Multiple sequence alignment - TraesCS7B01G343300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G343300 chr7B 100.000 6527 0 0 1 6527 598473288 598479814 0.000000e+00 12054.0
1 TraesCS7B01G343300 chr7B 96.774 1829 53 4 4267 6094 644553971 644555794 0.000000e+00 3046.0
2 TraesCS7B01G343300 chr7B 92.586 1821 66 11 91 1852 644544455 644546265 0.000000e+00 2551.0
3 TraesCS7B01G343300 chr7B 93.475 1180 65 4 4271 5443 599415151 599416325 0.000000e+00 1742.0
4 TraesCS7B01G343300 chr7B 93.966 1127 46 12 2263 3374 644550158 644551277 0.000000e+00 1685.0
5 TraesCS7B01G343300 chr7B 91.948 770 30 10 3419 4164 644551282 644552043 0.000000e+00 1050.0
6 TraesCS7B01G343300 chr7B 98.715 467 6 0 6058 6524 644555790 644556256 0.000000e+00 830.0
7 TraesCS7B01G343300 chr7B 83.575 828 83 17 2907 3685 599413504 599414327 0.000000e+00 726.0
8 TraesCS7B01G343300 chr7B 86.435 575 51 8 5926 6481 599416991 599417557 7.240000e-169 604.0
9 TraesCS7B01G343300 chr7B 84.919 557 53 14 5922 6455 599393075 599393623 9.630000e-148 534.0
10 TraesCS7B01G343300 chr7B 96.117 309 9 3 5435 5741 599416617 599416924 9.770000e-138 501.0
11 TraesCS7B01G343300 chr7B 83.275 568 63 11 5922 6462 599359492 599360054 1.630000e-135 494.0
12 TraesCS7B01G343300 chr7B 85.185 486 54 13 3753 4221 599414369 599414853 3.540000e-132 483.0
13 TraesCS7B01G343300 chr7B 89.818 275 22 5 2642 2912 599413143 599413415 1.350000e-91 348.0
14 TraesCS7B01G343300 chr7B 90.500 200 17 2 2374 2571 599412945 599413144 5.020000e-66 263.0
15 TraesCS7B01G343300 chr7B 87.654 162 18 2 5597 5758 599359301 599359460 3.110000e-43 187.0
16 TraesCS7B01G343300 chr7B 95.455 88 2 2 4163 4250 644552206 644552291 8.820000e-29 139.0
17 TraesCS7B01G343300 chr7B 96.154 78 3 0 5684 5761 599416917 599416994 1.910000e-25 128.0
18 TraesCS7B01G343300 chr7B 97.778 45 1 0 6483 6527 599360036 599360080 1.950000e-10 78.7
19 TraesCS7B01G343300 chr7B 95.745 47 1 1 1 47 644544416 644544461 2.520000e-09 75.0
20 TraesCS7B01G343300 chr7A 89.073 3203 249 69 2642 5781 638708024 638711188 0.000000e+00 3882.0
21 TraesCS7B01G343300 chr7A 89.062 896 50 19 975 1852 638706621 638707486 0.000000e+00 1068.0
22 TraesCS7B01G343300 chr7A 86.727 550 32 18 5926 6462 638711191 638711712 2.040000e-159 573.0
23 TraesCS7B01G343300 chr7A 86.328 256 31 4 2319 2571 638707771 638708025 6.450000e-70 276.0
24 TraesCS7B01G343300 chr7A 82.500 200 28 4 2067 2261 638707485 638707682 1.130000e-37 169.0
25 TraesCS7B01G343300 chr7A 95.652 46 2 0 6482 6527 638711693 638711738 2.520000e-09 75.0
26 TraesCS7B01G343300 chr7D 92.157 2040 105 28 3756 5759 552964452 552966472 0.000000e+00 2830.0
27 TraesCS7B01G343300 chr7D 86.397 1507 111 36 405 1852 552961255 552962726 0.000000e+00 1561.0
28 TraesCS7B01G343300 chr7D 85.912 1157 108 24 2358 3483 552963047 552964179 0.000000e+00 1182.0
29 TraesCS7B01G343300 chr7D 92.101 595 29 4 5945 6527 552966473 552967061 0.000000e+00 822.0
30 TraesCS7B01G343300 chr7D 87.409 548 56 5 5923 6462 552987830 552988372 9.300000e-173 617.0
31 TraesCS7B01G343300 chr7D 89.446 379 20 10 5926 6304 553064250 553064608 1.660000e-125 460.0
32 TraesCS7B01G343300 chr7D 81.250 400 70 4 1 398 464127206 464126810 1.060000e-82 318.0
33 TraesCS7B01G343300 chr7D 88.938 226 17 4 1087 1312 497019851 497019634 8.340000e-69 272.0
34 TraesCS7B01G343300 chr7D 93.007 143 9 1 5315 5457 553071319 553071460 2.390000e-49 207.0
35 TraesCS7B01G343300 chr7D 94.074 135 8 0 5323 5457 552987099 552987233 8.580000e-49 206.0
36 TraesCS7B01G343300 chr7D 91.096 146 13 0 5780 5925 595092607 595092752 1.440000e-46 198.0
37 TraesCS7B01G343300 chr7D 82.587 201 30 5 2067 2263 552962725 552962924 8.700000e-39 172.0
38 TraesCS7B01G343300 chr7D 98.734 79 1 0 5638 5716 553062751 553062829 2.450000e-29 141.0
39 TraesCS7B01G343300 chr7D 97.778 45 1 0 6483 6527 552988354 552988398 1.950000e-10 78.7
40 TraesCS7B01G343300 chr7D 100.000 36 0 0 5746 5781 553064212 553064247 4.220000e-07 67.6
41 TraesCS7B01G343300 chr3A 79.745 864 118 32 1006 1852 79458359 79457536 2.040000e-159 573.0
42 TraesCS7B01G343300 chr3A 84.521 407 59 3 1 405 112923818 112923414 3.670000e-107 399.0
43 TraesCS7B01G343300 chr3A 85.955 178 25 0 1 178 698837509 698837332 2.400000e-44 191.0
44 TraesCS7B01G343300 chr3A 94.898 98 5 0 1851 1948 716107163 716107066 3.150000e-33 154.0
45 TraesCS7B01G343300 chr3A 92.857 98 7 0 1851 1948 585017933 585017836 6.820000e-30 143.0
46 TraesCS7B01G343300 chr3A 94.286 70 1 3 1949 2018 633124128 633124062 3.220000e-18 104.0
47 TraesCS7B01G343300 chr4B 84.068 590 69 15 1186 1769 98452616 98452046 4.450000e-151 545.0
48 TraesCS7B01G343300 chr4B 89.593 221 15 5 1092 1312 605509139 605509351 2.320000e-69 274.0
49 TraesCS7B01G343300 chr4B 97.297 37 0 1 1552 1588 98452195 98452160 1.970000e-05 62.1
50 TraesCS7B01G343300 chr1D 80.901 644 94 8 1044 1681 366164932 366164312 1.270000e-131 481.0
51 TraesCS7B01G343300 chr1D 87.019 208 27 0 6089 6296 89230699 89230492 1.090000e-57 235.0
52 TraesCS7B01G343300 chr3D 85.372 376 55 0 1 376 496350301 496349926 2.210000e-104 390.0
53 TraesCS7B01G343300 chr3D 83.333 408 62 6 1 405 565243964 565243560 7.990000e-99 372.0
54 TraesCS7B01G343300 chr3D 87.079 178 23 0 1 178 564278601 564278424 1.110000e-47 202.0
55 TraesCS7B01G343300 chr3D 90.909 99 8 1 1851 1948 444055006 444054908 1.480000e-26 132.0
56 TraesCS7B01G343300 chr3D 96.825 63 0 2 1949 2011 399719510 399719450 3.220000e-18 104.0
57 TraesCS7B01G343300 chr3D 96.825 63 0 2 1949 2011 602900101 602900041 3.220000e-18 104.0
58 TraesCS7B01G343300 chr5D 82.630 403 66 4 1 401 548274004 548273604 2.900000e-93 353.0
59 TraesCS7B01G343300 chr5D 87.417 151 15 3 5776 5924 440788309 440788457 3.130000e-38 171.0
60 TraesCS7B01G343300 chr5D 96.825 63 0 2 1949 2011 127774817 127774877 3.220000e-18 104.0
61 TraesCS7B01G343300 chr5D 96.825 63 0 2 1949 2011 357544216 357544276 3.220000e-18 104.0
62 TraesCS7B01G343300 chr5A 82.521 349 55 5 1178 1524 78912262 78912606 1.060000e-77 302.0
63 TraesCS7B01G343300 chr5A 95.918 98 4 0 1851 1948 492871929 492871832 6.770000e-35 159.0
64 TraesCS7B01G343300 chr5A 93.846 65 4 0 5863 5927 279563797 279563733 1.500000e-16 99.0
65 TraesCS7B01G343300 chr5A 84.146 82 13 0 113 194 378492831 378492750 5.430000e-11 80.5
66 TraesCS7B01G343300 chr2D 88.816 152 17 0 5778 5929 403503151 403503302 3.110000e-43 187.0
67 TraesCS7B01G343300 chr2D 98.413 63 0 1 1949 2011 604411896 604411957 6.920000e-20 110.0
68 TraesCS7B01G343300 chr6A 83.000 200 34 0 4785 4984 104514142 104514341 1.450000e-41 182.0
69 TraesCS7B01G343300 chr6A 86.719 128 17 0 3970 4097 104513327 104513454 6.820000e-30 143.0
70 TraesCS7B01G343300 chr1A 87.919 149 18 0 1 149 469646784 469646932 6.730000e-40 176.0
71 TraesCS7B01G343300 chr1A 94.898 98 4 1 1851 1948 94623103 94623007 1.130000e-32 152.0
72 TraesCS7B01G343300 chr2B 87.857 140 17 0 5783 5922 735376329 735376468 1.460000e-36 165.0
73 TraesCS7B01G343300 chr4A 86.486 148 20 0 5777 5924 619313968 619314115 5.240000e-36 163.0
74 TraesCS7B01G343300 chr4A 95.918 98 4 0 1851 1948 246690840 246690743 6.770000e-35 159.0
75 TraesCS7B01G343300 chrUn 95.918 98 4 0 1851 1948 189383710 189383807 6.770000e-35 159.0
76 TraesCS7B01G343300 chrUn 95.918 98 4 0 1851 1948 233535182 233535279 6.770000e-35 159.0
77 TraesCS7B01G343300 chrUn 96.825 63 0 2 1949 2011 449375284 449375344 3.220000e-18 104.0
78 TraesCS7B01G343300 chr4D 95.918 98 4 0 1851 1948 123678683 123678586 6.770000e-35 159.0
79 TraesCS7B01G343300 chr6D 87.500 128 16 0 3970 4097 86732840 86732967 1.470000e-31 148.0
80 TraesCS7B01G343300 chr6D 96.825 63 0 2 1949 2011 102375596 102375536 3.220000e-18 104.0
