.381 0.00 0.00 0.00 4.79
4518 4687 6.426587 ACATCCAAAAGGCAGTACTATCAAT 58.573 36.000 0.00 0.00 0.00 2.57
4532 4701 4.455606 GGAGGTCATCCTACATCCAAAAG 58.544 47.826 3.00 0.00 46.99 2.27
4533 4702 4.503714 GGAGGTCATCCTACATCCAAAA 57.496 45.455 3.00 0.00 46.99 2.44
4657 4826 4.158394 GTGCAGTTATGTGGTGATCCAAAT 59.842 41.667 0.00 0.00 46.15 2.32
4675 4844 5.121454 GTCAAGACTAAAATCAGAGGTGCAG 59.879 44.000 0.00 0.00 0.00 4.41
4721 4890 3.209410 GAGACCTGCAGATAACCAATGG 58.791 50.000 17.39 0.00 0.00 3.16
4734 4903 1.172812 AAAACGGCCTTGAGACCTGC 61.173 55.000 0.00 0.00 0.00 4.85
4771 4940 6.008960 AGATTTCAAGGAATCAGAAGCAAGT 58.991 36.000 4.04 0.00 38.27 3.16
4873 5042 0.962356 AACCATTCTTCTGCCGCTGG 60.962 55.000 0.00 0.00 0.00 4.85
4879 5048 1.135460 GCTGCTGAACCATTCTTCTGC 60.135 52.381 0.00 4.39 42.47 4.26
4990 5161 5.116084 AGATGGCTAGAAAAATGCTGGTA 57.884 39.130 0.00 0.00 0.00 3.25
5018 5189 0.669318 CGAGTTTAACAGGCTGGCGA 60.669 55.000 20.34 0.00 0.00 5.54
5021 5192 3.432252 CAGTAACGAGTTTAACAGGCTGG 59.568 47.826 20.34 0.16 0.00 4.85
5078 5351 8.478066 TGACACTGTTAGCTTCTATAATGTCAT 58.522 33.333 0.00 0.00 38.17 3.06
5101 5374 4.323417 TGAATACCTTGTGGACACATGAC 58.677 43.478 16.93 0.00 41.52 3.06
5131 5404 5.685520 AATAAAATTAACCGGGTGCCATT 57.314 34.783 0.00 0.00 0.00 3.16
5132 5405 6.130569 TCTAATAAAATTAACCGGGTGCCAT 58.869 36.000 0.00 0.00 0.00 4.40
5133 5406 5.507637 TCTAATAAAATTAACCGGGTGCCA 58.492 37.500 0.00 0.00 0.00 4.92
5134 5407 6.040054 ACATCTAATAAAATTAACCGGGTGCC 59.960 38.462 0.00 0.00 0.00 5.01
5135 5408 7.034685 ACATCTAATAAAATTAACCGGGTGC 57.965 36.000 0.00 0.00 0.00 5.01
5137 5410 8.810990 TCAACATCTAATAAAATTAACCGGGT 57.189 30.769 6.32 0.00 0.00 5.28
5139 5412 9.511144 GGTTCAACATCTAATAAAATTAACCGG 57.489 33.333 0.00 0.00 0.00 5.28
5140 5413 9.511144 GGGTTCAACATCTAATAAAATTAACCG 57.489 33.333 0.00 0.00 33.84 4.44
5151 5424 6.256053 AGGACAAATGGGTTCAACATCTAAT 58.744 36.000 0.00 0.00 0.00 1.73
5183 5456 5.937540 TGTGTCCGAACAAGAAACATATCAT 59.062 36.000 0.00 0.00 37.08 2.45
5190 5463 1.004292 CCGTGTGTCCGAACAAGAAAC 60.004 52.381 0.00 0.00 37.08 2.78
5208 5481 0.958091 TTCAAGACAACAATGGCCCG 59.042 50.000 0.00 0.00 33.81 6.13
5209 5482 5.343307 AATATTCAAGACAACAATGGCCC 57.657 39.130 0.00 0.00 33.81 5.80
5286 5563 8.865978 CCCTGAAAAAGTAACAACAGTTTTTAC 58.134 33.333 12.65 12.65 39.81 2.01
5289 5566 7.234661 TCCCTGAAAAAGTAACAACAGTTTT 57.765 32.000 0.00 0.00 33.48 2.43
5312 5590 7.607991 TCATTACCATTCACTCTCCTTTTCTTC 59.392 37.037 0.00 0.00 0.00 2.87
5334 5612 3.754850 CGTGGCACATGGATCATATCATT 59.245 43.478 19.09 0.00 44.52 2.57
5348 5626 2.027100 TGGTATATGTTTCCGTGGCACA 60.027 45.455 19.09 0.00 0.00 4.57
5352 5630 3.494398 CCTCCTGGTATATGTTTCCGTGG 60.494 52.174 0.00 0.00 0.00 4.94
