Multiple sequence alignment - TraesCS7B01G338100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G338100 chr7B 100.000 2246 0 0 1 2246 592615688 592617933 0.000000e+00 4148.0
1 TraesCS7B01G338100 chr7B 95.258 1413 51 10 843 2246 662755533 662754128 0.000000e+00 2224.0
2 TraesCS7B01G338100 chr7B 96.859 191 5 1 603 793 662755798 662755609 3.600000e-83 318.0
3 TraesCS7B01G338100 chr7B 92.857 42 3 0 558 599 81409909 81409950 6.700000e-06 62.1
4 TraesCS7B01G338100 chr7B 92.857 42 3 0 558 599 81410966 81411007 6.700000e-06 62.1
5 TraesCS7B01G338100 chr7B 92.857 42 3 0 558 599 81412553 81412594 6.700000e-06 62.1
6 TraesCS7B01G338100 chr3A 95.538 1412 48 9 843 2246 105557456 105556052 0.000000e+00 2244.0
7 TraesCS7B01G338100 chr3A 93.151 219 13 2 601 818 673485746 673485963 1.000000e-83 320.0
8 TraesCS7B01G338100 chr3A 92.683 41 3 0 558 598 589834394 589834434 2.410000e-05 60.2
9 TraesCS7B01G338100 chr5D 95.448 1406 49 8 843 2240 299973006 299971608 0.000000e+00 2228.0
10 TraesCS7B01G338100 chr5D 95.113 1412 52 10 843 2246 6253773 6252371 0.000000e+00 2209.0
11 TraesCS7B01G338100 chr5D 95.174 1409 50 12 843 2246 503313009 503314404 0.000000e+00 2209.0
12 TraesCS7B01G338100 chr5D 94.834 1413 54 12 843 2246 503338942 503340344 0.000000e+00 2187.0
13 TraesCS7B01G338100 chr5D 96.373 193 6 1 601 793 299973277 299973086 1.290000e-82 316.0
14 TraesCS7B01G338100 chr5D 96.373 193 6 1 601 793 481596991 481597182 1.290000e-82 316.0
15 TraesCS7B01G338100 chr1B 95.252 1411 53 8 843 2246 633716473 633717876 0.000000e+00 2222.0
16 TraesCS7B01G338100 chr5B 95.050 1414 53 11 843 2246 57515624 57514218 0.000000e+00 2207.0
17 TraesCS7B01G338100 chr5B 96.373 193 6 1 601 793 57515891 57515700 1.290000e-82 316.0
18 TraesCS7B01G338100 chrUn 94.890 1409 58 9 843 2246 261569191 261567792 0.000000e+00 2191.0
19 TraesCS7B01G338100 chrUn 96.373 193 6 1 601 793 423338100 423337909 1.290000e-82 316.0
20 TraesCS7B01G338100 chr6D 91.489 235 19 1 365 598 426279553 426279319 2.780000e-84 322.0
21 TraesCS7B01G338100 chr6D 94.118 85 5 0 381 465 426279686 426279602 1.810000e-26 130.0
22 TraesCS7B01G338100 chr7D 95.522 201 7 2 603 803 614768648 614768846 1.000000e-83 320.0
23 TraesCS7B01G338100 chr7D 95.477 199 7 2 601 799 614829561 614829757 1.290000e-82 316.0
24 TraesCS7B01G338100 chr1A 96.373 193 6 1 601 793 554481492 554481683 1.290000e-82 316.0
25 TraesCS7B01G338100 chr1A 97.368 38 1 0 566 603 94244929 94244966 5.180000e-07 65.8
26 TraesCS7B01G338100 chr3B 90.558 233 22 0 366 598 794977551 794977319 2.170000e-80 309.0
27 TraesCS7B01G338100 chr2A 86.869 99 13 0 503 601 120031748 120031650 6.560000e-21 111.0
28 TraesCS7B01G338100 chr6A 92.683 41 3 0 558 598 603076004 603076044 2.410000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G338100 chr7B 592615688 592617933 2245 False 4148.0 4148 100.0000 1 2246 1 chr7B.!!$F1 2245
1 TraesCS7B01G338100 chr7B 662754128 662755798 1670 True 1271.0 2224 96.0585 603 2246 2 chr7B.!!$R1 1643
2 TraesCS7B01G338100 chr3A 105556052 105557456 1404 True 2244.0 2244 95.5380 843 2246 1 chr3A.!!$R1 1403
3 TraesCS7B01G338100 chr5D 6252371 6253773 1402 True 2209.0 2209 95.1130 843 2246 1 chr5D.!!$R1 1403
4 TraesCS7B01G338100 chr5D 503313009 503314404 1395 False 2209.0 2209 95.1740 843 2246 1 chr5D.!!$F2 1403
5 TraesCS7B01G338100 chr5D 503338942 503340344 1402 False 2187.0 2187 94.8340 843 2246 1 chr5D.!!$F3 1403
6 TraesCS7B01G338100 chr5D 299971608 299973277 1669 True 1272.0 2228 95.9105 601 2240 2 chr5D.!!$R2 1639
7 TraesCS7B01G338100 chr1B 633716473 633717876 1403 False 2222.0 2222 95.2520 843 2246 1 chr1B.!!$F1 1403
8 TraesCS7B01G338100 chr5B 57514218 57515891 1673 True 1261.5 2207 95.7115 601 2246 2 chr5B.!!$R1 1645
9 TraesCS7B01G338100 chrUn 261567792 261569191 1399 True 2191.0 2191 94.8900 843 2246 1 chrUn.!!$R1 1403

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
445 446 0.033642 GACCTATAGCGTTGGGCCTC 59.966 60.0 4.53 0.0 45.17 4.7 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1390 1425 5.046591 CGCTTCCTAGAATGGGGTATTATCA 60.047 44.0 0.0 0.0 37.33 2.15 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 8.600449 TCCAAATGAATTTGTGATGTAAAACC 57.400 30.769 13.28 0.00 44.21 3.27
34 35 8.428063 TCCAAATGAATTTGTGATGTAAAACCT 58.572 29.630 13.28 0.00 44.21 3.50
35 36 8.497554 CCAAATGAATTTGTGATGTAAAACCTG 58.502 33.333 13.28 0.00 44.21 4.00
36 37 9.258826 CAAATGAATTTGTGATGTAAAACCTGA 57.741 29.630 7.47 0.00 41.58 3.86
38 39 8.991243 ATGAATTTGTGATGTAAAACCTGATG 57.009 30.769 0.00 0.00 0.00 3.07
39 40 7.950512 TGAATTTGTGATGTAAAACCTGATGT 58.049 30.769 0.00 0.00 0.00 3.06
40 41 9.072375 TGAATTTGTGATGTAAAACCTGATGTA 57.928 29.630 0.00 0.00 0.00 2.29
41 42 9.906660 GAATTTGTGATGTAAAACCTGATGTAA 57.093 29.630 0.00 0.00 0.00 2.41
45 46 9.689976 TTGTGATGTAAAACCTGATGTAATTTG 57.310 29.630 0.00 0.00 0.00 2.32
46 47 7.812191 TGTGATGTAAAACCTGATGTAATTTGC 59.188 33.333 0.00 0.00 0.00 3.68
47 48 8.028938 GTGATGTAAAACCTGATGTAATTTGCT 58.971 33.333 0.00 0.00 0.00 3.91
48 49 8.584157 TGATGTAAAACCTGATGTAATTTGCTT 58.416 29.630 0.00 0.00 0.00 3.91
49 50 8.761575 ATGTAAAACCTGATGTAATTTGCTTG 57.238 30.769 0.00 0.00 0.00 4.01
50 51 6.644592 TGTAAAACCTGATGTAATTTGCTTGC 59.355 34.615 0.00 0.00 0.00 4.01
51 52 4.870123 AACCTGATGTAATTTGCTTGCA 57.130 36.364 0.00 0.00 33.77 4.08
52 53 4.870123 ACCTGATGTAATTTGCTTGCAA 57.130 36.364 3.70 3.70 32.93 4.08
53 54 5.410355 ACCTGATGTAATTTGCTTGCAAT 57.590 34.783 8.93 0.00 32.93 3.56
