Multiple sequence alignment - TraesCS7B01G340700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G340700 chr7B 100.000 2382 0 0 1 2382 595306353 595308734 0.000000e+00 4399.0
1 TraesCS7B01G340700 chr7B 87.321 1538 112 42 784 2255 595007235 595008755 0.000000e+00 1683.0
2 TraesCS7B01G340700 chr7B 86.650 1588 131 33 784 2318 595080353 595081912 0.000000e+00 1683.0
3 TraesCS7B01G340700 chr7B 88.175 871 67 25 1484 2323 595172825 595173690 0.000000e+00 1005.0
4 TraesCS7B01G340700 chr7B 100.000 288 0 0 2727 3014 595309079 595309366 1.590000e-147 532.0
5 TraesCS7B01G340700 chr7B 86.456 443 38 13 792 1222 595166345 595166777 1.640000e-127 466.0
6 TraesCS7B01G340700 chr7B 79.608 613 51 32 1 563 595006640 595007228 3.670000e-99 372.0
7 TraesCS7B01G340700 chr7B 97.368 190 5 0 1301 1490 595166773 595166962 1.040000e-84 324.0
8 TraesCS7B01G340700 chr7B 95.000 200 8 2 352 551 595166146 595166343 2.260000e-81 313.0
9 TraesCS7B01G340700 chr7B 90.278 216 7 6 356 563 595080137 595080346 1.380000e-68 270.0
10 TraesCS7B01G340700 chr7B 86.667 195 15 8 1 188 595079706 595079896 3.940000e-49 206.0
11 TraesCS7B01G340700 chr7A 93.371 1418 51 13 778 2172 636628846 636630243 0.000000e+00 2058.0
12 TraesCS7B01G340700 chr7A 88.707 1346 87 29 814 2118 636126711 636128032 0.000000e+00 1583.0
13 TraesCS7B01G340700 chr7A 87.038 1381 110 25 792 2117 635860145 635861511 0.000000e+00 1495.0
14 TraesCS7B01G340700 chr7A 90.503 358 17 8 10 355 636628249 636628601 9.850000e-125 457.0
15 TraesCS7B01G340700 chr7A 94.196 224 10 2 352 573 636628633 636628855 3.720000e-89 339.0
16 TraesCS7B01G340700 chr7A 85.057 261 20 9 2122 2382 636206942 636207183 6.450000e-62 248.0
17 TraesCS7B01G340700 chr7A 85.156 256 19 5 2122 2377 636145070 636145306 8.350000e-61 244.0
18 TraesCS7B01G340700 chr7A 85.897 234 20 7 2157 2382 636630258 636630486 1.400000e-58 237.0
19 TraesCS7B01G340700 chr7A 77.043 514 46 35 15 489 636126172 636126652 2.340000e-56 230.0
20 TraesCS7B01G340700 chr7A 87.912 182 16 6 2131 2308 636141486 636141665 3.040000e-50 209.0
21 TraesCS7B01G340700 chr7A 92.414 145 10 1 352 496 635859965 635860108 3.940000e-49 206.0
22 TraesCS7B01G340700 chr7A 94.495 109 6 0 2905 3013 625741273 625741165 5.170000e-38 169.0
23 TraesCS7B01G340700 chr7D 92.740 1281 61 12 912 2172 550800374 550801642 0.000000e+00 1821.0
24 TraesCS7B01G340700 chr7D 88.808 1367 98 28 784 2114 550462779 550464126 0.000000e+00 1626.0
25 TraesCS7B01G340700 chr7D 86.364 1342 104 38 784 2090 550552867 550554164 0.000000e+00 1391.0
26 TraesCS7B01G340700 chr7D 83.951 891 100 30 1456 2320 550655443 550656316 0.000000e+00 813.0
27 TraesCS7B01G340700 chr7D 88.818 626 52 8 784 1404 550643045 550643657 0.000000e+00 752.0
28 TraesCS7B01G340700 chr7D 94.495 436 20 4 136 569 550799861 550800294 0.000000e+00 669.0
29 TraesCS7B01G340700 chr7D 89.744 234 10 7 2154 2382 550801657 550801881 1.370000e-73 287.0
30 TraesCS7B01G340700 chr7D 93.103 145 9 1 352 496 550462594 550462737 8.470000e-51 211.0
31 TraesCS7B01G340700 chr7D 93.103 145 9 1 352 496 550642860 550643003 8.470000e-51 211.0
32 TraesCS7B01G340700 chr7D 82.990 194 28 5 2130 2322 550464279 550464468 1.440000e-38 171.0
33 TraesCS7B01G340700 chr7D 95.789 95 3 1 1 95 550799777 550799870 5.200000e-33 152.0
34 TraesCS7B01G340700 chr7D 97.500 80 2 0 786 865 550800296 550800375 1.460000e-28 137.0
35 TraesCS7B01G340700 chr7D 100.000 35 0 0 520 554 550462741 550462775 6.970000e-07 65.8
36 TraesCS7B01G340700 chr2B 90.047 211 15 2 573 777 776646247 776646037 4.950000e-68 268.0
37 TraesCS7B01G340700 chr2B 89.100 211 16 3 572 776 161143286 161143495 3.860000e-64 255.0
38 TraesCS7B01G340700 chr2B 95.327 107 5 0 2908 3014 714072477 714072583 1.440000e-38 171.0
39 TraesCS7B01G340700 chr5D 89.202 213 17 2 573 779 213954918 213954706 8.290000e-66 261.0
40 TraesCS7B01G340700 chrUn 89.151 212 16 3 572 777 98338753 98338543 1.070000e-64 257.0
41 TraesCS7B01G340700 chr4D 89.474 209 15 3 573 775 482157231 482157438 1.070000e-64 257.0
42 TraesCS7B01G340700 chr5B 89.320 206 14 4 578 777 212194115 212193912 4.990000e-63 252.0
43 TraesCS7B01G340700 chr5B 88.626 211 17 3 573 777 64415911 64416120 1.790000e-62 250.0
44 TraesCS7B01G340700 chr6B 88.208 212 19 2 572 777 684532111 684531900 6.450000e-62 248.0
45 TraesCS7B01G340700 chr6B 93.750 112 7 0 2903 3014 88351894 88352005 5.170000e-38 169.0
46 TraesCS7B01G340700 chr2A 87.736 212 21 1 573 779 27429673 27429884 3.000000e-60 243.0
47 TraesCS7B01G340700 chr3B 99.083 109 1 0 2906 3014 83456434 83456542 2.370000e-46 196.0
48 TraesCS7B01G340700 chr3B 97.222 108 3 0 2907 3014 18239082 18238975 1.850000e-42 183.0
49 TraesCS7B01G340700 chr3B 92.308 117 8 1 2898 3014 708943255 708943140 6.680000e-37 165.0
50 TraesCS7B01G340700 chr3B 84.466 103 6 6 449 551 731096181 731096089 3.200000e-15 93.5
51 TraesCS7B01G340700 chr5A 95.455 110 5 0 2905 3014 470042707 470042816 3.090000e-40 176.0
52 TraesCS7B01G340700 chr4B 94.643 112 6 0 2903 3014 641425137 641425026 1.110000e-39 174.0
53 TraesCS7B01G340700 chr3D 93.750 112 7 0 2903 3014 536428804 536428693 5.170000e-38 169.0
54 TraesCS7B01G340700 chr3D 85.437 103 5 6 449 551 551346681 551346589 6.880000e-17 99.0
55 TraesCS7B01G340700 chr3D 85.437 103 5 6 449 551 551429979 551430071 6.880000e-17 99.0
56 TraesCS7B01G340700 chr3D 90.909 77 0 5 244 313 551429746 551429822 2.470000e-16 97.1
57 TraesCS7B01G340700 chr4A 81.746 126 4 11 226 337 595442169 595442289 1.490000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G340700 chr7B 595306353 595309366 3013 False 2465.500000 4399 100.000000 1 3014 2 chr7B.!!$F5 3013
1 TraesCS7B01G340700 chr7B 595006640 595008755 2115 False 1027.500000 1683 83.464500 1 2255 2 chr7B.!!$F2 2254
2 TraesCS7B01G340700 chr7B 595172825 595173690 865 False 1005.000000 1005 88.175000 1484 2323 1 chr7B.!!$F1 839
3 TraesCS7B01G340700 chr7B 595079706 595081912 2206 False 719.666667 1683 87.865000 1 2318 3 chr7B.!!$F3 2317
4 TraesCS7B01G340700 chr7B 595166146 595166962 816 False 367.666667 466 92.941333 352 1490 3 chr7B.!!$F4 1138
5 TraesCS7B01G340700 chr7A 636126172 636128032 1860 False 906.500000 1583 82.875000 15 2118 2 chr7A.!!$F3 2103
6 TraesCS7B01G340700 chr7A 635859965 635861511 1546 False 850.500000 1495 89.726000 352 2117 2 chr7A.!!$F2 1765
7 TraesCS7B01G340700 chr7A 636628249 636630486 2237 False 772.750000 2058 90.991750 10 2382 4 chr7A.!!$F5 2372
8 TraesCS7B01G340700 chr7A 636141486 636145306 3820 False 226.500000 244 86.534000 2122 2377 2 chr7A.!!$F4 255
9 TraesCS7B01G340700 chr7D 550552867 550554164 1297 False 1391.000000 1391 86.364000 784 2090 1 chr7D.!!$F1 1306
10 TraesCS7B01G340700 chr7D 550655443 550656316 873 False 813.000000 813 83.951000 1456 2320 1 chr7D.!!$F2 864
11 TraesCS7B01G340700 chr7D 550799777 550801881 2104 False 613.200000 1821 94.053600 1 2382 5 chr7D.!!$F5 2381
12 TraesCS7B01G340700 chr7D 550462594 550464468 1874 False 518.450000 1626 91.225250 352 2322 4 chr7D.!!$F3 1970
13 TraesCS7B01G340700 chr7D 550642860 550643657 797 False 481.500000 752 90.960500 352 1404 2 chr7D.!!$F4 1052

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
596 778 0.037447 AGACTTGCCTGCTCCCTTTC 59.963 55.0 0.0 0.0 0.0 2.62 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2328 3953 0.320374 TTCCACCGTGCTCACCTAAG 59.68 55.0 0.0 0.0 0.0 2.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
74 77 6.072008 TCAGGTAGCACATTAAAGTACGTACA 60.072 38.462 26.55 7.21 0.00 2.90
128 132 2.027688 GCATGAGAGCGTTGTACGTAAC 59.972 50.000 0.00 0.00 44.73 2.50
133 137 2.387624 CGTTGTACGTAACGCGCC 59.612 61.111 5.73 0.00 45.49 6.53
134 138 2.363555 CGTTGTACGTAACGCGCCA 61.364 57.895 5.73 0.00 45.49 5.69
156 209 1.973138 CGCATGCAGTTTCCTTCTTG 58.027 50.000 19.57 0.00 0.00 3.02
162 215 1.160137 CAGTTTCCTTCTTGCCCGAG 58.840 55.000 0.00 0.00 0.00 4.63