5355 5633 3.728845 CACCTCCTGGTATATGTTTCCG 58.271 50.000 0.00 0.00 46.60 4.30
5361 5639 4.667573 TCTAGAGCACCTCCTGGTATATG 58.332 47.826 0.00 0.00 46.60 1.78
5365 5643 1.923850 ACTCTAGAGCACCTCCTGGTA 59.076 52.381 19.97 0.00 46.60 3.25
5367 5645 1.064017 AGACTCTAGAGCACCTCCTGG 60.064 57.143 19.97 0.00 39.83 4.45
5371 5649 6.518208 TTTTAAGAGACTCTAGAGCACCTC 57.482 41.667 19.97 20.53 0.00 3.85
5374 5652 7.976734 TGCTATTTTTAAGAGACTCTAGAGCAC 59.023 37.037 19.97 13.68 0.00 4.40
5381 5659 8.951243 GTTCCATTGCTATTTTTAAGAGACTCT 58.049 33.333 0.00 0.00 0.00 3.24
5390 5668 9.466497 AGAGATTCAGTTCCATTGCTATTTTTA 57.534 29.630 0.00 0.00 0.00 1.52
5420 5698 8.288812 TCATTATTGTCATCCTCCCCTAATTTT 58.711 33.333 0.00 0.00 0.00 1.82
5432 5710 9.950680 ACATTTATTTCGTCATTATTGTCATCC 57.049 29.630 0.00 0.00 0.00 3.51
5551 5829 7.661536 ACTGACTTATCTCTGCCTAATAACA 57.338 36.000 0.00 0.00 0.00 2.41
5555 5833 6.798427 TCAACTGACTTATCTCTGCCTAAT 57.202 37.500 0.00 0.00 0.00 1.73
5570 5848 7.976135 ATAAGATAATGAGCCATCAACTGAC 57.024 36.000 0.00 0.00 39.39 3.51
5656 5943 5.649831 AGCTATCAATCAAACCTGAAGGAAC 59.350 40.000 2.62 0.00 38.94 3.62
5717 6030 1.206878 AGATGACATGCAGGTGGCTA 58.793 50.000 9.62 0.00 45.15 3.93
5723 6036 1.135094 ACCCCTAGATGACATGCAGG 58.865 55.000 0.00 0.00 0.00 4.85
5728 6041 6.831664 ATCAGTTTAACCCCTAGATGACAT 57.168 37.500 0.00 0.00 0.00 3.06
5745 6068 4.433615 CTGTAAGTGGCGATGTATCAGTT 58.566 43.478 0.00 0.00 0.00 3.16
5746 6069 3.181475 CCTGTAAGTGGCGATGTATCAGT 60.181 47.826 0.00 0.00 0.00 3.41
5747 6070 3.181475 ACCTGTAAGTGGCGATGTATCAG 60.181 47.826 0.00 0.00 0.00 2.90
5748 6071 2.764010 ACCTGTAAGTGGCGATGTATCA 59.236 45.455 0.00 0.00 0.00 2.15
5749 6072 3.454371 ACCTGTAAGTGGCGATGTATC 57.546 47.619 0.00 0.00 0.00 2.24
5750 6073 4.212716 TCTACCTGTAAGTGGCGATGTAT 58.787 43.478 0.00 0.00 0.00 2.29
5751 6074 3.623703 TCTACCTGTAAGTGGCGATGTA 58.376 45.455 0.00 0.00 0.00 2.29
5752 6075 2.453521 TCTACCTGTAAGTGGCGATGT 58.546 47.619 0.00 0.00 0.00 3.06
5753 6076 3.520290 TTCTACCTGTAAGTGGCGATG 57.480 47.619 0.00 0.00 0.00 3.84
5754 6077 3.451178 ACATTCTACCTGTAAGTGGCGAT 59.549 43.478 0.00 0.00 0.00 4.58
5755 6078 2.829720 ACATTCTACCTGTAAGTGGCGA 59.170 45.455 0.00 0.00 0.00 5.54
5756 6079 3.247006 ACATTCTACCTGTAAGTGGCG 57.753 47.619 0.00 0.00 0.00 5.69
5757 6080 4.833390 AGAACATTCTACCTGTAAGTGGC 58.167 43.478 0.00 0.00 35.34 5.01
5758 6081 7.122948 ACTCTAGAACATTCTACCTGTAAGTGG 59.877 40.741 0.00 0.00 38.70 4.00
5759 6082 7.971168 CACTCTAGAACATTCTACCTGTAAGTG 59.029 40.741 0.00 0.00 38.70 3.16
5780 6103 2.101582 AGAACAGAACACGCTTCACTCT 59.898 45.455 0.00 0.00 0.00 3.24
5785 6108 1.193426 GCAGAGAACAGAACACGCTTC 59.807 52.381 0.00 0.00 0.00 3.86
5790 6113 3.924144 AGATCAGCAGAGAACAGAACAC 58.076 45.455 0.00 0.00 0.00 3.32