54 55 5.172934 ACCTGATGTAATTTGCTTGCAATG 58.827 37.500 8.93 0.00 32.93 2.82
55 56 4.033587 CCTGATGTAATTTGCTTGCAATGC 59.966 41.667 8.93 6.77 32.93 3.56
56 57 4.566987 TGATGTAATTTGCTTGCAATGCA 58.433 34.783 16.36 16.36 45.98 3.96
62 63 2.723231 TGCTTGCAATGCAGTCTGT 58.277 47.368 16.36 0.00 42.52 3.41
63 64 0.312729 TGCTTGCAATGCAGTCTGTG 59.687 50.000 16.36 0.00 42.52 3.66
64 65 0.313043 GCTTGCAATGCAGTCTGTGT 59.687 50.000 8.31 0.00 40.61 3.72
65 66 1.536766 GCTTGCAATGCAGTCTGTGTA 59.463 47.619 8.31 0.00 40.61 2.90
66 67 2.666619 GCTTGCAATGCAGTCTGTGTAC 60.667 50.000 8.31 0.00 40.61 2.90
67 68 2.549064 TGCAATGCAGTCTGTGTACT 57.451 45.000 2.72 0.00 33.32 2.73
68 69 2.416747 TGCAATGCAGTCTGTGTACTC 58.583 47.619 2.72 0.00 33.32 2.59
69 70 1.734465 GCAATGCAGTCTGTGTACTCC 59.266 52.381 0.00 0.00 0.00 3.85
70 71 2.871637 GCAATGCAGTCTGTGTACTCCA 60.872 50.000 0.00 0.00 0.00 3.86
71 72 3.603532 CAATGCAGTCTGTGTACTCCAT 58.396 45.455 0.93 0.00 28.80 3.41
72 73 3.988976 ATGCAGTCTGTGTACTCCATT 57.011 42.857 0.93 0.00 21.95 3.16
73 74 3.769739 TGCAGTCTGTGTACTCCATTT 57.230 42.857 0.93 0.00 0.00 2.32
74 75 3.402110 TGCAGTCTGTGTACTCCATTTG 58.598 45.455 0.93 0.00 0.00 2.32
75 76 2.160417 GCAGTCTGTGTACTCCATTTGC 59.840 50.000 0.93 0.00 0.00 3.68
76 77 2.744202 CAGTCTGTGTACTCCATTTGCC 59.256 50.000 0.00 0.00 0.00 4.52
77 78 2.371841 AGTCTGTGTACTCCATTTGCCA 59.628 45.455 0.00 0.00 0.00 4.92
78 79 3.009473 AGTCTGTGTACTCCATTTGCCAT 59.991 43.478 0.00 0.00 0.00 4.40
79 80 3.375299 GTCTGTGTACTCCATTTGCCATC 59.625 47.826 0.00 0.00 0.00 3.51
80 81 3.264193 TCTGTGTACTCCATTTGCCATCT 59.736 43.478 0.00 0.00 0.00 2.90
81 82 4.012374 CTGTGTACTCCATTTGCCATCTT 58.988 43.478 0.00 0.00 0.00 2.40
82 83 4.009675 TGTGTACTCCATTTGCCATCTTC 58.990 43.478 0.00 0.00 0.00 2.87
83 84 3.063997 GTGTACTCCATTTGCCATCTTCG 59.936 47.826 0.00 0.00 0.00 3.79
84 85 1.755179 ACTCCATTTGCCATCTTCGG 58.245 50.000 0.00 0.00 0.00 4.30
85 86 1.004745 ACTCCATTTGCCATCTTCGGT 59.995 47.619 0.00 0.00 0.00 4.69
86 87 2.094675 CTCCATTTGCCATCTTCGGTT 58.905 47.619 0.00 0.00 0.00 4.44
87 88 3.278574 CTCCATTTGCCATCTTCGGTTA 58.721 45.455 0.00 0.00 0.00 2.85
88 89 3.885297 CTCCATTTGCCATCTTCGGTTAT 59.115 43.478 0.00 0.00 0.00 1.89
89 90 4.277476 TCCATTTGCCATCTTCGGTTATT 58.723 39.130 0.00 0.00 0.00 1.40
90 91 4.097741 TCCATTTGCCATCTTCGGTTATTG 59.902 41.667 0.00 0.00 0.00 1.90
91 92 3.502191 TTTGCCATCTTCGGTTATTGC 57.498 42.857 0.00 0.00 0.00 3.56
92 93 2.418368 TGCCATCTTCGGTTATTGCT 57.582 45.000 0.00 0.00 0.00 3.91
93 94 2.016318 TGCCATCTTCGGTTATTGCTG 58.984 47.619 0.00 0.00 0.00 4.41
94 95 2.017049 GCCATCTTCGGTTATTGCTGT 58.983 47.619 0.00 0.00 0.00 4.40
95 96 2.423538 GCCATCTTCGGTTATTGCTGTT 59.576 45.455 0.00 0.00 0.00 3.16
96 97 3.487544 GCCATCTTCGGTTATTGCTGTTC 60.488 47.826 0.00 0.00 0.00 3.18
97 98 3.242413 CCATCTTCGGTTATTGCTGTTCG 60.242 47.826 0.00 0.00 0.00 3.95
98 99 1.730064 TCTTCGGTTATTGCTGTTCGC 59.270 47.619 0.00 0.00 39.77 4.70
99 100 0.800012 TTCGGTTATTGCTGTTCGCC 59.200 50.000 0.00 0.00 38.05 5.54
100 101 0.320858 TCGGTTATTGCTGTTCGCCA 60.321 50.000 0.00 0.00 38.05 5.69
101 102 0.519519 CGGTTATTGCTGTTCGCCAA 59.480 50.000 0.00 0.00 38.05 4.52
102 103 1.068885 CGGTTATTGCTGTTCGCCAAA 60.069 47.619 0.00 0.00 38.05 3.28
103 104 2.324860 GGTTATTGCTGTTCGCCAAAC 58.675 47.619 0.00 0.00 38.05 2.93
104 105 2.287909 GGTTATTGCTGTTCGCCAAACA 60.288 45.455 0.00 0.00 45.60 2.83
105 106 3.574614 GTTATTGCTGTTCGCCAAACAT 58.425 40.909 0.22 0.00 46.53 2.71
106 107 4.380023 GGTTATTGCTGTTCGCCAAACATA 60.380 41.667 0.22 0.00 46.53 2.29
107 108 3.932545 ATTGCTGTTCGCCAAACATAA 57.067 38.095 0.22 0.99 46.53 1.90
108 109 3.717400 TTGCTGTTCGCCAAACATAAA 57.283 38.095 0.22 0.00 46.53 1.40
109 110 3.717400 TGCTGTTCGCCAAACATAAAA 57.283 38.095 0.22 0.00 46.53 1.52
110 111 4.046938 TGCTGTTCGCCAAACATAAAAA 57.953 36.364 0.22 0.00 46.53 1.94
130 131 5.956068 AAAATGAGAAGTTTGAGAGAGCC 57.044 39.130 0.00 0.00 0.00 4.70
131 132 4.906747 AATGAGAAGTTTGAGAGAGCCT 57.093 40.909 0.00 0.00 0.00 4.58
132 133 3.674528 TGAGAAGTTTGAGAGAGCCTG 57.325 47.619 0.00 0.00 0.00 4.85
133 134 2.968574 TGAGAAGTTTGAGAGAGCCTGT 59.031 45.455 0.00 0.00 0.00 4.00
134 135 3.389329 TGAGAAGTTTGAGAGAGCCTGTT 59.611 43.478 0.00 0.00 0.00 3.16
135 136 3.737850 AGAAGTTTGAGAGAGCCTGTTG 58.262 45.455 0.00 0.00 0.00 3.33
136 137 3.389329 AGAAGTTTGAGAGAGCCTGTTGA 59.611 43.478 0.00 0.00 0.00 3.18
137 138 3.399440 AGTTTGAGAGAGCCTGTTGAG 57.601 47.619 0.00 0.00 0.00 3.02
138 139 2.703007 AGTTTGAGAGAGCCTGTTGAGT 59.297 45.455 0.00 0.00 0.00 3.41
139 140 3.898123 AGTTTGAGAGAGCCTGTTGAGTA 59.102 43.478 0.00 0.00 0.00 2.59
140 141 4.021544 AGTTTGAGAGAGCCTGTTGAGTAG 60.022 45.833 0.00 0.00 0.00 2.57
141 142 2.451490 TGAGAGAGCCTGTTGAGTAGG 58.549 52.381 0.00 0.00 38.39 3.18
142 143 2.225142 TGAGAGAGCCTGTTGAGTAGGT 60.225 50.000 0.00 0.00 37.64 3.08
143 144 2.165437 GAGAGAGCCTGTTGAGTAGGTG 59.835 54.545 0.00 0.00 37.64 4.00
144 145 1.896465 GAGAGCCTGTTGAGTAGGTGT 59.104 52.381 0.00 0.00 37.64 4.16
145 146 2.300437 GAGAGCCTGTTGAGTAGGTGTT 59.700 50.000 0.00 0.00 37.64 3.32
146 147 2.037772 AGAGCCTGTTGAGTAGGTGTTG 59.962 50.000 0.00 0.00 37.64 3.33
147 148 1.768870 AGCCTGTTGAGTAGGTGTTGT 59.231 47.619 0.00 0.00 37.64 3.32
148 149 2.172717 AGCCTGTTGAGTAGGTGTTGTT 59.827 45.455 0.00 0.00 37.64 2.83
149 150 2.548480 GCCTGTTGAGTAGGTGTTGTTC 59.452 50.000 0.00 0.00 37.64 3.18
150 151 3.744530 GCCTGTTGAGTAGGTGTTGTTCT 60.745 47.826 0.00 0.00 37.64 3.01
151 152 3.809832 CCTGTTGAGTAGGTGTTGTTCTG 59.190 47.826 0.00 0.00 0.00 3.02
