Multiple sequence alignment - TraesCS7B01G343100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G343100 chr7B 100.000 4207 0 0 328 4534 598463898 598468104 0.000000e+00 7769.0
1 TraesCS7B01G343100 chr7B 90.831 1756 92 33 2792 4534 644527745 644529444 0.000000e+00 2287.0
2 TraesCS7B01G343100 chr7B 84.868 608 51 19 841 1419 644525960 644526555 3.930000e-160 575.0
3 TraesCS7B01G343100 chr7B 85.439 570 45 14 1804 2354 644526849 644527399 3.960000e-155 558.0
4 TraesCS7B01G343100 chr7B 92.625 339 16 7 2422 2758 644527414 644527745 3.170000e-131 479.0
5 TraesCS7B01G343100 chr7B 95.161 186 7 1 345 528 711404452 711404637 4.440000e-75 292.0
6 TraesCS7B01G343100 chr7B 96.491 57 1 1 922 977 598010242 598010298 4.830000e-15 93.5
7 TraesCS7B01G343100 chr7B 100.000 29 0 0 1 29 598463571 598463599 2.000000e-03 54.7
8 TraesCS7B01G343100 chr7D 88.264 1653 108 36 2170 3790 552952930 552954528 0.000000e+00 1899.0
9 TraesCS7B01G343100 chr7D 88.390 534 39 7 4012 4534 552954527 552955048 4.980000e-174 621.0
10 TraesCS7B01G343100 chr7D 83.359 649 47 17 693 1306 552951796 552952418 1.110000e-150 544.0
11 TraesCS7B01G343100 chr7D 90.735 313 17 4 1861 2172 552952516 552952817 1.520000e-109 407.0
12 TraesCS7B01G343100 chr7D 100.000 29 0 0 1 29 21314525 21314497 2.000000e-03 54.7
13 TraesCS7B01G343100 chr7A 87.759 1495 124 30 3063 4534 638700058 638701516 0.000000e+00 1692.0
14 TraesCS7B01G343100 chr7A 94.247 591 20 7 2494 3072 638699073 638699661 0.000000e+00 891.0
15 TraesCS7B01G343100 chr7A 90.508 590 36 5 1920 2496 638698387 638698969 0.000000e+00 761.0
16 TraesCS7B01G343100 chr7A 85.448 536 47 20 925 1447 638697558 638698075 3.110000e-146 529.0
17 TraesCS7B01G343100 chr7A 96.257 187 5 2 1636 1822 48816607 48816423 5.700000e-79 305.0
18 TraesCS7B01G343100 chr7A 89.516 124 12 1 1467 1589 638698148 638698271 6.070000e-34 156.0
19 TraesCS7B01G343100 chr5A 99.419 172 1 0 1633 1804 680850643 680850814 3.410000e-81 313.0
20 TraesCS7B01G343100 chr5A 98.857 175 1 1 1634 1807 403285454 403285628 1.220000e-80 311.0
21 TraesCS7B01G343100 chr1B 99.419 172 1 0 1632 1803 449828208 449828379 3.410000e-81 313.0
22 TraesCS7B01G343100 chr1B 94.608 204 3 7 1637 1837 246770708 246770906 4.410000e-80 309.0
23 TraesCS7B01G343100 chr1B 94.175 206 7 4 1619 1824 319958996 319958796 4.410000e-80 309.0
24 TraesCS7B01G343100 chr1B 98.305 177 2 1 1637 1813 321238407 321238232 4.410000e-80 309.0
25 TraesCS7B01G343100 chr1B 95.263 190 7 1 345 532 42244883 42245072 2.650000e-77 300.0
26 TraesCS7B01G343100 chr1B 95.238 189 7 1 345 531 654304966 654304778 9.540000e-77 298.0
27 TraesCS7B01G343100 chr1B 72.627 632 153 17 2908 3528 137174886 137175508 1.660000e-44 191.0
28 TraesCS7B01G343100 chr1B 79.012 243 51 0 1935 2177 137177948 137178190 2.810000e-37 167.0
29 TraesCS7B01G343100 chr1B 79.012 243 51 0 1935 2177 137446007 137446249 2.810000e-37 167.0
30 TraesCS7B01G343100 chr4B 98.857 175 1 1 1631 1804 553510692 553510518 1.220000e-80 311.0
31 TraesCS7B01G343100 chr4B 95.161 186 7 1 345 528 656778919 656779104 4.440000e-75 292.0
32 TraesCS7B01G343100 chr4A 98.851 174 2 0 1631 1804 89423081 89423254 1.220000e-80 311.0
33 TraesCS7B01G343100 chr4A 95.161 186 7 1 345 528 731966286 731966471 4.440000e-75 292.0
34 TraesCS7B01G343100 chr5B 95.699 186 6 1 345 528 436092406 436092591 9.540000e-77 298.0
35 TraesCS7B01G343100 chr3B 95.238 189 7 1 345 531 1397431 1397243 9.540000e-77 298.0
36 TraesCS7B01G343100 chr3B 95.161 186 7 1 345 528 29278787 29278972 4.440000e-75 292.0
37 TraesCS7B01G343100 chr3B 94.709 189 8 1 345 531 800295766 800295578 4.440000e-75 292.0
38 TraesCS7B01G343100 chr1D 79.424 243 50 0 1935 2177 84723579 84723821 6.030000e-39 172.0
39 TraesCS7B01G343100 chr1A 79.424 243 50 0 1935 2177 78954002 78954244 6.030000e-39 172.0
40 TraesCS7B01G343100 chr6B 100.000 29 0 0 1 29 616266639 616266611 2.000000e-03 54.7
41 TraesCS7B01G343100 chr5D 100.000 29 0 0 1 29 363196505 363196477 2.000000e-03 54.7
42 TraesCS7B01G343100 chr5D 100.000 29 0 0 1 29 504460488 504460460 2.000000e-03 54.7
43 TraesCS7B01G343100 chr4D 100.000 29 0 0 1 29 461502512 461502484 2.000000e-03 54.7
44 TraesCS7B01G343100 chr3D 100.000 29 0 0 1 29 602685218 602685190 2.000000e-03 54.7
45 TraesCS7B01G343100 chr2D 100.000 29 0 0 1 29 16111494 16111522 2.000000e-03 54.7
46 TraesCS7B01G343100 chr2B 100.000 29 0 0 1 29 689389765 689389793 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G343100 chr7B 598463571 598468104 4533 False 3911.85 7769 100.00000 1 4534 2 chr7B.!!$F3 4533
1 TraesCS7B01G343100 chr7B 644525960 644529444 3484 False 974.75 2287 88.44075 841 4534 4 chr7B.!!$F4 3693
2 TraesCS7B01G343100 chr7D 552951796 552955048 3252 False 867.75 1899 87.68700 693 4534 4 chr7D.!!$F1 3841
3 TraesCS7B01G343100 chr7A 638697558 638701516 3958 False 805.80 1692 89.49560 925 4534 5 chr7A.!!$F1 3609

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
644 645 0.032540 GCCAAGGTGAACCAGCAAAG 59.967 55.0 1.62 0.0 38.89 2.77 F
1737 1924 0.037877 AAGTGCAATGCAGAGAGGCT 59.962 50.0 8.73 0.0 40.08 4.58 F
2144 2342 0.390078 TATTCCGGCGCGACAAGAAA 60.390 50.0 14.85 0.0 0.00 2.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1763 1950 0.036875 GGTGAAGTCCTCCCCACTTG 59.963 60.0 0.0 0.0 34.10 3.16 R
3468 4345 0.603707 CCACACACCATGTTCTCGCT 60.604 55.0 0.0 0.0 40.64 4.93 R
4088 4988 0.330604 AGGCTCTGGCATGAATGTGT 59.669 50.0 0.0 0.0 40.87 3.72 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.329300 GGACTGAGCTGAAGGCAAA 57.671 52.632 0.00 0.00 44.79 3.68
19 20 1.831580 GGACTGAGCTGAAGGCAAAT 58.168 50.000 0.00 0.00 44.79 2.32
20 21 2.165998 GGACTGAGCTGAAGGCAAATT 58.834 47.619 0.00 0.00 44.79 1.82
21 22 2.560105 GGACTGAGCTGAAGGCAAATTT 59.440 45.455 0.00 0.00 44.79 1.82
22 23 3.366781 GGACTGAGCTGAAGGCAAATTTC 60.367 47.826 0.00 0.00 44.79 2.17
23 24 3.225104 ACTGAGCTGAAGGCAAATTTCA 58.775 40.909 0.00 0.00 44.79 2.69
24 25 3.830755 ACTGAGCTGAAGGCAAATTTCAT 59.169 39.130 0.00 0.00 44.79 2.57
25 26 4.082354 ACTGAGCTGAAGGCAAATTTCATC 60.082 41.667 0.00 0.00 44.79 2.92
26 27 3.194116 TGAGCTGAAGGCAAATTTCATCC 59.806 43.478 0.00 0.00 44.79 3.51
27 28 3.438183 AGCTGAAGGCAAATTTCATCCT 58.562 40.909 0.00 0.00 44.79 3.24
28 29 4.603131 AGCTGAAGGCAAATTTCATCCTA 58.397 39.130 4.20 0.00 44.79 2.94
356 357 0.825410 AAAAACAACCAACCGGGACC 59.175 50.000 6.32 0.00 41.15 4.46
357 358 0.324460 AAAACAACCAACCGGGACCA 60.324 50.000 6.32 0.00 41.15 4.02
358 359 0.324460 AAACAACCAACCGGGACCAA 60.324 50.000 6.32 0.00 41.15 3.67
359 360 0.324460 AACAACCAACCGGGACCAAA 60.324 50.000 6.32 0.00 41.15 3.28
360 361 0.753848 ACAACCAACCGGGACCAAAG 60.754 55.000 6.32 0.00 41.15 2.77
361 362 1.152631 AACCAACCGGGACCAAAGG 60.153 57.895 6.32 0.00 41.15 3.11
362 363 2.989253 CCAACCGGGACCAAAGGC 60.989 66.667 6.32 0.00 40.01 4.35
363 364 2.989253 CAACCGGGACCAAAGGCC 60.989 66.667 6.32 0.00 0.00 5.19
364 365 4.295199 AACCGGGACCAAAGGCCC 62.295 66.667 6.32 0.00 36.26 5.80
366 367 4.426313 CCGGGACCAAAGGCCCTC 62.426 72.222 0.00 0.00 37.05 4.30
367 368 4.426313 CGGGACCAAAGGCCCTCC 62.426 72.222 0.00 0.00 37.05 4.30
369 370 2.356667 GGACCAAAGGCCCTCCTG 59.643 66.667 0.00 0.00 43.40 3.86
370 371 2.361737 GACCAAAGGCCCTCCTGC 60.362 66.667 0.00 0.00 43.40 4.85
378 379 3.555324 GCCCTCCTGCCTAGGCTC 61.555 72.222 33.07 7.42 44.22 4.70
379 380 3.230245 CCCTCCTGCCTAGGCTCG 61.230 72.222 33.07 22.98 44.22 5.03
380 381 3.230245 CCTCCTGCCTAGGCTCGG 61.230 72.222 33.07 29.74 44.22 4.63
407 408 3.050703 CCACGTAGGCACATCTGTC 57.949 57.895 0.00 0.00 0.00 3.51
408 409 0.460284 CCACGTAGGCACATCTGTCC 60.460 60.000 0.00 0.00 0.00 4.02
409 410 0.460284 CACGTAGGCACATCTGTCCC 60.460 60.000 0.00 0.00 0.00 4.46
410 411 1.226974 CGTAGGCACATCTGTCCCG 60.227 63.158 0.00 0.00 0.00 5.14
411 412 1.144057 GTAGGCACATCTGTCCCGG 59.856 63.158 0.00 0.00 0.00 5.73
412 413 1.305802 TAGGCACATCTGTCCCGGT 60.306 57.895 0.00 0.00 0.00 5.28
413 414 0.907704 TAGGCACATCTGTCCCGGTT 60.908 55.000 0.00 0.00 0.00 4.44
414 415 1.745489 GGCACATCTGTCCCGGTTC 60.745 63.158 0.00 0.00 0.00 3.62
415 416 1.003839 GCACATCTGTCCCGGTTCA 60.004 57.895 0.00 0.00 0.00 3.18
416 417 0.392998 GCACATCTGTCCCGGTTCAT 60.393 55.000 0.00 0.00 0.00 2.57
417 418 1.372582 CACATCTGTCCCGGTTCATG 58.627 55.000 0.00 0.00 0.00 3.07
418 419 0.984230 ACATCTGTCCCGGTTCATGT 59.016 50.000 0.00 0.00 0.00 3.21
419 420 1.351017 ACATCTGTCCCGGTTCATGTT 59.649 47.619 0.00 0.00 0.00 2.71
420 421 2.569853 ACATCTGTCCCGGTTCATGTTA 59.430 45.455 0.00 0.00 0.00 2.41
421 422 3.198068 CATCTGTCCCGGTTCATGTTAG 58.802 50.000 0.00 0.00 0.00 2.34
422 423 2.531771 TCTGTCCCGGTTCATGTTAGA 58.468 47.619 0.00 0.00 0.00 2.10
423 424 2.901192 TCTGTCCCGGTTCATGTTAGAA 59.099 45.455 0.00 0.00 0.00 2.10
424 425 3.000727 CTGTCCCGGTTCATGTTAGAAC 58.999 50.000 0.00 0.00 45.50 3.01
431 432 3.329929 GTTCATGTTAGAACCGGGACT 57.670 47.619 6.32 7.19 41.52 3.85
432 433 4.460948 GTTCATGTTAGAACCGGGACTA 57.539 45.455 6.32 6.06 41.52 2.59
433 434 4.824289 GTTCATGTTAGAACCGGGACTAA 58.176 43.478 6.32 12.25 41.52 2.24
434 435 5.240121 GTTCATGTTAGAACCGGGACTAAA 58.760 41.667 19.13 12.42 41.52 1.85
435 436 5.080969 TCATGTTAGAACCGGGACTAAAG 57.919 43.478 19.13 13.84 31.76 1.85
436 437 3.967332 TGTTAGAACCGGGACTAAAGG 57.033 47.619 19.13 0.00 31.76 3.11
437 438 2.568509 TGTTAGAACCGGGACTAAAGGG 59.431 50.000 19.13 0.00 31.76 3.95
438 439 1.870064 TAGAACCGGGACTAAAGGGG 58.130 55.000 6.32 0.00 0.00 4.79
439 440 0.912968 AGAACCGGGACTAAAGGGGG 60.913 60.000 6.32 0.00 0.00 5.40
454 455 3.700198 GGGGGAGGCATTAGTAACG 57.300 57.895 0.00 0.00 0.00 3.18
455 456 1.125633 GGGGGAGGCATTAGTAACGA 58.874 55.000 0.00 0.00 0.00 3.85
456 457 1.697982 GGGGGAGGCATTAGTAACGAT 59.302 52.381 0.00 0.00 0.00 3.73
457 458 2.289506 GGGGGAGGCATTAGTAACGATC 60.290 54.545 0.00 0.00 0.00 3.69
458 459 2.289506 GGGGAGGCATTAGTAACGATCC 60.290 54.545 0.00 0.00 0.00 3.36
459 460 2.633481 GGGAGGCATTAGTAACGATCCT 59.367 50.000 0.00 0.00 0.00 3.24
460 461 3.071167 GGGAGGCATTAGTAACGATCCTT 59.929 47.826 0.00 0.00 0.00 3.36
461 462 4.444449 GGGAGGCATTAGTAACGATCCTTT 60.444 45.833 0.00 0.00 0.00 3.11
462 463 5.221581 GGGAGGCATTAGTAACGATCCTTTA 60.222 44.000 0.00 0.00 0.00 1.85
463 464 5.927115 GGAGGCATTAGTAACGATCCTTTAG 59.073 44.000 0.00 0.00 0.00 1.85
464 465 6.462628 GGAGGCATTAGTAACGATCCTTTAGT 60.463 42.308 0.00 0.00 0.00 2.24
465 466 6.514063 AGGCATTAGTAACGATCCTTTAGTC 58.486 40.000 0.00 0.00 0.00 2.59
466 467 5.695363 GGCATTAGTAACGATCCTTTAGTCC 59.305 44.000 0.00 0.00 0.00 3.85
