Multiple sequence alignment - TraesCS7B01G347400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G347400 chr7B 100.000 2399 0 0 1 2399 603745568 603747966 0.000000e+00 4431.0
1 TraesCS7B01G347400 chr7B 87.629 1261 73 26 613 1848 603995881 603997083 0.000000e+00 1387.0
2 TraesCS7B01G347400 chr7B 82.857 665 56 21 1203 1848 603835488 603836113 6.550000e-151 544.0
3 TraesCS7B01G347400 chr7B 89.724 399 22 7 1 386 603995346 603995738 2.410000e-135 492.0
4 TraesCS7B01G347400 chr7B 90.698 172 15 1 383 554 641152372 641152202 7.490000e-56 228.0
5 TraesCS7B01G347400 chr7B 88.235 119 12 2 666 783 603834420 603834537 1.000000e-29 141.0
6 TraesCS7B01G347400 chr7B 100.000 60 0 0 2631 2690 603748198 603748257 7.870000e-21 111.0
7 TraesCS7B01G347400 chr7A 92.788 721 36 5 552 1265 642188396 642189107 0.000000e+00 1029.0
8 TraesCS7B01G347400 chr7A 86.981 699 55 13 1155 1848 642188952 642189619 0.000000e+00 754.0
9 TraesCS7B01G347400 chr7A 92.163 319 18 4 1 317 642188043 642188356 6.830000e-121 444.0
10 TraesCS7B01G347400 chr7A 99.471 189 1 0 2211 2399 731978206 731978018 7.130000e-91 344.0
11 TraesCS7B01G347400 chr7A 100.000 60 0 0 2631 2690 731978029 731977970 7.870000e-21 111.0
12 TraesCS7B01G347400 chr7A 86.667 90 6 3 17 104 515737613 515737528 7.930000e-16 95.3
13 TraesCS7B01G347400 chr7A 83.333 102 10 5 6 104 247179441 247179538 1.330000e-13 87.9
14 TraesCS7B01G347400 chr7D 89.948 776 50 10 549 1303 556469400 556470168 0.000000e+00 976.0
15 TraesCS7B01G347400 chr7D 90.735 680 50 7 1154 1824 556469971 556470646 0.000000e+00 894.0
16 TraesCS7B01G347400 chr7D 97.354 189 5 0 2211 2399 376939330 376939518 3.340000e-84 322.0
17 TraesCS7B01G347400 chr7D 100.000 58 0 0 2631 2688 376939507 376939564 1.020000e-19 108.0
18 TraesCS7B01G347400 chr4A 93.750 224 14 0 1882 2105 559491297 559491520 1.190000e-88 337.0
19 TraesCS7B01G347400 chr4A 98.396 187 3 0 2213 2399 648523055 648522869 2.000000e-86 329.0
20 TraesCS7B01G347400 chr4A 97.884 189 3 1 2211 2399 633355516 633355703 2.580000e-85 326.0
21 TraesCS7B01G347400 chr4A 94.944 178 8 1 1918 2095 623384416 623384240 7.330000e-71 278.0
22 TraesCS7B01G347400 chr4A 88.235 187 18 4 380 566 362067906 362068088 1.250000e-53 220.0
23 TraesCS7B01G347400 chr4A 100.000 58 0 0 2631 2688 648522880 648522823 1.020000e-19 108.0
24 TraesCS7B01G347400 chr4A 98.333 60 1 0 2631 2690 633355692 633355751 3.660000e-19 106.0
25 TraesCS7B01G347400 chr4A 96.552 58 2 0 2631 2688 721919401 721919458 2.200000e-16 97.1
26 TraesCS7B01G347400 chr4A 86.813 91 7 3 16 104 742356773 742356860 2.200000e-16 97.1
27 TraesCS7B01G347400 chr4A 82.857 105 13 3 1 103 43705093 43705194 3.690000e-14 89.8
28 TraesCS7B01G347400 chr1B 98.421 190 3 0 2210 2399 665250447 665250258 4.290000e-88 335.0
29 TraesCS7B01G347400 chr1B 89.714 175 17 1 379 553 519817977 519817804 3.490000e-54 222.0
30 TraesCS7B01G347400 chr1B 97.647 85 2 0 2093 2177 24502845 24502761 2.160000e-31 147.0
31 TraesCS7B01G347400 chr1B 100.000 60 0 0 2631 2690 421499151 421499210 7.870000e-21 111.0
32 TraesCS7B01G347400 chr2B 97.884 189 4 0 2211 2399 793458909 793459097 7.180000e-86 327.0
33 TraesCS7B01G347400 chr2B 91.589 214 15 2 1882 2094 761985984 761986195 2.620000e-75 292.0
34 TraesCS7B01G347400 chr2B 95.604 91 3 1 2084 2174 245689726 245689815 7.760000e-31 145.0
35 TraesCS7B01G347400 chr2D 98.370 184 3 0 2216 2399 68862732 68862549 9.290000e-85 324.0
36 TraesCS7B01G347400 chr2D 96.296 189 7 0 2211 2399 630836282 630836470 7.230000e-81 311.0
37 TraesCS7B01G347400 chr2D 87.273 220 18 6 1882 2095 97629020 97629235 2.680000e-60 243.0
38 TraesCS7B01G347400 chr2D 87.368 190 19 5 373 561 516708299 516708484 2.100000e-51 213.0
39 TraesCS7B01G347400 chr2D 98.276 58 1 0 2631 2688 630836459 630836516 4.740000e-18 102.0
40 TraesCS7B01G347400 chr2D 96.552 58 2 0 2631 2688 68862560 68862503 2.200000e-16 97.1
41 TraesCS7B01G347400 chr6D 96.825 189 6 0 2211 2399 8028822 8029010 1.550000e-82 316.0
42 TraesCS7B01G347400 chr6D 89.831 177 15 3 385 560 389700541 389700715 9.690000e-55 224.0
43 TraesCS7B01G347400 chr6D 100.000 58 0 0 2631 2688 363870574 363870631 1.020000e-19 108.0
44 TraesCS7B01G347400 chr6D 88.889 72 5 3 1 71 454218152 454218221 4.770000e-13 86.1
45 TraesCS7B01G347400 chr2A 89.516 248 16 9 1849 2095 37095765 37096003 3.360000e-79 305.0
46 TraesCS7B01G347400 chr5A 94.681 188 10 0 1908 2095 84126946 84126759 2.620000e-75 292.0
47 TraesCS7B01G347400 chr5A 85.106 94 9 3 16 107 442697563 442697473 1.030000e-14 91.6
48 TraesCS7B01G347400 chrUn 87.783 221 16 6 1882 2095 1077473 1077689 5.750000e-62 248.0
49 TraesCS7B01G347400 chrUn 87.783 221 16 6 1882 2095 314685605 314685821 5.750000e-62 248.0
50 TraesCS7B01G347400 chr3D 85.909 220 21 6 1882 2095 496788588 496788803 2.690000e-55 226.0
51 TraesCS7B01G347400 chr3D 92.857 98 5 2 2081 2177 186291450 186291354 1.000000e-29 141.0
52 TraesCS7B01G347400 chr3B 90.173 173 15 2 385 556 54082911 54083082 9.690000e-55 224.0
53 TraesCS7B01G347400 chr3B 97.727 88 1 1 2087 2173 631004530 631004617 1.670000e-32 150.0
54 TraesCS7B01G347400 chr3A 90.230 174 14 2 383 556 649812006 649811836 9.690000e-55 224.0
55 TraesCS7B01G347400 chr3A 100.000 60 0 0 2631 2690 194468691 194468632 7.870000e-21 111.0
56 TraesCS7B01G347400 chr1D 89.714 175 17 1 385 559 238940380 238940207 3.490000e-54 222.0
57 TraesCS7B01G347400 chr4D 89.266 177 16 2 371 547 477898783 477898956 4.510000e-53 219.0
58 TraesCS7B01G347400 chr6B 96.703 91 3 0 2087 2177 553380251 553380341 4.640000e-33 152.0
59 TraesCS7B01G347400 chr6B 98.810 84 1 0 2091 2174 128924768 128924851 1.670000e-32 150.0
60 TraesCS7B01G347400 chr6B 85.714 91 7 3 16 104 559472426 559472340 1.030000e-14 91.6
61 TraesCS7B01G347400 chr5B 98.810 84 1 0 2094 2177 466350072 466349989 1.670000e-32 150.0
62 TraesCS7B01G347400 chr5B 98.810 84 1 0 2094 2177 671453542 671453625 1.670000e-32 150.0
63 TraesCS7B01G347400 chr5B 98.276 58 1 0 2631 2688 34908265 34908322 4.740000e-18 102.0
64 TraesCS7B01G347400 chr5B 96.552 58 2 0 2631 2688 326892609 326892666 2.200000e-16 97.1
65 TraesCS7B01G347400 chr4B 98.810 84 1 0 2094 2177 656837172 656837089 1.670000e-32 150.0
66 TraesCS7B01G347400 chr4B 96.552 58 2 0 2631 2688 448536206 448536263 2.200000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G347400 chr7B 603745568 603748257 2689 False 2271.000000 4431 100.0000 1 2690 2 chr7B.!!$F1 2689
1 TraesCS7B01G347400 chr7B 603995346 603997083 1737 False 939.500000 1387 88.6765 1 1848 2 chr7B.!!$F3 1847
2 TraesCS7B01G347400 chr7B 603834420 603836113 1693 False 342.500000 544 85.5460 666 1848 2 chr7B.!!$F2 1182
3 TraesCS7B01G347400 chr7A 642188043 642189619 1576 False 742.333333 1029 90.6440 1 1848 3 chr7A.!!$F2 1847
4 TraesCS7B01G347400 chr7D 556469400 556470646 1246 False 935.000000 976 90.3415 549 1824 2 chr7D.!!$F2 1275

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
399 414 0.259356 CCTCTACTCCCTCCGTTCCT 59.741 60.0 0.0 0.0 0.0 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2069 2904 0.036164 ATTTGCAGTCGTACAGCCCA 59.964 50.0 0.0 0.0 28.67 5.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
116 117 5.469084 GTGGAGTAAAAACAAGGAGGTAGTG 59.531 44.000 0.00 0.00 0.00 2.74
186 190 1.177401 GAAAGGTGGTGGAGGATTGC 58.823 55.000 0.00 0.00 0.00 3.56
189 193 0.706433 AGGTGGTGGAGGATTGCAAT 59.294 50.000 12.83 12.83 0.00 3.56
194 198 4.210331 GTGGTGGAGGATTGCAATCTATT 58.790 43.478 32.48 20.92 35.73 1.73
236 242 3.704566 GACCCCTTTCCAAAGTTGTTCTT 59.295 43.478 0.00 0.00 38.10 2.52
237 243 4.874199 ACCCCTTTCCAAAGTTGTTCTTA 58.126 39.130 0.00 0.00 35.02 2.10
238 244 4.893524 ACCCCTTTCCAAAGTTGTTCTTAG 59.106 41.667 0.00 0.00 35.02 2.18
239 245 4.893524 CCCCTTTCCAAAGTTGTTCTTAGT 59.106 41.667 0.00 0.00 35.02 2.24
247 253 7.502696 TCCAAAGTTGTTCTTAGTAGTTAGCA 58.497 34.615 0.00 0.00 35.02 3.49
251 257 6.456501 AGTTGTTCTTAGTAGTTAGCACCAG 58.543 40.000 0.00 0.00 0.00 4.00
273 279 1.479323 CCTCCATGGAAATGCAAGGTG 59.521 52.381 17.00 0.00 38.35 4.00