152 153 3.804036 TGTTGAGTAGGTGTTGTTCTGG 58.196 45.455 0.00 0.00 0.00 3.86
153 154 3.452990 TGTTGAGTAGGTGTTGTTCTGGA 59.547 43.478 0.00 0.00 0.00 3.86
154 155 3.746045 TGAGTAGGTGTTGTTCTGGAC 57.254 47.619 0.00 0.00 0.00 4.02
155 156 3.035363 TGAGTAGGTGTTGTTCTGGACA 58.965 45.455 0.00 0.00 36.19 4.02
156 157 3.069586 TGAGTAGGTGTTGTTCTGGACAG 59.930 47.826 0.00 0.00 39.94 3.51
157 158 2.368875 AGTAGGTGTTGTTCTGGACAGG 59.631 50.000 0.00 0.00 39.94 4.00
158 159 0.474184 AGGTGTTGTTCTGGACAGGG 59.526 55.000 0.00 0.00 39.94 4.45
159 160 0.182775 GGTGTTGTTCTGGACAGGGT 59.817 55.000 0.00 0.00 39.94 4.34
160 161 1.418637 GGTGTTGTTCTGGACAGGGTA 59.581 52.381 0.00 0.00 39.94 3.69
161 162 2.550208 GGTGTTGTTCTGGACAGGGTAG 60.550 54.545 0.00 0.00 39.94 3.18
162 163 1.697432 TGTTGTTCTGGACAGGGTAGG 59.303 52.381 0.00 0.00 39.94 3.18
163 164 1.975680 GTTGTTCTGGACAGGGTAGGA 59.024 52.381 0.00 0.00 39.94 2.94
164 165 2.572104 GTTGTTCTGGACAGGGTAGGAT 59.428 50.000 0.00 0.00 39.94 3.24
165 166 3.769189 TGTTCTGGACAGGGTAGGATA 57.231 47.619 0.00 0.00 33.40 2.59
166 167 4.069312 TGTTCTGGACAGGGTAGGATAA 57.931 45.455 0.00 0.00 33.40 1.75
167 168 4.431378 TGTTCTGGACAGGGTAGGATAAA 58.569 43.478 0.00 0.00 33.40 1.40
168 169 5.036916 TGTTCTGGACAGGGTAGGATAAAT 58.963 41.667 0.00 0.00 33.40 1.40
169 170 5.104527 TGTTCTGGACAGGGTAGGATAAATG 60.105 44.000 0.00 0.00 33.40 2.32
170 171 3.391296 TCTGGACAGGGTAGGATAAATGC 59.609 47.826 0.00 0.00 0.00 3.56
171 172 3.119319 TGGACAGGGTAGGATAAATGCA 58.881 45.455 0.00 0.00 0.00 3.96
172 173 3.721575 TGGACAGGGTAGGATAAATGCAT 59.278 43.478 0.00 0.00 0.00 3.96
173 174 4.167892 TGGACAGGGTAGGATAAATGCATT 59.832 41.667 5.99 5.99 0.00 3.56
174 175 4.520492 GGACAGGGTAGGATAAATGCATTG 59.480 45.833 13.82 0.00 0.00 2.82
175 176 3.891366 ACAGGGTAGGATAAATGCATTGC 59.109 43.478 13.82 0.46 0.00 3.56
176 177 3.890756 CAGGGTAGGATAAATGCATTGCA 59.109 43.478 13.82 14.72 44.86 4.08
177 178 3.891366 AGGGTAGGATAAATGCATTGCAC 59.109 43.478 14.66 7.04 43.04 4.57
178 179 3.636300 GGGTAGGATAAATGCATTGCACA 59.364 43.478 14.66 2.57 43.04 4.57
179 180 4.099266 GGGTAGGATAAATGCATTGCACAA 59.901 41.667 14.66 2.57 43.04 3.33
180 181 5.221501 GGGTAGGATAAATGCATTGCACAAT 60.222 40.000 14.66 7.65 43.04 2.71
196 197 4.797471 GCACAATGAAACATAAGTGCTGA 58.203 39.130 22.50 0.00 46.31 4.26
197 198 5.404946 GCACAATGAAACATAAGTGCTGAT 58.595 37.500 22.50 0.00 46.31 2.90
198 199 5.287752 GCACAATGAAACATAAGTGCTGATG 59.712 40.000 22.50 0.00 46.31 3.07
199 200 6.614160 CACAATGAAACATAAGTGCTGATGA 58.386 36.000 3.66 0.00 0.00 2.92
200 201 6.745907 CACAATGAAACATAAGTGCTGATGAG 59.254 38.462 3.66 0.00 0.00 2.90
201 202 6.432162 ACAATGAAACATAAGTGCTGATGAGT 59.568 34.615 3.66 0.00 0.00 3.41
202 203 7.040201 ACAATGAAACATAAGTGCTGATGAGTT 60.040 33.333 3.66 0.00 0.00 3.01
203 204 8.453320 CAATGAAACATAAGTGCTGATGAGTTA 58.547 33.333 3.66 0.00 0.00 2.24
204 205 7.601073 TGAAACATAAGTGCTGATGAGTTAG 57.399 36.000 3.66 0.00 0.00 2.34
205 206 6.595326 TGAAACATAAGTGCTGATGAGTTAGG 59.405 38.462 3.66 0.00 0.00 2.69
206 207 5.939764 ACATAAGTGCTGATGAGTTAGGA 57.060 39.130 3.66 0.00 0.00 2.94
207 208 6.299805 ACATAAGTGCTGATGAGTTAGGAA 57.700 37.500 3.66 0.00 0.00 3.36
208 209 6.344500 ACATAAGTGCTGATGAGTTAGGAAG 58.656 40.000 3.66 0.00 0.00 3.46
209 210 3.258971 AGTGCTGATGAGTTAGGAAGC 57.741 47.619 0.00 0.00 0.00 3.86
210 211 2.093235 AGTGCTGATGAGTTAGGAAGCC 60.093 50.000 0.00 0.00 0.00 4.35
211 212 1.210478 TGCTGATGAGTTAGGAAGCCC 59.790 52.381 0.00 0.00 0.00 5.19
212 213 1.210478 GCTGATGAGTTAGGAAGCCCA 59.790 52.381 0.00 0.00 33.88 5.36
213 214 2.744494 GCTGATGAGTTAGGAAGCCCAG 60.744 54.545 0.00 0.00 33.88 4.45
214 215 1.210478 TGATGAGTTAGGAAGCCCAGC 59.790 52.381 0.00 0.00 33.88 4.85
215 216 1.488393 GATGAGTTAGGAAGCCCAGCT 59.512 52.381 0.00 0.00 42.56 4.24
216 217 0.615331 TGAGTTAGGAAGCCCAGCTG 59.385 55.000 6.78 6.78 39.62 4.24
217 218 0.615850 GAGTTAGGAAGCCCAGCTGT 59.384 55.000 13.81 0.00 39.62 4.40
218 219 0.326264 AGTTAGGAAGCCCAGCTGTG 59.674 55.000 13.81 1.33 39.62 3.66
219 220 0.036875 GTTAGGAAGCCCAGCTGTGT 59.963 55.000 13.81 0.00 39.62 3.72
220 221 0.771127 TTAGGAAGCCCAGCTGTGTT 59.229 50.000 13.81 2.35 39.62 3.32
221 222 0.324943 TAGGAAGCCCAGCTGTGTTC 59.675 55.000 13.81 11.60 39.62 3.18
222 223 1.228245 GGAAGCCCAGCTGTGTTCA 60.228 57.895 13.81 0.00 39.62 3.18
223 224 1.239968 GGAAGCCCAGCTGTGTTCAG 61.240 60.000 13.81 0.00 39.62 3.02
224 225 0.536006 GAAGCCCAGCTGTGTTCAGT 60.536 55.000 13.81 0.00 43.05 3.41
225 226 0.106519 AAGCCCAGCTGTGTTCAGTT 60.107 50.000 13.81 0.00 43.05 3.16
226 227 0.536006 AGCCCAGCTGTGTTCAGTTC 60.536 55.000 13.81 0.00 43.05 3.01
227 228 1.518903 GCCCAGCTGTGTTCAGTTCC 61.519 60.000 13.81 0.00 43.05 3.62
228 229 0.179020 CCCAGCTGTGTTCAGTTCCA 60.179 55.000 13.81 0.00 43.05 3.53
229 230 0.947244 CCAGCTGTGTTCAGTTCCAC 59.053 55.000 13.81 0.00 43.05 4.02
230 231 0.583438 CAGCTGTGTTCAGTTCCACG 59.417 55.000 5.25 0.00 43.05 4.94
231 232 1.160329 AGCTGTGTTCAGTTCCACGC 61.160 55.000 0.00 0.00 43.05 5.34
232 233 1.564622 CTGTGTTCAGTTCCACGCG 59.435 57.895 3.53 3.53 36.97 6.01
233 234 1.831389 CTGTGTTCAGTTCCACGCGG 61.831 60.000 12.47 0.00 36.97 6.46
234 235 2.970324 TGTTCAGTTCCACGCGGC 60.970 61.111 12.47 0.00 0.00 6.53
235 236 2.665185 GTTCAGTTCCACGCGGCT 60.665 61.111 12.47 0.00 0.00 5.52
236 237 1.373748 GTTCAGTTCCACGCGGCTA 60.374 57.895 12.47 0.00 0.00 3.93
237 238 0.947180 GTTCAGTTCCACGCGGCTAA 60.947 55.000 12.47 0.00 0.00 3.09