467 468 5.695363 GCATTAGTAACGATCCTTTAGTCCC 59.305 44.000 0.00 0.00 0.00 4.46
468 469 5.505173 TTAGTAACGATCCTTTAGTCCCG 57.495 43.478 0.00 0.00 0.00 5.14
469 470 2.692041 AGTAACGATCCTTTAGTCCCGG 59.308 50.000 0.00 0.00 0.00 5.73
470 471 1.565067 AACGATCCTTTAGTCCCGGT 58.435 50.000 0.00 0.00 0.00 5.28
471 472 1.565067 ACGATCCTTTAGTCCCGGTT 58.435 50.000 0.00 0.00 0.00 4.44
472 473 1.479730 ACGATCCTTTAGTCCCGGTTC 59.520 52.381 0.00 0.00 0.00 3.62
473 474 1.479323 CGATCCTTTAGTCCCGGTTCA 59.521 52.381 0.00 0.00 0.00 3.18
474 475 2.093869 CGATCCTTTAGTCCCGGTTCAA 60.094 50.000 0.00 0.00 0.00 2.69
475 476 3.532542 GATCCTTTAGTCCCGGTTCAAG 58.467 50.000 0.00 0.00 0.00 3.02
476 477 2.612000 TCCTTTAGTCCCGGTTCAAGA 58.388 47.619 0.00 0.00 0.00 3.02
477 478 2.974099 TCCTTTAGTCCCGGTTCAAGAA 59.026 45.455 0.00 0.00 0.00 2.52
478 479 3.072211 CCTTTAGTCCCGGTTCAAGAAC 58.928 50.000 0.00 4.39 40.45 3.01
490 491 4.744136 GTTCAAGAACCGGGACTAAAAG 57.256 45.455 6.32 0.00 35.36 2.27
491 492 2.774687 TCAAGAACCGGGACTAAAAGC 58.225 47.619 6.32 0.00 0.00 3.51
492 493 1.810755 CAAGAACCGGGACTAAAAGCC 59.189 52.381 6.32 0.00 0.00 4.35
493 494 0.327259 AGAACCGGGACTAAAAGCCC 59.673 55.000 6.32 0.00 41.11 5.19
494 495 0.327259 GAACCGGGACTAAAAGCCCT 59.673 55.000 6.32 0.00 42.40 5.19
495 496 0.775542 AACCGGGACTAAAAGCCCTT 59.224 50.000 6.32 0.00 42.40 3.95
496 497 1.660242 ACCGGGACTAAAAGCCCTTA 58.340 50.000 6.32 0.00 42.40 2.69
497 498 1.280133 ACCGGGACTAAAAGCCCTTAC 59.720 52.381 6.32 0.00 42.40 2.34
498 499 1.648504 CGGGACTAAAAGCCCTTACG 58.351 55.000 0.00 0.00 42.40 3.18
499 500 1.205417 CGGGACTAAAAGCCCTTACGA 59.795 52.381 0.00 0.00 42.40 3.43
500 501 2.354003 CGGGACTAAAAGCCCTTACGAA 60.354 50.000 0.00 0.00 42.40 3.85
501 502 3.005554 GGGACTAAAAGCCCTTACGAAC 58.994 50.000 0.00 0.00 41.31 3.95
502 503 3.005554 GGACTAAAAGCCCTTACGAACC 58.994 50.000 0.00 0.00 0.00 3.62
503 504 2.669924 GACTAAAAGCCCTTACGAACCG 59.330 50.000 0.00 0.00 0.00 4.44
504 505 2.004733 CTAAAAGCCCTTACGAACCGG 58.995 52.381 0.00 0.00 0.00 5.28
505 506 0.607217 AAAAGCCCTTACGAACCGGG 60.607 55.000 6.32 0.00 41.06 5.73
506 507 1.482748 AAAGCCCTTACGAACCGGGA 61.483 55.000 6.32 0.00 40.55 5.14
507 508 2.125391 GCCCTTACGAACCGGGAC 60.125 66.667 6.32 0.00 40.55 4.46
508 509 2.946346 GCCCTTACGAACCGGGACA 61.946 63.158 6.32 0.00 40.55 4.02
509 510 1.672898 CCCTTACGAACCGGGACAA 59.327 57.895 6.32 0.00 40.55 3.18
510 511 0.035176 CCCTTACGAACCGGGACAAA 59.965 55.000 6.32 0.00 40.55 2.83
511 512 1.339342 CCCTTACGAACCGGGACAAAT 60.339 52.381 6.32 0.00 40.55 2.32
512 513 1.735571 CCTTACGAACCGGGACAAATG 59.264 52.381 6.32 0.00 0.00 2.32
513 514 1.129811 CTTACGAACCGGGACAAATGC 59.870 52.381 6.32 0.00 0.00 3.56
514 515 0.674269 TACGAACCGGGACAAATGCC 60.674 55.000 6.32 0.00 0.00 4.40
515 516 1.969064 CGAACCGGGACAAATGCCA 60.969 57.895 6.32 0.00 35.61 4.92
516 517 1.312371 CGAACCGGGACAAATGCCAT 61.312 55.000 6.32 0.00 35.61 4.40
517 518 0.173255 GAACCGGGACAAATGCCATG 59.827 55.000 6.32 0.00 35.61 3.66
518 519 0.541764 AACCGGGACAAATGCCATGT 60.542 50.000 6.32 0.00 35.61 3.21
519 520 0.541764 ACCGGGACAAATGCCATGTT 60.542 50.000 6.32 0.00 35.61 2.71
520 521 0.607620 CCGGGACAAATGCCATGTTT 59.392 50.000 0.00 0.00 35.61 2.83
521 522 1.001860 CCGGGACAAATGCCATGTTTT 59.998 47.619 0.00 0.00 35.61 2.43
522 523 2.336667 CGGGACAAATGCCATGTTTTC 58.663 47.619 0.00 0.00 35.61 2.29
523 524 2.029110 CGGGACAAATGCCATGTTTTCT 60.029 45.455 0.00 0.00 35.61 2.52
524 525 3.192422 CGGGACAAATGCCATGTTTTCTA 59.808 43.478 0.00 0.00 35.61 2.10
525 526 4.494484 GGGACAAATGCCATGTTTTCTAC 58.506 43.478 0.00 0.00 36.03 2.59
526 527 4.220602 GGGACAAATGCCATGTTTTCTACT 59.779 41.667 0.00 0.00 36.03 2.57
527 528 5.417580 GGGACAAATGCCATGTTTTCTACTA 59.582 40.000 0.00 0.00 36.03 1.82
528 529 6.071616 GGGACAAATGCCATGTTTTCTACTAA 60.072 38.462 0.00 0.00 36.03 2.24
529 530 7.363793 GGGACAAATGCCATGTTTTCTACTAAT 60.364 37.037 0.00 0.00 36.03 1.73
530 531 7.489113 GGACAAATGCCATGTTTTCTACTAATG 59.511 37.037 0.00 0.00 0.00 1.90
531 532 7.322664 ACAAATGCCATGTTTTCTACTAATGG 58.677 34.615 0.00 0.00 0.00 3.16
532 533 6.469782 AATGCCATGTTTTCTACTAATGGG 57.530 37.500 0.00 0.00 0.00 4.00
533 534 3.699038 TGCCATGTTTTCTACTAATGGGC 59.301 43.478 0.00 0.00 38.16 5.36
534 535 3.699038 GCCATGTTTTCTACTAATGGGCA 59.301 43.478 0.00 0.00 37.62 5.36
535 536 4.159506 GCCATGTTTTCTACTAATGGGCAA 59.840 41.667 0.00 0.00 37.62 4.52
536 537 5.163416 GCCATGTTTTCTACTAATGGGCAAT 60.163 40.000 0.00 0.00 37.62 3.56
537 538 6.275335 CCATGTTTTCTACTAATGGGCAATG 58.725 40.000 0.00 0.00 0.00 2.82
538 539 5.323371 TGTTTTCTACTAATGGGCAATGC 57.677 39.130 0.00 0.00 0.00 3.56
548 549 2.568090 GGCAATGCCGTCACTTGG 59.432 61.111 9.14 0.00 39.62 3.61
549 550 1.971167 GGCAATGCCGTCACTTGGA 60.971 57.895 9.14 0.00 39.62 3.53
550 551 1.523154 GGCAATGCCGTCACTTGGAA 61.523 55.000 9.14 0.00 39.62 3.53
551 552 0.109597 GCAATGCCGTCACTTGGAAG 60.110 55.000 0.00 0.00 0.00 3.46
552 553 1.522668 CAATGCCGTCACTTGGAAGA 58.477 50.000 0.00 0.00 0.00 2.87
553 554 2.086869 CAATGCCGTCACTTGGAAGAT 58.913 47.619 0.00 0.00 0.00 2.40
554 555 2.029838 ATGCCGTCACTTGGAAGATC 57.970 50.000 0.00 0.00 0.00 2.75
555 556 0.036388 TGCCGTCACTTGGAAGATCC 60.036 55.000 0.00 0.00 36.96 3.36
556 557 0.744771 GCCGTCACTTGGAAGATCCC 60.745 60.000 0.00 0.00 35.03 3.85
557 558 0.460284 CCGTCACTTGGAAGATCCCG 60.460 60.000 0.00 0.00 35.03 5.14
558 559 1.084370 CGTCACTTGGAAGATCCCGC 61.084 60.000 0.00 0.00 35.03 6.13
559 560 0.036388 GTCACTTGGAAGATCCCGCA 60.036 55.000 0.00 0.00 35.03 5.69
560 561 0.690192 TCACTTGGAAGATCCCGCAA 59.310 50.000 0.00 0.00 35.03 4.85
561 562 0.804989 CACTTGGAAGATCCCGCAAC 59.195 55.000 0.00 0.00 35.03 4.17
562 563 0.693049 ACTTGGAAGATCCCGCAACT 59.307 50.000 0.00 0.00 35.03 3.16
563 564 1.089920 CTTGGAAGATCCCGCAACTG 58.910 55.000 0.00 0.00 35.03 3.16
564 565 0.400213 TTGGAAGATCCCGCAACTGT 59.600 50.000 0.00 0.00 35.03 3.55
565 566 0.321564 TGGAAGATCCCGCAACTGTG 60.322 55.000 0.00 0.00 35.03 3.66
566 567 0.036388 GGAAGATCCCGCAACTGTGA 60.036 55.000 0.00 0.00 0.00 3.58
567 568 1.079503 GAAGATCCCGCAACTGTGAC 58.920 55.000 0.00 0.00 0.00 3.67
568 569 0.396435 AAGATCCCGCAACTGTGACA 59.604 50.000 0.00 0.00 0.00 3.58
569 570 0.615331 AGATCCCGCAACTGTGACAT 59.385 50.000 0.00 0.00 0.00 3.06
570 571 0.729116 GATCCCGCAACTGTGACATG 59.271 55.000 0.00 0.00 0.00 3.21
571 572 1.308069 ATCCCGCAACTGTGACATGC 61.308 55.000 1.22 1.22 36.74 4.06
572 573 1.968017 CCCGCAACTGTGACATGCT 60.968 57.895 9.21 0.00 37.92 3.79
573 574 1.499056 CCGCAACTGTGACATGCTC 59.501 57.895 9.21 0.00 37.92 4.26
574 575 0.952497 CCGCAACTGTGACATGCTCT 60.952 55.000 9.21 0.00 37.92 4.09
575 576 0.441533 CGCAACTGTGACATGCTCTC 59.558 55.000 9.21 0.00 37.92 3.20
576 577 1.516161 GCAACTGTGACATGCTCTCA 58.484 50.000 4.04 0.00 37.12 3.27
577 578 2.082231 GCAACTGTGACATGCTCTCAT 58.918 47.619 4.04 0.00 37.12 2.90
578 579 2.486982 GCAACTGTGACATGCTCTCATT 59.513 45.455 4.04 0.00 37.12 2.57
579 580 3.669824 GCAACTGTGACATGCTCTCATTG 60.670 47.826 4.04 5.73 37.12 2.82
580 581 3.413846 ACTGTGACATGCTCTCATTGT 57.586 42.857 0.00 0.00 0.00 2.71
581 582 4.541973 ACTGTGACATGCTCTCATTGTA 57.458 40.909 0.00 0.00 0.00 2.41
582 583 4.248859 ACTGTGACATGCTCTCATTGTAC 58.751 43.478 0.00 0.00 0.00 2.90
583 584 3.599343 TGTGACATGCTCTCATTGTACC 58.401 45.455 0.00 0.00 0.00 3.34
584 585 2.604914 GTGACATGCTCTCATTGTACCG 59.395 50.000 0.00 0.00 0.00 4.02
585 586 2.495669 TGACATGCTCTCATTGTACCGA 59.504 45.455 0.00 0.00 0.00 4.69
586 587 2.860735 GACATGCTCTCATTGTACCGAC 59.139 50.000 0.00 0.00 0.00 4.79
587 588 2.233676 ACATGCTCTCATTGTACCGACA 59.766 45.455 0.00 0.00 0.00 4.35
588 589 2.363788 TGCTCTCATTGTACCGACAC 57.636 50.000 0.00 0.00 34.48 3.67
589 590 1.067142 TGCTCTCATTGTACCGACACC 60.067 52.381 0.00 0.00 34.48 4.16
590 591 1.909376 CTCTCATTGTACCGACACCG 58.091 55.000 0.00 0.00 34.48 4.94
591 592 1.471287 CTCTCATTGTACCGACACCGA 59.529 52.381 0.00 0.00 38.22 4.69
592 593 1.200716 TCTCATTGTACCGACACCGAC 59.799 52.381 0.00 0.00 38.22 4.79
593 594 0.960286 TCATTGTACCGACACCGACA 59.040 50.000 0.00 0.00 38.22 4.35
594 595 1.546923 TCATTGTACCGACACCGACAT 59.453 47.619 0.00 0.00 38.22 3.06
595 596 1.658596 CATTGTACCGACACCGACATG 59.341 52.381 0.00 0.00 38.22 3.21
596 597 0.038067 TTGTACCGACACCGACATGG 60.038 55.000 0.00 0.00 46.41 3.66
597 598 1.808390 GTACCGACACCGACATGGC 60.808 63.158 0.00 0.00 43.94 4.40
598 599 1.980232 TACCGACACCGACATGGCT 60.980 57.895 0.00 0.00 43.94 4.75
599 600 2.220615 TACCGACACCGACATGGCTG 62.221 60.000 0.00 0.00 43.94 4.85
600 601 2.261361 CGACACCGACATGGCTGA 59.739 61.111 0.00 0.00 43.94 4.26
601 602 1.807165 CGACACCGACATGGCTGAG 60.807 63.158 0.00 0.00 43.94 3.35
602 603 2.046892 ACACCGACATGGCTGAGC 60.047 61.111 0.00 0.00 43.94 4.26
603 604 2.267006 CACCGACATGGCTGAGCT 59.733 61.111 3.72 0.00 43.94 4.09
604 605 2.104859 CACCGACATGGCTGAGCTG 61.105 63.158 3.72 0.00 43.94 4.24
605 606 2.267006 CCGACATGGCTGAGCTGT 59.733 61.111 3.72 0.81 0.00 4.40
606 607 2.104859 CCGACATGGCTGAGCTGTG 61.105 63.158 3.72 6.23 0.00 3.66
607 608 1.079612 CGACATGGCTGAGCTGTGA 60.080 57.895 14.53 0.00 0.00 3.58
608 609 0.671472 CGACATGGCTGAGCTGTGAA 60.671 55.000 14.53 0.00 0.00 3.18
609 610 1.085091 GACATGGCTGAGCTGTGAAG 58.915 55.000 14.53 0.00 0.00 3.02
610 611 0.322277 ACATGGCTGAGCTGTGAAGG 60.322 55.000 14.53 0.00 0.00 3.46
611 612 0.035725 CATGGCTGAGCTGTGAAGGA 60.036 55.000 3.72 0.00 0.00 3.36
612 613 0.252479 ATGGCTGAGCTGTGAAGGAG 59.748 55.000 3.72 0.00 0.00 3.69
613 614 0.833409 TGGCTGAGCTGTGAAGGAGA 60.833 55.000 3.72 0.00 0.00 3.71
614 615 0.322975 GGCTGAGCTGTGAAGGAGAA 59.677 55.000 3.72 0.00 0.00 2.87
615 616 1.271054 GGCTGAGCTGTGAAGGAGAAA 60.271 52.381 3.72 0.00 0.00 2.52
616 617 1.803555 GCTGAGCTGTGAAGGAGAAAC 59.196 52.381 0.00 0.00 0.00 2.78
617 618 2.549778 GCTGAGCTGTGAAGGAGAAACT 60.550 50.000 0.00 0.00 0.00 2.66
618 619 3.306364 GCTGAGCTGTGAAGGAGAAACTA 60.306 47.826 0.00 0.00 0.00 2.24
619 620 4.800914 GCTGAGCTGTGAAGGAGAAACTAA 60.801 45.833 0.00 0.00 0.00 2.24
620 621 4.887748 TGAGCTGTGAAGGAGAAACTAAG 58.112 43.478 0.00 0.00 0.00 2.18
621 622 4.588951 TGAGCTGTGAAGGAGAAACTAAGA 59.411 41.667 0.00 0.00 0.00 2.10
622 623 5.146010 AGCTGTGAAGGAGAAACTAAGAG 57.854 43.478 0.00 0.00 0.00 2.85
623 624 4.835615 AGCTGTGAAGGAGAAACTAAGAGA 59.164 41.667 0.00 0.00 0.00 3.10
624 625 5.483583 AGCTGTGAAGGAGAAACTAAGAGAT 59.516 40.000 0.00 0.00 0.00 2.75
625 626 5.580297 GCTGTGAAGGAGAAACTAAGAGATG 59.420 44.000 0.00 0.00 0.00 2.90
626 627 5.482908 TGTGAAGGAGAAACTAAGAGATGC 58.517 41.667 0.00 0.00 0.00 3.91