284 290 6.495181 TGGAAATGCAAGGTGGTAGAATTTTA 59.505 34.615 0.00 0.00 0.00 1.52
291 297 7.669722 TGCAAGGTGGTAGAATTTTAAATCTCT 59.330 33.333 0.00 0.67 0.00 3.10
323 338 5.598417 GGTTTGCCCTTTCAGATATACCAAT 59.402 40.000 0.00 0.00 0.00 3.16
344 359 1.134491 GGTAACCCCTCCAATCGACAG 60.134 57.143 0.00 0.00 0.00 3.51
386 401 3.134574 TGCTCTAGCTCTAGCCTCTAC 57.865 52.381 15.51 0.00 43.38 2.59
388 403 3.244422 TGCTCTAGCTCTAGCCTCTACTC 60.244 52.174 15.51 0.00 43.38 2.59
389 404 3.868754 GCTCTAGCTCTAGCCTCTACTCC 60.869 56.522 8.67 0.00 43.38 3.85
390 405 2.640826 TCTAGCTCTAGCCTCTACTCCC 59.359 54.545 0.00 0.00 43.38 4.30
392 407 1.423921 AGCTCTAGCCTCTACTCCCTC 59.576 57.143 0.00 0.00 43.38 4.30
394 409 0.766131 TCTAGCCTCTACTCCCTCCG 59.234 60.000 0.00 0.00 0.00 4.63
395 410 0.475044 CTAGCCTCTACTCCCTCCGT 59.525 60.000 0.00 0.00 0.00 4.69
396 411 0.924823 TAGCCTCTACTCCCTCCGTT 59.075 55.000 0.00 0.00 0.00 4.44
397 412 0.396001 AGCCTCTACTCCCTCCGTTC 60.396 60.000 0.00 0.00 0.00 3.95
398 413 1.393487 GCCTCTACTCCCTCCGTTCC 61.393 65.000 0.00 0.00 0.00 3.62
399 414 0.259356 CCTCTACTCCCTCCGTTCCT 59.741 60.000 0.00 0.00 0.00 3.36
400 415 1.493871 CCTCTACTCCCTCCGTTCCTA 59.506 57.143 0.00 0.00 0.00 2.94
401 416 2.091994 CCTCTACTCCCTCCGTTCCTAA 60.092 54.545 0.00 0.00 0.00 2.69
402 417 3.626729 CCTCTACTCCCTCCGTTCCTAAA 60.627 52.174 0.00 0.00 0.00 1.85
403 418 4.216708 CTCTACTCCCTCCGTTCCTAAAT 58.783 47.826 0.00 0.00 0.00 1.40
404 419 5.383476 CTCTACTCCCTCCGTTCCTAAATA 58.617 45.833 0.00 0.00 0.00 1.40
405 420 5.961897 TCTACTCCCTCCGTTCCTAAATAT 58.038 41.667 0.00 0.00 0.00 1.28
406 421 6.379579 TCTACTCCCTCCGTTCCTAAATATT 58.620 40.000 0.00 0.00 0.00 1.28
407 422 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
408 423 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
409 424 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
410 425 5.677567 TCCCTCCGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
411 426 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
412 427 6.069847 TCCCTCCGTTCCTAAATATTTGTCTT 60.070 38.462 11.05 0.00 0.00 3.01
413 428 6.602009 CCCTCCGTTCCTAAATATTTGTCTTT 59.398 38.462 11.05 0.00 0.00 2.52
414 429 7.122204 CCCTCCGTTCCTAAATATTTGTCTTTT 59.878 37.037 11.05 0.00 0.00 2.27
415 430 8.520351 CCTCCGTTCCTAAATATTTGTCTTTTT 58.480 33.333 11.05 0.00 0.00 1.94
505 520 9.865321 AATATATATTCGTATTTGGTAGTGCGT 57.135 29.630 1.91 0.00 0.00 5.24
506 521 9.865321 ATATATATTCGTATTTGGTAGTGCGTT 57.135 29.630 0.00 0.00 0.00 4.84
507 522 6.913873 ATATTCGTATTTGGTAGTGCGTTT 57.086 33.333 0.00 0.00 0.00 3.60
508 523 4.392619 TTCGTATTTGGTAGTGCGTTTG 57.607 40.909 0.00 0.00 0.00 2.93
509 524 3.651206 TCGTATTTGGTAGTGCGTTTGA 58.349 40.909 0.00 0.00 0.00 2.69
510 525 4.056740 TCGTATTTGGTAGTGCGTTTGAA 58.943 39.130 0.00 0.00 0.00 2.69
511 526 4.510711 TCGTATTTGGTAGTGCGTTTGAAA 59.489 37.500 0.00 0.00 0.00 2.69
512 527 5.179742 TCGTATTTGGTAGTGCGTTTGAAAT 59.820 36.000 0.00 0.00 0.00 2.17
513 528 5.506832 CGTATTTGGTAGTGCGTTTGAAATC 59.493 40.000 0.00 0.00 0.00 2.17
514 529 5.705609 ATTTGGTAGTGCGTTTGAAATCT 57.294 34.783 0.00 0.00 0.00 2.40
515 530 4.742438 TTGGTAGTGCGTTTGAAATCTC 57.258 40.909 0.00 0.00 0.00 2.75
516 531 4.002906 TGGTAGTGCGTTTGAAATCTCT 57.997 40.909 0.00 0.00 0.00 3.10
545 560 6.769134 AAACAAATATTTAGGAACGGAGGG 57.231 37.500 0.00 0.00 0.00 4.30
546 561 5.703730 ACAAATATTTAGGAACGGAGGGA 57.296 39.130 0.00 0.00 0.00 4.20
547 562 6.069705 ACAAATATTTAGGAACGGAGGGAA 57.930 37.500 0.00 0.00 0.00 3.97
559 574 8.674925 AGGAACGGAGGGAATAATATATACAA 57.325 34.615 0.00 0.00 0.00 2.41
618 646 5.185454 TGTCATAGGGTGTAATCAAAGCAG 58.815 41.667 0.00 0.00 0.00 4.24
633 689 0.813184 AGCAGGATTTCAACCATGCG 59.187 50.000 0.00 0.00 36.99 4.73
740 817 2.151202 CAACTTGTAATGGCGTGGACT 58.849 47.619 0.00 0.00 0.00 3.85
745 822 0.673644 GTAATGGCGTGGACTGTGCT 60.674 55.000 0.00 0.00 0.00 4.40
831 1569 8.558973 AGTTTACGTAGACACTAGACAGTAAT 57.441 34.615 17.50 0.00 32.21 1.89
832 1570 9.658799 AGTTTACGTAGACACTAGACAGTAATA 57.341 33.333 17.50 0.00 32.21 0.98
833 1571 9.695884 GTTTACGTAGACACTAGACAGTAATAC 57.304 37.037 11.13 0.00 32.21 1.89
834 1572 9.435688 TTTACGTAGACACTAGACAGTAATACA 57.564 33.333 0.00 0.00 32.21 2.29
835 1573 9.605275 TTACGTAGACACTAGACAGTAATACAT 57.395 33.333 0.00 0.00 32.21 2.29
836 1574 8.140677 ACGTAGACACTAGACAGTAATACATC 57.859 38.462 0.00 0.00 32.21 3.06
854 1592 8.526218 AATACATCTACATCTACGCATCTTTG 57.474 34.615 0.00 0.00 0.00 2.77
944 1688 5.834204 AGAGTACACCAGTTACAGTTCTCTT 59.166 40.000 0.00 0.00 35.94 2.85
954 1698 7.254590 CCAGTTACAGTTCTCTTGAGTTTCTTG 60.255 40.741 0.00 0.00 0.00 3.02
1023 1774 3.182590 TTCAGGTGCAGCCGCTCTT 62.183 57.895 13.29 0.00 43.70 2.85
1084 1835 0.181350 GGTCATACCCTCCTTGGCAG 59.819 60.000 0.00 0.00 30.04 4.85
1085 1836 1.204146 GTCATACCCTCCTTGGCAGA 58.796 55.000 0.00 0.00 0.00 4.26
1264 2042 2.530958 GATACCACCACCACCACCGG 62.531 65.000 0.00 0.00 0.00 5.28
1276 2054 4.415150 CACCGGCACAGGCTCCAT 62.415 66.667 0.00 0.00 40.87 3.41
1383 2188 3.443045 CCACCTCGGCCATGCAAC 61.443 66.667 2.24 0.00 0.00 4.17
1418 2223 4.063967 CTACCCGGCGTGCACAGA 62.064 66.667 18.64 0.00 0.00 3.41
1440 2245 1.664873 CATAGCCTCTCTGCCGGAG 59.335 63.158 5.05 0.00 43.12 4.63
1443 2248 4.200283 GCCTCTCTGCCGGAGTCG 62.200 72.222 5.05 0.00 42.40 4.18
1445 2250 2.477176 CCTCTCTGCCGGAGTCGAG 61.477 68.421 5.05 4.87 42.40 4.04
1466 2271 0.097674 GCATGCGACGAGAAATGCTT 59.902 50.000 0.00 0.00 41.71 3.91
1520 2325 0.250234 CCCAAGATCGAGGAGTGCAA 59.750 55.000 7.92 0.00 0.00 4.08
1527 2332 1.377725 CGAGGAGTGCAAGGCCAAT 60.378 57.895 5.01 0.00 0.00 3.16
1599 2404 1.280421 GACTGCCTCTTCCCAGAATGT 59.720 52.381 0.00 0.00 33.40 2.71
1609 2414 1.524621 CCAGAATGTAGCCCCTGCG 60.525 63.158 0.00 0.00 44.33 5.18
1625 2430 4.953868 CGCGACCACCCGTCAACA 62.954 66.667 0.00 0.00 42.07 3.33
1629 2434 1.014044 CGACCACCCGTCAACATCAG 61.014 60.000 0.00 0.00 42.07 2.90
1630 2435 0.034896 GACCACCCGTCAACATCAGT 59.965 55.000 0.00 0.00 41.54 3.41
1632 2437 1.906574 ACCACCCGTCAACATCAGTAT 59.093 47.619 0.00 0.00 0.00 2.12
1636 2441 4.382685 CCACCCGTCAACATCAGTATAAGT 60.383 45.833 0.00 0.00 0.00 2.24
1727 2556 4.720649 TGTACTCCATGCTCAACTCTAC 57.279 45.455 0.00 0.00 0.00 2.59
1843 2678 8.192774 TCGTTCCATCTCGTTTATTAGTTACAT 58.807 33.333 0.00 0.00 0.00 2.29
1860 2695 9.675464 TTAGTTACATAATTGGGTTTGTCTAGG 57.325 33.333 0.00 0.00 0.00 3.02
1861 2696 7.696017 AGTTACATAATTGGGTTTGTCTAGGT 58.304 34.615 0.00 0.00 0.00 3.08
1862 2697 7.827729 AGTTACATAATTGGGTTTGTCTAGGTC 59.172 37.037 0.00 0.00 0.00 3.85
1863 2698 6.388619 ACATAATTGGGTTTGTCTAGGTCT 57.611 37.500 0.00 0.00 0.00 3.85
1864 2699 6.415573 ACATAATTGGGTTTGTCTAGGTCTC 58.584 40.000 0.00 0.00 0.00 3.36
1865 2700 4.993705 AATTGGGTTTGTCTAGGTCTCA 57.006 40.909 0.00 0.00 0.00 3.27
1866 2701 5.520748 AATTGGGTTTGTCTAGGTCTCAT 57.479 39.130 0.00 0.00 0.00 2.90
1867 2702 4.993705 TTGGGTTTGTCTAGGTCTCATT 57.006 40.909 0.00 0.00 0.00 2.57
1868 2703 4.553330 TGGGTTTGTCTAGGTCTCATTC 57.447 45.455 0.00 0.00 0.00 2.67
1869 2704 3.056107 TGGGTTTGTCTAGGTCTCATTCG 60.056 47.826 0.00 0.00 0.00 3.34
1870 2705 3.194968 GGGTTTGTCTAGGTCTCATTCGA 59.805 47.826 0.00 0.00 0.00 3.71
1871 2706 4.425520 GGTTTGTCTAGGTCTCATTCGAG 58.574 47.826 0.00 0.00 40.98 4.04
1872 2707 4.082136 GGTTTGTCTAGGTCTCATTCGAGT 60.082 45.833 0.00 0.00 40.44 4.18
1873 2708 4.703645 TTGTCTAGGTCTCATTCGAGTG 57.296 45.455 0.68 0.68 40.44 3.51
1874 2709 3.951663 TGTCTAGGTCTCATTCGAGTGA 58.048 45.455 10.44 10.44 40.44 3.41
1875 2710 3.942115 TGTCTAGGTCTCATTCGAGTGAG 59.058 47.826 27.00 27.00 45.51 3.51
1883 2718 3.679725 CTCATTCGAGTGAGACTTCTCG 58.320 50.000 28.47 18.52 46.77 4.04
1890 2725 4.014847 GAGTGAGACTTCTCGACTGATG 57.985 50.000 12.97 0.00 45.72 3.07
1891 2726 3.680490 AGTGAGACTTCTCGACTGATGA 58.320 45.455 9.28 0.00 45.72 2.92
1892 2727 3.438781 AGTGAGACTTCTCGACTGATGAC 59.561 47.826 9.28 0.00 45.72 3.06
1893 2728 3.189495 GTGAGACTTCTCGACTGATGACA 59.811 47.826 1.86 0.00 45.72 3.58