170 223 2.282462 CTTGCCCGAGTTGCCCTT 60.282 61.111 0.00 0.00 0.00 3.95
212 301 4.553330 TCCTGATCTTTACCAAGTCCAC 57.447 45.455 0.00 0.00 0.00 4.02
220 314 1.348064 TACCAAGTCCACAGACCAGG 58.652 55.000 0.00 0.00 44.72 4.45
237 331 2.399448 CAGGGCGCGTAATTTGTTTTT 58.601 42.857 8.43 0.00 0.00 1.94
238 332 2.154772 CAGGGCGCGTAATTTGTTTTTG 59.845 45.455 8.43 0.00 0.00 2.44
240 334 1.459464 GGCGCGTAATTTGTTTTTGCG 60.459 47.619 8.43 0.00 40.55 4.85
251 365 4.653806 TTGTTTTTGCGTTGTTTCCTTG 57.346 36.364 0.00 0.00 0.00 3.61
335 466 7.975866 ACATATACCACTAACTTAAACGACG 57.024 36.000 0.00 0.00 0.00 5.12
480 655 6.094061 CGGACGCCATAAATAAAAGGAAAAA 58.906 36.000 0.00 0.00 0.00 1.94
586 768 3.746957 GGGGGATGAGACTTGCCT 58.253 61.111 0.00 0.00 0.00 4.75
587 769 1.225704 GGGGGATGAGACTTGCCTG 59.774 63.158 0.00 0.00 0.00 4.85
589 771 1.606531 GGGATGAGACTTGCCTGCT 59.393 57.895 0.00 0.00 0.00 4.24
594 776 1.130054 TGAGACTTGCCTGCTCCCTT 61.130 55.000 0.00 0.00 0.00 3.95
596 778 0.037447 AGACTTGCCTGCTCCCTTTC 59.963 55.000 0.00 0.00 0.00 2.62
597 779 0.037447 GACTTGCCTGCTCCCTTTCT 59.963 55.000 0.00 0.00 0.00 2.52
598 780 1.279271 GACTTGCCTGCTCCCTTTCTA 59.721 52.381 0.00 0.00 0.00 2.10
599 781 1.918957 ACTTGCCTGCTCCCTTTCTAT 59.081 47.619 0.00 0.00 0.00 1.98
600 782 2.295885 CTTGCCTGCTCCCTTTCTATG 58.704 52.381 0.00 0.00 0.00 2.23
601 783 0.107017 TGCCTGCTCCCTTTCTATGC 60.107 55.000 0.00 0.00 0.00 3.14
602 784 0.182299 GCCTGCTCCCTTTCTATGCT 59.818 55.000 0.00 0.00 0.00 3.79
603 785 1.813477 GCCTGCTCCCTTTCTATGCTC 60.813 57.143 0.00 0.00 0.00 4.26
604 786 1.202746 CCTGCTCCCTTTCTATGCTCC 60.203 57.143 0.00 0.00 0.00 4.70
605 787 0.839946 TGCTCCCTTTCTATGCTCCC 59.160 55.000 0.00 0.00 0.00 4.30
607 789 1.423161 GCTCCCTTTCTATGCTCCCAT 59.577 52.381 0.00 0.00 35.44 4.00
608 790 2.551938 GCTCCCTTTCTATGCTCCCATC 60.552 54.545 0.00 0.00 32.85 3.51
609 791 2.039613 CTCCCTTTCTATGCTCCCATCC 59.960 54.545 0.00 0.00 32.85 3.51
610 792 1.271054 CCCTTTCTATGCTCCCATCCG 60.271 57.143 0.00 0.00 32.85 4.18
611 793 1.417890 CCTTTCTATGCTCCCATCCGT 59.582 52.381 0.00 0.00 32.85 4.69
612 794 2.487934 CTTTCTATGCTCCCATCCGTG 58.512 52.381 0.00 0.00 32.85 4.94
613 795 0.106708 TTCTATGCTCCCATCCGTGC 59.893 55.000 0.00 0.00 32.85 5.34
614 796 0.760567 TCTATGCTCCCATCCGTGCT 60.761 55.000 0.00 0.00 32.85 4.40
615 797 0.107456 CTATGCTCCCATCCGTGCTT 59.893 55.000 0.00 0.00 32.85 3.91
616 798 0.106708 TATGCTCCCATCCGTGCTTC 59.893 55.000 0.00 0.00 32.85 3.86
618 800 2.202932 CTCCCATCCGTGCTTCCG 60.203 66.667 0.00 0.00 0.00 4.30
619 801 4.467084 TCCCATCCGTGCTTCCGC 62.467 66.667 0.00 0.00 0.00 5.54
623 805 2.202703 ATCCGTGCTTCCGCGTAC 60.203 61.111 4.92 0.00 43.11 3.67
624 806 4.764336 TCCGTGCTTCCGCGTACG 62.764 66.667 11.84 11.84 43.11 3.67
626 808 3.823421 CGTGCTTCCGCGTACGTG 61.823 66.667 21.58 21.58 39.95 4.49
627 809 3.475774 GTGCTTCCGCGTACGTGG 61.476 66.667 36.25 36.25 46.45 4.94
632 814 3.210223 TTCCGCGTACGTGGCTTGA 62.210 57.895 36.93 21.05 44.84 3.02
633 815 2.495366 TTCCGCGTACGTGGCTTGAT 62.495 55.000 36.93 0.00 44.84 2.57
635 817 1.632046 CCGCGTACGTGGCTTGATTT 61.632 55.000 32.68 0.00 39.06 2.17
636 818 0.518355 CGCGTACGTGGCTTGATTTG 60.518 55.000 20.84 0.00 33.53 2.32
638 820 1.195900 GCGTACGTGGCTTGATTTGAA 59.804 47.619 17.90 0.00 0.00 2.69
639 821 2.159572 GCGTACGTGGCTTGATTTGAAT 60.160 45.455 17.90 0.00 0.00 2.57
641 823 3.727673 CGTACGTGGCTTGATTTGAATGG 60.728 47.826 7.22 0.00 0.00 3.16
643 825 3.091545 ACGTGGCTTGATTTGAATGGAT 58.908 40.909 0.00 0.00 0.00 3.41
644 826 4.269183 ACGTGGCTTGATTTGAATGGATA 58.731 39.130 0.00 0.00 0.00 2.59
645 827 4.704540 ACGTGGCTTGATTTGAATGGATAA 59.295 37.500 0.00 0.00 0.00 1.75
646 828 5.163622 ACGTGGCTTGATTTGAATGGATAAG 60.164 40.000 0.00 0.00 0.00 1.73
648 830 6.268566 GTGGCTTGATTTGAATGGATAAGAC 58.731 40.000 0.00 0.00 0.00 3.01
649 831 5.360714 TGGCTTGATTTGAATGGATAAGACC 59.639 40.000 0.00 0.00 0.00 3.85
650 832 5.221322 GGCTTGATTTGAATGGATAAGACCC 60.221 44.000 0.00 0.00 0.00 4.46
651 833 5.506317 GCTTGATTTGAATGGATAAGACCCG 60.506 44.000 0.00 0.00 0.00 5.28
652 834 4.460263 TGATTTGAATGGATAAGACCCGG 58.540 43.478 0.00 0.00 0.00 5.73
654 836 0.472471 TGAATGGATAAGACCCGGCC 59.528 55.000 0.00 0.00 0.00 6.13
655 837 0.250770 GAATGGATAAGACCCGGCCC 60.251 60.000 0.00 0.00 0.00 5.80
656 838 1.716028 AATGGATAAGACCCGGCCCC 61.716 60.000 0.00 0.00 0.00 5.80
658 840 2.509422 GATAAGACCCGGCCCCAC 59.491 66.667 0.00 0.00 0.00 4.61
659 841 3.094498 ATAAGACCCGGCCCCACC 61.094 66.667 0.00 0.00 0.00 4.61
669 851 2.449777 GCCCCACCCCCTGAAAAT 59.550 61.111 0.00 0.00 0.00 1.82
670 852 1.685765 GCCCCACCCCCTGAAAATC 60.686 63.158 0.00 0.00 0.00 2.17
671 853 1.780327 CCCCACCCCCTGAAAATCA 59.220 57.895 0.00 0.00 0.00 2.57
672 854 0.324645 CCCCACCCCCTGAAAATCAG 60.325 60.000 0.32 0.32 43.91 2.90
698 880 7.560796 GGGGGAGATGATTAGATTAGAAAGA 57.439 40.000 0.00 0.00 0.00 2.52
701 883 9.853177 GGGGAGATGATTAGATTAGAAAGAAAA 57.147 33.333 0.00 0.00 0.00 2.29
719 901 2.896745 AAAAGTGAAAAGGGCAGCTG 57.103 45.000 10.11 10.11 0.00 4.24
720 902 1.780503 AAAGTGAAAAGGGCAGCTGT 58.219 45.000 16.64 0.00 0.00 4.40
721 903 2.656947 AAGTGAAAAGGGCAGCTGTA 57.343 45.000 16.64 0.00 0.00 2.74
722 904 2.191128 AGTGAAAAGGGCAGCTGTAG 57.809 50.000 16.64 0.00 0.00 2.74
723 905 1.168714 GTGAAAAGGGCAGCTGTAGG 58.831 55.000 16.64 0.00 0.00 3.18
724 906 1.064003 TGAAAAGGGCAGCTGTAGGA 58.936 50.000 16.64 0.00 0.00 2.94
725 907 1.635487 TGAAAAGGGCAGCTGTAGGAT 59.365 47.619 16.64 0.00 0.00 3.24
726 908 2.019984 GAAAAGGGCAGCTGTAGGATG 58.980 52.381 16.64 0.00 0.00 3.51
727 909 1.289160 AAAGGGCAGCTGTAGGATGA 58.711 50.000 16.64 0.00 32.28 2.92
728 910 1.289160 AAGGGCAGCTGTAGGATGAA 58.711 50.000 16.64 0.00 32.28 2.57
729 911 0.835941 AGGGCAGCTGTAGGATGAAG 59.164 55.000 16.64 0.00 32.28 3.02
732 914 1.661341 GCAGCTGTAGGATGAAGTGG 58.339 55.000 16.64 0.00 32.28 4.00
733 915 1.745141 GCAGCTGTAGGATGAAGTGGG 60.745 57.143 16.64 0.00 32.28 4.61
734 916 1.833630 CAGCTGTAGGATGAAGTGGGA 59.166 52.381 5.25 0.00 32.28 4.37
735 917 2.114616 AGCTGTAGGATGAAGTGGGAG 58.885 52.381 0.00 0.00 0.00 4.30
736 918 1.474143 GCTGTAGGATGAAGTGGGAGC 60.474 57.143 0.00 0.00 0.00 4.70
737 919 1.833630 CTGTAGGATGAAGTGGGAGCA 59.166 52.381 0.00 0.00 0.00 4.26
739 921 0.824109 TAGGATGAAGTGGGAGCACG 59.176 55.000 0.00 0.00 0.00 5.34
740 922 1.450312 GGATGAAGTGGGAGCACGG 60.450 63.158 0.00 0.00 0.00 4.94
741 923 1.596934 GATGAAGTGGGAGCACGGA 59.403 57.895 0.00 0.00 0.00 4.69
742 924 0.179000 GATGAAGTGGGAGCACGGAT 59.821 55.000 0.00 0.00 0.00 4.18
744 926 1.450312 GAAGTGGGAGCACGGATGG 60.450 63.158 0.00 0.00 0.00 3.51
746 928 3.399181 GTGGGAGCACGGATGGGA 61.399 66.667 0.00 0.00 0.00 4.37
747 929 3.083349 TGGGAGCACGGATGGGAG 61.083 66.667 0.00 0.00 0.00 4.30
751 933 1.890979 GAGCACGGATGGGAGCATG 60.891 63.158 0.00 0.00 0.00 4.06
754 936 2.366837 ACGGATGGGAGCATGGGA 60.367 61.111 0.00 0.00 0.00 4.37
757 939 0.820891 CGGATGGGAGCATGGGAAAG 60.821 60.000 0.00 0.00 0.00 2.62
758 940 0.468771 GGATGGGAGCATGGGAAAGG 60.469 60.000 0.00 0.00 0.00 3.11
762 944 1.304282 GGAGCATGGGAAAGGAGCA 59.696 57.895 0.00 0.00 0.00 4.26
763 945 0.750911 GGAGCATGGGAAAGGAGCAG 60.751 60.000 0.00 0.00 0.00 4.24
764 946 0.750911 GAGCATGGGAAAGGAGCAGG 60.751 60.000 0.00 0.00 0.00 4.85
765 947 2.421399 GCATGGGAAAGGAGCAGGC 61.421 63.158 0.00 0.00 0.00 4.85
766 948 1.000521 CATGGGAAAGGAGCAGGCA 60.001 57.895 0.00 0.00 0.00 4.75
767 949 0.612732 CATGGGAAAGGAGCAGGCAA 60.613 55.000 0.00 0.00 0.00 4.52
768 950 0.324091 ATGGGAAAGGAGCAGGCAAG 60.324 55.000 0.00 0.00 0.00 4.01
769 951 2.346541 GGGAAAGGAGCAGGCAAGC 61.347 63.158 0.00 0.00 0.00 4.01
771 953 2.674380 AAAGGAGCAGGCAAGCCG 60.674 61.111 5.28 2.12 41.95 5.52
772 954 4.729918 AAGGAGCAGGCAAGCCGG 62.730 66.667 6.88 6.88 41.95 6.13
774 956 4.496336 GGAGCAGGCAAGCCGGAT 62.496 66.667 15.46 8.74 41.95 4.18
775 957 2.899339 GAGCAGGCAAGCCGGATC 60.899 66.667 15.46 14.32 39.23 3.36