238 239 0.947180 TTCAGTTCCACGCGGCTAAC 60.947 55.000 12.47 11.27 0.00 2.34
239 240 1.666553 CAGTTCCACGCGGCTAACA 60.667 57.895 12.47 0.00 0.00 2.41
240 241 1.019278 CAGTTCCACGCGGCTAACAT 61.019 55.000 12.47 0.00 0.00 2.71
241 242 1.019278 AGTTCCACGCGGCTAACATG 61.019 55.000 12.47 0.00 0.00 3.21
242 243 2.395360 TTCCACGCGGCTAACATGC 61.395 57.895 12.47 0.00 0.00 4.06
243 244 3.124270 CCACGCGGCTAACATGCA 61.124 61.111 12.47 0.00 34.04 3.96
244 245 2.472059 CCACGCGGCTAACATGCAT 61.472 57.895 12.47 0.00 34.04 3.96
245 246 1.157257 CCACGCGGCTAACATGCATA 61.157 55.000 12.47 0.00 34.04 3.14
246 247 0.233074 CACGCGGCTAACATGCATAG 59.767 55.000 12.47 0.00 34.04 2.23
247 248 1.205064 CGCGGCTAACATGCATAGC 59.795 57.895 18.29 18.29 43.99 2.97
248 249 1.498043 CGCGGCTAACATGCATAGCA 61.498 55.000 24.43 0.00 46.01 3.49
249 250 0.662619 GCGGCTAACATGCATAGCAA 59.337 50.000 24.43 0.00 46.01 3.91
250 251 1.334419 GCGGCTAACATGCATAGCAAG 60.334 52.381 24.43 19.59 46.01 4.01
251 252 1.942657 CGGCTAACATGCATAGCAAGT 59.057 47.619 24.43 1.77 46.01 3.16
252 253 2.286595 CGGCTAACATGCATAGCAAGTG 60.287 50.000 24.43 12.37 46.01 3.16
253 254 2.033801 GGCTAACATGCATAGCAAGTGG 59.966 50.000 24.43 0.00 46.01 4.00
254 255 2.542411 GCTAACATGCATAGCAAGTGGC 60.542 50.000 20.49 5.48 39.58 5.01
261 262 4.871600 ATGCATAGCAAGTGGCAAACACA 61.872 43.478 0.00 0.00 46.28 3.72
262 263 6.129111 ATGCATAGCAAGTGGCAAACACAT 62.129 41.667 0.00 0.00 46.28 3.21
263 264 7.849447 ATGCATAGCAAGTGGCAAACACATC 62.849 44.000 0.00 0.00 46.28 3.06
271 272 3.435105 TGGCAAACACATCAACAACTC 57.565 42.857 0.00 0.00 0.00 3.01
272 273 2.100584 TGGCAAACACATCAACAACTCC 59.899 45.455 0.00 0.00 0.00 3.85
273 274 2.545742 GGCAAACACATCAACAACTCCC 60.546 50.000 0.00 0.00 0.00 4.30
274 275 2.545742 GCAAACACATCAACAACTCCCC 60.546 50.000 0.00 0.00 0.00 4.81
275 276 1.995376 AACACATCAACAACTCCCCC 58.005 50.000 0.00 0.00 0.00 5.40
292 293 4.358841 CCGGATGCCACCCAACCA 62.359 66.667 0.00 0.00 36.23 3.67
293 294 3.061848 CGGATGCCACCCAACCAC 61.062 66.667 0.00 0.00 36.23 4.16
294 295 2.440599 GGATGCCACCCAACCACT 59.559 61.111 0.00 0.00 36.46 4.00
295 296 1.228862 GGATGCCACCCAACCACTT 60.229 57.895 0.00 0.00 36.46 3.16
296 297 0.831711 GGATGCCACCCAACCACTTT 60.832 55.000 0.00 0.00 36.46 2.66
297 298 1.047801 GATGCCACCCAACCACTTTT 58.952 50.000 0.00 0.00 0.00 2.27
298 299 0.758123 ATGCCACCCAACCACTTTTG 59.242 50.000 0.00 0.00 0.00 2.44
299 300 0.324738 TGCCACCCAACCACTTTTGA 60.325 50.000 0.00 0.00 0.00 2.69
300 301 0.827368 GCCACCCAACCACTTTTGAA 59.173 50.000 0.00 0.00 0.00 2.69
301 302 1.416030 GCCACCCAACCACTTTTGAAT 59.584 47.619 0.00 0.00 0.00 2.57
302 303 2.806382 GCCACCCAACCACTTTTGAATG 60.806 50.000 0.00 0.00 0.00 2.67
303 304 2.433970 CCACCCAACCACTTTTGAATGT 59.566 45.455 0.00 0.00 0.00 2.71
304 305 3.118445 CCACCCAACCACTTTTGAATGTT 60.118 43.478 0.00 0.00 0.00 2.71
305 306 4.119136 CACCCAACCACTTTTGAATGTTC 58.881 43.478 0.00 0.00 0.00 3.18
306 307 3.181480 ACCCAACCACTTTTGAATGTTCG 60.181 43.478 0.00 0.00 0.00 3.95
307 308 3.067461 CCCAACCACTTTTGAATGTTCGA 59.933 43.478 0.00 0.00 0.00 3.71
308 309 4.440802 CCCAACCACTTTTGAATGTTCGAA 60.441 41.667 0.00 0.00 0.00 3.71
309 310 5.288804 CCAACCACTTTTGAATGTTCGAAT 58.711 37.500 0.00 0.00 31.03 3.34
310 311 5.752955 CCAACCACTTTTGAATGTTCGAATT 59.247 36.000 0.00 0.00 31.03 2.17
311 312 6.257630 CCAACCACTTTTGAATGTTCGAATTT 59.742 34.615 0.00 0.00 31.03 1.82
312 313 7.201600 CCAACCACTTTTGAATGTTCGAATTTT 60.202 33.333 0.00 0.00 31.03 1.82
313 314 7.232945 ACCACTTTTGAATGTTCGAATTTTG 57.767 32.000 0.00 0.00 31.03 2.44
314 315 7.038659 ACCACTTTTGAATGTTCGAATTTTGA 58.961 30.769 0.00 0.00 31.03 2.69
315 316 7.547370 ACCACTTTTGAATGTTCGAATTTTGAA 59.453 29.630 0.00 0.00 31.03 2.69
316 317 7.845622 CCACTTTTGAATGTTCGAATTTTGAAC 59.154 33.333 18.75 18.75 44.64 3.18
323 324 4.340446 GTTCGAATTTTGAACAAGCACG 57.660 40.909 20.09 0.00 44.00 5.34
324 325 2.993545 TCGAATTTTGAACAAGCACGG 58.006 42.857 0.00 0.00 0.00 4.94
325 326 2.050691 CGAATTTTGAACAAGCACGGG 58.949 47.619 0.00 0.00 0.00 5.28
326 327 2.287308 CGAATTTTGAACAAGCACGGGA 60.287 45.455 0.00 0.00 0.00 5.14
327 328 3.308530 GAATTTTGAACAAGCACGGGAG 58.691 45.455 0.00 0.00 0.00 4.30
328 329 1.028905 TTTTGAACAAGCACGGGAGG 58.971 50.000 0.00 0.00 0.00 4.30
329 330 0.821711 TTTGAACAAGCACGGGAGGG 60.822 55.000 0.00 0.00 0.00 4.30
330 331 2.359975 GAACAAGCACGGGAGGGG 60.360 66.667 0.00 0.00 0.00 4.79
335 336 3.953775 AGCACGGGAGGGGTTGTG 61.954 66.667 0.00 0.00 44.93 3.33
336 337 3.948719 GCACGGGAGGGGTTGTGA 61.949 66.667 0.00 0.00 34.29 3.58
337 338 2.347490 CACGGGAGGGGTTGTGAG 59.653 66.667 0.00 0.00 34.29 3.51
338 339 3.637273 ACGGGAGGGGTTGTGAGC 61.637 66.667 0.00 0.00 0.00 4.26
339 340 3.636231 CGGGAGGGGTTGTGAGCA 61.636 66.667 0.00 0.00 0.00 4.26
340 341 2.352805 GGGAGGGGTTGTGAGCAG 59.647 66.667 0.00 0.00 0.00 4.24
341 342 2.352805 GGAGGGGTTGTGAGCAGG 59.647 66.667 0.00 0.00 0.00 4.85
342 343 2.352805 GAGGGGTTGTGAGCAGGG 59.647 66.667 0.00 0.00 0.00 4.45
343 344 3.260100 AGGGGTTGTGAGCAGGGG 61.260 66.667 0.00 0.00 0.00 4.79
344 345 4.366684 GGGGTTGTGAGCAGGGGG 62.367 72.222 0.00 0.00 0.00 5.40
361 362 3.247006 GGGGGTGTACATATATGAGCG 57.753 52.381 19.63 0.00 0.00 5.03
362 363 2.565834 GGGGGTGTACATATATGAGCGT 59.434 50.000 19.63 0.00 0.00 5.07
363 364 3.765511 GGGGGTGTACATATATGAGCGTA 59.234 47.826 19.63 0.00 0.00 4.42
364 365 4.404715 GGGGGTGTACATATATGAGCGTAT 59.595 45.833 19.63 0.00 0.00 3.06
365 366 5.348986 GGGGTGTACATATATGAGCGTATG 58.651 45.833 19.63 0.00 35.08 2.39
