Multiple sequence alignment - TraesCS7B01G342300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G342300 chr7B 100.000 2933 0 0 1 2933 597312798 597309866 0.000000e+00 5417.0
1 TraesCS7B01G342300 chr7B 85.494 324 26 9 2224 2540 597252146 597251837 4.720000e-83 318.0
2 TraesCS7B01G342300 chr7B 84.946 93 14 0 145 237 673690610 673690702 8.650000e-16 95.3
3 TraesCS7B01G342300 chr7B 100.000 32 0 0 2526 2557 597310159 597310128 3.160000e-05 60.2
4 TraesCS7B01G342300 chr7B 100.000 32 0 0 2640 2671 597310273 597310242 3.160000e-05 60.2
5 TraesCS7B01G342300 chr7D 88.711 1878 104 56 735 2564 552286445 552284628 0.000000e+00 2194.0
6 TraesCS7B01G342300 chr7D 90.625 128 9 3 543 669 552304875 552304750 1.810000e-37 167.0
7 TraesCS7B01G342300 chr7A 86.029 1768 79 71 543 2234 637949932 637948257 0.000000e+00 1742.0
8 TraesCS7B01G342300 chr7A 82.249 507 74 9 1 504 637950866 637950373 9.720000e-115 424.0
9 TraesCS7B01G342300 chr7A 90.000 310 18 3 2236 2540 637948171 637947870 3.540000e-104 388.0
10 TraesCS7B01G342300 chr7A 91.797 256 12 3 2320 2566 637918434 637918179 6.020000e-92 348.0
11 TraesCS7B01G342300 chr7A 86.802 197 19 5 2739 2933 637919452 637919261 2.290000e-51 213.0
12 TraesCS7B01G342300 chr7A 84.615 104 13 3 32 134 481268695 481268796 1.860000e-17 100.0
13 TraesCS7B01G342300 chr5D 87.179 195 25 0 1719 1913 516787412 516787606 3.800000e-54 222.0
14 TraesCS7B01G342300 chr5D 89.130 46 4 1 2835 2879 517752787 517752832 4.080000e-04 56.5
15 TraesCS7B01G342300 chr5B 87.179 195 25 0 1719 1913 649023680 649023874 3.800000e-54 222.0
16 TraesCS7B01G342300 chr5B 84.783 138 18 2 2 138 228534842 228534707 5.100000e-28 135.0
17 TraesCS7B01G342300 chr5B 82.857 140 21 3 1 140 295117710 295117574 3.970000e-24 122.0
18 TraesCS7B01G342300 chr3B 83.217 143 15 7 1 139 204303518 204303381 3.970000e-24 122.0
19 TraesCS7B01G342300 chr3A 83.212 137 20 2 1 136 470941874 470941740 3.970000e-24 122.0
20 TraesCS7B01G342300 chr5A 82.609 138 17 6 2 136 279495498 279495365 6.640000e-22 115.0
21 TraesCS7B01G342300 chr5A 84.416 77 12 0 178 254 400884141 400884217 3.130000e-10 76.8
22 TraesCS7B01G342300 chr2D 82.443 131 20 3 2 131 619607032 619607160 8.590000e-21 111.0
23 TraesCS7B01G342300 chr4A 81.295 139 22 4 1 138 183764372 183764237 3.090000e-20 110.0
24 TraesCS7B01G342300 chr1A 84.884 86 13 0 178 263 561485270 561485185 1.450000e-13 87.9
25 TraesCS7B01G342300 chr1A 81.000 100 18 1 545 644 568567685 568567587 8.710000e-11 78.7
26 TraesCS7B01G342300 chr6B 75.882 170 36 4 473 637 31698562 31698393 6.740000e-12 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G342300 chr7B 597309866 597312798 2932 True 1845.800000 5417 100.000000 1 2933 3 chr7B.!!$R2 2932
1 TraesCS7B01G342300 chr7D 552284628 552286445 1817 True 2194.000000 2194 88.711000 735 2564 1 chr7D.!!$R1 1829
2 TraesCS7B01G342300 chr7A 637947870 637950866 2996 True 851.333333 1742 86.092667 1 2540 3 chr7A.!!$R2 2539
3 TraesCS7B01G342300 chr7A 637918179 637919452 1273 True 280.500000 348 89.299500 2320 2933 2 chr7A.!!$R1 613

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
171 173 0.033920 CGGCCTGGATCATCAATCGA 59.966 55.0 0.00 0.0 34.99 3.59 F
1686 2158 0.035317 TCACCATGCGAGCAAGAAGT 59.965 50.0 0.57 0.0 0.00 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1715 2188 0.035881 CTCCAGCTTCCTCTGCAACA 59.964 55.0 0.0 0.0 32.87 3.33 R
2892 3505 0.325296 ACCAGCAGGGAATACTCGGA 60.325 55.0 0.0 0.0 41.15 4.55 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 3.260128 AGGACGTAGGGTTTTACCTCTTG 59.740 47.826 0.00 0.00 42.09 3.02
30 31 5.584551 AGGGTTTTACCTCTTGAAGATGT 57.415 39.130 8.16 8.16 38.64 3.06
33 34 4.700692 GGTTTTACCTCTTGAAGATGTCCC 59.299 45.833 6.39 0.86 34.73 4.46
60 61 5.551233 TCTGGGTAAACATTGTCTCTCTTG 58.449 41.667 0.00 0.00 0.00 3.02
67 68 7.173218 GGTAAACATTGTCTCTCTTGTTCATCA 59.827 37.037 0.00 0.00 31.42 3.07
81 82 6.763135 TCTTGTTCATCATGTTACCATCTAGC 59.237 38.462 0.00 0.00 0.00 3.42
97 98 5.396772 CCATCTAGCTAAGACCACCAAATCA 60.397 44.000 0.00 0.00 36.93 2.57
100 102 2.912956 AGCTAAGACCACCAAATCAGGA 59.087 45.455 0.00 0.00 0.00 3.86
107 109 1.064685 CCACCAAATCAGGACCCCTAC 60.065 57.143 0.00 0.00 29.64 3.18
117 119 0.776176 GGACCCCTACCCGAGATCTA 59.224 60.000 0.00 0.00 0.00 1.98
147 149 1.192428 AACTCCGATACCCGAAGCTT 58.808 50.000 0.00 0.00 41.76 3.74
154 156 1.024579 ATACCCGAAGCTTGCAACGG 61.025 55.000 16.90 16.90 44.16 4.44
166 168 1.451927 GCAACGGCCTGGATCATCA 60.452 57.895 0.00 0.00 0.00 3.07
167 169 1.031571 GCAACGGCCTGGATCATCAA 61.032 55.000 0.00 0.00 0.00 2.57
171 173 0.033920 CGGCCTGGATCATCAATCGA 59.966 55.000 0.00 0.00 34.99 3.59
184 186 2.616960 TCAATCGATCAAAGACCACGG 58.383 47.619 0.00 0.00 0.00 4.94
197 199 4.680237 CACGGCCGAGACCAGCAA 62.680 66.667 35.90 0.00 0.00 3.91
258 260 0.543174 GGGAGGTGTGGTCTCTGAGT 60.543 60.000 4.32 0.00 0.00 3.41
271 273 1.179174 TCTGAGTGAGACCACCACGG 61.179 60.000 0.00 0.00 44.22 4.94
272 274 2.048127 GAGTGAGACCACCACGGC 60.048 66.667 0.00 0.00 44.22 5.68
277 279 4.954118 AGACCACCACGGCCCTGA 62.954 66.667 2.94 0.00 39.03 3.86
294 297 0.540365 TGACTCCGGTAACTCCCGTT 60.540 55.000 0.00 0.00 46.66 4.44
296 299 2.027385 GACTCCGGTAACTCCCGTTAT 58.973 52.381 0.00 0.00 46.66 1.89
299 302 2.428171 CTCCGGTAACTCCCGTTATTCA 59.572 50.000 0.00 0.00 46.66 2.57
300 303 3.033184 TCCGGTAACTCCCGTTATTCAT 58.967 45.455 0.00 0.00 46.66 2.57