776 958 4.496336 AGCAGGCAAGCCGGATCC 62.496 66.667 15.46 0.00 41.95 3.36
870 1072 1.354368 CCTCCTTTCTTTGCCACCCTA 59.646 52.381 0.00 0.00 0.00 3.53
877 1095 1.151677 TTTGCCACCCTACCTCCCT 60.152 57.895 0.00 0.00 0.00 4.20
878 1096 1.497309 TTTGCCACCCTACCTCCCTG 61.497 60.000 0.00 0.00 0.00 4.45
882 1100 4.798682 ACCCTACCTCCCTGCCCG 62.799 72.222 0.00 0.00 0.00 6.13
885 1103 3.155167 CTACCTCCCTGCCCGTCC 61.155 72.222 0.00 0.00 0.00 4.79
1122 1362 1.305219 GGCCTTGTTATGTCGCTGCA 61.305 55.000 0.00 0.00 0.00 4.41
1239 1491 2.033911 TTCTTGGCGATGGCTGCA 59.966 55.556 0.50 0.00 39.81 4.41
1290 1542 2.481276 CGACGGTGCTCAGGAAATGATA 60.481 50.000 0.00 0.00 37.28 2.15
1293 1545 3.055094 ACGGTGCTCAGGAAATGATAACT 60.055 43.478 0.00 0.00 37.28 2.24
1598 1898 0.248702 GACGAGGAGATTGAGCGGAC 60.249 60.000 0.00 0.00 0.00 4.79
1839 2160 4.157120 GGCACGCCGGTAGTGGAT 62.157 66.667 25.79 0.00 39.80 3.41
2247 3863 9.176181 GAAGAAAAACAATTCGTAGTATTGCAA 57.824 29.630 0.00 0.00 36.65 4.08
2339 3964 1.211969 GCGACGACTTAGGTGAGCA 59.788 57.895 0.00 0.00 0.00 4.26
2747 4374 2.932614 CAAGAAGGATACAGGAAGTGCG 59.067 50.000 0.00 0.00 41.41 5.34
2748 4375 1.134670 AGAAGGATACAGGAAGTGCGC 60.135 52.381 0.00 0.00 41.41 6.09
2749 4376 0.905357 AAGGATACAGGAAGTGCGCT 59.095 50.000 9.73 0.00 41.41 5.92
2750 4377 0.176680 AGGATACAGGAAGTGCGCTG 59.823 55.000 9.73 0.00 41.41 5.18
2751 4378 0.175760 GGATACAGGAAGTGCGCTGA 59.824 55.000 9.73 0.00 0.00 4.26
2752 4379 1.281899 GATACAGGAAGTGCGCTGAC 58.718 55.000 9.73 0.00 0.00 3.51
2753 4380 0.608130 ATACAGGAAGTGCGCTGACA 59.392 50.000 9.73 0.00 0.00 3.58
2754 4381 0.391228 TACAGGAAGTGCGCTGACAA 59.609 50.000 9.73 0.00 0.00 3.18
2755 4382 1.160329 ACAGGAAGTGCGCTGACAAC 61.160 55.000 9.73 0.00 0.00 3.32
2756 4383 1.956170 AGGAAGTGCGCTGACAACG 60.956 57.895 9.73 0.00 0.00 4.10
2763 4390 3.936653 CGCTGACAACGCTTCTGA 58.063 55.556 0.00 0.00 0.00 3.27
2764 4391 2.225348 CGCTGACAACGCTTCTGAA 58.775 52.632 0.00 0.00 0.00 3.02
2765 4392 0.581529 CGCTGACAACGCTTCTGAAA 59.418 50.000 0.00 0.00 0.00 2.69
2766 4393 1.003972 CGCTGACAACGCTTCTGAAAA 60.004 47.619 0.00 0.00 0.00 2.29
2767 4394 2.349817 CGCTGACAACGCTTCTGAAAAT 60.350 45.455 0.00 0.00 0.00 1.82
2768 4395 2.975851 GCTGACAACGCTTCTGAAAATG 59.024 45.455 0.00 0.00 0.00 2.32
2769 4396 3.558505 CTGACAACGCTTCTGAAAATGG 58.441 45.455 0.00 0.00 0.00 3.16
2770 4397 3.210227 TGACAACGCTTCTGAAAATGGA 58.790 40.909 0.00 0.00 0.00 3.41
2771 4398 3.820467 TGACAACGCTTCTGAAAATGGAT 59.180 39.130 0.00 0.00 0.00 3.41
2772 4399 4.161333 GACAACGCTTCTGAAAATGGATG 58.839 43.478 0.00 0.00 0.00 3.51
2773 4400 3.820467 ACAACGCTTCTGAAAATGGATGA 59.180 39.130 0.00 0.00 0.00 2.92
2774 4401 4.161333 CAACGCTTCTGAAAATGGATGAC 58.839 43.478 0.00 0.00 0.00 3.06
2775 4402 3.679389 ACGCTTCTGAAAATGGATGACT 58.321 40.909 0.00 0.00 0.00 3.41
2776 4403 4.832248 ACGCTTCTGAAAATGGATGACTA 58.168 39.130 0.00 0.00 0.00 2.59
2777 4404 4.872691 ACGCTTCTGAAAATGGATGACTAG 59.127 41.667 0.00 0.00 0.00 2.57
2778 4405 4.272018 CGCTTCTGAAAATGGATGACTAGG 59.728 45.833 0.00 0.00 0.00 3.02
2779 4406 4.036144 GCTTCTGAAAATGGATGACTAGGC 59.964 45.833 0.00 0.00 0.00 3.93
2780 4407 5.435291 CTTCTGAAAATGGATGACTAGGCT 58.565 41.667 0.00 0.00 0.00 4.58
2781 4408 5.441718 TCTGAAAATGGATGACTAGGCTT 57.558 39.130 0.00 0.00 0.00 4.35
2782 4409 6.560003 TCTGAAAATGGATGACTAGGCTTA 57.440 37.500 0.00 0.00 0.00 3.09
2783 4410 6.349300 TCTGAAAATGGATGACTAGGCTTAC 58.651 40.000 0.00 0.00 0.00 2.34
2784 4411 5.116180 TGAAAATGGATGACTAGGCTTACG 58.884 41.667 0.00 0.00 0.00 3.18
2785 4412 2.821991 ATGGATGACTAGGCTTACGC 57.178 50.000 0.00 0.00 0.00 4.42
2786 4413 1.776662 TGGATGACTAGGCTTACGCT 58.223 50.000 0.00 0.00 36.09 5.07
2787 4414 2.108168 TGGATGACTAGGCTTACGCTT 58.892 47.619 0.00 0.00 36.09 4.68
2788 4415 2.500098 TGGATGACTAGGCTTACGCTTT 59.500 45.455 0.00 0.00 36.09 3.51
2789 4416 3.702548 TGGATGACTAGGCTTACGCTTTA 59.297 43.478 0.00 0.00 36.09 1.85
2790 4417 4.202121 TGGATGACTAGGCTTACGCTTTAG 60.202 45.833 0.00 0.00 36.09 1.85
2791 4418 4.037684 GGATGACTAGGCTTACGCTTTAGA 59.962 45.833 0.00 0.00 36.09 2.10
2792 4419 4.634184 TGACTAGGCTTACGCTTTAGAG 57.366 45.455 0.00 0.00 36.09 2.43
2793 4420 4.267536 TGACTAGGCTTACGCTTTAGAGA 58.732 43.478 0.00 0.00 36.09 3.10
2794 4421 4.888239 TGACTAGGCTTACGCTTTAGAGAT 59.112 41.667 0.00 0.00 36.09 2.75
2795 4422 5.008811 TGACTAGGCTTACGCTTTAGAGATC 59.991 44.000 0.00 0.00 36.09 2.75
2796 4423 5.134661 ACTAGGCTTACGCTTTAGAGATCT 58.865 41.667 0.00 0.00 36.09 2.75
2797 4424 6.297582 ACTAGGCTTACGCTTTAGAGATCTA 58.702 40.000 0.00 0.00 36.09 1.98
2798 4425 5.441709 AGGCTTACGCTTTAGAGATCTAC 57.558 43.478 0.00 0.00 36.09 2.59
2799 4426 4.888239 AGGCTTACGCTTTAGAGATCTACA 59.112 41.667 0.00 0.00 36.09 2.74
2800 4427 4.977347 GGCTTACGCTTTAGAGATCTACAC 59.023 45.833 0.00 0.00 36.09 2.90
2801 4428 5.450137 GGCTTACGCTTTAGAGATCTACACA 60.450 44.000 0.00 0.00 36.09 3.72
2802 4429 6.034591 GCTTACGCTTTAGAGATCTACACAA 58.965 40.000 0.00 0.00 0.00 3.33
2803 4430 6.020520 GCTTACGCTTTAGAGATCTACACAAC 60.021 42.308 0.00 0.00 0.00 3.32
2804 4431 5.386958 ACGCTTTAGAGATCTACACAACA 57.613 39.130 0.00 0.00 0.00 3.33
2805 4432 5.403246 ACGCTTTAGAGATCTACACAACAG 58.597 41.667 0.00 0.00 0.00 3.16
2806 4433 4.800993 CGCTTTAGAGATCTACACAACAGG 59.199 45.833 0.00 0.00 0.00 4.00
2807 4434 5.112686 GCTTTAGAGATCTACACAACAGGG 58.887 45.833 0.00 0.00 0.00 4.45
2808 4435 5.105310 GCTTTAGAGATCTACACAACAGGGA 60.105 44.000 0.00 0.00 0.00 4.20
2809 4436 6.574465 GCTTTAGAGATCTACACAACAGGGAA 60.574 42.308 0.00 0.00 0.00 3.97
2810 4437 6.531503 TTAGAGATCTACACAACAGGGAAG 57.468 41.667 0.00 0.00 0.00 3.46
2811 4438 3.196685 AGAGATCTACACAACAGGGAAGC 59.803 47.826 0.00 0.00 0.00 3.86
2812 4439 2.093973 AGATCTACACAACAGGGAAGCG 60.094 50.000 0.00 0.00 0.00 4.68
2813 4440 0.320374 TCTACACAACAGGGAAGCGG 59.680 55.000 0.00 0.00 0.00 5.52
2814 4441 0.673644 CTACACAACAGGGAAGCGGG 60.674 60.000 0.00 0.00 0.00 6.13
2815 4442 1.412453 TACACAACAGGGAAGCGGGT 61.412 55.000 0.00 0.00 0.00 5.28
2816 4443 1.528309 CACAACAGGGAAGCGGGTT 60.528 57.895 0.00 0.00 0.00 4.11
2817 4444 1.528309 ACAACAGGGAAGCGGGTTG 60.528 57.895 0.00 0.00 44.57 3.77
2818 4445 1.228124 CAACAGGGAAGCGGGTTGA 60.228 57.895 0.00 0.00 42.34 3.18
2819 4446 0.821711 CAACAGGGAAGCGGGTTGAA 60.822 55.000 0.00 0.00 42.34 2.69
2820 4447 0.537371 AACAGGGAAGCGGGTTGAAG 60.537 55.000 0.00 0.00 0.00 3.02
2821 4448 1.374947 CAGGGAAGCGGGTTGAAGA 59.625 57.895 0.00 0.00 0.00 2.87
2822 4449 0.035056 CAGGGAAGCGGGTTGAAGAT 60.035 55.000 0.00 0.00 0.00 2.40
2823 4450 1.209504 CAGGGAAGCGGGTTGAAGATA 59.790 52.381 0.00 0.00 0.00 1.98
2824 4451 1.486726 AGGGAAGCGGGTTGAAGATAG 59.513 52.381 0.00 0.00 0.00 2.08
2825 4452 1.475213 GGGAAGCGGGTTGAAGATAGG 60.475 57.143 0.00 0.00 0.00 2.57
2826 4453 1.485066 GGAAGCGGGTTGAAGATAGGA 59.515 52.381 0.00 0.00 0.00 2.94
2827 4454 2.093128 GGAAGCGGGTTGAAGATAGGAA 60.093 50.000 0.00 0.00 0.00 3.36
2828 4455 3.606687 GAAGCGGGTTGAAGATAGGAAA 58.393 45.455 0.00 0.00 0.00 3.13
2829 4456 2.987232 AGCGGGTTGAAGATAGGAAAC 58.013 47.619 0.00 0.00 0.00 2.78
2830 4457 2.014857 GCGGGTTGAAGATAGGAAACC 58.985 52.381 0.00 0.00 41.14 3.27
2831 4458 2.277084 CGGGTTGAAGATAGGAAACCG 58.723 52.381 0.00 0.00 42.50 4.44
2832 4459 2.093869 CGGGTTGAAGATAGGAAACCGA 60.094 50.000 0.00 0.00 42.50 4.69
2833 4460 3.431766 CGGGTTGAAGATAGGAAACCGAT 60.432 47.826 0.00 0.00 42.50 4.18
2834 4461 4.524053 GGGTTGAAGATAGGAAACCGATT 58.476 43.478 0.00 0.00 42.50 3.34
2835 4462 4.575236 GGGTTGAAGATAGGAAACCGATTC 59.425 45.833 0.00 0.00 42.50 2.52
2836 4463 5.183228 GGTTGAAGATAGGAAACCGATTCA 58.817 41.667 3.81 0.00 39.98 2.57
2837 4464 5.294552 GGTTGAAGATAGGAAACCGATTCAG 59.705 44.000 3.81 0.00 39.98 3.02
2838 4465 5.932619 TGAAGATAGGAAACCGATTCAGA 57.067 39.130 3.81 0.00 39.98 3.27
2839 4466 6.485830 TGAAGATAGGAAACCGATTCAGAT 57.514 37.500 3.81 0.00 39.98 2.90
2840 4467 6.516718 TGAAGATAGGAAACCGATTCAGATC 58.483 40.000 3.81 0.00 39.98 2.75