81 TraesCS7B01G343300 chr6B 86.719 128 17 0 3970 4097 164381376 164381503 6.820000e-30 143.0
82 TraesCS7B01G343300 chr6B 85.156 128 19 0 3970 4097 164137201 164137074 1.480000e-26 132.0
83 TraesCS7B01G343300 chr3B 94.203 69 1 3 1950 2018 669840145 669840210 1.160000e-17 102.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G343300 chr7B 598473288 598479814 6526 False 12054.000000 12054 100.000000 1 6527 1 chr7B.!!$F1 6526
1 TraesCS7B01G343300 chr7B 644544416 644556256 11840 False 1339.428571 3046 95.027000 1 6524 7 chr7B.!!$F5 6523
2 TraesCS7B01G343300 chr7B 599412945 599417557 4612 False 599.375000 1742 90.157375 2374 6481 8 chr7B.!!$F4 4107
3 TraesCS7B01G343300 chr7B 599393075 599393623 548 False 534.000000 534 84.919000 5922 6455 1 chr7B.!!$F2 533
4 TraesCS7B01G343300 chr7B 599359301 599360080 779 False 253.233333 494 89.569000 5597 6527 3 chr7B.!!$F3 930
5 TraesCS7B01G343300 chr7A 638706621 638711738 5117 False 1007.166667 3882 88.223667 975 6527 6 chr7A.!!$F1 5552
6 TraesCS7B01G343300 chr7D 552961255 552967061 5806 False 1313.400000 2830 87.830800 405 6527 5 chr7D.!!$F3 6122
7 TraesCS7B01G343300 chr7D 552987099 552988398 1299 False 300.566667 617 93.087000 5323 6527 3 chr7D.!!$F4 1204
8 TraesCS7B01G343300 chr7D 553062751 553064608 1857 False 222.866667 460 96.060000 5638 6304 3 chr7D.!!$F5 666
9 TraesCS7B01G343300 chr3A 79457536 79458359 823 True 573.000000 573 79.745000 1006 1852 1 chr3A.!!$R1 846
10 TraesCS7B01G343300 chr4B 98452046 98452616 570 True 303.550000 545 90.682500 1186 1769 2 chr4B.!!$R1 583
11 TraesCS7B01G343300 chr1D 366164312 366164932 620 True 481.000000 481 80.901000 1044 1681 1 chr1D.!!$R2 637

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
533 534 0.107897 AATTATGCACGCAGTCGGGA 60.108 50.0 0.00 0.00 42.95 5.14 F
1687 1806 0.179111 TCGCTCCAGTAGAAATGCCG 60.179 55.0 0.00 0.00 0.00 5.69 F
1909 2066 0.183492 TCAAGGGCTGAACTGCAGTT 59.817 50.0 31.57 31.57 46.62 3.16 F
2012 2169 0.196118 AGTTTCCCCCTCCCAGAGAA 59.804 55.0 0.00 0.00 0.00 2.87 F
3496 7528 0.179156 GTGCAAGCGGATCACAATGG 60.179 55.0 0.00 0.00 0.00 3.16 F
4459 10412 0.179084 GGATGCGGAATCGAACTGGA 60.179 55.0 0.00 0.00 39.00 3.86 F
4519 10472 0.537653 GAGTAACCTGCCCTGGAGTC 59.462 60.0 0.00 0.00 0.00 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1890 2047 0.183492 AACTGCAGTTCAGCCCTTGA 59.817 50.000 26.36 0.00 46.76 3.02 R
2881 6770 1.851304 TCAAAGGGGCATAAGCAAGG 58.149 50.000 0.00 0.00 44.61 3.61 R
3255 7255 2.808543 GTCACCTAGTTGGCTTGTTCAG 59.191 50.000 0.00 0.00 40.22 3.02 R
3697 7756 2.821969 ACTTGATAAGCCAGGTTGCAAG 59.178 45.455 17.72 17.72 37.75 4.01 R
4951 10905 0.541392 ACATATTCCTCAGCGGTGCA 59.459 50.000 10.38 0.00 0.00 4.57 R
5313 11267 2.895372 CCCATGTAGCGGCGGAAC 60.895 66.667 9.78 0.00 0.00 3.62 R
6014 14027 3.402628 TGTCCAACTAGCTGTTCTTCC 57.597 47.619 0.00 0.00 36.63 3.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 1.486310 CACTAGGTGGCCATAAGCTGA 59.514 52.381 9.72 0.00 43.05 4.26
41 42 1.486726 ACTAGGTGGCCATAAGCTGAC 59.513 52.381 9.72 0.00 43.05 3.51
42 43 0.837272 TAGGTGGCCATAAGCTGACC 59.163 55.000 9.72 1.84 41.66 4.02
43 44 0.916358 AGGTGGCCATAAGCTGACCT 60.916 55.000 9.72 4.80 44.67 3.85
44 45 0.749454 GGTGGCCATAAGCTGACCTG 60.749 60.000 9.72 0.00 43.05 4.00
45 46 1.077501 TGGCCATAAGCTGACCTGC 60.078 57.895 0.00 0.00 43.05 4.85
46 47 1.077501 GGCCATAAGCTGACCTGCA 60.078 57.895 0.00 0.00 43.05 4.41
64 65 3.784883 GCAGAGCGCACTATTTGATAG 57.215 47.619 11.47 0.00 41.79 2.08
65 66 2.478134 GCAGAGCGCACTATTTGATAGG 59.522 50.000 11.47 0.00 41.79 2.57
66 67 2.478134 CAGAGCGCACTATTTGATAGGC 59.522 50.000 11.47 0.81 37.18 3.93
67 68 2.366916 AGAGCGCACTATTTGATAGGCT 59.633 45.455 11.47 0.00 37.18 4.58
68 69 2.478134 GAGCGCACTATTTGATAGGCTG 59.522 50.000 11.47 0.00 37.18 4.85
69 70 1.532868 GCGCACTATTTGATAGGCTGG 59.467 52.381 0.30 0.00 37.18 4.85
70 71 2.806745 GCGCACTATTTGATAGGCTGGA 60.807 50.000 0.30 0.00 37.18 3.86
71 72 3.668447 CGCACTATTTGATAGGCTGGAT 58.332 45.455 0.00 0.00 37.18 3.41
72 73 4.820897 CGCACTATTTGATAGGCTGGATA 58.179 43.478 0.00 0.00 37.18 2.59
73 74 5.237815 CGCACTATTTGATAGGCTGGATAA 58.762 41.667 0.00 0.00 37.18 1.75
74 75 5.349817 CGCACTATTTGATAGGCTGGATAAG 59.650 44.000 0.00 0.00 37.18 1.73
75 76 5.645497 GCACTATTTGATAGGCTGGATAAGG 59.355 44.000 0.00 0.00 37.18 2.69
84 85 2.252976 GCTGGATAAGGCTTCAGAGG 57.747 55.000 16.16 2.67 0.00 3.69
85 86 1.765314 GCTGGATAAGGCTTCAGAGGA 59.235 52.381 16.16 0.00 0.00 3.71
86 87 2.171448 GCTGGATAAGGCTTCAGAGGAA 59.829 50.000 16.16 0.00 0.00 3.36
87 88 3.181446 GCTGGATAAGGCTTCAGAGGAAT 60.181 47.826 16.16 0.00 31.34 3.01
88 89 4.640364 CTGGATAAGGCTTCAGAGGAATC 58.360 47.826 1.30 0.00 31.34 2.52
89 90 3.392616 TGGATAAGGCTTCAGAGGAATCC 59.607 47.826 1.30 9.48 39.17 3.01
90 91 3.556004 GGATAAGGCTTCAGAGGAATCCG 60.556 52.174 1.30 0.00 42.76 4.18
103 104 1.298859 GAATCCGACTGCACCACCAC 61.299 60.000 0.00 0.00 0.00 4.16
107 108 3.936203 GACTGCACCACCACCGGA 61.936 66.667 9.46 0.00 0.00 5.14
127 128 3.808174 GGAAGGACCGAATGTTGTATAGC 59.192 47.826 0.00 0.00 0.00 2.97
134 135 3.741344 CCGAATGTTGTATAGCTAGTGCC 59.259 47.826 0.00 0.00 40.80 5.01
155 156 0.887247 TGCCTTGCATTAACGCATGT 59.113 45.000 0.00 0.00 42.62 3.21
171 172 0.537188 ATGTAGTTCCGCCTCCAGTG 59.463 55.000 0.00 0.00 0.00 3.66
195 196 7.434307 GTGAATCATTGCAGTGGAAGATAAATG 59.566 37.037 9.56 0.00 0.00 2.32
261 262 2.111878 AAGCAGCTGCAGAACCGT 59.888 55.556 38.24 15.14 45.16 4.83
263 264 2.665008 AAGCAGCTGCAGAACCGTCA 62.665 55.000 38.24 0.00 45.16 4.35
300 301 0.482446 ATCAACAGAAAGGGCCACCA 59.518 50.000 6.18 0.00 40.13 4.17
392 393 5.888161 CAGGGTAGACATCTTGCCTTTTAAT 59.112 40.000 0.00 0.00 0.00 1.40
439 440 7.970102 ACTGTAATTACAAACTAGTCTTGGGA 58.030 34.615 18.55 8.89 35.50 4.37
448 449 7.234355 ACAAACTAGTCTTGGGATGATTCTTT 58.766 34.615 16.79 0.00 0.00 2.52
499 500 3.566742 GTGTACAAATTTCTTCCCACCGT 59.433 43.478 0.00 0.00 0.00 4.83
533 534 0.107897 AATTATGCACGCAGTCGGGA 60.108 50.000 0.00 0.00 42.95 5.14
582 583 1.209504 GGTGAGGTCAATCCAATCCGA 59.790 52.381 0.00 0.00 39.02 4.55
601 602 1.502527 AAAGGACCCATTGCCCCGTA 61.503 55.000 0.00 0.00 0.00 4.02
654 655 2.293170 TGACACGAGTGCCAATTTTGA 58.707 42.857 2.76 0.00 0.00 2.69
672 673 9.221775 CAATTTTGATTGCGTATAAGTCCTAAC 57.778 33.333 0.00 0.00 0.00 2.34
701 702 1.138859 TGCCACGAGTGCATAATAGCT 59.861 47.619 0.00 0.00 32.85 3.32
702 703 2.364002 TGCCACGAGTGCATAATAGCTA 59.636 45.455 0.00 0.00 32.85 3.32
703 704 2.989840 GCCACGAGTGCATAATAGCTAG 59.010 50.000 0.00 0.00 34.99 3.42
819 852 3.747529 CCAAATGACCCAAATTCAGCAAC 59.252 43.478 0.00 0.00 0.00 4.17
820 853 4.503643 CCAAATGACCCAAATTCAGCAACT 60.504 41.667 0.00 0.00 0.00 3.16
1188 1295 3.528370 CAGAGGTACCCGCTCCCG 61.528 72.222 8.74 0.00 29.38 5.14
1493 1605 3.268330 TGTTGATCTCAGCTTGCATCTC 58.732 45.455 0.00 0.00 0.00 2.75
1503 1615 2.072298 GCTTGCATCTCGGTGGATATC 58.928 52.381 0.00 0.00 0.00 1.63
1524 1636 2.973224 CTGTGCGTGCAATCTGTTTTAC 59.027 45.455 0.00 0.00 0.00 2.01
1537 1649 7.387945 CAATCTGTTTTACCGTTTGTTTGTTC 58.612 34.615 0.00 0.00 0.00 3.18
1550 1662 1.040339 TTTGTTCGGCTTGGCTTGGT 61.040 50.000 0.00 0.00 0.00 3.67
1551 1663 1.733402 TTGTTCGGCTTGGCTTGGTG 61.733 55.000 0.00 0.00 0.00 4.17
1552 1664 2.193536 GTTCGGCTTGGCTTGGTGT 61.194 57.895 0.00 0.00 0.00 4.16
1663 1782 2.008329 GATCTCAGGCAAGTGCTGAAG 58.992 52.381 2.85 0.00 41.70 3.02
1682 1801 4.021456 TGAAGTTGATCGCTCCAGTAGAAA 60.021 41.667 0.00 0.00 0.00 2.52
1683 1802 4.744795 AGTTGATCGCTCCAGTAGAAAT 57.255 40.909 0.00 0.00 0.00 2.17
1684 1803 4.437239 AGTTGATCGCTCCAGTAGAAATG 58.563 43.478 0.00 0.00 0.00 2.32
1685 1804 2.826428 TGATCGCTCCAGTAGAAATGC 58.174 47.619 0.00 0.00 0.00 3.56
