Multiple sequence alignment - TraesCS7B01G342600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G342600 chr7B 100.000 3464 0 0 1 3464 597680049 597683512 0.000000e+00 6397.0
1 TraesCS7B01G342600 chr7D 92.474 2352 104 15 537 2844 552927881 552930203 0.000000e+00 3295.0
2 TraesCS7B01G342600 chr7D 94.866 448 19 3 1 444 615960054 615960501 0.000000e+00 697.0
3 TraesCS7B01G342600 chr7D 76.996 739 145 17 1597 2315 610420906 610420173 1.940000e-107 399.0
4 TraesCS7B01G342600 chr7D 90.643 171 13 3 3002 3170 552931330 552931499 1.250000e-54 224.0
5 TraesCS7B01G342600 chr6D 94.690 452 22 2 1 450 36632960 36632509 0.000000e+00 701.0
6 TraesCS7B01G342600 chr6D 92.428 449 26 5 1 444 121805247 121805692 4.880000e-178 634.0
7 TraesCS7B01G342600 chr3D 93.617 470 26 4 1 468 548679554 548679087 0.000000e+00 699.0
8 TraesCS7B01G342600 chr2D 94.196 448 22 3 1 444 28076691 28077138 0.000000e+00 680.0
9 TraesCS7B01G342600 chr2D 95.349 43 2 0 431 473 36787852 36787810 6.200000e-08 69.4
10 TraesCS7B01G342600 chrUn 93.274 446 26 4 1 444 23380748 23381191 0.000000e+00 654.0
11 TraesCS7B01G342600 chrUn 92.920 452 28 4 1 450 364863074 364862625 0.000000e+00 654.0
12 TraesCS7B01G342600 chrUn 92.825 446 28 4 1 444 23377108 23377551 0.000000e+00 643.0
13 TraesCS7B01G342600 chr2B 92.731 454 28 4 1 450 474345719 474345267 0.000000e+00 651.0
14 TraesCS7B01G342600 chr5A 77.564 780 145 19 1581 2338 87417197 87416426 8.820000e-121 444.0
15 TraesCS7B01G342600 chr5D 76.864 778 154 19 1581 2338 93862379 93861608 1.920000e-112 416.0
16 TraesCS7B01G342600 chr5D 76.295 772 156 20 1588 2338 3633470 3634235 1.510000e-103 387.0
17 TraesCS7B01G342600 chr5D 76.630 736 149 16 1597 2313 3660238 3659507 5.420000e-103 385.0
18 TraesCS7B01G342600 chr5B 76.864 778 153 18 1581 2338 98845688 98844918 6.920000e-112 414.0
19 TraesCS7B01G342600 chr5B 76.340 765 150 20 1597 2338 5072359 5071603 7.020000e-102 381.0
20 TraesCS7B01G342600 chr7A 76.495 736 154 13 1597 2315 700338722 700339455 1.950000e-102 383.0
21 TraesCS7B01G342600 chr1B 79.100 311 60 4 2023 2330 470716992 470716684 3.500000e-50 209.0
22 TraesCS7B01G342600 chr1B 96.875 32 1 0 436 467 531598980 531599011 2.000000e-03 54.7
23 TraesCS7B01G342600 chr1A 78.778 311 61 5 2023 2330 449519127 449518819 1.630000e-48 204.0
24 TraesCS7B01G342600 chr6A 81.000 200 38 0 2021 2220 613660865 613661064 3.580000e-35 159.0
25 TraesCS7B01G342600 chr4B 97.561 41 1 0 431 471 502075516 502075476 1.720000e-08 71.3
26 TraesCS7B01G342600 chr2A 90.566 53 3 2 431 482 762705407 762705356 6.200000e-08 69.4
27 TraesCS7B01G342600 chr4D 97.222 36 1 0 436 471 64474869 64474904 1.040000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G342600 chr7B 597680049 597683512 3463 False 6397.0 6397 100.0000 1 3464 1 chr7B.!!$F1 3463
1 TraesCS7B01G342600 chr7D 552927881 552931499 3618 False 1759.5 3295 91.5585 537 3170 2 chr7D.!!$F2 2633
2 TraesCS7B01G342600 chr7D 610420173 610420906 733 True 399.0 399 76.9960 1597 2315 1 chr7D.!!$R1 718
3 TraesCS7B01G342600 chrUn 23377108 23381191 4083 False 648.5 654 93.0495 1 444 2 chrUn.!!$F1 443
4 TraesCS7B01G342600 chr5A 87416426 87417197 771 True 444.0 444 77.5640 1581 2338 1 chr5A.!!$R1 757
5 TraesCS7B01G342600 chr5D 93861608 93862379 771 True 416.0 416 76.8640 1581 2338 1 chr5D.!!$R2 757
6 TraesCS7B01G342600 chr5D 3633470 3634235 765 False 387.0 387 76.2950 1588 2338 1 chr5D.!!$F1 750
7 TraesCS7B01G342600 chr5D 3659507 3660238 731 True 385.0 385 76.6300 1597 2313 1 chr5D.!!$R1 716
8 TraesCS7B01G342600 chr5B 98844918 98845688 770 True 414.0 414 76.8640 1581 2338 1 chr5B.!!$R2 757
9 TraesCS7B01G342600 chr5B 5071603 5072359 756 True 381.0 381 76.3400 1597 2338 1 chr5B.!!$R1 741
10 TraesCS7B01G342600 chr7A 700338722 700339455 733 False 383.0 383 76.4950 1597 2315 1 chr7A.!!$F1 718

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
453 4095 0.034477 CAACCGGGACAATAGGCCTT 60.034 55.0 12.58 0.0 0.00 4.35 F
490 4132 0.041663 CTCTCCTCGCGACGAAGATC 60.042 60.0 3.71 0.0 34.74 2.75 F
492 4134 0.098905 CTCCTCGCGACGAAGATCAA 59.901 55.0 3.71 0.0 34.74 2.57 F
496 4138 0.179137 TCGCGACGAAGATCAATGCT 60.179 50.0 3.71 0.0 31.06 3.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1528 5214 1.524621 CCATGGTGGCGATGAGACC 60.525 63.158 2.57 0.00 0.00 3.85 R
1698 5384 2.231478 GTCTGAGTAGTACTGCTTGCCA 59.769 50.000 15.09 7.69 0.00 4.92 R
2115 5822 2.265739 GCTGGGTCGAGCATGTCA 59.734 61.111 17.59 4.02 38.95 3.58 R
2467 6174 3.454812 AGAAATAGGCCGGTATGACAGTT 59.545 43.478 1.90 0.00 0.00 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 46 7.784633 TTTTGAATTTTGGTCAAATCTGGTC 57.215 32.000 0.81 0.00 42.82 4.02
49 50 6.760770 TGAATTTTGGTCAAATCTGGTCAAAC 59.239 34.615 0.00 0.00 33.60 2.93
51 52 7.595819 ATTTTGGTCAAATCTGGTCAAACTA 57.404 32.000 0.00 0.00 27.71 2.24
156 3797 6.455360 AACTCAAACAGTGAAATGTGTGAT 57.545 33.333 4.37 0.00 44.46 3.06
180 3821 4.847198 TCATGCTCAAGCTAAATTCCTGA 58.153 39.130 3.32 0.00 42.66 3.86
221 3862 8.553459 ACATCTTACTATTGTCAGGAAAACAG 57.447 34.615 0.00 0.00 0.00 3.16
231 3872 1.677576 CAGGAAAACAGCAAGTGCAGA 59.322 47.619 6.00 0.00 45.16 4.26
235 3876 3.315191 GGAAAACAGCAAGTGCAGACTTA 59.685 43.478 6.00 0.00 40.68 2.24
236 3877 4.202010 GGAAAACAGCAAGTGCAGACTTAA 60.202 41.667 6.00 0.00 40.68 1.85
241 3882 3.725740 CAGCAAGTGCAGACTTAAAAACG 59.274 43.478 6.00 0.00 40.68 3.60
256 3897 6.877855 ACTTAAAAACGAGGGAGAATAGAACC 59.122 38.462 0.00 0.00 0.00 3.62
278 3919 2.143925 GAAAGTTAAGCGTGCTCAGGT 58.856 47.619 0.00 0.00 0.00 4.00
296 3937 4.229812 TCAGGTTGGAGTAGTGAGAGGATA 59.770 45.833 0.00 0.00 0.00 2.59
325 3966 3.555956 CGTCCGGGAAGTTAGATGATTTG 59.444 47.826 0.00 0.00 0.00 2.32
347 3988 4.915809 TGGAATGATGAGGGGTGATTAGAT 59.084 41.667 0.00 0.00 0.00 1.98
444 4086 1.451072 GGTGTTACCAACCGGGACA 59.549 57.895 6.32 0.00 38.42 4.02
445 4087 0.179023 GGTGTTACCAACCGGGACAA 60.179 55.000 6.32 0.00 38.42 3.18
446 4088 1.546099 GGTGTTACCAACCGGGACAAT 60.546 52.381 6.32 0.00 38.42 2.71
447 4089 2.290197 GGTGTTACCAACCGGGACAATA 60.290 50.000 6.32 0.00 38.42 1.90
448 4090 3.004862 GTGTTACCAACCGGGACAATAG 58.995 50.000 6.32 0.00 41.15 1.73
449 4091 2.027007 TGTTACCAACCGGGACAATAGG 60.027 50.000 6.32 0.00 41.15 2.57
450 4092 0.542805 TACCAACCGGGACAATAGGC 59.457 55.000 6.32 0.00 41.15 3.93
451 4093 1.453197 CCAACCGGGACAATAGGCC 60.453 63.158 6.32 0.00 40.01 5.19
452 4094 1.607612 CAACCGGGACAATAGGCCT 59.392 57.895 11.78 11.78 0.00 5.19
453 4095 0.034477 CAACCGGGACAATAGGCCTT 60.034 55.000 12.58 0.00 0.00 4.35
454 4096 0.702316 AACCGGGACAATAGGCCTTT 59.298 50.000 12.58 0.00 0.00 3.11
455 4097 0.702316 ACCGGGACAATAGGCCTTTT 59.298 50.000 12.58 6.60 0.00 2.27
456 4098 1.076513 ACCGGGACAATAGGCCTTTTT 59.923 47.619 12.58 1.93 0.00 1.94
476 4118 6.527057 TTTTTCTACTAGTGGTAGCTCTCC 57.473 41.667 5.39 0.00 45.46 3.71
477 4119 5.453866 TTTCTACTAGTGGTAGCTCTCCT 57.546 43.478 5.39 0.00 45.46 3.69
478 4120 4.693042 TCTACTAGTGGTAGCTCTCCTC 57.307 50.000 5.39 5.82 45.46 3.71
479 4121 2.335316 ACTAGTGGTAGCTCTCCTCG 57.665 55.000 0.00 0.00 0.00 4.63
480 4122 0.948678 CTAGTGGTAGCTCTCCTCGC 59.051 60.000 0.00 0.00 0.00 5.03
481 4123 0.814410 TAGTGGTAGCTCTCCTCGCG 60.814 60.000 0.00 0.00 0.00 5.87
482 4124 2.113433 GTGGTAGCTCTCCTCGCGA 61.113 63.158 9.26 9.26 0.00 5.87
483 4125 2.113433 TGGTAGCTCTCCTCGCGAC 61.113 63.158 3.71 0.00 33.11 5.19
484 4126 2.325166 GTAGCTCTCCTCGCGACG 59.675 66.667 3.71 0.39 0.00 5.12
485 4127 2.172372 GTAGCTCTCCTCGCGACGA 61.172 63.158 3.71 6.10 0.00 4.20
486 4128 1.449070 TAGCTCTCCTCGCGACGAA 60.449 57.895 3.71 0.00 34.74 3.85
487 4129 1.429927 TAGCTCTCCTCGCGACGAAG 61.430 60.000 3.71 8.56 34.74 3.79
488 4130 2.751913 GCTCTCCTCGCGACGAAGA 61.752 63.158 3.71 7.45 34.74 2.87
489 4131 2.018544 CTCTCCTCGCGACGAAGAT 58.981 57.895 3.71 0.00 34.74 2.40
490 4132 0.041663 CTCTCCTCGCGACGAAGATC 60.042 60.000 3.71 0.00 34.74 2.75
491 4133 0.743345 TCTCCTCGCGACGAAGATCA 60.743 55.000 3.71 0.00 34.74 2.92
492 4134 0.098905 CTCCTCGCGACGAAGATCAA 59.901 55.000 3.71 0.00 34.74 2.57
493 4135 0.738975 TCCTCGCGACGAAGATCAAT 59.261 50.000 3.71 0.00 34.74 2.57
494 4136 0.848942 CCTCGCGACGAAGATCAATG 59.151 55.000 3.71 0.00 34.74 2.82
495 4137 0.228238 CTCGCGACGAAGATCAATGC 59.772 55.000 3.71 0.00 34.74 3.56
496 4138 0.179137 TCGCGACGAAGATCAATGCT 60.179 50.000 3.71 0.00 31.06 3.79
497 4139 0.228238 CGCGACGAAGATCAATGCTC 59.772 55.000 0.00 0.00 0.00 4.26
498 4140 0.228238 GCGACGAAGATCAATGCTCG 59.772 55.000 0.00 0.00 0.00 5.03
499 4141 0.228238 CGACGAAGATCAATGCTCGC 59.772 55.000 0.00 0.00 0.00 5.03
500 4142 1.565305 GACGAAGATCAATGCTCGCT 58.435 50.000 0.00 0.00 0.00 4.93
501 4143 1.929836 GACGAAGATCAATGCTCGCTT 59.070 47.619 0.00 0.00 0.00 4.68
502 4144 1.929836 ACGAAGATCAATGCTCGCTTC 59.070 47.619 0.00 0.00 33.45 3.86