1894 2729 4.013050 TGAGACTTCTCGACTGATGACAT 58.987 43.478 1.86 0.00 45.72 3.06
1895 2730 4.095632 TGAGACTTCTCGACTGATGACATC 59.904 45.833 8.59 8.59 45.72 3.06
1896 2731 4.013050 AGACTTCTCGACTGATGACATCA 58.987 43.478 17.09 17.09 37.76 3.07
1897 2732 4.460731 AGACTTCTCGACTGATGACATCAA 59.539 41.667 18.49 3.70 39.11 2.57
1898 2733 4.489810 ACTTCTCGACTGATGACATCAAC 58.510 43.478 18.49 13.90 39.11 3.18
1899 2734 4.021981 ACTTCTCGACTGATGACATCAACA 60.022 41.667 18.49 3.00 39.11 3.33
1900 2735 4.725790 TCTCGACTGATGACATCAACAT 57.274 40.909 18.49 7.75 39.11 2.71
1901 2736 5.835113 TCTCGACTGATGACATCAACATA 57.165 39.130 18.49 5.11 39.11 2.29
1902 2737 5.582550 TCTCGACTGATGACATCAACATAC 58.417 41.667 18.49 7.87 39.11 2.39
1903 2738 4.351192 TCGACTGATGACATCAACATACG 58.649 43.478 18.49 16.99 39.11 3.06
1904 2739 4.105486 CGACTGATGACATCAACATACGT 58.895 43.478 18.49 11.71 39.11 3.57
1905 2740 5.065474 TCGACTGATGACATCAACATACGTA 59.935 40.000 18.49 0.00 39.11 3.57
1906 2741 5.915196 CGACTGATGACATCAACATACGTAT 59.085 40.000 18.49 1.14 39.11 3.06
1907 2742 7.041644 TCGACTGATGACATCAACATACGTATA 60.042 37.037 18.49 0.00 39.11 1.47
1908 2743 7.750903 CGACTGATGACATCAACATACGTATAT 59.249 37.037 18.49 0.00 39.11 0.86
1909 2744 8.748380 ACTGATGACATCAACATACGTATATG 57.252 34.615 18.49 10.72 39.11 1.78
1910 2745 8.576442 ACTGATGACATCAACATACGTATATGA 58.424 33.333 18.49 19.59 38.67 2.15
1911 2746 8.742554 TGATGACATCAACATACGTATATGAC 57.257 34.615 15.83 14.69 37.37 3.06
1912 2747 8.356657 TGATGACATCAACATACGTATATGACA 58.643 33.333 15.83 18.47 37.37 3.58
1913 2748 9.358872 GATGACATCAACATACGTATATGACAT 57.641 33.333 22.45 22.45 40.75 3.06
1914 2749 8.742554 TGACATCAACATACGTATATGACATC 57.257 34.615 19.66 18.76 40.75 3.06
1915 2750 8.356657 TGACATCAACATACGTATATGACATCA 58.643 33.333 19.66 20.30 40.75 3.07
1916 2751 8.748380 ACATCAACATACGTATATGACATCAG 57.252 34.615 19.66 12.43 40.75 2.90
1917 2752 7.329471 ACATCAACATACGTATATGACATCAGC 59.671 37.037 19.66 0.00 40.75 4.26
1918 2753 6.744112 TCAACATACGTATATGACATCAGCA 58.256 36.000 7.96 0.00 40.75 4.41
1919 2754 7.378181 TCAACATACGTATATGACATCAGCAT 58.622 34.615 7.96 0.00 40.75 3.79
1920 2755 7.542130 TCAACATACGTATATGACATCAGCATC 59.458 37.037 7.96 0.00 40.75 3.91
1921 2756 7.163001 ACATACGTATATGACATCAGCATCT 57.837 36.000 7.96 0.00 40.75 2.90
1922 2757 7.031975 ACATACGTATATGACATCAGCATCTG 58.968 38.462 7.96 0.00 40.75 2.90
1923 2758 5.459536 ACGTATATGACATCAGCATCTGT 57.540 39.130 0.00 0.00 32.61 3.41
1924 2759 6.575162 ACGTATATGACATCAGCATCTGTA 57.425 37.500 0.00 0.00 32.61 2.74
1925 2760 6.382608 ACGTATATGACATCAGCATCTGTAC 58.617 40.000 0.00 0.00 32.61 2.90
1926 2761 6.016276 ACGTATATGACATCAGCATCTGTACA 60.016 38.462 0.00 0.00 32.61 2.90
1927 2762 6.863126 CGTATATGACATCAGCATCTGTACAA 59.137 38.462 0.00 0.00 32.61 2.41
1928 2763 7.382218 CGTATATGACATCAGCATCTGTACAAA 59.618 37.037 0.00 0.00 32.61 2.83
1929 2764 5.808042 ATGACATCAGCATCTGTACAAAC 57.192 39.130 0.00 0.00 32.61 2.93
1930 2765 4.002982 TGACATCAGCATCTGTACAAACC 58.997 43.478 0.00 0.00 32.61 3.27
1931 2766 4.002982 GACATCAGCATCTGTACAAACCA 58.997 43.478 0.00 0.00 32.61 3.67
1932 2767 4.005650 ACATCAGCATCTGTACAAACCAG 58.994 43.478 0.00 0.00 32.61 4.00
1933 2768 3.057969 TCAGCATCTGTACAAACCAGG 57.942 47.619 0.00 0.00 32.61 4.45
1934 2769 1.470098 CAGCATCTGTACAAACCAGGC 59.530 52.381 0.00 0.00 0.00 4.85
1935 2770 0.811281 GCATCTGTACAAACCAGGCC 59.189 55.000 0.00 0.00 0.00 5.19
1936 2771 1.614317 GCATCTGTACAAACCAGGCCT 60.614 52.381 0.00 0.00 0.00 5.19
1937 2772 2.086869 CATCTGTACAAACCAGGCCTG 58.913 52.381 26.87 26.87 0.00 4.85
1938 2773 0.250727 TCTGTACAAACCAGGCCTGC 60.251 55.000 28.39 12.25 0.00 4.85
1939 2774 0.250901 CTGTACAAACCAGGCCTGCT 60.251 55.000 28.39 11.78 0.00 4.24
1940 2775 0.184933 TGTACAAACCAGGCCTGCTT 59.815 50.000 28.39 17.99 0.00 3.91
1941 2776 1.328279 GTACAAACCAGGCCTGCTTT 58.672 50.000 28.39 23.04 0.00 3.51
1942 2777 1.000274 GTACAAACCAGGCCTGCTTTG 60.000 52.381 36.13 36.13 40.27 2.77
1943 2778 0.687427 ACAAACCAGGCCTGCTTTGT 60.687 50.000 37.17 37.17 41.74 2.83
1944 2779 0.465287 CAAACCAGGCCTGCTTTGTT 59.535 50.000 32.39 25.20 33.65 2.83
1945 2780 1.134431 CAAACCAGGCCTGCTTTGTTT 60.134 47.619 32.39 28.29 33.65 2.83
1946 2781 2.080654 AACCAGGCCTGCTTTGTTTA 57.919 45.000 28.39 0.00 0.00 2.01
1947 2782 2.309136 ACCAGGCCTGCTTTGTTTAT 57.691 45.000 28.39 0.23 0.00 1.40
1948 2783 2.608623 ACCAGGCCTGCTTTGTTTATT 58.391 42.857 28.39 0.00 0.00 1.40
1949 2784 2.299867 ACCAGGCCTGCTTTGTTTATTG 59.700 45.455 28.39 11.32 0.00 1.90
1950 2785 2.562298 CCAGGCCTGCTTTGTTTATTGA 59.438 45.455 28.39 0.00 0.00 2.57
1951 2786 3.006752 CCAGGCCTGCTTTGTTTATTGAA 59.993 43.478 28.39 0.00 0.00 2.69
1952 2787 3.989817 CAGGCCTGCTTTGTTTATTGAAC 59.010 43.478 22.33 0.00 38.78 3.18
1953 2788 3.897505 AGGCCTGCTTTGTTTATTGAACT 59.102 39.130 3.11 0.00 39.08 3.01
1954 2789 3.989817 GGCCTGCTTTGTTTATTGAACTG 59.010 43.478 0.00 0.00 39.08 3.16
1955 2790 4.501400 GGCCTGCTTTGTTTATTGAACTGT 60.501 41.667 0.00 0.00 39.08 3.55
1956 2791 5.049828 GCCTGCTTTGTTTATTGAACTGTT 58.950 37.500 0.00 0.00 39.08 3.16
1957 2792 5.523552 GCCTGCTTTGTTTATTGAACTGTTT 59.476 36.000 0.00 0.00 39.08 2.83
1958 2793 6.509997 GCCTGCTTTGTTTATTGAACTGTTTG 60.510 38.462 0.00 0.00 39.08 2.93
1959 2794 6.343226 TGCTTTGTTTATTGAACTGTTTGC 57.657 33.333 0.00 0.00 39.08 3.68
1960 2795 5.871524 TGCTTTGTTTATTGAACTGTTTGCA 59.128 32.000 0.00 0.00 39.08 4.08
1961 2796 6.538021 TGCTTTGTTTATTGAACTGTTTGCAT 59.462 30.769 0.00 0.00 39.08 3.96
1962 2797 6.847289 GCTTTGTTTATTGAACTGTTTGCATG 59.153 34.615 0.00 0.00 39.08 4.06
1963 2798 7.465781 GCTTTGTTTATTGAACTGTTTGCATGT 60.466 33.333 0.00 0.00 39.08 3.21
1964 2799 7.840342 TTGTTTATTGAACTGTTTGCATGTT 57.160 28.000 0.00 0.00 39.08 2.71
1965 2800 7.840342 TGTTTATTGAACTGTTTGCATGTTT 57.160 28.000 0.00 0.00 39.08 2.83
1966 2801 7.682824 TGTTTATTGAACTGTTTGCATGTTTG 58.317 30.769 0.00 0.00 39.08 2.93
1967 2802 7.332926 TGTTTATTGAACTGTTTGCATGTTTGT 59.667 29.630 0.00 0.00 39.08 2.83
1968 2803 5.721876 ATTGAACTGTTTGCATGTTTGTG 57.278 34.783 0.00 0.00 0.00 3.33
1969 2804 2.928757 TGAACTGTTTGCATGTTTGTGC 59.071 40.909 0.00 0.00 45.25 4.57
1970 2805 2.965572 ACTGTTTGCATGTTTGTGCT 57.034 40.000 0.00 0.00 45.27 4.40
1971 2806 2.542597 ACTGTTTGCATGTTTGTGCTG 58.457 42.857 0.00 0.00 45.27 4.41
1972 2807 1.259507 CTGTTTGCATGTTTGTGCTGC 59.740 47.619 0.00 0.00 45.27 5.25
1973 2808 1.134759 TGTTTGCATGTTTGTGCTGCT 60.135 42.857 0.00 0.00 45.27 4.24
1974 2809 2.100418 TGTTTGCATGTTTGTGCTGCTA 59.900 40.909 0.00 0.00 45.27 3.49
1975 2810 3.122297 GTTTGCATGTTTGTGCTGCTAA 58.878 40.909 0.00 0.00 45.27 3.09
1976 2811 2.710220 TGCATGTTTGTGCTGCTAAG 57.290 45.000 0.00 0.00 45.27 2.18
1977 2812 1.270274 TGCATGTTTGTGCTGCTAAGG 59.730 47.619 0.00 0.00 45.27 2.69
1978 2813 1.403249 GCATGTTTGTGCTGCTAAGGG 60.403 52.381 0.00 0.00 41.82 3.95
1979 2814 0.890683 ATGTTTGTGCTGCTAAGGGC 59.109 50.000 0.00 0.00 42.22 5.19
1980 2815 0.178992 TGTTTGTGCTGCTAAGGGCT 60.179 50.000 0.00 0.00 42.39 5.19
1981 2816 0.242017 GTTTGTGCTGCTAAGGGCTG 59.758 55.000 0.00 0.00 42.39 4.85
1982 2817 0.895100 TTTGTGCTGCTAAGGGCTGG 60.895 55.000 0.00 0.00 42.39 4.85
1983 2818 3.136791 GTGCTGCTAAGGGCTGGC 61.137 66.667 0.00 0.00 42.39 4.85
1984 2819 3.333219 TGCTGCTAAGGGCTGGCT 61.333 61.111 0.00 0.00 42.39 4.75
1985 2820 2.044551 GCTGCTAAGGGCTGGCTT 60.045 61.111 0.00 0.00 42.39 4.35
1986 2821 1.680314 GCTGCTAAGGGCTGGCTTT 60.680 57.895 3.69 3.69 42.39 3.51
1987 2822 1.941999 GCTGCTAAGGGCTGGCTTTG 61.942 60.000 8.86 0.76 42.39 2.77
1988 2823 0.610232 CTGCTAAGGGCTGGCTTTGT 60.610 55.000 8.86 0.00 42.39 2.83
1989 2824 0.695924 TGCTAAGGGCTGGCTTTGTA 59.304 50.000 8.86 0.00 42.39 2.41
1990 2825 1.095600 GCTAAGGGCTGGCTTTGTAC 58.904 55.000 8.86 0.00 38.06 2.90
1991 2826 1.340114 GCTAAGGGCTGGCTTTGTACT 60.340 52.381 8.86 0.00 38.06 2.73
1992 2827 2.880167 GCTAAGGGCTGGCTTTGTACTT 60.880 50.000 8.86 1.53 38.06 2.24
1993 2828 1.911057 AAGGGCTGGCTTTGTACTTC 58.089 50.000 0.00 0.00 0.00 3.01
1994 2829 1.068121 AGGGCTGGCTTTGTACTTCT 58.932 50.000 0.00 0.00 0.00 2.85