366 367 5.348986 GGGTGTACATATATGAGCGTATGG 58.651 45.833 19.63 0.00 33.61 2.74
367 368 4.804139 GGTGTACATATATGAGCGTATGGC 59.196 45.833 19.63 0.33 44.05 4.40
376 377 4.626081 GCGTATGGCGGCCCAGAT 62.626 66.667 17.97 6.03 46.24 2.90
377 378 2.666190 CGTATGGCGGCCCAGATG 60.666 66.667 17.97 3.84 46.24 2.90
378 379 2.281761 GTATGGCGGCCCAGATGG 60.282 66.667 17.97 0.00 46.24 3.51
379 380 2.447572 TATGGCGGCCCAGATGGA 60.448 61.111 17.97 0.00 46.24 3.41
380 381 2.519622 TATGGCGGCCCAGATGGAG 61.520 63.158 17.97 0.00 46.24 3.86
382 383 4.864334 GGCGGCCCAGATGGAGTG 62.864 72.222 8.12 0.00 37.39 3.51
383 384 3.785859 GCGGCCCAGATGGAGTGA 61.786 66.667 0.00 0.00 37.39 3.41
384 385 2.187946 CGGCCCAGATGGAGTGAC 59.812 66.667 0.00 0.00 37.39 3.67
385 386 2.592308 GGCCCAGATGGAGTGACC 59.408 66.667 0.00 0.00 37.39 4.02
386 387 2.592308 GCCCAGATGGAGTGACCC 59.408 66.667 0.00 0.00 37.39 4.46
387 388 2.903357 CCCAGATGGAGTGACCCG 59.097 66.667 0.00 0.00 37.39 5.28
388 389 1.990060 CCCAGATGGAGTGACCCGT 60.990 63.158 0.00 0.00 37.39 5.28
389 390 1.517832 CCAGATGGAGTGACCCGTC 59.482 63.158 0.00 4.70 41.47 4.79
390 391 1.139734 CAGATGGAGTGACCCGTCG 59.860 63.158 6.65 0.00 44.86 5.12
391 392 2.052690 AGATGGAGTGACCCGTCGG 61.053 63.158 3.60 3.60 44.86 4.79
400 401 2.283388 ACCCGTCGGTCCTGCTAA 60.283 61.111 11.06 0.00 38.28 3.09
401 402 1.909781 ACCCGTCGGTCCTGCTAAA 60.910 57.895 11.06 0.00 38.28 1.85
402 403 1.294138 CCCGTCGGTCCTGCTAAAA 59.706 57.895 11.06 0.00 0.00 1.52
403 404 0.739813 CCCGTCGGTCCTGCTAAAAG 60.740 60.000 11.06 0.00 0.00 2.27
404 405 1.359459 CCGTCGGTCCTGCTAAAAGC 61.359 60.000 2.08 0.00 42.82 3.51
405 406 1.359459 CGTCGGTCCTGCTAAAAGCC 61.359 60.000 0.00 0.00 41.51 4.35
406 407 1.079405 TCGGTCCTGCTAAAAGCCG 60.079 57.895 0.00 0.00 41.51 5.52
407 408 2.106683 CGGTCCTGCTAAAAGCCGG 61.107 63.158 0.00 0.00 45.60 6.13
408 409 2.407428 GGTCCTGCTAAAAGCCGGC 61.407 63.158 21.89 21.89 44.14 6.13
409 410 2.045340 TCCTGCTAAAAGCCGGCC 60.045 61.111 26.15 7.06 44.14 6.13
410 411 2.044946 CCTGCTAAAAGCCGGCCT 60.045 61.111 26.15 7.54 38.74 5.19
411 412 1.678970 CCTGCTAAAAGCCGGCCTT 60.679 57.895 26.15 19.70 38.74 4.35
412 413 1.657751 CCTGCTAAAAGCCGGCCTTC 61.658 60.000 26.15 5.30 38.74 3.46
413 414 0.678048 CTGCTAAAAGCCGGCCTTCT 60.678 55.000 26.15 10.10 41.51 2.85
414 415 0.616371 TGCTAAAAGCCGGCCTTCTA 59.384 50.000 26.15 10.72 41.51 2.10
415 416 1.003812 TGCTAAAAGCCGGCCTTCTAA 59.996 47.619 26.15 5.01 41.51 2.10
416 417 1.671328 GCTAAAAGCCGGCCTTCTAAG 59.329 52.381 26.15 15.64 34.48 2.18
417 418 2.679930 GCTAAAAGCCGGCCTTCTAAGA 60.680 50.000 26.15 0.21 34.48 2.10
418 419 1.822506 AAAAGCCGGCCTTCTAAGAC 58.177 50.000 26.15 0.00 31.99 3.01
419 420 0.035343 AAAGCCGGCCTTCTAAGACC 60.035 55.000 26.15 0.00 31.99 3.85
423 424 3.940723 CGGCCTTCTAAGACCGTAG 57.059 57.895 9.06 0.00 45.45 3.51
424 425 1.101331 CGGCCTTCTAAGACCGTAGT 58.899 55.000 9.06 0.00 45.45 2.73
425 426 2.292267 CGGCCTTCTAAGACCGTAGTA 58.708 52.381 9.06 0.00 45.45 1.82
426 427 2.290093 CGGCCTTCTAAGACCGTAGTAG 59.710 54.545 9.06 0.00 45.45 2.57
427 428 3.549794 GGCCTTCTAAGACCGTAGTAGA 58.450 50.000 0.00 0.00 0.00 2.59
428 429 3.314913 GGCCTTCTAAGACCGTAGTAGAC 59.685 52.174 0.00 0.00 0.00 2.59
429 430 3.314913 GCCTTCTAAGACCGTAGTAGACC 59.685 52.174 0.00 0.00 0.00 3.85
430 431 4.779696 CCTTCTAAGACCGTAGTAGACCT 58.220 47.826 0.00 0.00 0.00 3.85
431 432 5.686124 GCCTTCTAAGACCGTAGTAGACCTA 60.686 48.000 0.00 0.00 0.00 3.08
432 433 6.532826 CCTTCTAAGACCGTAGTAGACCTAT 58.467 44.000 0.00 0.00 0.00 2.57
433 434 7.675062 CCTTCTAAGACCGTAGTAGACCTATA 58.325 42.308 0.00 0.00 0.00 1.31
434 435 7.818930 CCTTCTAAGACCGTAGTAGACCTATAG 59.181 44.444 0.00 0.00 0.00 1.31
435 436 6.696411 TCTAAGACCGTAGTAGACCTATAGC 58.304 44.000 0.00 0.00 0.00 2.97
436 437 3.924144 AGACCGTAGTAGACCTATAGCG 58.076 50.000 0.00 0.00 0.00 4.26
437 438 3.323403 AGACCGTAGTAGACCTATAGCGT 59.677 47.826 0.00 0.00 0.00 5.07
438 439 4.061596 GACCGTAGTAGACCTATAGCGTT 58.938 47.826 0.00 0.00 0.00 4.84
439 440 3.812053 ACCGTAGTAGACCTATAGCGTTG 59.188 47.826 0.00 0.00 0.00 4.10
440 441 3.188048 CCGTAGTAGACCTATAGCGTTGG 59.812 52.174 0.00 0.00 0.00 3.77
441 442 3.188048 CGTAGTAGACCTATAGCGTTGGG 59.812 52.174 0.00 0.00 0.00 4.12
442 443 1.962100 AGTAGACCTATAGCGTTGGGC 59.038 52.381 0.00 0.00 44.05 5.36
443 444 1.000618 GTAGACCTATAGCGTTGGGCC 59.999 57.143 0.00 0.00 45.17 5.80
444 445 0.398664 AGACCTATAGCGTTGGGCCT 60.399 55.000 4.53 0.00 45.17 5.19
445 446 0.033642 GACCTATAGCGTTGGGCCTC 59.966 60.000 4.53 0.00 45.17 4.70
446 447 0.689745 ACCTATAGCGTTGGGCCTCA 60.690 55.000 4.53 0.00 45.17 3.86
447 448 0.687354 CCTATAGCGTTGGGCCTCAT 59.313 55.000 4.53 0.00 45.17 2.90
448 449 1.899814 CCTATAGCGTTGGGCCTCATA 59.100 52.381 4.53 0.00 45.17 2.15
449 450 2.301870 CCTATAGCGTTGGGCCTCATAA 59.698 50.000 4.53 0.00 45.17 1.90
450 451 3.055094 CCTATAGCGTTGGGCCTCATAAT 60.055 47.826 4.53 0.00 45.17 1.28
451 452 3.508845 ATAGCGTTGGGCCTCATAATT 57.491 42.857 4.53 0.00 45.17 1.40
452 453 4.634012 ATAGCGTTGGGCCTCATAATTA 57.366 40.909 4.53 0.00 45.17 1.40
453 454 3.290948 AGCGTTGGGCCTCATAATTAA 57.709 42.857 4.53 0.00 45.17 1.40
454 455 2.949644 AGCGTTGGGCCTCATAATTAAC 59.050 45.455 4.53 0.00 45.17 2.01
455 456 2.685897 GCGTTGGGCCTCATAATTAACA 59.314 45.455 4.53 0.00 34.80 2.41
456 457 3.129638 GCGTTGGGCCTCATAATTAACAA 59.870 43.478 4.53 0.00 34.80 2.83
457 458 4.381079 GCGTTGGGCCTCATAATTAACAAA 60.381 41.667 4.53 0.00 34.80 2.83
458 459 5.715070 CGTTGGGCCTCATAATTAACAAAA 58.285 37.500 4.53 0.00 0.00 2.44