303 306 4.442472 CCGGTAACTCCCGTTATTCATCTT 60.442 45.833 0.00 0.00 46.66 2.40
306 309 3.840124 ACTCCCGTTATTCATCTTCCC 57.160 47.619 0.00 0.00 0.00 3.97
317 320 4.974438 TCTTCCCCCTGCCCACGT 62.974 66.667 0.00 0.00 0.00 4.49
319 322 4.974438 TTCCCCCTGCCCACGTCT 62.974 66.667 0.00 0.00 0.00 4.18
357 360 2.510238 GCACGCGGATCAAGAGCT 60.510 61.111 12.47 0.00 0.00 4.09
373 376 5.048364 TCAAGAGCTAGCGGAGAAGATAATC 60.048 44.000 9.55 0.00 0.00 1.75
403 406 2.704193 CGCGACGACCACGAAACTC 61.704 63.158 0.00 0.00 42.66 3.01
405 408 1.606350 GCGACGACCACGAAACTCTG 61.606 60.000 0.00 0.00 42.66 3.35
406 409 1.606350 CGACGACCACGAAACTCTGC 61.606 60.000 0.00 0.00 42.66 4.26
409 412 2.665185 ACCACGAAACTCTGCCGC 60.665 61.111 0.00 0.00 0.00 6.53
411 414 2.733218 CACGAAACTCTGCCGCGA 60.733 61.111 8.23 0.00 0.00 5.87
414 417 2.094659 CGAAACTCTGCCGCGACAT 61.095 57.895 8.23 0.00 0.00 3.06
427 430 2.264794 GACATCGCACCCTTCCGT 59.735 61.111 0.00 0.00 0.00 4.69
494 497 4.143333 CCGGCCAGGTGTACGAGG 62.143 72.222 2.24 0.00 34.51 4.63
570 975 8.819974 TCATCCGGTTTTACGTAAAAAGATATC 58.180 33.333 29.61 18.06 37.74 1.63
604 1009 8.527567 GATGAAAATCATCCGGTTTGTTTAAA 57.472 30.769 0.00 0.00 45.66 1.52
605 1010 9.150348 GATGAAAATCATCCGGTTTGTTTAAAT 57.850 29.630 0.00 3.06 45.66 1.40
606 1011 8.894768 TGAAAATCATCCGGTTTGTTTAAATT 57.105 26.923 0.00 0.00 0.00 1.82
607 1012 9.331282 TGAAAATCATCCGGTTTGTTTAAATTT 57.669 25.926 0.00 0.00 0.00 1.82
608 1013 9.592720 GAAAATCATCCGGTTTGTTTAAATTTG 57.407 29.630 0.00 0.00 0.00 2.32
609 1014 8.894768 AAATCATCCGGTTTGTTTAAATTTGA 57.105 26.923 0.00 0.00 0.00 2.69
610 1015 8.894768 AATCATCCGGTTTGTTTAAATTTGAA 57.105 26.923 0.00 0.00 0.00 2.69
611 1016 9.500785 AATCATCCGGTTTGTTTAAATTTGAAT 57.499 25.926 0.00 0.00 0.00 2.57
652 1057 8.674263 TGGTTAAATTTCATTTGCATCAAGTT 57.326 26.923 0.00 0.00 33.82 2.66
670 1076 7.173863 TCAAGTTTTGTCTAGATTTGACGAC 57.826 36.000 0.00 0.00 37.26 4.34
720 1126 1.257743 CGGGATATGGTGTCCGAGAT 58.742 55.000 0.00 0.00 44.69 2.75
730 1136 1.859080 GTGTCCGAGATGCCGTTATTC 59.141 52.381 0.00 0.00 0.00 1.75
765 1171 5.293324 CACAAAATTAGGAGCGCATACACTA 59.707 40.000 11.47 1.02 0.00 2.74
818 1224 1.440060 GTGTCATCCCGTATGCCGA 59.560 57.895 0.00 0.00 39.56 5.54
877 1283 0.336392 GCCCCTCCATTTTTCCCTCT 59.664 55.000 0.00 0.00 0.00 3.69
878 1284 1.686428 GCCCCTCCATTTTTCCCTCTC 60.686 57.143 0.00 0.00 0.00 3.20
879 1285 1.925959 CCCCTCCATTTTTCCCTCTCT 59.074 52.381 0.00 0.00 0.00 3.10
880 1286 2.092158 CCCCTCCATTTTTCCCTCTCTC 60.092 54.545 0.00 0.00 0.00 3.20
881 1287 2.092158 CCCTCCATTTTTCCCTCTCTCC 60.092 54.545 0.00 0.00 0.00 3.71
882 1288 2.849318 CCTCCATTTTTCCCTCTCTCCT 59.151 50.000 0.00 0.00 0.00 3.69
883 1289 3.118075 CCTCCATTTTTCCCTCTCTCCTC 60.118 52.174 0.00 0.00 0.00 3.71
884 1290 3.779738 CTCCATTTTTCCCTCTCTCCTCT 59.220 47.826 0.00 0.00 0.00 3.69
885 1291 3.777522 TCCATTTTTCCCTCTCTCCTCTC 59.222 47.826 0.00 0.00 0.00 3.20
886 1292 3.521126 CCATTTTTCCCTCTCTCCTCTCA 59.479 47.826 0.00 0.00 0.00 3.27
887 1293 4.512484 CATTTTTCCCTCTCTCCTCTCAC 58.488 47.826 0.00 0.00 0.00 3.51
888 1294 2.239681 TTTCCCTCTCTCCTCTCACC 57.760 55.000 0.00 0.00 0.00 4.02
918 1336 1.812571 GCTGCTAGCCTTTTGTGCTTA 59.187 47.619 13.29 0.00 40.23 3.09
921 1339 1.133216 GCTAGCCTTTTGTGCTTAGCC 59.867 52.381 2.29 0.00 40.23 3.93
932 1350 1.135199 GTGCTTAGCCACGCTACACTA 60.135 52.381 0.29 0.00 41.12 2.74
966 1384 2.448582 AAGAACTGGGTCCGCCACA 61.449 57.895 0.00 0.00 36.17 4.17
1119 1548 2.960170 GACGGCGACAGTACCACT 59.040 61.111 16.62 0.00 0.00 4.00
1121 1550 0.523072 GACGGCGACAGTACCACTTA 59.477 55.000 16.62 0.00 0.00 2.24
1250 1679 2.514592 CATGGGCCGCGAGTTCAT 60.515 61.111 8.23 2.82 0.00 2.57
1259 1688 3.113745 CGAGTTCATGGCCATGGC 58.886 61.111 38.81 30.89 39.24 4.40
1263 1692 1.829533 GTTCATGGCCATGGCGGAT 60.830 57.895 38.81 20.87 43.06 4.18
1603 2050 4.457496 AGCAGATCCACACGGCCG 62.457 66.667 26.86 26.86 0.00 6.13
1632 2079 1.402259 CTCAGCAAGATCGAGGTACGT 59.598 52.381 0.00 0.00 43.13 3.57
1633 2080 2.612672 CTCAGCAAGATCGAGGTACGTA 59.387 50.000 0.00 0.00 43.13 3.57
1634 2081 2.353889 TCAGCAAGATCGAGGTACGTAC 59.646 50.000 17.56 17.56 43.13 3.67
1635 2082 2.355132 CAGCAAGATCGAGGTACGTACT 59.645 50.000 24.07 11.06 43.13 2.73
1636 2083 2.613133 AGCAAGATCGAGGTACGTACTC 59.387 50.000 24.07 17.41 43.13 2.59
1637 2084 2.286891 GCAAGATCGAGGTACGTACTCC 60.287 54.545 24.07 14.90 43.13 3.85
1639 2086 4.375272 CAAGATCGAGGTACGTACTCCTA 58.625 47.826 24.07 9.32 43.13 2.94
1641 2088 5.028549 AGATCGAGGTACGTACTCCTAAA 57.971 43.478 24.07 7.01 43.13 1.85
1683 2155 4.604114 CTCACCATGCGAGCAAGA 57.396 55.556 0.57 0.00 0.00 3.02
1685 2157 0.725686 CTCACCATGCGAGCAAGAAG 59.274 55.000 0.57 0.00 0.00 2.85
1686 2158 0.035317 TCACCATGCGAGCAAGAAGT 59.965 50.000 0.57 0.00 0.00 3.01
1688 2160 2.076100 CACCATGCGAGCAAGAAGTAA 58.924 47.619 0.57 0.00 0.00 2.24
1689 2161 2.094894 CACCATGCGAGCAAGAAGTAAG 59.905 50.000 0.57 0.00 0.00 2.34
1691 2163 3.201290 CCATGCGAGCAAGAAGTAAGAT 58.799 45.455 0.57 0.00 0.00 2.40
1695 2167 3.928992 TGCGAGCAAGAAGTAAGATGAAG 59.071 43.478 0.00 0.00 0.00 3.02
1698 2171 5.293079 GCGAGCAAGAAGTAAGATGAAGAAT 59.707 40.000 0.00 0.00 0.00 2.40
1715 2188 2.090775 AGAATTCCTGGTTGGTTTGGGT 60.091 45.455 0.65 0.00 37.07 4.51
2011 2487 7.040340 TCCTACTCTTATCTTTGATCGACATCC 60.040 40.741 0.00 0.00 0.00 3.51
2018 2494 5.089970 TCTTTGATCGACATCCATCTGTT 57.910 39.130 0.00 0.00 0.00 3.16