503 4145 1.260033 CGAAGATCAATGCTCGCTTCC 59.740 52.381 0.00 0.00 33.26 3.46
504 4146 2.559440 GAAGATCAATGCTCGCTTCCT 58.441 47.619 0.00 0.00 31.24 3.36
505 4147 2.706339 AGATCAATGCTCGCTTCCTT 57.294 45.000 0.00 0.00 0.00 3.36
506 4148 3.827008 AGATCAATGCTCGCTTCCTTA 57.173 42.857 0.00 0.00 0.00 2.69
507 4149 4.348863 AGATCAATGCTCGCTTCCTTAT 57.651 40.909 0.00 0.00 0.00 1.73
508 4150 4.063689 AGATCAATGCTCGCTTCCTTATG 58.936 43.478 0.00 0.00 0.00 1.90
509 4151 3.541996 TCAATGCTCGCTTCCTTATGA 57.458 42.857 0.00 0.00 0.00 2.15
510 4152 3.872696 TCAATGCTCGCTTCCTTATGAA 58.127 40.909 0.00 0.00 0.00 2.57
511 4153 4.260985 TCAATGCTCGCTTCCTTATGAAA 58.739 39.130 0.00 0.00 31.06 2.69
512 4154 4.883585 TCAATGCTCGCTTCCTTATGAAAT 59.116 37.500 0.00 0.00 31.06 2.17
513 4155 6.054941 TCAATGCTCGCTTCCTTATGAAATA 58.945 36.000 0.00 0.00 31.06 1.40
514 4156 6.712095 TCAATGCTCGCTTCCTTATGAAATAT 59.288 34.615 0.00 0.00 31.06 1.28
515 4157 5.929697 TGCTCGCTTCCTTATGAAATATG 57.070 39.130 0.00 0.00 31.06 1.78
516 4158 5.610398 TGCTCGCTTCCTTATGAAATATGA 58.390 37.500 0.00 0.00 31.06 2.15
517 4159 5.466728 TGCTCGCTTCCTTATGAAATATGAC 59.533 40.000 0.00 0.00 31.06 3.06
518 4160 5.698545 GCTCGCTTCCTTATGAAATATGACT 59.301 40.000 0.00 0.00 31.06 3.41
519 4161 6.128688 GCTCGCTTCCTTATGAAATATGACTC 60.129 42.308 0.00 0.00 31.06 3.36
520 4162 7.055667 TCGCTTCCTTATGAAATATGACTCT 57.944 36.000 0.00 0.00 31.06 3.24
521 4163 6.925718 TCGCTTCCTTATGAAATATGACTCTG 59.074 38.462 0.00 0.00 31.06 3.35
522 4164 6.146837 CGCTTCCTTATGAAATATGACTCTGG 59.853 42.308 0.00 0.00 31.06 3.86
523 4165 7.220030 GCTTCCTTATGAAATATGACTCTGGA 58.780 38.462 0.00 0.00 31.06 3.86
524 4166 7.387397 GCTTCCTTATGAAATATGACTCTGGAG 59.613 40.741 0.00 0.00 31.06 3.86
525 4167 7.308450 TCCTTATGAAATATGACTCTGGAGG 57.692 40.000 2.58 0.00 0.00 4.30
526 4168 5.936956 CCTTATGAAATATGACTCTGGAGGC 59.063 44.000 2.58 0.00 36.85 4.70
535 4177 2.625314 TGACTCTGGAGGCATCTATTCG 59.375 50.000 1.50 0.00 42.59 3.34
536 4178 2.887783 GACTCTGGAGGCATCTATTCGA 59.112 50.000 0.00 0.00 36.17 3.71
537 4179 2.890311 ACTCTGGAGGCATCTATTCGAG 59.110 50.000 0.00 0.00 0.00 4.04
538 4180 3.153130 CTCTGGAGGCATCTATTCGAGA 58.847 50.000 0.00 0.00 39.01 4.04
539 4181 3.763360 CTCTGGAGGCATCTATTCGAGAT 59.237 47.826 0.00 0.00 46.52 2.75
555 4197 2.351253 CGAGATGCTCTAAGGTGGATCG 60.351 54.545 0.00 0.00 38.31 3.69
586 4228 0.250124 AGATGCGGTGGTTTTGTCGA 60.250 50.000 0.00 0.00 0.00 4.20
596 4239 5.276868 CGGTGGTTTTGTCGATCTTCATATC 60.277 44.000 0.00 0.00 0.00 1.63
614 4257 1.496060 TCGTGGCCCTCAATAGATGT 58.504 50.000 0.00 0.00 0.00 3.06
615 4258 1.837439 TCGTGGCCCTCAATAGATGTT 59.163 47.619 0.00 0.00 0.00 2.71
617 4260 2.680805 CGTGGCCCTCAATAGATGTTGT 60.681 50.000 0.00 0.00 0.00 3.32
639 4282 3.871574 GTGTGCGTTGGTGCGTGT 61.872 61.111 0.00 0.00 37.81 4.49
646 4290 4.920112 TTGGTGCGTGTGACCCGG 62.920 66.667 0.00 0.00 31.84 5.73
660 4304 0.834687 ACCCGGTGGTGTGACTGTAT 60.835 55.000 0.00 0.00 45.58 2.29
661 4305 1.187974 CCCGGTGGTGTGACTGTATA 58.812 55.000 0.00 0.00 0.00 1.47
662 4306 1.760613 CCCGGTGGTGTGACTGTATAT 59.239 52.381 0.00 0.00 0.00 0.86
663 4307 2.483013 CCCGGTGGTGTGACTGTATATG 60.483 54.545 0.00 0.00 0.00 1.78
664 4308 2.201732 CGGTGGTGTGACTGTATATGC 58.798 52.381 0.00 0.00 0.00 3.14
665 4309 2.159099 CGGTGGTGTGACTGTATATGCT 60.159 50.000 0.00 0.00 0.00 3.79
666 4310 3.198068 GGTGGTGTGACTGTATATGCTG 58.802 50.000 0.00 0.00 0.00 4.41
667 4311 3.118775 GGTGGTGTGACTGTATATGCTGA 60.119 47.826 4.74 0.00 0.00 4.26
668 4312 3.865745 GTGGTGTGACTGTATATGCTGAC 59.134 47.826 4.74 0.00 0.00 3.51
669 4313 3.116300 GGTGTGACTGTATATGCTGACG 58.884 50.000 4.74 0.00 0.00 4.35
670 4314 3.428999 GGTGTGACTGTATATGCTGACGT 60.429 47.826 4.74 0.00 0.00 4.34
671 4315 3.547868 GTGTGACTGTATATGCTGACGTG 59.452 47.826 0.00 0.00 0.00 4.49
672 4316 3.116300 GTGACTGTATATGCTGACGTGG 58.884 50.000 0.00 0.00 0.00 4.94
673 4317 2.100749 TGACTGTATATGCTGACGTGGG 59.899 50.000 0.00 0.00 0.00 4.61
705 4349 6.310149 AGAAAAATCCTGATGGACTTGTTCT 58.690 36.000 0.00 0.00 46.51 3.01
756 4400 7.466725 GCCTATGAATAATTTTCAGTACGTGCA 60.467 37.037 6.38 0.00 0.00 4.57
811 4455 6.530534 ACTTGTCGTCTAATTAATTCCACGAG 59.469 38.462 24.33 18.27 35.76 4.18
815 4459 6.414402 GTCGTCTAATTAATTCCACGAGACTC 59.586 42.308 24.33 14.59 35.76 3.36
825 4469 2.341101 ACGAGACTCCGGCGACATT 61.341 57.895 9.30 0.00 0.00 2.71
831 4475 1.218047 CTCCGGCGACATTTCCTCA 59.782 57.895 9.30 0.00 0.00 3.86
860 4504 2.100631 GGAACCATCCGCTGTGTCG 61.101 63.158 0.00 0.00 35.59 4.35
875 4545 0.741915 TGTCGTCAGCCGTATATGCA 59.258 50.000 0.00 0.00 37.94 3.96
878 4548 1.339929 TCGTCAGCCGTATATGCATGT 59.660 47.619 10.16 5.06 37.94 3.21
892 4562 0.999406 GCATGTGTTACTGACGCGAT 59.001 50.000 15.93 0.00 41.73 4.58
932 4602 2.004017 TGCGGTTGCTTTATAAGTCGG 58.996 47.619 0.00 0.00 43.34 4.79
936 4606 3.256558 GGTTGCTTTATAAGTCGGTCGT 58.743 45.455 0.00 0.00 0.00 4.34
948 4618 3.771160 GGTCGTGACCGAGGCCAT 61.771 66.667 5.01 0.00 45.26 4.40
950 4620 1.810030 GTCGTGACCGAGGCCATTC 60.810 63.158 5.01 0.00 45.26 2.67
1080 4766 1.227823 CGTGTGGTCCTGCTCCAAA 60.228 57.895 0.00 0.00 36.68 3.28
1185 4871 0.904865 AGGTCACCATCTCCGAGCAA 60.905 55.000 0.00 0.00 0.00 3.91
1206 4892 4.415332 GACGAGCAGTTCCGCCGA 62.415 66.667 0.00 0.00 32.31 5.54
1243 4929 1.828660 ATCTCCGCCTACCTCACCG 60.829 63.158 0.00 0.00 0.00 4.94
1429 5115 1.985116 GTCGTCAGCCTCTTCCCCT 60.985 63.158 0.00 0.00 0.00 4.79
1430 5116 0.683504 GTCGTCAGCCTCTTCCCCTA 60.684 60.000 0.00 0.00 0.00 3.53
1653 5339 3.011517 AAGCTCGCCATGGACCCT 61.012 61.111 18.40 2.10 0.00 4.34
1673 5359 4.202305 CCCTGACCATAAGAAGGAGATCAC 60.202 50.000 0.00 0.00 30.92 3.06
1698 5384 1.071385 GATCTGGAGGCGTTCATGGAT 59.929 52.381 0.00 0.00 0.00 3.41
1785 5471 1.666553 CACGGGCAAGTCAACGCTA 60.667 57.895 0.00 0.00 0.00 4.26
2070 5777 3.936203 GTGGACGGGCTGTGGTCA 61.936 66.667 2.25 0.00 34.87 4.02
2115 5822 2.124653 TTCACCACCAACCGCGTT 60.125 55.556 4.92 0.00 0.00 4.84
2348 6055 2.631427 GGAGGGACGACTCCGATAG 58.369 63.158 9.17 0.00 46.81 2.08
2439 6146 1.577736 CCAGGAGGGAATCAGTGACT 58.422 55.000 0.00 0.00 40.01 3.41
2467 6174 2.343101 CCGCCGTGAAACTTTGAGATA 58.657 47.619 0.00 0.00 31.75 1.98
2507 6214 1.496857 TCTTGGTGATGTTTGTCCCCA 59.503 47.619 0.00 0.00 0.00 4.96
2569 6276 6.232139 AGTTTTCAATACCGTCGTAAAAGG 57.768 37.500 0.00 0.00 0.00 3.11
2571 6278 2.620242 TCAATACCGTCGTAAAAGGCC 58.380 47.619 0.00 0.00 0.00 5.19
2572 6279 2.028294 TCAATACCGTCGTAAAAGGCCA 60.028 45.455 5.01 0.00 0.00 5.36
2574 6281 0.968405 TACCGTCGTAAAAGGCCACT 59.032 50.000 5.01 0.00 0.00 4.00
2596 6303 2.126031 GGTTCGGAGTGGCTCGAC 60.126 66.667 0.00 0.00 34.99 4.20
2606 6313 4.803426 GGCTCGACTGCCGGTGAG 62.803 72.222 1.90 1.59 43.74 3.51
2611 6318 1.215382 CGACTGCCGGTGAGAATCA 59.785 57.895 1.90 0.00 37.44 2.57
2612 6319 2.765391 TCGACTGCCGGTGAGAATCAA 61.765 52.381 1.90 0.00 42.08 2.57
2630 6337 4.898829 TCAATGCCGATTTTAGTCATGG 57.101 40.909 0.00 0.00 0.00 3.66
2632 6339 1.013596 TGCCGATTTTAGTCATGGCG 58.986 50.000 0.00 0.00 45.34 5.69
2639 6346 1.934589 TTTAGTCATGGCGGACGATG 58.065 50.000 0.00 0.00 42.62 3.84
2640 6347 1.107945 TTAGTCATGGCGGACGATGA 58.892 50.000 0.00 0.00 42.62 2.92
2656 6363 2.727798 CGATGACGGTGTTTTAGACGTT 59.272 45.455 0.00 0.00 39.95 3.99
2657 6364 3.913763 CGATGACGGTGTTTTAGACGTTA 59.086 43.478 0.00 0.00 39.95 3.18
2667 6374 7.073883 GGTGTTTTAGACGTTATTTCCTTGTC 58.926 38.462 0.00 0.00 0.00 3.18
2705 6412 0.892755 ATTGTCGTTACCTCGCTCCA 59.107 50.000 0.00 0.00 0.00 3.86
2706 6413 0.892755 TTGTCGTTACCTCGCTCCAT 59.107 50.000 0.00 0.00 0.00 3.41
2708 6415 0.739561 GTCGTTACCTCGCTCCATCT 59.260 55.000 0.00 0.00 0.00 2.90
2718 6425 1.814772 CGCTCCATCTGCTCTAGGGG 61.815 65.000 0.00 0.00 0.00 4.79
2721 6428 2.402564 CTCCATCTGCTCTAGGGGAAA 58.597 52.381 0.00 0.00 32.36 3.13
2740 6447 2.480642 ACCCTAGATCTTGGTCTCCC 57.519 55.000 19.95 0.00 0.00 4.30
2741 6448 1.062044 ACCCTAGATCTTGGTCTCCCC 60.062 57.143 19.95 0.00 0.00 4.81
2746 6453 1.062886 AGATCTTGGTCTCCCCGATCA 60.063 52.381 13.03 0.00 38.32 2.92
2765 6472 2.766263 TCAGATGATAACGGTGCCTTCT 59.234 45.455 0.00 0.00 0.00 2.85
2771 6478 0.753867 TAACGGTGCCTTCTGTGTCA 59.246 50.000 0.00 0.00 0.00 3.58
2776 6483 2.353704 CGGTGCCTTCTGTGTCATTCTA 60.354 50.000 0.00 0.00 0.00 2.10
2780 6487 2.027192 GCCTTCTGTGTCATTCTACCCA 60.027 50.000 0.00 0.00 0.00 4.51
2801 6508 2.573340 GGGCATGGTTTTGGAGCG 59.427 61.111 0.00 0.00 0.00 5.03
2820 6527 2.647297 GTGCTGCTTGAAGGTGCC 59.353 61.111 0.00 0.00 0.00 5.01
2825 6532 1.321474 CTGCTTGAAGGTGCCAAGAA 58.679 50.000 7.02 0.00 42.57 2.52
2827 6534 1.322442 GCTTGAAGGTGCCAAGAAGT 58.678 50.000 7.02 0.00 42.57 3.01
2842 6549 5.389859 CAAGAAGTGGAATGGTATTTGCA 57.610 39.130 0.00 0.00 0.00 4.08
2850 6761 3.502211 GGAATGGTATTTGCATAGACCGG 59.498 47.826 14.93 0.00 34.49 5.28