2841 4468 5.476091 AGATAGGAAACCGATTCAGATCC 57.524 43.478 0.00 0.00 39.98 3.36
2842 4469 4.901849 AGATAGGAAACCGATTCAGATCCA 59.098 41.667 0.00 0.00 39.98 3.41
2843 4470 3.550437 AGGAAACCGATTCAGATCCAG 57.450 47.619 0.00 0.00 39.98 3.86
2844 4471 1.943340 GGAAACCGATTCAGATCCAGC 59.057 52.381 0.00 0.00 39.98 4.85
2845 4472 1.594862 GAAACCGATTCAGATCCAGCG 59.405 52.381 0.00 0.00 37.99 5.18
2846 4473 0.179073 AACCGATTCAGATCCAGCGG 60.179 55.000 11.23 11.23 43.95 5.52
2847 4474 1.330655 ACCGATTCAGATCCAGCGGT 61.331 55.000 12.38 12.38 46.10 5.68
2848 4475 0.598680 CCGATTCAGATCCAGCGGTC 60.599 60.000 5.83 0.00 34.45 4.79
2849 4476 0.598680 CGATTCAGATCCAGCGGTCC 60.599 60.000 0.00 0.00 0.00 4.46
2850 4477 0.465705 GATTCAGATCCAGCGGTCCA 59.534 55.000 0.00 0.00 0.00 4.02
2851 4478 0.911769 ATTCAGATCCAGCGGTCCAA 59.088 50.000 0.00 0.00 0.00 3.53
2852 4479 0.690192 TTCAGATCCAGCGGTCCAAA 59.310 50.000 0.00 0.00 0.00 3.28
2853 4480 0.250234 TCAGATCCAGCGGTCCAAAG 59.750 55.000 0.00 0.00 0.00 2.77
2854 4481 0.250234 CAGATCCAGCGGTCCAAAGA 59.750 55.000 0.00 0.00 0.00 2.52
2855 4482 1.134280 CAGATCCAGCGGTCCAAAGAT 60.134 52.381 0.00 0.00 0.00 2.40
2856 4483 1.561542 AGATCCAGCGGTCCAAAGATT 59.438 47.619 0.00 0.00 0.00 2.40
2857 4484 1.672881 GATCCAGCGGTCCAAAGATTG 59.327 52.381 0.00 0.00 0.00 2.67
2858 4485 0.690192 TCCAGCGGTCCAAAGATTGA 59.310 50.000 0.00 0.00 0.00 2.57
2859 4486 0.804989 CCAGCGGTCCAAAGATTGAC 59.195 55.000 0.00 0.00 0.00 3.18
2860 4487 1.611673 CCAGCGGTCCAAAGATTGACT 60.612 52.381 0.00 0.00 0.00 3.41
2861 4488 2.154462 CAGCGGTCCAAAGATTGACTT 58.846 47.619 0.00 0.00 40.98 3.01
2862 4489 2.095567 CAGCGGTCCAAAGATTGACTTG 60.096 50.000 0.00 0.00 38.98 3.16
2863 4490 2.151202 GCGGTCCAAAGATTGACTTGA 58.849 47.619 0.00 0.00 38.98 3.02
2864 4491 2.552315 GCGGTCCAAAGATTGACTTGAA 59.448 45.455 0.00 0.00 38.98 2.69
2865 4492 3.191371 GCGGTCCAAAGATTGACTTGAAT 59.809 43.478 0.00 0.00 38.98 2.57
2866 4493 4.321230 GCGGTCCAAAGATTGACTTGAATT 60.321 41.667 0.00 0.00 38.98 2.17
2867 4494 5.156355 CGGTCCAAAGATTGACTTGAATTG 58.844 41.667 0.00 0.00 38.98 2.32
2868 4495 5.048782 CGGTCCAAAGATTGACTTGAATTGA 60.049 40.000 0.00 0.00 38.98 2.57
2869 4496 6.514870 CGGTCCAAAGATTGACTTGAATTGAA 60.515 38.462 0.00 0.00 38.98 2.69
2870 4497 6.865205 GGTCCAAAGATTGACTTGAATTGAAG 59.135 38.462 2.83 2.83 38.98 3.02
2871 4498 6.865205 GTCCAAAGATTGACTTGAATTGAAGG 59.135 38.462 9.54 0.00 38.98 3.46
2872 4499 6.777091 TCCAAAGATTGACTTGAATTGAAGGA 59.223 34.615 9.54 0.00 38.98 3.36
2873 4500 7.287466 TCCAAAGATTGACTTGAATTGAAGGAA 59.713 33.333 9.54 2.21 38.98 3.36
2874 4501 7.927629 CCAAAGATTGACTTGAATTGAAGGAAA 59.072 33.333 9.54 3.56 38.98 3.13
2875 4502 9.316730 CAAAGATTGACTTGAATTGAAGGAAAA 57.683 29.630 9.54 1.23 38.98 2.29
2876 4503 8.877808 AAGATTGACTTGAATTGAAGGAAAAC 57.122 30.769 9.54 2.51 37.45 2.43
2877 4504 8.242729 AGATTGACTTGAATTGAAGGAAAACT 57.757 30.769 9.54 4.54 0.00 2.66
2878 4505 8.699130 AGATTGACTTGAATTGAAGGAAAACTT 58.301 29.630 9.54 0.00 43.65 2.66
2879 4506 9.317936 GATTGACTTGAATTGAAGGAAAACTTT 57.682 29.630 9.54 0.00 40.21 2.66
2880 4507 8.702163 TTGACTTGAATTGAAGGAAAACTTTC 57.298 30.769 9.54 0.00 40.21 2.62
2881 4508 8.066612 TGACTTGAATTGAAGGAAAACTTTCT 57.933 30.769 9.54 0.00 40.21 2.52
2882 4509 8.531146 TGACTTGAATTGAAGGAAAACTTTCTT 58.469 29.630 9.54 0.00 40.21 2.52
2883 4510 8.932945 ACTTGAATTGAAGGAAAACTTTCTTC 57.067 30.769 9.54 1.13 40.21 2.87
2884 4511 8.531146 ACTTGAATTGAAGGAAAACTTTCTTCA 58.469 29.630 9.54 6.10 40.21 3.02
2885 4512 8.702163 TTGAATTGAAGGAAAACTTTCTTCAC 57.298 30.769 9.22 1.01 40.21 3.18
2886 4513 8.066612 TGAATTGAAGGAAAACTTTCTTCACT 57.933 30.769 9.22 2.73 40.21 3.41
2887 4514 7.975616 TGAATTGAAGGAAAACTTTCTTCACTG 59.024 33.333 9.22 0.00 40.21 3.66
2888 4515 5.248870 TGAAGGAAAACTTTCTTCACTGC 57.751 39.130 6.10 0.00 40.21 4.40
2889 4516 4.097892 TGAAGGAAAACTTTCTTCACTGCC 59.902 41.667 6.10 0.00 40.21 4.85
2890 4517 3.631250 AGGAAAACTTTCTTCACTGCCA 58.369 40.909 2.41 0.00 37.35 4.92
2891 4518 4.023291 AGGAAAACTTTCTTCACTGCCAA 58.977 39.130 2.41 0.00 37.35 4.52
2892 4519 4.466015 AGGAAAACTTTCTTCACTGCCAAA 59.534 37.500 2.41 0.00 37.35 3.28
2893 4520 5.046663 AGGAAAACTTTCTTCACTGCCAAAA 60.047 36.000 2.41 0.00 37.35 2.44
2894 4521 5.291858 GGAAAACTTTCTTCACTGCCAAAAG 59.708 40.000 2.41 0.00 37.35 2.27
2895 4522 4.391405 AACTTTCTTCACTGCCAAAAGG 57.609 40.909 0.00 0.00 32.53 3.11
2896 4523 3.365472 ACTTTCTTCACTGCCAAAAGGT 58.635 40.909 0.00 0.00 32.53 3.50
2897 4524 3.769300 ACTTTCTTCACTGCCAAAAGGTT 59.231 39.130 0.00 0.00 32.53 3.50
2898 4525 3.799281 TTCTTCACTGCCAAAAGGTTG 57.201 42.857 0.00 0.00 34.25 3.77
2909 4536 2.171003 CAAAAGGTTGGCTCCCTTAGG 58.829 52.381 8.38 0.00 41.47 2.69
2910 4537 0.704664 AAAGGTTGGCTCCCTTAGGG 59.295 55.000 11.94 11.94 41.47 3.53
2911 4538 1.864263 AAGGTTGGCTCCCTTAGGGC 61.864 60.000 13.54 1.09 43.94 5.19
2912 4539 2.612493 GGTTGGCTCCCTTAGGGCA 61.612 63.158 13.54 1.71 43.94 5.36
2913 4540 1.615262 GTTGGCTCCCTTAGGGCAT 59.385 57.895 13.54 0.00 43.94 4.40
2914 4541 0.753111 GTTGGCTCCCTTAGGGCATG 60.753 60.000 13.54 6.43 43.94 4.06
2915 4542 1.214305 TTGGCTCCCTTAGGGCATGT 61.214 55.000 13.54 0.00 43.94 3.21
2916 4543 0.327095 TGGCTCCCTTAGGGCATGTA 60.327 55.000 13.54 0.00 43.94 2.29
2917 4544 0.108774 GGCTCCCTTAGGGCATGTAC 59.891 60.000 13.54 0.00 43.94 2.90
2918 4545 0.837272 GCTCCCTTAGGGCATGTACA 59.163 55.000 13.54 0.00 43.94 2.90
2919 4546 1.211949 GCTCCCTTAGGGCATGTACAA 59.788 52.381 13.54 0.00 43.94 2.41
2920 4547 2.158608 GCTCCCTTAGGGCATGTACAAT 60.159 50.000 13.54 0.00 43.94 2.71
2921 4548 3.072476 GCTCCCTTAGGGCATGTACAATA 59.928 47.826 13.54 0.00 43.94 1.90
2922 4549 4.804261 GCTCCCTTAGGGCATGTACAATAG 60.804 50.000 13.54 1.52 43.94 1.73
2923 4550 4.303794 TCCCTTAGGGCATGTACAATAGT 58.696 43.478 13.54 0.00 43.94 2.12
2924 4551 4.102524 TCCCTTAGGGCATGTACAATAGTG 59.897 45.833 13.54 0.00 43.94 2.74
2925 4552 3.815401 CCTTAGGGCATGTACAATAGTGC 59.185 47.826 10.12 10.12 36.88 4.40
2926 4553 4.444876 CCTTAGGGCATGTACAATAGTGCT 60.445 45.833 16.47 3.38 37.70 4.40
2927 4554 5.221641 CCTTAGGGCATGTACAATAGTGCTA 60.222 44.000 16.47 2.55 37.70 3.49
2928 4555 4.342862 AGGGCATGTACAATAGTGCTAG 57.657 45.455 16.47 0.00 37.70 3.42
2929 4556 2.808543 GGGCATGTACAATAGTGCTAGC 59.191 50.000 16.47 8.10 37.70 3.42
2930 4557 3.495100 GGGCATGTACAATAGTGCTAGCT 60.495 47.826 17.23 0.00 37.70 3.32
2931 4558 4.130118 GGCATGTACAATAGTGCTAGCTT 58.870 43.478 17.23 6.91 37.70 3.74
2932 4559 5.297547 GGCATGTACAATAGTGCTAGCTTA 58.702 41.667 17.23 9.03 37.70 3.09
2933 4560 5.934625 GGCATGTACAATAGTGCTAGCTTAT 59.065 40.000 17.23 10.95 37.70 1.73
2934 4561 6.128445 GGCATGTACAATAGTGCTAGCTTATG 60.128 42.308 17.23 10.15 37.70 1.90
2935 4562 6.646653 GCATGTACAATAGTGCTAGCTTATGA 59.353 38.462 17.23 0.00 34.85 2.15
2936 4563 7.148672 GCATGTACAATAGTGCTAGCTTATGAG 60.149 40.741 17.23 11.92 34.85 2.90
2937 4564 7.348080 TGTACAATAGTGCTAGCTTATGAGT 57.652 36.000 17.23 16.04 0.00 3.41
2938 4565 7.203218 TGTACAATAGTGCTAGCTTATGAGTG 58.797 38.462 17.23 11.07 0.00 3.51
2939 4566 5.053145 ACAATAGTGCTAGCTTATGAGTGC 58.947 41.667 17.23 0.00 0.00 4.40
2940 4567 2.611225 AGTGCTAGCTTATGAGTGCC 57.389 50.000 17.23 0.00 0.00 5.01
2941 4568 1.833630 AGTGCTAGCTTATGAGTGCCA 59.166 47.619 17.23 0.00 0.00 4.92
2942 4569 2.437281 AGTGCTAGCTTATGAGTGCCAT 59.563 45.455 17.23 0.00 39.25 4.40
2943 4570 2.547211 GTGCTAGCTTATGAGTGCCATG 59.453 50.000 17.23 0.00 36.71 3.66
2944 4571 2.171237 TGCTAGCTTATGAGTGCCATGT 59.829 45.455 17.23 0.00 36.71 3.21
2945 4572 3.387699 TGCTAGCTTATGAGTGCCATGTA 59.612 43.478 17.23 0.00 36.71 2.29
2946 4573 3.993081 GCTAGCTTATGAGTGCCATGTAG 59.007 47.826 7.70 0.00 36.71 2.74
2947 4574 3.482156 AGCTTATGAGTGCCATGTAGG 57.518 47.619 0.00 0.00 41.84 3.18
2948 4575 3.041211 AGCTTATGAGTGCCATGTAGGA 58.959 45.455 0.00 0.00 41.22 2.94