5796 6119 5.414765 TCGTTAACTAGATCAGCAGAGAACA 59.585 40.000 3.71 0.00 0.00 3.18
5803 6126 6.694877 ACTACATCGTTAACTAGATCAGCA 57.305 37.500 3.71 0.00 0.00 4.41
5804 6127 6.418226 CCAACTACATCGTTAACTAGATCAGC 59.582 42.308 3.71 0.00 0.00 4.26
5820 6143 5.833131 ACAATTTGAACAGGACCAACTACAT 59.167 36.000 2.79 0.00 0.00 2.29
5831 6154 6.780457 ATCTATCCCAACAATTTGAACAGG 57.220 37.500 2.79 0.00 34.24 4.00
5906 6229 8.200792 GCCCACATCATTTGTACCAAAATATTA 58.799 33.333 0.00 0.00 36.57 0.98
5907 6230 7.047271 GCCCACATCATTTGTACCAAAATATT 58.953 34.615 0.00 0.00 36.57 1.28
5908 6231 6.383726 AGCCCACATCATTTGTACCAAAATAT 59.616 34.615 0.00 0.00 36.57 1.28
5909 6232 5.719085 AGCCCACATCATTTGTACCAAAATA 59.281 36.000 0.00 0.00 36.57 1.40
5910 6233 4.531732 AGCCCACATCATTTGTACCAAAAT 59.468 37.500 0.00 0.00 36.57 1.82
5911 6234 3.900601 AGCCCACATCATTTGTACCAAAA 59.099 39.130 0.00 0.00 36.57 2.44
5912 6235 3.257873 CAGCCCACATCATTTGTACCAAA 59.742 43.478 0.00 0.00 36.57 3.28
5913 6236 2.824936 CAGCCCACATCATTTGTACCAA 59.175 45.455 0.00 0.00 36.57 3.67
5914 6237 2.224992 ACAGCCCACATCATTTGTACCA 60.225 45.455 0.00 0.00 36.57 3.25
5915 6238 2.446435 ACAGCCCACATCATTTGTACC 58.554 47.619 0.00 0.00 36.57 3.34
5916 6239 4.036734 CCATACAGCCCACATCATTTGTAC 59.963 45.833 0.00 0.00 36.57 2.90
5925 6248 2.163810 AAATGCCATACAGCCCACAT 57.836 45.000 0.00 0.00 0.00 3.21
5939 6262 9.276397 GCCATCATAAACAAATAAACAAAATGC 57.724 29.630 0.00 0.00 0.00 3.56
5950 6273 4.352009 TGGAGGTGCCATCATAAACAAAT 58.648 39.130 0.00 0.00 43.33 2.32
5986 6313 6.265196 TGCTTGGAAAATGAAGATACACAAGT 59.735 34.615 0.00 0.00 36.21 3.16
5990 6317 9.076596 GTTATTGCTTGGAAAATGAAGATACAC 57.923 33.333 0.00 0.00 0.00 2.90
6018 6345 5.696270 CGTCAGCTATTTATATGACCAAGCA 59.304 40.000 0.00 0.00 39.06 3.91
6024 6351 6.771188 ACTTGCGTCAGCTATTTATATGAC 57.229 37.500 0.00 0.00 45.42 3.06
6029 6356 6.700520 GGTAAGTACTTGCGTCAGCTATTTAT 59.299 38.462 18.56 0.00 45.42 1.40
6037 6364 3.370978 CCATTGGTAAGTACTTGCGTCAG 59.629 47.826 18.56 7.89 0.00 3.51
6040 6367 2.081462 GCCATTGGTAAGTACTTGCGT 58.919 47.619 18.56 3.95 0.00 5.24
6041 6368 2.095853 CAGCCATTGGTAAGTACTTGCG 59.904 50.000 18.56 4.92 0.00 4.85
6042 6369 2.423538 CCAGCCATTGGTAAGTACTTGC 59.576 50.000 18.56 16.55 42.41 4.01
6064 6391 1.001520 AGTTGCGTGTGCTATGGTACA 59.998 47.619 0.00 0.00 43.48 2.90
6065 6392 1.722011 AGTTGCGTGTGCTATGGTAC 58.278 50.000 0.00 0.00 43.34 3.34
6066 6393 2.494471 AGTAGTTGCGTGTGCTATGGTA 59.506 45.455 0.00 0.00 43.34 3.25
6067 6394 1.275291 AGTAGTTGCGTGTGCTATGGT 59.725 47.619 0.00 0.00 43.34 3.55
6068 6395 2.010145 AGTAGTTGCGTGTGCTATGG 57.990 50.000 0.00 0.00 43.34 2.74
6069 6396 3.181520 GGAAAGTAGTTGCGTGTGCTATG 60.182 47.826 0.00 0.00 43.34 2.23
6070 6397 3.000727 GGAAAGTAGTTGCGTGTGCTAT 58.999 45.455 0.00 0.00 43.34 2.97