1686 1805 2.139118 GATCGCTCCAGTAGAAATGCC 58.861 52.381 0.00 0.00 0.00 4.40
1687 1806 0.179111 TCGCTCCAGTAGAAATGCCG 60.179 55.000 0.00 0.00 0.00 5.69
1688 1807 0.179111 CGCTCCAGTAGAAATGCCGA 60.179 55.000 0.00 0.00 0.00 5.54
1696 1815 3.002656 CAGTAGAAATGCCGAATGCGATT 59.997 43.478 0.00 0.00 45.60 3.34
1717 1836 8.774586 GCGATTAAAGATGTTCCATAACTGTAT 58.225 33.333 0.00 0.00 36.51 2.29
1769 1921 6.339587 TGGGTGTCTTTTCCATTTATGTTC 57.660 37.500 0.00 0.00 0.00 3.18
1792 1949 2.470821 ACTACCGCAAAGTCGATATGC 58.529 47.619 9.26 9.26 36.74 3.14
1835 1992 8.877864 AAATTTGATCAGGACCATAAGTAACA 57.122 30.769 0.00 0.00 0.00 2.41
1852 2009 2.346766 ACATGAACAGTTGACCTGCA 57.653 45.000 0.00 0.00 45.68 4.41
1853 2010 2.867624 ACATGAACAGTTGACCTGCAT 58.132 42.857 0.00 0.00 45.68 3.96
1854 2011 2.816087 ACATGAACAGTTGACCTGCATC 59.184 45.455 0.00 0.00 45.68 3.91
1855 2012 1.896220 TGAACAGTTGACCTGCATCC 58.104 50.000 0.00 0.00 45.68 3.51
1856 2013 1.421268 TGAACAGTTGACCTGCATCCT 59.579 47.619 0.00 0.00 45.68 3.24
1857 2014 2.637382 TGAACAGTTGACCTGCATCCTA 59.363 45.455 0.00 0.00 45.68 2.94
1858 2015 3.264193 TGAACAGTTGACCTGCATCCTAT 59.736 43.478 0.00 0.00 45.68 2.57
1859 2016 4.263462 TGAACAGTTGACCTGCATCCTATT 60.263 41.667 0.00 0.00 45.68 1.73
1860 2017 5.045942 TGAACAGTTGACCTGCATCCTATTA 60.046 40.000 0.00 0.00 45.68 0.98
1861 2018 5.636903 ACAGTTGACCTGCATCCTATTAT 57.363 39.130 0.00 0.00 45.68 1.28
1862 2019 5.615289 ACAGTTGACCTGCATCCTATTATC 58.385 41.667 0.00 0.00 45.68 1.75
1863 2020 4.999950 CAGTTGACCTGCATCCTATTATCC 59.000 45.833 0.00 0.00 33.59 2.59
1864 2021 4.910304 AGTTGACCTGCATCCTATTATCCT 59.090 41.667 0.00 0.00 0.00 3.24
1865 2022 6.014242 CAGTTGACCTGCATCCTATTATCCTA 60.014 42.308 0.00 0.00 33.59 2.94
1866 2023 6.558775 AGTTGACCTGCATCCTATTATCCTAA 59.441 38.462 0.00 0.00 0.00 2.69
1867 2024 7.072454 AGTTGACCTGCATCCTATTATCCTAAA 59.928 37.037 0.00 0.00 0.00 1.85
1868 2025 7.009179 TGACCTGCATCCTATTATCCTAAAG 57.991 40.000 0.00 0.00 0.00 1.85
1869 2026 6.013379 TGACCTGCATCCTATTATCCTAAAGG 60.013 42.308 0.00 0.00 0.00 3.11
1870 2027 5.251700 ACCTGCATCCTATTATCCTAAAGGG 59.748 44.000 0.00 0.00 35.41 3.95
1871 2028 5.251700 CCTGCATCCTATTATCCTAAAGGGT 59.748 44.000 0.00 0.00 36.25 4.34
1872 2029 6.443849 CCTGCATCCTATTATCCTAAAGGGTA 59.556 42.308 0.00 0.00 36.25 3.69
1873 2030 7.037586 CCTGCATCCTATTATCCTAAAGGGTAA 60.038 40.741 4.23 4.23 44.22 2.85
1874 2031 7.918076 TGCATCCTATTATCCTAAAGGGTAAG 58.082 38.462 7.74 0.00 43.42 2.34
1875 2032 7.516209 TGCATCCTATTATCCTAAAGGGTAAGT 59.484 37.037 7.74 0.24 43.42 2.24
1876 2033 8.383947 GCATCCTATTATCCTAAAGGGTAAGTT 58.616 37.037 7.74 0.00 43.42 2.66
1877 2034 9.726438 CATCCTATTATCCTAAAGGGTAAGTTG 57.274 37.037 7.74 1.29 43.42 3.16
1878 2035 8.865244 TCCTATTATCCTAAAGGGTAAGTTGT 57.135 34.615 7.74 0.00 43.42 3.32
1879 2036 8.711170 TCCTATTATCCTAAAGGGTAAGTTGTG 58.289 37.037 7.74 0.00 43.42 3.33
1880 2037 8.491958 CCTATTATCCTAAAGGGTAAGTTGTGT 58.508 37.037 7.74 0.00 43.42 3.72
1881 2038 9.901172 CTATTATCCTAAAGGGTAAGTTGTGTT 57.099 33.333 7.74 0.00 43.42 3.32
1882 2039 7.989416 TTATCCTAAAGGGTAAGTTGTGTTG 57.011 36.000 0.00 0.00 35.94 3.33
1883 2040 5.633655 TCCTAAAGGGTAAGTTGTGTTGA 57.366 39.130 0.00 0.00 36.25 3.18
1884 2041 6.195600 TCCTAAAGGGTAAGTTGTGTTGAT 57.804 37.500 0.00 0.00 36.25 2.57
1885 2042 6.001460 TCCTAAAGGGTAAGTTGTGTTGATG 58.999 40.000 0.00 0.00 36.25 3.07
1886 2043 5.768164 CCTAAAGGGTAAGTTGTGTTGATGT 59.232 40.000 0.00 0.00 0.00 3.06
1887 2044 5.767816 AAAGGGTAAGTTGTGTTGATGTC 57.232 39.130 0.00 0.00 0.00 3.06
1888 2045 4.431416 AGGGTAAGTTGTGTTGATGTCA 57.569 40.909 0.00 0.00 0.00 3.58
1889 2046 4.787551 AGGGTAAGTTGTGTTGATGTCAA 58.212 39.130 0.00 0.00 0.00 3.18
1890 2047 5.385198 AGGGTAAGTTGTGTTGATGTCAAT 58.615 37.500 0.00 0.00 38.24 2.57
1891 2048 5.473504 AGGGTAAGTTGTGTTGATGTCAATC 59.526 40.000 0.00 0.00 38.24 2.67
1892 2049 5.240623 GGGTAAGTTGTGTTGATGTCAATCA 59.759 40.000 0.00 0.11 41.16 2.57
1900 2057 3.438216 TTGATGTCAATCAAGGGCTGA 57.562 42.857 0.00 0.00 45.76 4.26
1901 2058 3.438216 TGATGTCAATCAAGGGCTGAA 57.562 42.857 0.00 0.00 39.92 3.02
1902 2059 3.084039 TGATGTCAATCAAGGGCTGAAC 58.916 45.455 0.00 0.00 39.92 3.18
1903 2060 2.957402 TGTCAATCAAGGGCTGAACT 57.043 45.000 0.00 0.00 37.67 3.01
1904 2061 2.507484 TGTCAATCAAGGGCTGAACTG 58.493 47.619 0.00 0.00 37.67 3.16
1905 2062 1.200948 GTCAATCAAGGGCTGAACTGC 59.799 52.381 0.00 0.00 37.67 4.40
1906 2063 1.202915 TCAATCAAGGGCTGAACTGCA 60.203 47.619 6.09 0.00 37.67 4.41
1908 2065 0.403271 ATCAAGGGCTGAACTGCAGT 59.597 50.000 15.25 15.25 46.62 4.40
1909 2066 0.183492 TCAAGGGCTGAACTGCAGTT 59.817 50.000 31.57 31.57 46.62 3.16
1910 2067 0.313043 CAAGGGCTGAACTGCAGTTG 59.687 55.000 35.67 22.76 46.62 3.16
1911 2068 1.458639 AAGGGCTGAACTGCAGTTGC 61.459 55.000 35.67 30.10 46.62 4.17
1912 2069 2.647297 GGCTGAACTGCAGTTGCC 59.353 61.111 32.90 32.90 46.62 4.52
1913 2070 2.647297 GCTGAACTGCAGTTGCCC 59.353 61.111 35.67 21.51 46.62 5.36
1914 2071 1.900498 GCTGAACTGCAGTTGCCCT 60.900 57.895 35.67 12.77 46.62 5.19
1915 2072 1.458639 GCTGAACTGCAGTTGCCCTT 61.459 55.000 35.67 11.93 46.62 3.95
1916 2073 1.035139 CTGAACTGCAGTTGCCCTTT 58.965 50.000 35.67 11.09 39.85 3.11
1917 2074 1.000938 CTGAACTGCAGTTGCCCTTTC 60.001 52.381 35.67 19.84 39.85 2.62
1918 2075 1.032014 GAACTGCAGTTGCCCTTTCA 58.968 50.000 35.67 0.00 38.56 2.69
1919 2076 1.615392 GAACTGCAGTTGCCCTTTCAT 59.385 47.619 35.67 8.58 38.56 2.57
1920 2077 1.708341 ACTGCAGTTGCCCTTTCATT 58.292 45.000 15.25 0.00 41.18 2.57
1921 2078 1.615392 ACTGCAGTTGCCCTTTCATTC 59.385 47.619 15.25 0.00 41.18 2.67
1922 2079 1.614903 CTGCAGTTGCCCTTTCATTCA 59.385 47.619 5.25 0.00 41.18 2.57
1923 2080 1.340889 TGCAGTTGCCCTTTCATTCAC 59.659 47.619 1.06 0.00 41.18 3.18
1924 2081 1.337167 GCAGTTGCCCTTTCATTCACC 60.337 52.381 0.00 0.00 34.31 4.02
1925 2082 2.242043 CAGTTGCCCTTTCATTCACCT 58.758 47.619 0.00 0.00 0.00 4.00
1926 2083 3.420893 CAGTTGCCCTTTCATTCACCTA 58.579 45.455 0.00 0.00 0.00 3.08
1927 2084 3.441572 CAGTTGCCCTTTCATTCACCTAG 59.558 47.826 0.00 0.00 0.00 3.02
1928 2085 3.330701 AGTTGCCCTTTCATTCACCTAGA 59.669 43.478 0.00 0.00 0.00 2.43
1929 2086 4.079253 GTTGCCCTTTCATTCACCTAGAA 58.921 43.478 0.00 0.00 41.28 2.10
1931 2088 4.934356 TGCCCTTTCATTCACCTAGAATT 58.066 39.130 0.00 0.00 44.48 2.17
1932 2089 5.332743 TGCCCTTTCATTCACCTAGAATTT 58.667 37.500 0.00 0.00 44.48 1.82
1933 2090 5.779771 TGCCCTTTCATTCACCTAGAATTTT 59.220 36.000 0.00 0.00 44.48 1.82
1934 2091 6.101997 GCCCTTTCATTCACCTAGAATTTTG 58.898 40.000 0.00 0.00 44.48 2.44
1935 2092 6.633856 CCCTTTCATTCACCTAGAATTTTGG 58.366 40.000 0.00 0.00 44.48 3.28
1936 2093 6.101997 CCTTTCATTCACCTAGAATTTTGGC 58.898 40.000 0.00 0.00 44.48 4.52
1937 2094 6.071165 CCTTTCATTCACCTAGAATTTTGGCT 60.071 38.462 0.00 0.00 44.48 4.75
1938 2095 6.916360 TTCATTCACCTAGAATTTTGGCTT 57.084 33.333 0.00 0.00 44.48 4.35
1939 2096 6.271488 TCATTCACCTAGAATTTTGGCTTG 57.729 37.500 0.00 0.00 44.48 4.01
1940 2097 5.185635 TCATTCACCTAGAATTTTGGCTTGG 59.814 40.000 0.00 0.00 44.48 3.61
1941 2098 4.112634 TCACCTAGAATTTTGGCTTGGT 57.887 40.909 0.00 0.00 40.13 3.67
1942 2099 4.079253 TCACCTAGAATTTTGGCTTGGTC 58.921 43.478 0.00 0.00 38.00 4.02
1943 2100 4.082125 CACCTAGAATTTTGGCTTGGTCT 58.918 43.478 0.00 0.00 38.00 3.85
1944 2101 4.524328 CACCTAGAATTTTGGCTTGGTCTT 59.476 41.667 0.00 0.00 38.00 3.01
1945 2102 5.710099 CACCTAGAATTTTGGCTTGGTCTTA 59.290 40.000 0.00 0.00 38.00 2.10
1946 2103 5.946377 ACCTAGAATTTTGGCTTGGTCTTAG 59.054 40.000 0.00 0.00 35.80 2.18
1947 2104 5.358160 CCTAGAATTTTGGCTTGGTCTTAGG 59.642 44.000 0.00 0.00 0.00 2.69
1948 2105 3.511540 AGAATTTTGGCTTGGTCTTAGGC 59.488 43.478 0.00 0.00 38.56 3.93
1949 2106 2.675658 TTTTGGCTTGGTCTTAGGCT 57.324 45.000 0.00 0.00 38.84 4.58