1995 2830 2.266279 AGGGCTGGCTTTGTACTTCTA 58.734 47.619 0.00 0.00 0.00 2.10
1996 2831 2.027100 AGGGCTGGCTTTGTACTTCTAC 60.027 50.000 0.00 0.00 0.00 2.59
1997 2832 2.027100 GGGCTGGCTTTGTACTTCTACT 60.027 50.000 0.00 0.00 0.00 2.57
1998 2833 3.003480 GGCTGGCTTTGTACTTCTACTG 58.997 50.000 0.00 0.00 0.00 2.74
1999 2834 3.003480 GCTGGCTTTGTACTTCTACTGG 58.997 50.000 0.00 0.00 0.00 4.00
2000 2835 3.600388 CTGGCTTTGTACTTCTACTGGG 58.400 50.000 0.00 0.00 0.00 4.45
2001 2836 2.290071 TGGCTTTGTACTTCTACTGGGC 60.290 50.000 0.00 0.00 0.00 5.36
2002 2837 2.027100 GGCTTTGTACTTCTACTGGGCT 60.027 50.000 0.00 0.00 0.00 5.19
2003 2838 3.559384 GGCTTTGTACTTCTACTGGGCTT 60.559 47.826 0.00 0.00 0.00 4.35
2004 2839 4.072839 GCTTTGTACTTCTACTGGGCTTT 58.927 43.478 0.00 0.00 0.00 3.51
2005 2840 4.519350 GCTTTGTACTTCTACTGGGCTTTT 59.481 41.667 0.00 0.00 0.00 2.27
2006 2841 5.704053 GCTTTGTACTTCTACTGGGCTTTTA 59.296 40.000 0.00 0.00 0.00 1.52
2007 2842 6.374613 GCTTTGTACTTCTACTGGGCTTTTAT 59.625 38.462 0.00 0.00 0.00 1.40
2008 2843 7.414208 GCTTTGTACTTCTACTGGGCTTTTATC 60.414 40.741 0.00 0.00 0.00 1.75
2009 2844 6.869206 TGTACTTCTACTGGGCTTTTATCT 57.131 37.500 0.00 0.00 0.00 1.98
2010 2845 6.875076 TGTACTTCTACTGGGCTTTTATCTC 58.125 40.000 0.00 0.00 0.00 2.75
2011 2846 6.439375 TGTACTTCTACTGGGCTTTTATCTCA 59.561 38.462 0.00 0.00 0.00 3.27
2012 2847 6.567602 ACTTCTACTGGGCTTTTATCTCAT 57.432 37.500 0.00 0.00 0.00 2.90
2013 2848 6.587273 ACTTCTACTGGGCTTTTATCTCATC 58.413 40.000 0.00 0.00 0.00 2.92
2014 2849 6.385467 ACTTCTACTGGGCTTTTATCTCATCT 59.615 38.462 0.00 0.00 0.00 2.90
2015 2850 6.814954 TCTACTGGGCTTTTATCTCATCTT 57.185 37.500 0.00 0.00 0.00 2.40
2016 2851 7.200434 TCTACTGGGCTTTTATCTCATCTTT 57.800 36.000 0.00 0.00 0.00 2.52
2017 2852 7.633789 TCTACTGGGCTTTTATCTCATCTTTT 58.366 34.615 0.00 0.00 0.00 2.27
2018 2853 6.765915 ACTGGGCTTTTATCTCATCTTTTC 57.234 37.500 0.00 0.00 0.00 2.29
2019 2854 5.654209 ACTGGGCTTTTATCTCATCTTTTCC 59.346 40.000 0.00 0.00 0.00 3.13
2020 2855 4.956075 TGGGCTTTTATCTCATCTTTTCCC 59.044 41.667 0.00 0.00 0.00 3.97
2021 2856 4.342378 GGGCTTTTATCTCATCTTTTCCCC 59.658 45.833 0.00 0.00 0.00 4.81
2022 2857 4.956075 GGCTTTTATCTCATCTTTTCCCCA 59.044 41.667 0.00 0.00 0.00 4.96
2023 2858 5.068329 GGCTTTTATCTCATCTTTTCCCCAG 59.932 44.000 0.00 0.00 0.00 4.45
2024 2859 5.654209 GCTTTTATCTCATCTTTTCCCCAGT 59.346 40.000 0.00 0.00 0.00 4.00
2025 2860 6.405176 GCTTTTATCTCATCTTTTCCCCAGTG 60.405 42.308 0.00 0.00 0.00 3.66
2026 2861 6.387192 TTTATCTCATCTTTTCCCCAGTGA 57.613 37.500 0.00 0.00 0.00 3.41
2027 2862 6.581388 TTATCTCATCTTTTCCCCAGTGAT 57.419 37.500 0.00 0.00 0.00 3.06
2028 2863 4.494091 TCTCATCTTTTCCCCAGTGATC 57.506 45.455 0.00 0.00 0.00 2.92
2029 2864 4.107072 TCTCATCTTTTCCCCAGTGATCT 58.893 43.478 0.00 0.00 0.00 2.75
2030 2865 4.080695 TCTCATCTTTTCCCCAGTGATCTG 60.081 45.833 0.00 0.00 41.01 2.90
2031 2866 3.588842 TCATCTTTTCCCCAGTGATCTGT 59.411 43.478 0.00 0.00 39.82 3.41
2032 2867 4.043310 TCATCTTTTCCCCAGTGATCTGTT 59.957 41.667 0.00 0.00 39.82 3.16
2033 2868 3.754965 TCTTTTCCCCAGTGATCTGTTG 58.245 45.455 0.00 0.00 39.82 3.33
2034 2869 1.909700 TTTCCCCAGTGATCTGTTGC 58.090 50.000 0.00 0.00 39.82 4.17
2035 2870 1.067295 TTCCCCAGTGATCTGTTGCT 58.933 50.000 0.00 0.00 39.82 3.91
2036 2871 1.067295 TCCCCAGTGATCTGTTGCTT 58.933 50.000 0.00 0.00 39.82 3.91
2037 2872 1.425066 TCCCCAGTGATCTGTTGCTTT 59.575 47.619 0.00 0.00 39.82 3.51
2038 2873 1.542915 CCCCAGTGATCTGTTGCTTTG 59.457 52.381 0.00 0.00 39.82 2.77
2039 2874 2.233271 CCCAGTGATCTGTTGCTTTGT 58.767 47.619 0.00 0.00 39.82 2.83
2040 2875 2.624838 CCCAGTGATCTGTTGCTTTGTT 59.375 45.455 0.00 0.00 39.82 2.83
2041 2876 3.551454 CCCAGTGATCTGTTGCTTTGTTG 60.551 47.826 0.00 0.00 39.82 3.33
2042 2877 3.047796 CAGTGATCTGTTGCTTTGTTGC 58.952 45.455 0.00 0.00 36.97 4.17
2043 2878 2.035066 AGTGATCTGTTGCTTTGTTGCC 59.965 45.455 0.00 0.00 0.00 4.52
2044 2879 2.030371 TGATCTGTTGCTTTGTTGCCA 58.970 42.857 0.00 0.00 0.00 4.92
2045 2880 2.034939 TGATCTGTTGCTTTGTTGCCAG 59.965 45.455 0.00 0.00 0.00 4.85
2046 2881 1.761449 TCTGTTGCTTTGTTGCCAGA 58.239 45.000 0.00 0.00 31.96 3.86
2047 2882 2.309613 TCTGTTGCTTTGTTGCCAGAT 58.690 42.857 0.00 0.00 30.34 2.90
2048 2883 2.694628 TCTGTTGCTTTGTTGCCAGATT 59.305 40.909 0.00 0.00 30.34 2.40
2049 2884 3.132646 TCTGTTGCTTTGTTGCCAGATTT 59.867 39.130 0.00 0.00 30.34 2.17
2050 2885 3.871485 TGTTGCTTTGTTGCCAGATTTT 58.129 36.364 0.00 0.00 0.00 1.82
2051 2886 4.260170 TGTTGCTTTGTTGCCAGATTTTT 58.740 34.783 0.00 0.00 0.00 1.94
2073 2908 4.929819 TTTCCTCTTTTTGTACTTGGGC 57.070 40.909 0.00 0.00 0.00 5.36
2074 2909 3.876309 TCCTCTTTTTGTACTTGGGCT 57.124 42.857 0.00 0.00 0.00 5.19
2075 2910 3.486383 TCCTCTTTTTGTACTTGGGCTG 58.514 45.455 0.00 0.00 0.00 4.85
2076 2911 3.117663 TCCTCTTTTTGTACTTGGGCTGT 60.118 43.478 0.00 0.00 0.00 4.40
2077 2912 4.103469 TCCTCTTTTTGTACTTGGGCTGTA 59.897 41.667 0.00 0.00 0.00 2.74
2078 2913 4.215613 CCTCTTTTTGTACTTGGGCTGTAC 59.784 45.833 0.00 8.31 40.27 2.90
2079 2914 3.810941 TCTTTTTGTACTTGGGCTGTACG 59.189 43.478 0.00 0.00 42.09 3.67
2080 2915 3.472283 TTTTGTACTTGGGCTGTACGA 57.528 42.857 0.00 6.65 42.09 3.43
2081 2916 2.443887 TTGTACTTGGGCTGTACGAC 57.556 50.000 0.00 0.00 42.09 4.34
2082 2917 1.624336 TGTACTTGGGCTGTACGACT 58.376 50.000 0.00 0.00 42.09 4.18
2083 2918 1.271379 TGTACTTGGGCTGTACGACTG 59.729 52.381 0.00 0.00 42.09 3.51
2084 2919 0.245539 TACTTGGGCTGTACGACTGC 59.754 55.000 0.00 0.00 41.55 4.40
2085 2920 1.005037 CTTGGGCTGTACGACTGCA 60.005 57.895 14.94 0.00 43.66 4.41
2086 2921 0.602638 CTTGGGCTGTACGACTGCAA 60.603 55.000 14.94 5.12 43.66 4.08
2087 2922 0.179043 TTGGGCTGTACGACTGCAAA 60.179 50.000 14.94 8.55 43.66 3.68
2088 2923 0.036164 TGGGCTGTACGACTGCAAAT 59.964 50.000 14.94 0.00 43.66 2.32
2089 2924 1.276705 TGGGCTGTACGACTGCAAATA 59.723 47.619 14.94 1.19 43.66 1.40
2090 2925 2.093181 TGGGCTGTACGACTGCAAATAT 60.093 45.455 14.94 0.00 43.66 1.28
2091 2926 3.133183 TGGGCTGTACGACTGCAAATATA 59.867 43.478 14.94 0.00 43.66 0.86
2092 2927 4.124238 GGGCTGTACGACTGCAAATATAA 58.876 43.478 14.94 0.00 43.66 0.98
2093 2928 4.755123 GGGCTGTACGACTGCAAATATAAT 59.245 41.667 14.94 0.00 43.66 1.28
2094 2929 5.929992 GGGCTGTACGACTGCAAATATAATA 59.070 40.000 14.94 0.00 43.66 0.98
2095 2930 6.128634 GGGCTGTACGACTGCAAATATAATAC 60.129 42.308 14.94 0.00 43.66 1.89
2096 2931 6.645415 GGCTGTACGACTGCAAATATAATACT 59.355 38.462 14.94 0.00 43.66 2.12
2097 2932 7.148787 GGCTGTACGACTGCAAATATAATACTC 60.149 40.741 14.94 0.00 43.66 2.59
2098 2933 7.148787 GCTGTACGACTGCAAATATAATACTCC 60.149 40.741 10.40 0.00 41.83 3.85
2099 2934 7.149973 TGTACGACTGCAAATATAATACTCCC 58.850 38.462 0.00 0.00 0.00 4.30
2100 2935 6.420913 ACGACTGCAAATATAATACTCCCT 57.579 37.500 0.00 0.00 0.00 4.20
2101 2936 6.456501 ACGACTGCAAATATAATACTCCCTC 58.543 40.000 0.00 0.00 0.00 4.30
2102 2937 5.869888 CGACTGCAAATATAATACTCCCTCC 59.130 44.000 0.00 0.00 0.00 4.30
2103 2938 5.794894 ACTGCAAATATAATACTCCCTCCG 58.205 41.667 0.00 0.00 0.00 4.63
2104 2939 5.307196 ACTGCAAATATAATACTCCCTCCGT 59.693 40.000 0.00 0.00 0.00 4.69
2105 2940 5.790593 TGCAAATATAATACTCCCTCCGTC 58.209 41.667 0.00 0.00 0.00 4.79
2106 2941 5.176592 GCAAATATAATACTCCCTCCGTCC 58.823 45.833 0.00 0.00 0.00 4.79
2107 2942 5.408356 CAAATATAATACTCCCTCCGTCCG 58.592 45.833 0.00 0.00 0.00 4.79
2108 2943 2.965671 ATAATACTCCCTCCGTCCGA 57.034 50.000 0.00 0.00 0.00 4.55
2109 2944 2.734755 TAATACTCCCTCCGTCCGAA 57.265 50.000 0.00 0.00 0.00 4.30
2110 2945 1.856629 AATACTCCCTCCGTCCGAAA 58.143 50.000 0.00 0.00 0.00 3.46
2111 2946 1.856629 ATACTCCCTCCGTCCGAAAA 58.143 50.000 0.00 0.00 0.00 2.29
2112 2947 1.856629 TACTCCCTCCGTCCGAAAAT 58.143 50.000 0.00 0.00 0.00 1.82
2113 2948 1.856629 ACTCCCTCCGTCCGAAAATA 58.143 50.000 0.00 0.00 0.00 1.40
2114 2949 1.479730 ACTCCCTCCGTCCGAAAATAC 59.520 52.381 0.00 0.00 0.00 1.89
2115 2950 1.755380 CTCCCTCCGTCCGAAAATACT 59.245 52.381 0.00 0.00 0.00 2.12
2116 2951 2.167900 CTCCCTCCGTCCGAAAATACTT 59.832 50.000 0.00 0.00 0.00 2.24