6071 6398 2.224090 TGGAAAGTAGTTGCGTGTGCTA 60.224 45.455 0.00 0.00 43.34 3.49
6072 6399 1.226746 GGAAAGTAGTTGCGTGTGCT 58.773 50.000 0.00 0.00 43.34 4.40
6073 6400 0.941542 TGGAAAGTAGTTGCGTGTGC 59.058 50.000 0.00 0.00 43.20 4.57
6074 6401 3.554524 CATTGGAAAGTAGTTGCGTGTG 58.445 45.455 0.00 0.00 0.00 3.82
6075 6402 2.552315 CCATTGGAAAGTAGTTGCGTGT 59.448 45.455 0.00 0.00 0.00 4.49
6076 6403 2.668279 GCCATTGGAAAGTAGTTGCGTG 60.668 50.000 6.95 0.00 0.00 5.34
6104 6431 2.908015 GCGGTTCCCTGCTATGGA 59.092 61.111 0.00 0.00 0.00 3.41
6114 6441 3.514645 TGAAATAAGAGTACGCGGTTCC 58.485 45.455 12.47 0.00 0.00 3.62
6118 6445 6.764877 ATTGTATGAAATAAGAGTACGCGG 57.235 37.500 12.47 0.00 0.00 6.46
6166 6493 5.389859 TGATTTTACAGGACATGCCAAAG 57.610 39.130 8.58 1.77 40.02 2.77
6169 6496 6.832900 TGAATATGATTTTACAGGACATGCCA 59.167 34.615 8.58 0.00 40.02 4.92
6183 6510 9.419297 GCAAATGCATATGACTGAATATGATTT 57.581 29.630 6.97 13.47 41.25 2.17
6206 6533 9.665719 TCATATTACAGTAACAGATCTTTGCAA 57.334 29.630 0.00 0.00 0.00 4.08
6216 6543 9.208022 CATGGTGGTATCATATTACAGTAACAG 57.792 37.037 0.00 0.00 0.00 3.16
6217 6544 8.154203 CCATGGTGGTATCATATTACAGTAACA 58.846 37.037 2.57 0.00 31.35 2.41
6218 6545 8.547967 CCATGGTGGTATCATATTACAGTAAC 57.452 38.462 2.57 0.00 31.35 2.50
6235 6562 5.710099 AGACAATAACAAAGTACCATGGTGG 59.290 40.000 28.17 13.27 45.02 4.61
6236 6563 6.817765 AGACAATAACAAAGTACCATGGTG 57.182 37.500 28.17 12.71 0.00 4.17
6237 6564 7.833285 AAAGACAATAACAAAGTACCATGGT 57.167 32.000 23.55 23.55 0.00 3.55
6246 6573 9.515020 TTGCAGAGTTAAAAGACAATAACAAAG 57.485 29.630 0.00 0.00 35.06 2.77
6250 6577 9.899226 ATTCTTGCAGAGTTAAAAGACAATAAC 57.101 29.630 0.00 0.00 33.25 1.89
6267 6600 6.039829 GGGGGAATACTCTAAAATTCTTGCAG 59.960 42.308 0.00 0.00 33.50 4.41
6289 6622 1.686110 AGCTGGTAACTCGAGGGGG 60.686 63.158 18.41 1.85 37.61 5.40
6314 6647 5.238650 GCATACTGACCATAATAAAACCGCT 59.761 40.000 0.00 0.00 0.00 5.52
6329 6664 2.613595 TGCAAATGATCCGCATACTGAC 59.386 45.455 0.00 0.00 35.78 3.51
6334 6669 3.144657 AGGATGCAAATGATCCGCATA 57.855 42.857 8.46 0.00 46.01 3.14
6380 6715 2.715737 TTGGTTTAATTGCCGCAGAC 57.284 45.000 0.00 0.00 0.00 3.51
6385 6720 4.739046 TTGCAAATTGGTTTAATTGCCG 57.261 36.364 0.00 0.00 38.93 5.69
6387 6722 7.699812 TCAGTTTTTGCAAATTGGTTTAATTGC 59.300 29.630 13.65 2.58 38.93 3.56
6388 6723 9.733219 ATCAGTTTTTGCAAATTGGTTTAATTG 57.267 25.926 13.65 9.32 38.93 2.32
6390 6725 8.281893 CGATCAGTTTTTGCAAATTGGTTTAAT 58.718 29.630 13.65 2.01 31.94 1.40
6392 6727 6.758886 ACGATCAGTTTTTGCAAATTGGTTTA 59.241 30.769 13.65 0.00 31.94 2.01
6396 6731 6.949578 ATACGATCAGTTTTTGCAAATTGG 57.050 33.333 13.65 3.66 31.94 3.16
6417 6752 7.574217 GCAAGAACACGGGAATAACTGAAAATA 60.574 37.037 0.00 0.00 0.00 1.40
6422 6758 3.071479 GCAAGAACACGGGAATAACTGA 58.929 45.455 0.00 0.00 0.00 3.41