2019 2495 6.220726 TCTTTGATCGACATCCATCTGTTA 57.779 37.500 0.00 0.00 0.00 2.41
2020 2496 6.042777 TCTTTGATCGACATCCATCTGTTAC 58.957 40.000 0.00 0.00 0.00 2.50
2021 2497 5.598416 TTGATCGACATCCATCTGTTACT 57.402 39.130 0.00 0.00 0.00 2.24
2022 2498 4.936891 TGATCGACATCCATCTGTTACTG 58.063 43.478 0.00 0.00 0.00 2.74
2024 2500 5.592688 TGATCGACATCCATCTGTTACTGTA 59.407 40.000 0.00 0.00 0.00 2.74
2025 2501 6.265422 TGATCGACATCCATCTGTTACTGTAT 59.735 38.462 0.00 0.00 0.00 2.29
2026 2502 5.831997 TCGACATCCATCTGTTACTGTATG 58.168 41.667 0.00 0.00 0.00 2.39
2027 2503 5.359860 TCGACATCCATCTGTTACTGTATGT 59.640 40.000 0.00 0.00 0.00 2.29
2028 2504 6.544564 TCGACATCCATCTGTTACTGTATGTA 59.455 38.462 0.00 0.00 0.00 2.29
2029 2505 7.230712 TCGACATCCATCTGTTACTGTATGTAT 59.769 37.037 0.00 0.00 0.00 2.29
2030 2506 7.867909 CGACATCCATCTGTTACTGTATGTATT 59.132 37.037 0.00 0.00 0.00 1.89
2032 2508 9.982651 ACATCCATCTGTTACTGTATGTATTAC 57.017 33.333 0.00 0.00 0.00 1.89
2063 2539 6.070995 CCAGGGATGTAACTGTACAGAGTTTA 60.071 42.308 29.30 14.24 43.42 2.01
2068 2544 9.048446 GGATGTAACTGTACAGAGTTTAAAACA 57.952 33.333 29.30 14.85 43.42 2.83
2071 2547 8.757789 TGTAACTGTACAGAGTTTAAAACATCG 58.242 33.333 29.30 0.00 37.38 3.84
2072 2548 6.780706 ACTGTACAGAGTTTAAAACATCGG 57.219 37.500 29.30 0.00 0.00 4.18
2088 2564 1.448985 TCGGATTTGCTGGCTTGTAC 58.551 50.000 0.00 0.00 0.00 2.90
2089 2565 1.003118 TCGGATTTGCTGGCTTGTACT 59.997 47.619 0.00 0.00 0.00 2.73
2090 2566 2.235155 TCGGATTTGCTGGCTTGTACTA 59.765 45.455 0.00 0.00 0.00 1.82
2119 2599 9.832445 ACTGTATATTATTGAGAACATTTCCGT 57.168 29.630 0.00 0.00 0.00 4.69
2126 2606 9.667107 ATTATTGAGAACATTTCCGTTAGAAGA 57.333 29.630 0.00 0.00 35.40 2.87
2128 2608 6.968131 TGAGAACATTTCCGTTAGAAGATG 57.032 37.500 0.00 0.00 35.40 2.90
2130 2610 4.636206 AGAACATTTCCGTTAGAAGATGGC 59.364 41.667 0.00 0.00 35.40 4.40
2132 2612 4.589908 ACATTTCCGTTAGAAGATGGCTT 58.410 39.130 0.00 0.00 35.40 4.35
2165 2676 4.789012 TCATTTGGCATGACTTTTCTCC 57.211 40.909 0.00 0.00 0.00 3.71
2224 2739 2.777692 TCTCATACCCATTCTTGTCCCC 59.222 50.000 0.00 0.00 0.00 4.81
2301 2900 1.635663 CGAGGCCCTTACTTTGCGTG 61.636 60.000 0.00 0.00 0.00 5.34
2312 2911 1.134640 ACTTTGCGTGTGGTGTGACTA 60.135 47.619 0.00 0.00 0.00 2.59
2313 2912 1.526887 CTTTGCGTGTGGTGTGACTAG 59.473 52.381 0.00 0.00 0.00 2.57
2315 2914 1.300620 GCGTGTGGTGTGACTAGCA 60.301 57.895 0.00 0.00 0.00 3.49
2319 2918 1.376037 GTGGTGTGACTAGCAGGCC 60.376 63.158 0.00 0.00 0.00 5.19
2321 2920 1.374947 GGTGTGACTAGCAGGCCAA 59.625 57.895 5.01 0.00 0.00 4.52
2323 2922 0.035458 GTGTGACTAGCAGGCCAAGT 59.965 55.000 5.01 2.10 0.00 3.16
2407 3011 0.618393 ATTTCCATGGCCTTGGTGGG 60.618 55.000 31.09 11.37 38.01 4.61
2410 3014 1.076777 CCATGGCCTTGGTGGGTAG 60.077 63.158 26.14 2.31 36.00 3.18
2540 3153 0.392863 TTGGATCCCACTGCGTGATG 60.393 55.000 9.90 2.27 35.23 3.07
2566 3179 4.457257 GTGCTATGGATATTCAAGCCCTTC 59.543 45.833 12.73 2.37 32.14 3.46
2567 3180 4.352001 TGCTATGGATATTCAAGCCCTTCT 59.648 41.667 12.73 0.00 32.14 2.85
2568 3181 4.940654 GCTATGGATATTCAAGCCCTTCTC 59.059 45.833 6.83 0.00 0.00 2.87
2569 3182 3.475566 TGGATATTCAAGCCCTTCTCG 57.524 47.619 0.00 0.00 0.00 4.04
2570 3183 2.147150 GGATATTCAAGCCCTTCTCGC 58.853 52.381 0.00 0.00 0.00 5.03
2571 3184 2.485479 GGATATTCAAGCCCTTCTCGCA 60.485 50.000 0.00 0.00 0.00 5.10
2572 3185 2.779755 TATTCAAGCCCTTCTCGCAA 57.220 45.000 0.00 0.00 0.00 4.85
2573 3186 1.168714 ATTCAAGCCCTTCTCGCAAC 58.831 50.000 0.00 0.00 0.00 4.17
2574 3187 0.179032 TTCAAGCCCTTCTCGCAACA 60.179 50.000 0.00 0.00 0.00 3.33
2575 3188 0.179032 TCAAGCCCTTCTCGCAACAA 60.179 50.000 0.00 0.00 0.00 2.83
2576 3189 0.040067 CAAGCCCTTCTCGCAACAAC 60.040 55.000 0.00 0.00 0.00 3.32
2577 3190 0.465460 AAGCCCTTCTCGCAACAACA 60.465 50.000 0.00 0.00 0.00 3.33
2578 3191 0.465460 AGCCCTTCTCGCAACAACAA 60.465 50.000 0.00 0.00 0.00 2.83
2579 3192 0.317854 GCCCTTCTCGCAACAACAAC 60.318 55.000 0.00 0.00 0.00 3.32
2580 3193 1.021202 CCCTTCTCGCAACAACAACA 58.979 50.000 0.00 0.00 0.00 3.33
2581 3194 1.403679 CCCTTCTCGCAACAACAACAA 59.596 47.619 0.00 0.00 0.00 2.83
2582 3195 2.159310 CCCTTCTCGCAACAACAACAAA 60.159 45.455 0.00 0.00 0.00 2.83
2583 3196 3.506810 CCTTCTCGCAACAACAACAAAA 58.493 40.909 0.00 0.00 0.00 2.44
2584 3197 3.923461 CCTTCTCGCAACAACAACAAAAA 59.077 39.130 0.00 0.00 0.00 1.94
2621 3234 6.044512 GAATATTTTCGTATTCCACTGCGT 57.955 37.500 0.00 0.00 35.83 5.24
2622 3235 3.740044 ATTTTCGTATTCCACTGCGTG 57.260 42.857 2.27 2.27 0.00 5.34
2623 3236 2.442212 TTTCGTATTCCACTGCGTGA 57.558 45.000 9.75 0.00 35.23 4.35
2624 3237 2.665649 TTCGTATTCCACTGCGTGAT 57.334 45.000 9.75 0.67 35.23 3.06
2625 3238 1.921243 TCGTATTCCACTGCGTGATG 58.079 50.000 9.75 0.00 35.23 3.07
2626 3239 0.301687 CGTATTCCACTGCGTGATGC 59.698 55.000 9.75 0.00 46.70 3.91
2627 3240 0.657840 GTATTCCACTGCGTGATGCC 59.342 55.000 9.75 0.00 45.60 4.40
2628 3241 0.809636 TATTCCACTGCGTGATGCCG 60.810 55.000 9.75 0.00 45.60 5.69
2629 3242 2.803155 ATTCCACTGCGTGATGCCGT 62.803 55.000 9.75 0.00 45.60 5.68
2632 3245 4.687215 ACTGCGTGATGCCGTGCT 62.687 61.111 0.00 0.00 45.60 4.40
2633 3246 2.509111 CTGCGTGATGCCGTGCTA 60.509 61.111 0.00 0.00 45.60 3.49
2634 3247 1.884464 CTGCGTGATGCCGTGCTAT 60.884 57.895 0.00 0.00 45.60 2.97
2635 3248 2.097661 CTGCGTGATGCCGTGCTATG 62.098 60.000 0.00 0.00 45.60 2.23
2636 3249 1.882625 GCGTGATGCCGTGCTATGA 60.883 57.895 0.00 0.00 37.76 2.15