2868 6779 1.664965 GTTTGTGCTCTCGGCTCGT 60.665 57.895 0.00 0.00 42.39 4.18
2869 6780 1.372997 TTTGTGCTCTCGGCTCGTC 60.373 57.895 0.00 0.00 42.39 4.20
2875 6786 4.710167 TCTCGGCTCGTCGTGGGA 62.710 66.667 0.00 0.00 0.00 4.37
2918 6829 2.518112 ATGGTGTGCGTTGGTGCA 60.518 55.556 0.00 0.00 43.95 4.57
2924 6835 3.911137 TGCGTTGGTGCAAGTTCA 58.089 50.000 0.00 0.00 43.02 3.18
2927 6838 0.664166 GCGTTGGTGCAAGTTCATGG 60.664 55.000 0.00 0.00 34.15 3.66
2949 6860 4.941263 GGCACATCATCAAACTTGTAGGTA 59.059 41.667 0.00 0.00 0.00 3.08
2950 6861 5.163754 GGCACATCATCAAACTTGTAGGTAC 60.164 44.000 0.00 0.00 0.00 3.34
2951 6862 5.445939 GCACATCATCAAACTTGTAGGTACG 60.446 44.000 0.00 0.00 0.00 3.67
2952 6863 5.063438 CACATCATCAAACTTGTAGGTACGG 59.937 44.000 0.00 0.00 0.00 4.02
2953 6864 4.877378 TCATCAAACTTGTAGGTACGGT 57.123 40.909 0.00 0.00 0.00 4.83
2960 6871 1.739466 CTTGTAGGTACGGTGTAGCGA 59.261 52.381 10.67 0.00 0.00 4.93
2961 6872 1.086696 TGTAGGTACGGTGTAGCGAC 58.913 55.000 10.67 10.97 0.00 5.19
2995 6906 2.191128 AGATGACTTCAGGTTGCACC 57.809 50.000 0.00 0.00 38.99 5.01
2996 6907 1.421268 AGATGACTTCAGGTTGCACCA 59.579 47.619 7.86 0.00 41.95 4.17
2998 6909 1.608055 TGACTTCAGGTTGCACCATG 58.392 50.000 7.86 0.00 41.95 3.66
2999 6910 1.133823 TGACTTCAGGTTGCACCATGT 60.134 47.619 0.00 0.00 41.95 3.21
3000 6911 2.105649 TGACTTCAGGTTGCACCATGTA 59.894 45.455 0.00 0.00 41.95 2.29
3010 7690 4.705023 GGTTGCACCATGTATTTAACCTCT 59.295 41.667 0.00 0.00 38.42 3.69
3050 7730 6.036517 AGCTACATCGATCTTTCATTCACAAC 59.963 38.462 0.00 0.00 0.00 3.32
3131 7812 5.138125 AGGAAATTGCACCAATACACAAG 57.862 39.130 0.00 0.00 32.43 3.16
3138 7819 5.058149 TGCACCAATACACAAGCTTTATG 57.942 39.130 0.00 0.32 0.00 1.90
3155 7836 5.220931 GCTTTATGGTTGAGGTAAGAGCATG 60.221 44.000 0.00 0.00 33.91 4.06
3170 7851 7.446625 GGTAAGAGCATGTCTAATCAATCCATT 59.553 37.037 0.00 0.00 32.65 3.16
3171 7852 9.494271 GTAAGAGCATGTCTAATCAATCCATTA 57.506 33.333 0.00 0.00 32.65 1.90
3172 7853 8.618702 AAGAGCATGTCTAATCAATCCATTAG 57.381 34.615 0.00 0.00 37.60 1.73
3173 7854 7.971201 AGAGCATGTCTAATCAATCCATTAGA 58.029 34.615 0.00 0.00 41.24 2.10
3174 7855 8.435187 AGAGCATGTCTAATCAATCCATTAGAA 58.565 33.333 4.80 0.00 43.76 2.10
3175 7856 8.388484 AGCATGTCTAATCAATCCATTAGAAC 57.612 34.615 4.80 2.00 43.76 3.01
3176 7857 7.446625 AGCATGTCTAATCAATCCATTAGAACC 59.553 37.037 4.80 0.00 43.76 3.62
3177 7858 7.446625 GCATGTCTAATCAATCCATTAGAACCT 59.553 37.037 4.80 0.00 43.76 3.50
3178 7859 8.997323 CATGTCTAATCAATCCATTAGAACCTC 58.003 37.037 4.80 0.00 43.76 3.85
3179 7860 8.089625 TGTCTAATCAATCCATTAGAACCTCA 57.910 34.615 4.80 0.00 43.76 3.86
3180 7861 8.717717 TGTCTAATCAATCCATTAGAACCTCAT 58.282 33.333 4.80 0.00 43.76 2.90
3185 7866 9.566432 AATCAATCCATTAGAACCTCATAACTC 57.434 33.333 0.00 0.00 0.00 3.01
3186 7867 7.509546 TCAATCCATTAGAACCTCATAACTCC 58.490 38.462 0.00 0.00 0.00 3.85
3187 7868 7.348274 TCAATCCATTAGAACCTCATAACTCCT 59.652 37.037 0.00 0.00 0.00 3.69
3188 7869 6.732896 TCCATTAGAACCTCATAACTCCTC 57.267 41.667 0.00 0.00 0.00 3.71
3189 7870 6.202331 TCCATTAGAACCTCATAACTCCTCA 58.798 40.000 0.00 0.00 0.00 3.86
3190 7871 6.846505 TCCATTAGAACCTCATAACTCCTCAT 59.153 38.462 0.00 0.00 0.00 2.90
3191 7872 7.348274 TCCATTAGAACCTCATAACTCCTCATT 59.652 37.037 0.00 0.00 0.00 2.57
3192 7873 8.651389 CCATTAGAACCTCATAACTCCTCATTA 58.349 37.037 0.00 0.00 0.00 1.90
3193 7874 9.482627 CATTAGAACCTCATAACTCCTCATTAC 57.517 37.037 0.00 0.00 0.00 1.89
3194 7875 8.840200 TTAGAACCTCATAACTCCTCATTACT 57.160 34.615 0.00 0.00 0.00 2.24
3195 7876 7.354751 AGAACCTCATAACTCCTCATTACTC 57.645 40.000 0.00 0.00 0.00 2.59
3196 7877 6.325286 AGAACCTCATAACTCCTCATTACTCC 59.675 42.308 0.00 0.00 0.00 3.85
3197 7878 5.782925 ACCTCATAACTCCTCATTACTCCT 58.217 41.667 0.00 0.00 0.00 3.69
3198 7879 6.923670 ACCTCATAACTCCTCATTACTCCTA 58.076 40.000 0.00 0.00 0.00 2.94
3199 7880 7.007723 ACCTCATAACTCCTCATTACTCCTAG 58.992 42.308 0.00 0.00 0.00 3.02
3200 7881 6.435904 CCTCATAACTCCTCATTACTCCTAGG 59.564 46.154 0.82 0.82 0.00 3.02
3201 7882 5.775701 TCATAACTCCTCATTACTCCTAGGC 59.224 44.000 2.96 0.00 0.00 3.93
3202 7883 2.965562 ACTCCTCATTACTCCTAGGCC 58.034 52.381 2.96 0.00 0.00 5.19
3203 7884 2.247635 ACTCCTCATTACTCCTAGGCCA 59.752 50.000 5.01 0.00 0.00 5.36
3204 7885 2.630580 CTCCTCATTACTCCTAGGCCAC 59.369 54.545 5.01 0.00 0.00 5.01
3205 7886 1.694696 CCTCATTACTCCTAGGCCACC 59.305 57.143 5.01 0.00 0.00 4.61
3206 7887 1.694696 CTCATTACTCCTAGGCCACCC 59.305 57.143 5.01 0.00 0.00 4.61
3207 7888 0.393077 CATTACTCCTAGGCCACCCG 59.607 60.000 5.01 0.00 35.76 5.28
3208 7889 0.263765 ATTACTCCTAGGCCACCCGA 59.736 55.000 5.01 0.00 35.76 5.14
3209 7890 0.685458 TTACTCCTAGGCCACCCGAC 60.685 60.000 5.01 0.00 35.76 4.79
3210 7891 2.578586 TACTCCTAGGCCACCCGACC 62.579 65.000 5.01 0.00 35.76 4.79
3211 7892 3.976490 CTCCTAGGCCACCCGACCA 62.976 68.421 5.01 0.00 35.76 4.02
3212 7893 3.782443 CCTAGGCCACCCGACCAC 61.782 72.222 5.01 0.00 35.76 4.16
3213 7894 3.782443 CTAGGCCACCCGACCACC 61.782 72.222 5.01 0.00 35.76 4.61
3214 7895 4.326227 TAGGCCACCCGACCACCT 62.326 66.667 5.01 0.00 35.76 4.00
3215 7896 2.866523 CTAGGCCACCCGACCACCTA 62.867 65.000 5.01 0.00 35.76 3.08
3216 7897 2.866523 TAGGCCACCCGACCACCTAG 62.867 65.000 5.01 0.00 35.76 3.02
3217 7898 3.001406 GCCACCCGACCACCTAGT 61.001 66.667 0.00 0.00 0.00 2.57
3218 7899 3.015312 GCCACCCGACCACCTAGTC 62.015 68.421 0.00 0.00 0.00 2.59
3225 7906 1.065928 GACCACCTAGTCGATGCCG 59.934 63.158 0.00 0.00 37.07 5.69
3226 7907 1.664321 GACCACCTAGTCGATGCCGT 61.664 60.000 0.00 0.00 37.05 5.68
3227 7908 1.065928 CCACCTAGTCGATGCCGTC 59.934 63.158 0.00 0.00 37.05 4.79
3228 7909 1.065928 CACCTAGTCGATGCCGTCC 59.934 63.158 0.00 0.00 37.05 4.79
3229 7910 1.076923 ACCTAGTCGATGCCGTCCT 60.077 57.895 0.00 0.00 37.05 3.85
3230 7911 1.102222 ACCTAGTCGATGCCGTCCTC 61.102 60.000 0.00 0.00 37.05 3.71
3231 7912 1.655329 CTAGTCGATGCCGTCCTCC 59.345 63.158 0.00 0.00 37.05 4.30
3232 7913 0.820074 CTAGTCGATGCCGTCCTCCT 60.820 60.000 0.00 0.00 37.05 3.69
3233 7914 0.818445 TAGTCGATGCCGTCCTCCTC 60.818 60.000 0.00 0.00 37.05 3.71
3234 7915 2.833582 TCGATGCCGTCCTCCTCC 60.834 66.667 0.00 0.00 37.05 4.30
3235 7916 4.271816 CGATGCCGTCCTCCTCCG 62.272 72.222 0.00 0.00 0.00 4.63
3236 7917 2.833582 GATGCCGTCCTCCTCCGA 60.834 66.667 0.00 0.00 0.00 4.55
3237 7918 2.835431 ATGCCGTCCTCCTCCGAG 60.835 66.667 0.00 0.00 35.72 4.63
3240 7921 2.192443 CCGTCCTCCTCCGAGCTA 59.808 66.667 0.00 0.00 34.49 3.32
3241 7922 1.894756 CCGTCCTCCTCCGAGCTAG 60.895 68.421 0.00 0.00 34.49 3.42
3242 7923 1.146485 CGTCCTCCTCCGAGCTAGA 59.854 63.158 0.00 0.00 34.49 2.43
3243 7924 0.250553 CGTCCTCCTCCGAGCTAGAT 60.251 60.000 0.00 0.00 34.49 1.98
3244 7925 1.816183 CGTCCTCCTCCGAGCTAGATT 60.816 57.143 0.00 0.00 34.49 2.40
3245 7926 1.883926 GTCCTCCTCCGAGCTAGATTC 59.116 57.143 0.00 0.00 34.49 2.52
3246 7927 1.495148 TCCTCCTCCGAGCTAGATTCA 59.505 52.381 0.00 0.00 34.49 2.57
3247 7928 2.091830 TCCTCCTCCGAGCTAGATTCAA 60.092 50.000 0.00 0.00 34.49 2.69
3248 7929 2.695666 CCTCCTCCGAGCTAGATTCAAA 59.304 50.000 0.00 0.00 34.49 2.69
3249 7930 3.323403 CCTCCTCCGAGCTAGATTCAAAT 59.677 47.826 0.00 0.00 34.49 2.32
3250 7931 4.555262 CTCCTCCGAGCTAGATTCAAATC 58.445 47.826 0.00 0.00 35.64 2.17
3251 7932 3.322254 TCCTCCGAGCTAGATTCAAATCC 59.678 47.826 0.00 0.00 36.04 3.01
3252 7933 3.312828 CTCCGAGCTAGATTCAAATCCG 58.687 50.000 0.00 0.00 36.04 4.18
3253 7934 2.956333 TCCGAGCTAGATTCAAATCCGA 59.044 45.455 0.00 0.00 36.04 4.55
3254 7935 3.383505 TCCGAGCTAGATTCAAATCCGAA 59.616 43.478 0.00 0.00 36.04 4.30
3255 7936 3.491267 CCGAGCTAGATTCAAATCCGAAC 59.509 47.826 0.00 0.00 36.04 3.95
3256 7937 3.180584 CGAGCTAGATTCAAATCCGAACG 59.819 47.826 0.00 0.00 36.04 3.95
3257 7938 4.113354 GAGCTAGATTCAAATCCGAACGT 58.887 43.478 0.00 0.00 36.04 3.99
3258 7939 3.865745 AGCTAGATTCAAATCCGAACGTG 59.134 43.478 0.00 0.00 36.04 4.49
3259 7940 3.001330 GCTAGATTCAAATCCGAACGTGG 59.999 47.826 0.00 0.00 36.04 4.94
3260 7941 1.737793 AGATTCAAATCCGAACGTGGC 59.262 47.619 0.00 0.00 36.04 5.01
3261 7942 1.466950 GATTCAAATCCGAACGTGGCA 59.533 47.619 0.00 0.00 0.00 4.92
3262 7943 0.871722 TTCAAATCCGAACGTGGCAG 59.128 50.000 0.00 0.00 0.00 4.85
3263 7944 0.250124 TCAAATCCGAACGTGGCAGT 60.250 50.000 0.00 0.00 0.00 4.40
3264 7945 0.110238 CAAATCCGAACGTGGCAGTG 60.110 55.000 0.00 0.00 0.00 3.66
3265 7946 1.852067 AAATCCGAACGTGGCAGTGC 61.852 55.000 6.55 6.55 0.00 4.40
3266 7947 3.529341 ATCCGAACGTGGCAGTGCA 62.529 57.895 18.61 0.00 0.00 4.57
3267 7948 3.716006 CCGAACGTGGCAGTGCAG 61.716 66.667 18.61 10.10 0.00 4.41
3268 7949 4.374702 CGAACGTGGCAGTGCAGC 62.375 66.667 18.61 7.77 0.00 5.25
3277 7958 3.114616 CAGTGCAGCCGACCGAAG 61.115 66.667 0.00 0.00 0.00 3.79
3290 7971 4.712425 CGAAGGGACGCGACGGTT 62.712 66.667 15.93 2.96 33.27 4.44