6451 6788 7.727578 AGGGAAGTTAACAAAAAGAAAAGGA 57.272 32.000 8.61 0.00 0.00 3.36
6520 6858 3.263261 GAAAGTAGCTGCTAACCCTGTC 58.737 50.000 11.57 5.64 0.00 3.51
6522 6860 2.633488 GGAAAGTAGCTGCTAACCCTG 58.367 52.381 11.57 0.00 0.00 4.45
6527 6865 0.611200 TGGCGGAAAGTAGCTGCTAA 59.389 50.000 11.57 0.00 37.76 3.09
6542 6880 2.202703 GGGCACGTAGTACTGGCG 60.203 66.667 16.57 16.57 41.61 5.69
6559 6897 3.419915 GCATAATGCTCAACAGAACACG 58.580 45.455 0.00 0.00 40.96 4.49
6608 6946 1.155889 CTCGTTGCCATTGTACTGCA 58.844 50.000 0.00 0.00 0.00 4.41
6674 7012 5.967088 TCAATCTAACTCCTTACAGCTGAC 58.033 41.667 23.35 0.00 0.00 3.51
6680 7018 9.567776 TTCAATGTTTCAATCTAACTCCTTACA 57.432 29.630 0.00 0.00 0.00 2.41
6711 7049 0.392706 CAAAGCCACCCAGGTTTTCC 59.607 55.000 0.00 0.00 46.48 3.13
6754 7092 6.546403 GCCCGATGTATAGAGAACTGGATATA 59.454 42.308 0.00 0.00 0.00 0.86
6823 7161 5.224888 TGTAAAATCTGTCTTCGCGTAAGT 58.775 37.500 5.77 0.00 41.68 2.24
6830 7168 6.478588 GGCAATACTGTAAAATCTGTCTTCG 58.521 40.000 0.00 0.00 0.00 3.79
6841 7179 5.950758 ACATGTTTCGGCAATACTGTAAA 57.049 34.783 0.00 0.00 0.00 2.01
6845 7183 4.143347 GCAAAACATGTTTCGGCAATACTG 60.143 41.667 28.81 19.69 34.77 2.74
6871 7209 9.862149 GATATTAAGAAGAAAACTTCCCCCATA 57.138 33.333 0.00 0.00 34.08 2.74
6874 7212 6.238676 GCGATATTAAGAAGAAAACTTCCCCC 60.239 42.308 0.00 0.00 34.08 5.40
6955 7293 6.578944 GGGTGTCAAAACCTCTAAACAATTT 58.421 36.000 0.00 0.00 40.35 1.82
6956 7294 5.221165 CGGGTGTCAAAACCTCTAAACAATT 60.221 40.000 0.00 0.00 40.35 2.32
6980 7318 2.607187 AGCAGCAGTGTAACGTATGAC 58.393 47.619 0.00 0.00 45.86 3.06
6986 7324 5.508224 GCTTTAAAATAGCAGCAGTGTAACG 59.492 40.000 0.00 0.00 39.34 3.18
7010 7350 0.178992 TTCCACAGGCACAAGAAGGG 60.179 55.000 0.00 0.00 0.00 3.95
7014 7354 0.836606 TCACTTCCACAGGCACAAGA 59.163 50.000 0.00 0.00 0.00 3.02
7047 7390 0.597568 TGCAAATATAGGCGGCATGC 59.402 50.000 13.08 9.90 45.38 4.06
7113 7456 8.102800 TCATATGCATAAATTTAGCACAGAGG 57.897 34.615 11.13 9.70 41.60 3.69
7137 7480 6.362248 TCCTGGTTGGCCTATTTATAGTTTC 58.638 40.000 3.32 0.00 35.26 2.78
7166 7509 3.759618 CAGTTACCGGATAGAGGAGGATC 59.240 52.174 9.46 0.00 0.00 3.36
7179 7522 0.179084 ATGTCATCGCCAGTTACCGG 60.179 55.000 0.00 0.00 0.00 5.28
7190 7533 4.316722 CGAAGCGAAAACTCTATGTCATCG 60.317 45.833 0.00 0.00 38.70 3.84
7358 7716 1.372748 CAAAATTTCGGCGCTGGCA 60.373 52.632 17.88 3.22 42.47 4.92
7365 7723 3.123453 GCTTGAATCCACAAAATTTCGGC 59.877 43.478 0.00 0.00 0.00 5.54
7377 7735 1.825090 ATTCAGTGCGCTTGAATCCA 58.175 45.000 25.08 9.80 0.00 3.41
7387 7745 7.763172 AAAAGAGATACTAGAATTCAGTGCG 57.237 36.000 8.44 0.00 0.00 5.34
7396 7754 8.898761 TGTGCAAAACAAAAAGAGATACTAGAA 58.101 29.630 0.00 0.00 35.24 2.10
7402 7760 9.985318 CAAATTTGTGCAAAACAAAAAGAGATA 57.015 25.926 10.15 0.00 44.97 1.98