2637 3250 1.428370 GCGTGATGCCGTGCTATGAA 61.428 55.000 0.00 0.00 37.76 2.57
2638 3251 1.220529 CGTGATGCCGTGCTATGAAT 58.779 50.000 0.00 0.00 0.00 2.57
2639 3252 2.403259 CGTGATGCCGTGCTATGAATA 58.597 47.619 0.00 0.00 0.00 1.75
2640 3253 2.995939 CGTGATGCCGTGCTATGAATAT 59.004 45.455 0.00 0.00 0.00 1.28
2641 3254 3.061295 CGTGATGCCGTGCTATGAATATC 59.939 47.826 0.00 0.00 0.00 1.63
2642 3255 3.372206 GTGATGCCGTGCTATGAATATCC 59.628 47.826 0.00 0.00 0.00 2.59
2643 3256 2.472695 TGCCGTGCTATGAATATCCC 57.527 50.000 0.00 0.00 0.00 3.85
2644 3257 1.696884 TGCCGTGCTATGAATATCCCA 59.303 47.619 0.00 0.00 0.00 4.37
2645 3258 2.076863 GCCGTGCTATGAATATCCCAC 58.923 52.381 0.00 0.00 0.00 4.61
2646 3259 2.289694 GCCGTGCTATGAATATCCCACT 60.290 50.000 0.00 0.00 0.00 4.00
2647 3260 3.329386 CCGTGCTATGAATATCCCACTG 58.671 50.000 0.00 0.00 0.00 3.66
2648 3261 2.738846 CGTGCTATGAATATCCCACTGC 59.261 50.000 0.00 0.00 0.00 4.40
2649 3262 2.738846 GTGCTATGAATATCCCACTGCG 59.261 50.000 0.00 0.00 0.00 5.18
2650 3263 2.368548 TGCTATGAATATCCCACTGCGT 59.631 45.455 0.00 0.00 0.00 5.24
2651 3264 2.738846 GCTATGAATATCCCACTGCGTG 59.261 50.000 2.27 2.27 0.00 5.34
2652 3265 3.554960 GCTATGAATATCCCACTGCGTGA 60.555 47.826 9.75 0.00 35.23 4.35
2653 3266 3.777106 ATGAATATCCCACTGCGTGAT 57.223 42.857 9.75 0.67 35.23 3.06
2654 3267 2.837498 TGAATATCCCACTGCGTGATG 58.163 47.619 9.75 2.27 35.23 3.07
2655 3268 1.532868 GAATATCCCACTGCGTGATGC 59.467 52.381 9.75 0.00 46.70 3.91
2656 3269 0.250467 ATATCCCACTGCGTGATGCC 60.250 55.000 9.75 0.00 45.60 4.40
2657 3270 2.642996 TATCCCACTGCGTGATGCCG 62.643 60.000 9.75 0.00 45.60 5.69
2661 3274 4.687215 ACTGCGTGATGCCGTGCT 62.687 61.111 0.00 0.00 45.60 4.40
2662 3275 2.509111 CTGCGTGATGCCGTGCTA 60.509 61.111 0.00 0.00 45.60 3.49
2663 3276 1.884464 CTGCGTGATGCCGTGCTAT 60.884 57.895 0.00 0.00 45.60 2.97
2664 3277 2.097661 CTGCGTGATGCCGTGCTATG 62.098 60.000 0.00 0.00 45.60 2.23
2665 3278 2.885676 GCGTGATGCCGTGCTATGG 61.886 63.158 0.00 0.00 37.76 2.74
2666 3279 1.227234 CGTGATGCCGTGCTATGGA 60.227 57.895 0.00 0.00 0.00 3.41
2667 3280 0.601046 CGTGATGCCGTGCTATGGAT 60.601 55.000 0.00 0.00 0.00 3.41
2668 3281 1.336795 CGTGATGCCGTGCTATGGATA 60.337 52.381 0.00 0.00 0.00 2.59
2669 3282 2.675032 CGTGATGCCGTGCTATGGATAT 60.675 50.000 0.00 0.00 0.00 1.63
2670 3283 3.338249 GTGATGCCGTGCTATGGATATT 58.662 45.455 0.00 0.00 0.00 1.28
2671 3284 4.503910 GTGATGCCGTGCTATGGATATTA 58.496 43.478 0.00 0.00 0.00 0.98
2672 3285 5.118990 GTGATGCCGTGCTATGGATATTAT 58.881 41.667 0.00 0.00 0.00 1.28
2673 3286 5.586243 GTGATGCCGTGCTATGGATATTATT 59.414 40.000 0.00 0.00 0.00 1.40
2674 3287 6.094048 GTGATGCCGTGCTATGGATATTATTT 59.906 38.462 0.00 0.00 0.00 1.40
2675 3288 6.658816 TGATGCCGTGCTATGGATATTATTTT 59.341 34.615 0.00 0.00 0.00 1.82
2676 3289 6.494893 TGCCGTGCTATGGATATTATTTTC 57.505 37.500 0.00 0.00 0.00 2.29
2677 3290 5.414454 TGCCGTGCTATGGATATTATTTTCC 59.586 40.000 0.00 0.00 0.00 3.13
2678 3291 5.414454 GCCGTGCTATGGATATTATTTTCCA 59.586 40.000 0.17 0.17 45.69 3.53
2679 3292 6.072175 GCCGTGCTATGGATATTATTTTCCAA 60.072 38.462 1.64 0.00 44.83 3.53
2680 3293 7.530010 CCGTGCTATGGATATTATTTTCCAAG 58.470 38.462 1.64 3.01 44.83 3.61
2681 3294 7.174946 CCGTGCTATGGATATTATTTTCCAAGT 59.825 37.037 1.64 0.00 44.83 3.16
2682 3295 8.567948 CGTGCTATGGATATTATTTTCCAAGTT 58.432 33.333 1.64 0.00 44.83 2.66
2803 3416 6.441093 CTGAATTACAGCCATTCTGCTAAA 57.559 37.500 0.00 0.00 46.76 1.85
2804 3417 7.035840 CTGAATTACAGCCATTCTGCTAAAT 57.964 36.000 0.00 0.00 46.76 1.40
2805 3418 7.408756 TGAATTACAGCCATTCTGCTAAATT 57.591 32.000 0.00 0.00 46.76 1.82
2806 3419 7.483307 TGAATTACAGCCATTCTGCTAAATTC 58.517 34.615 17.44 17.44 46.76 2.17
2807 3420 7.340232 TGAATTACAGCCATTCTGCTAAATTCT 59.660 33.333 21.15 2.00 46.76 2.40
2808 3421 7.651027 ATTACAGCCATTCTGCTAAATTCTT 57.349 32.000 0.00 0.00 46.76 2.52
2809 3422 5.990120 ACAGCCATTCTGCTAAATTCTTT 57.010 34.783 0.00 0.00 46.76 2.52
2810 3423 8.574251 TTACAGCCATTCTGCTAAATTCTTTA 57.426 30.769 0.00 0.00 46.76 1.85
2811 3424 7.651027 ACAGCCATTCTGCTAAATTCTTTAT 57.349 32.000 0.00 0.00 46.76 1.40
2812 3425 8.071177 ACAGCCATTCTGCTAAATTCTTTATT 57.929 30.769 0.00 0.00 46.76 1.40
2813 3426 7.977853 ACAGCCATTCTGCTAAATTCTTTATTG 59.022 33.333 0.00 0.00 46.76 1.90
2814 3427 8.192774 CAGCCATTCTGCTAAATTCTTTATTGA 58.807 33.333 0.00 0.00 40.32 2.57
2815 3428 8.752187 AGCCATTCTGCTAAATTCTTTATTGAA 58.248 29.630 0.00 0.00 40.56 2.69
2816 3429 9.369904 GCCATTCTGCTAAATTCTTTATTGAAA 57.630 29.630 0.00 0.00 0.00 2.69
2843 3456 4.976224 AAATGCCCGTGAAATTACTACC 57.024 40.909 0.00 0.00 0.00 3.18
2844 3457 3.926058 ATGCCCGTGAAATTACTACCT 57.074 42.857 0.00 0.00 0.00 3.08
2845 3458 3.255969 TGCCCGTGAAATTACTACCTC 57.744 47.619 0.00 0.00 0.00 3.85
2846 3459 2.093341 TGCCCGTGAAATTACTACCTCC 60.093 50.000 0.00 0.00 0.00 4.30
2847 3460 2.093341 GCCCGTGAAATTACTACCTCCA 60.093 50.000 0.00 0.00 0.00 3.86
2848 3461 3.433173 GCCCGTGAAATTACTACCTCCAT 60.433 47.826 0.00 0.00 0.00 3.41
2849 3462 4.377897 CCCGTGAAATTACTACCTCCATC 58.622 47.826 0.00 0.00 0.00 3.51
2850 3463 4.101119 CCCGTGAAATTACTACCTCCATCT 59.899 45.833 0.00 0.00 0.00 2.90
2851 3464 5.290386 CCGTGAAATTACTACCTCCATCTC 58.710 45.833 0.00 0.00 0.00 2.75
2852 3465 5.163447 CCGTGAAATTACTACCTCCATCTCA 60.163 44.000 0.00 0.00 0.00 3.27
2853 3466 6.338146 CGTGAAATTACTACCTCCATCTCAA 58.662 40.000 0.00 0.00 0.00 3.02
2854 3467 6.816640 CGTGAAATTACTACCTCCATCTCAAA 59.183 38.462 0.00 0.00 0.00 2.69