627 628 4.873259 GTGAAGGAGAAACTAAGAGATGCC 59.127 45.833 0.00 0.00 0.00 4.40
628 629 4.532126 TGAAGGAGAAACTAAGAGATGCCA 59.468 41.667 0.00 0.00 0.00 4.92
629 630 5.013079 TGAAGGAGAAACTAAGAGATGCCAA 59.987 40.000 0.00 0.00 0.00 4.52
630 631 5.096443 AGGAGAAACTAAGAGATGCCAAG 57.904 43.478 0.00 0.00 0.00 3.61
631 632 4.080638 AGGAGAAACTAAGAGATGCCAAGG 60.081 45.833 0.00 0.00 0.00 3.61
632 633 4.323868 GGAGAAACTAAGAGATGCCAAGGT 60.324 45.833 0.00 0.00 0.00 3.50
633 634 4.583871 AGAAACTAAGAGATGCCAAGGTG 58.416 43.478 0.00 0.00 0.00 4.00
634 635 4.287067 AGAAACTAAGAGATGCCAAGGTGA 59.713 41.667 0.00 0.00 0.00 4.02
635 636 4.640771 AACTAAGAGATGCCAAGGTGAA 57.359 40.909 0.00 0.00 0.00 3.18
636 637 3.944087 ACTAAGAGATGCCAAGGTGAAC 58.056 45.455 0.00 0.00 0.00 3.18
637 638 2.206576 AAGAGATGCCAAGGTGAACC 57.793 50.000 0.00 0.00 0.00 3.62
638 639 1.067295 AGAGATGCCAAGGTGAACCA 58.933 50.000 1.62 0.00 38.89 3.67
639 640 1.004044 AGAGATGCCAAGGTGAACCAG 59.996 52.381 1.62 0.00 38.89 4.00
640 641 0.610232 AGATGCCAAGGTGAACCAGC 60.610 55.000 1.62 2.47 38.89 4.85
641 642 0.895100 GATGCCAAGGTGAACCAGCA 60.895 55.000 12.42 12.42 41.04 4.41
642 643 0.469705 ATGCCAAGGTGAACCAGCAA 60.470 50.000 13.60 1.74 40.48 3.91
643 644 0.685785 TGCCAAGGTGAACCAGCAAA 60.686 50.000 8.80 0.00 36.37 3.68
644 645 0.032540 GCCAAGGTGAACCAGCAAAG 59.967 55.000 1.62 0.00 38.89 2.77
645 646 0.675633 CCAAGGTGAACCAGCAAAGG 59.324 55.000 1.62 0.00 38.89 3.11
646 647 1.691196 CAAGGTGAACCAGCAAAGGA 58.309 50.000 1.62 0.00 38.89 3.36
647 648 1.338020 CAAGGTGAACCAGCAAAGGAC 59.662 52.381 1.62 0.00 38.89 3.85
648 649 0.550914 AGGTGAACCAGCAAAGGACA 59.449 50.000 1.62 0.00 38.89 4.02
649 650 1.145738 AGGTGAACCAGCAAAGGACAT 59.854 47.619 1.62 0.00 38.89 3.06
650 651 1.270550 GGTGAACCAGCAAAGGACATG 59.729 52.381 0.00 0.00 35.64 3.21
651 652 2.229792 GTGAACCAGCAAAGGACATGA 58.770 47.619 0.00 0.00 0.00 3.07
652 653 2.227388 GTGAACCAGCAAAGGACATGAG 59.773 50.000 0.00 0.00 0.00 2.90
653 654 1.815003 GAACCAGCAAAGGACATGAGG 59.185 52.381 0.00 0.00 0.00 3.86
654 655 1.067295 ACCAGCAAAGGACATGAGGA 58.933 50.000 0.00 0.00 0.00 3.71
655 656 1.004044 ACCAGCAAAGGACATGAGGAG 59.996 52.381 0.00 0.00 0.00 3.69
656 657 1.004044 CCAGCAAAGGACATGAGGAGT 59.996 52.381 0.00 0.00 0.00 3.85
657 658 2.553904 CCAGCAAAGGACATGAGGAGTT 60.554 50.000 0.00 0.00 0.00 3.01
658 659 3.152341 CAGCAAAGGACATGAGGAGTTT 58.848 45.455 0.00 0.00 0.00 2.66
659 660 3.190118 CAGCAAAGGACATGAGGAGTTTC 59.810 47.826 0.00 0.00 0.00 2.78
660 661 3.073650 AGCAAAGGACATGAGGAGTTTCT 59.926 43.478 0.00 0.00 0.00 2.52
661 662 3.438434 GCAAAGGACATGAGGAGTTTCTC 59.562 47.826 0.00 0.00 0.00 2.87
688 689 4.813296 TTTTCAAGAAAAGAGCGAGGTC 57.187 40.909 3.98 0.00 35.57 3.85
689 690 3.753294 TTCAAGAAAAGAGCGAGGTCT 57.247 42.857 0.00 0.00 0.00 3.85
690 691 3.032017 TCAAGAAAAGAGCGAGGTCTG 57.968 47.619 5.52 0.00 0.00 3.51
691 692 2.628178 TCAAGAAAAGAGCGAGGTCTGA 59.372 45.455 5.52 0.00 0.00 3.27
703 704 6.322712 AGAGCGAGGTCTGAAGTAGATATTTT 59.677 38.462 3.82 0.00 37.83 1.82
706 707 6.419413 GCGAGGTCTGAAGTAGATATTTTGAG 59.581 42.308 0.00 0.00 37.83 3.02
739 740 8.293699 ACAAAATAACAAGAATATCTGGGACC 57.706 34.615 0.00 0.00 0.00 4.46
762 763 9.163899 GACCCCAAAAGTTGTTAAAATTACAAA 57.836 29.630 0.00 0.00 37.26 2.83
849 862 9.967346 GGCTAAGGAAACTCATAAAATAAATCC 57.033 33.333 0.00 0.00 42.68 3.01
864 877 2.029838 AATCCAAGCAGAGCCTAACG 57.970 50.000 0.00 0.00 0.00 3.18
979 1019 0.037975 GCTCGGTCGTGGTTTCCTTA 60.038 55.000 0.00 0.00 0.00 2.69
982 1022 0.319405 CGGTCGTGGTTTCCTTACCT 59.681 55.000 0.00 0.00 39.04 3.08
985 1025 2.612221 GGTCGTGGTTTCCTTACCTCTG 60.612 54.545 0.00 0.00 39.04 3.35
1078 1121 1.233019 TGAGCAGCTGTTGAAGAAGC 58.767 50.000 16.64 0.00 39.82 3.86
1228 1271 1.141053 TCGATCCCAGACTCGATCTCA 59.859 52.381 7.24 0.00 38.86 3.27
1250 1293 4.832608 GGAGTGTAAGCCCCCGCG 62.833 72.222 0.00 0.00 41.18 6.46
1272 1315 1.299648 CCCAACCGATTCTCCTGCA 59.700 57.895 0.00 0.00 0.00 4.41
1296 1342 2.709999 GCTGTTGATTGCGCGTTGC 61.710 57.895 8.43 0.00 46.70 4.17
1302 1348 3.267597 GATTGCGCGTTGCCAACCT 62.268 57.895 8.43 0.00 45.60 3.50
1324 1370 3.428282 GGGCGCTTTGTACCGGTG 61.428 66.667 19.93 0.00 0.00 4.94
1337 1383 2.785713 ACCGGTGTAATTTTGCACAC 57.214 45.000 6.12 1.30 44.20 3.82
1343 1389 4.429108 GGTGTAATTTTGCACACAACACT 58.571 39.130 12.51 0.00 45.49 3.55
1344 1390 5.583495 GGTGTAATTTTGCACACAACACTA 58.417 37.500 12.51 0.00 45.49 2.74
1345 1391 6.037098 GGTGTAATTTTGCACACAACACTAA 58.963 36.000 12.51 0.00 45.49 2.24
1346 1392 6.699642 GGTGTAATTTTGCACACAACACTAAT 59.300 34.615 12.51 0.00 45.49 1.73
1354 1400 9.891828 TTTTGCACACAACACTAATAATTCTAG 57.108 29.630 0.00 0.00 34.87 2.43
1355 1401 7.072177 TGCACACAACACTAATAATTCTAGC 57.928 36.000 0.00 0.00 0.00 3.42
1357 1403 7.336679 TGCACACAACACTAATAATTCTAGCAT 59.663 33.333 0.00 0.00 0.00 3.79
1358 1404 7.641411 GCACACAACACTAATAATTCTAGCATG 59.359 37.037 0.00 0.00 0.00 4.06
1359 1405 8.124823 CACACAACACTAATAATTCTAGCATGG 58.875 37.037 0.00 0.00 0.00 3.66
1376 1424 3.311322 GCATGGTATTGCGCTTTGTACTA 59.689 43.478 9.73 4.86 32.06 1.82
1383 1431 2.942710 TGCGCTTTGTACTAGTGAGTC 58.057 47.619 9.73 0.00 37.10 3.36
1384 1432 2.260481 GCGCTTTGTACTAGTGAGTCC 58.740 52.381 5.39 0.00 37.10 3.85
1421 1475 5.710984 TCAGAAACTCGCTTAAAGGAGTAG 58.289 41.667 8.13 1.82 42.42 2.57
1423 1477 6.432162 TCAGAAACTCGCTTAAAGGAGTAGTA 59.568 38.462 8.13 0.00 42.42 1.82
1429 1483 5.696822 TCGCTTAAAGGAGTAGTATATGCG 58.303 41.667 0.00 0.00 39.80 4.73
1431 1485 5.342525 CGCTTAAAGGAGTAGTATATGCGTG 59.657 44.000 0.00 0.00 36.20 5.34
1443 1497 1.466856 TATGCGTGGTCGAGTTACCT 58.533 50.000 0.00 0.00 40.44 3.08
1455 1548 2.572290 GAGTTACCTGGTTGCACAACT 58.428 47.619 3.84 8.23 40.94 3.16
1461 1554 2.851263 CTGGTTGCACAACTAGGGTA 57.149 50.000 16.57 0.00 43.47 3.69
1464 1557 2.440253 TGGTTGCACAACTAGGGTAAGT 59.560 45.455 12.87 0.00 40.94 2.24
1467 1560 4.261447 GGTTGCACAACTAGGGTAAGTTTG 60.261 45.833 12.87 0.00 37.61 2.93
1468 1561 2.882137 TGCACAACTAGGGTAAGTTTGC 59.118 45.455 12.67 12.67 40.25 3.68
1469 1562 2.882137 GCACAACTAGGGTAAGTTTGCA 59.118 45.455 13.78 0.00 39.96 4.08
1470 1563 3.058224 GCACAACTAGGGTAAGTTTGCAG 60.058 47.826 13.78 0.00 39.96 4.41
1471 1564 3.058224 CACAACTAGGGTAAGTTTGCAGC 60.058 47.826 0.00 0.00 37.61 5.25
1472 1565 2.488153 CAACTAGGGTAAGTTTGCAGCC 59.512 50.000 0.00 0.00 37.61 4.85
1504 1611 1.114722 CCTGCTGGCCTTTTCAACCA 61.115 55.000 3.32 0.00 0.00 3.67
1517 1628 6.071616 GCCTTTTCAACCATGATAACTTACCA 60.072 38.462 0.00 0.00 34.96 3.25
1545 1656 3.330405 TCCACCATCCAGTTCATTCTTGA 59.670 43.478 0.00 0.00 0.00 3.02
1547 1658 4.523943 CCACCATCCAGTTCATTCTTGAAA 59.476 41.667 0.00 0.00 43.29 2.69
1565 1676 9.872757 TTCTTGAAATTTGTAACGCTAGTAAAG 57.127 29.630 0.00 0.00 0.00 1.85
1593 1780 1.263217 CAACGTAAAGAGCACCACACC 59.737 52.381 0.00 0.00 0.00 4.16
1602 1789 3.766545 AGAGCACCACACCAATACAATT 58.233 40.909 0.00 0.00 0.00 2.32
1611 1798 6.027131 CCACACCAATACAATTCATGTTACG 58.973 40.000 0.00 0.00 43.63 3.18
1622 1809 4.678509 TTCATGTTACGCCATTCAACTC 57.321 40.909 0.00 0.00 0.00 3.01
1625 1812 5.483811 TCATGTTACGCCATTCAACTCTTA 58.516 37.500 0.00 0.00 0.00 2.10
1627 1814 3.998341 TGTTACGCCATTCAACTCTTACC 59.002 43.478 0.00 0.00 0.00 2.85
1628 1815 4.251268 GTTACGCCATTCAACTCTTACCT 58.749 43.478 0.00 0.00 0.00 3.08
1629 1816 2.699954 ACGCCATTCAACTCTTACCTG 58.300 47.619 0.00 0.00 0.00 4.00
1632 1819 3.125316 CGCCATTCAACTCTTACCTGTTC 59.875 47.826 0.00 0.00 0.00 3.18
1633 1820 4.327680 GCCATTCAACTCTTACCTGTTCT 58.672 43.478 0.00 0.00 0.00 3.01
1636 1823 7.272978 GCCATTCAACTCTTACCTGTTCTATA 58.727 38.462 0.00 0.00 0.00 1.31
1640 1827 9.892130 ATTCAACTCTTACCTGTTCTATAAAGG 57.108 33.333 0.00 0.00 37.11 3.11
1642 1829 8.529476 TCAACTCTTACCTGTTCTATAAAGGAC 58.471 37.037 0.00 0.00 34.97 3.85
1643 1830 8.311836 CAACTCTTACCTGTTCTATAAAGGACA 58.688 37.037 0.00 0.00 39.02 4.02
1652 1839 5.046591 TGTTCTATAAAGGACAGACCCAGTG 60.047 44.000 0.00 0.00 36.23 3.66
1653 1840 2.789409 ATAAAGGACAGACCCAGTGC 57.211 50.000 0.00 0.00 40.05 4.40
1655 1842 0.773644 AAAGGACAGACCCAGTGCAT 59.226 50.000 0.00 0.00 40.05 3.96
1656 1843 1.656587 AAGGACAGACCCAGTGCATA 58.343 50.000 0.00 0.00 40.05 3.14
1657 1844 1.198713 AGGACAGACCCAGTGCATAG 58.801 55.000 0.00 0.00 40.05 2.23
1658 1845 1.195115 GGACAGACCCAGTGCATAGA 58.805 55.000 0.00 0.00 0.00 1.98
1659 1846 1.555075 GGACAGACCCAGTGCATAGAA 59.445 52.381 0.00 0.00 0.00 2.10
1661 1848 1.065854 ACAGACCCAGTGCATAGAAGC 60.066 52.381 0.00 0.00 0.00 3.86
1663 1850 1.484240 AGACCCAGTGCATAGAAGCTC 59.516 52.381 0.00 0.00 34.99 4.09
1665 1852 0.179034 CCCAGTGCATAGAAGCTCCC 60.179 60.000 0.00 0.00 34.99 4.30
1667 1854 1.661341 CAGTGCATAGAAGCTCCCAC 58.339 55.000 0.00 0.00 34.99 4.61
1668 1855 1.065926 CAGTGCATAGAAGCTCCCACA 60.066 52.381 0.00 0.00 34.99 4.17
1669 1856 1.065854 AGTGCATAGAAGCTCCCACAC 60.066 52.381 0.00 0.00 34.99 3.82
1670 1857 0.983467 TGCATAGAAGCTCCCACACA 59.017 50.000 0.00 0.00 34.99 3.72
1671 1858 1.350684 TGCATAGAAGCTCCCACACAA 59.649 47.619 0.00 0.00 34.99 3.33
1672 1859 2.012673 GCATAGAAGCTCCCACACAAG 58.987 52.381 0.00 0.00 0.00 3.16
1673 1860 2.636830 CATAGAAGCTCCCACACAAGG 58.363 52.381 0.00 0.00 0.00 3.61
1684 1871 1.075600 ACACAAGGTGGGGTTTGGG 60.076 57.895 1.07 0.00 37.94 4.12
1685 1872 1.836604 CACAAGGTGGGGTTTGGGG 60.837 63.158 0.00 0.00 0.00 4.96
1686 1873 2.015726 ACAAGGTGGGGTTTGGGGA 61.016 57.895 0.00 0.00 0.00 4.81
1687 1874 1.228862 CAAGGTGGGGTTTGGGGAG 60.229 63.158 0.00 0.00 0.00 4.30
1688 1875 2.478803 AAGGTGGGGTTTGGGGAGG 61.479 63.158 0.00 0.00 0.00 4.30
1689 1876 3.992641 GGTGGGGTTTGGGGAGGG 61.993 72.222 0.00 0.00 0.00 4.30
1690 1877 2.861974 GTGGGGTTTGGGGAGGGA 60.862 66.667 0.00 0.00 0.00 4.20
1693 1880 0.178798 TGGGGTTTGGGGAGGGATTA 60.179 55.000 0.00 0.00 0.00 1.75
1695 1882 2.295294 TGGGGTTTGGGGAGGGATTATA 60.295 50.000 0.00 0.00 0.00 0.98
1696 1883 2.378886 GGGGTTTGGGGAGGGATTATAG 59.621 54.545 0.00 0.00 0.00 1.31
1697 1884 2.378886 GGGTTTGGGGAGGGATTATAGG 59.621 54.545 0.00 0.00 0.00 2.57
1698 1885 3.332968 GGTTTGGGGAGGGATTATAGGA 58.667 50.000 0.00 0.00 0.00 2.94
1699 1886 3.725267 GGTTTGGGGAGGGATTATAGGAA 59.275 47.826 0.00 0.00 0.00 3.36
1700 1887 4.447325 GGTTTGGGGAGGGATTATAGGAAC 60.447 50.000 0.00 0.00 0.00 3.62
1701 1888 2.999928 TGGGGAGGGATTATAGGAACC 58.000 52.381 0.00 0.00 0.00 3.62
1702 1889 2.531463 TGGGGAGGGATTATAGGAACCT 59.469 50.000 0.00 0.00 0.00 3.50
1703 1890 3.741438 TGGGGAGGGATTATAGGAACCTA 59.259 47.826 2.93 2.93 0.00 3.08