7451 7810 1.119684 GTTGTGGGGTCAGCCTTTTT 58.880 50.000 0.00 0.00 34.45 1.94
7456 7815 0.953960 CGTAAGTTGTGGGGTCAGCC 60.954 60.000 0.00 0.00 0.00 4.85
7474 7833 3.354771 GTGCAACGAGAATTCTACACG 57.645 47.619 8.25 10.58 0.00 4.49
7494 7853 0.597568 TTTTGGCAAGCATGGAGACG 59.402 50.000 0.00 0.00 0.00 4.18
7513 7872 2.174854 AGTTGGAAGCAAACCCAGTAGT 59.825 45.455 0.00 0.00 33.43 2.73
7519 7878 2.979814 AAACAGTTGGAAGCAAACCC 57.020 45.000 0.00 0.00 0.00 4.11
7679 8038 7.611467 TGCAAGTCTACAATCATTTATCCTTGT 59.389 33.333 0.00 0.00 36.00 3.16
7686 8045 5.703592 ACCGTTGCAAGTCTACAATCATTTA 59.296 36.000 0.00 0.00 0.00 1.40
7692 8051 3.880490 TGAAACCGTTGCAAGTCTACAAT 59.120 39.130 0.00 0.00 0.00 2.71
7714 8073 1.005690 GGTGGGGGATAGGGAGGTT 59.994 63.158 0.00 0.00 0.00 3.50
7724 8083 3.632049 TCCATGGGAGGTGGGGGA 61.632 66.667 13.02 0.00 37.34 4.81
7758 8117 0.108138 ACTATCCGTCCTTGCTGCAC 60.108 55.000 0.00 0.00 0.00 4.57
7805 8164 2.260154 CGGCATGTCACACTTGGCA 61.260 57.895 14.02 0.00 45.15 4.92
7806 8165 2.562912 CGGCATGTCACACTTGGC 59.437 61.111 0.00 6.14 42.70 4.52
7807 8166 0.673333 TAGCGGCATGTCACACTTGG 60.673 55.000 1.45 0.00 0.00 3.61
7809 8168 2.113860 ATTAGCGGCATGTCACACTT 57.886 45.000 1.45 0.00 0.00 3.16
7810 8169 2.009774 GAATTAGCGGCATGTCACACT 58.990 47.619 1.45 0.00 0.00 3.55
7811 8170 1.267532 CGAATTAGCGGCATGTCACAC 60.268 52.381 1.45 0.00 0.00 3.82
7812 8171 1.006086 CGAATTAGCGGCATGTCACA 58.994 50.000 1.45 0.00 0.00 3.58
7813 8172 0.304705 CCGAATTAGCGGCATGTCAC 59.695 55.000 1.45 0.00 45.38 3.67
7822 8181 3.187700 AGTTTCTAGCACCGAATTAGCG 58.812 45.455 0.00 0.00 0.00 4.26
7823 8182 5.447413 GGAAAGTTTCTAGCACCGAATTAGC 60.447 44.000 15.05 0.00 0.00 3.09
7824 8183 5.220416 CGGAAAGTTTCTAGCACCGAATTAG 60.220 44.000 15.05 0.00 41.09 1.73
7825 8184 4.628333 CGGAAAGTTTCTAGCACCGAATTA 59.372 41.667 15.05 0.00 41.09 1.40
7826 8185 3.435671 CGGAAAGTTTCTAGCACCGAATT 59.564 43.478 15.05 0.00 41.09 2.17
7827 8186 3.000727 CGGAAAGTTTCTAGCACCGAAT 58.999 45.455 15.05 0.00 41.09 3.34
7828 8187 2.224113 ACGGAAAGTTTCTAGCACCGAA 60.224 45.455 15.05 0.00 41.09 4.30
7829 8188 1.342174 ACGGAAAGTTTCTAGCACCGA 59.658 47.619 15.05 0.00 41.09 4.69
7830 8189 1.792006 ACGGAAAGTTTCTAGCACCG 58.208 50.000 15.05 11.80 43.61 4.94
7831 8190 3.135994 TCAACGGAAAGTTTCTAGCACC 58.864 45.455 15.05 0.00 42.02 5.01
7832 8191 4.806342 TTCAACGGAAAGTTTCTAGCAC 57.194 40.909 15.05 0.00 42.02 4.40
7833 8192 5.642063 CCTATTCAACGGAAAGTTTCTAGCA 59.358 40.000 15.05 0.00 42.02 3.49
7834 8193 5.064834 CCCTATTCAACGGAAAGTTTCTAGC 59.935 44.000 15.05 0.00 42.02 3.42
7835 8194 6.092259 CACCCTATTCAACGGAAAGTTTCTAG 59.908 42.308 15.05 11.71 42.02 2.43
7836 8195 5.935789 CACCCTATTCAACGGAAAGTTTCTA 59.064 40.000 15.05 0.00 42.02 2.10