3291 7972 3.110178 GAAGGGACGCGACGGTTG 61.110 66.667 15.93 0.00 0.00 3.77
3292 7973 3.853597 GAAGGGACGCGACGGTTGT 62.854 63.158 15.93 0.00 0.00 3.32
3293 7974 4.657824 AGGGACGCGACGGTTGTG 62.658 66.667 15.93 7.38 0.00 3.33
3294 7975 4.651008 GGGACGCGACGGTTGTGA 62.651 66.667 15.93 0.00 0.00 3.58
3295 7976 2.659244 GGACGCGACGGTTGTGAA 60.659 61.111 15.93 0.00 0.00 3.18
3296 7977 2.654912 GGACGCGACGGTTGTGAAG 61.655 63.158 15.93 0.00 0.00 3.02
3297 7978 1.659335 GACGCGACGGTTGTGAAGA 60.659 57.895 15.93 0.00 0.00 2.87
3298 7979 1.606350 GACGCGACGGTTGTGAAGAG 61.606 60.000 15.93 0.00 0.00 2.85
3299 7980 2.372690 CGCGACGGTTGTGAAGAGG 61.373 63.158 0.00 0.00 0.00 3.69
3300 7981 1.006571 GCGACGGTTGTGAAGAGGA 60.007 57.895 0.00 0.00 0.00 3.71
3301 7982 0.389948 GCGACGGTTGTGAAGAGGAT 60.390 55.000 0.00 0.00 0.00 3.24
3302 7983 1.135199 GCGACGGTTGTGAAGAGGATA 60.135 52.381 0.00 0.00 0.00 2.59
3303 7984 2.798680 CGACGGTTGTGAAGAGGATAG 58.201 52.381 0.00 0.00 0.00 2.08
3304 7985 2.163815 CGACGGTTGTGAAGAGGATAGT 59.836 50.000 0.00 0.00 0.00 2.12
3305 7986 3.512680 GACGGTTGTGAAGAGGATAGTG 58.487 50.000 0.00 0.00 0.00 2.74
3306 7987 3.162666 ACGGTTGTGAAGAGGATAGTGA 58.837 45.455 0.00 0.00 0.00 3.41
3307 7988 3.769844 ACGGTTGTGAAGAGGATAGTGAT 59.230 43.478 0.00 0.00 0.00 3.06
3308 7989 4.954202 ACGGTTGTGAAGAGGATAGTGATA 59.046 41.667 0.00 0.00 0.00 2.15
3309 7990 5.067936 ACGGTTGTGAAGAGGATAGTGATAG 59.932 44.000 0.00 0.00 0.00 2.08
3310 7991 5.508153 CGGTTGTGAAGAGGATAGTGATAGG 60.508 48.000 0.00 0.00 0.00 2.57
3311 7992 5.598830 GGTTGTGAAGAGGATAGTGATAGGA 59.401 44.000 0.00 0.00 0.00 2.94
3312 7993 6.239176 GGTTGTGAAGAGGATAGTGATAGGAG 60.239 46.154 0.00 0.00 0.00 3.69
3313 7994 5.389520 TGTGAAGAGGATAGTGATAGGAGG 58.610 45.833 0.00 0.00 0.00 4.30
3314 7995 5.134509 TGTGAAGAGGATAGTGATAGGAGGA 59.865 44.000 0.00 0.00 0.00 3.71
3315 7996 5.710099 GTGAAGAGGATAGTGATAGGAGGAG 59.290 48.000 0.00 0.00 0.00 3.69
3316 7997 5.374154 TGAAGAGGATAGTGATAGGAGGAGT 59.626 44.000 0.00 0.00 0.00 3.85
3317 7998 5.255397 AGAGGATAGTGATAGGAGGAGTG 57.745 47.826 0.00 0.00 0.00 3.51
3318 7999 4.917040 AGAGGATAGTGATAGGAGGAGTGA 59.083 45.833 0.00 0.00 0.00 3.41
3319 8000 5.555542 AGAGGATAGTGATAGGAGGAGTGAT 59.444 44.000 0.00 0.00 0.00 3.06
3320 8001 6.738086 AGAGGATAGTGATAGGAGGAGTGATA 59.262 42.308 0.00 0.00 0.00 2.15
3321 8002 6.969043 AGGATAGTGATAGGAGGAGTGATAG 58.031 44.000 0.00 0.00 0.00 2.08
3322 8003 6.507485 AGGATAGTGATAGGAGGAGTGATAGT 59.493 42.308 0.00 0.00 0.00 2.12
3323 8004 6.601613 GGATAGTGATAGGAGGAGTGATAGTG 59.398 46.154 0.00 0.00 0.00 2.74
3324 8005 5.396057 AGTGATAGGAGGAGTGATAGTGT 57.604 43.478 0.00 0.00 0.00 3.55
3325 8006 5.136828 AGTGATAGGAGGAGTGATAGTGTG 58.863 45.833 0.00 0.00 0.00 3.82
3326 8007 5.103898 AGTGATAGGAGGAGTGATAGTGTGA 60.104 44.000 0.00 0.00 0.00 3.58
3327 8008 5.240623 GTGATAGGAGGAGTGATAGTGTGAG 59.759 48.000 0.00 0.00 0.00 3.51
3328 8009 3.748645 AGGAGGAGTGATAGTGTGAGT 57.251 47.619 0.00 0.00 0.00 3.41
3329 8010 3.360867 AGGAGGAGTGATAGTGTGAGTG 58.639 50.000 0.00 0.00 0.00 3.51
3330 8011 3.010696 AGGAGGAGTGATAGTGTGAGTGA 59.989 47.826 0.00 0.00 0.00 3.41
3331 8012 3.764434 GGAGGAGTGATAGTGTGAGTGAA 59.236 47.826 0.00 0.00 0.00 3.18
3332 8013 4.381079 GGAGGAGTGATAGTGTGAGTGAAC 60.381 50.000 0.00 0.00 0.00 3.18
3333 8014 4.411927 AGGAGTGATAGTGTGAGTGAACT 58.588 43.478 0.00 0.00 0.00 3.01
3334 8015 4.219507 AGGAGTGATAGTGTGAGTGAACTG 59.780 45.833 0.00 0.00 0.00 3.16
3335 8016 4.489810 GAGTGATAGTGTGAGTGAACTGG 58.510 47.826 0.00 0.00 0.00 4.00
3336 8017 4.152647 AGTGATAGTGTGAGTGAACTGGA 58.847 43.478 0.00 0.00 0.00 3.86
3337 8018 4.219507 AGTGATAGTGTGAGTGAACTGGAG 59.780 45.833 0.00 0.00 0.00 3.86
3338 8019 4.021894 GTGATAGTGTGAGTGAACTGGAGT 60.022 45.833 0.00 0.00 0.00 3.85
3339 8020 2.898729 AGTGTGAGTGAACTGGAGTG 57.101 50.000 0.00 0.00 0.00 3.51
3340 8021 1.414181 AGTGTGAGTGAACTGGAGTGG 59.586 52.381 0.00 0.00 0.00 4.00
3341 8022 0.106708 TGTGAGTGAACTGGAGTGGC 59.893 55.000 0.00 0.00 0.00 5.01
3342 8023 0.394565 GTGAGTGAACTGGAGTGGCT 59.605 55.000 0.00 0.00 0.00 4.75
3343 8024 1.618837 GTGAGTGAACTGGAGTGGCTA 59.381 52.381 0.00 0.00 0.00 3.93
3344 8025 1.895798 TGAGTGAACTGGAGTGGCTAG 59.104 52.381 0.00 0.00 0.00 3.42
3345 8026 1.205893 GAGTGAACTGGAGTGGCTAGG 59.794 57.143 0.00 0.00 0.00 3.02
3346 8027 0.250513 GTGAACTGGAGTGGCTAGGG 59.749 60.000 0.00 0.00 0.00 3.53
3347 8028 0.178903 TGAACTGGAGTGGCTAGGGT 60.179 55.000 0.00 0.00 0.00 4.34
3348 8029 0.984995 GAACTGGAGTGGCTAGGGTT 59.015 55.000 0.00 0.00 0.00 4.11
3349 8030 2.185387 GAACTGGAGTGGCTAGGGTTA 58.815 52.381 0.00 0.00 0.00 2.85
3350 8031 1.867363 ACTGGAGTGGCTAGGGTTAG 58.133 55.000 0.00 0.00 0.00 2.34
3351 8032 1.123928 CTGGAGTGGCTAGGGTTAGG 58.876 60.000 0.00 0.00 0.00 2.69
3352 8033 0.326238 TGGAGTGGCTAGGGTTAGGG 60.326 60.000 0.00 0.00 0.00 3.53
3353 8034 0.326332 GGAGTGGCTAGGGTTAGGGT 60.326 60.000 0.00 0.00 0.00 4.34
3354 8035 1.581223 GAGTGGCTAGGGTTAGGGTT 58.419 55.000 0.00 0.00 0.00 4.11
3355 8036 1.914108 GAGTGGCTAGGGTTAGGGTTT 59.086 52.381 0.00 0.00 0.00 3.27
3356 8037 1.633945 AGTGGCTAGGGTTAGGGTTTG 59.366 52.381 0.00 0.00 0.00 2.93
3357 8038 1.631898 GTGGCTAGGGTTAGGGTTTGA 59.368 52.381 0.00 0.00 0.00 2.69
3358 8039 2.241430 GTGGCTAGGGTTAGGGTTTGAT 59.759 50.000 0.00 0.00 0.00 2.57
3359 8040 2.508300 TGGCTAGGGTTAGGGTTTGATC 59.492 50.000 0.00 0.00 0.00 2.92
3360 8041 2.158652 GGCTAGGGTTAGGGTTTGATCC 60.159 54.545 0.00 0.00 0.00 3.36
3361 8042 2.508300 GCTAGGGTTAGGGTTTGATCCA 59.492 50.000 0.00 0.00 0.00 3.41
3362 8043 3.684697 GCTAGGGTTAGGGTTTGATCCAC 60.685 52.174 0.00 0.00 0.00 4.02
3363 8044 2.644151 AGGGTTAGGGTTTGATCCACT 58.356 47.619 0.00 0.00 0.00 4.00
3364 8045 2.576648 AGGGTTAGGGTTTGATCCACTC 59.423 50.000 0.00 0.00 0.00 3.51
3365 8046 2.576648 GGGTTAGGGTTTGATCCACTCT 59.423 50.000 0.47 0.47 0.00 3.24
3366 8047 3.610911 GGTTAGGGTTTGATCCACTCTG 58.389 50.000 5.02 0.00 0.00 3.35
3367 8048 3.610911 GTTAGGGTTTGATCCACTCTGG 58.389 50.000 5.02 0.00 39.43 3.86
3380 8061 4.655963 TCCACTCTGGAGAGGAAATTTTG 58.344 43.478 12.98 0.00 42.67 2.44
3381 8062 4.104738 TCCACTCTGGAGAGGAAATTTTGT 59.895 41.667 12.98 0.00 42.67 2.83
3382 8063 4.217118 CCACTCTGGAGAGGAAATTTTGTG 59.783 45.833 8.09 0.00 46.13 3.33
3383 8064 4.217118 CACTCTGGAGAGGAAATTTTGTGG 59.783 45.833 8.52 0.00 46.13 4.17
3384 8065 3.760684 CTCTGGAGAGGAAATTTTGTGGG 59.239 47.826 0.00 0.00 38.48 4.61
3385 8066 3.140144 TCTGGAGAGGAAATTTTGTGGGT 59.860 43.478 0.00 0.00 0.00 4.51
3386 8067 3.496331 TGGAGAGGAAATTTTGTGGGTC 58.504 45.455 0.00 0.00 0.00 4.46
3387 8068 2.488153 GGAGAGGAAATTTTGTGGGTCG 59.512 50.000 0.00 0.00 0.00 4.79
3388 8069 2.488153 GAGAGGAAATTTTGTGGGTCGG 59.512 50.000 0.00 0.00 0.00 4.79
3389 8070 2.158519 AGAGGAAATTTTGTGGGTCGGT 60.159 45.455 0.00 0.00 0.00 4.69
3390 8071 1.960689 AGGAAATTTTGTGGGTCGGTG 59.039 47.619 0.00 0.00 0.00 4.94
3391 8072 1.000394 GGAAATTTTGTGGGTCGGTGG 60.000 52.381 0.00 0.00 0.00 4.61
3392 8073 1.684450 GAAATTTTGTGGGTCGGTGGT 59.316 47.619 0.00 0.00 0.00 4.16
3393 8074 1.036707 AATTTTGTGGGTCGGTGGTG 58.963 50.000 0.00 0.00 0.00 4.17
3394 8075 0.825840 ATTTTGTGGGTCGGTGGTGG 60.826 55.000 0.00 0.00 0.00 4.61
3395 8076 2.912987 TTTTGTGGGTCGGTGGTGGG 62.913 60.000 0.00 0.00 0.00 4.61
3406 8087 3.341270 TGGTGGGCCAGAACAGTT 58.659 55.556 6.40 0.00 40.46 3.16
3407 8088 1.150536 TGGTGGGCCAGAACAGTTC 59.849 57.895 6.40 5.00 40.46 3.01
3408 8089 1.966451 GGTGGGCCAGAACAGTTCG 60.966 63.158 6.40 3.27 34.02 3.95
3409 8090 1.070786 GTGGGCCAGAACAGTTCGA 59.929 57.895 6.40 0.00 34.02 3.71
3410 8091 0.534203 GTGGGCCAGAACAGTTCGAA 60.534 55.000 6.40 0.00 34.02 3.71
3411 8092 0.400213 TGGGCCAGAACAGTTCGAAT 59.600 50.000 0.00 0.00 34.02 3.34
3412 8093 0.804989 GGGCCAGAACAGTTCGAATG 59.195 55.000 4.39 3.61 34.02 2.67
3413 8094 1.523758 GGCCAGAACAGTTCGAATGT 58.476 50.000 7.68 4.28 34.02 2.71
3414 8095 1.197721 GGCCAGAACAGTTCGAATGTG 59.802 52.381 7.68 4.97 34.02 3.21
3415 8096 1.400242 GCCAGAACAGTTCGAATGTGC 60.400 52.381 7.68 5.90 34.02 4.57
3416 8097 2.146342 CCAGAACAGTTCGAATGTGCT 58.854 47.619 12.71 12.71 36.98 4.40
3417 8098 3.325870 CCAGAACAGTTCGAATGTGCTA 58.674 45.455 16.20 0.00 34.10 3.49
3418 8099 3.935203 CCAGAACAGTTCGAATGTGCTAT 59.065 43.478 16.20 0.00 34.10 2.97
3419 8100 4.033358 CCAGAACAGTTCGAATGTGCTATC 59.967 45.833 16.20 10.19 34.10 2.08
3420 8101 4.033358 CAGAACAGTTCGAATGTGCTATCC 59.967 45.833 16.20 0.00 34.10 2.59
3421 8102 2.540515 ACAGTTCGAATGTGCTATCCG 58.459 47.619 0.00 0.00 0.00 4.18
3422 8103 1.860950 CAGTTCGAATGTGCTATCCGG 59.139 52.381 0.00 0.00 0.00 5.14
3423 8104 1.754803 AGTTCGAATGTGCTATCCGGA 59.245 47.619 6.61 6.61 0.00 5.14
3424 8105 1.859080 GTTCGAATGTGCTATCCGGAC 59.141 52.381 6.12 0.00 34.08 4.79
3425 8106 0.030235 TCGAATGTGCTATCCGGACG 59.970 55.000 6.12 1.91 36.65 4.79