2949 4576 3.649981 AGCTTATGAGTGCCATGTAGGAT 59.350 43.478 0.00 0.00 41.22 3.24
2950 4577 4.840680 AGCTTATGAGTGCCATGTAGGATA 59.159 41.667 0.00 0.00 41.22 2.59
2951 4578 5.307976 AGCTTATGAGTGCCATGTAGGATAA 59.692 40.000 0.00 0.00 41.22 1.75
2952 4579 5.997746 GCTTATGAGTGCCATGTAGGATAAA 59.002 40.000 0.00 0.00 41.22 1.40
2953 4580 6.656693 GCTTATGAGTGCCATGTAGGATAAAT 59.343 38.462 0.00 0.00 41.22 1.40
2954 4581 7.824289 GCTTATGAGTGCCATGTAGGATAAATA 59.176 37.037 0.00 0.00 41.22 1.40
2955 4582 9.725019 CTTATGAGTGCCATGTAGGATAAATAA 57.275 33.333 0.00 0.00 41.22 1.40
2957 4584 7.984422 TGAGTGCCATGTAGGATAAATAATG 57.016 36.000 0.00 0.00 41.22 1.90
2958 4585 7.744733 TGAGTGCCATGTAGGATAAATAATGA 58.255 34.615 0.00 0.00 41.22 2.57
2959 4586 7.879677 TGAGTGCCATGTAGGATAAATAATGAG 59.120 37.037 0.00 0.00 41.22 2.90
2960 4587 7.170965 AGTGCCATGTAGGATAAATAATGAGG 58.829 38.462 0.00 0.00 41.22 3.86
2961 4588 6.942576 GTGCCATGTAGGATAAATAATGAGGT 59.057 38.462 0.00 0.00 41.22 3.85
2962 4589 6.942005 TGCCATGTAGGATAAATAATGAGGTG 59.058 38.462 0.00 0.00 41.22 4.00
2963 4590 6.375455 GCCATGTAGGATAAATAATGAGGTGG 59.625 42.308 0.00 0.00 41.22 4.61
2964 4591 7.689299 CCATGTAGGATAAATAATGAGGTGGA 58.311 38.462 0.00 0.00 41.22 4.02
2965 4592 7.826252 CCATGTAGGATAAATAATGAGGTGGAG 59.174 40.741 0.00 0.00 41.22 3.86
2966 4593 7.316393 TGTAGGATAAATAATGAGGTGGAGG 57.684 40.000 0.00 0.00 0.00 4.30
2967 4594 7.079700 TGTAGGATAAATAATGAGGTGGAGGA 58.920 38.462 0.00 0.00 0.00 3.71
2968 4595 6.694445 AGGATAAATAATGAGGTGGAGGAG 57.306 41.667 0.00 0.00 0.00 3.69
2969 4596 6.393897 AGGATAAATAATGAGGTGGAGGAGA 58.606 40.000 0.00 0.00 0.00 3.71
2970 4597 6.500049 AGGATAAATAATGAGGTGGAGGAGAG 59.500 42.308 0.00 0.00 0.00 3.20
2971 4598 6.498651 GGATAAATAATGAGGTGGAGGAGAGA 59.501 42.308 0.00 0.00 0.00 3.10
2972 4599 5.885449 AAATAATGAGGTGGAGGAGAGAG 57.115 43.478 0.00 0.00 0.00 3.20
2973 4600 4.823364 ATAATGAGGTGGAGGAGAGAGA 57.177 45.455 0.00 0.00 0.00 3.10
2974 4601 3.481559 AATGAGGTGGAGGAGAGAGAA 57.518 47.619 0.00 0.00 0.00 2.87
2975 4602 2.223803 TGAGGTGGAGGAGAGAGAAC 57.776 55.000 0.00 0.00 0.00 3.01
2976 4603 1.713647 TGAGGTGGAGGAGAGAGAACT 59.286 52.381 0.00 0.00 0.00 3.01
2977 4604 2.920271 TGAGGTGGAGGAGAGAGAACTA 59.080 50.000 0.00 0.00 0.00 2.24
2978 4605 3.333980 TGAGGTGGAGGAGAGAGAACTAA 59.666 47.826 0.00 0.00 0.00 2.24
2979 4606 4.017037 TGAGGTGGAGGAGAGAGAACTAAT 60.017 45.833 0.00 0.00 0.00 1.73
2980 4607 5.193930 TGAGGTGGAGGAGAGAGAACTAATA 59.806 44.000 0.00 0.00 0.00 0.98
2981 4608 6.093617 AGGTGGAGGAGAGAGAACTAATAA 57.906 41.667 0.00 0.00 0.00 1.40
2982 4609 6.133356 AGGTGGAGGAGAGAGAACTAATAAG 58.867 44.000 0.00 0.00 0.00 1.73
2983 4610 6.068735 AGGTGGAGGAGAGAGAACTAATAAGA 60.069 42.308 0.00 0.00 0.00 2.10
2984 4611 6.608002 GGTGGAGGAGAGAGAACTAATAAGAA 59.392 42.308 0.00 0.00 0.00 2.52
2985 4612 7.124448 GGTGGAGGAGAGAGAACTAATAAGAAA 59.876 40.741 0.00 0.00 0.00 2.52
2986 4613 8.532819 GTGGAGGAGAGAGAACTAATAAGAAAA 58.467 37.037 0.00 0.00 0.00 2.29
2987 4614 8.754080 TGGAGGAGAGAGAACTAATAAGAAAAG 58.246 37.037 0.00 0.00 0.00 2.27
2988 4615 8.201464 GGAGGAGAGAGAACTAATAAGAAAAGG 58.799 40.741 0.00 0.00 0.00 3.11
2989 4616 7.561251 AGGAGAGAGAACTAATAAGAAAAGGC 58.439 38.462 0.00 0.00 0.00 4.35
2990 4617 7.401782 AGGAGAGAGAACTAATAAGAAAAGGCT 59.598 37.037 0.00 0.00 0.00 4.58
2991 4618 8.044309 GGAGAGAGAACTAATAAGAAAAGGCTT 58.956 37.037 0.00 0.00 0.00 4.35
2992 4619 8.785329 AGAGAGAACTAATAAGAAAAGGCTTG 57.215 34.615 0.00 0.00 0.00 4.01
2993 4620 8.379331 AGAGAGAACTAATAAGAAAAGGCTTGT 58.621 33.333 0.00 0.00 0.00 3.16
2994 4621 8.554835 AGAGAACTAATAAGAAAAGGCTTGTC 57.445 34.615 9.51 9.51 0.00 3.18
2995 4622 8.379331 AGAGAACTAATAAGAAAAGGCTTGTCT 58.621 33.333 14.33 14.33 0.00 3.41
2996 4623 8.926092 AGAACTAATAAGAAAAGGCTTGTCTT 57.074 30.769 30.04 30.04 35.77 3.01
2997 4624 9.004717 AGAACTAATAAGAAAAGGCTTGTCTTC 57.995 33.333 30.86 17.63 33.70 2.87
2998 4625 8.926092 AACTAATAAGAAAAGGCTTGTCTTCT 57.074 30.769 30.86 21.01 33.70 2.85
2999 4626 8.554835 ACTAATAAGAAAAGGCTTGTCTTCTC 57.445 34.615 30.86 8.39 33.70 2.87
3000 4627 8.379331 ACTAATAAGAAAAGGCTTGTCTTCTCT 58.621 33.333 30.86 19.87 33.70 3.10
3001 4628 9.225436 CTAATAAGAAAAGGCTTGTCTTCTCTT 57.775 33.333 30.86 23.64 37.66 2.85
3003 4630 9.746457 AATAAGAAAAGGCTTGTCTTCTCTTAT 57.254 29.630 30.86 18.17 43.38 1.73
3004 4631 9.746457 ATAAGAAAAGGCTTGTCTTCTCTTATT 57.254 29.630 30.86 11.70 40.94 1.40
3005 4632 8.470657 AAGAAAAGGCTTGTCTTCTCTTATTT 57.529 30.769 23.96 2.07 33.68 1.40
3006 4633 9.574516 AAGAAAAGGCTTGTCTTCTCTTATTTA 57.425 29.630 23.96 0.00 33.68 1.40
3007 4634 9.574516 AGAAAAGGCTTGTCTTCTCTTATTTAA 57.425 29.630 14.33 0.00 0.00 1.52
3008 4635 9.833182 GAAAAGGCTTGTCTTCTCTTATTTAAG 57.167 33.333 10.26 0.00 34.65 1.85
3009 4636 9.574516 AAAAGGCTTGTCTTCTCTTATTTAAGA 57.425 29.630 0.00 0.44 39.82 2.10
3010 4637 9.746457 AAAGGCTTGTCTTCTCTTATTTAAGAT 57.254 29.630 0.00 0.00 41.12 2.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
74 77 3.251479 TGCACTACGCTCAGAATCAAT 57.749 42.857 0.00 0.00 43.06 2.57
119 123 2.374226 GCTTGGCGCGTTACGTACA 61.374 57.895 8.43 0.27 46.11 2.90
131 135 2.048877 AAACTGCATGCGCTTGGC 60.049 55.556 22.96 16.78 43.96 4.52
132 136 1.444895 GGAAACTGCATGCGCTTGG 60.445 57.895 22.96 11.01 39.64 3.61
133 137 0.038892 AAGGAAACTGCATGCGCTTG 60.039 50.000 18.27 18.27 42.68 4.01
134 138 0.242017 GAAGGAAACTGCATGCGCTT 59.758 50.000 14.09 5.79 42.68 4.68
156 209 2.180159 TAGTGAAGGGCAACTCGGGC 62.180 60.000 0.00 0.00 0.00 6.13
162 215 0.872388 CGTGGTTAGTGAAGGGCAAC 59.128 55.000 0.00 0.00 0.00 4.17
170 223 0.675083 TCGAAAGCCGTGGTTAGTGA 59.325 50.000 0.00 0.00 39.75 3.41
212 301 1.024579 AAATTACGCGCCCTGGTCTG 61.025 55.000 5.73 0.00 0.00 3.51
220 314 1.459464 CGCAAAAACAAATTACGCGCC 60.459 47.619 5.73 0.00 35.77 6.53
237 331 1.435515 GGTGCAAGGAAACAACGCA 59.564 52.632 0.00 0.00 0.00 5.24
238 332 1.299850 GGGTGCAAGGAAACAACGC 60.300 57.895 0.00 0.00 0.00 4.84
240 334 0.827368 TTGGGGTGCAAGGAAACAAC 59.173 50.000 0.00 0.00 0.00 3.32
434 606 6.598064 TCCGTTTCAATCTCTCCCTAAATTTC 59.402 38.462 0.00 0.00 0.00 2.17
570 752 1.452833 GCAGGCAAGTCTCATCCCC 60.453 63.158 0.00 0.00 0.00 4.81
571 753 0.463474 GAGCAGGCAAGTCTCATCCC 60.463 60.000 0.00 0.00 0.00 3.85
572 754 0.463474 GGAGCAGGCAAGTCTCATCC 60.463 60.000 0.00 0.00 0.00 3.51
573 755 0.463474 GGGAGCAGGCAAGTCTCATC 60.463 60.000 0.00 0.00 0.00 2.92
574 756 0.913451 AGGGAGCAGGCAAGTCTCAT 60.913 55.000 0.00 0.00 0.00 2.90
575 757 1.130054 AAGGGAGCAGGCAAGTCTCA 61.130 55.000 0.00 0.00 0.00 3.27
576 758 0.037447 AAAGGGAGCAGGCAAGTCTC 59.963 55.000 0.00 0.00 0.00 3.36
578 760 0.037447 AGAAAGGGAGCAGGCAAGTC 59.963 55.000 0.00 0.00 0.00 3.01
579 761 1.362224 TAGAAAGGGAGCAGGCAAGT 58.638 50.000 0.00 0.00 0.00 3.16
580 762 2.295885 CATAGAAAGGGAGCAGGCAAG 58.704 52.381 0.00 0.00 0.00 4.01
581 763 1.683011 GCATAGAAAGGGAGCAGGCAA 60.683 52.381 0.00 0.00 0.00 4.52
582 764 0.107017 GCATAGAAAGGGAGCAGGCA 60.107 55.000 0.00 0.00 0.00 4.75
583 765 0.182299 AGCATAGAAAGGGAGCAGGC 59.818 55.000 0.00 0.00 0.00 4.85
584 766 1.202746 GGAGCATAGAAAGGGAGCAGG 60.203 57.143 0.00 0.00 0.00 4.85
585 767 1.202746 GGGAGCATAGAAAGGGAGCAG 60.203 57.143 0.00 0.00 0.00 4.24
586 768 0.839946 GGGAGCATAGAAAGGGAGCA 59.160 55.000 0.00 0.00 0.00 4.26
587 769 0.839946 TGGGAGCATAGAAAGGGAGC 59.160 55.000 0.00 0.00 0.00 4.70
589 771 2.057922 GGATGGGAGCATAGAAAGGGA 58.942 52.381 0.00 0.00 0.00 4.20
594 776 0.106708 GCACGGATGGGAGCATAGAA 59.893 55.000 0.00 0.00 0.00 2.10
596 778 0.107456 AAGCACGGATGGGAGCATAG 59.893 55.000 0.00 0.00 0.00 2.23
597 779 0.106708 GAAGCACGGATGGGAGCATA 59.893 55.000 0.00 0.00 0.00 3.14
598 780 1.153086 GAAGCACGGATGGGAGCAT 60.153 57.895 0.00 0.00 0.00 3.79
599 781 2.268920 GAAGCACGGATGGGAGCA 59.731 61.111 0.00 0.00 0.00 4.26
600 782 2.514824 GGAAGCACGGATGGGAGC 60.515 66.667 0.00 0.00 0.00 4.70
601 783 2.202932 CGGAAGCACGGATGGGAG 60.203 66.667 0.00 0.00 0.00 4.30