1950 2107 2.675658 TTTGGCTTGGTCTTAGGCTT 57.324 45.000 0.00 0.00 38.84 4.35
1951 2108 2.200373 TTGGCTTGGTCTTAGGCTTC 57.800 50.000 0.00 0.00 38.84 3.86
1952 2109 1.064003 TGGCTTGGTCTTAGGCTTCA 58.936 50.000 0.00 0.00 38.84 3.02
1953 2110 1.003580 TGGCTTGGTCTTAGGCTTCAG 59.996 52.381 0.00 0.00 38.84 3.02
1954 2111 1.279271 GGCTTGGTCTTAGGCTTCAGA 59.721 52.381 0.00 0.00 35.48 3.27
1955 2112 2.290323 GGCTTGGTCTTAGGCTTCAGAA 60.290 50.000 0.00 0.00 35.48 3.02
1956 2113 3.412386 GCTTGGTCTTAGGCTTCAGAAA 58.588 45.455 0.00 0.00 0.00 2.52
1957 2114 3.821033 GCTTGGTCTTAGGCTTCAGAAAA 59.179 43.478 0.00 0.00 0.00 2.29
1958 2115 4.278419 GCTTGGTCTTAGGCTTCAGAAAAA 59.722 41.667 0.00 0.00 0.00 1.94
1983 2140 8.549338 AAACTTAAGAGTTAACCATCTAGTGC 57.451 34.615 10.09 0.00 45.18 4.40
1984 2141 6.331061 ACTTAAGAGTTAACCATCTAGTGCG 58.669 40.000 10.09 0.00 29.87 5.34
1985 2142 6.152323 ACTTAAGAGTTAACCATCTAGTGCGA 59.848 38.462 10.09 0.00 29.87 5.10
1986 2143 5.401531 AAGAGTTAACCATCTAGTGCGAA 57.598 39.130 0.88 0.00 0.00 4.70
1987 2144 5.401531 AGAGTTAACCATCTAGTGCGAAA 57.598 39.130 0.88 0.00 0.00 3.46
1988 2145 5.411781 AGAGTTAACCATCTAGTGCGAAAG 58.588 41.667 0.88 0.00 0.00 2.62
1989 2146 5.047235 AGAGTTAACCATCTAGTGCGAAAGT 60.047 40.000 0.88 0.00 0.00 2.66
1990 2147 4.929808 AGTTAACCATCTAGTGCGAAAGTG 59.070 41.667 0.88 0.00 0.00 3.16
1991 2148 1.726853 ACCATCTAGTGCGAAAGTGC 58.273 50.000 0.00 0.00 0.00 4.40
1992 2149 1.276421 ACCATCTAGTGCGAAAGTGCT 59.724 47.619 0.00 0.00 35.36 4.40
1993 2150 2.496070 ACCATCTAGTGCGAAAGTGCTA 59.504 45.455 0.00 0.00 35.36 3.49
1994 2151 3.119291 CCATCTAGTGCGAAAGTGCTAG 58.881 50.000 0.00 0.00 38.21 3.42
1995 2152 3.429547 CCATCTAGTGCGAAAGTGCTAGT 60.430 47.826 0.00 0.00 38.12 2.57
1996 2153 3.936372 TCTAGTGCGAAAGTGCTAGTT 57.064 42.857 0.00 0.00 38.12 2.24
1997 2154 4.252971 TCTAGTGCGAAAGTGCTAGTTT 57.747 40.909 0.00 0.00 38.12 2.66
1998 2155 4.235360 TCTAGTGCGAAAGTGCTAGTTTC 58.765 43.478 0.00 0.00 38.12 2.78
1999 2156 2.143925 AGTGCGAAAGTGCTAGTTTCC 58.856 47.619 9.45 5.27 34.80 3.13
2000 2157 1.197036 GTGCGAAAGTGCTAGTTTCCC 59.803 52.381 9.45 3.84 34.80 3.97
2001 2158 0.803117 GCGAAAGTGCTAGTTTCCCC 59.197 55.000 9.45 1.30 34.80 4.81
2002 2159 1.450025 CGAAAGTGCTAGTTTCCCCC 58.550 55.000 9.45 0.00 34.80 5.40
2003 2160 1.003233 CGAAAGTGCTAGTTTCCCCCT 59.997 52.381 9.45 0.00 34.80 4.79
2004 2161 2.712709 GAAAGTGCTAGTTTCCCCCTC 58.287 52.381 0.00 0.00 32.72 4.30
2005 2162 0.992695 AAGTGCTAGTTTCCCCCTCC 59.007 55.000 0.00 0.00 0.00 4.30
2006 2163 0.914902 AGTGCTAGTTTCCCCCTCCC 60.915 60.000 0.00 0.00 0.00 4.30
2007 2164 1.162329 TGCTAGTTTCCCCCTCCCA 59.838 57.895 0.00 0.00 0.00 4.37
2008 2165 0.914417 TGCTAGTTTCCCCCTCCCAG 60.914 60.000 0.00 0.00 0.00 4.45
2009 2166 0.620700 GCTAGTTTCCCCCTCCCAGA 60.621 60.000 0.00 0.00 0.00 3.86
2010 2167 1.501582 CTAGTTTCCCCCTCCCAGAG 58.498 60.000 0.00 0.00 0.00 3.35
2011 2168 1.008449 CTAGTTTCCCCCTCCCAGAGA 59.992 57.143 0.00 0.00 0.00 3.10
2012 2169 0.196118 AGTTTCCCCCTCCCAGAGAA 59.804 55.000 0.00 0.00 0.00 2.87
2013 2170 1.203622 AGTTTCCCCCTCCCAGAGAAT 60.204 52.381 0.00 0.00 0.00 2.40
2014 2171 1.064389 GTTTCCCCCTCCCAGAGAATG 60.064 57.143 0.00 0.00 0.00 2.67
2024 2181 2.557920 CCAGAGAATGGGATAGTGGC 57.442 55.000 0.00 0.00 46.36 5.01
2025 2182 1.770658 CCAGAGAATGGGATAGTGGCA 59.229 52.381 0.00 0.00 46.36 4.92
2026 2183 2.173356 CCAGAGAATGGGATAGTGGCAA 59.827 50.000 0.00 0.00 46.36 4.52
2027 2184 3.181436 CCAGAGAATGGGATAGTGGCAAT 60.181 47.826 0.00 0.00 46.36 3.56
2028 2185 4.042062 CCAGAGAATGGGATAGTGGCAATA 59.958 45.833 0.00 0.00 46.36 1.90
2029 2186 5.456619 CCAGAGAATGGGATAGTGGCAATAA 60.457 44.000 0.00 0.00 46.36 1.40
2030 2187 6.243900 CAGAGAATGGGATAGTGGCAATAAT 58.756 40.000 0.00 0.00 0.00 1.28
2031 2188 7.397221 CAGAGAATGGGATAGTGGCAATAATA 58.603 38.462 0.00 0.00 0.00 0.98
2032 2189 7.335422 CAGAGAATGGGATAGTGGCAATAATAC 59.665 40.741 0.00 0.00 0.00 1.89
2033 2190 6.485171 AGAATGGGATAGTGGCAATAATACC 58.515 40.000 0.00 2.53 0.00 2.73
2034 2191 4.650972 TGGGATAGTGGCAATAATACCC 57.349 45.455 20.29 20.29 35.82 3.69
2035 2192 3.332485 TGGGATAGTGGCAATAATACCCC 59.668 47.826 22.49 18.47 34.54 4.95
2036 2193 3.591977 GGGATAGTGGCAATAATACCCCT 59.408 47.826 17.95 0.13 0.00 4.79
2037 2194 4.324331 GGGATAGTGGCAATAATACCCCTC 60.324 50.000 17.95 3.35 0.00 4.30
2038 2195 4.288626 GGATAGTGGCAATAATACCCCTCA 59.711 45.833 0.00 0.00 0.00 3.86
2039 2196 3.577805 AGTGGCAATAATACCCCTCAC 57.422 47.619 0.00 0.00 0.00 3.51
2040 2197 3.123273 AGTGGCAATAATACCCCTCACT 58.877 45.455 0.00 0.00 0.00 3.41
2041 2198 3.117888 AGTGGCAATAATACCCCTCACTG 60.118 47.826 0.00 0.00 33.63 3.66
2042 2199 2.174639 TGGCAATAATACCCCTCACTGG 59.825 50.000 0.00 0.00 0.00 4.00
2043 2200 2.174854 GGCAATAATACCCCTCACTGGT 59.825 50.000 0.00 0.00 39.97 4.00
2044 2201 3.477530 GCAATAATACCCCTCACTGGTC 58.522 50.000 0.00 0.00 37.31 4.02
2045 2202 3.118038 GCAATAATACCCCTCACTGGTCA 60.118 47.826 0.00 0.00 37.31 4.02
2046 2203 4.627741 GCAATAATACCCCTCACTGGTCAA 60.628 45.833 0.00 0.00 37.31 3.18
2047 2204 5.505780 CAATAATACCCCTCACTGGTCAAA 58.494 41.667 0.00 0.00 37.31 2.69
2048 2205 5.789574 ATAATACCCCTCACTGGTCAAAA 57.210 39.130 0.00 0.00 37.31 2.44
2049 2206 4.675063 AATACCCCTCACTGGTCAAAAT 57.325 40.909 0.00 0.00 37.31 1.82
2050 2207 5.789574 AATACCCCTCACTGGTCAAAATA 57.210 39.130 0.00 0.00 37.31 1.40
2051 2208 3.721087 ACCCCTCACTGGTCAAAATAG 57.279 47.619 0.00 0.00 0.00 1.73
2052 2209 3.256704 ACCCCTCACTGGTCAAAATAGA 58.743 45.455 0.00 0.00 0.00 1.98
2053 2210 3.655777 ACCCCTCACTGGTCAAAATAGAA 59.344 43.478 0.00 0.00 0.00 2.10
2054 2211 4.105697 ACCCCTCACTGGTCAAAATAGAAA 59.894 41.667 0.00 0.00 0.00 2.52
2055 2212 5.222337 ACCCCTCACTGGTCAAAATAGAAAT 60.222 40.000 0.00 0.00 0.00 2.17
2056 2213 6.011981 ACCCCTCACTGGTCAAAATAGAAATA 60.012 38.462 0.00 0.00 0.00 1.40
2057 2214 6.889722 CCCCTCACTGGTCAAAATAGAAATAA 59.110 38.462 0.00 0.00 0.00 1.40
2058 2215 7.148069 CCCCTCACTGGTCAAAATAGAAATAAC 60.148 40.741 0.00 0.00 0.00 1.89
2059 2216 7.393234 CCCTCACTGGTCAAAATAGAAATAACA 59.607 37.037 0.00 0.00 0.00 2.41
2060 2217 8.237267 CCTCACTGGTCAAAATAGAAATAACAC 58.763 37.037 0.00 0.00 0.00 3.32
2073 2230 6.380095 AGAAATAACACTAGAGGCTAGACG 57.620 41.667 8.36 2.25 0.00 4.18
2132 2293 2.171448 GGCTGGCTGGAGAGATAAAAGA 59.829 50.000 0.00 0.00 0.00 2.52
2133 2294 3.181446 GGCTGGCTGGAGAGATAAAAGAT 60.181 47.826 0.00 0.00 0.00 2.40
2141 2302 7.936301 GGCTGGAGAGATAAAAGATAATGACTT 59.064 37.037 0.00 0.00 0.00 3.01
2159 2320 6.716934 TGACTTACCTTGAGATGAGGATAC 57.283 41.667 0.00 0.00 37.72 2.24
2220 6023 7.142306 GGAACCCAGAAACAAAATACTCTAC 57.858 40.000 0.00 0.00 0.00 2.59
2221 6024 6.713450 GGAACCCAGAAACAAAATACTCTACA 59.287 38.462 0.00 0.00 0.00 2.74
2240 6047 9.274206 ACTCTACATTTCTTTCTTTAACAGGTC 57.726 33.333 0.00 0.00 0.00 3.85
2340 6202 1.110442 TGAAACTGTTTGGGTGCCTG 58.890 50.000 11.03 0.00 0.00 4.85
2366 6228 5.869344 CCTCTGTTTCTGTTCATCACGATAA 59.131 40.000 0.00 0.00 0.00 1.75
2539 6403 2.124903 GCAACGCATAGCTGTACGTAT 58.875 47.619 9.29 0.00 37.87 3.06
2554 6418 3.620427 ACGTATGTGCCCTATTCACAA 57.380 42.857 0.00 0.00 46.07 3.33
2592 6458 6.271159 TGAACCTTTTTGGGCCTTAATAACAT 59.729 34.615 4.53 0.00 41.11 2.71
2593 6459 6.294361 ACCTTTTTGGGCCTTAATAACATC 57.706 37.500 4.53 0.00 41.11 3.06
2594 6460 5.782845 ACCTTTTTGGGCCTTAATAACATCA 59.217 36.000 4.53 0.00 41.11 3.07
2595 6461 6.443527 ACCTTTTTGGGCCTTAATAACATCAT 59.556 34.615 4.53 0.00 41.11 2.45
2596 6462 6.986231 CCTTTTTGGGCCTTAATAACATCATC 59.014 38.462 4.53 0.00 0.00 2.92
2597 6463 7.364585 CCTTTTTGGGCCTTAATAACATCATCA 60.365 37.037 4.53 0.00 0.00 3.07
2598 6464 7.673641 TTTTGGGCCTTAATAACATCATCAT 57.326 32.000 4.53 0.00 0.00 2.45