3426 8107 0.248907 CGAATGTGCTATCCGGACGT 60.249 55.000 6.12 0.00 36.65 4.34
3427 8108 1.209128 GAATGTGCTATCCGGACGTG 58.791 55.000 6.12 0.14 36.65 4.49
3428 8109 0.535335 AATGTGCTATCCGGACGTGT 59.465 50.000 6.12 0.00 36.65 4.49
3429 8110 0.179111 ATGTGCTATCCGGACGTGTG 60.179 55.000 6.12 0.00 36.65 3.82
3430 8111 2.165301 GTGCTATCCGGACGTGTGC 61.165 63.158 6.12 7.68 0.00 4.57
3431 8112 2.348104 TGCTATCCGGACGTGTGCT 61.348 57.895 6.12 0.00 0.00 4.40
3432 8113 1.878522 GCTATCCGGACGTGTGCTG 60.879 63.158 6.12 0.00 0.00 4.41
3433 8114 1.878522 CTATCCGGACGTGTGCTGC 60.879 63.158 6.12 0.00 0.00 5.25
3434 8115 3.365291 TATCCGGACGTGTGCTGCC 62.365 63.158 6.12 0.00 0.00 4.85
3439 8120 4.760047 GACGTGTGCTGCCCCGAT 62.760 66.667 0.00 0.00 0.00 4.18
3440 8121 3.365291 GACGTGTGCTGCCCCGATA 62.365 63.158 0.00 0.00 0.00 2.92
3441 8122 2.586079 CGTGTGCTGCCCCGATAG 60.586 66.667 0.00 0.00 0.00 2.08
3442 8123 2.584608 GTGTGCTGCCCCGATAGT 59.415 61.111 0.00 0.00 0.00 2.12
3443 8124 1.521681 GTGTGCTGCCCCGATAGTC 60.522 63.158 0.00 0.00 0.00 2.59
3444 8125 1.685765 TGTGCTGCCCCGATAGTCT 60.686 57.895 0.00 0.00 0.00 3.24
3445 8126 0.396556 TGTGCTGCCCCGATAGTCTA 60.397 55.000 0.00 0.00 0.00 2.59
3446 8127 0.315568 GTGCTGCCCCGATAGTCTAG 59.684 60.000 0.00 0.00 0.00 2.43
3447 8128 0.827925 TGCTGCCCCGATAGTCTAGG 60.828 60.000 0.00 0.00 0.00 3.02
3448 8129 1.536943 GCTGCCCCGATAGTCTAGGG 61.537 65.000 0.00 0.00 44.67 3.53
3457 8138 5.599999 CCGATAGTCTAGGGAAATATGGG 57.400 47.826 0.00 0.00 0.00 4.00
3458 8139 5.024118 CCGATAGTCTAGGGAAATATGGGT 58.976 45.833 0.00 0.00 0.00 4.51
3459 8140 5.484290 CCGATAGTCTAGGGAAATATGGGTT 59.516 44.000 0.00 0.00 0.00 4.11
3460 8141 6.013639 CCGATAGTCTAGGGAAATATGGGTTT 60.014 42.308 0.00 0.00 0.00 3.27
3461 8142 7.450903 CGATAGTCTAGGGAAATATGGGTTTT 58.549 38.462 0.00 0.00 0.00 2.43
3462 8143 8.591072 CGATAGTCTAGGGAAATATGGGTTTTA 58.409 37.037 0.00 0.00 0.00 1.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 6.477053 TTGACCAGATTTGACCAAAATTCA 57.523 33.333 0.00 0.00 38.64 2.57
45 46 7.447374 TTGACCATAGTTTGACCATAGTTTG 57.553 36.000 0.00 0.00 0.00 2.93
49 50 8.041323 AGTAGTTTGACCATAGTTTGACCATAG 58.959 37.037 0.00 0.00 0.00 2.23
51 52 6.779860 AGTAGTTTGACCATAGTTTGACCAT 58.220 36.000 0.00 0.00 0.00 3.55
127 3768 7.116233 ACACATTTCACTGTTTGAGTTTGAAAC 59.884 33.333 0.00 0.00 32.33 2.78
156 3797 5.711506 TCAGGAATTTAGCTTGAGCATGAAA 59.288 36.000 5.70 3.43 45.16 2.69
180 3821 8.568617 AGTAAGATGTCAATCCTATTAACCCT 57.431 34.615 0.00 0.00 32.77 4.34
221 3862 3.947626 TCGTTTTTAAGTCTGCACTTGC 58.052 40.909 0.01 0.00 43.17 4.01
231 3872 6.877855 GGTTCTATTCTCCCTCGTTTTTAAGT 59.122 38.462 0.00 0.00 0.00 2.24
235 3876 4.586884 GGGTTCTATTCTCCCTCGTTTTT 58.413 43.478 0.00 0.00 38.29 1.94
236 3877 3.369157 CGGGTTCTATTCTCCCTCGTTTT 60.369 47.826 0.00 0.00 39.10 2.43
241 3882 3.451540 ACTTTCGGGTTCTATTCTCCCTC 59.548 47.826 0.00 0.00 39.10 4.30
256 3897 1.126846 CTGAGCACGCTTAACTTTCGG 59.873 52.381 0.00 0.00 0.00 4.30
278 3919 4.229812 TCACCTATCCTCTCACTACTCCAA 59.770 45.833 0.00 0.00 0.00 3.53
296 3937 2.995574 CTTCCCGGACGGTCACCT 60.996 66.667 0.73 0.00 0.00 4.00
325 3966 4.982241 TCTAATCACCCCTCATCATTCC 57.018 45.455 0.00 0.00 0.00 3.01
459 4101 2.485124 GCGAGGAGAGCTACCACTAGTA 60.485 54.545 11.27 0.00 0.00 1.82
460 4102 1.747898 GCGAGGAGAGCTACCACTAGT 60.748 57.143 11.27 0.00 0.00 2.57
461 4103 0.948678 GCGAGGAGAGCTACCACTAG 59.051 60.000 11.27 0.00 0.00 2.57
462 4104 0.814410 CGCGAGGAGAGCTACCACTA 60.814 60.000 0.00 0.00 0.00 2.74
463 4105 2.115911 CGCGAGGAGAGCTACCACT 61.116 63.158 0.00 0.00 0.00 4.00
464 4106 2.113433 TCGCGAGGAGAGCTACCAC 61.113 63.158 3.71 4.84 0.00 4.16
465 4107 2.113433 GTCGCGAGGAGAGCTACCA 61.113 63.158 10.24 0.00 0.00 3.25
466 4108 2.716864 GTCGCGAGGAGAGCTACC 59.283 66.667 10.24 1.61 0.00 3.18
467 4109 1.703438 TTCGTCGCGAGGAGAGCTAC 61.703 60.000 27.80 5.20 37.14 3.58
468 4110 1.429927 CTTCGTCGCGAGGAGAGCTA 61.430 60.000 27.80 14.47 37.14 3.32
469 4111 2.746671 TTCGTCGCGAGGAGAGCT 60.747 61.111 27.80 0.00 37.14 4.09
470 4112 2.054140 ATCTTCGTCGCGAGGAGAGC 62.054 60.000 27.80 6.84 44.39 4.09
471 4113 0.041663 GATCTTCGTCGCGAGGAGAG 60.042 60.000 27.80 25.02 44.39 3.20
472 4114 0.743345 TGATCTTCGTCGCGAGGAGA 60.743 55.000 27.80 25.15 44.39 3.71
473 4115 0.098905 TTGATCTTCGTCGCGAGGAG 59.901 55.000 27.80 21.61 44.39 3.69
474 4116 0.738975 ATTGATCTTCGTCGCGAGGA 59.261 50.000 26.15 26.15 45.16 3.71
475 4117 0.848942 CATTGATCTTCGTCGCGAGG 59.151 55.000 22.14 22.14 37.14 4.63
476 4118 0.228238 GCATTGATCTTCGTCGCGAG 59.772 55.000 10.24 3.82 37.14 5.03
477 4119 0.179137 AGCATTGATCTTCGTCGCGA 60.179 50.000 3.71 3.71 0.00 5.87
478 4120 0.228238 GAGCATTGATCTTCGTCGCG 59.772 55.000 0.00 0.00 0.00 5.87
479 4121 0.228238 CGAGCATTGATCTTCGTCGC 59.772 55.000 0.00 0.00 0.00 5.19
480 4122 0.228238 GCGAGCATTGATCTTCGTCG 59.772 55.000 0.00 0.00 0.00 5.12
481 4123 1.565305 AGCGAGCATTGATCTTCGTC 58.435 50.000 0.00 0.00 0.00 4.20
482 4124 1.929836 GAAGCGAGCATTGATCTTCGT 59.070 47.619 0.00 0.00 0.00 3.85
483 4125 1.260033 GGAAGCGAGCATTGATCTTCG 59.740 52.381 0.00 0.00 35.31 3.79
484 4126 2.559440 AGGAAGCGAGCATTGATCTTC 58.441 47.619 0.00 0.00 34.12 2.87
485 4127 2.706339 AGGAAGCGAGCATTGATCTT 57.294 45.000 0.00 0.00 0.00 2.40
486 4128 2.706339 AAGGAAGCGAGCATTGATCT 57.294 45.000 0.00 0.00 0.00 2.75
487 4129 4.060900 TCATAAGGAAGCGAGCATTGATC 58.939 43.478 0.00 0.00 0.00 2.92
488 4130 4.077300 TCATAAGGAAGCGAGCATTGAT 57.923 40.909 0.00 0.00 0.00 2.57
489 4131 3.541996 TCATAAGGAAGCGAGCATTGA 57.458 42.857 0.00 0.00 0.00 2.57
490 4132 4.621068 TTTCATAAGGAAGCGAGCATTG 57.379 40.909 0.00 0.00 36.72 2.82
491 4133 6.712095 TCATATTTCATAAGGAAGCGAGCATT 59.288 34.615 0.00 0.00 36.72 3.56
492 4134 6.148480 GTCATATTTCATAAGGAAGCGAGCAT 59.852 38.462 0.00 0.00 36.72 3.79
493 4135 5.466728 GTCATATTTCATAAGGAAGCGAGCA 59.533 40.000 0.00 0.00 36.72 4.26
494 4136 5.698545 AGTCATATTTCATAAGGAAGCGAGC 59.301 40.000 0.00 0.00 36.72 5.03
495 4137 7.116090 CAGAGTCATATTTCATAAGGAAGCGAG 59.884 40.741 0.00 0.00 36.72 5.03
496 4138 6.925718 CAGAGTCATATTTCATAAGGAAGCGA 59.074 38.462 0.00 0.00 36.72 4.93
497 4139 6.146837 CCAGAGTCATATTTCATAAGGAAGCG 59.853 42.308 0.00 0.00 36.72 4.68
498 4140 7.220030 TCCAGAGTCATATTTCATAAGGAAGC 58.780 38.462 0.00 0.00 36.72 3.86
499 4141 7.877097 CCTCCAGAGTCATATTTCATAAGGAAG 59.123 40.741 0.00 0.00 36.72 3.46
500 4142 7.690301 GCCTCCAGAGTCATATTTCATAAGGAA 60.690 40.741 0.00 0.00 0.00 3.36
501 4143 6.239714 GCCTCCAGAGTCATATTTCATAAGGA 60.240 42.308 0.00 0.00 0.00 3.36
502 4144 5.936956 GCCTCCAGAGTCATATTTCATAAGG 59.063 44.000 0.00 0.00 0.00 2.69
503 4145 6.528321 TGCCTCCAGAGTCATATTTCATAAG 58.472 40.000 0.00 0.00 0.00 1.73
504 4146 6.499106 TGCCTCCAGAGTCATATTTCATAA 57.501 37.500 0.00 0.00 0.00 1.90
505 4147 6.499699 AGATGCCTCCAGAGTCATATTTCATA 59.500 38.462 0.00 0.00 0.00 2.15
506 4148 5.310068 AGATGCCTCCAGAGTCATATTTCAT 59.690 40.000 0.00 0.00 0.00 2.57
507 4149 4.657504 AGATGCCTCCAGAGTCATATTTCA 59.342 41.667 0.00 0.00 0.00 2.69
508 4150 5.226194 AGATGCCTCCAGAGTCATATTTC 57.774 43.478 0.00 0.00 0.00 2.17
509 4151 6.949117 ATAGATGCCTCCAGAGTCATATTT 57.051 37.500 0.00 0.00 0.00 1.40
510 4152 6.350864 CGAATAGATGCCTCCAGAGTCATATT 60.351 42.308 0.00 0.00 0.00 1.28
511 4153 5.126869 CGAATAGATGCCTCCAGAGTCATAT 59.873 44.000 0.00 0.00 0.00 1.78
512 4154 4.460731 CGAATAGATGCCTCCAGAGTCATA 59.539 45.833 0.00 0.00 0.00 2.15
513 4155 3.257873 CGAATAGATGCCTCCAGAGTCAT 59.742 47.826 0.00 0.00 0.00 3.06
514 4156 2.625314 CGAATAGATGCCTCCAGAGTCA 59.375 50.000 0.00 0.00 0.00 3.41
515 4157 2.887783 TCGAATAGATGCCTCCAGAGTC 59.112 50.000 0.00 0.00 0.00 3.36
516 4158 2.890311 CTCGAATAGATGCCTCCAGAGT 59.110 50.000 0.00 0.00 0.00 3.24
517 4159 3.153130 TCTCGAATAGATGCCTCCAGAG 58.847 50.000 0.00 0.00 0.00 3.35
518 4160 3.229697 TCTCGAATAGATGCCTCCAGA 57.770 47.619 0.00 0.00 0.00 3.86
537 4179 3.068873 AGAACGATCCACCTTAGAGCATC 59.931 47.826 0.00 0.00 0.00 3.91
538 4180 3.034635 AGAACGATCCACCTTAGAGCAT 58.965 45.455 0.00 0.00 0.00 3.79
539 4181 2.457598 AGAACGATCCACCTTAGAGCA 58.542 47.619 0.00 0.00 0.00 4.26
540 4182 3.528597 AAGAACGATCCACCTTAGAGC 57.471 47.619 0.00 0.00 0.00 4.09
541 4183 5.073311 TGAAAGAACGATCCACCTTAGAG 57.927 43.478 0.00 0.00 0.00 2.43
542 4184 5.221561 TGTTGAAAGAACGATCCACCTTAGA 60.222 40.000 0.00 0.00 0.00 2.10
543 4185 4.994852 TGTTGAAAGAACGATCCACCTTAG 59.005 41.667 0.00 0.00 0.00 2.18
555 4197 3.300009 CACCGCATCTTGTTGAAAGAAC 58.700 45.455 0.00 0.00 0.00 3.01
586 4228 2.329267 TGAGGGCCACGATATGAAGAT 58.671 47.619 6.18 0.00 0.00 2.40
596 4239 1.942657 CAACATCTATTGAGGGCCACG 59.057 52.381 6.18 0.00 0.00 4.94
614 4257 0.749818 ACCAACGCACACCATCACAA 60.750 50.000 0.00 0.00 0.00 3.33
615 4258 1.153066 ACCAACGCACACCATCACA 60.153 52.632 0.00 0.00 0.00 3.58