1704 1891 4.202901 TGGGGAGGGATTATAGGAACCTAG 60.203 50.000 6.72 0.00 31.45 3.02
1705 1892 4.202912 GGGGAGGGATTATAGGAACCTAGT 60.203 50.000 6.72 0.00 31.45 2.57
1706 1893 5.024785 GGGAGGGATTATAGGAACCTAGTC 58.975 50.000 6.72 4.93 31.45 2.59
1707 1894 5.222589 GGGAGGGATTATAGGAACCTAGTCT 60.223 48.000 6.72 0.00 31.45 3.24
1708 1895 6.324544 GGAGGGATTATAGGAACCTAGTCTT 58.675 44.000 6.72 0.00 31.45 3.01
1709 1896 7.477008 GGAGGGATTATAGGAACCTAGTCTTA 58.523 42.308 6.72 0.00 31.45 2.10
1710 1897 7.396907 GGAGGGATTATAGGAACCTAGTCTTAC 59.603 44.444 6.72 0.00 31.45 2.34
1711 1898 7.247500 AGGGATTATAGGAACCTAGTCTTACC 58.753 42.308 6.72 4.95 31.45 2.85
1712 1899 6.440010 GGGATTATAGGAACCTAGTCTTACCC 59.560 46.154 6.72 9.62 31.45 3.69
1713 1900 6.440010 GGATTATAGGAACCTAGTCTTACCCC 59.560 46.154 6.72 0.00 31.45 4.95
1714 1901 6.618836 TTATAGGAACCTAGTCTTACCCCT 57.381 41.667 6.72 0.00 31.45 4.79
1715 1902 3.117552 AGGAACCTAGTCTTACCCCTG 57.882 52.381 0.00 0.00 0.00 4.45
1716 1903 1.485480 GGAACCTAGTCTTACCCCTGC 59.515 57.143 0.00 0.00 0.00 4.85
1717 1904 2.185387 GAACCTAGTCTTACCCCTGCA 58.815 52.381 0.00 0.00 0.00 4.41
1718 1905 2.337359 ACCTAGTCTTACCCCTGCAA 57.663 50.000 0.00 0.00 0.00 4.08
1719 1906 2.627933 ACCTAGTCTTACCCCTGCAAA 58.372 47.619 0.00 0.00 0.00 3.68
1720 1907 2.572104 ACCTAGTCTTACCCCTGCAAAG 59.428 50.000 0.00 0.00 0.00 2.77
1721 1908 2.572104 CCTAGTCTTACCCCTGCAAAGT 59.428 50.000 0.00 0.00 0.00 2.66
1722 1909 2.568623 AGTCTTACCCCTGCAAAGTG 57.431 50.000 0.00 0.00 0.00 3.16
1723 1910 0.881796 GTCTTACCCCTGCAAAGTGC 59.118 55.000 0.00 0.00 45.29 4.40
1734 1921 1.978542 GCAAAGTGCAATGCAGAGAG 58.021 50.000 8.73 0.33 44.26 3.20
1735 1922 1.402456 GCAAAGTGCAATGCAGAGAGG 60.402 52.381 8.73 0.00 44.26 3.69
1736 1923 0.886563 AAAGTGCAATGCAGAGAGGC 59.113 50.000 8.73 0.00 40.08 4.70
1737 1924 0.037877 AAGTGCAATGCAGAGAGGCT 59.962 50.000 8.73 0.00 40.08 4.58
1739 1926 1.378119 TGCAATGCAGAGAGGCTGG 60.378 57.895 2.72 0.00 45.03 4.85
1740 1927 1.378250 GCAATGCAGAGAGGCTGGT 60.378 57.895 0.00 0.00 45.03 4.00
1741 1928 0.964358 GCAATGCAGAGAGGCTGGTT 60.964 55.000 0.00 0.00 45.03 3.67
1742 1929 1.093159 CAATGCAGAGAGGCTGGTTC 58.907 55.000 0.00 0.00 45.03 3.62
1743 1930 0.392193 AATGCAGAGAGGCTGGTTCG 60.392 55.000 0.00 0.00 45.03 3.95
1744 1931 1.260538 ATGCAGAGAGGCTGGTTCGA 61.261 55.000 0.00 0.00 45.03 3.71
1745 1932 1.293498 GCAGAGAGGCTGGTTCGAA 59.707 57.895 0.00 0.00 45.03 3.71
1746 1933 1.016653 GCAGAGAGGCTGGTTCGAAC 61.017 60.000 20.14 20.14 45.03 3.95
1755 1942 3.479979 GGTTCGAACCCAGGACCT 58.520 61.111 33.02 0.00 43.43 3.85
1756 1943 1.295746 GGTTCGAACCCAGGACCTC 59.704 63.158 33.02 7.79 43.43 3.85
1757 1944 1.192803 GGTTCGAACCCAGGACCTCT 61.193 60.000 33.02 0.00 43.43 3.69
1758 1945 0.685660 GTTCGAACCCAGGACCTCTT 59.314 55.000 17.68 0.00 0.00 2.85
1759 1946 0.685097 TTCGAACCCAGGACCTCTTG 59.315 55.000 0.00 0.00 0.00 3.02
1760 1947 1.192146 TCGAACCCAGGACCTCTTGG 61.192 60.000 0.00 0.00 42.20 3.61
1761 1948 1.002011 GAACCCAGGACCTCTTGGC 60.002 63.158 0.00 0.00 41.31 4.52
1762 1949 1.774217 AACCCAGGACCTCTTGGCA 60.774 57.895 0.00 0.00 41.31 4.92
1763 1950 2.069165 AACCCAGGACCTCTTGGCAC 62.069 60.000 0.00 0.00 41.31 5.01
1764 1951 2.528818 CCCAGGACCTCTTGGCACA 61.529 63.158 0.00 0.00 41.31 4.57
1775 1962 2.449518 TGGCACAAGTGGGGAGGA 60.450 61.111 2.00 0.00 31.92 3.71
1776 1963 2.034221 GGCACAAGTGGGGAGGAC 59.966 66.667 2.00 0.00 0.00 3.85
1777 1964 2.529744 GGCACAAGTGGGGAGGACT 61.530 63.158 2.00 0.00 0.00 3.85
1778 1965 1.456287 GCACAAGTGGGGAGGACTT 59.544 57.895 2.00 0.00 33.82 3.01
1779 1966 0.606673 GCACAAGTGGGGAGGACTTC 60.607 60.000 2.00 0.00 31.05 3.01
1780 1967 0.764890 CACAAGTGGGGAGGACTTCA 59.235 55.000 0.00 0.00 31.05 3.02
1781 1968 0.765510 ACAAGTGGGGAGGACTTCAC 59.234 55.000 0.00 0.00 31.05 3.18
1787 1974 1.003233 GGGAGGACTTCACCACTGC 60.003 63.158 0.00 0.00 0.00 4.40
1788 1975 1.374758 GGAGGACTTCACCACTGCG 60.375 63.158 0.00 0.00 0.00 5.18
1789 1976 2.029844 GAGGACTTCACCACTGCGC 61.030 63.158 0.00 0.00 0.00 6.09
1790 1977 3.050275 GGACTTCACCACTGCGCC 61.050 66.667 4.18 0.00 0.00 6.53
1791 1978 2.280797 GACTTCACCACTGCGCCA 60.281 61.111 4.18 0.00 0.00 5.69
1792 1979 2.281070 ACTTCACCACTGCGCCAG 60.281 61.111 4.18 4.99 37.52 4.85
1793 1980 3.052082 CTTCACCACTGCGCCAGG 61.052 66.667 4.18 6.64 35.51 4.45
1806 1993 3.333219 CCAGGCCTGCCCTCTCAA 61.333 66.667 28.39 0.00 44.09 3.02
1807 1994 2.045536 CAGGCCTGCCCTCTCAAC 60.046 66.667 22.33 0.00 44.09 3.18
1808 1995 2.204059 AGGCCTGCCCTCTCAACT 60.204 61.111 3.11 0.00 41.21 3.16
1809 1996 2.270527 GGCCTGCCCTCTCAACTC 59.729 66.667 0.00 0.00 0.00 3.01
1816 2011 1.902508 TGCCCTCTCAACTCTTACCTG 59.097 52.381 0.00 0.00 0.00 4.00
1822 2017 5.659079 CCCTCTCAACTCTTACCTGTTCTAT 59.341 44.000 0.00 0.00 0.00 1.98
1831 2026 8.596781 ACTCTTACCTGTTCTATAGTGACAAT 57.403 34.615 11.12 6.81 0.00 2.71
1859 2054 7.920160 ATGATTGATTACACATGTACACACA 57.080 32.000 0.00 0.00 39.52 3.72
1861 2056 6.934083 TGATTGATTACACATGTACACACACT 59.066 34.615 0.00 0.00 37.54 3.55
1862 2057 6.779115 TTGATTACACATGTACACACACTC 57.221 37.500 0.00 0.00 37.54 3.51
1901 2097 7.988028 TGGATCCGTTCATTTTATACATGTGTA 59.012 33.333 9.11 2.80 34.67 2.90
1905 2101 9.168451 TCCGTTCATTTTATACATGTGTAATGT 57.832 29.630 14.84 5.31 33.76 2.71
1906 2102 9.220635 CCGTTCATTTTATACATGTGTAATGTG 57.779 33.333 14.84 15.16 33.76 3.21
1907 2103 9.767684 CGTTCATTTTATACATGTGTAATGTGT 57.232 29.630 14.84 1.01 33.76 3.72
1921 2117 8.035165 TGTGTAATGTGTTGGTATTCATGTAC 57.965 34.615 0.00 0.00 0.00 2.90
1922 2118 7.148557 TGTGTAATGTGTTGGTATTCATGTACG 60.149 37.037 0.00 0.00 0.00 3.67
1923 2119 6.874664 TGTAATGTGTTGGTATTCATGTACGT 59.125 34.615 0.00 0.00 0.00 3.57
1924 2120 8.033626 TGTAATGTGTTGGTATTCATGTACGTA 58.966 33.333 0.00 0.00 0.00 3.57
1931 2127 8.661257 TGTTGGTATTCATGTACGTATTGAAAG 58.339 33.333 20.75 2.35 33.45 2.62
2048 2246 8.729805 ATATTCTCTCAGTCAAGATTGTTTCC 57.270 34.615 0.00 0.00 0.00 3.13
2142 2340 1.226859 CTATTCCGGCGCGACAAGA 60.227 57.895 14.85 4.81 0.00 3.02
2144 2342 0.390078 TATTCCGGCGCGACAAGAAA 60.390 50.000 14.85 0.00 0.00 2.52
2155 2357 2.839474 CGACAAGAAAAATCGCCAGTC 58.161 47.619 0.00 0.00 0.00 3.51
2217 2534 4.220693 AGCCAATGCACTTCTATACACA 57.779 40.909 0.00 0.00 41.13 3.72
2229 2563 8.656849 GCACTTCTATACACATATAATTTCCCG 58.343 37.037 0.00 0.00 0.00 5.14
2237 2571 5.104444 ACACATATAATTTCCCGGTGGTGTA 60.104 40.000 0.00 0.00 34.36 2.90
2241 2575 3.443145 AATTTCCCGGTGGTGTATTCA 57.557 42.857 0.00 0.00 0.00 2.57
2242 2576 2.188062 TTTCCCGGTGGTGTATTCAC 57.812 50.000 0.00 0.00 43.19 3.18
2317 2652 6.542370 AGTGAATTCGTAATGGAGGGTTTATG 59.458 38.462 0.04 0.00 0.00 1.90
2334 2680 6.485313 GGGTTTATGATCGTCAATGGATTGTA 59.515 38.462 0.00 0.00 38.84 2.41
2483 2829 5.962433 TCTCTTTTATAACTGGACCGTCAG 58.038 41.667 0.00 0.00 40.40 3.51
2501 2953 6.696148 ACCGTCAGACAATTCTCGTATTTATC 59.304 38.462 0.41 0.00 0.00 1.75
2678 3132 5.945144 ACGTCCACCAAATACTATAAGGT 57.055 39.130 0.00 0.00 0.00 3.50
2795 3249 6.276832 AGAGTAGACAAAATGCATGCAAAT 57.723 33.333 26.68 14.23 0.00 2.32
2950 3418 7.639113 TGTACTTGTTTTGAAGGACAATTCT 57.361 32.000 0.00 0.00 42.69 2.40
3070 3945 3.328931 AGGATGAAAGACTCAGCAAAGGA 59.671 43.478 0.00 0.00 42.55 3.36
3091 3966 4.682778 AATGCTGCAGATTAATGGCATT 57.317 36.364 20.43 18.01 42.86 3.56
3093 3968 5.995565 ATGCTGCAGATTAATGGCATTAT 57.004 34.783 20.43 10.57 37.13 1.28
3135 4010 4.451900 GAATATGGGGTCGAAACAGACAT 58.548 43.478 0.00 0.00 42.62 3.06
3282 4159 5.869888 CCACCACTAGAGTTCTATGTGAAAC 59.130 44.000 14.71 0.00 36.30 2.78
3468 4345 2.557924 CAAAGCTCAACCTGTTATGCCA 59.442 45.455 0.00 0.00 0.00 4.92
3469 4346 2.119801 AGCTCAACCTGTTATGCCAG 57.880 50.000 0.00 0.00 0.00 4.85
3504 4381 6.542370 GGTGTGTGGTAACTATAAGATGCAAT 59.458 38.462 0.00 0.00 37.61 3.56
3521 4398 2.622942 GCAATTGAAGGTCACTTGGTCA 59.377 45.455 10.34 0.00 37.47 4.02
3558 4439 5.396485 TCCTGGTTTACTAGTTGTGGTAGA 58.604 41.667 0.00 0.00 0.00 2.59
3563 4444 5.811100 GGTTTACTAGTTGTGGTAGATCAGC 59.189 44.000 0.00 0.00 0.00 4.26
3580 4461 6.297582 AGATCAGCTTTTAGATCCTTGGATG 58.702 40.000 6.92 0.00 41.16 3.51
3586 4475 6.894103 AGCTTTTAGATCCTTGGATGATTTGT 59.106 34.615 6.92 0.00 0.00 2.83
3595 4484 4.037208 CCTTGGATGATTTGTAGCATCACC 59.963 45.833 0.00 0.00 46.52 4.02
3596 4485 4.233632 TGGATGATTTGTAGCATCACCA 57.766 40.909 0.00 0.00 46.52 4.17
3601 4490 3.053768 TGATTTGTAGCATCACCATGGGA 60.054 43.478 18.09 11.04 0.00 4.37
3624 4513 5.941948 AAAAAGGACGTCTTGGTAATGAG 57.058 39.130 16.46 0.00 35.55 2.90
3631 4520 5.056894 ACGTCTTGGTAATGAGTGTAGTC 57.943 43.478 0.00 0.00 0.00 2.59
3709 4599 7.013369 GGGACAATCCATAACTGGTAAGATTTC 59.987 40.741 0.00 2.71 43.61 2.17
3717 4607 5.438761 AACTGGTAAGATTTCTGTGCAAC 57.561 39.130 0.00 0.00 37.35 4.17
3731 4621 2.171659 TGTGCAACACCTTCTGTCCTAA 59.828 45.455 0.00 0.00 45.67 2.69
3743 4635 4.689612 TCTGTCCTAATACTTCCCATGC 57.310 45.455 0.00 0.00 0.00 4.06
3775 4667 3.438087 AGATTCGATTGTTTCAGCACTGG 59.562 43.478 0.00 0.00 0.00 4.00
3909 4801 6.017400 AGTTGCAGAAATAGGTCAACAATG 57.983 37.500 0.00 0.00 39.39 2.82
3950 4842 4.394729 ACCATACGAGAACCACATTTTGT 58.605 39.130 0.00 0.00 0.00 2.83
3952 4844 2.774439 ACGAGAACCACATTTTGTGC 57.226 45.000 2.09 0.00 46.51 4.57
3953 4845 2.297701 ACGAGAACCACATTTTGTGCT 58.702 42.857 2.09 0.00 46.51 4.40
3955 4847 3.243068 ACGAGAACCACATTTTGTGCTTC 60.243 43.478 7.34 7.34 46.51 3.86
3998 4891 7.509236 TGGGTGCAGGATACATTGTATATAT 57.491 36.000 9.27 0.00 41.41 0.86
4001 4894 8.705594 GGGTGCAGGATACATTGTATATATAGT 58.294 37.037 9.27 0.00 41.41 2.12
4025 4920 4.875536 ACGTATACAATTGCAAGCAGATGA 59.124 37.500 4.94 0.00 0.00 2.92
4029 4924 7.044510 CGTATACAATTGCAAGCAGATGAAAAG 60.045 37.037 4.94 1.53 0.00 2.27
4053 4948 1.976132 ATGCCTGTCTCCACATCGGG 61.976 60.000 0.00 0.00 34.36 5.14
4071 4971 4.335647 CGCCCTGTCTTGCCCAGT 62.336 66.667 0.00 0.00 0.00 4.00
4088 4988 5.045213 TGCCCAGTAGTTTCCATTCTTGATA 60.045 40.000 0.00 0.00 0.00 2.15
4135 5036 6.320418 TCTTGGACTAGTACGATAATGCTTGA 59.680 38.462 0.00 0.00 0.00 3.02
4186 5087 1.693606 TCTGCATTGGTCTGTCTGTGA 59.306 47.619 0.00 0.00 0.00 3.58
4216 5119 7.005296 CCATACTGGATACTTCCTACTACTGT 58.995 42.308 0.00 0.00 40.96 3.55
4221 5124 8.060075 ACTGGATACTTCCTACTACTGTTACAT 58.940 37.037 0.00 0.00 43.07 2.29
4222 5125 9.570468 CTGGATACTTCCTACTACTGTTACATA 57.430 37.037 0.00 0.00 43.07 2.29
4223 5126 9.347240 TGGATACTTCCTACTACTGTTACATAC 57.653 37.037 0.00 0.00 43.07 2.39
4224 5127 9.571816 GGATACTTCCTACTACTGTTACATACT 57.428 37.037 0.00 0.00 39.14 2.12