613 795 2.431942 AAGCCACGTACGCGGAAG 60.432 61.111 25.84 6.98 43.45 3.46
614 796 2.495366 ATCAAGCCACGTACGCGGAA 62.495 55.000 25.84 7.91 43.45 4.30
615 797 2.495366 AATCAAGCCACGTACGCGGA 62.495 55.000 25.84 0.00 43.45 5.54
616 798 1.632046 AAATCAAGCCACGTACGCGG 61.632 55.000 17.94 17.94 43.45 6.46
618 800 0.793861 TCAAATCAAGCCACGTACGC 59.206 50.000 16.72 0.00 0.00 4.42
619 801 3.416277 CATTCAAATCAAGCCACGTACG 58.584 45.455 15.01 15.01 0.00 3.67
620 802 3.438781 TCCATTCAAATCAAGCCACGTAC 59.561 43.478 0.00 0.00 0.00 3.67
623 805 3.788333 ATCCATTCAAATCAAGCCACG 57.212 42.857 0.00 0.00 0.00 4.94
624 806 6.268566 GTCTTATCCATTCAAATCAAGCCAC 58.731 40.000 0.00 0.00 0.00 5.01
625 807 5.360714 GGTCTTATCCATTCAAATCAAGCCA 59.639 40.000 0.00 0.00 0.00 4.75
626 808 5.221322 GGGTCTTATCCATTCAAATCAAGCC 60.221 44.000 0.00 0.00 0.00 4.35
627 809 5.506317 CGGGTCTTATCCATTCAAATCAAGC 60.506 44.000 0.00 0.00 0.00 4.01
628 810 5.009010 CCGGGTCTTATCCATTCAAATCAAG 59.991 44.000 0.00 0.00 0.00 3.02
629 811 4.887071 CCGGGTCTTATCCATTCAAATCAA 59.113 41.667 0.00 0.00 0.00 2.57
632 814 3.222603 GCCGGGTCTTATCCATTCAAAT 58.777 45.455 2.18 0.00 0.00 2.32
633 815 2.650322 GCCGGGTCTTATCCATTCAAA 58.350 47.619 2.18 0.00 0.00 2.69
635 817 0.472471 GGCCGGGTCTTATCCATTCA 59.528 55.000 2.18 0.00 0.00 2.57
636 818 0.250770 GGGCCGGGTCTTATCCATTC 60.251 60.000 2.18 0.00 0.00 2.67
638 820 2.154074 GGGGCCGGGTCTTATCCAT 61.154 63.158 2.18 0.00 0.00 3.41
639 821 2.770904 GGGGCCGGGTCTTATCCA 60.771 66.667 2.18 0.00 0.00 3.41
641 823 2.509422 GTGGGGCCGGGTCTTATC 59.491 66.667 2.18 0.00 0.00 1.75
651 833 3.252585 ATTTTCAGGGGGTGGGGCC 62.253 63.158 0.00 0.00 0.00 5.80
652 834 1.685765 GATTTTCAGGGGGTGGGGC 60.686 63.158 0.00 0.00 0.00 5.80
654 836 3.288099 CTGATTTTCAGGGGGTGGG 57.712 57.895 0.00 0.00 40.71 4.61
674 856 7.560796 TCTTTCTAATCTAATCATCTCCCCC 57.439 40.000 0.00 0.00 0.00 5.40
675 857 9.853177 TTTTCTTTCTAATCTAATCATCTCCCC 57.147 33.333 0.00 0.00 0.00 4.81
701 883 1.780503 ACAGCTGCCCTTTTCACTTT 58.219 45.000 15.27 0.00 0.00 2.66
702 884 2.508526 CTACAGCTGCCCTTTTCACTT 58.491 47.619 15.27 0.00 0.00 3.16
704 886 1.168714 CCTACAGCTGCCCTTTTCAC 58.831 55.000 15.27 0.00 0.00 3.18
705 887 1.064003 TCCTACAGCTGCCCTTTTCA 58.936 50.000 15.27 0.00 0.00 2.69
706 888 2.019984 CATCCTACAGCTGCCCTTTTC 58.980 52.381 15.27 0.00 0.00 2.29
708 890 1.289160 TCATCCTACAGCTGCCCTTT 58.711 50.000 15.27 0.00 0.00 3.11
711 893 0.543749 ACTTCATCCTACAGCTGCCC 59.456 55.000 15.27 0.00 0.00 5.36
712 894 1.661341 CACTTCATCCTACAGCTGCC 58.339 55.000 15.27 0.00 0.00 4.85
713 895 1.661341 CCACTTCATCCTACAGCTGC 58.339 55.000 15.27 0.00 0.00 5.25
714 896 1.833630 TCCCACTTCATCCTACAGCTG 59.166 52.381 13.48 13.48 0.00 4.24
715 897 2.114616 CTCCCACTTCATCCTACAGCT 58.885 52.381 0.00 0.00 0.00 4.24
716 898 1.474143 GCTCCCACTTCATCCTACAGC 60.474 57.143 0.00 0.00 0.00 4.40
717 899 1.833630 TGCTCCCACTTCATCCTACAG 59.166 52.381 0.00 0.00 0.00 2.74
718 900 1.555075 GTGCTCCCACTTCATCCTACA 59.445 52.381 0.00 0.00 38.93 2.74
719 901 1.471676 CGTGCTCCCACTTCATCCTAC 60.472 57.143 0.00 0.00 39.86 3.18
720 902 0.824109 CGTGCTCCCACTTCATCCTA 59.176 55.000 0.00 0.00 39.86 2.94
721 903 1.599047 CGTGCTCCCACTTCATCCT 59.401 57.895 0.00 0.00 39.86 3.24
722 904 1.450312 CCGTGCTCCCACTTCATCC 60.450 63.158 0.00 0.00 39.86 3.51
723 905 0.179000 ATCCGTGCTCCCACTTCATC 59.821 55.000 0.00 0.00 39.86 2.92
724 906 0.107508 CATCCGTGCTCCCACTTCAT 60.108 55.000 0.00 0.00 39.86 2.57
725 907 1.296392 CATCCGTGCTCCCACTTCA 59.704 57.895 0.00 0.00 39.86 3.02
726 908 1.450312 CCATCCGTGCTCCCACTTC 60.450 63.158 0.00 0.00 39.86 3.01
727 909 2.671070 CCATCCGTGCTCCCACTT 59.329 61.111 0.00 0.00 39.86 3.16
728 910 3.402681 CCCATCCGTGCTCCCACT 61.403 66.667 0.00 0.00 39.86 4.00
729 911 3.391665 CTCCCATCCGTGCTCCCAC 62.392 68.421 0.00 0.00 38.62 4.61
732 914 3.112205 ATGCTCCCATCCGTGCTCC 62.112 63.158 0.00 0.00 0.00 4.70
733 915 1.890979 CATGCTCCCATCCGTGCTC 60.891 63.158 0.00 0.00 0.00 4.26
734 916 2.191375 CATGCTCCCATCCGTGCT 59.809 61.111 0.00 0.00 0.00 4.40
735 917 2.903855 CCATGCTCCCATCCGTGC 60.904 66.667 0.00 0.00 0.00 5.34
736 918 2.203252 CCCATGCTCCCATCCGTG 60.203 66.667 0.00 0.00 0.00 4.94
737 919 1.570857 TTTCCCATGCTCCCATCCGT 61.571 55.000 0.00 0.00 0.00 4.69
739 921 0.468771 CCTTTCCCATGCTCCCATCC 60.469 60.000 0.00 0.00 0.00 3.51
740 922 0.552848 TCCTTTCCCATGCTCCCATC 59.447 55.000 0.00 0.00 0.00 3.51
741 923 0.554792 CTCCTTTCCCATGCTCCCAT 59.445 55.000 0.00 0.00 0.00 4.00
742 924 2.001803 CTCCTTTCCCATGCTCCCA 58.998 57.895 0.00 0.00 0.00 4.37
744 926 0.750911 CTGCTCCTTTCCCATGCTCC 60.751 60.000 0.00 0.00 0.00 4.70
746 928 1.305623 CCTGCTCCTTTCCCATGCT 59.694 57.895 0.00 0.00 0.00 3.79
747 929 2.421399 GCCTGCTCCTTTCCCATGC 61.421 63.158 0.00 0.00 0.00 4.06
751 933 2.346541 GCTTGCCTGCTCCTTTCCC 61.347 63.158 0.00 0.00 0.00 3.97
754 936 2.674380 CGGCTTGCCTGCTCCTTT 60.674 61.111 10.12 0.00 0.00 3.11
757 939 4.496336 ATCCGGCTTGCCTGCTCC 62.496 66.667 10.12 0.00 0.00 4.70
758 940 2.899339 GATCCGGCTTGCCTGCTC 60.899 66.667 10.12 0.76 0.00 4.26
801 996 2.635338 GTGCGTGACCGGGTTTTC 59.365 61.111 6.32 0.00 33.68 2.29
882 1100 1.887707 GGTCATTGATCGGCCGGAC 60.888 63.158 27.83 22.14 0.00 4.79
885 1103 3.640000 GCGGTCATTGATCGGCCG 61.640 66.667 22.12 22.12 44.60 6.13
894 1112 2.351276 GTGGGAGGTGCGGTCATT 59.649 61.111 0.00 0.00 0.00 2.57
1239 1491 0.177604 CCTTCTTCGCCAGATCAGCT 59.822 55.000 6.24 0.00 0.00 4.24
1268 1520 0.670546 CATTTCCTGAGCACCGTCGT 60.671 55.000 0.00 0.00 0.00 4.34
1290 1542 4.913126 CGCCTCCGCTTCTTAGTT 57.087 55.556 0.00 0.00 0.00 2.24
1361 1613 0.450583 GACGTCCGTGATCTGCTGTA 59.549 55.000 3.51 0.00 0.00 2.74
1893 2214 3.598715 GGCAGCAGCAGCACAACA 61.599 61.111 12.41 0.00 45.49 3.33
2196 3799 3.940209 TGAACAATTGATCCAACAGCC 57.060 42.857 13.59 0.00 0.00 4.85
2326 3951 0.389948 CCACCGTGCTCACCTAAGTC 60.390 60.000 0.00 0.00 0.00 3.01
2327 3952 0.830444 TCCACCGTGCTCACCTAAGT 60.830 55.000 0.00 0.00 0.00 2.24
2328 3953 0.320374 TTCCACCGTGCTCACCTAAG 59.680 55.000 0.00 0.00 0.00 2.18
2329 3954 0.320374 CTTCCACCGTGCTCACCTAA 59.680 55.000 0.00 0.00 0.00 2.69
2330 3955 0.541063 TCTTCCACCGTGCTCACCTA 60.541 55.000 0.00 0.00 0.00 3.08
2331 3956 1.194781 ATCTTCCACCGTGCTCACCT 61.195 55.000 0.00 0.00 0.00 4.00
2332 3957 1.021390 CATCTTCCACCGTGCTCACC 61.021 60.000 0.00 0.00 0.00 4.02
2333 3958 1.021390 CCATCTTCCACCGTGCTCAC 61.021 60.000 0.00 0.00 0.00 3.51
2339 3964 0.544357 TCTCCACCATCTTCCACCGT 60.544 55.000 0.00 0.00 0.00 4.83
2726 4353 2.932614 CGCACTTCCTGTATCCTTCTTG 59.067 50.000 0.00 0.00 0.00 3.02
2727 4354 2.678190 GCGCACTTCCTGTATCCTTCTT 60.678 50.000 0.30 0.00 0.00 2.52
2728 4355 1.134670 GCGCACTTCCTGTATCCTTCT 60.135 52.381 0.30 0.00 0.00 2.85
2729 4356 1.134670 AGCGCACTTCCTGTATCCTTC 60.135 52.381 11.47 0.00 0.00 3.46
2730 4357 0.905357 AGCGCACTTCCTGTATCCTT 59.095 50.000 11.47 0.00 0.00 3.36
2731 4358 0.176680 CAGCGCACTTCCTGTATCCT 59.823 55.000 11.47 0.00 0.00 3.24
2732 4359 0.175760 TCAGCGCACTTCCTGTATCC 59.824 55.000 11.47 0.00 0.00 2.59
2733 4360 1.281899 GTCAGCGCACTTCCTGTATC 58.718 55.000 11.47 0.00 0.00 2.24
2734 4361 0.608130 TGTCAGCGCACTTCCTGTAT 59.392 50.000 11.47 0.00 0.00 2.29
2735 4362 0.391228 TTGTCAGCGCACTTCCTGTA 59.609 50.000 11.47 0.00 0.00 2.74
2736 4363 1.146041 TTGTCAGCGCACTTCCTGT 59.854 52.632 11.47 0.00 0.00 4.00
2737 4364 1.571460 GTTGTCAGCGCACTTCCTG 59.429 57.895 11.47 0.00 0.00 3.86
2738 4365 1.956170 CGTTGTCAGCGCACTTCCT 60.956 57.895 11.47 0.00 0.00 3.36
2739 4366 2.551270 CGTTGTCAGCGCACTTCC 59.449 61.111 11.47 0.00 0.00 3.46
2746 4373 0.581529 TTTCAGAAGCGTTGTCAGCG 59.418 50.000 4.52 4.52 40.04 5.18
2747 4374 2.755836 TTTTCAGAAGCGTTGTCAGC 57.244 45.000 0.00 0.00 0.00 4.26
2748 4375 3.250762 TCCATTTTCAGAAGCGTTGTCAG 59.749 43.478 0.00 0.00 0.00 3.51
2749 4376 3.210227 TCCATTTTCAGAAGCGTTGTCA 58.790 40.909 0.00 0.00 0.00 3.58