2855 3468 7.333423 CGTGAAATTACTACCTCCATCTCAAAA 59.667 37.037 0.00 0.00 0.00 2.44
2856 3469 9.178758 GTGAAATTACTACCTCCATCTCAAAAT 57.821 33.333 0.00 0.00 0.00 1.82
2864 3477 9.213777 ACTACCTCCATCTCAAAATATAAGACA 57.786 33.333 0.00 0.00 0.00 3.41
2865 3478 9.482627 CTACCTCCATCTCAAAATATAAGACAC 57.517 37.037 0.00 0.00 0.00 3.67
2866 3479 8.095452 ACCTCCATCTCAAAATATAAGACACT 57.905 34.615 0.00 0.00 0.00 3.55
2867 3480 8.552296 ACCTCCATCTCAAAATATAAGACACTT 58.448 33.333 0.00 0.00 0.00 3.16
2868 3481 8.834465 CCTCCATCTCAAAATATAAGACACTTG 58.166 37.037 0.00 0.00 0.00 3.16
2869 3482 9.388506 CTCCATCTCAAAATATAAGACACTTGT 57.611 33.333 0.00 0.00 0.00 3.16
2870 3483 9.166173 TCCATCTCAAAATATAAGACACTTGTG 57.834 33.333 0.00 0.00 0.00 3.33
2871 3484 8.400947 CCATCTCAAAATATAAGACACTTGTGG 58.599 37.037 5.72 0.00 0.00 4.17
2872 3485 9.166173 CATCTCAAAATATAAGACACTTGTGGA 57.834 33.333 5.72 0.00 0.00 4.02
2873 3486 8.547967 TCTCAAAATATAAGACACTTGTGGAC 57.452 34.615 5.72 0.00 0.00 4.02
2874 3487 8.375506 TCTCAAAATATAAGACACTTGTGGACT 58.624 33.333 5.72 1.97 0.00 3.85
2875 3488 9.653287 CTCAAAATATAAGACACTTGTGGACTA 57.347 33.333 5.72 0.00 0.00 2.59
2876 3489 9.653287 TCAAAATATAAGACACTTGTGGACTAG 57.347 33.333 5.72 0.00 0.00 2.57
2877 3490 9.436957 CAAAATATAAGACACTTGTGGACTAGT 57.563 33.333 0.00 0.00 32.36 2.57
2906 3519 7.986085 ATAAATTCATTCCGAGTATTCCCTG 57.014 36.000 0.00 0.00 0.00 4.45
2907 3520 2.910688 TCATTCCGAGTATTCCCTGC 57.089 50.000 0.00 0.00 0.00 4.85
2908 3521 2.398588 TCATTCCGAGTATTCCCTGCT 58.601 47.619 0.00 0.00 0.00 4.24
2909 3522 2.103094 TCATTCCGAGTATTCCCTGCTG 59.897 50.000 0.00 0.00 0.00 4.41
2910 3523 0.830648 TTCCGAGTATTCCCTGCTGG 59.169 55.000 1.89 1.89 0.00 4.85
2911 3524 0.325296 TCCGAGTATTCCCTGCTGGT 60.325 55.000 9.00 0.00 34.77 4.00
2912 3525 0.541863 CCGAGTATTCCCTGCTGGTT 59.458 55.000 9.00 0.00 34.77 3.67
2913 3526 1.065418 CCGAGTATTCCCTGCTGGTTT 60.065 52.381 9.00 0.00 34.77 3.27
2914 3527 2.618045 CCGAGTATTCCCTGCTGGTTTT 60.618 50.000 9.00 0.00 34.77 2.43
2915 3528 2.420022 CGAGTATTCCCTGCTGGTTTTG 59.580 50.000 9.00 0.00 34.77 2.44
2916 3529 3.686016 GAGTATTCCCTGCTGGTTTTGA 58.314 45.455 9.00 0.00 34.77 2.69
2917 3530 4.273318 GAGTATTCCCTGCTGGTTTTGAT 58.727 43.478 9.00 0.00 34.77 2.57
2918 3531 4.019174 AGTATTCCCTGCTGGTTTTGATG 58.981 43.478 9.00 0.00 34.77 3.07
2919 3532 2.380064 TTCCCTGCTGGTTTTGATGT 57.620 45.000 9.00 0.00 34.77 3.06
2920 3533 2.380064 TCCCTGCTGGTTTTGATGTT 57.620 45.000 9.00 0.00 34.77 2.71
2921 3534 2.676748 TCCCTGCTGGTTTTGATGTTT 58.323 42.857 9.00 0.00 34.77 2.83
2922 3535 3.838565 TCCCTGCTGGTTTTGATGTTTA 58.161 40.909 9.00 0.00 34.77 2.01
2923 3536 4.415596 TCCCTGCTGGTTTTGATGTTTAT 58.584 39.130 9.00 0.00 34.77 1.40
2924 3537 5.575157 TCCCTGCTGGTTTTGATGTTTATA 58.425 37.500 9.00 0.00 34.77 0.98
2925 3538 5.417580 TCCCTGCTGGTTTTGATGTTTATAC 59.582 40.000 9.00 0.00 34.77 1.47
2926 3539 5.184864 CCCTGCTGGTTTTGATGTTTATACA 59.815 40.000 9.00 0.00 38.95 2.29
2927 3540 6.295011 CCCTGCTGGTTTTGATGTTTATACAA 60.295 38.462 9.00 0.00 37.91 2.41
2928 3541 7.151308 CCTGCTGGTTTTGATGTTTATACAAA 58.849 34.615 0.51 0.00 37.91 2.83
2929 3542 7.818930 CCTGCTGGTTTTGATGTTTATACAAAT 59.181 33.333 0.51 0.00 37.91 2.32
2930 3543 9.206870 CTGCTGGTTTTGATGTTTATACAAATT 57.793 29.630 0.00 0.00 37.91 1.82
2931 3544 9.553064 TGCTGGTTTTGATGTTTATACAAATTT 57.447 25.926 0.00 0.00 37.91 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 4.525912 TCAAGAGGTAAAACCCTACGTC 57.474 45.455 0.00 0.00 39.75 4.34
17 18 4.639310 CAGATTTGGGACATCTTCAAGAGG 59.361 45.833 0.00 0.00 39.30 3.69
33 34 6.656693 AGAGAGACAATGTTTACCCAGATTTG 59.343 38.462 0.00 0.00 0.00 2.32
50 51 6.166279 GGTAACATGATGAACAAGAGAGACA 58.834 40.000 0.00 0.00 0.00 3.41
81 82 3.610911 GGTCCTGATTTGGTGGTCTTAG 58.389 50.000 0.00 0.00 0.00 2.18
97 98 1.000041 AGATCTCGGGTAGGGGTCCT 61.000 60.000 0.00 0.00 37.71 3.85
100 102 1.572415 TGTTAGATCTCGGGTAGGGGT 59.428 52.381 0.00 0.00 0.00 4.95
107 109 3.454371 AAATCCGTGTTAGATCTCGGG 57.546 47.619 17.68 6.05 42.37 5.14
147 149 1.451927 GATGATCCAGGCCGTTGCA 60.452 57.895 0.00 0.00 40.13 4.08
154 156 3.049708 TGATCGATTGATGATCCAGGC 57.950 47.619 0.00 0.00 41.22 4.85
166 168 1.369625 GCCGTGGTCTTTGATCGATT 58.630 50.000 0.00 0.00 0.00 3.34
167 169 0.462047 GGCCGTGGTCTTTGATCGAT 60.462 55.000 0.00 0.00 0.00 3.59
171 173 1.079127 CTCGGCCGTGGTCTTTGAT 60.079 57.895 27.15 0.00 0.00 2.57
215 217 1.715862 CTTCGCCATCTCCTCGTCGA 61.716 60.000 0.00 0.00 0.00 4.20
220 222 1.001406 CCCATACTTCGCCATCTCCTC 59.999 57.143 0.00 0.00 0.00 3.71
258 260 4.954118 AGGGCCGTGGTGGTCTCA 62.954 66.667 0.00 0.00 44.07 3.27
271 273 1.516423 GAGTTACCGGAGTCAGGGC 59.484 63.158 9.46 3.77 0.00 5.19
272 274 1.328430 GGGAGTTACCGGAGTCAGGG 61.328 65.000 9.46 6.10 40.11 4.45
294 297 1.149101 GGGCAGGGGGAAGATGAATA 58.851 55.000 0.00 0.00 0.00 1.75
296 299 1.543642 TGGGCAGGGGGAAGATGAA 60.544 57.895 0.00 0.00 0.00 2.57
299 302 3.411517 CGTGGGCAGGGGGAAGAT 61.412 66.667 0.00 0.00 0.00 2.40
300 303 4.974438 ACGTGGGCAGGGGGAAGA 62.974 66.667 0.00 0.00 0.00 2.87
342 345 1.066587 GCTAGCTCTTGATCCGCGT 59.933 57.895 7.70 0.00 0.00 6.01
347 350 2.621055 TCTTCTCCGCTAGCTCTTGATC 59.379 50.000 13.93 0.00 0.00 2.92
349 352 2.130272 TCTTCTCCGCTAGCTCTTGA 57.870 50.000 13.93 2.94 0.00 3.02
376 379 4.994201 GTCGTCGCGTGGTGCTCA 62.994 66.667 5.77 0.00 43.27 4.26