617 4260 2.551006 GCACCAACGCACACCATCA 61.551 57.895 0.00 0.00 0.00 3.07
646 4290 3.865745 GTCAGCATATACAGTCACACCAC 59.134 47.826 0.00 0.00 0.00 4.16
660 4304 0.973632 AGAACACCCACGTCAGCATA 59.026 50.000 0.00 0.00 0.00 3.14
661 4305 0.603707 CAGAACACCCACGTCAGCAT 60.604 55.000 0.00 0.00 0.00 3.79
662 4306 1.227527 CAGAACACCCACGTCAGCA 60.228 57.895 0.00 0.00 0.00 4.41
663 4307 0.946221 CTCAGAACACCCACGTCAGC 60.946 60.000 0.00 0.00 0.00 4.26
664 4308 0.673985 TCTCAGAACACCCACGTCAG 59.326 55.000 0.00 0.00 0.00 3.51
665 4309 1.116308 TTCTCAGAACACCCACGTCA 58.884 50.000 0.00 0.00 0.00 4.35
666 4310 2.234300 TTTCTCAGAACACCCACGTC 57.766 50.000 0.00 0.00 0.00 4.34
667 4311 2.702592 TTTTCTCAGAACACCCACGT 57.297 45.000 0.00 0.00 0.00 4.49
668 4312 3.058224 GGATTTTTCTCAGAACACCCACG 60.058 47.826 0.00 0.00 0.00 4.94
669 4313 4.022849 CAGGATTTTTCTCAGAACACCCAC 60.023 45.833 0.00 0.00 0.00 4.61
670 4314 4.141274 TCAGGATTTTTCTCAGAACACCCA 60.141 41.667 0.00 0.00 0.00 4.51
671 4315 4.398319 TCAGGATTTTTCTCAGAACACCC 58.602 43.478 0.00 0.00 0.00 4.61
672 4316 5.105997 CCATCAGGATTTTTCTCAGAACACC 60.106 44.000 0.00 0.00 36.89 4.16
673 4317 5.707298 TCCATCAGGATTTTTCTCAGAACAC 59.293 40.000 0.00 0.00 39.61 3.32
730 4374 6.851330 GCACGTACTGAAAATTATTCATAGGC 59.149 38.462 0.00 0.00 0.00 3.93
750 4394 1.033574 GAGCCTAGATAGGTGCACGT 58.966 55.000 17.24 17.24 45.42 4.49
756 4400 4.715792 CCATGATGATGAGCCTAGATAGGT 59.284 45.833 7.71 0.00 45.42 3.08
811 4455 0.806492 GAGGAAATGTCGCCGGAGTC 60.806 60.000 5.05 0.00 0.00 3.36
815 4459 0.378257 CAATGAGGAAATGTCGCCGG 59.622 55.000 0.00 0.00 0.00 6.13
825 4469 1.204786 TCCGGGGAAGCAATGAGGAA 61.205 55.000 0.00 0.00 0.00 3.36
860 4504 2.483876 ACACATGCATATACGGCTGAC 58.516 47.619 0.00 0.00 0.00 3.51
875 4545 2.647529 TGATCGCGTCAGTAACACAT 57.352 45.000 5.77 0.00 31.80 3.21
878 4548 3.743911 ACAAAATGATCGCGTCAGTAACA 59.256 39.130 5.77 0.00 40.92 2.41
892 4562 3.932710 GCAGAGTGGACGATACAAAATGA 59.067 43.478 0.00 0.00 0.00 2.57
932 4602 1.810030 GAATGGCCTCGGTCACGAC 60.810 63.158 3.32 0.00 45.59 4.34
936 4606 2.268920 GCTGAATGGCCTCGGTCA 59.731 61.111 3.32 0.97 0.00 4.02
944 4614 0.885196 TAAACCGTTGGCTGAATGGC 59.115 50.000 7.06 0.00 43.87 4.40
945 4615 3.866883 ATTAAACCGTTGGCTGAATGG 57.133 42.857 5.90 5.90 45.37 3.16
948 4618 3.305064 GCTCAATTAAACCGTTGGCTGAA 60.305 43.478 0.00 0.00 0.00 3.02
950 4620 2.228822 AGCTCAATTAAACCGTTGGCTG 59.771 45.455 0.00 0.00 33.59 4.85
991 4672 1.502231 GGAGCTGCCATGTATGTACG 58.498 55.000 0.00 0.00 36.34 3.67
1185 4871 2.430921 CGGAACTGCTCGTCGCTT 60.431 61.111 0.00 0.00 40.11 4.68
1528 5214 1.524621 CCATGGTGGCGATGAGACC 60.525 63.158 2.57 0.00 0.00 3.85
1529 5215 4.131376 CCATGGTGGCGATGAGAC 57.869 61.111 2.57 0.00 0.00 3.36
1653 5339 3.384789 CGGTGATCTCCTTCTTATGGTCA 59.615 47.826 11.86 0.00 0.00 4.02
1659 5345 2.995283 TCGTCGGTGATCTCCTTCTTA 58.005 47.619 11.86 0.00 0.00 2.10
1673 5359 2.938539 GAACGCCTCCAGATCGTCGG 62.939 65.000 0.00 0.00 35.18 4.79
1698 5384 2.231478 GTCTGAGTAGTACTGCTTGCCA 59.769 50.000 15.09 7.69 0.00 4.92
2115 5822 2.265739 GCTGGGTCGAGCATGTCA 59.734 61.111 17.59 4.02 38.95 3.58
2255 5962 4.724602 TGTCGTCGAGCAGCTGCC 62.725 66.667 34.39 23.65 43.38 4.85
2467 6174 3.454812 AGAAATAGGCCGGTATGACAGTT 59.545 43.478 1.90 0.00 0.00 3.16
2507 6214 7.410174 TGATACCAAGGAGGAAAATGTTACAT 58.590 34.615 0.00 0.00 41.22 2.29
2555 6262 0.968405 AGTGGCCTTTTACGACGGTA 59.032 50.000 3.32 0.00 0.00 4.02
2559 6266 1.873863 GCCAGTGGCCTTTTACGAC 59.126 57.895 24.53 0.00 44.06 4.34
2571 6278 1.669115 CACTCCGAACCAGCCAGTG 60.669 63.158 0.00 0.00 0.00 3.66
2572 6279 2.743718 CACTCCGAACCAGCCAGT 59.256 61.111 0.00 0.00 0.00 4.00
2574 6281 4.329545 GCCACTCCGAACCAGCCA 62.330 66.667 0.00 0.00 0.00 4.75
2596 6303 0.379669 GCATTGATTCTCACCGGCAG 59.620 55.000 0.00 0.00 0.00 4.85
2606 6313 5.916883 CCATGACTAAAATCGGCATTGATTC 59.083 40.000 0.00 0.00 37.59 2.52
2611 6318 2.033299 CGCCATGACTAAAATCGGCATT 59.967 45.455 0.00 0.00 39.56 3.56
2612 6319 1.603802 CGCCATGACTAAAATCGGCAT 59.396 47.619 0.00 0.00 39.56 4.40
2622 6329 0.384309 GTCATCGTCCGCCATGACTA 59.616 55.000 11.88 0.00 43.80 2.59
2623 6330 1.141881 GTCATCGTCCGCCATGACT 59.858 57.895 11.88 0.00 43.80 3.41
2630 6337 1.562575 AAAACACCGTCATCGTCCGC 61.563 55.000 0.00 0.00 35.01 5.54
2632 6339 2.665052 GTCTAAAACACCGTCATCGTCC 59.335 50.000 0.00 0.00 35.01 4.79
2639 6346 5.406477 AGGAAATAACGTCTAAAACACCGTC 59.594 40.000 0.00 0.00 32.30 4.79
2640 6347 5.299949 AGGAAATAACGTCTAAAACACCGT 58.700 37.500 0.00 0.00 34.56 4.83
2677 6384 2.738314 AGGTAACGACAATTGTAACGGC 59.262 45.455 19.90 11.42 46.39 5.68
2678 6385 3.059834 CGAGGTAACGACAATTGTAACGG 59.940 47.826 19.90 9.78 46.39 4.44
2679 6386 3.480825 GCGAGGTAACGACAATTGTAACG 60.481 47.826 11.95 14.24 46.39 3.18
2680 6387 3.676646 AGCGAGGTAACGACAATTGTAAC 59.323 43.478 11.95 7.58 46.39 2.50
2681 6388 3.916761 AGCGAGGTAACGACAATTGTAA 58.083 40.909 11.95 0.00 46.39 2.41
2682 6389 3.504863 GAGCGAGGTAACGACAATTGTA 58.495 45.455 11.95 0.00 46.39 2.41
2683 6390 2.334838 GAGCGAGGTAACGACAATTGT 58.665 47.619 11.78 11.78 46.39 2.71
2684 6391 1.659098 GGAGCGAGGTAACGACAATTG 59.341 52.381 3.24 3.24 46.39 2.32
2685 6392 1.274167 TGGAGCGAGGTAACGACAATT 59.726 47.619 0.00 0.00 46.39 2.32
2686 6393 0.892755 TGGAGCGAGGTAACGACAAT 59.107 50.000 0.00 0.00 46.39 2.71
2687 6394 0.892755 ATGGAGCGAGGTAACGACAA 59.107 50.000 0.00 0.00 46.39 3.18
2688 6395 0.454600 GATGGAGCGAGGTAACGACA 59.545 55.000 0.00 0.00 46.39 4.35
2718 6425 4.409718 GGAGACCAAGATCTAGGGTTTC 57.590 50.000 20.46 20.46 35.64 2.78
2732 6439 2.110011 TATCATCTGATCGGGGAGACCA 59.890 50.000 0.62 0.00 43.69 4.02
2740 6447 2.061773 GCACCGTTATCATCTGATCGG 58.938 52.381 15.08 15.08 43.45 4.18
2741 6448 2.061773 GGCACCGTTATCATCTGATCG 58.938 52.381 0.00 0.00 36.05 3.69
2746 6453 2.501723 ACAGAAGGCACCGTTATCATCT 59.498 45.455 0.00 0.00 0.00 2.90
2765 6472 1.563879 CCCCATGGGTAGAATGACACA 59.436 52.381 29.33 0.00 38.25 3.72
2780 6487 0.618393 CTCCAAAACCATGCCCCCAT 60.618 55.000 0.00 0.00 0.00 4.00
2801 6508 2.924105 GCACCTTCAAGCAGCACCC 61.924 63.158 0.00 0.00 0.00 4.61
2809 6516 1.610522 CCACTTCTTGGCACCTTCAAG 59.389 52.381 0.00 0.00 39.07 3.02
2810 6517 1.214175 TCCACTTCTTGGCACCTTCAA 59.786 47.619 0.00 0.00 46.47 2.69
2820 6527 5.389859 TGCAAATACCATTCCACTTCTTG 57.610 39.130 0.00 0.00 0.00 3.02
2825 6532 5.133221 GGTCTATGCAAATACCATTCCACT 58.867 41.667 9.22 0.00 32.04 4.00
2827 6534 4.133820 CGGTCTATGCAAATACCATTCCA 58.866 43.478 13.28 0.00 32.04 3.53
2831 6538 3.857157 ACCGGTCTATGCAAATACCAT 57.143 42.857 0.00 0.73 32.04 3.55
2832 6539 3.637911 AACCGGTCTATGCAAATACCA 57.362 42.857 8.04 0.00 32.04 3.25
2836 6543 2.094752 GCACAAACCGGTCTATGCAAAT 60.095 45.455 24.36 0.00 33.27 2.32
2839 6546 0.036164 AGCACAAACCGGTCTATGCA 59.964 50.000 28.40 0.00 35.51 3.96
2840 6547 0.727398 GAGCACAAACCGGTCTATGC 59.273 55.000 22.72 22.72 0.00 3.14
2841 6548 2.271800 GAGAGCACAAACCGGTCTATG 58.728 52.381 8.04 10.66 41.13 2.23
2842 6549 1.135083 CGAGAGCACAAACCGGTCTAT 60.135 52.381 8.04 0.00 41.13 1.98
2868 6779 4.308458 CACCAAGCCGTCCCACGA 62.308 66.667 0.00 0.00 46.05 4.35
2869 6780 4.308458 TCACCAAGCCGTCCCACG 62.308 66.667 0.00 0.00 42.11 4.94
2895 6806 3.266636 CACCAACGCACACCATCTAATA 58.733 45.455 0.00 0.00 0.00 0.98
2896 6807 2.083774 CACCAACGCACACCATCTAAT 58.916 47.619 0.00 0.00 0.00 1.73
2918 6829 4.525487 AGTTTGATGATGTGCCATGAACTT 59.475 37.500 0.00 0.00 31.25 2.66
2921 6832 4.281435 ACAAGTTTGATGATGTGCCATGAA 59.719 37.500 0.00 0.00 0.00 2.57
2924 6835 4.400251 CCTACAAGTTTGATGATGTGCCAT 59.600 41.667 0.00 0.00 0.00 4.40
2927 6838 5.445939 CGTACCTACAAGTTTGATGATGTGC 60.446 44.000 0.00 0.00 0.00 4.57
2943 6854 1.063174 CTGTCGCTACACCGTACCTAC 59.937 57.143 0.00 0.00 0.00 3.18
2949 6860 0.733729 GATCTCTGTCGCTACACCGT 59.266 55.000 0.00 0.00 0.00 4.83
2950 6861 0.316278 CGATCTCTGTCGCTACACCG 60.316 60.000 0.00 0.00 34.56 4.94
2951 6862 3.535691 CGATCTCTGTCGCTACACC 57.464 57.895 0.00 0.00 34.56 4.16
2960 6871 1.336440 CATCTTCCTCGCGATCTCTGT 59.664 52.381 10.36 0.00 0.00 3.41
2961 6872 1.606189 TCATCTTCCTCGCGATCTCTG 59.394 52.381 10.36 3.19 0.00 3.35
2970 6881 3.257393 CAACCTGAAGTCATCTTCCTCG 58.743 50.000 5.68 0.00 46.66 4.63
2971 6882 3.006247 GCAACCTGAAGTCATCTTCCTC 58.994 50.000 5.68 0.00 46.66 3.71
2988 6899 5.897377 AGAGGTTAAATACATGGTGCAAC 57.103 39.130 0.00 0.00 0.00 4.17
3016 7696 4.764172 AGATCGATGTAGCTGCTCTTTTT 58.236 39.130 4.91 0.00 0.00 1.94
3021 7701 3.711086 TGAAAGATCGATGTAGCTGCTC 58.289 45.455 4.91 0.00 0.00 4.26
3094 7774 5.121298 GCAATTTCCTCATTTTCTTTCTGCC 59.879 40.000 0.00 0.00 0.00 4.85
3098 7778 5.990996 TGGTGCAATTTCCTCATTTTCTTTC 59.009 36.000 0.00 0.00 0.00 2.62
3102 7782 6.873076 TGTATTGGTGCAATTTCCTCATTTTC 59.127 34.615 0.00 0.00 35.54 2.29
3131 7812 4.261801 TGCTCTTACCTCAACCATAAAGC 58.738 43.478 0.00 0.00 0.00 3.51