2117 2952 2.093869 TCCCTCCGTCCGAAAATACTTG 60.094 50.000 0.00 0.00 0.00 3.16
2118 2953 2.354403 CCCTCCGTCCGAAAATACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
2119 2954 2.928116 CCTCCGTCCGAAAATACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
2120 2955 2.597305 CTCCGTCCGAAAATACTTGTCG 59.403 50.000 0.00 0.00 34.58 4.35
2129 2964 5.022021 CGAAAATACTTGTCGGAGAAATGC 58.978 41.667 0.00 0.00 39.69 3.56
2130 2965 4.965119 AAATACTTGTCGGAGAAATGCC 57.035 40.909 0.00 0.00 39.69 4.40
2131 2966 3.914426 ATACTTGTCGGAGAAATGCCT 57.086 42.857 0.00 0.00 39.69 4.75
2132 2967 5.353394 AATACTTGTCGGAGAAATGCCTA 57.647 39.130 0.00 0.00 39.69 3.93
2133 2968 3.695830 ACTTGTCGGAGAAATGCCTAA 57.304 42.857 0.00 0.00 39.69 2.69
2134 2969 4.015872 ACTTGTCGGAGAAATGCCTAAA 57.984 40.909 0.00 0.00 39.69 1.85
2135 2970 4.394729 ACTTGTCGGAGAAATGCCTAAAA 58.605 39.130 0.00 0.00 39.69 1.52
2136 2971 4.825085 ACTTGTCGGAGAAATGCCTAAAAA 59.175 37.500 0.00 0.00 39.69 1.94
2137 2972 5.476945 ACTTGTCGGAGAAATGCCTAAAAAT 59.523 36.000 0.00 0.00 39.69 1.82
2138 2973 5.309323 TGTCGGAGAAATGCCTAAAAATG 57.691 39.130 0.00 0.00 39.69 2.32
2139 2974 5.007034 TGTCGGAGAAATGCCTAAAAATGA 58.993 37.500 0.00 0.00 39.69 2.57
2140 2975 5.475220 TGTCGGAGAAATGCCTAAAAATGAA 59.525 36.000 0.00 0.00 39.69 2.57
2141 2976 6.152661 TGTCGGAGAAATGCCTAAAAATGAAT 59.847 34.615 0.00 0.00 39.69 2.57
2142 2977 6.473455 GTCGGAGAAATGCCTAAAAATGAATG 59.527 38.462 0.00 0.00 39.69 2.67
2143 2978 6.152661 TCGGAGAAATGCCTAAAAATGAATGT 59.847 34.615 0.00 0.00 0.00 2.71
2144 2979 7.338196 TCGGAGAAATGCCTAAAAATGAATGTA 59.662 33.333 0.00 0.00 0.00 2.29
2145 2980 8.137437 CGGAGAAATGCCTAAAAATGAATGTAT 58.863 33.333 0.00 0.00 0.00 2.29
2146 2981 9.468532 GGAGAAATGCCTAAAAATGAATGTATC 57.531 33.333 0.00 0.00 0.00 2.24
2153 2988 9.905713 TGCCTAAAAATGAATGTATCTAGAACT 57.094 29.630 0.00 0.00 0.00 3.01
2183 3018 7.986085 ACATCTAGATACATTAATGGGCAAC 57.014 36.000 19.37 6.39 0.00 4.17
2184 3019 6.650807 ACATCTAGATACATTAATGGGCAACG 59.349 38.462 19.37 4.42 37.60 4.10
2185 3020 5.547465 TCTAGATACATTAATGGGCAACGG 58.453 41.667 19.37 4.68 37.60 4.44
2186 3021 3.486383 AGATACATTAATGGGCAACGGG 58.514 45.455 19.37 0.00 37.60 5.28
2187 3022 2.810870 TACATTAATGGGCAACGGGT 57.189 45.000 19.37 0.00 37.60 5.28
2188 3023 1.470051 ACATTAATGGGCAACGGGTC 58.530 50.000 19.37 0.00 37.60 4.46
2189 3024 0.380378 CATTAATGGGCAACGGGTCG 59.620 55.000 7.62 0.00 37.60 4.79
2190 3025 0.253610 ATTAATGGGCAACGGGTCGA 59.746 50.000 0.00 0.00 37.60 4.20
2191 3026 0.391927 TTAATGGGCAACGGGTCGAG 60.392 55.000 0.00 0.00 37.60 4.04
2192 3027 2.862674 TAATGGGCAACGGGTCGAGC 62.863 60.000 5.93 5.93 37.60 5.03
2194 3029 4.699522 GGGCAACGGGTCGAGCTT 62.700 66.667 15.18 0.00 33.75 3.74
2195 3030 2.668550 GGCAACGGGTCGAGCTTT 60.669 61.111 15.18 5.41 33.75 3.51
2196 3031 1.375013 GGCAACGGGTCGAGCTTTA 60.375 57.895 15.18 0.00 33.75 1.85
2197 3032 0.743345 GGCAACGGGTCGAGCTTTAT 60.743 55.000 15.18 0.00 33.75 1.40
2198 3033 1.084289 GCAACGGGTCGAGCTTTATT 58.916 50.000 15.18 1.26 0.00 1.40
2199 3034 1.062148 GCAACGGGTCGAGCTTTATTC 59.938 52.381 15.18 0.00 0.00 1.75
2200 3035 2.618053 CAACGGGTCGAGCTTTATTCT 58.382 47.619 15.18 0.00 0.00 2.40
2201 3036 3.777478 CAACGGGTCGAGCTTTATTCTA 58.223 45.455 15.18 0.00 0.00 2.10
2202 3037 3.433513 ACGGGTCGAGCTTTATTCTAC 57.566 47.619 15.18 0.00 0.00 2.59
2203 3038 2.223433 ACGGGTCGAGCTTTATTCTACG 60.223 50.000 15.18 8.45 0.00 3.51
2204 3039 2.223433 CGGGTCGAGCTTTATTCTACGT 60.223 50.000 15.18 0.00 0.00 3.57
2205 3040 3.002656 CGGGTCGAGCTTTATTCTACGTA 59.997 47.826 15.18 0.00 0.00 3.57
2206 3041 4.286101 GGGTCGAGCTTTATTCTACGTAC 58.714 47.826 15.18 0.00 0.00 3.67
2207 3042 4.036144 GGGTCGAGCTTTATTCTACGTACT 59.964 45.833 15.18 0.00 0.00 2.73
2208 3043 5.204101 GGTCGAGCTTTATTCTACGTACTC 58.796 45.833 7.51 0.00 0.00 2.59
2209 3044 4.897362 GTCGAGCTTTATTCTACGTACTCG 59.103 45.833 17.07 17.07 45.20 4.18
2210 3045 4.025396 TCGAGCTTTATTCTACGTACTCGG 60.025 45.833 20.66 8.56 44.28 4.63
2211 3046 3.962423 AGCTTTATTCTACGTACTCGGC 58.038 45.455 0.00 0.00 41.85 5.54
2212 3047 3.631227 AGCTTTATTCTACGTACTCGGCT 59.369 43.478 0.00 0.00 41.85 5.52
2213 3048 3.973767 GCTTTATTCTACGTACTCGGCTC 59.026 47.826 0.00 0.00 41.85 4.70
2214 3049 4.535116 CTTTATTCTACGTACTCGGCTCC 58.465 47.826 0.00 0.00 41.85 4.70
2215 3050 1.316651 ATTCTACGTACTCGGCTCCC 58.683 55.000 0.00 0.00 41.85 4.30
2216 3051 0.749454 TTCTACGTACTCGGCTCCCC 60.749 60.000 0.00 0.00 41.85 4.81
2217 3052 1.452651 CTACGTACTCGGCTCCCCA 60.453 63.158 0.00 0.00 41.85 4.96
2218 3053 1.445716 CTACGTACTCGGCTCCCCAG 61.446 65.000 0.00 0.00 41.85 4.45
2219 3054 2.898920 TACGTACTCGGCTCCCCAGG 62.899 65.000 0.00 0.00 41.85 4.45
2220 3055 2.363925 GTACTCGGCTCCCCAGGT 60.364 66.667 0.00 0.00 0.00 4.00
2221 3056 2.043248 TACTCGGCTCCCCAGGTC 60.043 66.667 0.00 0.00 0.00 3.85
2256 3091 4.222847 GGGAGCGAACCCTAGCCG 62.223 72.222 9.62 0.00 45.90 5.52
2363 3198 3.093172 GGCCCTTCCCTCCTCCAG 61.093 72.222 0.00 0.00 0.00 3.86
2364 3199 3.803162 GCCCTTCCCTCCTCCAGC 61.803 72.222 0.00 0.00 0.00 4.85
2365 3200 2.041928 CCCTTCCCTCCTCCAGCT 59.958 66.667 0.00 0.00 0.00 4.24
2366 3201 2.069430 CCCTTCCCTCCTCCAGCTC 61.069 68.421 0.00 0.00 0.00 4.09
2367 3202 2.430610 CCTTCCCTCCTCCAGCTCG 61.431 68.421 0.00 0.00 0.00 5.03
2368 3203 1.380515 CTTCCCTCCTCCAGCTCGA 60.381 63.158 0.00 0.00 0.00 4.04
2369 3204 1.380515 TTCCCTCCTCCAGCTCGAG 60.381 63.158 8.45 8.45 0.00 4.04
2370 3205 3.535962 CCCTCCTCCAGCTCGAGC 61.536 72.222 30.01 30.01 42.49 5.03
2371 3206 2.757508 CCTCCTCCAGCTCGAGCA 60.758 66.667 36.87 17.54 45.16 4.26
2372 3207 2.784356 CCTCCTCCAGCTCGAGCAG 61.784 68.421 36.87 29.47 45.16 4.24
2374 3209 3.847602 CCTCCAGCTCGAGCAGGG 61.848 72.222 38.65 34.84 46.31 4.45
2375 3210 3.847602 CTCCAGCTCGAGCAGGGG 61.848 72.222 38.65 35.29 46.31 4.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
116 117 7.751768 ATAAATCTTCCAGCACCTTATTAGC 57.248 36.000 0.00 0.00 0.00 3.09
161 164 0.890996 CTCCACCACCTTTCACCTGC 60.891 60.000 0.00 0.00 0.00 4.85
162 165 0.250901 CCTCCACCACCTTTCACCTG 60.251 60.000 0.00 0.00 0.00 4.00
163 166 0.401395 TCCTCCACCACCTTTCACCT 60.401 55.000 0.00 0.00 0.00 4.00
236 242 2.385803 GAGGGCTGGTGCTAACTACTA 58.614 52.381 0.00 0.00 39.59 1.82
237 243 1.196012 GAGGGCTGGTGCTAACTACT 58.804 55.000 0.00 0.00 39.59 2.57
238 244 0.178301 GGAGGGCTGGTGCTAACTAC 59.822 60.000 0.00 0.00 39.59 2.73
239 245 0.252513 TGGAGGGCTGGTGCTAACTA 60.253 55.000 0.00 0.00 39.59 2.24
247 253 0.032813 CATTTCCATGGAGGGCTGGT 60.033 55.000 15.53 0.00 38.24 4.00
251 257 0.462789 CTTGCATTTCCATGGAGGGC 59.537 55.000 15.53 18.95 38.24 5.19
273 279 9.990360 CCCTCTCTAGAGATTTAAAATTCTACC 57.010 37.037 22.59 0.00 44.74 3.18
284 290 3.201045 GGCAAACCCCTCTCTAGAGATTT 59.799 47.826 22.59 16.37 44.74 2.17
316 322 2.866515 TGGAGGGGTTACCATTGGTAT 58.133 47.619 16.17 0.95 43.89 2.73
323 338 0.906775 GTCGATTGGAGGGGTTACCA 59.093 55.000 2.98 0.00 43.89 3.25
344 359 0.244721 GCATGCAGGGGAGTTGTTTC 59.755 55.000 14.21 0.00 0.00 2.78
372 387 1.423921 GAGGGAGTAGAGGCTAGAGCT 59.576 57.143 0.81 0.00 41.70 4.09
386 401 5.681639 ACAAATATTTAGGAACGGAGGGAG 58.318 41.667 0.00 0.00 0.00 4.30
388 403 5.681639 AGACAAATATTTAGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
389 404 7.625828 AAAGACAAATATTTAGGAACGGAGG 57.374 36.000 0.00 0.00 0.00 4.30
420 435 9.832445 ACTCCGTATGTAGTCATTTATTGAAAT 57.168 29.630 0.00 0.00 35.70 2.17
479 494 9.865321 ACGCACTACCAAATACGAATATATATT 57.135 29.630 7.72 7.72 0.00 1.28
480 495 9.865321 AACGCACTACCAAATACGAATATATAT 57.135 29.630 0.00 0.00 0.00 0.86
481 496 9.695526 AAACGCACTACCAAATACGAATATATA 57.304 29.630 0.00 0.00 0.00 0.86
482 497 8.492748 CAAACGCACTACCAAATACGAATATAT 58.507 33.333 0.00 0.00 0.00 0.86
483 498 7.705752 TCAAACGCACTACCAAATACGAATATA 59.294 33.333 0.00 0.00 0.00 0.86
484 499 6.535865 TCAAACGCACTACCAAATACGAATAT 59.464 34.615 0.00 0.00 0.00 1.28
485 500 5.868258 TCAAACGCACTACCAAATACGAATA 59.132 36.000 0.00 0.00 0.00 1.75
486 501 4.691685 TCAAACGCACTACCAAATACGAAT 59.308 37.500 0.00 0.00 0.00 3.34