388 391 1.282930 GGCAGAGTTTCGTGGTCGTC 61.283 60.000 0.00 0.00 38.33 4.20
409 412 2.885644 CGGAAGGGTGCGATGTCG 60.886 66.667 0.00 0.00 41.88 4.35
411 414 2.264794 GACGGAAGGGTGCGATGT 59.735 61.111 0.00 0.00 41.88 3.06
427 430 2.261671 GAGTCGGGCTTTCAGCGA 59.738 61.111 0.00 0.00 43.62 4.93
432 435 2.506438 CGTCGGAGTCGGGCTTTC 60.506 66.667 0.55 0.00 35.06 2.62
445 448 4.907034 CCTCCATCGCGGTCGTCG 62.907 72.222 6.13 0.00 42.76 5.12
477 480 4.143333 CCTCGTACACCTGGCCGG 62.143 72.222 3.88 3.88 39.35 6.13
480 483 1.080025 GTGACCTCGTACACCTGGC 60.080 63.158 0.00 0.00 0.00 4.85
527 548 6.128007 ACCGGATGATATTTTGTTCACTGAAC 60.128 38.462 9.46 14.10 42.26 3.18
529 550 5.496556 ACCGGATGATATTTTGTTCACTGA 58.503 37.500 9.46 0.00 0.00 3.41
532 553 7.217447 CGTAAAACCGGATGATATTTTGTTCAC 59.783 37.037 9.46 0.00 0.00 3.18
533 554 7.094720 ACGTAAAACCGGATGATATTTTGTTCA 60.095 33.333 9.46 0.00 0.00 3.18
535 556 7.148355 ACGTAAAACCGGATGATATTTTGTT 57.852 32.000 9.46 0.00 0.00 2.83
589 994 8.769891 GTTGATTCAAATTTAAACAAACCGGAT 58.230 29.630 9.46 0.00 0.00 4.18
652 1057 5.227908 GGACAGTCGTCAAATCTAGACAAA 58.772 41.667 0.00 0.00 44.54 2.83
720 1126 2.689083 CCGCTGATGAATAACGGCA 58.311 52.632 0.00 0.00 37.05 5.69
730 1136 0.733566 AATTTTGTGCGCCGCTGATG 60.734 50.000 11.67 0.00 0.00 3.07
765 1171 1.153628 GGGCTCTGTAATCGCGTGT 60.154 57.895 5.77 0.00 0.00 4.49
818 1224 0.677842 GGGATAACGACTATGCCGGT 59.322 55.000 1.90 0.00 38.59 5.28
877 1283 1.862138 TGGGAGGGGTGAGAGGAGA 60.862 63.158 0.00 0.00 0.00 3.71
878 1284 1.687493 GTGGGAGGGGTGAGAGGAG 60.687 68.421 0.00 0.00 0.00 3.69
879 1285 2.177518 AGTGGGAGGGGTGAGAGGA 61.178 63.158 0.00 0.00 0.00 3.71
880 1286 1.992277 CAGTGGGAGGGGTGAGAGG 60.992 68.421 0.00 0.00 0.00 3.69
881 1287 2.664081 GCAGTGGGAGGGGTGAGAG 61.664 68.421 0.00 0.00 0.00 3.20
882 1288 2.607750 GCAGTGGGAGGGGTGAGA 60.608 66.667 0.00 0.00 0.00 3.27
883 1289 2.608988 AGCAGTGGGAGGGGTGAG 60.609 66.667 0.00 0.00 0.00 3.51
884 1290 2.930019 CAGCAGTGGGAGGGGTGA 60.930 66.667 0.00 0.00 32.03 4.02
885 1291 4.729918 GCAGCAGTGGGAGGGGTG 62.730 72.222 0.00 0.00 0.00 4.61
886 1292 3.562681 TAGCAGCAGTGGGAGGGGT 62.563 63.158 0.00 0.00 0.00 4.95
887 1293 2.688666 TAGCAGCAGTGGGAGGGG 60.689 66.667 0.00 0.00 0.00 4.79
888 1294 2.906458 CTAGCAGCAGTGGGAGGG 59.094 66.667 0.00 0.00 0.00 4.30
918 1336 0.682852 TTGGTTAGTGTAGCGTGGCT 59.317 50.000 0.00 0.00 43.41 4.75
921 1339 2.288579 TGGAGTTGGTTAGTGTAGCGTG 60.289 50.000 0.00 0.00 0.00 5.34
932 1350 1.518367 TCTTGGAGGTGGAGTTGGTT 58.482 50.000 0.00 0.00 0.00 3.67
972 1390 1.668151 GCGCCGATGGATAGGTTCC 60.668 63.158 0.00 0.00 45.69 3.62
973 1391 0.946221 CAGCGCCGATGGATAGGTTC 60.946 60.000 2.29 0.00 0.00 3.62
975 1393 2.134287 ACAGCGCCGATGGATAGGT 61.134 57.895 7.47 0.00 0.00 3.08
1023 1446 1.212751 CTCGCTGACCGACATGTGA 59.787 57.895 1.15 0.00 41.89 3.58
1111 1540 2.105766 GATGTCCCGGTAAGTGGTACT 58.894 52.381 0.00 0.00 32.80 2.73
1114 1543 0.545787 TGGATGTCCCGGTAAGTGGT 60.546 55.000 0.00 0.00 37.93 4.16
1116 1545 0.107848 GGTGGATGTCCCGGTAAGTG 60.108 60.000 0.00 0.00 37.93 3.16
1119 1548 3.730158 GGGTGGATGTCCCGGTAA 58.270 61.111 0.00 0.00 37.93 2.85
1167 1596 4.394712 CTGGCCACGTCCCAGGAC 62.395 72.222 19.47 6.77 44.87 3.85
1200 1629 2.018544 CTGCTCGTCGGAGTAGGAG 58.981 63.158 1.82 0.00 45.88 3.69
1603 2050 0.543749 ATCTTGCTGAGGTAGGTGGC 59.456 55.000 0.00 0.00 0.00 5.01
1632 2079 7.419711 AACGAGAAGGAATCATTTAGGAGTA 57.580 36.000 0.00 0.00 0.00 2.59
1633 2080 5.941555 ACGAGAAGGAATCATTTAGGAGT 57.058 39.130 0.00 0.00 0.00 3.85
1634 2081 5.460419 CGAACGAGAAGGAATCATTTAGGAG 59.540 44.000 0.00 0.00 0.00 3.69
1635 2082 5.126545 TCGAACGAGAAGGAATCATTTAGGA 59.873 40.000 0.00 0.00 0.00 2.94
1636 2083 5.348986 TCGAACGAGAAGGAATCATTTAGG 58.651 41.667 0.00 0.00 0.00 2.69
1637 2084 6.144724 GGATCGAACGAGAAGGAATCATTTAG 59.855 42.308 2.94 0.00 0.00 1.85
1639 2086 4.811557 GGATCGAACGAGAAGGAATCATTT 59.188 41.667 2.94 0.00 0.00 2.32
1641 2088 3.243907 GGGATCGAACGAGAAGGAATCAT 60.244 47.826 2.94 0.00 0.00 2.45
1683 2155 6.660949 CCAACCAGGAATTCTTCATCTTACTT 59.339 38.462 5.23 0.00 41.22 2.24
1685 2157 5.946377 ACCAACCAGGAATTCTTCATCTTAC 59.054 40.000 5.23 0.00 41.22 2.34
1686 2158 6.139679 ACCAACCAGGAATTCTTCATCTTA 57.860 37.500 5.23 0.00 41.22 2.10
1688 2160 4.664688 ACCAACCAGGAATTCTTCATCT 57.335 40.909 5.23 0.00 41.22 2.90
1689 2161 5.473039 CAAACCAACCAGGAATTCTTCATC 58.527 41.667 5.23 0.00 41.22 2.92
1691 2163 3.640967 CCAAACCAACCAGGAATTCTTCA 59.359 43.478 5.23 0.00 41.22 3.02
1695 2167 2.037121 CACCCAAACCAACCAGGAATTC 59.963 50.000 0.00 0.00 41.22 2.17
1698 2171 0.336737 ACACCCAAACCAACCAGGAA 59.663 50.000 0.00 0.00 41.22 3.36
1700 2173 0.463620 CAACACCCAAACCAACCAGG 59.536 55.000 0.00 0.00 45.67 4.45
1715 2188 0.035881 CTCCAGCTTCCTCTGCAACA 59.964 55.000 0.00 0.00 32.87 3.33
2018 2494 8.008332 TCCCTGGATTCAGTAATACATACAGTA 58.992 37.037 0.00 0.00 35.33 2.74
2019 2495 6.844388 TCCCTGGATTCAGTAATACATACAGT 59.156 38.462 0.00 0.00 35.33 3.55
2020 2496 7.303182 TCCCTGGATTCAGTAATACATACAG 57.697 40.000 0.00 0.00 35.33 2.74
2021 2497 7.292356 ACATCCCTGGATTCAGTAATACATACA 59.708 37.037 0.00 0.00 35.33 2.29
2022 2498 7.680730 ACATCCCTGGATTCAGTAATACATAC 58.319 38.462 0.00 0.00 35.33 2.39
2024 2500 6.770286 ACATCCCTGGATTCAGTAATACAT 57.230 37.500 0.00 0.00 35.33 2.29
2025 2501 7.347222 AGTTACATCCCTGGATTCAGTAATACA 59.653 37.037 0.00 0.00 39.31 2.29