459 460 5.804979 CGTTGGGCCTCATAATTAACAAAAG 59.195 40.000 4.53 0.00 0.00 2.27
460 461 6.349777 CGTTGGGCCTCATAATTAACAAAAGA 60.350 38.462 4.53 0.00 0.00 2.52
461 462 6.524101 TGGGCCTCATAATTAACAAAAGAC 57.476 37.500 4.53 0.00 0.00 3.01
462 463 6.013379 TGGGCCTCATAATTAACAAAAGACA 58.987 36.000 4.53 0.00 0.00 3.41
463 464 6.495181 TGGGCCTCATAATTAACAAAAGACAA 59.505 34.615 4.53 0.00 0.00 3.18
464 465 7.035612 GGGCCTCATAATTAACAAAAGACAAG 58.964 38.462 0.84 0.00 0.00 3.16
465 466 7.309805 GGGCCTCATAATTAACAAAAGACAAGT 60.310 37.037 0.84 0.00 0.00 3.16
466 467 7.755373 GGCCTCATAATTAACAAAAGACAAGTC 59.245 37.037 0.00 0.00 0.00 3.01
467 468 8.515414 GCCTCATAATTAACAAAAGACAAGTCT 58.485 33.333 0.00 0.00 42.75 3.24
469 470 9.746711 CTCATAATTAACAAAAGACAAGTCTCG 57.253 33.333 2.78 0.00 39.39 4.04
470 471 9.268268 TCATAATTAACAAAAGACAAGTCTCGT 57.732 29.630 2.78 0.00 39.39 4.18
471 472 9.878599 CATAATTAACAAAAGACAAGTCTCGTT 57.121 29.630 2.78 9.72 39.39 3.85
472 473 9.878599 ATAATTAACAAAAGACAAGTCTCGTTG 57.121 29.630 17.94 17.94 39.39 4.10
473 474 3.675467 ACAAAAGACAAGTCTCGTTGC 57.325 42.857 18.83 0.00 39.39 4.17
474 475 3.270877 ACAAAAGACAAGTCTCGTTGCT 58.729 40.909 18.83 9.34 39.39 3.91
475 476 4.439057 ACAAAAGACAAGTCTCGTTGCTA 58.561 39.130 18.83 0.00 39.39 3.49
476 477 4.270325 ACAAAAGACAAGTCTCGTTGCTAC 59.730 41.667 18.83 0.00 39.39 3.58
477 478 4.323553 AAAGACAAGTCTCGTTGCTACT 57.676 40.909 2.78 0.00 39.39 2.57
478 479 3.290308 AGACAAGTCTCGTTGCTACTG 57.710 47.619 0.00 0.00 34.17 2.74
479 480 2.623889 AGACAAGTCTCGTTGCTACTGT 59.376 45.455 0.00 0.00 34.17 3.55
480 481 2.726760 GACAAGTCTCGTTGCTACTGTG 59.273 50.000 0.00 0.00 0.00 3.66
481 482 1.457303 CAAGTCTCGTTGCTACTGTGC 59.543 52.381 0.00 0.00 0.00 4.57
482 483 0.962489 AGTCTCGTTGCTACTGTGCT 59.038 50.000 0.00 0.00 0.00 4.40
483 484 1.068194 AGTCTCGTTGCTACTGTGCTC 60.068 52.381 0.00 0.00 0.00 4.26
484 485 0.958822 TCTCGTTGCTACTGTGCTCA 59.041 50.000 0.00 0.00 0.00 4.26
485 486 1.339929 TCTCGTTGCTACTGTGCTCAA 59.660 47.619 0.00 0.00 0.00 3.02
486 487 2.029020 TCTCGTTGCTACTGTGCTCAAT 60.029 45.455 0.00 0.00 0.00 2.57
487 488 2.738846 CTCGTTGCTACTGTGCTCAATT 59.261 45.455 0.00 0.00 0.00 2.32
488 489 2.736721 TCGTTGCTACTGTGCTCAATTC 59.263 45.455 0.00 0.00 0.00 2.17
489 490 2.480037 CGTTGCTACTGTGCTCAATTCA 59.520 45.455 0.00 0.00 0.00 2.57
490 491 3.125829 CGTTGCTACTGTGCTCAATTCAT 59.874 43.478 0.00 0.00 0.00 2.57
491 492 4.378770 CGTTGCTACTGTGCTCAATTCATT 60.379 41.667 0.00 0.00 0.00 2.57
492 493 4.690184 TGCTACTGTGCTCAATTCATTG 57.310 40.909 0.00 0.00 39.10 2.82
493 494 3.441222 TGCTACTGTGCTCAATTCATTGG 59.559 43.478 0.00 0.00 38.30 3.16
494 495 3.733077 GCTACTGTGCTCAATTCATTGGC 60.733 47.826 0.00 3.52 38.30 4.52
495 496 2.241160 ACTGTGCTCAATTCATTGGCA 58.759 42.857 10.05 10.05 39.71 4.92
496 497 2.629137 ACTGTGCTCAATTCATTGGCAA 59.371 40.909 0.68 0.68 41.80 4.52
497 498 3.069872 ACTGTGCTCAATTCATTGGCAAA 59.930 39.130 3.01 9.85 41.80 3.68
498 499 3.655486 TGTGCTCAATTCATTGGCAAAG 58.345 40.909 3.01 0.00 41.80 2.77
499 500 2.414138 GTGCTCAATTCATTGGCAAAGC 59.586 45.455 3.01 7.47 41.80 3.51
500 501 2.300723 TGCTCAATTCATTGGCAAAGCT 59.699 40.909 16.17 0.00 39.35 3.74
501 502 2.671396 GCTCAATTCATTGGCAAAGCTG 59.329 45.455 3.01 0.00 38.30 4.24
502 503 3.615592 GCTCAATTCATTGGCAAAGCTGA 60.616 43.478 3.01 0.10 38.30 4.26
503 504 4.562082 CTCAATTCATTGGCAAAGCTGAA 58.438 39.130 14.95 14.95 38.30 3.02
504 505 5.155278 TCAATTCATTGGCAAAGCTGAAT 57.845 34.783 17.52 17.52 39.39 2.57
505 506 6.283544 TCAATTCATTGGCAAAGCTGAATA 57.716 33.333 21.46 9.53 37.35 1.75
506 507 6.101332 TCAATTCATTGGCAAAGCTGAATAC 58.899 36.000 21.46 0.00 37.35 1.89
507 508 5.664294 ATTCATTGGCAAAGCTGAATACA 57.336 34.783 20.37 1.05 36.76 2.29
508 509 5.664294 TTCATTGGCAAAGCTGAATACAT 57.336 34.783 3.01 0.00 0.00 2.29
509 510 6.772360 TTCATTGGCAAAGCTGAATACATA 57.228 33.333 3.01 0.00 0.00 2.29
510 511 6.964807 TCATTGGCAAAGCTGAATACATAT 57.035 33.333 3.01 0.00 0.00 1.78
511 512 6.741109 TCATTGGCAAAGCTGAATACATATG 58.259 36.000 3.01 0.00 0.00 1.78
512 513 4.572985 TGGCAAAGCTGAATACATATGC 57.427 40.909 1.58 0.00 0.00 3.14
513 514 3.952967 TGGCAAAGCTGAATACATATGCA 59.047 39.130 1.58 0.00 0.00 3.96
514 515 4.585581 TGGCAAAGCTGAATACATATGCAT 59.414 37.500 3.79 3.79 0.00 3.96
515 516 5.769162 TGGCAAAGCTGAATACATATGCATA 59.231 36.000 9.27 9.27 0.00 3.14
516 517 6.434965 TGGCAAAGCTGAATACATATGCATAT 59.565 34.615 13.63 13.63 0.00 1.78
517 518 7.611079 TGGCAAAGCTGAATACATATGCATATA 59.389 33.333 18.70 5.27 0.00 0.86
518 519 7.912250 GGCAAAGCTGAATACATATGCATATAC 59.088 37.037 18.70 8.85 0.00 1.47
519 520 8.453320 GCAAAGCTGAATACATATGCATATACA 58.547 33.333 18.70 9.96 0.00 2.29
531 532 2.430828 CATATACATGCATGCGCGAG 57.569 50.000 26.53 10.34 42.97 5.03
532 533 1.994779 CATATACATGCATGCGCGAGA 59.005 47.619 26.53 7.39 42.97 4.04
533 534 2.147436 TATACATGCATGCGCGAGAA 57.853 45.000 26.53 4.06 42.97 2.87
534 535 1.516161 ATACATGCATGCGCGAGAAT 58.484 45.000 26.53 7.00 42.97 2.40
535 536 0.861185 TACATGCATGCGCGAGAATC 59.139 50.000 26.53 0.00 42.97 2.52
536 537 0.812811 ACATGCATGCGCGAGAATCT 60.813 50.000 26.53 0.00 42.97 2.40
537 538 0.110778 CATGCATGCGCGAGAATCTC 60.111 55.000 14.93 0.00 42.97 2.75
553 554 3.275088 TCGAGGACGAGCAAGGAC 58.725 61.111 0.00 0.00 43.81 3.85
554 555 1.303398 TCGAGGACGAGCAAGGACT 60.303 57.895 0.00 0.00 43.81 3.85
555 556 1.153939 CGAGGACGAGCAAGGACTG 60.154 63.158 0.00 0.00 42.66 3.51
556 557 1.216710 GAGGACGAGCAAGGACTGG 59.783 63.158 0.00 0.00 0.00 4.00