487 502 4.056740 TCAAACGCACTACCAAATACGAA 58.943 39.130 0.00 0.00 0.00 3.85
488 503 3.651206 TCAAACGCACTACCAAATACGA 58.349 40.909 0.00 0.00 0.00 3.43
489 504 4.392619 TTCAAACGCACTACCAAATACG 57.607 40.909 0.00 0.00 0.00 3.06
490 505 6.608610 AGATTTCAAACGCACTACCAAATAC 58.391 36.000 0.00 0.00 0.00 1.89
491 506 6.653320 AGAGATTTCAAACGCACTACCAAATA 59.347 34.615 0.00 0.00 0.00 1.40
492 507 5.473504 AGAGATTTCAAACGCACTACCAAAT 59.526 36.000 0.00 0.00 0.00 2.32
493 508 4.819630 AGAGATTTCAAACGCACTACCAAA 59.180 37.500 0.00 0.00 0.00 3.28
494 509 4.385825 AGAGATTTCAAACGCACTACCAA 58.614 39.130 0.00 0.00 0.00 3.67
495 510 4.002906 AGAGATTTCAAACGCACTACCA 57.997 40.909 0.00 0.00 0.00 3.25
496 511 6.476243 TTTAGAGATTTCAAACGCACTACC 57.524 37.500 0.00 0.00 0.00 3.18
532 547 9.772605 TGTATATATTATTCCCTCCGTTCCTAA 57.227 33.333 0.00 0.00 0.00 2.69
533 548 9.772605 TTGTATATATTATTCCCTCCGTTCCTA 57.227 33.333 0.00 0.00 0.00 2.94
534 549 8.674925 TTGTATATATTATTCCCTCCGTTCCT 57.325 34.615 0.00 0.00 0.00 3.36
535 550 9.379791 CTTTGTATATATTATTCCCTCCGTTCC 57.620 37.037 0.00 0.00 0.00 3.62
536 551 9.939802 ACTTTGTATATATTATTCCCTCCGTTC 57.060 33.333 0.00 0.00 0.00 3.95
559 574 2.113860 ATGCACGACATGGCTTACTT 57.886 45.000 0.00 0.00 37.70 2.24
592 620 6.072175 TGCTTTGATTACACCCTATGACAAAC 60.072 38.462 0.00 0.00 0.00 2.93
618 646 4.096382 AGTGAATACGCATGGTTGAAATCC 59.904 41.667 0.00 0.00 0.00 3.01
633 689 9.614792 ATCTTACCCATTAGTTTGAGTGAATAC 57.385 33.333 0.00 0.00 0.00 1.89
740 817 1.737735 CGCATCTTGACCGAGCACA 60.738 57.895 0.00 0.00 0.00 4.57
745 822 2.362736 ACTACTACGCATCTTGACCGA 58.637 47.619 0.00 0.00 0.00 4.69
831 1569 7.013369 ACTCAAAGATGCGTAGATGTAGATGTA 59.987 37.037 0.00 0.00 0.00 2.29
832 1570 6.149129 TCAAAGATGCGTAGATGTAGATGT 57.851 37.500 0.00 0.00 0.00 3.06
833 1571 6.143598 CACTCAAAGATGCGTAGATGTAGATG 59.856 42.308 0.00 0.00 0.00 2.90
834 1572 6.039829 TCACTCAAAGATGCGTAGATGTAGAT 59.960 38.462 0.00 0.00 0.00 1.98
835 1573 5.357032 TCACTCAAAGATGCGTAGATGTAGA 59.643 40.000 0.00 0.00 0.00 2.59
836 1574 5.582550 TCACTCAAAGATGCGTAGATGTAG 58.417 41.667 0.00 0.00 0.00 2.74
854 1592 2.159043 TGCTACTTGCTAGCCATCACTC 60.159 50.000 13.29 0.00 46.76 3.51
944 1688 5.013547 AGAGCTAGCTAGACAAGAAACTCA 58.986 41.667 25.15 0.00 0.00 3.41
1023 1774 3.461773 GCGGCCAGCCTCAGAGTA 61.462 66.667 2.24 0.00 40.81 2.59
1085 1836 2.214920 GGACCAAGGGACGGACAGT 61.215 63.158 0.00 0.00 0.00 3.55
1185 1960 0.674534 GTGGTATCGCCTCTAGTGGG 59.325 60.000 12.65 6.56 38.35 4.61
1320 2122 4.612412 TCCGGTGGTGGCGTTGAC 62.612 66.667 0.00 0.00 0.00 3.18
1321 2123 4.308458 CTCCGGTGGTGGCGTTGA 62.308 66.667 0.00 0.00 0.00 3.18
1443 2248 0.811616 ATTTCTCGTCGCATGCCCTC 60.812 55.000 13.15 1.64 0.00 4.30
1445 2250 1.353103 CATTTCTCGTCGCATGCCC 59.647 57.895 13.15 1.60 0.00 5.36
1449 2254 1.725641 TGAAGCATTTCTCGTCGCAT 58.274 45.000 0.00 0.00 34.31 4.73
1466 2271 1.080501 CAGCGCCTCTTCTCGTTGA 60.081 57.895 2.29 0.00 38.83 3.18
1497 2302 0.252742 ACTCCTCGATCTTGGGGGTT 60.253 55.000 5.83 0.00 27.90 4.11
1550 2355 3.622206 GCATGACTTGTAGGATTGGGTGA 60.622 47.826 0.00 0.00 0.00 4.02
1555 2360 2.031314 CGCTGCATGACTTGTAGGATTG 59.969 50.000 0.00 0.00 38.40 2.67
1616 2421 6.073765 GCAATACTTATACTGATGTTGACGGG 60.074 42.308 0.00 0.00 0.00 5.28
1624 2429 7.441836 TGGTACCTGCAATACTTATACTGATG 58.558 38.462 14.36 0.00 0.00 3.07
1625 2430 7.290248 ACTGGTACCTGCAATACTTATACTGAT 59.710 37.037 18.02 0.00 0.00 2.90
1629 2434 5.465724 GCACTGGTACCTGCAATACTTATAC 59.534 44.000 18.65 0.00 32.06 1.47
1630 2435 5.129650 TGCACTGGTACCTGCAATACTTATA 59.870 40.000 22.72 0.55 37.94 0.98
1632 2437 3.262151 TGCACTGGTACCTGCAATACTTA 59.738 43.478 22.72 1.86 37.94 2.24
1636 2441 2.869101 TTGCACTGGTACCTGCAATA 57.131 45.000 28.49 14.57 43.21 1.90
1843 2678 6.636454 ATGAGACCTAGACAAACCCAATTA 57.364 37.500 0.00 0.00 0.00 1.40
1848 2683 3.194968 TCGAATGAGACCTAGACAAACCC 59.805 47.826 0.00 0.00 0.00 4.11
1849 2684 4.082136 ACTCGAATGAGACCTAGACAAACC 60.082 45.833 0.00 0.00 45.57 3.27
1850 2685 4.859798 CACTCGAATGAGACCTAGACAAAC 59.140 45.833 0.00 0.00 45.57 2.93
1851 2686 4.765339 TCACTCGAATGAGACCTAGACAAA 59.235 41.667 0.00 0.00 45.57 2.83
1852 2687 4.332828 TCACTCGAATGAGACCTAGACAA 58.667 43.478 0.00 0.00 45.57 3.18
1853 2688 3.951663 TCACTCGAATGAGACCTAGACA 58.048 45.455 0.00 0.00 45.57 3.41
1869 2704 3.687212 TCATCAGTCGAGAAGTCTCACTC 59.313 47.826 8.95 0.00 43.00 3.51
1870 2705 3.438781 GTCATCAGTCGAGAAGTCTCACT 59.561 47.826 8.95 7.99 43.00 3.41
1871 2706 3.189495 TGTCATCAGTCGAGAAGTCTCAC 59.811 47.826 8.95 6.09 43.00 3.51
1872 2707 3.412386 TGTCATCAGTCGAGAAGTCTCA 58.588 45.455 8.95 0.00 43.00 3.27
1873 2708 4.095632 TGATGTCATCAGTCGAGAAGTCTC 59.904 45.833 11.62 0.00 35.57 3.36
1874 2709 4.013050 TGATGTCATCAGTCGAGAAGTCT 58.987 43.478 11.62 0.00 33.59 3.24
1875 2710 4.362932 TGATGTCATCAGTCGAGAAGTC 57.637 45.455 11.62 0.00 33.59 3.01
1876 2711 4.021981 TGTTGATGTCATCAGTCGAGAAGT 60.022 41.667 14.98 0.00 40.94 3.01
1877 2712 4.488879 TGTTGATGTCATCAGTCGAGAAG 58.511 43.478 14.98 0.00 40.94 2.85
1878 2713 4.519540 TGTTGATGTCATCAGTCGAGAA 57.480 40.909 14.98 0.00 40.94 2.87
1879 2714 4.725790 ATGTTGATGTCATCAGTCGAGA 57.274 40.909 14.98 0.49 40.94 4.04
1880 2715 4.439123 CGTATGTTGATGTCATCAGTCGAG 59.561 45.833 14.98 4.28 40.94 4.04
1881 2716 4.142469 ACGTATGTTGATGTCATCAGTCGA 60.142 41.667 14.98 0.00 40.94 4.20
1882 2717 4.105486 ACGTATGTTGATGTCATCAGTCG 58.895 43.478 14.98 16.33 40.94 4.18
1883 2718 8.854312 CATATACGTATGTTGATGTCATCAGTC 58.146 37.037 18.37 12.66 33.70 3.51
1884 2719 8.576442 TCATATACGTATGTTGATGTCATCAGT 58.424 33.333 18.37 11.02 37.53 3.41
1885 2720 8.854312 GTCATATACGTATGTTGATGTCATCAG 58.146 37.037 18.37 5.89 37.53 2.90
1886 2721 8.356657 TGTCATATACGTATGTTGATGTCATCA 58.643 33.333 18.37 11.62 39.01 3.07
1887 2722 8.742554 TGTCATATACGTATGTTGATGTCATC 57.257 34.615 18.37 5.83 39.01 2.92
1888 2723 9.358872 GATGTCATATACGTATGTTGATGTCAT 57.641 33.333 18.37 19.12 39.01 3.06
1889 2724 8.356657 TGATGTCATATACGTATGTTGATGTCA 58.643 33.333 18.37 20.10 39.01 3.58
1890 2725 8.742554 TGATGTCATATACGTATGTTGATGTC 57.257 34.615 18.37 18.39 39.01 3.06
1891 2726 7.329471 GCTGATGTCATATACGTATGTTGATGT 59.671 37.037 18.37 12.24 39.01 3.06
1892 2727 7.329226 TGCTGATGTCATATACGTATGTTGATG 59.671 37.037 18.37 13.06 39.01 3.07
1893 2728 7.378181 TGCTGATGTCATATACGTATGTTGAT 58.622 34.615 18.37 7.13 39.01 2.57
1894 2729 6.744112 TGCTGATGTCATATACGTATGTTGA 58.256 36.000 18.37 16.50 39.01 3.18
1895 2730 7.543520 AGATGCTGATGTCATATACGTATGTTG 59.456 37.037 18.37 14.61 39.01 3.33
1896 2731 7.543520 CAGATGCTGATGTCATATACGTATGTT 59.456 37.037 18.37 2.75 35.44 2.71
1897 2732 7.031975 CAGATGCTGATGTCATATACGTATGT 58.968 38.462 18.37 8.79 35.44 2.29
1898 2733 7.031975 ACAGATGCTGATGTCATATACGTATG 58.968 38.462 18.37 5.10 36.26 2.39
1899 2734 7.163001 ACAGATGCTGATGTCATATACGTAT 57.837 36.000 13.54 13.54 35.18 3.06
1900 2735 6.575162 ACAGATGCTGATGTCATATACGTA 57.425 37.500 0.00 0.00 35.18 3.57
1901 2736 5.459536 ACAGATGCTGATGTCATATACGT 57.540 39.130 0.82 0.00 35.18 3.57
1902 2737 6.381801 TGTACAGATGCTGATGTCATATACG 58.618 40.000 0.82 0.00 35.18 3.06
1903 2738 8.491152 GTTTGTACAGATGCTGATGTCATATAC 58.509 37.037 0.82 0.00 35.18 1.47
1904 2739 7.657354 GGTTTGTACAGATGCTGATGTCATATA 59.343 37.037 0.82 0.00 35.18 0.86
1905 2740 6.484643 GGTTTGTACAGATGCTGATGTCATAT 59.515 38.462 0.82 0.00 35.18 1.78
1906 2741 5.817296 GGTTTGTACAGATGCTGATGTCATA 59.183 40.000 0.82 0.00 35.18 2.15
1907 2742 4.637534 GGTTTGTACAGATGCTGATGTCAT 59.362 41.667 0.82 0.00 35.18 3.06
1908 2743 4.002982 GGTTTGTACAGATGCTGATGTCA 58.997 43.478 0.82 0.00 35.18 3.58
1909 2744 4.002982 TGGTTTGTACAGATGCTGATGTC 58.997 43.478 0.82 0.00 35.18 3.06
1910 2745 4.005650 CTGGTTTGTACAGATGCTGATGT 58.994 43.478 0.82 0.00 38.20 3.06
1911 2746 3.376234 CCTGGTTTGTACAGATGCTGATG 59.624 47.826 0.82 0.00 38.20 3.07
1912 2747 3.614092 CCTGGTTTGTACAGATGCTGAT 58.386 45.455 0.82 0.00 38.20 2.90
1913 2748 2.875672 GCCTGGTTTGTACAGATGCTGA 60.876 50.000 0.82 0.00 38.20 4.26