7837 8196 4.760204 CACCCTATTCAACGGAAAGTTTCT 59.240 41.667 15.05 0.00 42.02 2.52
7838 8197 4.758165 TCACCCTATTCAACGGAAAGTTTC 59.242 41.667 7.09 7.09 42.02 2.78
7839 8198 4.721132 TCACCCTATTCAACGGAAAGTTT 58.279 39.130 0.00 0.00 42.02 2.66
7840 8199 4.360951 TCACCCTATTCAACGGAAAGTT 57.639 40.909 0.00 0.00 45.45 2.66
7841 8200 4.569719 ATCACCCTATTCAACGGAAAGT 57.430 40.909 0.00 0.00 36.43 2.66
7842 8201 5.753921 GTCTATCACCCTATTCAACGGAAAG 59.246 44.000 0.00 0.00 36.43 2.62
7843 8202 5.188163 TGTCTATCACCCTATTCAACGGAAA 59.812 40.000 0.00 0.00 36.43 3.13
7844 8203 4.712829 TGTCTATCACCCTATTCAACGGAA 59.287 41.667 0.00 0.00 37.45 4.30
7845 8204 4.098960 GTGTCTATCACCCTATTCAACGGA 59.901 45.833 0.00 0.00 40.84 4.69
7846 8205 4.369182 GTGTCTATCACCCTATTCAACGG 58.631 47.826 0.00 0.00 40.84 4.44
7847 8206 4.042398 CGTGTCTATCACCCTATTCAACG 58.958 47.826 0.00 0.00 43.51 4.10
7848 8207 5.258456 TCGTGTCTATCACCCTATTCAAC 57.742 43.478 0.00 0.00 43.51 3.18
7851 8210 4.738740 CGTTTCGTGTCTATCACCCTATTC 59.261 45.833 0.00 0.00 43.51 1.75
7855 8214 2.165167 TCGTTTCGTGTCTATCACCCT 58.835 47.619 0.00 0.00 43.51 4.34
7859 8218 4.171005 GGTTCATCGTTTCGTGTCTATCA 58.829 43.478 0.00 0.00 0.00 2.15
7862 8221 3.311106 GTGGTTCATCGTTTCGTGTCTA 58.689 45.455 0.00 0.00 0.00 2.59
7864 8223 1.193874 GGTGGTTCATCGTTTCGTGTC 59.806 52.381 0.00 0.00 0.00 3.67
7866 8225 1.222300 TGGTGGTTCATCGTTTCGTG 58.778 50.000 0.00 0.00 0.00 4.35
7867 8226 2.073816 GATGGTGGTTCATCGTTTCGT 58.926 47.619 0.00 0.00 34.90 3.85
7868 8227 2.806288 GATGGTGGTTCATCGTTTCG 57.194 50.000 0.00 0.00 34.90 3.46
7875 8234 4.020573 TCAAACTAGACGATGGTGGTTCAT 60.021 41.667 0.00 0.00 0.00 2.57
7880 8239 3.927142 GTCTTCAAACTAGACGATGGTGG 59.073 47.826 0.00 0.00 33.39 4.61
7893 10043 0.721718 CATCCTCGCGGTCTTCAAAC 59.278 55.000 6.13 0.00 0.00 2.93
7897 10047 1.135083 TCTTTCATCCTCGCGGTCTTC 60.135 52.381 6.13 0.00 0.00 2.87
7905 10055 2.517450 GGCGCGTCTTTCATCCTCG 61.517 63.158 8.43 0.00 0.00 4.63
7907 10057 2.298158 ATCGGCGCGTCTTTCATCCT 62.298 55.000 9.90 0.00 0.00 3.24
7922 10072 2.428890 AGAGAGAGTTGGTTAGCATCGG 59.571 50.000 0.00 0.00 0.00 4.18
7925 10075 4.573900 CACAAGAGAGAGTTGGTTAGCAT 58.426 43.478 0.00 0.00 0.00 3.79
7993 10143 9.736414 TCTAGTCTACAACAACTACAACTCTAT 57.264 33.333 0.00 0.00 0.00 1.98
7994 10144 9.565090 TTCTAGTCTACAACAACTACAACTCTA 57.435 33.333 0.00 0.00 0.00 2.43
7995 10145 8.461249 TTCTAGTCTACAACAACTACAACTCT 57.539 34.615 0.00 0.00 0.00 3.24
7996 10146 7.808856 CCTTCTAGTCTACAACAACTACAACTC 59.191 40.741 0.00 0.00 0.00 3.01
7997 10147 7.659186 CCTTCTAGTCTACAACAACTACAACT 58.341 38.462 0.00 0.00 0.00 3.16
7998 10148 6.365518 GCCTTCTAGTCTACAACAACTACAAC 59.634 42.308 0.00 0.00 0.00 3.32
7999 10149 6.453092 GCCTTCTAGTCTACAACAACTACAA 58.547 40.000 0.00 0.00 0.00 2.41