4226 5129 7.878547 ACTTCCTACTACTGTTACATACTCC 57.121 40.000 0.00 0.00 0.00 3.85
4322 5235 2.093288 GTCATTCTGCTGGTCCAGATGA 60.093 50.000 23.77 18.17 41.18 2.92
4400 5313 4.065088 GACCACATCAAGAAGCTTGTACA 58.935 43.478 2.10 0.00 0.00 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.831580 ATTTGCCTTCAGCTCAGTCC 58.168 50.000 0.00 0.00 44.23 3.85
1 2 3.254166 TGAAATTTGCCTTCAGCTCAGTC 59.746 43.478 0.00 0.00 44.23 3.51
2 3 3.225104 TGAAATTTGCCTTCAGCTCAGT 58.775 40.909 0.00 0.00 44.23 3.41
3 4 3.928727 TGAAATTTGCCTTCAGCTCAG 57.071 42.857 0.00 0.00 44.23 3.35
4 5 3.194116 GGATGAAATTTGCCTTCAGCTCA 59.806 43.478 0.00 0.00 44.23 4.26
5 6 3.446516 AGGATGAAATTTGCCTTCAGCTC 59.553 43.478 0.00 0.00 44.23 4.09
6 7 3.438183 AGGATGAAATTTGCCTTCAGCT 58.562 40.909 0.00 0.00 44.23 4.24
7 8 3.881937 AGGATGAAATTTGCCTTCAGC 57.118 42.857 0.00 0.00 38.24 4.26
337 338 0.825410 GGTCCCGGTTGGTTGTTTTT 59.175 50.000 0.00 0.00 34.77 1.94
338 339 0.324460 TGGTCCCGGTTGGTTGTTTT 60.324 50.000 0.00 0.00 34.77 2.43
339 340 0.324460 TTGGTCCCGGTTGGTTGTTT 60.324 50.000 0.00 0.00 34.77 2.83
340 341 0.324460 TTTGGTCCCGGTTGGTTGTT 60.324 50.000 0.00 0.00 34.77 2.83
341 342 0.753848 CTTTGGTCCCGGTTGGTTGT 60.754 55.000 0.00 0.00 34.77 3.32
342 343 1.460273 CCTTTGGTCCCGGTTGGTTG 61.460 60.000 0.00 0.00 34.77 3.77
343 344 1.152631 CCTTTGGTCCCGGTTGGTT 60.153 57.895 0.00 0.00 34.77 3.67
344 345 2.518933 CCTTTGGTCCCGGTTGGT 59.481 61.111 0.00 0.00 34.77 3.67
345 346 2.989253 GCCTTTGGTCCCGGTTGG 60.989 66.667 0.00 0.00 0.00 3.77
346 347 2.989253 GGCCTTTGGTCCCGGTTG 60.989 66.667 0.00 0.00 0.00 3.77
347 348 4.295199 GGGCCTTTGGTCCCGGTT 62.295 66.667 0.84 0.00 42.67 4.44
353 354 2.361737 GCAGGAGGGCCTTTGGTC 60.362 66.667 7.89 0.00 43.90 4.02
361 362 3.555324 GAGCCTAGGCAGGAGGGC 61.555 72.222 34.70 6.92 45.91 5.19
362 363 3.230245 CGAGCCTAGGCAGGAGGG 61.230 72.222 34.70 13.13 45.91 4.30
363 364 3.230245 CCGAGCCTAGGCAGGAGG 61.230 72.222 32.75 25.39 45.91 4.30
389 390 0.460284 GGACAGATGTGCCTACGTGG 60.460 60.000 0.00 0.00 39.35 4.94
390 391 3.050703 GGACAGATGTGCCTACGTG 57.949 57.895 0.00 0.00 0.00 4.49
397 398 0.392998 ATGAACCGGGACAGATGTGC 60.393 55.000 6.32 0.00 35.50 4.57
398 399 1.339055 ACATGAACCGGGACAGATGTG 60.339 52.381 6.32 3.31 0.00 3.21
399 400 0.984230 ACATGAACCGGGACAGATGT 59.016 50.000 6.32 5.04 0.00 3.06
400 401 2.113860 AACATGAACCGGGACAGATG 57.886 50.000 6.32 4.39 0.00 2.90
401 402 3.104512 TCTAACATGAACCGGGACAGAT 58.895 45.455 6.32 0.00 0.00 2.90
402 403 2.531771 TCTAACATGAACCGGGACAGA 58.468 47.619 6.32 0.00 0.00 3.41
403 404 3.000727 GTTCTAACATGAACCGGGACAG 58.999 50.000 6.32 2.64 40.10 3.51
404 405 3.048337 GTTCTAACATGAACCGGGACA 57.952 47.619 6.32 5.75 40.10 4.02
411 412 3.329929 AGTCCCGGTTCTAACATGAAC 57.670 47.619 0.00 0.00 43.88 3.18
412 413 5.484715 CTTTAGTCCCGGTTCTAACATGAA 58.515 41.667 12.94 1.49 0.00 2.57
413 414 4.081309 CCTTTAGTCCCGGTTCTAACATGA 60.081 45.833 12.94 1.77 0.00 3.07
414 415 4.189231 CCTTTAGTCCCGGTTCTAACATG 58.811 47.826 12.94 0.00 0.00 3.21
415 416 3.199289 CCCTTTAGTCCCGGTTCTAACAT 59.801 47.826 12.94 0.00 0.00 2.71
416 417 2.568509 CCCTTTAGTCCCGGTTCTAACA 59.431 50.000 12.94 6.43 0.00 2.41
417 418 2.093288 CCCCTTTAGTCCCGGTTCTAAC 60.093 54.545 12.94 0.00 0.00 2.34
418 419 2.190538 CCCCTTTAGTCCCGGTTCTAA 58.809 52.381 0.00 6.10 0.00 2.10
419 420 1.623279 CCCCCTTTAGTCCCGGTTCTA 60.623 57.143 0.00 0.00 0.00 2.10
420 421 0.912968 CCCCCTTTAGTCCCGGTTCT 60.913 60.000 0.00 0.15 0.00 3.01
421 422 1.605992 CCCCCTTTAGTCCCGGTTC 59.394 63.158 0.00 0.00 0.00 3.62
422 423 3.830698 CCCCCTTTAGTCCCGGTT 58.169 61.111 0.00 0.00 0.00 4.44
436 437 1.125633 TCGTTACTAATGCCTCCCCC 58.874 55.000 0.00 0.00 0.00 5.40
437 438 2.289506 GGATCGTTACTAATGCCTCCCC 60.290 54.545 0.00 0.00 0.00 4.81
438 439 2.633481 AGGATCGTTACTAATGCCTCCC 59.367 50.000 0.00 0.00 0.00 4.30
439 440 4.338379 AAGGATCGTTACTAATGCCTCC 57.662 45.455 0.00 0.00 0.00 4.30
440 441 6.514063 ACTAAAGGATCGTTACTAATGCCTC 58.486 40.000 0.22 0.00 0.00 4.70
441 442 6.462628 GGACTAAAGGATCGTTACTAATGCCT 60.463 42.308 0.22 0.00 0.00 4.75
442 443 5.695363 GGACTAAAGGATCGTTACTAATGCC 59.305 44.000 0.22 0.00 0.00 4.40
443 444 5.695363 GGGACTAAAGGATCGTTACTAATGC 59.305 44.000 0.22 0.00 0.00 3.56
444 445 5.919141 CGGGACTAAAGGATCGTTACTAATG 59.081 44.000 0.22 0.00 0.00 1.90
445 446 5.010415 CCGGGACTAAAGGATCGTTACTAAT 59.990 44.000 0.22 0.00 0.00 1.73
446 447 4.339247 CCGGGACTAAAGGATCGTTACTAA 59.661 45.833 0.22 0.00 0.00 2.24
447 448 3.885297 CCGGGACTAAAGGATCGTTACTA 59.115 47.826 0.22 0.00 0.00 1.82
448 449 2.692041 CCGGGACTAAAGGATCGTTACT 59.308 50.000 0.22 0.00 0.00 2.24
449 450 2.428530 ACCGGGACTAAAGGATCGTTAC 59.571 50.000 6.32 0.00 0.00 2.50
450 451 2.738743 ACCGGGACTAAAGGATCGTTA 58.261 47.619 6.32 0.00 0.00 3.18
451 452 1.565067 ACCGGGACTAAAGGATCGTT 58.435 50.000 6.32 0.00 0.00 3.85
452 453 1.479730 GAACCGGGACTAAAGGATCGT 59.520 52.381 6.32 0.00 0.00 3.73
453 454 1.479323 TGAACCGGGACTAAAGGATCG 59.521 52.381 6.32 0.00 30.59 3.69
454 455 3.197116 TCTTGAACCGGGACTAAAGGATC 59.803 47.826 6.32 0.00 0.00 3.36
455 456 3.178865 TCTTGAACCGGGACTAAAGGAT 58.821 45.455 6.32 0.00 0.00 3.24
456 457 2.612000 TCTTGAACCGGGACTAAAGGA 58.388 47.619 6.32 0.00 0.00 3.36
457 458 3.072211 GTTCTTGAACCGGGACTAAAGG 58.928 50.000 6.32 0.00 0.00 3.11
458 459 3.072211 GGTTCTTGAACCGGGACTAAAG 58.928 50.000 15.61 2.23 32.47 1.85
459 460 3.130280 GGTTCTTGAACCGGGACTAAA 57.870 47.619 15.61 0.00 32.47 1.85
460 461 2.845363 GGTTCTTGAACCGGGACTAA 57.155 50.000 15.61 0.00 32.47 2.24
468 469 2.845363 TTAGTCCCGGTTCTTGAACC 57.155 50.000 19.50 19.50 39.44 3.62
469 470 3.058432 GCTTTTAGTCCCGGTTCTTGAAC 60.058 47.826 0.00 5.03 0.00 3.18
470 471 3.143728 GCTTTTAGTCCCGGTTCTTGAA 58.856 45.455 0.00 0.00 0.00 2.69
471 472 2.551504 GGCTTTTAGTCCCGGTTCTTGA 60.552 50.000 0.00 0.00 0.00 3.02
472 473 1.810755 GGCTTTTAGTCCCGGTTCTTG 59.189 52.381 0.00 0.00 0.00 3.02
473 474 1.271762 GGGCTTTTAGTCCCGGTTCTT 60.272 52.381 0.00 0.00 32.63 2.52
474 475 0.327259 GGGCTTTTAGTCCCGGTTCT 59.673 55.000 0.00 0.15 32.63 3.01
475 476 0.327259 AGGGCTTTTAGTCCCGGTTC 59.673 55.000 0.00 0.00 42.20 3.62
476 477 0.775542 AAGGGCTTTTAGTCCCGGTT 59.224 50.000 0.00 0.00 42.20 4.44
477 478 1.280133 GTAAGGGCTTTTAGTCCCGGT 59.720 52.381 0.00 0.00 42.20 5.28
478 479 1.741394 CGTAAGGGCTTTTAGTCCCGG 60.741 57.143 0.00 0.00 42.20 5.73
479 480 1.205417 TCGTAAGGGCTTTTAGTCCCG 59.795 52.381 0.00 0.00 42.20 5.14
480 481 3.005554 GTTCGTAAGGGCTTTTAGTCCC 58.994 50.000 0.00 0.00 42.20 4.46
481 482 3.005554 GGTTCGTAAGGGCTTTTAGTCC 58.994 50.000 0.00 0.00 41.32 3.85
482 483 2.669924 CGGTTCGTAAGGGCTTTTAGTC 59.330 50.000 0.00 0.00 38.47 2.59
483 484 2.613725 CCGGTTCGTAAGGGCTTTTAGT 60.614 50.000 0.00 0.00 38.47 2.24
484 485 2.004733 CCGGTTCGTAAGGGCTTTTAG 58.995 52.381 0.00 0.00 38.47 1.85
485 486 1.338960 CCCGGTTCGTAAGGGCTTTTA 60.339 52.381 0.00 0.00 38.51 1.52
486 487 0.607217 CCCGGTTCGTAAGGGCTTTT 60.607 55.000 0.00 0.00 38.51 2.27
487 488 1.002990 CCCGGTTCGTAAGGGCTTT 60.003 57.895 0.00 0.00 38.51 3.51
488 489 1.914764 TCCCGGTTCGTAAGGGCTT 60.915 57.895 0.00 0.00 44.70 4.35
489 490 2.284112 TCCCGGTTCGTAAGGGCT 60.284 61.111 0.00 0.00 44.70 5.19
490 491 2.125391 GTCCCGGTTCGTAAGGGC 60.125 66.667 0.00 0.00 44.70 5.19
491 492 0.035176 TTTGTCCCGGTTCGTAAGGG 59.965 55.000 0.00 0.00 46.40 3.95
492 493 1.735571 CATTTGTCCCGGTTCGTAAGG 59.264 52.381 0.00 0.00 38.47 2.69
493 494 1.129811 GCATTTGTCCCGGTTCGTAAG 59.870 52.381 0.00 0.00 0.00 2.34
494 495 1.158434 GCATTTGTCCCGGTTCGTAA 58.842 50.000 0.00 0.00 0.00 3.18
495 496 0.674269 GGCATTTGTCCCGGTTCGTA 60.674 55.000 0.00 0.00 0.00 3.43
496 497 1.969589 GGCATTTGTCCCGGTTCGT 60.970 57.895 0.00 0.00 0.00 3.85
497 498 1.312371 ATGGCATTTGTCCCGGTTCG 61.312 55.000 0.00 0.00 0.00 3.95
498 499 0.173255 CATGGCATTTGTCCCGGTTC 59.827 55.000 0.00 0.00 0.00 3.62
499 500 0.541764 ACATGGCATTTGTCCCGGTT 60.542 50.000 0.00 0.00 0.00 4.44
500 501 0.541764 AACATGGCATTTGTCCCGGT 60.542 50.000 0.00 0.00 0.00 5.28
501 502 0.607620 AAACATGGCATTTGTCCCGG 59.392 50.000 0.00 0.00 0.00 5.73
502 503 2.029110 AGAAAACATGGCATTTGTCCCG 60.029 45.455 0.00 0.00 0.00 5.14
503 504 3.683365 AGAAAACATGGCATTTGTCCC 57.317 42.857 0.00 0.00 0.00 4.46
504 505 5.391312 AGTAGAAAACATGGCATTTGTCC 57.609 39.130 0.00 0.00 0.00 4.02
505 506 7.489113 CCATTAGTAGAAAACATGGCATTTGTC 59.511 37.037 0.00 1.05 28.09 3.18
506 507 7.322664 CCATTAGTAGAAAACATGGCATTTGT 58.677 34.615 0.00 0.00 28.09 2.83
507 508 6.757947 CCCATTAGTAGAAAACATGGCATTTG 59.242 38.462 0.00 0.00 32.62 2.32
508 509 6.630188 GCCCATTAGTAGAAAACATGGCATTT 60.630 38.462 0.00 0.00 32.62 2.32
509 510 5.163416 GCCCATTAGTAGAAAACATGGCATT 60.163 40.000 0.00 0.00 32.62 3.56
510 511 4.342092 GCCCATTAGTAGAAAACATGGCAT 59.658 41.667 0.00 0.00 32.62 4.40
511 512 3.699038 GCCCATTAGTAGAAAACATGGCA 59.301 43.478 0.00 0.00 32.62 4.92
512 513 3.699038 TGCCCATTAGTAGAAAACATGGC 59.301 43.478 0.00 0.00 32.62 4.40
513 514 5.913137 TTGCCCATTAGTAGAAAACATGG 57.087 39.130 0.00 0.00 33.38 3.66
514 515 5.750067 GCATTGCCCATTAGTAGAAAACATG 59.250 40.000 0.00 0.00 0.00 3.21
515 516 5.163416 GGCATTGCCCATTAGTAGAAAACAT 60.163 40.000 17.28 0.00 44.06 2.71
516 517 4.159506 GGCATTGCCCATTAGTAGAAAACA 59.840 41.667 17.28 0.00 44.06 2.83
517 518 4.682787 GGCATTGCCCATTAGTAGAAAAC 58.317 43.478 17.28 0.00 44.06 2.43
531 532 1.523154 TTCCAAGTGACGGCATTGCC 61.523 55.000 18.10 18.10 46.75 4.52
532 533 0.109597 CTTCCAAGTGACGGCATTGC 60.110 55.000 0.00 0.00 0.00 3.56
533 534 1.522668 TCTTCCAAGTGACGGCATTG 58.477 50.000 0.00 0.00 0.00 2.82
534 535 2.359900 GATCTTCCAAGTGACGGCATT 58.640 47.619 0.00 0.00 0.00 3.56
535 536 1.407437 GGATCTTCCAAGTGACGGCAT 60.407 52.381 0.00 0.00 36.28 4.40
536 537 0.036388 GGATCTTCCAAGTGACGGCA 60.036 55.000 0.00 0.00 36.28 5.69
537 538 0.744771 GGGATCTTCCAAGTGACGGC 60.745 60.000 0.00 0.00 38.64 5.68
538 539 0.460284 CGGGATCTTCCAAGTGACGG 60.460 60.000 0.00 0.00 38.64 4.79
539 540 1.084370 GCGGGATCTTCCAAGTGACG 61.084 60.000 0.00 0.00 38.64 4.35
540 541 0.036388 TGCGGGATCTTCCAAGTGAC 60.036 55.000 0.00 0.00 38.64 3.67
541 542 0.690192 TTGCGGGATCTTCCAAGTGA 59.310 50.000 0.00 0.00 38.64 3.41
542 543 0.804989 GTTGCGGGATCTTCCAAGTG 59.195 55.000 0.00 0.00 38.64 3.16
543 544 0.693049 AGTTGCGGGATCTTCCAAGT 59.307 50.000 0.00 0.00 38.64 3.16
544 545 1.089920 CAGTTGCGGGATCTTCCAAG 58.910 55.000 0.00 0.00 38.64 3.61
545 546 0.400213 ACAGTTGCGGGATCTTCCAA 59.600 50.000 0.00 0.00 38.64 3.53
546 547 0.321564 CACAGTTGCGGGATCTTCCA 60.322 55.000 0.00 0.00 38.64 3.53