1914 2749 1.470098 GCCTGGTTTGTACAGATGCTG 59.530 52.381 0.00 0.00 38.20 4.41
1915 2750 1.614317 GGCCTGGTTTGTACAGATGCT 60.614 52.381 0.00 0.00 38.20 3.79
1916 2751 0.811281 GGCCTGGTTTGTACAGATGC 59.189 55.000 0.00 0.00 38.20 3.91
1917 2752 2.086869 CAGGCCTGGTTTGTACAGATG 58.913 52.381 26.14 0.00 38.20 2.90
1918 2753 1.614317 GCAGGCCTGGTTTGTACAGAT 60.614 52.381 33.46 0.00 38.20 2.90
1919 2754 0.250727 GCAGGCCTGGTTTGTACAGA 60.251 55.000 33.46 0.00 38.20 3.41
1920 2755 0.250901 AGCAGGCCTGGTTTGTACAG 60.251 55.000 31.61 3.02 38.24 2.74
1921 2756 1.843421 AGCAGGCCTGGTTTGTACA 59.157 52.632 31.61 0.00 38.24 2.90
1922 2757 4.821935 AGCAGGCCTGGTTTGTAC 57.178 55.556 31.61 13.79 38.24 2.90
1928 2763 2.299867 CAATAAACAAAGCAGGCCTGGT 59.700 45.455 31.61 31.61 44.00 4.00
1929 2764 2.562298 TCAATAAACAAAGCAGGCCTGG 59.438 45.455 33.46 19.22 0.00 4.45
1930 2765 3.940209 TCAATAAACAAAGCAGGCCTG 57.060 42.857 29.34 29.34 0.00 4.85
1931 2766 3.897505 AGTTCAATAAACAAAGCAGGCCT 59.102 39.130 0.00 0.00 40.56 5.19
1932 2767 3.989817 CAGTTCAATAAACAAAGCAGGCC 59.010 43.478 0.00 0.00 40.56 5.19
1933 2768 4.620982 ACAGTTCAATAAACAAAGCAGGC 58.379 39.130 0.00 0.00 40.56 4.85
1934 2769 6.509997 GCAAACAGTTCAATAAACAAAGCAGG 60.510 38.462 0.00 0.00 40.56 4.85
1935 2770 6.035866 TGCAAACAGTTCAATAAACAAAGCAG 59.964 34.615 0.00 0.00 40.56 4.24
1936 2771 5.871524 TGCAAACAGTTCAATAAACAAAGCA 59.128 32.000 0.00 0.00 40.56 3.91
1937 2772 6.343226 TGCAAACAGTTCAATAAACAAAGC 57.657 33.333 0.00 0.00 40.56 3.51
1938 2773 7.908230 ACATGCAAACAGTTCAATAAACAAAG 58.092 30.769 0.00 0.00 40.56 2.77
1939 2774 7.840342 ACATGCAAACAGTTCAATAAACAAA 57.160 28.000 0.00 0.00 40.56 2.83
1940 2775 7.840342 AACATGCAAACAGTTCAATAAACAA 57.160 28.000 0.00 0.00 40.56 2.83
1941 2776 7.332926 ACAAACATGCAAACAGTTCAATAAACA 59.667 29.630 0.00 0.00 40.56 2.83
1942 2777 7.635587 CACAAACATGCAAACAGTTCAATAAAC 59.364 33.333 0.00 0.00 38.21 2.01
1943 2778 7.675870 GCACAAACATGCAAACAGTTCAATAAA 60.676 33.333 0.00 0.00 45.39 1.40
1944 2779 6.238049 GCACAAACATGCAAACAGTTCAATAA 60.238 34.615 0.00 0.00 45.39 1.40
1945 2780 5.233902 GCACAAACATGCAAACAGTTCAATA 59.766 36.000 0.00 0.00 45.39 1.90
1946 2781 4.034279 GCACAAACATGCAAACAGTTCAAT 59.966 37.500 0.00 0.00 45.39 2.57
1947 2782 3.370366 GCACAAACATGCAAACAGTTCAA 59.630 39.130 0.00 0.00 45.39 2.69
1948 2783 2.928757 GCACAAACATGCAAACAGTTCA 59.071 40.909 0.00 0.00 45.39 3.18
1949 2784 3.574216 GCACAAACATGCAAACAGTTC 57.426 42.857 0.00 0.00 45.39 3.01
1958 2793 1.403249 CCCTTAGCAGCACAAACATGC 60.403 52.381 0.00 0.00 46.50 4.06
1959 2794 1.403249 GCCCTTAGCAGCACAAACATG 60.403 52.381 0.00 0.00 42.97 3.21
1960 2795 0.890683 GCCCTTAGCAGCACAAACAT 59.109 50.000 0.00 0.00 42.97 2.71
1961 2796 2.340427 GCCCTTAGCAGCACAAACA 58.660 52.632 0.00 0.00 42.97 2.83
1971 2806 1.095600 GTACAAAGCCAGCCCTTAGC 58.904 55.000 0.00 0.00 44.25 3.09
1972 2807 2.789409 AGTACAAAGCCAGCCCTTAG 57.211 50.000 0.00 0.00 0.00 2.18
1973 2808 2.642807 AGAAGTACAAAGCCAGCCCTTA 59.357 45.455 0.00 0.00 0.00 2.69
1974 2809 1.425448 AGAAGTACAAAGCCAGCCCTT 59.575 47.619 0.00 0.00 0.00 3.95
1975 2810 1.068121 AGAAGTACAAAGCCAGCCCT 58.932 50.000 0.00 0.00 0.00 5.19
1976 2811 2.027100 AGTAGAAGTACAAAGCCAGCCC 60.027 50.000 0.00 0.00 0.00 5.19
1977 2812 3.003480 CAGTAGAAGTACAAAGCCAGCC 58.997 50.000 0.00 0.00 0.00 4.85
1978 2813 3.003480 CCAGTAGAAGTACAAAGCCAGC 58.997 50.000 0.00 0.00 0.00 4.85
1979 2814 3.600388 CCCAGTAGAAGTACAAAGCCAG 58.400 50.000 0.00 0.00 0.00 4.85
1980 2815 2.290071 GCCCAGTAGAAGTACAAAGCCA 60.290 50.000 0.00 0.00 0.00 4.75
1981 2816 2.027100 AGCCCAGTAGAAGTACAAAGCC 60.027 50.000 0.00 0.00 0.00 4.35
1982 2817 3.336138 AGCCCAGTAGAAGTACAAAGC 57.664 47.619 0.00 0.00 0.00 3.51
1983 2818 7.824779 AGATAAAAGCCCAGTAGAAGTACAAAG 59.175 37.037 0.00 0.00 0.00 2.77
1984 2819 7.686434 AGATAAAAGCCCAGTAGAAGTACAAA 58.314 34.615 0.00 0.00 0.00 2.83
1985 2820 7.038587 TGAGATAAAAGCCCAGTAGAAGTACAA 60.039 37.037 0.00 0.00 0.00 2.41
1986 2821 6.439375 TGAGATAAAAGCCCAGTAGAAGTACA 59.561 38.462 0.00 0.00 0.00 2.90
1987 2822 6.875076 TGAGATAAAAGCCCAGTAGAAGTAC 58.125 40.000 0.00 0.00 0.00 2.73
1988 2823 7.565398 AGATGAGATAAAAGCCCAGTAGAAGTA 59.435 37.037 0.00 0.00 0.00 2.24
1989 2824 6.385467 AGATGAGATAAAAGCCCAGTAGAAGT 59.615 38.462 0.00 0.00 0.00 3.01
1990 2825 6.825610 AGATGAGATAAAAGCCCAGTAGAAG 58.174 40.000 0.00 0.00 0.00 2.85
1991 2826 6.814954 AGATGAGATAAAAGCCCAGTAGAA 57.185 37.500 0.00 0.00 0.00 2.10
1992 2827 6.814954 AAGATGAGATAAAAGCCCAGTAGA 57.185 37.500 0.00 0.00 0.00 2.59
1993 2828 7.012799 GGAAAAGATGAGATAAAAGCCCAGTAG 59.987 40.741 0.00 0.00 0.00 2.57
1994 2829 6.828785 GGAAAAGATGAGATAAAAGCCCAGTA 59.171 38.462 0.00 0.00 0.00 2.74
1995 2830 5.654209 GGAAAAGATGAGATAAAAGCCCAGT 59.346 40.000 0.00 0.00 0.00 4.00
1996 2831 5.068329 GGGAAAAGATGAGATAAAAGCCCAG 59.932 44.000 0.00 0.00 0.00 4.45
1997 2832 4.956075 GGGAAAAGATGAGATAAAAGCCCA 59.044 41.667 0.00 0.00 0.00 5.36
1998 2833 4.342378 GGGGAAAAGATGAGATAAAAGCCC 59.658 45.833 0.00 0.00 0.00 5.19
1999 2834 4.956075 TGGGGAAAAGATGAGATAAAAGCC 59.044 41.667 0.00 0.00 0.00 4.35
2000 2835 5.654209 ACTGGGGAAAAGATGAGATAAAAGC 59.346 40.000 0.00 0.00 0.00 3.51
2001 2836 6.886459 TCACTGGGGAAAAGATGAGATAAAAG 59.114 38.462 0.00 0.00 0.00 2.27
2002 2837 6.789268 TCACTGGGGAAAAGATGAGATAAAA 58.211 36.000 0.00 0.00 0.00 1.52
2003 2838 6.387192 TCACTGGGGAAAAGATGAGATAAA 57.613 37.500 0.00 0.00 0.00 1.40
2004 2839 6.388100 AGATCACTGGGGAAAAGATGAGATAA 59.612 38.462 0.00 0.00 0.00 1.75
2005 2840 5.907662 AGATCACTGGGGAAAAGATGAGATA 59.092 40.000 0.00 0.00 0.00 1.98
2006 2841 4.725810 AGATCACTGGGGAAAAGATGAGAT 59.274 41.667 0.00 0.00 0.00 2.75
2007 2842 4.080695 CAGATCACTGGGGAAAAGATGAGA 60.081 45.833 0.00 0.00 40.14 3.27
2008 2843 4.197750 CAGATCACTGGGGAAAAGATGAG 58.802 47.826 0.00 0.00 40.14 2.90
2009 2844 4.226427 CAGATCACTGGGGAAAAGATGA 57.774 45.455 0.00 0.00 40.14 2.92
2021 2856 4.098770 GGCAACAAAGCAACAGATCACTG 61.099 47.826 0.00 0.00 42.09 3.66
2022 2857 2.035066 GGCAACAAAGCAACAGATCACT 59.965 45.455 0.00 0.00 35.83 3.41
2023 2858 2.397549 GGCAACAAAGCAACAGATCAC 58.602 47.619 0.00 0.00 35.83 3.06
2024 2859 2.798976 GGCAACAAAGCAACAGATCA 57.201 45.000 0.00 0.00 35.83 2.92
2050 2885 5.423931 AGCCCAAGTACAAAAAGAGGAAAAA 59.576 36.000 0.00 0.00 0.00 1.94
2051 2886 4.959839 AGCCCAAGTACAAAAAGAGGAAAA 59.040 37.500 0.00 0.00 0.00 2.29
2052 2887 4.340950 CAGCCCAAGTACAAAAAGAGGAAA 59.659 41.667 0.00 0.00 0.00 3.13
2053 2888 3.888930 CAGCCCAAGTACAAAAAGAGGAA 59.111 43.478 0.00 0.00 0.00 3.36
2054 2889 3.117663 ACAGCCCAAGTACAAAAAGAGGA 60.118 43.478 0.00 0.00 0.00 3.71
2055 2890 3.222603 ACAGCCCAAGTACAAAAAGAGG 58.777 45.455 0.00 0.00 0.00 3.69
2056 2891 4.084013 CGTACAGCCCAAGTACAAAAAGAG 60.084 45.833 0.00 0.00 41.40 2.85
2057 2892 3.810941 CGTACAGCCCAAGTACAAAAAGA 59.189 43.478 0.00 0.00 41.40 2.52
2058 2893 3.810941 TCGTACAGCCCAAGTACAAAAAG 59.189 43.478 0.00 0.00 41.40 2.27
2059 2894 3.560896 GTCGTACAGCCCAAGTACAAAAA 59.439 43.478 0.00 0.00 41.40 1.94
2060 2895 3.132925 GTCGTACAGCCCAAGTACAAAA 58.867 45.455 0.00 0.00 41.40 2.44
2061 2896 2.366266 AGTCGTACAGCCCAAGTACAAA 59.634 45.455 0.00 0.00 41.40 2.83
2062 2897 1.965643 AGTCGTACAGCCCAAGTACAA 59.034 47.619 0.00 0.00 41.40 2.41
2063 2898 1.271379 CAGTCGTACAGCCCAAGTACA 59.729 52.381 0.00 0.00 41.40 2.90
2064 2899 1.992170 CAGTCGTACAGCCCAAGTAC 58.008 55.000 0.00 0.00 38.71 2.73
2065 2900 0.245539 GCAGTCGTACAGCCCAAGTA 59.754 55.000 0.00 0.00 0.00 2.24
2066 2901 1.004918 GCAGTCGTACAGCCCAAGT 60.005 57.895 0.00 0.00 0.00 3.16
2067 2902 0.602638 TTGCAGTCGTACAGCCCAAG 60.603 55.000 0.00 0.00 28.67 3.61
2068 2903 0.179043 TTTGCAGTCGTACAGCCCAA 60.179 50.000 0.00 0.00 28.67 4.12
2069 2904 0.036164 ATTTGCAGTCGTACAGCCCA 59.964 50.000 0.00 0.00 28.67 5.36
2070 2905 2.018542 TATTTGCAGTCGTACAGCCC 57.981 50.000 0.00 0.00 28.67 5.19
2071 2906 5.924475 ATTATATTTGCAGTCGTACAGCC 57.076 39.130 0.00 0.00 28.67 4.85
2072 2907 7.148787 GGAGTATTATATTTGCAGTCGTACAGC 60.149 40.741 0.00 0.00 0.00 4.40