3138 7819 3.618690 AGACATGCTCTTACCTCAACC 57.381 47.619 0.00 0.00 0.00 3.77
3144 7825 6.291377 TGGATTGATTAGACATGCTCTTACC 58.709 40.000 0.00 0.00 0.00 2.85
3170 7851 7.506261 GGAGTAATGAGGAGTTATGAGGTTCTA 59.494 40.741 0.00 0.00 0.00 2.10
3171 7852 6.325286 GGAGTAATGAGGAGTTATGAGGTTCT 59.675 42.308 0.00 0.00 0.00 3.01
3172 7853 6.325286 AGGAGTAATGAGGAGTTATGAGGTTC 59.675 42.308 0.00 0.00 0.00 3.62
3173 7854 6.206042 AGGAGTAATGAGGAGTTATGAGGTT 58.794 40.000 0.00 0.00 0.00 3.50
3174 7855 5.782925 AGGAGTAATGAGGAGTTATGAGGT 58.217 41.667 0.00 0.00 0.00 3.85
3175 7856 6.435904 CCTAGGAGTAATGAGGAGTTATGAGG 59.564 46.154 1.05 0.00 0.00 3.86
3176 7857 6.071616 GCCTAGGAGTAATGAGGAGTTATGAG 60.072 46.154 14.75 0.00 0.00 2.90
3177 7858 5.775701 GCCTAGGAGTAATGAGGAGTTATGA 59.224 44.000 14.75 0.00 0.00 2.15
3178 7859 5.046950 GGCCTAGGAGTAATGAGGAGTTATG 60.047 48.000 14.75 0.00 0.00 1.90
3179 7860 5.088026 GGCCTAGGAGTAATGAGGAGTTAT 58.912 45.833 14.75 0.00 0.00 1.89
3180 7861 4.078805 TGGCCTAGGAGTAATGAGGAGTTA 60.079 45.833 14.75 0.00 0.00 2.24
3181 7862 3.310193 GGCCTAGGAGTAATGAGGAGTT 58.690 50.000 14.75 0.00 0.00 3.01
3182 7863 2.247635 TGGCCTAGGAGTAATGAGGAGT 59.752 50.000 14.75 0.00 0.00 3.85
3183 7864 2.630580 GTGGCCTAGGAGTAATGAGGAG 59.369 54.545 14.75 0.00 0.00 3.69
3184 7865 2.679082 GTGGCCTAGGAGTAATGAGGA 58.321 52.381 14.75 0.00 0.00 3.71
3185 7866 1.694696 GGTGGCCTAGGAGTAATGAGG 59.305 57.143 14.75 0.00 0.00 3.86
3186 7867 1.694696 GGGTGGCCTAGGAGTAATGAG 59.305 57.143 14.75 0.00 0.00 2.90
3187 7868 1.802553 GGGTGGCCTAGGAGTAATGA 58.197 55.000 14.75 0.00 0.00 2.57
3188 7869 0.393077 CGGGTGGCCTAGGAGTAATG 59.607 60.000 14.75 0.00 0.00 1.90
3189 7870 0.263765 TCGGGTGGCCTAGGAGTAAT 59.736 55.000 14.75 0.00 0.00 1.89
3190 7871 0.685458 GTCGGGTGGCCTAGGAGTAA 60.685 60.000 14.75 0.00 0.00 2.24
3191 7872 1.076485 GTCGGGTGGCCTAGGAGTA 60.076 63.158 14.75 0.00 0.00 2.59
3192 7873 2.363925 GTCGGGTGGCCTAGGAGT 60.364 66.667 14.75 0.00 0.00 3.85
3193 7874 3.155167 GGTCGGGTGGCCTAGGAG 61.155 72.222 14.75 0.00 0.00 3.69
3194 7875 4.000620 TGGTCGGGTGGCCTAGGA 62.001 66.667 14.75 0.00 0.00 2.94
3195 7876 3.782443 GTGGTCGGGTGGCCTAGG 61.782 72.222 3.67 3.67 0.00 3.02
3196 7877 2.866523 TAGGTGGTCGGGTGGCCTAG 62.867 65.000 3.32 0.00 0.00 3.02
3197 7878 2.866523 CTAGGTGGTCGGGTGGCCTA 62.867 65.000 3.32 0.00 0.00 3.93
3198 7879 4.326227 TAGGTGGTCGGGTGGCCT 62.326 66.667 3.32 0.00 0.00 5.19
3199 7880 3.782443 CTAGGTGGTCGGGTGGCC 61.782 72.222 0.00 0.00 0.00 5.36
3200 7881 3.001406 ACTAGGTGGTCGGGTGGC 61.001 66.667 0.00 0.00 0.00 5.01
3201 7882 3.295800 GACTAGGTGGTCGGGTGG 58.704 66.667 0.00 0.00 0.00 4.61
3207 7888 1.065928 CGGCATCGACTAGGTGGTC 59.934 63.158 0.00 0.00 39.00 4.02
3208 7889 1.664321 GACGGCATCGACTAGGTGGT 61.664 60.000 0.00 0.00 40.11 4.16
3209 7890 1.065928 GACGGCATCGACTAGGTGG 59.934 63.158 0.00 0.00 40.11 4.61
3210 7891 1.065928 GGACGGCATCGACTAGGTG 59.934 63.158 0.00 0.00 40.11 4.00
3211 7892 1.076923 AGGACGGCATCGACTAGGT 60.077 57.895 0.00 0.00 40.11 3.08
3212 7893 1.655329 GAGGACGGCATCGACTAGG 59.345 63.158 0.00 0.00 40.11 3.02
3213 7894 0.820074 AGGAGGACGGCATCGACTAG 60.820 60.000 0.00 0.00 40.11 2.57
3214 7895 0.818445 GAGGAGGACGGCATCGACTA 60.818 60.000 0.00 0.00 40.11 2.59
3215 7896 2.043852 AGGAGGACGGCATCGACT 60.044 61.111 0.00 0.00 40.11 4.18
3216 7897 2.413765 GAGGAGGACGGCATCGAC 59.586 66.667 0.00 0.00 40.11 4.20
3217 7898 2.833582 GGAGGAGGACGGCATCGA 60.834 66.667 0.00 0.00 40.11 3.59
3218 7899 4.271816 CGGAGGAGGACGGCATCG 62.272 72.222 0.00 0.00 43.02 3.84
3219 7900 2.833582 TCGGAGGAGGACGGCATC 60.834 66.667 0.00 0.00 0.00 3.91
3220 7901 2.835431 CTCGGAGGAGGACGGCAT 60.835 66.667 0.00 0.00 36.61 4.40
3223 7904 1.894756 CTAGCTCGGAGGAGGACGG 60.895 68.421 7.20 0.00 40.80 4.79
3224 7905 0.250553 ATCTAGCTCGGAGGAGGACG 60.251 60.000 7.20 0.00 40.80 4.79
3225 7906 1.883926 GAATCTAGCTCGGAGGAGGAC 59.116 57.143 7.20 0.00 40.80 3.85
3226 7907 1.495148 TGAATCTAGCTCGGAGGAGGA 59.505 52.381 7.20 0.00 40.80 3.71
3227 7908 1.988293 TGAATCTAGCTCGGAGGAGG 58.012 55.000 7.20 0.00 40.80 4.30
3228 7909 4.555262 GATTTGAATCTAGCTCGGAGGAG 58.445 47.826 7.20 0.00 36.62 3.69
3229 7910 3.322254 GGATTTGAATCTAGCTCGGAGGA 59.678 47.826 7.20 0.00 35.73 3.71
3230 7911 3.658709 GGATTTGAATCTAGCTCGGAGG 58.341 50.000 7.20 0.00 35.73 4.30
3231 7912 3.004839 TCGGATTTGAATCTAGCTCGGAG 59.995 47.826 0.00 0.00 35.73 4.63
3232 7913 2.956333 TCGGATTTGAATCTAGCTCGGA 59.044 45.455 0.00 0.00 35.73 4.55
3233 7914 3.371102 TCGGATTTGAATCTAGCTCGG 57.629 47.619 0.00 0.00 35.73 4.63
3234 7915 3.180584 CGTTCGGATTTGAATCTAGCTCG 59.819 47.826 0.00 0.00 35.73 5.03
3235 7916 4.026475 CACGTTCGGATTTGAATCTAGCTC 60.026 45.833 0.00 0.00 35.73 4.09
3236 7917 3.865745 CACGTTCGGATTTGAATCTAGCT 59.134 43.478 0.00 0.00 35.73 3.32
3237 7918 3.001330 CCACGTTCGGATTTGAATCTAGC 59.999 47.826 3.94 0.00 35.73 3.42
3238 7919 3.001330 GCCACGTTCGGATTTGAATCTAG 59.999 47.826 0.00 0.00 35.73 2.43
3239 7920 2.933906 GCCACGTTCGGATTTGAATCTA 59.066 45.455 0.00 0.00 35.73 1.98
3240 7921 1.737793 GCCACGTTCGGATTTGAATCT 59.262 47.619 0.00 0.00 35.73 2.40
3241 7922 1.466950 TGCCACGTTCGGATTTGAATC 59.533 47.619 0.00 0.00 34.66 2.52
3242 7923 1.468520 CTGCCACGTTCGGATTTGAAT 59.531 47.619 0.00 0.00 0.00 2.57
3243 7924 0.871722 CTGCCACGTTCGGATTTGAA 59.128 50.000 0.00 0.00 0.00 2.69
3244 7925 0.250124 ACTGCCACGTTCGGATTTGA 60.250 50.000 0.00 0.00 0.00 2.69
3245 7926 0.110238 CACTGCCACGTTCGGATTTG 60.110 55.000 0.00 0.00 0.00 2.32
3246 7927 1.852067 GCACTGCCACGTTCGGATTT 61.852 55.000 0.00 0.00 0.00 2.17
3247 7928 2.325082 GCACTGCCACGTTCGGATT 61.325 57.895 0.00 0.00 0.00 3.01
3248 7929 2.742372 GCACTGCCACGTTCGGAT 60.742 61.111 0.00 0.00 0.00 4.18
3249 7930 4.228567 TGCACTGCCACGTTCGGA 62.229 61.111 0.00 0.00 0.00 4.55
3250 7931 3.716006 CTGCACTGCCACGTTCGG 61.716 66.667 0.00 0.00 0.00 4.30
3251 7932 4.374702 GCTGCACTGCCACGTTCG 62.375 66.667 0.00 0.00 0.00 3.95
3260 7941 3.114616 CTTCGGTCGGCTGCACTG 61.115 66.667 0.50 0.00 0.00 3.66
3261 7942 4.379243 CCTTCGGTCGGCTGCACT 62.379 66.667 0.50 0.00 0.00 4.40
3265 7946 4.796231 CGTCCCTTCGGTCGGCTG 62.796 72.222 0.00 0.00 37.09 4.85
3273 7954 4.712425 AACCGTCGCGTCCCTTCG 62.712 66.667 5.77 3.01 0.00 3.79
3274 7955 3.110178 CAACCGTCGCGTCCCTTC 61.110 66.667 5.77 0.00 0.00 3.46
3275 7956 3.920196 ACAACCGTCGCGTCCCTT 61.920 61.111 5.77 0.00 0.00 3.95
3276 7957 4.657824 CACAACCGTCGCGTCCCT 62.658 66.667 5.77 0.00 0.00 4.20
3277 7958 4.651008 TCACAACCGTCGCGTCCC 62.651 66.667 5.77 0.00 0.00 4.46
3278 7959 2.654912 CTTCACAACCGTCGCGTCC 61.655 63.158 5.77 0.00 0.00 4.79
3279 7960 1.606350 CTCTTCACAACCGTCGCGTC 61.606 60.000 5.77 0.00 0.00 5.19
3280 7961 1.660575 CTCTTCACAACCGTCGCGT 60.661 57.895 5.77 0.00 0.00 6.01
3281 7962 2.372690 CCTCTTCACAACCGTCGCG 61.373 63.158 0.00 0.00 0.00 5.87
3282 7963 0.389948 ATCCTCTTCACAACCGTCGC 60.390 55.000 0.00 0.00 0.00 5.19
3283 7964 2.163815 ACTATCCTCTTCACAACCGTCG 59.836 50.000 0.00 0.00 0.00 5.12
3284 7965 3.192844 TCACTATCCTCTTCACAACCGTC 59.807 47.826 0.00 0.00 0.00 4.79
3285 7966 3.162666 TCACTATCCTCTTCACAACCGT 58.837 45.455 0.00 0.00 0.00 4.83
3286 7967 3.868757 TCACTATCCTCTTCACAACCG 57.131 47.619 0.00 0.00 0.00 4.44
3287 7968 5.598830 TCCTATCACTATCCTCTTCACAACC 59.401 44.000 0.00 0.00 0.00 3.77
3288 7969 6.239176 CCTCCTATCACTATCCTCTTCACAAC 60.239 46.154 0.00 0.00 0.00 3.32
3289 7970 5.835819 CCTCCTATCACTATCCTCTTCACAA 59.164 44.000 0.00 0.00 0.00 3.33
3290 7971 5.134509 TCCTCCTATCACTATCCTCTTCACA 59.865 44.000 0.00 0.00 0.00 3.58
3291 7972 5.636123 TCCTCCTATCACTATCCTCTTCAC 58.364 45.833 0.00 0.00 0.00 3.18
3292 7973 5.374154 ACTCCTCCTATCACTATCCTCTTCA 59.626 44.000 0.00 0.00 0.00 3.02
3293 7974 5.710099 CACTCCTCCTATCACTATCCTCTTC 59.290 48.000 0.00 0.00 0.00 2.87
3294 7975 5.374154 TCACTCCTCCTATCACTATCCTCTT 59.626 44.000 0.00 0.00 0.00 2.85
3295 7976 4.917040 TCACTCCTCCTATCACTATCCTCT 59.083 45.833 0.00 0.00 0.00 3.69
3296 7977 5.249780 TCACTCCTCCTATCACTATCCTC 57.750 47.826 0.00 0.00 0.00 3.71
3297 7978 5.876691 ATCACTCCTCCTATCACTATCCT 57.123 43.478 0.00 0.00 0.00 3.24
3298 7979 6.601613 CACTATCACTCCTCCTATCACTATCC 59.398 46.154 0.00 0.00 0.00 2.59
3299 7980 7.120579 CACACTATCACTCCTCCTATCACTATC 59.879 44.444 0.00 0.00 0.00 2.08
3300 7981 6.945435 CACACTATCACTCCTCCTATCACTAT 59.055 42.308 0.00 0.00 0.00 2.12
3301 7982 6.101296 TCACACTATCACTCCTCCTATCACTA 59.899 42.308 0.00 0.00 0.00 2.74
3302 7983 5.103898 TCACACTATCACTCCTCCTATCACT 60.104 44.000 0.00 0.00 0.00 3.41
3303 7984 5.133941 TCACACTATCACTCCTCCTATCAC 58.866 45.833 0.00 0.00 0.00 3.06
3304 7985 5.103898 ACTCACACTATCACTCCTCCTATCA 60.104 44.000 0.00 0.00 0.00 2.15
3305 7986 5.240623 CACTCACACTATCACTCCTCCTATC 59.759 48.000 0.00 0.00 0.00 2.08