2599 6465 7.673641 TTTGGGCCTTAATAACATCATCATT 57.326 32.000 4.53 0.00 0.00 2.57
2600 6466 6.899393 TGGGCCTTAATAACATCATCATTC 57.101 37.500 4.53 0.00 0.00 2.67
2601 6467 6.613699 TGGGCCTTAATAACATCATCATTCT 58.386 36.000 4.53 0.00 0.00 2.40
2602 6468 7.068702 TGGGCCTTAATAACATCATCATTCTT 58.931 34.615 4.53 0.00 0.00 2.52
2603 6469 7.231317 TGGGCCTTAATAACATCATCATTCTTC 59.769 37.037 4.53 0.00 0.00 2.87
2604 6470 7.449704 GGGCCTTAATAACATCATCATTCTTCT 59.550 37.037 0.84 0.00 0.00 2.85
2605 6471 8.854117 GGCCTTAATAACATCATCATTCTTCTT 58.146 33.333 0.00 0.00 0.00 2.52
2768 6656 5.852738 ATTCGCAGATATGTAATGCTGTC 57.147 39.130 0.00 0.00 37.81 3.51
2881 6770 5.711976 TGATTTCCTTTTGAATGGACTCCTC 59.288 40.000 0.00 0.00 32.58 3.71
2900 6789 1.357420 TCCTTGCTTATGCCCCTTTGA 59.643 47.619 0.00 0.00 38.71 2.69
2946 6932 4.884164 AGCTCCTGGCAAGTGTTTAATATC 59.116 41.667 0.00 0.00 44.79 1.63
2954 6940 6.021596 GGCAAGTGTTTAATATCTGACAACG 58.978 40.000 0.00 0.00 0.00 4.10
3147 7141 4.826733 TGCCTTCAGTTTGAAAGCTTGATA 59.173 37.500 0.00 0.00 42.62 2.15
3157 7151 9.736023 AGTTTGAAAGCTTGATACTAAAGTTTG 57.264 29.630 0.00 0.00 29.81 2.93
3255 7255 7.117956 GGGAATTACTCTTGGAGCGTATTAATC 59.882 40.741 0.00 0.00 32.04 1.75
3319 7332 7.015877 GCTCTGCACTTTACAAACTTACATAC 58.984 38.462 0.00 0.00 0.00 2.39
3386 7399 5.100259 TGTAATAACAGCGCAACTAGAGTC 58.900 41.667 11.47 0.00 0.00 3.36
3387 7400 3.868757 ATAACAGCGCAACTAGAGTCA 57.131 42.857 11.47 0.00 0.00 3.41
3407 7420 5.188555 AGTCATCTCTGCTTCAAACCTCATA 59.811 40.000 0.00 0.00 0.00 2.15
3409 7422 6.541641 GTCATCTCTGCTTCAAACCTCATAAT 59.458 38.462 0.00 0.00 0.00 1.28
3411 7424 6.748333 TCTCTGCTTCAAACCTCATAATTG 57.252 37.500 0.00 0.00 0.00 2.32
3412 7425 6.475504 TCTCTGCTTCAAACCTCATAATTGA 58.524 36.000 0.00 0.00 0.00 2.57
3447 7460 3.406764 AGTCTGCTTGTCCAATTCAGAC 58.593 45.455 21.98 21.98 43.39 3.51
3484 7497 0.250467 TGAGTTCTGAGGGTGCAAGC 60.250 55.000 0.00 0.00 0.00 4.01
3493 7506 1.971167 GGGTGCAAGCGGATCACAA 60.971 57.895 0.00 0.00 33.03 3.33
3496 7528 0.179156 GTGCAAGCGGATCACAATGG 60.179 55.000 0.00 0.00 0.00 3.16
3581 7626 1.134521 TGGTCGATACTGCAATCCCAC 60.135 52.381 0.00 0.00 0.00 4.61
3584 7629 3.270877 GTCGATACTGCAATCCCACTTT 58.729 45.455 0.00 0.00 0.00 2.66
3697 7756 6.017852 GCTGGCTGACATATAGTTCCTTTTAC 60.018 42.308 0.00 0.00 0.00 2.01
3709 7768 1.960689 TCCTTTTACTTGCAACCTGGC 59.039 47.619 0.00 0.00 0.00 4.85
3711 7770 2.365293 CCTTTTACTTGCAACCTGGCTT 59.635 45.455 0.00 0.00 34.04 4.35
3712 7771 3.572255 CCTTTTACTTGCAACCTGGCTTA 59.428 43.478 0.00 0.00 34.04 3.09
3713 7772 4.220602 CCTTTTACTTGCAACCTGGCTTAT 59.779 41.667 0.00 0.00 34.04 1.73
3714 7773 5.385509 TTTTACTTGCAACCTGGCTTATC 57.614 39.130 0.00 0.00 34.04 1.75
3715 7774 2.584835 ACTTGCAACCTGGCTTATCA 57.415 45.000 0.00 0.00 34.04 2.15
3716 7775 2.875296 ACTTGCAACCTGGCTTATCAA 58.125 42.857 0.00 0.00 34.04 2.57
3717 7776 2.821969 ACTTGCAACCTGGCTTATCAAG 59.178 45.455 0.00 3.67 36.48 3.02
3788 7874 2.159653 GCCAATTTCTGTGACTACTGCG 60.160 50.000 0.00 0.00 0.00 5.18
3809 7895 7.064016 ACTGCGTGTGAAATTTTGTTAAATGTT 59.936 29.630 0.00 0.00 34.27 2.71
3825 7915 0.976641 TGTTAGTACTGCCAGCTGCT 59.023 50.000 8.66 0.00 42.00 4.24
3908 8007 5.467902 TTTTGCTTGCTGATGTTGTTTTC 57.532 34.783 0.00 0.00 0.00 2.29
3919 8018 2.096248 TGTTGTTTTCCTTTCGTGCCT 58.904 42.857 0.00 0.00 0.00 4.75
4134 8236 7.951347 ATGAAGATGTTTTCTGGCTTTATCT 57.049 32.000 0.00 0.00 33.93 1.98
4272 10218 3.506398 CTTCACCCCACCCAGTTTATTT 58.494 45.455 0.00 0.00 0.00 1.40
4276 10222 5.656420 TCACCCCACCCAGTTTATTTATTT 58.344 37.500 0.00 0.00 0.00 1.40
4322 10275 8.911918 TTGTGACCATAGTGTAATGTAAACTT 57.088 30.769 0.00 0.00 0.00 2.66
4369 10322 2.691409 TGAAGATAAACCGGCTCAGG 57.309 50.000 0.00 0.00 37.30 3.86
4390 10343 6.040247 CAGGTGTAGAGTTAATTATCACGCA 58.960 40.000 0.00 0.00 0.00 5.24
4429 10382 3.924686 GCATTGAAGAAATGGCTGACAAG 59.075 43.478 0.00 0.00 45.05 3.16
4459 10412 0.179084 GGATGCGGAATCGAACTGGA 60.179 55.000 0.00 0.00 39.00 3.86
4488 10441 8.261522 TGTAAATCCATACATGTAAGTGTAGCA 58.738 33.333 10.14 1.29 37.93 3.49
4490 10443 4.678622 TCCATACATGTAAGTGTAGCACG 58.321 43.478 10.14 0.00 39.64 5.34
4519 10472 0.537653 GAGTAACCTGCCCTGGAGTC 59.462 60.000 0.00 0.00 0.00 3.36
4695 10648 1.466167 CCAAGACGCTTCAAGGTGATG 59.534 52.381 0.00 0.00 0.00 3.07
4703 10656 6.096423 AGACGCTTCAAGGTGATGTACTAATA 59.904 38.462 0.00 0.00 0.00 0.98
4951 10905 8.522830 CAAGTGTATGGTGGAAACAATAGAATT 58.477 33.333 0.00 0.00 46.06 2.17
5048 11002 6.866480 CAAAGTGCCTTTGTATGGACATAAT 58.134 36.000 15.52 0.00 43.85 1.28
5050 11004 4.889409 AGTGCCTTTGTATGGACATAATGG 59.111 41.667 0.00 0.00 34.86 3.16
5090 11044 7.229506 CAGAAAGGAAACTGAGACAATTACCTT 59.770 37.037 0.00 0.00 42.68 3.50
5092 11046 7.898014 AAGGAAACTGAGACAATTACCTTTT 57.102 32.000 0.00 0.00 42.68 2.27
5858 13862 3.100817 CGCAGTTCAAATTTATGGAGCG 58.899 45.455 10.58 10.58 35.42 5.03
6014 14027 6.611381 TCCTTCAGCAGAACAAATAATTTCG 58.389 36.000 0.00 0.00 0.00 3.46
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 2.092323 GGCCACCTAGTGTTGGAAATC 58.908 52.381 0.00 0.00 0.00 2.17
44 45 2.478134 CCTATCAAATAGTGCGCTCTGC 59.522 50.000 21.59 3.08 46.70 4.26
45 46 2.478134 GCCTATCAAATAGTGCGCTCTG 59.522 50.000 21.59 6.19 0.00 3.35
46 47 2.366916 AGCCTATCAAATAGTGCGCTCT 59.633 45.455 17.08 17.08 35.53 4.09
47 48 2.478134 CAGCCTATCAAATAGTGCGCTC 59.522 50.000 9.73 4.74 35.53 5.03
48 49 2.487934 CAGCCTATCAAATAGTGCGCT 58.512 47.619 9.73 4.58 35.53 5.92
49 50 1.532868 CCAGCCTATCAAATAGTGCGC 59.467 52.381 0.00 0.00 35.53 6.09
50 51 3.111853 TCCAGCCTATCAAATAGTGCG 57.888 47.619 0.00 0.00 35.53 5.34
51 52 5.645497 CCTTATCCAGCCTATCAAATAGTGC 59.355 44.000 0.00 0.00 32.61 4.40
52 53 5.645497 GCCTTATCCAGCCTATCAAATAGTG 59.355 44.000 0.00 0.00 0.00 2.74
53 54 5.549619 AGCCTTATCCAGCCTATCAAATAGT 59.450 40.000 0.00 0.00 0.00 2.12
54 55 6.059787 AGCCTTATCCAGCCTATCAAATAG 57.940 41.667 0.00 0.00 0.00 1.73
55 56 6.044287 TGAAGCCTTATCCAGCCTATCAAATA 59.956 38.462 0.00 0.00 0.00 1.40
56 57 5.163055 TGAAGCCTTATCCAGCCTATCAAAT 60.163 40.000 0.00 0.00 0.00 2.32
57 58 4.165950 TGAAGCCTTATCCAGCCTATCAAA 59.834 41.667 0.00 0.00 0.00 2.69
58 59 3.716353 TGAAGCCTTATCCAGCCTATCAA 59.284 43.478 0.00 0.00 0.00 2.57
59 60 3.317406 TGAAGCCTTATCCAGCCTATCA 58.683 45.455 0.00 0.00 0.00 2.15
60 61 3.580458 TCTGAAGCCTTATCCAGCCTATC 59.420 47.826 0.00 0.00 0.00 2.08
61 62 3.582208 CTCTGAAGCCTTATCCAGCCTAT 59.418 47.826 0.00 0.00 0.00 2.57
62 63 2.968574 CTCTGAAGCCTTATCCAGCCTA 59.031 50.000 0.00 0.00 0.00 3.93
63 64 1.767681 CTCTGAAGCCTTATCCAGCCT 59.232 52.381 0.00 0.00 0.00 4.58
64 65 1.202746 CCTCTGAAGCCTTATCCAGCC 60.203 57.143 0.00 0.00 0.00 4.85
65 66 1.765314 TCCTCTGAAGCCTTATCCAGC 59.235 52.381 0.00 0.00 0.00 4.85
66 67 4.640364 GATTCCTCTGAAGCCTTATCCAG 58.360 47.826 0.00 0.00 33.05 3.86
67 68 4.696479 GATTCCTCTGAAGCCTTATCCA 57.304 45.455 0.00 0.00 33.05 3.41
75 76 1.933247 CAGTCGGATTCCTCTGAAGC 58.067 55.000 15.25 0.00 38.51 3.86
76 77 1.205655 TGCAGTCGGATTCCTCTGAAG 59.794 52.381 21.08 0.00 38.51 3.02
77 78 1.066858 GTGCAGTCGGATTCCTCTGAA 60.067 52.381 21.08 12.65 38.51 3.02
78 79 0.532573 GTGCAGTCGGATTCCTCTGA 59.467 55.000 21.08 2.63 34.29 3.27
79 80 0.460987 GGTGCAGTCGGATTCCTCTG 60.461 60.000 15.74 15.74 0.00 3.35
80 81 0.904865 TGGTGCAGTCGGATTCCTCT 60.905 55.000 0.30 0.00 0.00 3.69
81 82 0.741221 GTGGTGCAGTCGGATTCCTC 60.741 60.000 0.30 0.00 0.00 3.71
82 83 1.296715 GTGGTGCAGTCGGATTCCT 59.703 57.895 0.30 0.00 0.00 3.36
83 84 1.745489 GGTGGTGCAGTCGGATTCC 60.745 63.158 0.00 0.00 0.00 3.01
84 85 1.003839 TGGTGGTGCAGTCGGATTC 60.004 57.895 0.00 0.00 0.00 2.52
85 86 1.302511 GTGGTGGTGCAGTCGGATT 60.303 57.895 0.00 0.00 0.00 3.01
86 87 2.347490 GTGGTGGTGCAGTCGGAT 59.653 61.111 0.00 0.00 0.00 4.18