557 558 2.232298 GAGGACGAGCAAGGACTGGG 62.232 65.000 0.00 0.00 0.00 4.45
558 559 2.283529 GGACGAGCAAGGACTGGGA 61.284 63.158 0.00 0.00 0.00 4.37
559 560 1.617947 GGACGAGCAAGGACTGGGAT 61.618 60.000 0.00 0.00 0.00 3.85
560 561 1.112113 GACGAGCAAGGACTGGGATA 58.888 55.000 0.00 0.00 0.00 2.59
561 562 1.480954 GACGAGCAAGGACTGGGATAA 59.519 52.381 0.00 0.00 0.00 1.75
562 563 2.103263 GACGAGCAAGGACTGGGATAAT 59.897 50.000 0.00 0.00 0.00 1.28
563 564 3.305720 ACGAGCAAGGACTGGGATAATA 58.694 45.455 0.00 0.00 0.00 0.98
564 565 3.322254 ACGAGCAAGGACTGGGATAATAG 59.678 47.826 0.00 0.00 0.00 1.73
565 566 3.322254 CGAGCAAGGACTGGGATAATAGT 59.678 47.826 0.00 0.00 0.00 2.12
566 567 4.523173 CGAGCAAGGACTGGGATAATAGTA 59.477 45.833 0.00 0.00 0.00 1.82
567 568 5.565045 CGAGCAAGGACTGGGATAATAGTAC 60.565 48.000 0.00 0.00 0.00 2.73
568 569 4.593634 AGCAAGGACTGGGATAATAGTACC 59.406 45.833 0.00 0.00 0.00 3.34
569 570 4.347000 GCAAGGACTGGGATAATAGTACCA 59.653 45.833 0.00 0.00 0.00 3.25
570 571 5.013183 GCAAGGACTGGGATAATAGTACCAT 59.987 44.000 0.00 0.00 31.62 3.55
571 572 6.212791 GCAAGGACTGGGATAATAGTACCATA 59.787 42.308 0.00 0.00 31.62 2.74
572 573 7.092846 GCAAGGACTGGGATAATAGTACCATAT 60.093 40.741 0.00 0.00 31.62 1.78
573 574 9.488762 CAAGGACTGGGATAATAGTACCATATA 57.511 37.037 0.00 0.00 31.62 0.86
574 575 9.716556 AAGGACTGGGATAATAGTACCATATAG 57.283 37.037 0.00 0.00 31.62 1.31
575 576 8.857997 AGGACTGGGATAATAGTACCATATAGT 58.142 37.037 0.00 0.00 31.62 2.12
653 654 1.492993 AAAGAGGGTGGAGTCAGGCC 61.493 60.000 0.00 0.00 0.00 5.19
734 735 8.925700 GTTTCCACTTTAAGCAATGATTTTAGG 58.074 33.333 0.00 0.00 0.00 2.69
799 800 9.897744 AATAGAAGAAACAAATGTATGTGTGTG 57.102 29.630 0.00 0.00 32.81 3.82
801 802 7.195646 AGAAGAAACAAATGTATGTGTGTGTG 58.804 34.615 0.00 0.00 32.81 3.82
802 803 6.449635 AGAAACAAATGTATGTGTGTGTGT 57.550 33.333 0.00 0.00 32.81 3.72
804 805 5.574891 AACAAATGTATGTGTGTGTGTGT 57.425 34.783 0.00 0.00 32.81 3.72
805 806 4.919206 ACAAATGTATGTGTGTGTGTGTG 58.081 39.130 0.00 0.00 30.82 3.82
806 807 4.397730 ACAAATGTATGTGTGTGTGTGTGT 59.602 37.500 0.00 0.00 30.82 3.72
807 808 4.550577 AATGTATGTGTGTGTGTGTGTG 57.449 40.909 0.00 0.00 0.00 3.82
809 810 2.675348 TGTATGTGTGTGTGTGTGTGTG 59.325 45.455 0.00 0.00 0.00 3.82
811 812 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
813 814 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
814 815 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
815 816 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
816 817 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
817 818 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
818 819 0.454285 GTGTGTGTGTGTGTGTGTGC 60.454 55.000 0.00 0.00 0.00 4.57
819 820 1.225991 GTGTGTGTGTGTGTGTGCG 60.226 57.895 0.00 0.00 0.00 5.34
820 821 2.277247 GTGTGTGTGTGTGTGCGC 60.277 61.111 0.00 0.00 0.00 6.09
821 822 3.858989 TGTGTGTGTGTGTGCGCG 61.859 61.111 0.00 0.00 0.00 6.86
839 840 4.427793 CGCGCGCGTGTCTATATA 57.572 55.556 42.49 0.00 34.35 0.86
840 841 2.926074 CGCGCGCGTGTCTATATAT 58.074 52.632 42.49 0.00 34.35 0.86
841 842 2.081336 CGCGCGCGTGTCTATATATA 57.919 50.000 42.49 0.00 34.35 0.86
972 1003 9.788960 GTTGATTGTATCCTTAACCATTTCTTC 57.211 33.333 0.00 0.00 0.00 2.87
973 1004 9.753674 TTGATTGTATCCTTAACCATTTCTTCT 57.246 29.630 0.00 0.00 0.00 2.85
1014 1045 7.914427 ACTACTCACCATGAATCCACTAATA 57.086 36.000 0.00 0.00 0.00 0.98
1016 1047 6.814954 ACTCACCATGAATCCACTAATAGT 57.185 37.500 0.00 0.00 0.00 2.12
1019 1050 6.957631 TCACCATGAATCCACTAATAGTTGT 58.042 36.000 0.00 0.00 0.00 3.32
1037 1068 4.339247 AGTTGTTGCTTCTGTTATTGCTGT 59.661 37.500 0.00 0.00 0.00 4.40
1127 1158 1.827969 AGAAGGTATTGCGAGACAGCT 59.172 47.619 0.29 0.00 38.13 4.24
1153 1184 4.504858 AGCAGAAGGTAAAATACGAGGTG 58.495 43.478 0.00 0.00 0.00 4.00
1315 1350 8.700439 TTTTAGTAAATTGGTACTTGCTTCCT 57.300 30.769 0.00 0.00 35.85 3.36
1413 1448 6.013293 ACTGATAATACCCCATTCTAGGAAGC 60.013 42.308 0.00 0.00 0.00 3.86
1532 1567 5.722021 TTAGGAATTTTGGGAACAGAAGC 57.278 39.130 0.00 0.00 44.54 3.86
1677 1714 7.810282 TGATCGAAAAACTTTGTTCTTTGTTCA 59.190 29.630 0.00 0.00 0.00 3.18
1770 1809 4.065789 GCTAGCAGTTTCGGGCTTAATAT 58.934 43.478 10.63 0.00 41.41 1.28
1868 1910 7.386573 TGTGCGAGTTGTCTATTTCAAGAATAA 59.613 33.333 0.00 0.00 0.00 1.40
1937 1979 7.732222 TTGGATAAATAAGAAAAGGGTGCAT 57.268 32.000 0.00 0.00 0.00 3.96
2087 2129 3.071602 AGCTAAACTGCTTGAAGTCCAGA 59.928 43.478 6.79 0.00 40.93 3.86
2242 2287 3.906660 GCACCCTGCCCTTTTTAAC 57.093 52.632 0.00 0.00 37.42 2.01
2244 2289 1.710816 CACCCTGCCCTTTTTAACCA 58.289 50.000 0.00 0.00 0.00 3.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 9.426837 CATCAGGTTTTACATCACAAATTCATT 57.573 29.630 0.00 0.00 0.00 2.57
13 14 8.587608 ACATCAGGTTTTACATCACAAATTCAT 58.412 29.630 0.00 0.00 0.00 2.57
14 15 7.950512 ACATCAGGTTTTACATCACAAATTCA 58.049 30.769 0.00 0.00 0.00 2.57
15 16 9.906660 TTACATCAGGTTTTACATCACAAATTC 57.093 29.630 0.00 0.00 0.00 2.17
19 20 9.689976 CAAATTACATCAGGTTTTACATCACAA 57.310 29.630 0.00 0.00 0.00 3.33
20 21 7.812191 GCAAATTACATCAGGTTTTACATCACA 59.188 33.333 0.00 0.00 0.00 3.58
21 22 8.028938 AGCAAATTACATCAGGTTTTACATCAC 58.971 33.333 0.00 0.00 0.00 3.06
22 23 8.121305 AGCAAATTACATCAGGTTTTACATCA 57.879 30.769 0.00 0.00 0.00 3.07
23 24 8.863049 CAAGCAAATTACATCAGGTTTTACATC 58.137 33.333 0.00 0.00 0.00 3.06
24 25 7.331687 GCAAGCAAATTACATCAGGTTTTACAT 59.668 33.333 0.00 0.00 0.00 2.29
25 26 6.644592 GCAAGCAAATTACATCAGGTTTTACA 59.355 34.615 0.00 0.00 0.00 2.41