2073 2908 7.328737 GGGAGTATTATATTTGCAGTCGTACAG 59.671 40.741 0.00 0.00 0.00 2.74
2074 2909 7.014905 AGGGAGTATTATATTTGCAGTCGTACA 59.985 37.037 0.00 0.00 0.00 2.90
2075 2910 7.376615 AGGGAGTATTATATTTGCAGTCGTAC 58.623 38.462 0.00 0.00 0.00 3.67
2076 2911 7.309621 GGAGGGAGTATTATATTTGCAGTCGTA 60.310 40.741 0.00 0.00 0.00 3.43
2077 2912 6.420913 AGGGAGTATTATATTTGCAGTCGT 57.579 37.500 0.00 0.00 0.00 4.34
2078 2913 5.869888 GGAGGGAGTATTATATTTGCAGTCG 59.130 44.000 0.00 0.00 0.00 4.18
2079 2914 5.869888 CGGAGGGAGTATTATATTTGCAGTC 59.130 44.000 0.00 0.00 0.00 3.51
2080 2915 5.307196 ACGGAGGGAGTATTATATTTGCAGT 59.693 40.000 0.00 0.00 0.00 4.40
2081 2916 5.794894 ACGGAGGGAGTATTATATTTGCAG 58.205 41.667 0.00 0.00 0.00 4.41
2082 2917 5.279809 GGACGGAGGGAGTATTATATTTGCA 60.280 44.000 0.00 0.00 0.00 4.08
2083 2918 5.176592 GGACGGAGGGAGTATTATATTTGC 58.823 45.833 0.00 0.00 0.00 3.68
2084 2919 5.184479 TCGGACGGAGGGAGTATTATATTTG 59.816 44.000 0.00 0.00 0.00 2.32
2085 2920 5.327732 TCGGACGGAGGGAGTATTATATTT 58.672 41.667 0.00 0.00 0.00 1.40
2086 2921 4.927049 TCGGACGGAGGGAGTATTATATT 58.073 43.478 0.00 0.00 0.00 1.28
2087 2922 4.581309 TCGGACGGAGGGAGTATTATAT 57.419 45.455 0.00 0.00 0.00 0.86
2088 2923 4.371624 TTCGGACGGAGGGAGTATTATA 57.628 45.455 0.00 0.00 0.00 0.98
2089 2924 2.965671 TCGGACGGAGGGAGTATTAT 57.034 50.000 0.00 0.00 0.00 1.28
2090 2925 2.734755 TTCGGACGGAGGGAGTATTA 57.265 50.000 0.00 0.00 0.00 0.98
2091 2926 1.856629 TTTCGGACGGAGGGAGTATT 58.143 50.000 0.00 0.00 0.00 1.89
2092 2927 1.856629 TTTTCGGACGGAGGGAGTAT 58.143 50.000 0.00 0.00 0.00 2.12
2093 2928 1.856629 ATTTTCGGACGGAGGGAGTA 58.143 50.000 0.00 0.00 0.00 2.59
2094 2929 1.479730 GTATTTTCGGACGGAGGGAGT 59.520 52.381 0.00 0.00 0.00 3.85
2095 2930 1.755380 AGTATTTTCGGACGGAGGGAG 59.245 52.381 0.00 0.00 0.00 4.30
2096 2931 1.856629 AGTATTTTCGGACGGAGGGA 58.143 50.000 0.00 0.00 0.00 4.20
2097 2932 2.277084 CAAGTATTTTCGGACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
2098 2933 2.928116 GACAAGTATTTTCGGACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
2099 2934 2.597305 CGACAAGTATTTTCGGACGGAG 59.403 50.000 0.00 0.00 0.00 4.63
2100 2935 2.598589 CGACAAGTATTTTCGGACGGA 58.401 47.619 0.00 0.00 0.00 4.69
2106 2941 5.022021 GCATTTCTCCGACAAGTATTTTCG 58.978 41.667 0.00 0.00 0.00 3.46
2107 2942 5.123979 AGGCATTTCTCCGACAAGTATTTTC 59.876 40.000 0.00 0.00 0.00 2.29
2108 2943 5.010282 AGGCATTTCTCCGACAAGTATTTT 58.990 37.500 0.00 0.00 0.00 1.82
2109 2944 4.589908 AGGCATTTCTCCGACAAGTATTT 58.410 39.130 0.00 0.00 0.00 1.40
2110 2945 4.222124 AGGCATTTCTCCGACAAGTATT 57.778 40.909 0.00 0.00 0.00 1.89
2111 2946 3.914426 AGGCATTTCTCCGACAAGTAT 57.086 42.857 0.00 0.00 0.00 2.12
2112 2947 4.811969 TTAGGCATTTCTCCGACAAGTA 57.188 40.909 0.00 0.00 0.00 2.24
2113 2948 3.695830 TTAGGCATTTCTCCGACAAGT 57.304 42.857 0.00 0.00 0.00 3.16
2114 2949 5.371115 TTTTTAGGCATTTCTCCGACAAG 57.629 39.130 0.00 0.00 0.00 3.16
2115 2950 5.475220 TCATTTTTAGGCATTTCTCCGACAA 59.525 36.000 0.00 0.00 0.00 3.18
2116 2951 5.007034 TCATTTTTAGGCATTTCTCCGACA 58.993 37.500 0.00 0.00 0.00 4.35
2117 2952 5.560966 TCATTTTTAGGCATTTCTCCGAC 57.439 39.130 0.00 0.00 0.00 4.79
2118 2953 6.152661 ACATTCATTTTTAGGCATTTCTCCGA 59.847 34.615 0.00 0.00 0.00 4.55
2119 2954 6.332630 ACATTCATTTTTAGGCATTTCTCCG 58.667 36.000 0.00 0.00 0.00 4.63
2120 2955 9.468532 GATACATTCATTTTTAGGCATTTCTCC 57.531 33.333 0.00 0.00 0.00 3.71
2127 2962 9.905713 AGTTCTAGATACATTCATTTTTAGGCA 57.094 29.630 0.00 0.00 0.00 4.75
2157 2992 9.672673 GTTGCCCATTAATGTATCTAGATGTAT 57.327 33.333 15.79 6.61 0.00 2.29
2158 2993 7.817478 CGTTGCCCATTAATGTATCTAGATGTA 59.183 37.037 15.79 4.44 0.00 2.29
2159 2994 6.650807 CGTTGCCCATTAATGTATCTAGATGT 59.349 38.462 15.79 0.00 0.00 3.06
2160 2995 6.092670 CCGTTGCCCATTAATGTATCTAGATG 59.907 42.308 15.79 0.00 0.00 2.90
2161 2996 6.173339 CCGTTGCCCATTAATGTATCTAGAT 58.827 40.000 14.25 10.73 0.00 1.98
2162 2997 5.512404 CCCGTTGCCCATTAATGTATCTAGA 60.512 44.000 14.25 0.00 0.00 2.43
2163 2998 4.695455 CCCGTTGCCCATTAATGTATCTAG 59.305 45.833 14.25 2.22 0.00 2.43
2164 2999 4.103469 ACCCGTTGCCCATTAATGTATCTA 59.897 41.667 14.25 0.00 0.00 1.98
2165 3000 3.117663 ACCCGTTGCCCATTAATGTATCT 60.118 43.478 14.25 0.00 0.00 1.98
2166 3001 3.219281 ACCCGTTGCCCATTAATGTATC 58.781 45.455 14.25 3.75 0.00 2.24
2167 3002 3.219281 GACCCGTTGCCCATTAATGTAT 58.781 45.455 14.25 0.00 0.00 2.29
2168 3003 2.645802 GACCCGTTGCCCATTAATGTA 58.354 47.619 14.25 0.00 0.00 2.29
2169 3004 1.470051 GACCCGTTGCCCATTAATGT 58.530 50.000 14.25 0.00 0.00 2.71
2170 3005 0.380378 CGACCCGTTGCCCATTAATG 59.620 55.000 8.58 8.58 0.00 1.90
2171 3006 0.253610 TCGACCCGTTGCCCATTAAT 59.746 50.000 0.00 0.00 0.00 1.40
2172 3007 0.391927 CTCGACCCGTTGCCCATTAA 60.392 55.000 0.00 0.00 0.00 1.40
2173 3008 1.219664 CTCGACCCGTTGCCCATTA 59.780 57.895 0.00 0.00 0.00 1.90
2174 3009 2.046314 CTCGACCCGTTGCCCATT 60.046 61.111 0.00 0.00 0.00 3.16
2175 3010 4.778143 GCTCGACCCGTTGCCCAT 62.778 66.667 0.00 0.00 0.00 4.00
2177 3012 2.791501 TAAAGCTCGACCCGTTGCCC 62.792 60.000 0.00 0.00 0.00 5.36
2178 3013 0.743345 ATAAAGCTCGACCCGTTGCC 60.743 55.000 0.00 0.00 0.00 4.52
2179 3014 1.062148 GAATAAAGCTCGACCCGTTGC 59.938 52.381 0.00 0.00 0.00 4.17
2180 3015 2.618053 AGAATAAAGCTCGACCCGTTG 58.382 47.619 0.00 0.00 0.00 4.10
2181 3016 3.733077 CGTAGAATAAAGCTCGACCCGTT 60.733 47.826 0.00 0.00 0.00 4.44
2182 3017 2.223433 CGTAGAATAAAGCTCGACCCGT 60.223 50.000 0.00 0.00 0.00 5.28
2183 3018 2.223433 ACGTAGAATAAAGCTCGACCCG 60.223 50.000 0.00 0.00 0.00 5.28
2184 3019 3.433513 ACGTAGAATAAAGCTCGACCC 57.566 47.619 0.00 0.00 0.00 4.46
2185 3020 5.167218 AGTACGTAGAATAAAGCTCGACC 57.833 43.478 0.00 0.00 0.00 4.79
2186 3021 4.897362 CGAGTACGTAGAATAAAGCTCGAC 59.103 45.833 17.88 0.00 44.76 4.20
2187 3022 4.025396 CCGAGTACGTAGAATAAAGCTCGA 60.025 45.833 22.06 0.00 44.76 4.04
2188 3023 4.209870 CCGAGTACGTAGAATAAAGCTCG 58.790 47.826 16.52 16.52 42.58 5.03
2189 3024 3.973767 GCCGAGTACGTAGAATAAAGCTC 59.026 47.826 0.00 0.00 37.88 4.09
2190 3025 3.631227 AGCCGAGTACGTAGAATAAAGCT 59.369 43.478 0.00 0.00 37.88 3.74
2191 3026 3.962423 AGCCGAGTACGTAGAATAAAGC 58.038 45.455 0.00 0.00 37.88 3.51
2192 3027 4.535116 GGAGCCGAGTACGTAGAATAAAG 58.465 47.826 0.00 0.00 37.88 1.85
2193 3028 3.316308 GGGAGCCGAGTACGTAGAATAAA 59.684 47.826 0.00 0.00 37.88 1.40
2194 3029 2.880890 GGGAGCCGAGTACGTAGAATAA 59.119 50.000 0.00 0.00 37.88 1.40
2195 3030 2.498167 GGGAGCCGAGTACGTAGAATA 58.502 52.381 0.00 0.00 37.88 1.75
2196 3031 1.316651 GGGAGCCGAGTACGTAGAAT 58.683 55.000 0.00 0.00 37.88 2.40
2197 3032 0.749454 GGGGAGCCGAGTACGTAGAA 60.749 60.000 0.00 0.00 37.88 2.10
2198 3033 1.153086 GGGGAGCCGAGTACGTAGA 60.153 63.158 0.00 0.00 37.88 2.59
2199 3034 1.445716 CTGGGGAGCCGAGTACGTAG 61.446 65.000 0.00 0.00 37.88 3.51
2200 3035 1.452651 CTGGGGAGCCGAGTACGTA 60.453 63.158 0.00 0.00 37.88 3.57
2201 3036 2.754658 CTGGGGAGCCGAGTACGT 60.755 66.667 0.00 0.00 37.88 3.57
2202 3037 3.528370 CCTGGGGAGCCGAGTACG 61.528 72.222 0.00 0.00 39.43 3.67
2203 3038 2.363925 ACCTGGGGAGCCGAGTAC 60.364 66.667 0.00 0.00 0.00 2.73
2204 3039 2.043248 GACCTGGGGAGCCGAGTA 60.043 66.667 0.00 0.00 0.00 2.59
2240 3075 4.893601 GCGGCTAGGGTTCGCTCC 62.894 72.222 0.00 0.00 45.16 4.70
2346 3181 3.093172 CTGGAGGAGGGAAGGGCC 61.093 72.222 0.00 0.00 0.00 5.80
2347 3182 3.803162 GCTGGAGGAGGGAAGGGC 61.803 72.222 0.00 0.00 0.00 5.19
2348 3183 2.041928 AGCTGGAGGAGGGAAGGG 59.958 66.667 0.00 0.00 0.00 3.95
2349 3184 2.430610 CGAGCTGGAGGAGGGAAGG 61.431 68.421 0.00 0.00 0.00 3.46
2350 3185 1.380515 TCGAGCTGGAGGAGGGAAG 60.381 63.158 0.00 0.00 0.00 3.46
2351 3186 1.380515 CTCGAGCTGGAGGAGGGAA 60.381 63.158 17.37 0.00 0.00 3.97
2352 3187 2.277072 CTCGAGCTGGAGGAGGGA 59.723 66.667 17.37 0.00 0.00 4.20
2353 3188 3.535962 GCTCGAGCTGGAGGAGGG 61.536 72.222 29.88 2.87 38.21 4.30
2354 3189 2.757508 TGCTCGAGCTGGAGGAGG 60.758 66.667 35.27 3.24 42.66 4.30
2355 3190 2.806929 CTGCTCGAGCTGGAGGAG 59.193 66.667 35.27 27.76 44.35 3.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.