87 88 3.936203 GGTGGTGGTGCAGTCGGA 61.936 66.667 0.00 0.00 0.00 4.55
90 91 3.469863 TTCCGGTGGTGGTGCAGTC 62.470 63.158 0.00 0.00 0.00 3.51
107 108 4.755266 AGCTATACAACATTCGGTCCTT 57.245 40.909 0.00 0.00 0.00 3.36
113 114 4.368315 TGGCACTAGCTATACAACATTCG 58.632 43.478 0.00 0.00 41.70 3.34
127 128 4.324471 TGCAAGGCATGGCACTAG 57.676 55.556 22.64 8.81 34.58 2.57
155 156 1.480954 GATTCACTGGAGGCGGAACTA 59.519 52.381 0.00 0.00 0.00 2.24
171 172 6.921857 CCATTTATCTTCCACTGCAATGATTC 59.078 38.462 0.00 0.00 0.00 2.52
195 196 2.262423 ATCCTTTTCGCAGCCTATCC 57.738 50.000 0.00 0.00 0.00 2.59
227 228 4.687219 GCTGCTTGTATGGTTCTAAGGGAT 60.687 45.833 0.00 0.00 0.00 3.85
329 330 0.320247 GAGCTGGCATATCTCCCACG 60.320 60.000 0.00 0.00 0.00 4.94
439 440 3.053095 ACATGGAGGAGGCAAAGAATCAT 60.053 43.478 0.00 0.00 0.00 2.45
448 449 1.303561 GTGCAACATGGAGGAGGCA 60.304 57.895 0.00 0.00 36.32 4.75
499 500 3.706698 CATAATTGCTCTCTCGTTCCGA 58.293 45.455 0.00 0.00 0.00 4.55
533 534 2.703007 CCTAGCAGAGTTAGATGGCCTT 59.297 50.000 3.32 0.00 0.00 4.35
561 562 1.747206 CGGATTGGATTGACCTCACCC 60.747 57.143 0.00 0.00 39.86 4.61
582 583 1.502527 TACGGGGCAATGGGTCCTTT 61.503 55.000 0.00 0.00 42.62 3.11
601 602 0.517316 CTAAGTTTCGCGGCAAAGCT 59.483 50.000 6.13 0.00 34.40 3.74
654 655 4.924305 TCGGTTAGGACTTATACGCAAT 57.076 40.909 0.00 0.00 0.00 3.56
672 673 0.374758 CACTCGTGGCATTTGATCGG 59.625 55.000 0.00 0.00 0.00 4.18
694 695 8.298854 TGTTGTCGACTTTTGTACTAGCTATTA 58.701 33.333 17.92 0.00 0.00 0.98
701 702 5.005586 CCGTTTGTTGTCGACTTTTGTACTA 59.994 40.000 17.92 0.26 0.00 1.82
702 703 4.201744 CCGTTTGTTGTCGACTTTTGTACT 60.202 41.667 17.92 0.00 0.00 2.73
703 704 4.023783 CCGTTTGTTGTCGACTTTTGTAC 58.976 43.478 17.92 7.10 0.00 2.90
819 852 2.224066 CCTAGTATGCTCCCGGAAACAG 60.224 54.545 0.73 0.00 0.00 3.16
820 853 1.760613 CCTAGTATGCTCCCGGAAACA 59.239 52.381 0.73 0.00 0.00 2.83
976 1059 3.371063 GTCGGTGCGAGGAGTGGA 61.371 66.667 0.00 0.00 36.23 4.02
1095 1193 1.503347 GAGGAGAGGAAGGGAGAGGAT 59.497 57.143 0.00 0.00 0.00 3.24
1493 1605 1.490693 GCACGCACAGATATCCACCG 61.491 60.000 0.00 0.40 0.00 4.94
1503 1615 2.124011 AAAACAGATTGCACGCACAG 57.876 45.000 0.00 0.00 0.00 3.66
1524 1636 1.196200 CAAGCCGAACAAACAAACGG 58.804 50.000 0.00 0.00 46.74 4.44
1537 1649 2.015227 AACAACACCAAGCCAAGCCG 62.015 55.000 0.00 0.00 0.00 5.52
1550 1662 3.202906 GCTCACCTGAACAGTAACAACA 58.797 45.455 1.18 0.00 0.00 3.33
1551 1663 3.202906 TGCTCACCTGAACAGTAACAAC 58.797 45.455 1.18 0.00 0.00 3.32
1552 1664 3.552132 TGCTCACCTGAACAGTAACAA 57.448 42.857 1.18 0.00 0.00 2.83
1663 1782 3.001736 GCATTTCTACTGGAGCGATCAAC 59.998 47.826 1.84 0.00 0.00 3.18
1682 1801 3.565482 ACATCTTTAATCGCATTCGGCAT 59.435 39.130 0.00 0.00 45.17 4.40
1683 1802 2.942376 ACATCTTTAATCGCATTCGGCA 59.058 40.909 0.00 0.00 45.17 5.69
1684 1803 3.609103 ACATCTTTAATCGCATTCGGC 57.391 42.857 0.00 0.00 39.90 5.54
1685 1804 4.035091 TGGAACATCTTTAATCGCATTCGG 59.965 41.667 0.00 0.00 36.13 4.30
1686 1805 5.155509 TGGAACATCTTTAATCGCATTCG 57.844 39.130 0.00 0.00 0.00 3.34
1769 1921 4.090066 GCATATCGACTTTGCGGTAGTATG 59.910 45.833 0.00 0.00 29.43 2.39
1792 1949 7.999679 TCAAATTTTATCAACTATCCAGGCAG 58.000 34.615 0.00 0.00 0.00 4.85
1852 2009 9.461734 ACAACTTACCCTTTAGGATAATAGGAT 57.538 33.333 0.00 0.00 39.89 3.24
1853 2010 8.711170 CACAACTTACCCTTTAGGATAATAGGA 58.289 37.037 0.00 0.00 39.89 2.94
1854 2011 8.491958 ACACAACTTACCCTTTAGGATAATAGG 58.508 37.037 0.00 0.00 39.89 2.57
1855 2012 9.901172 AACACAACTTACCCTTTAGGATAATAG 57.099 33.333 0.00 0.00 39.89 1.73
1856 2013 9.675464 CAACACAACTTACCCTTTAGGATAATA 57.325 33.333 0.00 0.00 39.89 0.98
1857 2014 8.387813 TCAACACAACTTACCCTTTAGGATAAT 58.612 33.333 0.00 0.00 39.89 1.28
1858 2015 7.747690 TCAACACAACTTACCCTTTAGGATAA 58.252 34.615 0.00 0.00 39.89 1.75
1859 2016 7.319052 TCAACACAACTTACCCTTTAGGATA 57.681 36.000 0.00 0.00 39.89 2.59
1860 2017 6.195600 TCAACACAACTTACCCTTTAGGAT 57.804 37.500 0.00 0.00 39.89 3.24
1861 2018 5.633655 TCAACACAACTTACCCTTTAGGA 57.366 39.130 0.00 0.00 39.89 2.94
1862 2019 5.768164 ACATCAACACAACTTACCCTTTAGG 59.232 40.000 0.00 0.00 43.78 2.69
1863 2020 6.485313 TGACATCAACACAACTTACCCTTTAG 59.515 38.462 0.00 0.00 0.00 1.85
1864 2021 6.358178 TGACATCAACACAACTTACCCTTTA 58.642 36.000 0.00 0.00 0.00 1.85
1865 2022 5.197451 TGACATCAACACAACTTACCCTTT 58.803 37.500 0.00 0.00 0.00 3.11
1866 2023 4.787551 TGACATCAACACAACTTACCCTT 58.212 39.130 0.00 0.00 0.00 3.95
1867 2024 4.431416 TGACATCAACACAACTTACCCT 57.569 40.909 0.00 0.00 0.00 4.34
1868 2025 5.240623 TGATTGACATCAACACAACTTACCC 59.759 40.000 0.00 0.00 36.41 3.69
1869 2026 6.312399 TGATTGACATCAACACAACTTACC 57.688 37.500 0.00 0.00 36.41 2.85
1870 2027 6.857964 CCTTGATTGACATCAACACAACTTAC 59.142 38.462 0.00 0.00 43.32 2.34
1871 2028 6.016360 CCCTTGATTGACATCAACACAACTTA 60.016 38.462 0.00 0.00 43.32 2.24
1872 2029 5.221303 CCCTTGATTGACATCAACACAACTT 60.221 40.000 0.00 0.00 43.32 2.66
1873 2030 4.279169 CCCTTGATTGACATCAACACAACT 59.721 41.667 0.00 0.00 43.32 3.16
1874 2031 4.549458 CCCTTGATTGACATCAACACAAC 58.451 43.478 0.00 0.00 43.32 3.32
1875 2032 3.005684 GCCCTTGATTGACATCAACACAA 59.994 43.478 12.36 12.36 43.32 3.33
1876 2033 2.557924 GCCCTTGATTGACATCAACACA 59.442 45.455 0.00 0.00 43.32 3.72
1877 2034 2.821969 AGCCCTTGATTGACATCAACAC 59.178 45.455 0.00 0.00 43.32 3.32
1878 2035 2.821378 CAGCCCTTGATTGACATCAACA 59.179 45.455 0.00 0.00 43.32 3.33
1879 2036 3.084039 TCAGCCCTTGATTGACATCAAC 58.916 45.455 0.00 0.00 43.32 3.18
1880 2037 3.438216 TCAGCCCTTGATTGACATCAA 57.562 42.857 0.00 0.00 45.54 2.57
1881 2038 3.084039 GTTCAGCCCTTGATTGACATCA 58.916 45.455 0.00 0.00 37.67 3.07
1882 2039 3.128242 CAGTTCAGCCCTTGATTGACATC 59.872 47.826 0.00 0.00 35.27 3.06
1883 2040 3.087031 CAGTTCAGCCCTTGATTGACAT 58.913 45.455 0.00 0.00 35.27 3.06
1884 2041 2.507484 CAGTTCAGCCCTTGATTGACA 58.493 47.619 0.00 0.00 35.27 3.58
1885 2042 1.200948 GCAGTTCAGCCCTTGATTGAC 59.799 52.381 0.00 0.00 35.27 3.18
1886 2043 1.202915 TGCAGTTCAGCCCTTGATTGA 60.203 47.619 0.00 0.00 35.27 2.57
1887 2044 1.201647 CTGCAGTTCAGCCCTTGATTG 59.798 52.381 5.25 0.00 35.78 2.67
1888 2045 1.202976 ACTGCAGTTCAGCCCTTGATT 60.203 47.619 15.25 0.00 46.76 2.57
1889 2046 0.403271 ACTGCAGTTCAGCCCTTGAT 59.597 50.000 15.25 0.00 46.76 2.57
1890 2047 0.183492 AACTGCAGTTCAGCCCTTGA 59.817 50.000 26.36 0.00 46.76 3.02
1891 2048 0.313043 CAACTGCAGTTCAGCCCTTG 59.687 55.000 28.97 12.64 46.76 3.61
1892 2049 1.458639 GCAACTGCAGTTCAGCCCTT 61.459 55.000 28.97 3.01 46.76 3.95
1893 2050 1.900498 GCAACTGCAGTTCAGCCCT 60.900 57.895 28.97 3.85 46.76 5.19
1894 2051 2.647297 GCAACTGCAGTTCAGCCC 59.353 61.111 28.97 11.29 46.76 5.19
1895 2052 2.647297 GGCAACTGCAGTTCAGCC 59.353 61.111 32.90 32.90 46.76 4.85
1896 2053 1.458639 AAGGGCAACTGCAGTTCAGC 61.459 55.000 28.97 27.20 46.76 4.26
1898 2055 1.032014 GAAAGGGCAACTGCAGTTCA 58.968 50.000 28.97 0.00 44.36 3.18
1899 2056 1.032014 TGAAAGGGCAACTGCAGTTC 58.968 50.000 28.97 21.43 44.36 3.01
1900 2057 1.708341 ATGAAAGGGCAACTGCAGTT 58.292 45.000 26.36 26.36 44.36 3.16
1901 2058 1.615392 GAATGAAAGGGCAACTGCAGT 59.385 47.619 15.25 15.25 44.36 4.40
1902 2059 1.614903 TGAATGAAAGGGCAACTGCAG 59.385 47.619 13.48 13.48 44.36 4.41
1903 2060 1.340889 GTGAATGAAAGGGCAACTGCA 59.659 47.619 3.76 0.00 44.36 4.41
1904 2061 1.337167 GGTGAATGAAAGGGCAACTGC 60.337 52.381 0.00 0.00 41.14 4.40
1905 2062 2.242043 AGGTGAATGAAAGGGCAACTG 58.758 47.619 0.00 0.00 0.00 3.16
1906 2063 2.683211 AGGTGAATGAAAGGGCAACT 57.317 45.000 0.00 0.00 0.00 3.16
1907 2064 3.686016 TCTAGGTGAATGAAAGGGCAAC 58.314 45.455 0.00 0.00 0.00 4.17
1908 2065 4.380843 TTCTAGGTGAATGAAAGGGCAA 57.619 40.909 0.00 0.00 0.00 4.52
1909 2066 4.591321 ATTCTAGGTGAATGAAAGGGCA 57.409 40.909 0.00 0.00 43.20 5.36