2026 2502 7.657761 CAGTTACATCCCTGGATTCAGTAATAC 59.342 40.741 0.00 2.08 39.31 1.89
2027 2503 7.347222 ACAGTTACATCCCTGGATTCAGTAATA 59.653 37.037 0.00 0.00 39.31 0.98
2028 2504 6.158695 ACAGTTACATCCCTGGATTCAGTAAT 59.841 38.462 0.00 0.00 39.31 1.89
2029 2505 5.487488 ACAGTTACATCCCTGGATTCAGTAA 59.513 40.000 0.00 0.31 39.31 2.24
2030 2506 5.030147 ACAGTTACATCCCTGGATTCAGTA 58.970 41.667 0.00 0.00 39.31 2.74
2031 2507 3.846588 ACAGTTACATCCCTGGATTCAGT 59.153 43.478 0.00 0.00 39.31 3.41
2032 2508 4.494091 ACAGTTACATCCCTGGATTCAG 57.506 45.455 0.00 0.00 40.59 3.02
2063 2539 1.895131 AGCCAGCAAATCCGATGTTTT 59.105 42.857 0.00 0.00 0.00 2.43
2068 2544 2.017049 GTACAAGCCAGCAAATCCGAT 58.983 47.619 0.00 0.00 0.00 4.18
2069 2545 1.003118 AGTACAAGCCAGCAAATCCGA 59.997 47.619 0.00 0.00 0.00 4.55
2070 2546 1.453155 AGTACAAGCCAGCAAATCCG 58.547 50.000 0.00 0.00 0.00 4.18
2071 2547 4.035675 GTCATAGTACAAGCCAGCAAATCC 59.964 45.833 0.00 0.00 0.00 3.01
2072 2548 4.878397 AGTCATAGTACAAGCCAGCAAATC 59.122 41.667 0.00 0.00 0.00 2.17
2117 2597 5.631992 GGAAGAAAAAGCCATCTTCTAACG 58.368 41.667 13.39 0.00 46.86 3.18
2118 2598 5.181433 ACGGAAGAAAAAGCCATCTTCTAAC 59.819 40.000 13.39 0.00 46.86 2.34
2119 2599 5.313712 ACGGAAGAAAAAGCCATCTTCTAA 58.686 37.500 13.39 0.00 46.86 2.10
2120 2600 4.906618 ACGGAAGAAAAAGCCATCTTCTA 58.093 39.130 13.39 0.00 46.86 2.10
2121 2601 3.756117 ACGGAAGAAAAAGCCATCTTCT 58.244 40.909 13.39 1.61 46.86 2.85
2122 2602 5.354234 TGATACGGAAGAAAAAGCCATCTTC 59.646 40.000 6.92 6.92 46.93 2.87
2123 2603 5.253330 TGATACGGAAGAAAAAGCCATCTT 58.747 37.500 0.00 0.00 38.56 2.40
2126 2606 6.332630 CAAATGATACGGAAGAAAAAGCCAT 58.667 36.000 0.00 0.00 0.00 4.40
2128 2608 5.102313 CCAAATGATACGGAAGAAAAAGCC 58.898 41.667 0.00 0.00 0.00 4.35
2130 2610 5.708948 TGCCAAATGATACGGAAGAAAAAG 58.291 37.500 0.00 0.00 0.00 2.27
2132 2612 5.417266 TCATGCCAAATGATACGGAAGAAAA 59.583 36.000 0.00 0.00 0.00 2.29
2165 2676 5.162794 TGAGGCAATCAATGAAAACATTCG 58.837 37.500 0.00 0.00 34.02 3.34
2301 2900 1.376037 GGCCTGCTAGTCACACCAC 60.376 63.158 0.00 0.00 0.00 4.16
2321 2920 3.306641 GCAGATCTCTGACCAAGTTGACT 60.307 47.826 11.34 0.00 46.59 3.41
2323 2922 2.027745 GGCAGATCTCTGACCAAGTTGA 60.028 50.000 11.34 0.00 46.23 3.18
2407 3011 1.032657 TCAGCGAGACCAGAGGCTAC 61.033 60.000 0.00 0.00 33.72 3.58
2410 3014 0.739112 CTTTCAGCGAGACCAGAGGC 60.739 60.000 0.00 0.00 0.00 4.70
2540 3153 2.160417 GCTTGAATATCCATAGCACGGC 59.840 50.000 0.00 0.00 0.00 5.68
2598 3211 6.044512 ACGCAGTGGAATACGAAAATATTC 57.955 37.500 0.00 0.00 42.51 1.75
2616 3229 1.884464 ATAGCACGGCATCACGCAG 60.884 57.895 0.00 0.00 45.17 5.18
2617 3230 2.173020 CATAGCACGGCATCACGCA 61.173 57.895 0.00 0.00 45.17 5.24
2618 3231 1.428370 TTCATAGCACGGCATCACGC 61.428 55.000 0.00 0.00 41.28 5.34
2619 3232 1.220529 ATTCATAGCACGGCATCACG 58.779 50.000 0.00 0.00 40.31 4.35
2620 3233 3.372206 GGATATTCATAGCACGGCATCAC 59.628 47.826 0.00 0.00 0.00 3.06
2621 3234 3.599343 GGATATTCATAGCACGGCATCA 58.401 45.455 0.00 0.00 0.00 3.07
2622 3235 2.939103 GGGATATTCATAGCACGGCATC 59.061 50.000 0.00 0.00 0.00 3.91
2623 3236 2.305635 TGGGATATTCATAGCACGGCAT 59.694 45.455 0.00 0.00 0.00 4.40
2624 3237 1.696884 TGGGATATTCATAGCACGGCA 59.303 47.619 0.00 0.00 0.00 5.69
2625 3238 2.076863 GTGGGATATTCATAGCACGGC 58.923 52.381 0.00 0.00 0.00 5.68
2626 3239 3.329386 CAGTGGGATATTCATAGCACGG 58.671 50.000 0.00 0.00 0.00 4.94
2627 3240 2.738846 GCAGTGGGATATTCATAGCACG 59.261 50.000 0.00 0.00 0.00 5.34
2628 3241 2.738846 CGCAGTGGGATATTCATAGCAC 59.261 50.000 0.00 0.00 0.00 4.40
2629 3242 2.368548 ACGCAGTGGGATATTCATAGCA 59.631 45.455 14.98 0.00 42.51 3.49
2630 3243 3.045601 ACGCAGTGGGATATTCATAGC 57.954 47.619 14.98 0.00 42.51 2.97
2645 3258 1.884464 ATAGCACGGCATCACGCAG 60.884 57.895 0.00 0.00 45.17 5.18
2646 3259 2.173020 CATAGCACGGCATCACGCA 61.173 57.895 0.00 0.00 45.17 5.24
2647 3260 2.628106 CATAGCACGGCATCACGC 59.372 61.111 0.00 0.00 41.28 5.34
2648 3261 0.601046 ATCCATAGCACGGCATCACG 60.601 55.000 0.00 0.00 40.31 4.35
2649 3262 2.455674 TATCCATAGCACGGCATCAC 57.544 50.000 0.00 0.00 0.00 3.06
2650 3263 3.701205 AATATCCATAGCACGGCATCA 57.299 42.857 0.00 0.00 0.00 3.07
2651 3264 6.683974 AAATAATATCCATAGCACGGCATC 57.316 37.500 0.00 0.00 0.00 3.91
2652 3265 6.095440 GGAAAATAATATCCATAGCACGGCAT 59.905 38.462 0.00 0.00 35.71 4.40
2653 3266 5.414454 GGAAAATAATATCCATAGCACGGCA 59.586 40.000 0.00 0.00 35.71 5.69
2654 3267 5.414454 TGGAAAATAATATCCATAGCACGGC 59.586 40.000 0.00 0.00 40.74 5.68
2655 3268 7.174946 ACTTGGAAAATAATATCCATAGCACGG 59.825 37.037 0.00 0.00 44.83 4.94
2656 3269 8.099364 ACTTGGAAAATAATATCCATAGCACG 57.901 34.615 0.00 0.00 44.83 5.34
2765 3378 9.547753 GCTGTAATTCAGTTCATTCTATTCCTA 57.452 33.333 6.72 0.00 45.23 2.94
2766 3379 7.500559 GGCTGTAATTCAGTTCATTCTATTCCT 59.499 37.037 6.72 0.00 45.23 3.36
2767 3380 7.283127 TGGCTGTAATTCAGTTCATTCTATTCC 59.717 37.037 6.72 0.00 45.23 3.01
2768 3381 8.213518 TGGCTGTAATTCAGTTCATTCTATTC 57.786 34.615 6.72 0.00 45.23 1.75
2769 3382 8.757982 ATGGCTGTAATTCAGTTCATTCTATT 57.242 30.769 6.72 0.00 45.23 1.73
2770 3383 8.757982 AATGGCTGTAATTCAGTTCATTCTAT 57.242 30.769 14.59 0.00 45.23 1.98
2771 3384 8.213518 GAATGGCTGTAATTCAGTTCATTCTA 57.786 34.615 24.15 7.17 46.79 2.10
2772 3385 7.093322 GAATGGCTGTAATTCAGTTCATTCT 57.907 36.000 24.15 12.03 46.79 2.40
2774 3387 6.626623 GCAGAATGGCTGTAATTCAGTTCATT 60.627 38.462 17.24 17.24 46.62 2.57