3306 7987 5.103898 TCACTCACACTATCACTCCTCCTAT 60.104 44.000 0.00 0.00 0.00 2.57
3307 7988 4.227527 TCACTCACACTATCACTCCTCCTA 59.772 45.833 0.00 0.00 0.00 2.94
3308 7989 3.010696 TCACTCACACTATCACTCCTCCT 59.989 47.826 0.00 0.00 0.00 3.69
3309 7990 3.357203 TCACTCACACTATCACTCCTCC 58.643 50.000 0.00 0.00 0.00 4.30
3310 7991 4.461081 AGTTCACTCACACTATCACTCCTC 59.539 45.833 0.00 0.00 0.00 3.71
3311 7992 4.219507 CAGTTCACTCACACTATCACTCCT 59.780 45.833 0.00 0.00 0.00 3.69
3312 7993 4.489810 CAGTTCACTCACACTATCACTCC 58.510 47.826 0.00 0.00 0.00 3.85
3313 7994 4.218635 TCCAGTTCACTCACACTATCACTC 59.781 45.833 0.00 0.00 0.00 3.51
3314 7995 4.152647 TCCAGTTCACTCACACTATCACT 58.847 43.478 0.00 0.00 0.00 3.41
3315 7996 4.021894 ACTCCAGTTCACTCACACTATCAC 60.022 45.833 0.00 0.00 0.00 3.06
3316 7997 4.021981 CACTCCAGTTCACTCACACTATCA 60.022 45.833 0.00 0.00 0.00 2.15
3317 7998 4.489810 CACTCCAGTTCACTCACACTATC 58.510 47.826 0.00 0.00 0.00 2.08
3318 7999 3.259374 CCACTCCAGTTCACTCACACTAT 59.741 47.826 0.00 0.00 0.00 2.12
3319 8000 2.628178 CCACTCCAGTTCACTCACACTA 59.372 50.000 0.00 0.00 0.00 2.74
3320 8001 1.414181 CCACTCCAGTTCACTCACACT 59.586 52.381 0.00 0.00 0.00 3.55
3321 8002 1.871080 CCACTCCAGTTCACTCACAC 58.129 55.000 0.00 0.00 0.00 3.82
3322 8003 0.106708 GCCACTCCAGTTCACTCACA 59.893 55.000 0.00 0.00 0.00 3.58
3323 8004 0.394565 AGCCACTCCAGTTCACTCAC 59.605 55.000 0.00 0.00 0.00 3.51
3324 8005 1.895798 CTAGCCACTCCAGTTCACTCA 59.104 52.381 0.00 0.00 0.00 3.41
3325 8006 1.205893 CCTAGCCACTCCAGTTCACTC 59.794 57.143 0.00 0.00 0.00 3.51
3326 8007 1.270907 CCTAGCCACTCCAGTTCACT 58.729 55.000 0.00 0.00 0.00 3.41
3327 8008 0.250513 CCCTAGCCACTCCAGTTCAC 59.749 60.000 0.00 0.00 0.00 3.18
3328 8009 0.178903 ACCCTAGCCACTCCAGTTCA 60.179 55.000 0.00 0.00 0.00 3.18
3329 8010 0.984995 AACCCTAGCCACTCCAGTTC 59.015 55.000 0.00 0.00 0.00 3.01
3330 8011 2.188817 CTAACCCTAGCCACTCCAGTT 58.811 52.381 0.00 0.00 0.00 3.16
3331 8012 1.622725 CCTAACCCTAGCCACTCCAGT 60.623 57.143 0.00 0.00 0.00 4.00
3332 8013 1.123928 CCTAACCCTAGCCACTCCAG 58.876 60.000 0.00 0.00 0.00 3.86
3333 8014 0.326238 CCCTAACCCTAGCCACTCCA 60.326 60.000 0.00 0.00 0.00 3.86
3334 8015 0.326332 ACCCTAACCCTAGCCACTCC 60.326 60.000 0.00 0.00 0.00 3.85
3335 8016 1.581223 AACCCTAACCCTAGCCACTC 58.419 55.000 0.00 0.00 0.00 3.51
3336 8017 1.633945 CAAACCCTAACCCTAGCCACT 59.366 52.381 0.00 0.00 0.00 4.00
3337 8018 1.631898 TCAAACCCTAACCCTAGCCAC 59.368 52.381 0.00 0.00 0.00 5.01
3338 8019 2.047769 TCAAACCCTAACCCTAGCCA 57.952 50.000 0.00 0.00 0.00 4.75
3339 8020 2.158652 GGATCAAACCCTAACCCTAGCC 60.159 54.545 0.00 0.00 0.00 3.93
3340 8021 2.508300 TGGATCAAACCCTAACCCTAGC 59.492 50.000 0.00 0.00 0.00 3.42
3341 8022 3.780850 AGTGGATCAAACCCTAACCCTAG 59.219 47.826 0.00 0.00 0.00 3.02
3342 8023 3.778629 GAGTGGATCAAACCCTAACCCTA 59.221 47.826 0.00 0.00 0.00 3.53
3343 8024 2.576648 GAGTGGATCAAACCCTAACCCT 59.423 50.000 0.00 0.00 0.00 4.34
3344 8025 2.576648 AGAGTGGATCAAACCCTAACCC 59.423 50.000 0.00 0.00 0.00 4.11
3345 8026 3.610911 CAGAGTGGATCAAACCCTAACC 58.389 50.000 0.00 0.00 0.00 2.85
3346 8027 3.263425 TCCAGAGTGGATCAAACCCTAAC 59.737 47.826 0.00 0.00 42.67 2.34
3347 8028 3.526899 TCCAGAGTGGATCAAACCCTAA 58.473 45.455 0.00 0.00 42.67 2.69
3348 8029 3.199442 TCCAGAGTGGATCAAACCCTA 57.801 47.619 0.00 0.00 42.67 3.53
3349 8030 2.044793 TCCAGAGTGGATCAAACCCT 57.955 50.000 0.00 0.00 42.67 4.34
3358 8039 4.104738 ACAAAATTTCCTCTCCAGAGTGGA 59.895 41.667 13.20 13.20 45.98 4.02
3359 8040 4.217118 CACAAAATTTCCTCTCCAGAGTGG 59.783 45.833 9.09 9.09 42.00 4.00
3360 8041 4.217118 CCACAAAATTTCCTCTCCAGAGTG 59.783 45.833 2.92 0.00 40.48 3.51
3361 8042 4.401925 CCACAAAATTTCCTCTCCAGAGT 58.598 43.478 2.92 0.00 40.48 3.24
3362 8043 3.760684 CCCACAAAATTTCCTCTCCAGAG 59.239 47.826 0.00 0.00 41.71 3.35
3363 8044 3.140144 ACCCACAAAATTTCCTCTCCAGA 59.860 43.478 0.00 0.00 0.00 3.86
3364 8045 3.500343 ACCCACAAAATTTCCTCTCCAG 58.500 45.455 0.00 0.00 0.00 3.86
3365 8046 3.496331 GACCCACAAAATTTCCTCTCCA 58.504 45.455 0.00 0.00 0.00 3.86
3366 8047 2.488153 CGACCCACAAAATTTCCTCTCC 59.512 50.000 0.00 0.00 0.00 3.71
3367 8048 2.488153 CCGACCCACAAAATTTCCTCTC 59.512 50.000 0.00 0.00 0.00 3.20
3368 8049 2.158519 ACCGACCCACAAAATTTCCTCT 60.159 45.455 0.00 0.00 0.00 3.69
3369 8050 2.030274 CACCGACCCACAAAATTTCCTC 60.030 50.000 0.00 0.00 0.00 3.71
3370 8051 1.960689 CACCGACCCACAAAATTTCCT 59.039 47.619 0.00 0.00 0.00 3.36
3371 8052 1.000394 CCACCGACCCACAAAATTTCC 60.000 52.381 0.00 0.00 0.00 3.13
3372 8053 1.684450 ACCACCGACCCACAAAATTTC 59.316 47.619 0.00 0.00 0.00 2.17
3373 8054 1.410882 CACCACCGACCCACAAAATTT 59.589 47.619 0.00 0.00 0.00 1.82
3374 8055 1.036707 CACCACCGACCCACAAAATT 58.963 50.000 0.00 0.00 0.00 1.82
3375 8056 0.825840 CCACCACCGACCCACAAAAT 60.826 55.000 0.00 0.00 0.00 1.82
3376 8057 1.454111 CCACCACCGACCCACAAAA 60.454 57.895 0.00 0.00 0.00 2.44
3377 8058 2.193517 CCACCACCGACCCACAAA 59.806 61.111 0.00 0.00 0.00 2.83
3378 8059 3.879885 CCCACCACCGACCCACAA 61.880 66.667 0.00 0.00 0.00 3.33
3384 8065 3.948719 TTCTGGCCCACCACCGAC 61.949 66.667 0.00 0.00 42.67 4.79
3385 8066 3.948719 GTTCTGGCCCACCACCGA 61.949 66.667 0.00 0.00 42.67 4.69
3386 8067 4.263572 TGTTCTGGCCCACCACCG 62.264 66.667 0.00 0.00 42.67 4.94
3387 8068 2.282462 CTGTTCTGGCCCACCACC 60.282 66.667 0.00 0.00 42.67 4.61
3388 8069 1.152756 AACTGTTCTGGCCCACCAC 60.153 57.895 0.00 0.00 42.67 4.16
3389 8070 1.150536 GAACTGTTCTGGCCCACCA 59.849 57.895 13.13 0.00 46.51 4.17
3390 8071 1.966451 CGAACTGTTCTGGCCCACC 60.966 63.158 17.60 0.00 0.00 4.61
3391 8072 0.534203 TTCGAACTGTTCTGGCCCAC 60.534 55.000 17.60 0.00 0.00 4.61
3392 8073 0.400213 ATTCGAACTGTTCTGGCCCA 59.600 50.000 17.60 0.00 0.00 5.36
3393 8074 0.804989 CATTCGAACTGTTCTGGCCC 59.195 55.000 17.60 0.00 0.00 5.80
3394 8075 1.197721 CACATTCGAACTGTTCTGGCC 59.802 52.381 17.60 0.00 0.00 5.36
3395 8076 1.400242 GCACATTCGAACTGTTCTGGC 60.400 52.381 17.60 10.88 0.00 4.85
3396 8077 2.146342 AGCACATTCGAACTGTTCTGG 58.854 47.619 17.60 4.27 0.00 3.86
3397 8078 4.033358 GGATAGCACATTCGAACTGTTCTG 59.967 45.833 17.60 11.81 0.00 3.02
3398 8079 4.184629 GGATAGCACATTCGAACTGTTCT 58.815 43.478 17.60 8.77 0.00 3.01
3399 8080 3.000322 CGGATAGCACATTCGAACTGTTC 60.000 47.826 10.48 10.48 0.00 3.18
3400 8081 2.930040 CGGATAGCACATTCGAACTGTT 59.070 45.455 0.00 0.00 0.00 3.16
3401 8082 2.540515 CGGATAGCACATTCGAACTGT 58.459 47.619 0.00 3.65 0.00 3.55
3402 8083 1.860950 CCGGATAGCACATTCGAACTG 59.139 52.381 0.00 2.97 0.00 3.16
3403 8084 1.754803 TCCGGATAGCACATTCGAACT 59.245 47.619 0.00 0.00 0.00 3.01
3404 8085 1.859080 GTCCGGATAGCACATTCGAAC 59.141 52.381 7.81 0.00 0.00 3.95
3405 8086 1.535226 CGTCCGGATAGCACATTCGAA 60.535 52.381 7.81 0.00 0.00 3.71
3406 8087 0.030235 CGTCCGGATAGCACATTCGA 59.970 55.000 7.81 0.00 0.00 3.71
3407 8088 0.248907 ACGTCCGGATAGCACATTCG 60.249 55.000 7.81 5.48 0.00 3.34
3408 8089 1.209128 CACGTCCGGATAGCACATTC 58.791 55.000 7.81 0.00 0.00 2.67
3409 8090 0.535335 ACACGTCCGGATAGCACATT 59.465 50.000 7.81 0.00 0.00 2.71
3410 8091 0.179111 CACACGTCCGGATAGCACAT 60.179 55.000 7.81 0.00 0.00 3.21
3411 8092 1.214325 CACACGTCCGGATAGCACA 59.786 57.895 7.81 0.00 0.00 4.57
3412 8093 2.165301 GCACACGTCCGGATAGCAC 61.165 63.158 7.81 0.00 0.00 4.40
3413 8094 2.183300 GCACACGTCCGGATAGCA 59.817 61.111 7.81 0.00 0.00 3.49
3414 8095 1.878522 CAGCACACGTCCGGATAGC 60.879 63.158 7.81 7.95 0.00 2.97
3415 8096 1.878522 GCAGCACACGTCCGGATAG 60.879 63.158 7.81 8.03 0.00 2.08
3416 8097 2.183300 GCAGCACACGTCCGGATA 59.817 61.111 7.81 0.00 0.00 2.59
3417 8098 4.760047 GGCAGCACACGTCCGGAT 62.760 66.667 7.81 0.00 0.00 4.18
3422 8103 3.365291 TATCGGGGCAGCACACGTC 62.365 63.158 0.00 0.00 0.00 4.34
3423 8104 3.371097 CTATCGGGGCAGCACACGT 62.371 63.158 0.00 0.00 0.00 4.49
3424 8105 2.586079 CTATCGGGGCAGCACACG 60.586 66.667 0.00 0.00 0.00 4.49
3425 8106 1.521681 GACTATCGGGGCAGCACAC 60.522 63.158 0.00 0.00 0.00 3.82
3426 8107 0.396556 TAGACTATCGGGGCAGCACA 60.397 55.000 0.00 0.00 0.00 4.57
3427 8108 0.315568 CTAGACTATCGGGGCAGCAC 59.684 60.000 0.00 0.00 0.00 4.40
3428 8109 0.827925 CCTAGACTATCGGGGCAGCA 60.828 60.000 0.00 0.00 0.00 4.41
3429 8110 1.536943 CCCTAGACTATCGGGGCAGC 61.537 65.000 0.00 0.00 34.22 5.25
3430 8111 0.112606 TCCCTAGACTATCGGGGCAG 59.887 60.000 6.91 0.00 38.55 4.85
3431 8112 0.559205 TTCCCTAGACTATCGGGGCA 59.441 55.000 6.91 0.00 38.55 5.36
3432 8113 1.713297 TTTCCCTAGACTATCGGGGC 58.287 55.000 6.91 0.00 38.55 5.80
3433 8114 4.406003 CCATATTTCCCTAGACTATCGGGG 59.594 50.000 6.91 3.44 38.55 5.73
3434 8115 4.406003 CCCATATTTCCCTAGACTATCGGG 59.594 50.000 1.03 1.03 39.41 5.14
3435 8116 5.024118 ACCCATATTTCCCTAGACTATCGG 58.976 45.833 0.00 0.00 0.00 4.18
3436 8117 6.607004 AACCCATATTTCCCTAGACTATCG 57.393 41.667 0.00 0.00 0.00 2.92


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.