1910 2067 5.921962 AAATTCTAGGTGAATGAAAGGGC 57.078 39.130 0.00 0.00 43.99 5.19
1911 2068 6.633856 CCAAAATTCTAGGTGAATGAAAGGG 58.366 40.000 0.00 0.00 43.99 3.95
1912 2069 6.071165 AGCCAAAATTCTAGGTGAATGAAAGG 60.071 38.462 0.00 0.00 43.99 3.11
1913 2070 6.928520 AGCCAAAATTCTAGGTGAATGAAAG 58.071 36.000 0.00 0.00 43.99 2.62
1914 2071 6.916360 AGCCAAAATTCTAGGTGAATGAAA 57.084 33.333 0.00 0.00 43.99 2.69
1915 2072 6.295236 CCAAGCCAAAATTCTAGGTGAATGAA 60.295 38.462 0.00 0.00 43.99 2.57
1916 2073 5.185635 CCAAGCCAAAATTCTAGGTGAATGA 59.814 40.000 0.00 0.00 43.99 2.57
1917 2074 5.047092 ACCAAGCCAAAATTCTAGGTGAATG 60.047 40.000 0.00 0.00 43.99 2.67
1918 2075 5.086621 ACCAAGCCAAAATTCTAGGTGAAT 58.913 37.500 0.00 0.00 46.49 2.57
1919 2076 4.479158 ACCAAGCCAAAATTCTAGGTGAA 58.521 39.130 0.00 0.00 39.24 3.18
1920 2077 4.079253 GACCAAGCCAAAATTCTAGGTGA 58.921 43.478 0.00 0.00 0.00 4.02
1921 2078 4.082125 AGACCAAGCCAAAATTCTAGGTG 58.918 43.478 0.00 0.00 0.00 4.00
1922 2079 4.388577 AGACCAAGCCAAAATTCTAGGT 57.611 40.909 0.00 0.00 0.00 3.08
1923 2080 5.358160 CCTAAGACCAAGCCAAAATTCTAGG 59.642 44.000 0.00 0.00 0.00 3.02
1924 2081 5.163612 GCCTAAGACCAAGCCAAAATTCTAG 60.164 44.000 0.00 0.00 0.00 2.43
1925 2082 4.705023 GCCTAAGACCAAGCCAAAATTCTA 59.295 41.667 0.00 0.00 0.00 2.10
1926 2083 3.511540 GCCTAAGACCAAGCCAAAATTCT 59.488 43.478 0.00 0.00 0.00 2.40
1927 2084 3.511540 AGCCTAAGACCAAGCCAAAATTC 59.488 43.478 0.00 0.00 0.00 2.17
1928 2085 3.510459 AGCCTAAGACCAAGCCAAAATT 58.490 40.909 0.00 0.00 0.00 1.82
1929 2086 3.175438 AGCCTAAGACCAAGCCAAAAT 57.825 42.857 0.00 0.00 0.00 1.82
1930 2087 2.675658 AGCCTAAGACCAAGCCAAAA 57.324 45.000 0.00 0.00 0.00 2.44
1931 2088 2.158534 TGAAGCCTAAGACCAAGCCAAA 60.159 45.455 0.00 0.00 0.00 3.28
1932 2089 1.423541 TGAAGCCTAAGACCAAGCCAA 59.576 47.619 0.00 0.00 0.00 4.52
1933 2090 1.003580 CTGAAGCCTAAGACCAAGCCA 59.996 52.381 0.00 0.00 0.00 4.75
1934 2091 1.279271 TCTGAAGCCTAAGACCAAGCC 59.721 52.381 0.00 0.00 0.00 4.35
1935 2092 2.770164 TCTGAAGCCTAAGACCAAGC 57.230 50.000 0.00 0.00 0.00 4.01
1957 2114 9.000486 GCACTAGATGGTTAACTCTTAAGTTTT 58.000 33.333 5.42 0.00 43.28 2.43
1958 2115 7.331193 CGCACTAGATGGTTAACTCTTAAGTTT 59.669 37.037 5.42 0.17 43.28 2.66
1960 2117 6.152323 TCGCACTAGATGGTTAACTCTTAAGT 59.848 38.462 5.42 0.70 37.32 2.24
1961 2118 6.561614 TCGCACTAGATGGTTAACTCTTAAG 58.438 40.000 5.42 0.00 0.00 1.85
1962 2119 6.519679 TCGCACTAGATGGTTAACTCTTAA 57.480 37.500 5.42 0.00 0.00 1.85
1963 2120 6.519679 TTCGCACTAGATGGTTAACTCTTA 57.480 37.500 5.42 0.00 0.00 2.10
1964 2121 5.401531 TTCGCACTAGATGGTTAACTCTT 57.598 39.130 5.42 0.00 0.00 2.85
1965 2122 5.047235 ACTTTCGCACTAGATGGTTAACTCT 60.047 40.000 5.42 4.15 0.00 3.24
1966 2123 5.062308 CACTTTCGCACTAGATGGTTAACTC 59.938 44.000 5.42 0.00 0.00 3.01
1967 2124 4.929808 CACTTTCGCACTAGATGGTTAACT 59.070 41.667 5.42 0.00 0.00 2.24
1968 2125 4.435651 GCACTTTCGCACTAGATGGTTAAC 60.436 45.833 0.00 0.00 0.00 2.01
1969 2126 3.682858 GCACTTTCGCACTAGATGGTTAA 59.317 43.478 0.00 0.00 0.00 2.01
1970 2127 3.056107 AGCACTTTCGCACTAGATGGTTA 60.056 43.478 0.00 0.00 0.00 2.85
1971 2128 2.076863 GCACTTTCGCACTAGATGGTT 58.923 47.619 0.00 0.00 0.00 3.67
1972 2129 1.276421 AGCACTTTCGCACTAGATGGT 59.724 47.619 0.00 0.00 0.00 3.55
1973 2130 2.015736 AGCACTTTCGCACTAGATGG 57.984 50.000 0.00 0.00 0.00 3.51
1974 2131 3.775202 ACTAGCACTTTCGCACTAGATG 58.225 45.455 0.00 0.00 36.45 2.90
1975 2132 4.457834 AACTAGCACTTTCGCACTAGAT 57.542 40.909 0.00 0.00 36.45 1.98
1976 2133 3.936372 AACTAGCACTTTCGCACTAGA 57.064 42.857 0.00 0.00 36.45 2.43
1977 2134 3.368236 GGAAACTAGCACTTTCGCACTAG 59.632 47.826 0.00 0.00 38.44 2.57
1978 2135 3.323243 GGAAACTAGCACTTTCGCACTA 58.677 45.455 0.00 0.00 0.00 2.74
1979 2136 2.143925 GGAAACTAGCACTTTCGCACT 58.856 47.619 0.00 0.00 0.00 4.40
1980 2137 1.197036 GGGAAACTAGCACTTTCGCAC 59.803 52.381 13.31 0.00 39.30 5.34
1981 2138 1.519408 GGGAAACTAGCACTTTCGCA 58.481 50.000 13.31 0.00 39.30 5.10
1982 2139 0.803117 GGGGAAACTAGCACTTTCGC 59.197 55.000 10.96 10.96 38.96 4.70
1983 2140 1.003233 AGGGGGAAACTAGCACTTTCG 59.997 52.381 0.00 0.00 0.00 3.46
1984 2141 2.618302 GGAGGGGGAAACTAGCACTTTC 60.618 54.545 0.00 0.00 0.00 2.62
1985 2142 1.354705 GGAGGGGGAAACTAGCACTTT 59.645 52.381 0.00 0.00 0.00 2.66
1986 2143 0.992695 GGAGGGGGAAACTAGCACTT 59.007 55.000 0.00 0.00 0.00 3.16
1987 2144 0.914902 GGGAGGGGGAAACTAGCACT 60.915 60.000 0.00 0.00 0.00 4.40
1988 2145 1.205460 TGGGAGGGGGAAACTAGCAC 61.205 60.000 0.00 0.00 0.00 4.40
1989 2146 0.914417 CTGGGAGGGGGAAACTAGCA 60.914 60.000 0.00 0.00 0.00 3.49
1990 2147 0.620700 TCTGGGAGGGGGAAACTAGC 60.621 60.000 0.00 0.00 0.00 3.42
1991 2148 1.008449 TCTCTGGGAGGGGGAAACTAG 59.992 57.143 0.00 0.00 0.00 2.57
1992 2149 1.098589 TCTCTGGGAGGGGGAAACTA 58.901 55.000 0.00 0.00 0.00 2.24
1993 2150 0.196118 TTCTCTGGGAGGGGGAAACT 59.804 55.000 0.00 0.00 0.00 2.66
1994 2151 1.064389 CATTCTCTGGGAGGGGGAAAC 60.064 57.143 0.00 0.00 0.00 2.78
1995 2152 1.298953 CATTCTCTGGGAGGGGGAAA 58.701 55.000 0.00 0.00 0.00 3.13
1996 2153 0.624500 CCATTCTCTGGGAGGGGGAA 60.625 60.000 0.00 0.00 41.82 3.97
1997 2154 1.004758 CCATTCTCTGGGAGGGGGA 59.995 63.158 0.00 0.00 41.82 4.81
1998 2155 3.666122 CCATTCTCTGGGAGGGGG 58.334 66.667 0.00 0.00 41.82 5.40
2005 2162 1.770658 TGCCACTATCCCATTCTCTGG 59.229 52.381 0.00 0.00 45.51 3.86
2006 2163 3.565764 TTGCCACTATCCCATTCTCTG 57.434 47.619 0.00 0.00 0.00 3.35
2007 2164 5.912149 TTATTGCCACTATCCCATTCTCT 57.088 39.130 0.00 0.00 0.00 3.10
2008 2165 6.599638 GGTATTATTGCCACTATCCCATTCTC 59.400 42.308 0.00 0.00 0.00 2.87
2009 2166 6.485171 GGTATTATTGCCACTATCCCATTCT 58.515 40.000 0.00 0.00 0.00 2.40
2010 2167 5.652452 GGGTATTATTGCCACTATCCCATTC 59.348 44.000 0.00 0.00 33.33 2.67
2011 2168 5.518367 GGGGTATTATTGCCACTATCCCATT 60.518 44.000 0.00 0.00 34.62 3.16
2012 2169 4.017499 GGGGTATTATTGCCACTATCCCAT 60.017 45.833 0.00 0.00 34.62 4.00
2013 2170 3.332485 GGGGTATTATTGCCACTATCCCA 59.668 47.826 0.00 0.00 34.62 4.37
2014 2171 3.591977 AGGGGTATTATTGCCACTATCCC 59.408 47.826 0.00 0.00 39.98 3.85
2015 2172 4.288626 TGAGGGGTATTATTGCCACTATCC 59.711 45.833 0.00 0.00 42.14 2.59
2016 2173 5.013183 AGTGAGGGGTATTATTGCCACTATC 59.987 44.000 0.00 0.00 42.14 2.08
2017 2174 4.913968 AGTGAGGGGTATTATTGCCACTAT 59.086 41.667 0.00 0.00 42.14 2.12
2018 2175 4.102524 CAGTGAGGGGTATTATTGCCACTA 59.897 45.833 0.00 0.00 42.14 2.74
2019 2176 3.117888 CAGTGAGGGGTATTATTGCCACT 60.118 47.826 0.00 0.00 45.21 4.00
2020 2177 3.214328 CAGTGAGGGGTATTATTGCCAC 58.786 50.000 0.00 0.00 0.00 5.01
2021 2178 2.174639 CCAGTGAGGGGTATTATTGCCA 59.825 50.000 0.00 0.00 0.00 4.92
2022 2179 2.174854 ACCAGTGAGGGGTATTATTGCC 59.825 50.000 0.00 0.00 43.89 4.52
2023 2180 3.118038 TGACCAGTGAGGGGTATTATTGC 60.118 47.826 0.00 0.00 43.89 3.56
2024 2181 4.771114 TGACCAGTGAGGGGTATTATTG 57.229 45.455 0.00 0.00 43.89 1.90
2025 2182 5.789574 TTTGACCAGTGAGGGGTATTATT 57.210 39.130 0.00 0.00 43.89 1.40
2026 2183 5.789574 TTTTGACCAGTGAGGGGTATTAT 57.210 39.130 0.00 0.00 43.89 1.28
2027 2184 5.789574 ATTTTGACCAGTGAGGGGTATTA 57.210 39.130 0.00 0.00 43.89 0.98
2028 2185 4.675063 ATTTTGACCAGTGAGGGGTATT 57.325 40.909 0.00 0.00 43.89 1.89
2029 2186 5.036916 TCTATTTTGACCAGTGAGGGGTAT 58.963 41.667 0.00 0.00 43.89 2.73
2030 2187 4.431378 TCTATTTTGACCAGTGAGGGGTA 58.569 43.478 0.00 0.00 43.89 3.69
2031 2188 3.256704 TCTATTTTGACCAGTGAGGGGT 58.743 45.455 0.00 0.00 43.89 4.95
2032 2189 4.301072 TTCTATTTTGACCAGTGAGGGG 57.699 45.455 0.00 0.00 43.89 4.79
2033 2190 7.393234 TGTTATTTCTATTTTGACCAGTGAGGG 59.607 37.037 0.00 0.00 43.89 4.30
2034 2191 8.237267 GTGTTATTTCTATTTTGACCAGTGAGG 58.763 37.037 0.00 0.00 45.67 3.86