547 548 0.036388 TCACAGTTGCGGGATCTTCC 60.036 55.000 0.00 0.00 35.23 3.46
548 549 1.079503 GTCACAGTTGCGGGATCTTC 58.920 55.000 0.00 0.00 0.00 2.87
549 550 0.396435 TGTCACAGTTGCGGGATCTT 59.604 50.000 0.00 0.00 0.00 2.40
550 551 0.615331 ATGTCACAGTTGCGGGATCT 59.385 50.000 0.00 0.00 0.00 2.75
551 552 0.729116 CATGTCACAGTTGCGGGATC 59.271 55.000 0.00 0.00 0.00 3.36
552 553 1.308069 GCATGTCACAGTTGCGGGAT 61.308 55.000 0.00 0.00 0.00 3.85
553 554 1.965930 GCATGTCACAGTTGCGGGA 60.966 57.895 0.00 0.00 0.00 5.14
554 555 1.915614 GAGCATGTCACAGTTGCGGG 61.916 60.000 0.00 0.00 41.22 6.13
555 556 0.952497 AGAGCATGTCACAGTTGCGG 60.952 55.000 0.00 0.00 41.22 5.69
556 557 0.441533 GAGAGCATGTCACAGTTGCG 59.558 55.000 0.00 0.00 41.22 4.85
557 558 1.516161 TGAGAGCATGTCACAGTTGC 58.484 50.000 0.00 0.00 31.16 4.17
558 559 3.501062 ACAATGAGAGCATGTCACAGTTG 59.499 43.478 0.00 5.79 43.07 3.16
559 560 3.748083 ACAATGAGAGCATGTCACAGTT 58.252 40.909 0.00 0.00 43.07 3.16
560 561 3.413846 ACAATGAGAGCATGTCACAGT 57.586 42.857 0.00 0.00 43.07 3.55
561 562 3.620374 GGTACAATGAGAGCATGTCACAG 59.380 47.826 0.00 0.00 43.07 3.66
562 563 3.599343 GGTACAATGAGAGCATGTCACA 58.401 45.455 0.00 0.00 43.07 3.58
563 564 2.604914 CGGTACAATGAGAGCATGTCAC 59.395 50.000 0.00 0.00 43.07 3.67
564 565 2.495669 TCGGTACAATGAGAGCATGTCA 59.504 45.455 0.00 0.00 44.97 3.58
565 566 2.860735 GTCGGTACAATGAGAGCATGTC 59.139 50.000 0.00 0.00 34.26 3.06
566 567 2.233676 TGTCGGTACAATGAGAGCATGT 59.766 45.455 0.00 0.00 34.26 3.21
567 568 2.604914 GTGTCGGTACAATGAGAGCATG 59.395 50.000 0.00 0.00 37.36 4.06
568 569 2.418746 GGTGTCGGTACAATGAGAGCAT 60.419 50.000 0.00 0.00 37.36 3.79
569 570 1.067142 GGTGTCGGTACAATGAGAGCA 60.067 52.381 0.00 0.00 37.36 4.26
570 571 1.641577 GGTGTCGGTACAATGAGAGC 58.358 55.000 0.00 0.00 37.36 4.09
571 572 1.471287 TCGGTGTCGGTACAATGAGAG 59.529 52.381 0.00 0.00 37.36 3.20
572 573 1.200716 GTCGGTGTCGGTACAATGAGA 59.799 52.381 0.00 0.00 37.36 3.27
573 574 1.068125 TGTCGGTGTCGGTACAATGAG 60.068 52.381 0.00 0.00 37.36 2.90
574 575 0.960286 TGTCGGTGTCGGTACAATGA 59.040 50.000 0.00 0.00 37.36 2.57
575 576 1.658596 CATGTCGGTGTCGGTACAATG 59.341 52.381 0.00 0.00 37.36 2.82
576 577 1.404986 CCATGTCGGTGTCGGTACAAT 60.405 52.381 0.00 0.00 37.36 2.71
577 578 0.038067 CCATGTCGGTGTCGGTACAA 60.038 55.000 0.00 0.00 37.36 2.41
578 579 1.587568 CCATGTCGGTGTCGGTACA 59.412 57.895 0.00 0.00 36.95 2.90
579 580 1.808390 GCCATGTCGGTGTCGGTAC 60.808 63.158 0.00 0.00 36.97 3.34
580 581 1.980232 AGCCATGTCGGTGTCGGTA 60.980 57.895 0.00 0.00 36.97 4.02
581 582 3.311110 AGCCATGTCGGTGTCGGT 61.311 61.111 0.00 0.00 36.97 4.69
582 583 2.815211 CAGCCATGTCGGTGTCGG 60.815 66.667 0.00 0.00 36.97 4.79
583 584 1.807165 CTCAGCCATGTCGGTGTCG 60.807 63.158 0.00 0.00 36.97 4.35
584 585 2.103042 GCTCAGCCATGTCGGTGTC 61.103 63.158 0.00 0.00 36.97 3.67
585 586 2.046892 GCTCAGCCATGTCGGTGT 60.047 61.111 0.00 0.00 36.97 4.16
586 587 2.104859 CAGCTCAGCCATGTCGGTG 61.105 63.158 0.00 0.00 36.97 4.94
587 588 2.267006 CAGCTCAGCCATGTCGGT 59.733 61.111 0.00 0.00 36.97 4.69
588 589 2.104859 CACAGCTCAGCCATGTCGG 61.105 63.158 0.00 0.00 38.11 4.79
589 590 0.671472 TTCACAGCTCAGCCATGTCG 60.671 55.000 0.00 0.00 0.00 4.35
590 591 1.085091 CTTCACAGCTCAGCCATGTC 58.915 55.000 0.00 0.00 0.00 3.06
591 592 0.322277 CCTTCACAGCTCAGCCATGT 60.322 55.000 0.00 0.00 0.00 3.21
592 593 0.035725 TCCTTCACAGCTCAGCCATG 60.036 55.000 0.00 0.00 0.00 3.66
593 594 0.252479 CTCCTTCACAGCTCAGCCAT 59.748 55.000 0.00 0.00 0.00 4.40
594 595 0.833409 TCTCCTTCACAGCTCAGCCA 60.833 55.000 0.00 0.00 0.00 4.75
595 596 0.322975 TTCTCCTTCACAGCTCAGCC 59.677 55.000 0.00 0.00 0.00 4.85
596 597 1.803555 GTTTCTCCTTCACAGCTCAGC 59.196 52.381 0.00 0.00 0.00 4.26
597 598 3.399440 AGTTTCTCCTTCACAGCTCAG 57.601 47.619 0.00 0.00 0.00 3.35
598 599 4.588951 TCTTAGTTTCTCCTTCACAGCTCA 59.411 41.667 0.00 0.00 0.00 4.26
599 600 5.047660 TCTCTTAGTTTCTCCTTCACAGCTC 60.048 44.000 0.00 0.00 0.00 4.09
600 601 4.835615 TCTCTTAGTTTCTCCTTCACAGCT 59.164 41.667 0.00 0.00 0.00 4.24
601 602 5.140747 TCTCTTAGTTTCTCCTTCACAGC 57.859 43.478 0.00 0.00 0.00 4.40
602 603 5.580297 GCATCTCTTAGTTTCTCCTTCACAG 59.420 44.000 0.00 0.00 0.00 3.66
603 604 5.482908 GCATCTCTTAGTTTCTCCTTCACA 58.517 41.667 0.00 0.00 0.00 3.58
604 605 4.873259 GGCATCTCTTAGTTTCTCCTTCAC 59.127 45.833 0.00 0.00 0.00 3.18
605 606 4.532126 TGGCATCTCTTAGTTTCTCCTTCA 59.468 41.667 0.00 0.00 0.00 3.02
606 607 5.091261 TGGCATCTCTTAGTTTCTCCTTC 57.909 43.478 0.00 0.00 0.00 3.46
607 608 5.495640 CTTGGCATCTCTTAGTTTCTCCTT 58.504 41.667 0.00 0.00 0.00 3.36
608 609 4.080638 CCTTGGCATCTCTTAGTTTCTCCT 60.081 45.833 0.00 0.00 0.00 3.69
609 610 4.195416 CCTTGGCATCTCTTAGTTTCTCC 58.805 47.826 0.00 0.00 0.00 3.71
610 611 4.633565 CACCTTGGCATCTCTTAGTTTCTC 59.366 45.833 0.00 0.00 0.00 2.87
611 612 4.287067 TCACCTTGGCATCTCTTAGTTTCT 59.713 41.667 0.00 0.00 0.00 2.52
612 613 4.579869 TCACCTTGGCATCTCTTAGTTTC 58.420 43.478 0.00 0.00 0.00 2.78
613 614 4.640771 TCACCTTGGCATCTCTTAGTTT 57.359 40.909 0.00 0.00 0.00 2.66
614 615 4.327680 GTTCACCTTGGCATCTCTTAGTT 58.672 43.478 0.00 0.00 0.00 2.24
615 616 3.307762 GGTTCACCTTGGCATCTCTTAGT 60.308 47.826 0.00 0.00 0.00 2.24
616 617 3.274288 GGTTCACCTTGGCATCTCTTAG 58.726 50.000 0.00 0.00 0.00 2.18
617 618 2.642311 TGGTTCACCTTGGCATCTCTTA 59.358 45.455 0.00 0.00 36.82 2.10
618 619 1.425066 TGGTTCACCTTGGCATCTCTT 59.575 47.619 0.00 0.00 36.82 2.85
619 620 1.004044 CTGGTTCACCTTGGCATCTCT 59.996 52.381 0.00 0.00 36.82 3.10
620 621 1.457346 CTGGTTCACCTTGGCATCTC 58.543 55.000 0.00 0.00 36.82 2.75
621 622 0.610232 GCTGGTTCACCTTGGCATCT 60.610 55.000 0.00 0.00 36.82 2.90
622 623 0.895100 TGCTGGTTCACCTTGGCATC 60.895 55.000 0.00 0.00 34.15 3.91
623 624 0.469705 TTGCTGGTTCACCTTGGCAT 60.470 50.000 10.84 0.00 36.91 4.40
624 625 0.685785 TTTGCTGGTTCACCTTGGCA 60.686 50.000 0.00 3.07 35.95 4.92
625 626 0.032540 CTTTGCTGGTTCACCTTGGC 59.967 55.000 0.00 0.53 36.82 4.52
626 627 0.675633 CCTTTGCTGGTTCACCTTGG 59.324 55.000 0.00 0.00 36.82 3.61
627 628 1.338020 GTCCTTTGCTGGTTCACCTTG 59.662 52.381 0.00 0.00 36.82 3.61
628 629 1.064017 TGTCCTTTGCTGGTTCACCTT 60.064 47.619 0.00 0.00 36.82 3.50
629 630 0.550914 TGTCCTTTGCTGGTTCACCT 59.449 50.000 0.00 0.00 36.82 4.00
630 631 1.270550 CATGTCCTTTGCTGGTTCACC 59.729 52.381 0.00 0.00 0.00 4.02
631 632 2.227388 CTCATGTCCTTTGCTGGTTCAC 59.773 50.000 0.00 0.00 0.00 3.18
632 633 2.507484 CTCATGTCCTTTGCTGGTTCA 58.493 47.619 0.00 0.00 0.00 3.18
633 634 1.815003 CCTCATGTCCTTTGCTGGTTC 59.185 52.381 0.00 0.00 0.00 3.62
634 635 1.425066 TCCTCATGTCCTTTGCTGGTT 59.575 47.619 0.00 0.00 0.00 3.67
635 636 1.004044 CTCCTCATGTCCTTTGCTGGT 59.996 52.381 0.00 0.00 0.00 4.00
636 637 1.004044 ACTCCTCATGTCCTTTGCTGG 59.996 52.381 0.00 0.00 0.00 4.85
637 638 2.486472 ACTCCTCATGTCCTTTGCTG 57.514 50.000 0.00 0.00 0.00 4.41
638 639 3.073650 AGAAACTCCTCATGTCCTTTGCT 59.926 43.478 0.00 0.00 0.00 3.91
639 640 3.416156 AGAAACTCCTCATGTCCTTTGC 58.584 45.455 0.00 0.00 0.00 3.68
640 641 4.006319 GGAGAAACTCCTCATGTCCTTTG 58.994 47.826 10.16 0.00 46.41 2.77
641 642 4.293662 GGAGAAACTCCTCATGTCCTTT 57.706 45.455 10.16 0.00 46.41 3.11
642 643 3.990959 GGAGAAACTCCTCATGTCCTT 57.009 47.619 10.16 0.00 46.41 3.36
666 667 4.881850 AGACCTCGCTCTTTTCTTGAAAAA 59.118 37.500 9.41 0.00 0.00 1.94
667 668 4.273480 CAGACCTCGCTCTTTTCTTGAAAA 59.727 41.667 8.07 8.07 0.00 2.29
668 669 3.809832 CAGACCTCGCTCTTTTCTTGAAA 59.190 43.478 0.00 0.00 0.00 2.69
669 670 3.069586 TCAGACCTCGCTCTTTTCTTGAA 59.930 43.478 0.00 0.00 0.00 2.69
670 671 2.628178 TCAGACCTCGCTCTTTTCTTGA 59.372 45.455 0.00 0.00 0.00 3.02
671 672 3.032017 TCAGACCTCGCTCTTTTCTTG 57.968 47.619 0.00 0.00 0.00 3.02
672 673 3.070302 ACTTCAGACCTCGCTCTTTTCTT 59.930 43.478 0.00 0.00 0.00 2.52
673 674 2.630580 ACTTCAGACCTCGCTCTTTTCT 59.369 45.455 0.00 0.00 0.00 2.52
674 675 3.033368 ACTTCAGACCTCGCTCTTTTC 57.967 47.619 0.00 0.00 0.00 2.29
675 676 3.827302 TCTACTTCAGACCTCGCTCTTTT 59.173 43.478 0.00 0.00 0.00 2.27
676 677 3.422796 TCTACTTCAGACCTCGCTCTTT 58.577 45.455 0.00 0.00 0.00 2.52
677 678 3.074675 TCTACTTCAGACCTCGCTCTT 57.925 47.619 0.00 0.00 0.00 2.85
678 679 2.791347 TCTACTTCAGACCTCGCTCT 57.209 50.000 0.00 0.00 0.00 4.09
679 680 5.699097 AATATCTACTTCAGACCTCGCTC 57.301 43.478 0.00 0.00 35.62 5.03
680 681 6.096987 TCAAAATATCTACTTCAGACCTCGCT 59.903 38.462 0.00 0.00 35.62 4.93
681 682 6.273825 TCAAAATATCTACTTCAGACCTCGC 58.726 40.000 0.00 0.00 35.62 5.03
682 683 7.484975 ACTCAAAATATCTACTTCAGACCTCG 58.515 38.462 0.00 0.00 35.62 4.63
714 715 7.342026 GGGTCCCAGATATTCTTGTTATTTTGT 59.658 37.037 1.78 0.00 0.00 2.83
722 723 2.858644 TGGGGTCCCAGATATTCTTGT 58.141 47.619 10.98 0.00 41.89 3.16
735 736 7.273712 TGTAATTTTAACAACTTTTGGGGTCC 58.726 34.615 0.00 0.00 34.12 4.46
849 862 2.000447 GTTACCGTTAGGCTCTGCTTG 59.000 52.381 0.00 0.00 42.76 4.01
864 877 6.993079 AGGAAATCCACTGAAAAATGTTACC 58.007 36.000 1.67 0.00 38.89 2.85
913 926 1.078426 AAGAGAAACCATCGGCCGG 60.078 57.895 27.83 12.37 0.00 6.13
979 1019 3.288381 AGGGAGGAGGGCAGAGGT 61.288 66.667 0.00 0.00 0.00 3.85
982 1022 4.465446 CGGAGGGAGGAGGGCAGA 62.465 72.222 0.00 0.00 0.00 4.26
985 1025 3.237741 CATCGGAGGGAGGAGGGC 61.238 72.222 0.00 0.00 0.00 5.19
1036 1076 2.444140 CTCCCGATCCCTTCCCGT 60.444 66.667 0.00 0.00 0.00 5.28
1228 1271 0.404426 GGGGGCTTACACTCCTTGTT 59.596 55.000 0.00 0.00 39.91 2.83
1250 1293 1.223763 GGAGAATCGGTTGGGGGAC 59.776 63.158 0.00 0.00 34.37 4.46
1272 1315 3.987404 GCAATCAACAGCGACCCT 58.013 55.556 0.00 0.00 0.00 4.34
1309 1355 1.081094 ATTACACCGGTACAAAGCGC 58.919 50.000 6.87 0.00 45.10 5.92
1312 1358 4.677832 GTGCAAAATTACACCGGTACAAAG 59.322 41.667 6.87 0.00 0.00 2.77
1313 1359 4.097437 TGTGCAAAATTACACCGGTACAAA 59.903 37.500 6.87 1.72 35.90 2.83
1314 1360 3.630769 TGTGCAAAATTACACCGGTACAA 59.369 39.130 6.87 4.33 35.90 2.41
1315 1361 3.003482 GTGTGCAAAATTACACCGGTACA 59.997 43.478 6.87 0.00 40.90 2.90
1316 1362 3.003482 TGTGTGCAAAATTACACCGGTAC 59.997 43.478 6.87 0.00 44.94 3.34
1317 1363 3.211865 TGTGTGCAAAATTACACCGGTA 58.788 40.909 6.87 0.00 44.94 4.02
1318 1364 2.025155 TGTGTGCAAAATTACACCGGT 58.975 42.857 0.00 0.00 44.94 5.28
1320 1366 3.241784 GTGTTGTGTGCAAAATTACACCG 59.758 43.478 6.73 0.00 44.94 4.94
1322 1368 7.692908 ATTAGTGTTGTGTGCAAAATTACAC 57.307 32.000 8.60 8.60 45.57 2.90
1343 1389 6.878923 AGCGCAATACCATGCTAGAATTATTA 59.121 34.615 11.47 0.00 44.21 0.98
1344 1390 5.707298 AGCGCAATACCATGCTAGAATTATT 59.293 36.000 11.47 0.00 44.21 1.40