2750 4377 3.896648 TCCATTTTCAGAAGCGTTGTC 57.103 42.857 0.00 0.00 0.00 3.18
2751 4378 3.820467 TCATCCATTTTCAGAAGCGTTGT 59.180 39.130 0.00 0.00 0.00 3.32
2752 4379 4.083110 AGTCATCCATTTTCAGAAGCGTTG 60.083 41.667 0.00 0.00 0.00 4.10
2753 4380 4.074970 AGTCATCCATTTTCAGAAGCGTT 58.925 39.130 0.00 0.00 0.00 4.84
2754 4381 3.679389 AGTCATCCATTTTCAGAAGCGT 58.321 40.909 0.00 0.00 0.00 5.07
2755 4382 4.272018 CCTAGTCATCCATTTTCAGAAGCG 59.728 45.833 0.00 0.00 0.00 4.68
2756 4383 4.036144 GCCTAGTCATCCATTTTCAGAAGC 59.964 45.833 0.00 0.00 0.00 3.86
2757 4384 5.435291 AGCCTAGTCATCCATTTTCAGAAG 58.565 41.667 0.00 0.00 0.00 2.85
2758 4385 5.441718 AGCCTAGTCATCCATTTTCAGAA 57.558 39.130 0.00 0.00 0.00 3.02
2759 4386 5.441718 AAGCCTAGTCATCCATTTTCAGA 57.558 39.130 0.00 0.00 0.00 3.27
2760 4387 5.235186 CGTAAGCCTAGTCATCCATTTTCAG 59.765 44.000 0.00 0.00 0.00 3.02
2761 4388 5.116180 CGTAAGCCTAGTCATCCATTTTCA 58.884 41.667 0.00 0.00 0.00 2.69
2762 4389 5.659048 CGTAAGCCTAGTCATCCATTTTC 57.341 43.478 0.00 0.00 0.00 2.29
2779 4406 7.027760 TGTTGTGTAGATCTCTAAAGCGTAAG 58.972 38.462 0.00 0.00 43.44 2.34
2780 4407 6.916440 TGTTGTGTAGATCTCTAAAGCGTAA 58.084 36.000 0.00 0.00 0.00 3.18
2781 4408 6.404403 CCTGTTGTGTAGATCTCTAAAGCGTA 60.404 42.308 0.00 0.00 0.00 4.42
2782 4409 5.386958 TGTTGTGTAGATCTCTAAAGCGT 57.613 39.130 0.00 0.00 0.00 5.07
2783 4410 4.800993 CCTGTTGTGTAGATCTCTAAAGCG 59.199 45.833 0.00 0.00 0.00 4.68
2784 4411 5.105310 TCCCTGTTGTGTAGATCTCTAAAGC 60.105 44.000 0.00 0.00 0.00 3.51
2785 4412 6.531503 TCCCTGTTGTGTAGATCTCTAAAG 57.468 41.667 0.00 0.00 0.00 1.85
2786 4413 6.574465 GCTTCCCTGTTGTGTAGATCTCTAAA 60.574 42.308 0.00 0.00 0.00 1.85
2787 4414 5.105310 GCTTCCCTGTTGTGTAGATCTCTAA 60.105 44.000 0.00 0.00 0.00 2.10
2788 4415 4.402793 GCTTCCCTGTTGTGTAGATCTCTA 59.597 45.833 0.00 0.00 0.00 2.43
2789 4416 3.196685 GCTTCCCTGTTGTGTAGATCTCT 59.803 47.826 0.00 0.00 0.00 3.10
2790 4417 3.526534 GCTTCCCTGTTGTGTAGATCTC 58.473 50.000 0.00 0.00 0.00 2.75
2791 4418 2.093973 CGCTTCCCTGTTGTGTAGATCT 60.094 50.000 0.00 0.00 0.00 2.75
2792 4419 2.271800 CGCTTCCCTGTTGTGTAGATC 58.728 52.381 0.00 0.00 0.00 2.75
2793 4420 1.066143 CCGCTTCCCTGTTGTGTAGAT 60.066 52.381 0.00 0.00 0.00 1.98
2794 4421 0.320374 CCGCTTCCCTGTTGTGTAGA 59.680 55.000 0.00 0.00 0.00 2.59
2795 4422 0.673644 CCCGCTTCCCTGTTGTGTAG 60.674 60.000 0.00 0.00 0.00 2.74
2796 4423 1.373435 CCCGCTTCCCTGTTGTGTA 59.627 57.895 0.00 0.00 0.00 2.90
2797 4424 2.113139 CCCGCTTCCCTGTTGTGT 59.887 61.111 0.00 0.00 0.00 3.72
2798 4425 1.528309 AACCCGCTTCCCTGTTGTG 60.528 57.895 0.00 0.00 0.00 3.33
2799 4426 1.528309 CAACCCGCTTCCCTGTTGT 60.528 57.895 0.00 0.00 34.76 3.32
2800 4427 0.821711 TTCAACCCGCTTCCCTGTTG 60.822 55.000 0.00 0.00 39.47 3.33
2801 4428 0.537371 CTTCAACCCGCTTCCCTGTT 60.537 55.000 0.00 0.00 0.00 3.16
2802 4429 1.073199 CTTCAACCCGCTTCCCTGT 59.927 57.895 0.00 0.00 0.00 4.00
2803 4430 0.035056 ATCTTCAACCCGCTTCCCTG 60.035 55.000 0.00 0.00 0.00 4.45
2804 4431 1.486726 CTATCTTCAACCCGCTTCCCT 59.513 52.381 0.00 0.00 0.00 4.20
2805 4432 1.475213 CCTATCTTCAACCCGCTTCCC 60.475 57.143 0.00 0.00 0.00 3.97
2806 4433 1.485066 TCCTATCTTCAACCCGCTTCC 59.515 52.381 0.00 0.00 0.00 3.46
2807 4434 2.981859 TCCTATCTTCAACCCGCTTC 57.018 50.000 0.00 0.00 0.00 3.86
2808 4435 3.344515 GTTTCCTATCTTCAACCCGCTT 58.655 45.455 0.00 0.00 0.00 4.68
2809 4436 2.355818 GGTTTCCTATCTTCAACCCGCT 60.356 50.000 0.00 0.00 33.77 5.52
2810 4437 2.014857 GGTTTCCTATCTTCAACCCGC 58.985 52.381 0.00 0.00 33.77 6.13
2811 4438 2.093869 TCGGTTTCCTATCTTCAACCCG 60.094 50.000 0.00 0.00 36.12 5.28
2812 4439 3.622166 TCGGTTTCCTATCTTCAACCC 57.378 47.619 0.00 0.00 36.12 4.11
2813 4440 5.183228 TGAATCGGTTTCCTATCTTCAACC 58.817 41.667 0.00 0.00 36.15 3.77
2814 4441 6.106673 TCTGAATCGGTTTCCTATCTTCAAC 58.893 40.000 0.00 0.00 33.04 3.18
2815 4442 6.294361 TCTGAATCGGTTTCCTATCTTCAA 57.706 37.500 0.00 0.00 33.04 2.69
2816 4443 5.932619 TCTGAATCGGTTTCCTATCTTCA 57.067 39.130 0.00 0.00 33.04 3.02
2817 4444 5.929415 GGATCTGAATCGGTTTCCTATCTTC 59.071 44.000 6.58 0.00 33.04 2.87
2818 4445 5.366768 TGGATCTGAATCGGTTTCCTATCTT 59.633 40.000 12.53 0.00 33.04 2.40
2819 4446 4.901849 TGGATCTGAATCGGTTTCCTATCT 59.098 41.667 12.53 0.00 33.04 1.98
2820 4447 5.215252 TGGATCTGAATCGGTTTCCTATC 57.785 43.478 12.53 1.97 33.04 2.08
2821 4448 4.503991 GCTGGATCTGAATCGGTTTCCTAT 60.504 45.833 12.53 0.00 33.04 2.57
2822 4449 3.181465 GCTGGATCTGAATCGGTTTCCTA 60.181 47.826 12.53 2.69 33.04 2.94
2823 4450 2.420687 GCTGGATCTGAATCGGTTTCCT 60.421 50.000 12.53 0.00 33.04 3.36
2824 4451 1.943340 GCTGGATCTGAATCGGTTTCC 59.057 52.381 6.80 6.80 33.04 3.13
2825 4452 1.594862 CGCTGGATCTGAATCGGTTTC 59.405 52.381 0.00 0.00 32.24 2.78
2826 4453 1.656652 CGCTGGATCTGAATCGGTTT 58.343 50.000 0.00 0.00 32.24 3.27
2827 4454 0.179073 CCGCTGGATCTGAATCGGTT 60.179 55.000 0.00 0.00 32.24 4.44
2828 4455 1.330655 ACCGCTGGATCTGAATCGGT 61.331 55.000 10.54 10.54 44.32 4.69
2829 4456 0.598680 GACCGCTGGATCTGAATCGG 60.599 60.000 1.50 9.57 42.24 4.18
2830 4457 0.598680 GGACCGCTGGATCTGAATCG 60.599 60.000 1.50 0.00 32.24 3.34
2831 4458 0.465705 TGGACCGCTGGATCTGAATC 59.534 55.000 1.50 0.00 0.00 2.52
2832 4459 0.911769 TTGGACCGCTGGATCTGAAT 59.088 50.000 1.50 0.00 0.00 2.57
2833 4460 0.690192 TTTGGACCGCTGGATCTGAA 59.310 50.000 1.50 0.00 0.00 3.02
2834 4461 0.250234 CTTTGGACCGCTGGATCTGA 59.750 55.000 1.50 0.00 0.00 3.27
2835 4462 0.250234 TCTTTGGACCGCTGGATCTG 59.750 55.000 1.50 0.00 0.00 2.90
2836 4463 1.207791 ATCTTTGGACCGCTGGATCT 58.792 50.000 1.50 0.00 0.00 2.75
2837 4464 1.672881 CAATCTTTGGACCGCTGGATC 59.327 52.381 1.50 0.00 0.00 3.36
2838 4465 1.281867 TCAATCTTTGGACCGCTGGAT 59.718 47.619 1.50 0.00 0.00 3.41
2839 4466 0.690192 TCAATCTTTGGACCGCTGGA 59.310 50.000 1.50 0.00 0.00 3.86
2840 4467 0.804989 GTCAATCTTTGGACCGCTGG 59.195 55.000 0.00 0.00 0.00 4.85
2841 4468 1.813513 AGTCAATCTTTGGACCGCTG 58.186 50.000 0.00 0.00 34.58 5.18
2842 4469 2.154462 CAAGTCAATCTTTGGACCGCT 58.846 47.619 0.00 0.00 34.58 5.52
2843 4470 2.151202 TCAAGTCAATCTTTGGACCGC 58.849 47.619 0.00 0.00 34.58 5.68
2844 4471 5.048782 TCAATTCAAGTCAATCTTTGGACCG 60.049 40.000 0.00 0.00 34.58 4.79
2845 4472 6.331369 TCAATTCAAGTCAATCTTTGGACC 57.669 37.500 0.00 0.00 34.58 4.46
2846 4473 6.865205 CCTTCAATTCAAGTCAATCTTTGGAC 59.135 38.462 0.00 0.00 33.63 4.02
2847 4474 6.777091 TCCTTCAATTCAAGTCAATCTTTGGA 59.223 34.615 0.00 0.00 33.63 3.53
2848 4475 6.985117 TCCTTCAATTCAAGTCAATCTTTGG 58.015 36.000 0.00 0.00 33.63 3.28
2849 4476 8.876275 TTTCCTTCAATTCAAGTCAATCTTTG 57.124 30.769 0.00 0.00 33.63 2.77
2850 4477 9.317936 GTTTTCCTTCAATTCAAGTCAATCTTT 57.682 29.630 0.00 0.00 33.63 2.52
2851 4478 8.699130 AGTTTTCCTTCAATTCAAGTCAATCTT 58.301 29.630 0.00 0.00 36.75 2.40
2852 4479 8.242729 AGTTTTCCTTCAATTCAAGTCAATCT 57.757 30.769 0.00 0.00 0.00 2.40
2853 4480 8.877808 AAGTTTTCCTTCAATTCAAGTCAATC 57.122 30.769 0.00 0.00 0.00 2.67
2854 4481 9.317936 GAAAGTTTTCCTTCAATTCAAGTCAAT 57.682 29.630 0.00 0.00 31.27 2.57
2855 4482 8.531146 AGAAAGTTTTCCTTCAATTCAAGTCAA 58.469 29.630 1.16 0.00 37.92 3.18
2856 4483 8.066612 AGAAAGTTTTCCTTCAATTCAAGTCA 57.933 30.769 1.16 0.00 37.92 3.41
2857 4484 8.932945 AAGAAAGTTTTCCTTCAATTCAAGTC 57.067 30.769 1.16 0.00 37.92 3.01
2858 4485 8.531146 TGAAGAAAGTTTTCCTTCAATTCAAGT 58.469 29.630 14.26 0.00 37.92 3.16
2859 4486 8.811378 GTGAAGAAAGTTTTCCTTCAATTCAAG 58.189 33.333 16.95 0.00 36.76 3.02
2860 4487 8.531146 AGTGAAGAAAGTTTTCCTTCAATTCAA 58.469 29.630 16.95 0.00 36.76 2.69
2861 4488 7.975616 CAGTGAAGAAAGTTTTCCTTCAATTCA 59.024 33.333 16.95 9.26 36.76 2.57
2862 4489 7.043125 GCAGTGAAGAAAGTTTTCCTTCAATTC 60.043 37.037 16.95 9.92 36.76 2.17
2863 4490 6.758416 GCAGTGAAGAAAGTTTTCCTTCAATT 59.242 34.615 16.95 9.13 36.76 2.32
2864 4491 6.276091 GCAGTGAAGAAAGTTTTCCTTCAAT 58.724 36.000 16.95 14.42 36.76 2.57
2865 4492 5.394115 GGCAGTGAAGAAAGTTTTCCTTCAA 60.394 40.000 16.95 4.28 36.76 2.69