2035 2192 9.003658 AGTGTTATTTCTATTTTGACCAGTGAG 57.996 33.333 0.00 0.00 0.00 3.51
2036 2193 8.918202 AGTGTTATTTCTATTTTGACCAGTGA 57.082 30.769 0.00 0.00 0.00 3.41
2040 2197 9.667107 CCTCTAGTGTTATTTCTATTTTGACCA 57.333 33.333 0.00 0.00 0.00 4.02
2041 2198 8.613482 GCCTCTAGTGTTATTTCTATTTTGACC 58.387 37.037 0.00 0.00 0.00 4.02
2042 2199 9.384764 AGCCTCTAGTGTTATTTCTATTTTGAC 57.615 33.333 0.00 0.00 0.00 3.18
2047 2204 8.569641 CGTCTAGCCTCTAGTGTTATTTCTATT 58.430 37.037 1.34 0.00 0.00 1.73
2048 2205 7.720515 ACGTCTAGCCTCTAGTGTTATTTCTAT 59.279 37.037 1.34 0.00 0.00 1.98
2049 2206 7.052873 ACGTCTAGCCTCTAGTGTTATTTCTA 58.947 38.462 1.34 0.00 0.00 2.10
2050 2207 5.887035 ACGTCTAGCCTCTAGTGTTATTTCT 59.113 40.000 1.34 0.00 0.00 2.52
2051 2208 6.134040 ACGTCTAGCCTCTAGTGTTATTTC 57.866 41.667 1.34 0.00 0.00 2.17
2052 2209 6.827762 ACTACGTCTAGCCTCTAGTGTTATTT 59.172 38.462 0.00 0.00 0.00 1.40
2053 2210 6.355747 ACTACGTCTAGCCTCTAGTGTTATT 58.644 40.000 0.00 0.00 0.00 1.40
2054 2211 5.927819 ACTACGTCTAGCCTCTAGTGTTAT 58.072 41.667 0.00 0.00 0.00 1.89
2055 2212 5.350504 ACTACGTCTAGCCTCTAGTGTTA 57.649 43.478 0.00 0.00 0.00 2.41
2056 2213 4.219264 ACTACGTCTAGCCTCTAGTGTT 57.781 45.455 0.00 0.00 0.00 3.32
2057 2214 3.910568 ACTACGTCTAGCCTCTAGTGT 57.089 47.619 0.00 4.48 0.00 3.55
2058 2215 8.444715 CAAATATACTACGTCTAGCCTCTAGTG 58.555 40.741 0.00 0.00 0.00 2.74
2059 2216 7.607223 CCAAATATACTACGTCTAGCCTCTAGT 59.393 40.741 0.00 0.00 0.00 2.57
2060 2217 7.607223 ACCAAATATACTACGTCTAGCCTCTAG 59.393 40.741 0.00 0.00 0.00 2.43
2132 2293 7.921041 TCCTCATCTCAAGGTAAGTCATTAT 57.079 36.000 0.00 0.00 35.29 1.28
2133 2294 7.921041 ATCCTCATCTCAAGGTAAGTCATTA 57.079 36.000 0.00 0.00 35.29 1.90
2141 2302 9.379770 TCATAATTGTATCCTCATCTCAAGGTA 57.620 33.333 0.00 0.00 35.29 3.08
2159 2320 9.608617 GTGCTCTCACAAATGATATCATAATTG 57.391 33.333 18.47 20.01 42.66 2.32
2219 6022 6.937436 ACGACCTGTTAAAGAAAGAAATGT 57.063 33.333 0.00 0.00 0.00 2.71
2220 6023 7.414436 TGAACGACCTGTTAAAGAAAGAAATG 58.586 34.615 0.00 0.00 42.09 2.32
2221 6024 7.562454 TGAACGACCTGTTAAAGAAAGAAAT 57.438 32.000 0.00 0.00 42.09 2.17
2240 6047 5.447624 AAAGGGGTAACAAGATTTGAACG 57.552 39.130 0.00 0.00 39.74 3.95
2317 6178 2.093711 GGCACCCAAACAGTTTCACTTT 60.094 45.455 0.00 0.00 0.00 2.66
2340 6202 3.430218 CGTGATGAACAGAAACAGAGGAC 59.570 47.826 0.00 0.00 0.00 3.85
2539 6403 5.754782 ACTGATAATTGTGAATAGGGCACA 58.245 37.500 0.00 0.00 43.89 4.57
2554 6418 9.942850 CCCAAAAAGGTTCAATAAACTGATAAT 57.057 29.630 0.00 0.00 38.02 1.28
2578 6442 7.449704 AGAAGAATGATGATGTTATTAAGGCCC 59.550 37.037 0.00 0.00 0.00 5.80
2609 6475 9.912634 CCGAAGCATGGAAATAATAACAATAAT 57.087 29.630 0.00 0.00 0.00 1.28
2610 6476 8.908903 ACCGAAGCATGGAAATAATAACAATAA 58.091 29.630 0.00 0.00 0.00 1.40
2611 6477 8.458573 ACCGAAGCATGGAAATAATAACAATA 57.541 30.769 0.00 0.00 0.00 1.90
2612 6478 7.346751 ACCGAAGCATGGAAATAATAACAAT 57.653 32.000 0.00 0.00 0.00 2.71
2613 6479 6.767524 ACCGAAGCATGGAAATAATAACAA 57.232 33.333 0.00 0.00 0.00 2.83
2614 6480 6.767524 AACCGAAGCATGGAAATAATAACA 57.232 33.333 0.00 0.00 0.00 2.41
2615 6481 7.254852 TGAAACCGAAGCATGGAAATAATAAC 58.745 34.615 0.00 0.00 0.00 1.89
2881 6770 1.851304 TCAAAGGGGCATAAGCAAGG 58.149 50.000 0.00 0.00 44.61 3.61
2946 6932 4.055360 TCCTGAACATACAACGTTGTCAG 58.945 43.478 35.40 30.64 42.35 3.51
3147 7141 7.346751 ACCATTCATGTGTTCAAACTTTAGT 57.653 32.000 0.00 0.00 0.00 2.24
3255 7255 2.808543 GTCACCTAGTTGGCTTGTTCAG 59.191 50.000 0.00 0.00 40.22 3.02
3302 7306 9.262472 GAGAAATGCGTATGTAAGTTTGTAAAG 57.738 33.333 0.00 0.00 0.00 1.85
3319 7332 7.433131 AGCAATATAACAAACATGAGAAATGCG 59.567 33.333 0.00 0.00 0.00 4.73
3365 7378 5.319140 TGACTCTAGTTGCGCTGTTATTA 57.681 39.130 9.73 0.00 0.00 0.98
3386 7399 6.939132 ATTATGAGGTTTGAAGCAGAGATG 57.061 37.500 0.00 0.00 0.00 2.90
3387 7400 7.066766 GTCAATTATGAGGTTTGAAGCAGAGAT 59.933 37.037 0.00 0.00 35.88 2.75
3402 7415 8.432805 ACTTATACTTGGGGAGTCAATTATGAG 58.567 37.037 0.00 0.00 39.86 2.90
3407 7420 6.653989 CAGACTTATACTTGGGGAGTCAATT 58.346 40.000 4.83 0.00 39.27 2.32
3409 7422 4.081087 GCAGACTTATACTTGGGGAGTCAA 60.081 45.833 4.83 0.00 39.27 3.18
3411 7424 3.707102 AGCAGACTTATACTTGGGGAGTC 59.293 47.826 0.00 0.00 39.86 3.36
3412 7425 3.725634 AGCAGACTTATACTTGGGGAGT 58.274 45.455 0.00 0.00 42.55 3.85
3447 7460 7.063898 CAGAACTCACGGCATCCAATATAATAG 59.936 40.741 0.00 0.00 0.00 1.73
3581 7626 9.095065 ACTGTAGTTCAAACCGCTATAATAAAG 57.905 33.333 0.00 0.00 0.00 1.85
3584 7629 7.864379 GCTACTGTAGTTCAAACCGCTATAATA 59.136 37.037 15.71 0.00 0.00 0.98
3642 7687 3.712016 TGCCACACAATATACCAGTGT 57.288 42.857 0.00 0.00 46.54 3.55
3651 7696 4.949238 AGCAAACTATCATGCCACACAATA 59.051 37.500 0.00 0.00 43.57 1.90
3697 7756 2.821969 ACTTGATAAGCCAGGTTGCAAG 59.178 45.455 17.72 17.72 37.75 4.01
3713 7772 9.112725 CCAGATGTATTGAATGTTGATACTTGA 57.887 33.333 0.00 0.00 0.00 3.02
3714 7773 8.896744 ACCAGATGTATTGAATGTTGATACTTG 58.103 33.333 0.00 0.00 0.00 3.16
3715 7774 9.113838 GACCAGATGTATTGAATGTTGATACTT 57.886 33.333 0.00 0.00 0.00 2.24
3716 7775 8.489489 AGACCAGATGTATTGAATGTTGATACT 58.511 33.333 0.00 0.00 0.00 2.12
3717 7776 8.554528 CAGACCAGATGTATTGAATGTTGATAC 58.445 37.037 0.00 0.00 0.00 2.24
3825 7915 9.914834 AGTAAATGTAGAAATAGGCACCATTTA 57.085 29.630 0.00 0.00 34.15 1.40
3860 7951 9.979578 AACAAAGAAACATAAGCACATTTATCA 57.020 25.926 0.00 0.00 0.00 2.15
3908 8007 5.811399 TGAAAATATGTAGGCACGAAAGG 57.189 39.130 0.00 0.00 0.00 3.11
3950 8049 8.682710 ACGCCTGTTAAAATCAACATACATAAT 58.317 29.630 0.00 0.00 37.75 1.28
3951 8050 8.046294 ACGCCTGTTAAAATCAACATACATAA 57.954 30.769 0.00 0.00 37.75 1.90
3952 8051 7.618502 ACGCCTGTTAAAATCAACATACATA 57.381 32.000 0.00 0.00 37.75 2.29
3953 8052 6.509418 ACGCCTGTTAAAATCAACATACAT 57.491 33.333 0.00 0.00 37.75 2.29
3955 8054 6.959311 CAGTACGCCTGTTAAAATCAACATAC 59.041 38.462 0.00 0.00 37.75 2.39
4165 8267 3.334583 TTTAGTCACAGGGCTAAGCAG 57.665 47.619 0.00 0.00 0.00 4.24
4205 8471 3.780294 AGGGAGCAATATACTTGACCACA 59.220 43.478 0.00 0.00 0.00 4.17
4253 8537 4.957606 ATAAATAAACTGGGTGGGGTGA 57.042 40.909 0.00 0.00 0.00 4.02
4272 10218 6.704493 AGTCGTGAACAAAGTAGCAAGAAATA 59.296 34.615 0.00 0.00 0.00 1.40
4276 10222 4.054780 AGTCGTGAACAAAGTAGCAAGA 57.945 40.909 0.00 0.00 0.00 3.02
4390 10343 7.669722 TCTTCAATGCCAGGTAGAAACTTTAAT 59.330 33.333 0.00 0.00 0.00 1.40
4429 10382 2.180017 CGCATCCTTGTTGCCAGC 59.820 61.111 0.00 0.00 36.75 4.85
4488 10441 3.367498 GCAGGTTACTCTGAAGATCACGT 60.367 47.826 0.00 0.00 36.93 4.49
4490 10443 3.526534 GGCAGGTTACTCTGAAGATCAC 58.473 50.000 0.00 0.00 36.93 3.06
4542 10495 6.810182 CCCTTCAAAAGCAAGAATAACTGATG 59.190 38.462 0.00 0.00 0.00 3.07
4543 10496 6.573094 GCCCTTCAAAAGCAAGAATAACTGAT 60.573 38.462 0.00 0.00 0.00 2.90
4545 10498 4.925646 GCCCTTCAAAAGCAAGAATAACTG 59.074 41.667 0.00 0.00 0.00 3.16
4546 10499 4.835056 AGCCCTTCAAAAGCAAGAATAACT 59.165 37.500 0.00 0.00 0.00 2.24
4951 10905 0.541392 ACATATTCCTCAGCGGTGCA 59.459 50.000 10.38 0.00 0.00 4.57
5036 10990 7.506114 TCTGTAGTTTCCCATTATGTCCATAC 58.494 38.462 0.00 0.00 0.00 2.39
5048 11002 5.309543 TCCTTTCTGAATCTGTAGTTTCCCA 59.690 40.000 0.00 0.00 0.00 4.37
5050 11004 7.445707 AGTTTCCTTTCTGAATCTGTAGTTTCC 59.554 37.037 0.00 0.00 0.00 3.13
5090 11044 2.832733 TGATGATTGCTTGCCCATCAAA 59.167 40.909 14.91 4.44 41.41 2.69
5092 11046 2.028876 CTGATGATTGCTTGCCCATCA 58.971 47.619 15.76 15.76 41.90 3.07
5313 11267 2.895372 CCCATGTAGCGGCGGAAC 60.895 66.667 9.78 0.00 0.00 3.62
5803 13807 3.749064 GAGCGGAGTCACGGAGCA 61.749 66.667 0.00 0.00 0.00 4.26
5970 13974 6.266131 AGGATAGCATTCTTGGGTTTCATA 57.734 37.500 0.00 0.00 0.00 2.15
6014 14027 3.402628 TGTCCAACTAGCTGTTCTTCC 57.597 47.619 0.00 0.00 36.63 3.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.