1345 1391 5.248640 AGCGCAATACCATGCTAGAATTAT 58.751 37.500 11.47 0.00 44.21 1.28
1346 1392 4.641396 AGCGCAATACCATGCTAGAATTA 58.359 39.130 11.47 0.00 44.21 1.40
1354 1400 2.097466 AGTACAAAGCGCAATACCATGC 59.903 45.455 11.47 0.00 42.94 4.06
1355 1401 4.570772 ACTAGTACAAAGCGCAATACCATG 59.429 41.667 11.47 0.00 0.00 3.66
1357 1403 3.930229 CACTAGTACAAAGCGCAATACCA 59.070 43.478 11.47 0.00 0.00 3.25
1358 1404 4.178540 TCACTAGTACAAAGCGCAATACC 58.821 43.478 11.47 0.00 0.00 2.73
1359 1405 4.863131 ACTCACTAGTACAAAGCGCAATAC 59.137 41.667 11.47 6.21 32.84 1.89
1376 1424 0.536687 TCTGAACCGACGGACTCACT 60.537 55.000 23.38 0.00 0.00 3.41
1383 1431 2.363788 TCTGAATTCTGAACCGACGG 57.636 50.000 13.61 13.61 0.00 4.79
1384 1432 3.741344 AGTTTCTGAATTCTGAACCGACG 59.259 43.478 22.87 0.00 34.31 5.12
1421 1475 3.303406 GGTAACTCGACCACGCATATAC 58.697 50.000 0.00 0.00 39.51 1.47
1423 1477 2.503920 GGTAACTCGACCACGCATAT 57.496 50.000 0.00 0.00 39.51 1.78
1431 1485 4.747989 TGTGCAACCAGGTAACTCGACC 62.748 54.545 0.00 0.00 38.83 4.79
1443 1497 2.440253 ACTTACCCTAGTTGTGCAACCA 59.560 45.455 11.00 0.00 42.06 3.67
1455 1548 1.613255 GCAGGCTGCAAACTTACCCTA 60.613 52.381 33.33 0.00 44.26 3.53
1469 1562 1.821136 GCAGGATTTTTACAGCAGGCT 59.179 47.619 0.00 0.00 0.00 4.58
1470 1563 1.821136 AGCAGGATTTTTACAGCAGGC 59.179 47.619 0.00 0.00 0.00 4.85
1471 1564 2.165030 CCAGCAGGATTTTTACAGCAGG 59.835 50.000 0.00 0.00 36.89 4.85
1472 1565 2.416431 GCCAGCAGGATTTTTACAGCAG 60.416 50.000 0.00 0.00 36.89 4.24
1504 1611 6.069673 TGGTGGATGAACTGGTAAGTTATCAT 60.070 38.462 0.00 0.00 46.84 2.45
1517 1628 2.644299 TGAACTGGATGGTGGATGAACT 59.356 45.455 0.00 0.00 0.00 3.01
1565 1676 5.463061 TGGTGCTCTTTACGTTGTAGTAAAC 59.537 40.000 0.00 0.00 40.43 2.01
1572 1683 1.937899 GTGTGGTGCTCTTTACGTTGT 59.062 47.619 0.00 0.00 0.00 3.32
1593 1780 6.971756 TGAATGGCGTAACATGAATTGTATTG 59.028 34.615 0.00 0.00 37.68 1.90
1602 1789 3.937814 AGAGTTGAATGGCGTAACATGA 58.062 40.909 0.00 0.00 0.00 3.07
1611 1798 4.327680 AGAACAGGTAAGAGTTGAATGGC 58.672 43.478 0.00 0.00 0.00 4.40
1622 1809 7.266400 GGTCTGTCCTTTATAGAACAGGTAAG 58.734 42.308 0.00 0.00 39.62 2.34
1625 1812 4.470304 GGGTCTGTCCTTTATAGAACAGGT 59.530 45.833 0.00 0.00 39.62 4.00
1627 1814 5.187967 ACTGGGTCTGTCCTTTATAGAACAG 59.812 44.000 0.00 0.00 34.82 3.16
1628 1815 5.046591 CACTGGGTCTGTCCTTTATAGAACA 60.047 44.000 0.00 0.00 34.82 3.18
1629 1816 5.420409 CACTGGGTCTGTCCTTTATAGAAC 58.580 45.833 0.00 0.00 32.44 3.01
1632 1819 3.197766 TGCACTGGGTCTGTCCTTTATAG 59.802 47.826 0.00 0.00 36.25 1.31
1633 1820 3.178046 TGCACTGGGTCTGTCCTTTATA 58.822 45.455 0.00 0.00 36.25 0.98
1636 1823 0.773644 ATGCACTGGGTCTGTCCTTT 59.226 50.000 0.00 0.00 36.25 3.11
1640 1827 2.898705 CTTCTATGCACTGGGTCTGTC 58.101 52.381 0.00 0.00 0.00 3.51
1642 1829 1.209019 AGCTTCTATGCACTGGGTCTG 59.791 52.381 0.00 0.00 34.99 3.51
1643 1830 1.484240 GAGCTTCTATGCACTGGGTCT 59.516 52.381 0.00 0.00 34.99 3.85
1652 1839 2.012673 CTTGTGTGGGAGCTTCTATGC 58.987 52.381 0.00 0.00 0.00 3.14
1653 1840 2.026822 ACCTTGTGTGGGAGCTTCTATG 60.027 50.000 0.00 0.00 0.00 2.23
1655 1842 1.347707 CACCTTGTGTGGGAGCTTCTA 59.652 52.381 0.00 0.00 41.52 2.10
1656 1843 0.109342 CACCTTGTGTGGGAGCTTCT 59.891 55.000 0.00 0.00 41.52 2.85
1657 1844 2.633860 CACCTTGTGTGGGAGCTTC 58.366 57.895 0.00 0.00 41.52 3.86
1658 1845 4.907457 CACCTTGTGTGGGAGCTT 57.093 55.556 0.00 0.00 41.52 3.74
1665 1852 1.398958 CCCAAACCCCACCTTGTGTG 61.399 60.000 0.00 0.00 45.01 3.82
1667 1854 1.836604 CCCCAAACCCCACCTTGTG 60.837 63.158 0.00 0.00 0.00 3.33
1668 1855 2.015726 TCCCCAAACCCCACCTTGT 61.016 57.895 0.00 0.00 0.00 3.16
1669 1856 1.228862 CTCCCCAAACCCCACCTTG 60.229 63.158 0.00 0.00 0.00 3.61
1670 1857 2.478803 CCTCCCCAAACCCCACCTT 61.479 63.158 0.00 0.00 0.00 3.50
1671 1858 2.863988 CCTCCCCAAACCCCACCT 60.864 66.667 0.00 0.00 0.00 4.00
1672 1859 3.992641 CCCTCCCCAAACCCCACC 61.993 72.222 0.00 0.00 0.00 4.61
1673 1860 1.811025 AATCCCTCCCCAAACCCCAC 61.811 60.000 0.00 0.00 0.00 4.61
1675 1862 1.241485 ATAATCCCTCCCCAAACCCC 58.759 55.000 0.00 0.00 0.00 4.95
1676 1863 2.378886 CCTATAATCCCTCCCCAAACCC 59.621 54.545 0.00 0.00 0.00 4.11
1677 1864 3.332968 TCCTATAATCCCTCCCCAAACC 58.667 50.000 0.00 0.00 0.00 3.27
1678 1865 4.447325 GGTTCCTATAATCCCTCCCCAAAC 60.447 50.000 0.00 0.00 0.00 2.93
1679 1866 3.725267 GGTTCCTATAATCCCTCCCCAAA 59.275 47.826 0.00 0.00 0.00 3.28
1681 1868 2.531463 AGGTTCCTATAATCCCTCCCCA 59.469 50.000 0.00 0.00 0.00 4.96
1682 1869 3.293215 AGGTTCCTATAATCCCTCCCC 57.707 52.381 0.00 0.00 0.00 4.81
1684 1871 5.906254 AGACTAGGTTCCTATAATCCCTCC 58.094 45.833 0.00 0.00 0.00 4.30
1685 1872 7.396907 GGTAAGACTAGGTTCCTATAATCCCTC 59.603 44.444 0.00 0.00 0.00 4.30
1686 1873 7.247500 GGTAAGACTAGGTTCCTATAATCCCT 58.753 42.308 0.00 0.00 0.00 4.20
1687 1874 6.440010 GGGTAAGACTAGGTTCCTATAATCCC 59.560 46.154 0.00 4.36 0.00 3.85
1688 1875 6.440010 GGGGTAAGACTAGGTTCCTATAATCC 59.560 46.154 0.00 0.00 0.00 3.01
1689 1876 7.178805 CAGGGGTAAGACTAGGTTCCTATAATC 59.821 44.444 0.00 0.00 0.00 1.75
1690 1877 7.017531 CAGGGGTAAGACTAGGTTCCTATAAT 58.982 42.308 0.00 0.00 0.00 1.28
1693 1880 4.817286 CAGGGGTAAGACTAGGTTCCTAT 58.183 47.826 0.00 0.00 0.00 2.57
1695 1882 2.893153 GCAGGGGTAAGACTAGGTTCCT 60.893 54.545 0.00 0.00 0.00 3.36
1696 1883 1.485480 GCAGGGGTAAGACTAGGTTCC 59.515 57.143 0.00 0.00 0.00 3.62
1697 1884 2.185387 TGCAGGGGTAAGACTAGGTTC 58.815 52.381 0.00 0.00 0.00 3.62
1698 1885 2.337359 TGCAGGGGTAAGACTAGGTT 57.663 50.000 0.00 0.00 0.00 3.50
1699 1886 2.337359 TTGCAGGGGTAAGACTAGGT 57.663 50.000 0.00 0.00 0.00 3.08
1700 1887 2.572104 ACTTTGCAGGGGTAAGACTAGG 59.428 50.000 2.16 0.00 0.00 3.02
1701 1888 3.600388 CACTTTGCAGGGGTAAGACTAG 58.400 50.000 2.16 0.00 0.00 2.57
1702 1889 2.290071 GCACTTTGCAGGGGTAAGACTA 60.290 50.000 2.16 0.00 44.26 2.59
1703 1890 1.545651 GCACTTTGCAGGGGTAAGACT 60.546 52.381 2.16 0.00 44.26 3.24
1704 1891 0.881796 GCACTTTGCAGGGGTAAGAC 59.118 55.000 2.16 0.00 44.26 3.01
1705 1892 3.339547 GCACTTTGCAGGGGTAAGA 57.660 52.632 2.16 0.00 44.26 2.10
1715 1902 1.402456 CCTCTCTGCATTGCACTTTGC 60.402 52.381 7.38 8.20 45.29 3.68
1716 1903 1.402456 GCCTCTCTGCATTGCACTTTG 60.402 52.381 7.38 0.00 33.79 2.77
1717 1904 0.886563 GCCTCTCTGCATTGCACTTT 59.113 50.000 7.38 0.00 33.79 2.66
1718 1905 0.037877 AGCCTCTCTGCATTGCACTT 59.962 50.000 7.38 0.00 33.79 3.16
1719 1906 0.677098 CAGCCTCTCTGCATTGCACT 60.677 55.000 7.38 0.00 35.78 4.40
1720 1907 1.654954 CCAGCCTCTCTGCATTGCAC 61.655 60.000 7.38 0.00 41.50 4.57
1721 1908 1.378119 CCAGCCTCTCTGCATTGCA 60.378 57.895 11.50 11.50 41.50 4.08
1722 1909 0.964358 AACCAGCCTCTCTGCATTGC 60.964 55.000 0.46 0.46 41.50 3.56
1723 1910 1.093159 GAACCAGCCTCTCTGCATTG 58.907 55.000 0.00 0.00 41.50 2.82
1724 1911 0.392193 CGAACCAGCCTCTCTGCATT 60.392 55.000 0.00 0.00 41.50 3.56
1725 1912 1.220206 CGAACCAGCCTCTCTGCAT 59.780 57.895 0.00 0.00 41.50 3.96
1726 1913 1.471829 TTCGAACCAGCCTCTCTGCA 61.472 55.000 0.00 0.00 41.50 4.41
1727 1914 1.016653 GTTCGAACCAGCCTCTCTGC 61.017 60.000 17.68 0.00 41.50 4.26
1728 1915 3.129792 GTTCGAACCAGCCTCTCTG 57.870 57.895 17.68 0.00 42.49 3.35
1739 1926 0.685660 AAGAGGTCCTGGGTTCGAAC 59.314 55.000 20.14 20.14 0.00 3.95
1740 1927 0.685097 CAAGAGGTCCTGGGTTCGAA 59.315 55.000 0.00 0.00 0.00 3.71
1741 1928 1.192146 CCAAGAGGTCCTGGGTTCGA 61.192 60.000 0.00 0.00 30.82 3.71
1742 1929 1.296715 CCAAGAGGTCCTGGGTTCG 59.703 63.158 0.00 0.00 30.82 3.95
1743 1930 1.002011 GCCAAGAGGTCCTGGGTTC 60.002 63.158 0.00 0.00 38.32 3.62
1744 1931 1.774217 TGCCAAGAGGTCCTGGGTT 60.774 57.895 0.00 0.00 38.32 4.11
1745 1932 2.121963 TGCCAAGAGGTCCTGGGT 60.122 61.111 0.00 0.00 38.32 4.51
1746 1933 2.067932 TTGTGCCAAGAGGTCCTGGG 62.068 60.000 0.00 0.00 39.14 4.45
1747 1934 0.607489 CTTGTGCCAAGAGGTCCTGG 60.607 60.000 0.00 0.00 37.19 4.45
1748 1935 0.109342 ACTTGTGCCAAGAGGTCCTG 59.891 55.000 18.22 0.00 37.19 3.86
1749 1936 0.109342 CACTTGTGCCAAGAGGTCCT 59.891 55.000 18.22 0.00 37.19 3.85
1750 1937 0.890996 CCACTTGTGCCAAGAGGTCC 60.891 60.000 18.22 0.00 37.19 4.46
1751 1938 0.890996 CCCACTTGTGCCAAGAGGTC 60.891 60.000 21.11 0.00 37.19 3.85
1752 1939 1.151450 CCCACTTGTGCCAAGAGGT 59.849 57.895 21.11 2.99 37.19 3.85
1753 1940 1.604593 CCCCACTTGTGCCAAGAGG 60.605 63.158 18.22 18.17 38.23 3.69
1754 1941 0.607489 CTCCCCACTTGTGCCAAGAG 60.607 60.000 18.22 11.85 0.00 2.85
1755 1942 1.455849 CTCCCCACTTGTGCCAAGA 59.544 57.895 18.22 0.00 0.00 3.02
1756 1943 1.604593 CCTCCCCACTTGTGCCAAG 60.605 63.158 11.87 11.87 0.00 3.61
1757 1944 2.081787 TCCTCCCCACTTGTGCCAA 61.082 57.895 0.00 0.00 0.00 4.52
1758 1945 2.449518 TCCTCCCCACTTGTGCCA 60.450 61.111 0.00 0.00 0.00 4.92
1759 1946 2.034221 GTCCTCCCCACTTGTGCC 59.966 66.667 0.00 0.00 0.00 5.01
1760 1947 0.606673 GAAGTCCTCCCCACTTGTGC 60.607 60.000 0.00 0.00 34.10 4.57
1761 1948 0.764890 TGAAGTCCTCCCCACTTGTG 59.235 55.000 0.00 0.00 34.10 3.33
1762 1949 0.765510 GTGAAGTCCTCCCCACTTGT 59.234 55.000 0.00 0.00 34.10 3.16
1763 1950 0.036875 GGTGAAGTCCTCCCCACTTG 59.963 60.000 0.00 0.00 34.10 3.16
1764 1951 0.401395 TGGTGAAGTCCTCCCCACTT 60.401 55.000 0.00 0.00 36.77 3.16
1765 1952 1.128188 GTGGTGAAGTCCTCCCCACT 61.128 60.000 0.00 0.00 41.83 4.00
1766 1953 1.128188 AGTGGTGAAGTCCTCCCCAC 61.128 60.000 0.00 0.00 44.69 4.61
1767 1954 1.127567 CAGTGGTGAAGTCCTCCCCA 61.128 60.000 0.00 0.00 0.00 4.96
1768 1955 1.679898 CAGTGGTGAAGTCCTCCCC 59.320 63.158 0.00 0.00 0.00 4.81
1769 1956 1.003233 GCAGTGGTGAAGTCCTCCC 60.003 63.158 0.00 0.00 0.00 4.30
1770 1957 1.374758 CGCAGTGGTGAAGTCCTCC 60.375 63.158 0.00 0.00 0.00 4.30
1771 1958 2.029844 GCGCAGTGGTGAAGTCCTC 61.030 63.158 0.30 0.00 0.00 3.71
1772 1959 2.031163 GCGCAGTGGTGAAGTCCT 59.969 61.111 0.30 0.00 0.00 3.85
1773 1960 3.050275 GGCGCAGTGGTGAAGTCC 61.050 66.667 10.83 0.00 0.00 3.85
1774 1961 2.280797 TGGCGCAGTGGTGAAGTC 60.281 61.111 10.83 0.00 0.00 3.01
1775 1962 2.281070 CTGGCGCAGTGGTGAAGT 60.281 61.111 10.83 0.00 0.00 3.01
1776 1963 3.052082 CCTGGCGCAGTGGTGAAG 61.052 66.667 10.83 0.00 0.00 3.02
1789 1976 3.333219 TTGAGAGGGCAGGCCTGG 61.333 66.667 33.46 15.81 36.10 4.45
1790 1977 2.045536 GTTGAGAGGGCAGGCCTG 60.046 66.667 29.34 29.34 36.10 4.85
1791 1978 2.204059 AGTTGAGAGGGCAGGCCT 60.204 61.111 17.36 17.36 36.10 5.19
1792 1979 1.846712 AAGAGTTGAGAGGGCAGGCC 61.847 60.000 4.33 4.33 0.00 5.19
1793 1980 0.905357 TAAGAGTTGAGAGGGCAGGC 59.095 55.000 0.00 0.00 0.00 4.85
1794 1981 1.208293 GGTAAGAGTTGAGAGGGCAGG 59.792 57.143 0.00 0.00 0.00 4.85
1795 1982 2.093764 CAGGTAAGAGTTGAGAGGGCAG 60.094 54.545 0.00 0.00 0.00 4.85