2775 3388 5.163581 GCAGAATGGCTGTAATTCAGTTCAT 60.164 40.000 0.00 7.73 46.62 2.57
2776 3389 4.156556 GCAGAATGGCTGTAATTCAGTTCA 59.843 41.667 0.00 6.31 46.62 3.18
2777 3390 4.397417 AGCAGAATGGCTGTAATTCAGTTC 59.603 41.667 0.00 4.02 46.62 3.01
2778 3391 4.338879 AGCAGAATGGCTGTAATTCAGTT 58.661 39.130 0.00 0.00 46.62 3.16
2779 3392 3.960571 AGCAGAATGGCTGTAATTCAGT 58.039 40.909 0.00 0.00 46.62 3.41
2780 3393 6.441093 TTTAGCAGAATGGCTGTAATTCAG 57.559 37.500 0.00 0.00 46.62 3.02
2781 3394 7.340232 AGAATTTAGCAGAATGGCTGTAATTCA 59.660 33.333 23.66 0.00 45.87 2.57
2782 3395 7.710896 AGAATTTAGCAGAATGGCTGTAATTC 58.289 34.615 19.04 19.04 46.62 2.17
2783 3396 7.651027 AGAATTTAGCAGAATGGCTGTAATT 57.349 32.000 0.00 0.00 46.62 1.40
2784 3397 7.651027 AAGAATTTAGCAGAATGGCTGTAAT 57.349 32.000 0.00 0.00 46.62 1.89
2785 3398 7.466746 AAAGAATTTAGCAGAATGGCTGTAA 57.533 32.000 0.00 0.00 45.44 2.41
2786 3399 8.752005 ATAAAGAATTTAGCAGAATGGCTGTA 57.248 30.769 0.00 0.00 44.82 2.74
2787 3400 5.990120 AAAGAATTTAGCAGAATGGCTGT 57.010 34.783 0.00 0.00 45.44 4.40
2788 3401 8.192774 TCAATAAAGAATTTAGCAGAATGGCTG 58.807 33.333 0.00 0.00 44.82 4.85
2789 3402 8.297470 TCAATAAAGAATTTAGCAGAATGGCT 57.703 30.769 0.00 0.00 44.82 4.75
2790 3403 8.931385 TTCAATAAAGAATTTAGCAGAATGGC 57.069 30.769 0.00 0.00 44.82 4.40
2820 3433 5.479027 AGGTAGTAATTTCACGGGCATTTTT 59.521 36.000 0.00 0.00 0.00 1.94
2821 3434 5.014202 AGGTAGTAATTTCACGGGCATTTT 58.986 37.500 0.00 0.00 0.00 1.82
2822 3435 4.595986 AGGTAGTAATTTCACGGGCATTT 58.404 39.130 0.00 0.00 0.00 2.32
2823 3436 4.196971 GAGGTAGTAATTTCACGGGCATT 58.803 43.478 0.00 0.00 0.00 3.56
2824 3437 3.433173 GGAGGTAGTAATTTCACGGGCAT 60.433 47.826 0.00 0.00 0.00 4.40
2825 3438 2.093341 GGAGGTAGTAATTTCACGGGCA 60.093 50.000 0.00 0.00 0.00 5.36
2826 3439 2.093341 TGGAGGTAGTAATTTCACGGGC 60.093 50.000 0.00 0.00 0.00 6.13
2827 3440 3.899052 TGGAGGTAGTAATTTCACGGG 57.101 47.619 0.00 0.00 0.00 5.28
2828 3441 5.163447 TGAGATGGAGGTAGTAATTTCACGG 60.163 44.000 0.00 0.00 0.00 4.94
2829 3442 5.902681 TGAGATGGAGGTAGTAATTTCACG 58.097 41.667 0.00 0.00 0.00 4.35
2830 3443 8.561738 TTTTGAGATGGAGGTAGTAATTTCAC 57.438 34.615 0.00 0.00 0.00 3.18
2838 3451 9.213777 TGTCTTATATTTTGAGATGGAGGTAGT 57.786 33.333 0.00 0.00 0.00 2.73
2839 3452 9.482627 GTGTCTTATATTTTGAGATGGAGGTAG 57.517 37.037 0.00 0.00 0.00 3.18
2840 3453 9.213777 AGTGTCTTATATTTTGAGATGGAGGTA 57.786 33.333 0.00 0.00 0.00 3.08
2841 3454 8.095452 AGTGTCTTATATTTTGAGATGGAGGT 57.905 34.615 0.00 0.00 0.00 3.85
2842 3455 8.834465 CAAGTGTCTTATATTTTGAGATGGAGG 58.166 37.037 0.00 0.00 0.00 4.30
2843 3456 9.388506 ACAAGTGTCTTATATTTTGAGATGGAG 57.611 33.333 0.00 0.00 0.00 3.86
2844 3457 9.166173 CACAAGTGTCTTATATTTTGAGATGGA 57.834 33.333 0.00 0.00 0.00 3.41
2845 3458 8.400947 CCACAAGTGTCTTATATTTTGAGATGG 58.599 37.037 0.00 0.00 0.00 3.51
2846 3459 9.166173 TCCACAAGTGTCTTATATTTTGAGATG 57.834 33.333 0.00 0.00 0.00 2.90
2847 3460 9.167311 GTCCACAAGTGTCTTATATTTTGAGAT 57.833 33.333 0.00 0.00 0.00 2.75
2848 3461 8.375506 AGTCCACAAGTGTCTTATATTTTGAGA 58.624 33.333 0.00 0.00 0.00 3.27
2849 3462 8.553459 AGTCCACAAGTGTCTTATATTTTGAG 57.447 34.615 0.00 0.00 0.00 3.02
2850 3463 9.653287 CTAGTCCACAAGTGTCTTATATTTTGA 57.347 33.333 0.00 0.00 0.00 2.69
2851 3464 9.436957 ACTAGTCCACAAGTGTCTTATATTTTG 57.563 33.333 0.00 0.00 0.00 2.44
2880 3493 9.672673 CAGGGAATACTCGGAATGAATTTATAT 57.327 33.333 0.00 0.00 0.00 0.86
2881 3494 7.606456 GCAGGGAATACTCGGAATGAATTTATA 59.394 37.037 0.00 0.00 0.00 0.98
2882 3495 6.431234 GCAGGGAATACTCGGAATGAATTTAT 59.569 38.462 0.00 0.00 0.00 1.40
2883 3496 5.763204 GCAGGGAATACTCGGAATGAATTTA 59.237 40.000 0.00 0.00 0.00 1.40
2884 3497 4.580580 GCAGGGAATACTCGGAATGAATTT 59.419 41.667 0.00 0.00 0.00 1.82
2885 3498 4.137543 GCAGGGAATACTCGGAATGAATT 58.862 43.478 0.00 0.00 0.00 2.17
2886 3499 3.392616 AGCAGGGAATACTCGGAATGAAT 59.607 43.478 0.00 0.00 0.00 2.57
2887 3500 2.771943 AGCAGGGAATACTCGGAATGAA 59.228 45.455 0.00 0.00 0.00 2.57
2888 3501 2.103094 CAGCAGGGAATACTCGGAATGA 59.897 50.000 0.00 0.00 0.00 2.57
2889 3502 2.487934 CAGCAGGGAATACTCGGAATG 58.512 52.381 0.00 0.00 0.00 2.67
2890 3503 1.417890 CCAGCAGGGAATACTCGGAAT 59.582 52.381 0.00 0.00 40.01 3.01
2891 3504 0.830648 CCAGCAGGGAATACTCGGAA 59.169 55.000 0.00 0.00 40.01 4.30
2892 3505 0.325296 ACCAGCAGGGAATACTCGGA 60.325 55.000 0.00 0.00 41.15 4.55
2893 3506 0.541863 AACCAGCAGGGAATACTCGG 59.458 55.000 0.00 0.00 41.15 4.63
2894 3507 2.403252 AAACCAGCAGGGAATACTCG 57.597 50.000 0.00 0.00 41.15 4.18
2895 3508 3.686016 TCAAAACCAGCAGGGAATACTC 58.314 45.455 0.00 0.00 41.15 2.59
2896 3509 3.806949 TCAAAACCAGCAGGGAATACT 57.193 42.857 0.00 0.00 41.15 2.12
2897 3510 3.763897 ACATCAAAACCAGCAGGGAATAC 59.236 43.478 0.00 0.00 41.15 1.89
2898 3511 4.046286 ACATCAAAACCAGCAGGGAATA 57.954 40.909 0.00 0.00 41.15 1.75
2899 3512 2.893424 ACATCAAAACCAGCAGGGAAT 58.107 42.857 0.00 0.00 41.15 3.01
2900 3513 2.380064 ACATCAAAACCAGCAGGGAA 57.620 45.000 0.00 0.00 41.15 3.97
2901 3514 2.380064 AACATCAAAACCAGCAGGGA 57.620 45.000 0.00 0.00 41.15 4.20
2902 3515 4.806640 ATAAACATCAAAACCAGCAGGG 57.193 40.909 0.00 0.00 44.81 4.45
2903 3516 6.266168 TGTATAAACATCAAAACCAGCAGG 57.734 37.500 0.00 0.00 42.21 4.85
2904 3517 8.761575 ATTTGTATAAACATCAAAACCAGCAG 57.238 30.769 0.00 0.00 34.97 4.24
2905 3518 9.553064 AAATTTGTATAAACATCAAAACCAGCA 57.447 25.926 0.00 0.00 34.97 4.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.