2866 4493 4.097892 GGCAGTGAAGAAAGTTTTCCTTCA 59.902 41.667 13.13 13.13 37.92 3.02
2867 4494 4.097892 TGGCAGTGAAGAAAGTTTTCCTTC 59.902 41.667 9.17 9.17 37.92 3.46
2868 4495 4.023291 TGGCAGTGAAGAAAGTTTTCCTT 58.977 39.130 0.00 0.00 37.92 3.36
2869 4496 3.631250 TGGCAGTGAAGAAAGTTTTCCT 58.369 40.909 0.00 0.00 37.92 3.36
2870 4497 4.385358 TTGGCAGTGAAGAAAGTTTTCC 57.615 40.909 0.00 0.00 37.92 3.13
2871 4498 5.291858 CCTTTTGGCAGTGAAGAAAGTTTTC 59.708 40.000 0.00 0.00 37.45 2.29
2872 4499 5.178061 CCTTTTGGCAGTGAAGAAAGTTTT 58.822 37.500 0.00 0.00 0.00 2.43
2873 4500 4.222810 ACCTTTTGGCAGTGAAGAAAGTTT 59.777 37.500 0.00 0.00 45.59 2.66
2874 4501 3.769300 ACCTTTTGGCAGTGAAGAAAGTT 59.231 39.130 0.00 0.00 45.59 2.66
2875 4502 3.365472 ACCTTTTGGCAGTGAAGAAAGT 58.635 40.909 0.00 0.00 45.59 2.66
2876 4503 4.114794 CAACCTTTTGGCAGTGAAGAAAG 58.885 43.478 0.00 4.92 45.59 2.62
2877 4504 3.118811 CCAACCTTTTGGCAGTGAAGAAA 60.119 43.478 0.00 0.00 46.09 2.52
2878 4505 2.430332 CCAACCTTTTGGCAGTGAAGAA 59.570 45.455 0.00 0.00 46.09 2.52
2879 4506 2.031120 CCAACCTTTTGGCAGTGAAGA 58.969 47.619 0.00 0.00 46.09 2.87
2880 4507 2.514205 CCAACCTTTTGGCAGTGAAG 57.486 50.000 0.00 0.00 46.09 3.02
2888 4515 3.147200 CCTAAGGGAGCCAACCTTTTGG 61.147 54.545 9.17 6.38 45.81 3.28
2889 4516 2.171003 CCTAAGGGAGCCAACCTTTTG 58.829 52.381 9.17 1.66 45.81 2.44
2890 4517 2.604912 CCTAAGGGAGCCAACCTTTT 57.395 50.000 9.17 0.42 45.81 2.27
2903 4530 3.815401 GCACTATTGTACATGCCCTAAGG 59.185 47.826 7.77 0.00 31.71 2.69
2904 4531 4.708177 AGCACTATTGTACATGCCCTAAG 58.292 43.478 14.08 0.30 38.92 2.18
2905 4532 4.771114 AGCACTATTGTACATGCCCTAA 57.229 40.909 14.08 0.00 38.92 2.69
2906 4533 4.262463 GCTAGCACTATTGTACATGCCCTA 60.262 45.833 10.63 2.75 38.92 3.53
2907 4534 3.495100 GCTAGCACTATTGTACATGCCCT 60.495 47.826 10.63 1.79 38.92 5.19
2908 4535 2.808543 GCTAGCACTATTGTACATGCCC 59.191 50.000 10.63 2.09 38.92 5.36
2909 4536 3.733337 AGCTAGCACTATTGTACATGCC 58.267 45.455 18.83 1.71 38.92 4.40
2910 4537 6.646653 TCATAAGCTAGCACTATTGTACATGC 59.353 38.462 18.83 10.53 38.39 4.06
2911 4538 7.869937 ACTCATAAGCTAGCACTATTGTACATG 59.130 37.037 18.83 3.41 0.00 3.21
2912 4539 7.869937 CACTCATAAGCTAGCACTATTGTACAT 59.130 37.037 18.83 0.00 0.00 2.29
2913 4540 7.203218 CACTCATAAGCTAGCACTATTGTACA 58.797 38.462 18.83 0.00 0.00 2.90
2914 4541 6.144724 GCACTCATAAGCTAGCACTATTGTAC 59.855 42.308 18.83 6.02 0.00 2.90
2915 4542 6.216569 GCACTCATAAGCTAGCACTATTGTA 58.783 40.000 18.83 0.00 0.00 2.41
2916 4543 5.053145 GCACTCATAAGCTAGCACTATTGT 58.947 41.667 18.83 10.83 0.00 2.71
2917 4544 4.450419 GGCACTCATAAGCTAGCACTATTG 59.550 45.833 18.83 9.45 0.00 1.90
2918 4545 4.101585 TGGCACTCATAAGCTAGCACTATT 59.898 41.667 18.83 4.74 0.00 1.73
2919 4546 3.643320 TGGCACTCATAAGCTAGCACTAT 59.357 43.478 18.83 10.35 0.00 2.12
2920 4547 3.031013 TGGCACTCATAAGCTAGCACTA 58.969 45.455 18.83 8.28 0.00 2.74
2921 4548 1.833630 TGGCACTCATAAGCTAGCACT 59.166 47.619 18.83 6.00 0.00 4.40
2922 4549 2.315925 TGGCACTCATAAGCTAGCAC 57.684 50.000 18.83 0.00 0.00 4.40
2923 4550 2.171237 ACATGGCACTCATAAGCTAGCA 59.829 45.455 18.83 0.00 34.12 3.49
2924 4551 2.843701 ACATGGCACTCATAAGCTAGC 58.156 47.619 6.62 6.62 34.12 3.42
2925 4552 4.281941 TCCTACATGGCACTCATAAGCTAG 59.718 45.833 0.00 0.00 34.12 3.42
2926 4553 4.223144 TCCTACATGGCACTCATAAGCTA 58.777 43.478 0.00 0.00 34.12 3.32
2927 4554 3.041211 TCCTACATGGCACTCATAAGCT 58.959 45.455 0.00 0.00 34.12 3.74
2928 4555 3.475566 TCCTACATGGCACTCATAAGC 57.524 47.619 0.00 0.00 34.12 3.09
2929 4556 9.725019 TTATTTATCCTACATGGCACTCATAAG 57.275 33.333 0.00 0.00 34.12 1.73
2931 4558 9.671279 CATTATTTATCCTACATGGCACTCATA 57.329 33.333 0.00 0.00 34.12 2.15
2932 4559 8.385491 TCATTATTTATCCTACATGGCACTCAT 58.615 33.333 0.00 0.00 36.31 2.90
2933 4560 7.744733 TCATTATTTATCCTACATGGCACTCA 58.255 34.615 0.00 0.00 35.26 3.41
2934 4561 7.335422 CCTCATTATTTATCCTACATGGCACTC 59.665 40.741 0.00 0.00 35.26 3.51
2935 4562 7.170965 CCTCATTATTTATCCTACATGGCACT 58.829 38.462 0.00 0.00 35.26 4.40
2936 4563 6.942576 ACCTCATTATTTATCCTACATGGCAC 59.057 38.462 0.00 0.00 35.26 5.01
2937 4564 6.942005 CACCTCATTATTTATCCTACATGGCA 59.058 38.462 0.00 0.00 35.26 4.92
2938 4565 6.375455 CCACCTCATTATTTATCCTACATGGC 59.625 42.308 0.00 0.00 35.26 4.40
2939 4566 7.689299 TCCACCTCATTATTTATCCTACATGG 58.311 38.462 0.00 0.00 37.10 3.66
2940 4567 7.826252 CCTCCACCTCATTATTTATCCTACATG 59.174 40.741 0.00 0.00 0.00 3.21
2941 4568 7.739444 TCCTCCACCTCATTATTTATCCTACAT 59.261 37.037 0.00 0.00 0.00 2.29
2942 4569 7.079700 TCCTCCACCTCATTATTTATCCTACA 58.920 38.462 0.00 0.00 0.00 2.74
2943 4570 7.455008 TCTCCTCCACCTCATTATTTATCCTAC 59.545 40.741 0.00 0.00 0.00 3.18
2944 4571 7.544650 TCTCCTCCACCTCATTATTTATCCTA 58.455 38.462 0.00 0.00 0.00 2.94
2945 4572 6.393897 TCTCCTCCACCTCATTATTTATCCT 58.606 40.000 0.00 0.00 0.00 3.24
2946 4573 6.498651 TCTCTCCTCCACCTCATTATTTATCC 59.501 42.308 0.00 0.00 0.00 2.59
2947 4574 7.453126 TCTCTCTCCTCCACCTCATTATTTATC 59.547 40.741 0.00 0.00 0.00 1.75
2948 4575 7.309091 TCTCTCTCCTCCACCTCATTATTTAT 58.691 38.462 0.00 0.00 0.00 1.40
2949 4576 6.683537 TCTCTCTCCTCCACCTCATTATTTA 58.316 40.000 0.00 0.00 0.00 1.40
2950 4577 5.533112 TCTCTCTCCTCCACCTCATTATTT 58.467 41.667 0.00 0.00 0.00 1.40
2951 4578 5.149584 TCTCTCTCCTCCACCTCATTATT 57.850 43.478 0.00 0.00 0.00 1.40
2952 4579 4.823364 TCTCTCTCCTCCACCTCATTAT 57.177 45.455 0.00 0.00 0.00 1.28
2953 4580 4.017037 AGTTCTCTCTCCTCCACCTCATTA 60.017 45.833 0.00 0.00 0.00 1.90
2954 4581 3.103742 GTTCTCTCTCCTCCACCTCATT 58.896 50.000 0.00 0.00 0.00 2.57
2955 4582 2.314549 AGTTCTCTCTCCTCCACCTCAT 59.685 50.000 0.00 0.00 0.00 2.90
2956 4583 1.713647 AGTTCTCTCTCCTCCACCTCA 59.286 52.381 0.00 0.00 0.00 3.86
2957 4584 2.525105 AGTTCTCTCTCCTCCACCTC 57.475 55.000 0.00 0.00 0.00 3.85
2958 4585 4.618378 ATTAGTTCTCTCTCCTCCACCT 57.382 45.455 0.00 0.00 0.00 4.00
2959 4586 6.130569 TCTTATTAGTTCTCTCTCCTCCACC 58.869 44.000 0.00 0.00 0.00 4.61
2960 4587 7.648039 TTCTTATTAGTTCTCTCTCCTCCAC 57.352 40.000 0.00 0.00 0.00 4.02
2961 4588 8.666129 TTTTCTTATTAGTTCTCTCTCCTCCA 57.334 34.615 0.00 0.00 0.00 3.86
2962 4589 8.201464 CCTTTTCTTATTAGTTCTCTCTCCTCC 58.799 40.741 0.00 0.00 0.00 4.30
2963 4590 7.709182 GCCTTTTCTTATTAGTTCTCTCTCCTC 59.291 40.741 0.00 0.00 0.00 3.71
2964 4591 7.401782 AGCCTTTTCTTATTAGTTCTCTCTCCT 59.598 37.037 0.00 0.00 0.00 3.69
2965 4592 7.561251 AGCCTTTTCTTATTAGTTCTCTCTCC 58.439 38.462 0.00 0.00 0.00 3.71
2966 4593 8.878769 CAAGCCTTTTCTTATTAGTTCTCTCTC 58.121 37.037 0.00 0.00 0.00 3.20
2967 4594 8.379331 ACAAGCCTTTTCTTATTAGTTCTCTCT 58.621 33.333 0.00 0.00 0.00 3.10
2968 4595 8.554835 ACAAGCCTTTTCTTATTAGTTCTCTC 57.445 34.615 0.00 0.00 0.00 3.20
2969 4596 8.379331 AGACAAGCCTTTTCTTATTAGTTCTCT 58.621 33.333 0.00 0.00 0.00 3.10
2970 4597 8.554835 AGACAAGCCTTTTCTTATTAGTTCTC 57.445 34.615 0.00 0.00 0.00 2.87
2971 4598 8.926092 AAGACAAGCCTTTTCTTATTAGTTCT 57.074 30.769 4.07 0.00 0.00 3.01
2972 4599 9.004717 AGAAGACAAGCCTTTTCTTATTAGTTC 57.995 33.333 5.86 0.00 29.54 3.01
2973 4600 8.926092 AGAAGACAAGCCTTTTCTTATTAGTT 57.074 30.769 5.86 0.00 29.54 2.24
2974 4601 8.379331 AGAGAAGACAAGCCTTTTCTTATTAGT 58.621 33.333 5.86 0.00 35.01 2.24
2975 4602 8.785329 AGAGAAGACAAGCCTTTTCTTATTAG 57.215 34.615 5.86 0.00 35.01 1.73
2977 4604 9.746457 ATAAGAGAAGACAAGCCTTTTCTTATT 57.254 29.630 16.82 4.99 46.77 1.40
2979 4606 9.574516 AAATAAGAGAAGACAAGCCTTTTCTTA 57.425 29.630 5.86 14.67 45.53 2.10
2980 4607 8.470657 AAATAAGAGAAGACAAGCCTTTTCTT 57.529 30.769 5.57 5.57 44.56 2.52
2981 4608 9.574516 TTAAATAAGAGAAGACAAGCCTTTTCT 57.425 29.630 0.00 0.00 38.69 2.52
2982 4609 9.833182 CTTAAATAAGAGAAGACAAGCCTTTTC 57.167 33.333 0.00 0.00 35.33 2.29
2983 4610 9.574516 TCTTAAATAAGAGAAGACAAGCCTTTT 57.425 29.630 0.00 0.00 37.40 2.27
2984 4611 9.746457 ATCTTAAATAAGAGAAGACAAGCCTTT 57.254 29.630 8.68 0.00 44.67 3.11


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.