8000 10150 5.047519 GGCCTTCTAGTCTACAACAACTACA 60.048 44.000 0.00 0.00 0.00 2.74
8001 10151 5.047519 TGGCCTTCTAGTCTACAACAACTAC 60.048 44.000 3.32 0.00 0.00 2.73
8002 10152 5.081728 TGGCCTTCTAGTCTACAACAACTA 58.918 41.667 3.32 0.00 0.00 2.24
8003 10153 3.901844 TGGCCTTCTAGTCTACAACAACT 59.098 43.478 3.32 0.00 0.00 3.16
8004 10154 4.267349 TGGCCTTCTAGTCTACAACAAC 57.733 45.455 3.32 0.00 0.00 3.32
8005 10155 4.967084 TTGGCCTTCTAGTCTACAACAA 57.033 40.909 3.32 0.00 0.00 2.83
8006 10156 6.614694 TTATTGGCCTTCTAGTCTACAACA 57.385 37.500 3.32 0.00 0.00 3.33
8007 10157 8.639761 TCTATTATTGGCCTTCTAGTCTACAAC 58.360 37.037 3.32 0.00 0.00 3.32
8008 10158 8.777578 TCTATTATTGGCCTTCTAGTCTACAA 57.222 34.615 3.32 0.00 0.00 2.41
8009 10159 8.777578 TTCTATTATTGGCCTTCTAGTCTACA 57.222 34.615 3.32 0.00 0.00 2.74
8012 10162 8.379331 GGATTTCTATTATTGGCCTTCTAGTCT 58.621 37.037 3.32 0.00 0.00 3.24
8013 10163 8.157476 TGGATTTCTATTATTGGCCTTCTAGTC 58.843 37.037 3.32 0.00 0.00 2.59
8014 10164 8.045720 TGGATTTCTATTATTGGCCTTCTAGT 57.954 34.615 3.32 0.00 0.00 2.57
8015 10165 7.120432 GCTGGATTTCTATTATTGGCCTTCTAG 59.880 40.741 3.32 0.00 0.00 2.43
8016 10166 6.942576 GCTGGATTTCTATTATTGGCCTTCTA 59.057 38.462 3.32 0.00 0.00 2.10
8017 10167 5.772169 GCTGGATTTCTATTATTGGCCTTCT 59.228 40.000 3.32 0.00 0.00 2.85
8018 10168 5.536161 TGCTGGATTTCTATTATTGGCCTTC 59.464 40.000 3.32 0.00 0.00 3.46
8019 10169 5.302823 GTGCTGGATTTCTATTATTGGCCTT 59.697 40.000 3.32 0.00 0.00 4.35
8020 10170 4.829492 GTGCTGGATTTCTATTATTGGCCT 59.171 41.667 3.32 0.00 0.00 5.19
8021 10171 4.829492 AGTGCTGGATTTCTATTATTGGCC 59.171 41.667 0.00 0.00 0.00 5.36
8022 10172 5.048434 GGAGTGCTGGATTTCTATTATTGGC 60.048 44.000 0.00 0.00 0.00 4.52
8023 10173 6.016777 GTGGAGTGCTGGATTTCTATTATTGG 60.017 42.308 0.00 0.00 0.00 3.16
8024 10174 6.293081 CGTGGAGTGCTGGATTTCTATTATTG 60.293 42.308 0.00 0.00 0.00 1.90
8025 10175 5.760253 CGTGGAGTGCTGGATTTCTATTATT 59.240 40.000 0.00 0.00 0.00 1.40
8026 10176 5.300752 CGTGGAGTGCTGGATTTCTATTAT 58.699 41.667 0.00 0.00 0.00 1.28
8027 10177 4.442893 CCGTGGAGTGCTGGATTTCTATTA 60.443 45.833 0.00 0.00 0.00 0.98
8028 10178 3.535561 CGTGGAGTGCTGGATTTCTATT 58.464 45.455 0.00 0.00 0.00 1.73
8029 10179 2.158900 CCGTGGAGTGCTGGATTTCTAT 60.159 50.000 0.00 0.00 0.00 1.98
8030 10180 1.207089 CCGTGGAGTGCTGGATTTCTA 59.793 52.381 0.00 0.00 0.00 2.10
8031 10181 0.036010 CCGTGGAGTGCTGGATTTCT 60.036 55.000 0.00 0.00 0.00 2.52
8032 10182 1.026718 CCCGTGGAGTGCTGGATTTC 61.027 60.000 0.00 0.00 0.00 2.17
8033 10183 1.002134 CCCGTGGAGTGCTGGATTT 60.002 57.895 0.00 0.00 0.00 2.17
8034 10184 2.671070 CCCGTGGAGTGCTGGATT 59.329 61.111 0.00 0.00 0.00 3.01
8035 10185 3.402681 CCCCGTGGAGTGCTGGAT 61.403 66.667 0.00 0.00 0.00 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.