1796 1983 1.902508 CAGGTAAGAGTTGAGAGGGCA 59.097 52.381 0.00 0.00 0.00 5.36
1797 1984 1.903183 ACAGGTAAGAGTTGAGAGGGC 59.097 52.381 0.00 0.00 0.00 5.19
1798 1985 3.835395 AGAACAGGTAAGAGTTGAGAGGG 59.165 47.826 0.00 0.00 0.00 4.30
1799 1986 6.783708 ATAGAACAGGTAAGAGTTGAGAGG 57.216 41.667 0.00 0.00 0.00 3.69
1800 1987 8.402472 CACTATAGAACAGGTAAGAGTTGAGAG 58.598 40.741 6.78 0.00 0.00 3.20
1801 1988 8.107729 TCACTATAGAACAGGTAAGAGTTGAGA 58.892 37.037 6.78 0.00 0.00 3.27
1802 1989 8.185505 GTCACTATAGAACAGGTAAGAGTTGAG 58.814 40.741 6.78 0.00 0.00 3.02
1803 1990 7.668469 TGTCACTATAGAACAGGTAAGAGTTGA 59.332 37.037 6.78 0.00 0.00 3.18
1804 1991 7.827701 TGTCACTATAGAACAGGTAAGAGTTG 58.172 38.462 6.78 0.00 0.00 3.16
1805 1992 8.418597 TTGTCACTATAGAACAGGTAAGAGTT 57.581 34.615 6.78 0.00 0.00 3.01
1806 1993 8.596781 ATTGTCACTATAGAACAGGTAAGAGT 57.403 34.615 6.78 0.00 0.00 3.24
1835 2030 7.607607 AGTGTGTGTACATGTGTAATCAATCAT 59.392 33.333 9.11 0.00 39.39 2.45
1838 2033 7.161404 AGAGTGTGTGTACATGTGTAATCAAT 58.839 34.615 9.11 1.88 39.39 2.57
1839 2034 6.521162 AGAGTGTGTGTACATGTGTAATCAA 58.479 36.000 9.11 0.00 39.39 2.57
1844 2039 5.068591 ACAGAAGAGTGTGTGTACATGTGTA 59.931 40.000 9.11 0.00 39.39 2.90
1846 2041 4.371786 ACAGAAGAGTGTGTGTACATGTG 58.628 43.478 9.11 0.00 39.39 3.21
1847 2042 4.672587 ACAGAAGAGTGTGTGTACATGT 57.327 40.909 2.69 2.69 39.39 3.21
1848 2043 4.212004 CCAACAGAAGAGTGTGTGTACATG 59.788 45.833 0.00 0.00 39.39 3.21
1849 2044 4.380531 CCAACAGAAGAGTGTGTGTACAT 58.619 43.478 0.00 0.00 39.39 2.29
1850 2045 3.792401 CCAACAGAAGAGTGTGTGTACA 58.208 45.455 0.00 0.00 30.21 2.90
1851 2046 2.544267 GCCAACAGAAGAGTGTGTGTAC 59.456 50.000 0.00 0.00 30.21 2.90
1852 2047 2.169561 TGCCAACAGAAGAGTGTGTGTA 59.830 45.455 0.00 0.00 30.21 2.90
1853 2048 1.065491 TGCCAACAGAAGAGTGTGTGT 60.065 47.619 0.00 0.00 30.21 3.72
1854 2049 1.667236 TGCCAACAGAAGAGTGTGTG 58.333 50.000 0.00 0.00 30.21 3.82
1855 2050 2.418368 TTGCCAACAGAAGAGTGTGT 57.582 45.000 0.00 0.00 31.21 3.72
1856 2051 2.030540 CCATTGCCAACAGAAGAGTGTG 60.031 50.000 0.00 0.00 0.00 3.82
1857 2052 2.158623 TCCATTGCCAACAGAAGAGTGT 60.159 45.455 0.00 0.00 0.00 3.55
1858 2053 2.507484 TCCATTGCCAACAGAAGAGTG 58.493 47.619 0.00 0.00 0.00 3.51
1859 2054 2.957402 TCCATTGCCAACAGAAGAGT 57.043 45.000 0.00 0.00 0.00 3.24
1861 2056 2.726821 GGATCCATTGCCAACAGAAGA 58.273 47.619 6.95 0.00 0.00 2.87
1862 2057 1.402968 CGGATCCATTGCCAACAGAAG 59.597 52.381 13.41 0.00 0.00 2.85
1901 2097 8.394877 CAATACGTACATGAATACCAACACATT 58.605 33.333 0.00 0.00 0.00 2.71
1903 2099 7.097834 TCAATACGTACATGAATACCAACACA 58.902 34.615 9.75 0.00 0.00 3.72
1904 2100 7.528481 TCAATACGTACATGAATACCAACAC 57.472 36.000 9.75 0.00 0.00 3.32
1905 2101 8.549338 TTTCAATACGTACATGAATACCAACA 57.451 30.769 20.22 6.74 33.45 3.33
1906 2102 8.120465 CCTTTCAATACGTACATGAATACCAAC 58.880 37.037 20.22 0.00 33.45 3.77
1907 2103 7.825270 ACCTTTCAATACGTACATGAATACCAA 59.175 33.333 20.22 9.10 33.45 3.67
1908 2104 7.279090 CACCTTTCAATACGTACATGAATACCA 59.721 37.037 20.22 9.37 33.45 3.25
1909 2105 7.279313 ACACCTTTCAATACGTACATGAATACC 59.721 37.037 20.22 0.00 33.45 2.73
1921 2117 4.315803 AGAGGAACACACCTTTCAATACG 58.684 43.478 0.00 0.00 40.73 3.06
1922 2118 5.552178 AGAGAGGAACACACCTTTCAATAC 58.448 41.667 0.00 0.00 41.68 1.89
1923 2119 5.825593 AGAGAGGAACACACCTTTCAATA 57.174 39.130 0.00 0.00 41.68 1.90
1924 2120 4.713792 AGAGAGGAACACACCTTTCAAT 57.286 40.909 0.00 0.00 41.68 2.57
1931 2127 3.541632 TGTGAAAAGAGAGGAACACACC 58.458 45.455 0.00 0.00 34.19 4.16
2048 2246 2.672098 AGTGGGTAGCCATAGTCAGAG 58.328 52.381 18.29 0.00 0.00 3.35
2142 2340 1.818674 GGTGATGGACTGGCGATTTTT 59.181 47.619 0.00 0.00 0.00 1.94
2144 2342 0.620556 AGGTGATGGACTGGCGATTT 59.379 50.000 0.00 0.00 0.00 2.17
2217 2534 6.713450 GTGAATACACCACCGGGAAATTATAT 59.287 38.462 6.32 0.00 40.74 0.86
2229 2563 4.261801 AGCAATACAGTGAATACACCACC 58.738 43.478 0.00 0.00 46.99 4.61
2237 2571 8.209584 ACAGATATCAAGAGCAATACAGTGAAT 58.790 33.333 5.32 0.00 0.00 2.57
2241 2575 7.117285 TGACAGATATCAAGAGCAATACAGT 57.883 36.000 5.32 0.00 0.00 3.55
2242 2576 8.089597 AGATGACAGATATCAAGAGCAATACAG 58.910 37.037 5.32 0.00 30.82 2.74
2287 2622 6.126883 ACCCTCCATTACGAATTCACTATTCA 60.127 38.462 6.22 0.00 42.34 2.57
2317 2652 3.248602 GTGCCTACAATCCATTGACGATC 59.751 47.826 6.29 0.00 40.14 3.69
2334 2680 4.804868 TGCAAATATGTTTCATGTGCCT 57.195 36.364 0.00 0.00 36.03 4.75
2411 2757 9.809395 TCTGCACCCATATAGTATATAGTATCC 57.191 37.037 12.48 0.00 0.00 2.59
2471 2817 1.971357 AGAATTGTCTGACGGTCCAGT 59.029 47.619 5.55 0.00 35.71 4.00
2472 2818 2.611518 GAGAATTGTCTGACGGTCCAG 58.388 52.381 5.55 3.70 32.80 3.86
2483 2829 8.311836 TCCCCATAGATAAATACGAGAATTGTC 58.688 37.037 0.00 0.00 32.63 3.18
2501 2953 8.469309 AAATCATTGAATAGTGTTCCCCATAG 57.531 34.615 0.00 0.00 0.00 2.23
2795 3249 2.088423 ACTTTTCAGGCACGTTTCACA 58.912 42.857 0.00 0.00 0.00 3.58
2833 3294 5.630661 TTGAGTTTGAACGAGGAAACAAA 57.369 34.783 0.00 0.00 35.00 2.83
2950 3418 5.890985 TCTCTTTGGACCAGTCAAAATCAAA 59.109 36.000 0.89 1.05 32.54 2.69
3070 3945 4.682778 AATGCCATTAATCTGCAGCATT 57.317 36.364 9.47 10.70 43.92 3.56
3077 3952 9.276590 TGTCTGTCTTATAATGCCATTAATCTG 57.723 33.333 0.47 0.00 0.00 2.90
3093 3968 9.087424 CATATTCGAAGTTTGATGTCTGTCTTA 57.913 33.333 3.35 0.00 0.00 2.10
3282 4159 3.488678 CGCTCTGCTATCATGTAACACAG 59.511 47.826 0.00 0.00 0.00 3.66
3458 4335 1.725641 TGTTCTCGCTGGCATAACAG 58.274 50.000 0.00 0.00 41.41 3.16
3459 4336 2.009051 CATGTTCTCGCTGGCATAACA 58.991 47.619 0.00 6.77 34.81 2.41
3468 4345 0.603707 CCACACACCATGTTCTCGCT 60.604 55.000 0.00 0.00 40.64 4.93
3469 4346 0.884704 ACCACACACCATGTTCTCGC 60.885 55.000 0.00 0.00 40.64 5.03
3504 4381 4.097741 CACAATTGACCAAGTGACCTTCAA 59.902 41.667 13.59 0.00 38.53 2.69
3521 4398 8.650143 AGTAAACCAGGAATTACATCACAATT 57.350 30.769 16.99 0.00 35.06 2.32
3558 4439 6.257994 TCATCCAAGGATCTAAAAGCTGAT 57.742 37.500 0.00 0.00 31.62 2.90
3563 4444 8.348507 GCTACAAATCATCCAAGGATCTAAAAG 58.651 37.037 0.00 0.00 31.62 2.27
3580 4461 3.554934 TCCCATGGTGATGCTACAAATC 58.445 45.455 11.73 0.00 0.00 2.17
3608 4497 5.056894 ACTACACTCATTACCAAGACGTC 57.943 43.478 7.70 7.70 0.00 4.34
3615 4504 4.841813 TGAAAGGGACTACACTCATTACCA 59.158 41.667 0.00 0.00 38.49 3.25
3631 4520 3.131755 GCTTTCCAGATTCCATGAAAGGG 59.868 47.826 15.92 0.00 42.37 3.95
3709 4599 0.947244 GGACAGAAGGTGTTGCACAG 59.053 55.000 1.61 0.00 40.56 3.66
3717 4607 4.469945 TGGGAAGTATTAGGACAGAAGGTG 59.530 45.833 0.00 0.00 0.00 4.00
3731 4621 6.131264 TCTGAAATGAATGCATGGGAAGTAT 58.869 36.000 0.00 0.00 34.26 2.12
3743 4635 8.677871 TGAAACAATCGAATCTGAAATGAATG 57.322 30.769 0.00 0.00 0.00 2.67
3809 4701 1.080298 TGTGTGTCACCGAACAACAC 58.920 50.000 0.00 0.00 42.80 3.32
3812 4704 1.339247 ACCTTGTGTGTCACCGAACAA 60.339 47.619 0.00 4.03 32.73 2.83
3814 4706 2.228138 TACCTTGTGTGTCACCGAAC 57.772 50.000 0.00 0.00 32.73 3.95
3865 4757 6.762702 ACTAAAACCTCTTTCGGTCAAAAA 57.237 33.333 0.00 0.00 35.89 1.94
3866 4758 6.557110 CAACTAAAACCTCTTTCGGTCAAAA 58.443 36.000 0.00 0.00 35.89 2.44
3867 4759 5.449451 GCAACTAAAACCTCTTTCGGTCAAA 60.449 40.000 0.00 0.00 35.89 2.69
3868 4760 4.035909 GCAACTAAAACCTCTTTCGGTCAA 59.964 41.667 0.00 0.00 35.89 3.18
3869 4761 3.562557 GCAACTAAAACCTCTTTCGGTCA 59.437 43.478 0.00 0.00 35.89 4.02
3870 4762 3.562557 TGCAACTAAAACCTCTTTCGGTC 59.437 43.478 0.00 0.00 35.89 4.79
3871 4763 3.547746 TGCAACTAAAACCTCTTTCGGT 58.452 40.909 0.00 0.00 39.48 4.69
3872 4764 3.813166 TCTGCAACTAAAACCTCTTTCGG 59.187 43.478 0.00 0.00 0.00 4.30
3873 4765 5.418310 TTCTGCAACTAAAACCTCTTTCG 57.582 39.130 0.00 0.00 0.00 3.46
3874 4766 8.023706 CCTATTTCTGCAACTAAAACCTCTTTC 58.976 37.037 0.00 0.00 0.00 2.62
3875 4767 7.505923 ACCTATTTCTGCAACTAAAACCTCTTT 59.494 33.333 0.00 0.00 0.00 2.52
3876 4768 7.004691 ACCTATTTCTGCAACTAAAACCTCTT 58.995 34.615 0.00 0.00 0.00 2.85
3909 4801 3.068024 TGGTTTTCATCAAGACTTGCCAC 59.932 43.478 10.50 1.05 0.00 5.01
3950 4842 3.888930 CAGTTAAACCCCTTTGAGAAGCA 59.111 43.478 0.00 0.00 0.00 3.91
3951 4843 4.142038 TCAGTTAAACCCCTTTGAGAAGC 58.858 43.478 0.00 0.00 0.00 3.86
3952 4844 5.183904 CCATCAGTTAAACCCCTTTGAGAAG 59.816 44.000 0.00 0.00 0.00 2.85
3953 4845 5.076873 CCATCAGTTAAACCCCTTTGAGAA 58.923 41.667 0.00 0.00 0.00 2.87
3955 4847 3.763897 CCCATCAGTTAAACCCCTTTGAG 59.236 47.826 0.00 0.00 0.00 3.02
3956 4848 3.141272 ACCCATCAGTTAAACCCCTTTGA 59.859 43.478 0.00 0.00 0.00 2.69
3998 4891 6.566141 TCTGCTTGCAATTGTATACGTACTA 58.434 36.000 7.40 0.00 0.00 1.82
4001 4894 6.045955 TCATCTGCTTGCAATTGTATACGTA 58.954 36.000 7.40 0.00 0.00 3.57
4002 4895 4.875536 TCATCTGCTTGCAATTGTATACGT 59.124 37.500 7.40 0.00 0.00 3.57
4003 4896 5.408204 TCATCTGCTTGCAATTGTATACG 57.592 39.130 7.40 0.00 0.00 3.06
4017 4912 1.749634 GCATCTGGCTTTTCATCTGCT 59.250 47.619 0.00 0.00 40.25 4.24
4019 4914 2.865343 GGCATCTGGCTTTTCATCTG 57.135 50.000 0.00 0.00 44.01 2.90
4071 4971 9.685276 ATGAATGTGTATCAAGAATGGAAACTA 57.315 29.630 0.00 0.00 0.00 2.24
4088 4988 0.330604 AGGCTCTGGCATGAATGTGT 59.669 50.000 0.00 0.00 40.87 3.72
4135 5036 1.259609 TTACCACGAACCCGAGACAT 58.740 50.000 0.00 0.00 39.50 3.06
4202 5103 7.641249 AGGAGTATGTAACAGTAGTAGGAAGT 58.359 38.462 0.00 0.00 0.00 3.01
4216 5119 7.282224 GCAATGGTCAATTGTAGGAGTATGTAA 59.718 37.037 5.13 0.00 46.37 2.41
4221 5124 5.435686 AGCAATGGTCAATTGTAGGAGTA 57.564 39.130 5.13 0.00 46.37 2.59
4222 5125 4.307032 AGCAATGGTCAATTGTAGGAGT 57.693 40.909 5.13 0.00 46.37 3.85
4223 5126 4.701651 TCAAGCAATGGTCAATTGTAGGAG 59.298 41.667 5.13 0.00 46.37 3.69
4224 5127 4.661222 TCAAGCAATGGTCAATTGTAGGA 58.339 39.130 5.13 0.00 46.37 2.94
4225 5128 5.587388 ATCAAGCAATGGTCAATTGTAGG 57.413 39.130 5.13 0.00 46.37 3.18
4226 5129 9.590451 AATAAATCAAGCAATGGTCAATTGTAG 57.410 29.630 5.13 0.00 46.37 2.74
4282 5195 6.745159 ATGACTCGCTCGTTCAGTATATAT 57.255 37.500 0.00 0.00 0.00 0.86
4283 5196 6.427242 AGAATGACTCGCTCGTTCAGTATATA 59.573 38.462 13.99 0.00 44.57 0.86
4284 5197 5.239744 AGAATGACTCGCTCGTTCAGTATAT 59.760 40.000 13.99 0.00 44.57 0.86
4285 5198 4.575236 AGAATGACTCGCTCGTTCAGTATA 59.425 41.667 13.99 0.00 44.57 1.47
4286 5199 3.378742 AGAATGACTCGCTCGTTCAGTAT 59.621 43.478 13.99 0.00 44.57 2.12
4287 5200 2.747989 AGAATGACTCGCTCGTTCAGTA 59.252 45.455 13.99 0.00 44.57 2.74
4288 5201 1.542030 AGAATGACTCGCTCGTTCAGT 59.458 47.619 13.99 0.00 44.57 3.41
4322 5235 1.153086 GAGGCCTCATGATGCGGTT 60.153 57.895 28.43 5.18 0.00 4.44
4400 5313 1.763655 TCATCCCATCTCAGCGCCT 60.764 57.895 2.29 0.00 0.00 5.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.