26 27 6.644592 TGCAAGCAAATTACATCAGGTTTTAC 59.355 34.615 0.00 0.00 0.00 2.01
27 28 6.753180 TGCAAGCAAATTACATCAGGTTTTA 58.247 32.000 0.00 0.00 0.00 1.52
28 29 5.609423 TGCAAGCAAATTACATCAGGTTTT 58.391 33.333 0.00 0.00 0.00 2.43
29 30 5.212532 TGCAAGCAAATTACATCAGGTTT 57.787 34.783 0.00 0.00 0.00 3.27
30 31 4.870123 TGCAAGCAAATTACATCAGGTT 57.130 36.364 0.00 0.00 0.00 3.50
31 32 4.870123 TTGCAAGCAAATTACATCAGGT 57.130 36.364 4.79 0.00 32.44 4.00
32 33 4.033587 GCATTGCAAGCAAATTACATCAGG 59.966 41.667 11.89 0.00 39.55 3.86
33 34 4.627900 TGCATTGCAAGCAAATTACATCAG 59.372 37.500 17.51 0.00 39.39 2.90
34 35 4.566987 TGCATTGCAAGCAAATTACATCA 58.433 34.783 17.51 0.35 39.39 3.07
35 36 4.628333 ACTGCATTGCAAGCAAATTACATC 59.372 37.500 19.41 0.00 42.17 3.06
36 37 4.571919 ACTGCATTGCAAGCAAATTACAT 58.428 34.783 19.41 0.00 42.17 2.29
37 38 3.989167 GACTGCATTGCAAGCAAATTACA 59.011 39.130 19.41 6.85 42.17 2.41
38 39 4.090930 CAGACTGCATTGCAAGCAAATTAC 59.909 41.667 19.41 11.52 42.17 1.89
39 40 4.239304 CAGACTGCATTGCAAGCAAATTA 58.761 39.130 19.41 0.42 42.17 1.40
40 41 3.064207 CAGACTGCATTGCAAGCAAATT 58.936 40.909 19.41 10.29 42.17 1.82
41 42 2.036733 ACAGACTGCATTGCAAGCAAAT 59.963 40.909 19.41 13.01 42.17 2.32
42 43 1.409790 ACAGACTGCATTGCAAGCAAA 59.590 42.857 19.41 0.00 42.17 3.68
43 44 1.034356 ACAGACTGCATTGCAAGCAA 58.966 45.000 19.41 10.19 42.17 3.91
44 45 0.312729 CACAGACTGCATTGCAAGCA 59.687 50.000 13.18 18.35 38.41 3.91
45 46 0.313043 ACACAGACTGCATTGCAAGC 59.687 50.000 13.18 9.48 38.41 4.01
46 47 2.810274 AGTACACAGACTGCATTGCAAG 59.190 45.455 13.18 9.32 38.41 4.01
47 48 2.807967 GAGTACACAGACTGCATTGCAA 59.192 45.455 13.18 0.00 38.41 4.08
48 49 2.416747 GAGTACACAGACTGCATTGCA 58.583 47.619 11.50 11.50 36.92 4.08
49 50 1.734465 GGAGTACACAGACTGCATTGC 59.266 52.381 1.25 0.46 37.69 3.56
50 51 3.044235 TGGAGTACACAGACTGCATTG 57.956 47.619 1.25 0.00 42.17 2.82
54 55 2.160417 GCAAATGGAGTACACAGACTGC 59.840 50.000 1.25 1.29 38.21 4.40
55 56 2.744202 GGCAAATGGAGTACACAGACTG 59.256 50.000 0.00 0.00 0.00 3.51
56 57 2.371841 TGGCAAATGGAGTACACAGACT 59.628 45.455 0.00 0.00 0.00 3.24
57 58 2.778299 TGGCAAATGGAGTACACAGAC 58.222 47.619 0.00 0.00 0.00 3.51
58 59 3.264193 AGATGGCAAATGGAGTACACAGA 59.736 43.478 0.00 0.00 0.00 3.41
59 60 3.614092 AGATGGCAAATGGAGTACACAG 58.386 45.455 0.00 0.00 0.00 3.66
60 61 3.719268 AGATGGCAAATGGAGTACACA 57.281 42.857 0.00 0.00 0.00 3.72
61 62 3.063997 CGAAGATGGCAAATGGAGTACAC 59.936 47.826 0.00 0.00 0.00 2.90
62 63 3.270027 CGAAGATGGCAAATGGAGTACA 58.730 45.455 0.00 0.00 0.00 2.90
63 64 2.614057 CCGAAGATGGCAAATGGAGTAC 59.386 50.000 0.00 0.00 0.00 2.73
64 65 2.238646 ACCGAAGATGGCAAATGGAGTA 59.761 45.455 0.00 0.00 0.00 2.59
65 66 1.004745 ACCGAAGATGGCAAATGGAGT 59.995 47.619 0.00 0.00 0.00 3.85
66 67 1.755179 ACCGAAGATGGCAAATGGAG 58.245 50.000 0.00 0.00 0.00 3.86
67 68 2.214376 AACCGAAGATGGCAAATGGA 57.786 45.000 0.00 0.00 0.00 3.41
68 69 4.362279 CAATAACCGAAGATGGCAAATGG 58.638 43.478 0.00 0.00 0.00 3.16
69 70 3.798337 GCAATAACCGAAGATGGCAAATG 59.202 43.478 0.00 0.00 0.00 2.32
70 71 3.701040 AGCAATAACCGAAGATGGCAAAT 59.299 39.130 0.00 0.00 0.00 2.32
71 72 3.088532 AGCAATAACCGAAGATGGCAAA 58.911 40.909 0.00 0.00 0.00 3.68
72 73 2.423185 CAGCAATAACCGAAGATGGCAA 59.577 45.455 0.00 0.00 0.00 4.52
73 74 2.016318 CAGCAATAACCGAAGATGGCA 58.984 47.619 0.00 0.00 0.00 4.92
74 75 2.017049 ACAGCAATAACCGAAGATGGC 58.983 47.619 0.00 0.00 0.00 4.40
75 76 3.242413 CGAACAGCAATAACCGAAGATGG 60.242 47.826 0.00 0.00 0.00 3.51
76 77 3.928211 CGAACAGCAATAACCGAAGATG 58.072 45.455 0.00 0.00 0.00 2.90
107 108 6.016443 CAGGCTCTCTCAAACTTCTCATTTTT 60.016 38.462 0.00 0.00 0.00 1.94
108 109 5.472820 CAGGCTCTCTCAAACTTCTCATTTT 59.527 40.000 0.00 0.00 0.00 1.82
109 110 5.002516 CAGGCTCTCTCAAACTTCTCATTT 58.997 41.667 0.00 0.00 0.00 2.32
110 111 4.041444 ACAGGCTCTCTCAAACTTCTCATT 59.959 41.667 0.00 0.00 0.00 2.57
111 112 3.582208 ACAGGCTCTCTCAAACTTCTCAT 59.418 43.478 0.00 0.00 0.00 2.90
112 113 2.968574 ACAGGCTCTCTCAAACTTCTCA 59.031 45.455 0.00 0.00 0.00 3.27
113 114 3.676291 ACAGGCTCTCTCAAACTTCTC 57.324 47.619 0.00 0.00 0.00 2.87
114 115 3.389329 TCAACAGGCTCTCTCAAACTTCT 59.611 43.478 0.00 0.00 0.00 2.85
115 116 3.733337 TCAACAGGCTCTCTCAAACTTC 58.267 45.455 0.00 0.00 0.00 3.01
116 117 3.135530 ACTCAACAGGCTCTCTCAAACTT 59.864 43.478 0.00 0.00 0.00 2.66
117 118 2.703007 ACTCAACAGGCTCTCTCAAACT 59.297 45.455 0.00 0.00 0.00 2.66
118 119 3.118905 ACTCAACAGGCTCTCTCAAAC 57.881 47.619 0.00 0.00 0.00 2.93
119 120 3.259374 CCTACTCAACAGGCTCTCTCAAA 59.741 47.826 0.00 0.00 0.00 2.69
120 121 2.828520 CCTACTCAACAGGCTCTCTCAA 59.171 50.000 0.00 0.00 0.00 3.02
121 122 2.225142 ACCTACTCAACAGGCTCTCTCA 60.225 50.000 0.00 0.00 36.57 3.27
122 123 2.165437 CACCTACTCAACAGGCTCTCTC 59.835 54.545 0.00 0.00 36.57 3.20
123 124 2.175202 CACCTACTCAACAGGCTCTCT 58.825 52.381 0.00 0.00 36.57 3.10
124 125 1.896465 ACACCTACTCAACAGGCTCTC 59.104 52.381 0.00 0.00 36.57 3.20
125 126 2.016905 ACACCTACTCAACAGGCTCT 57.983 50.000 0.00 0.00 36.57 4.09
126 127 2.224305 ACAACACCTACTCAACAGGCTC 60.224 50.000 0.00 0.00 36.57 4.70
127 128 1.768870 ACAACACCTACTCAACAGGCT 59.231 47.619 0.00 0.00 36.57 4.58
128 129 2.256117 ACAACACCTACTCAACAGGC 57.744 50.000 0.00 0.00 36.57 4.85
129 130 3.809832 CAGAACAACACCTACTCAACAGG 59.190 47.826 0.00 0.00 39.25 4.00
130 131 3.809832 CCAGAACAACACCTACTCAACAG 59.190 47.826 0.00 0.00 0.00 3.16
131 132 3.452990 TCCAGAACAACACCTACTCAACA 59.547 43.478 0.00 0.00 0.00 3.33
132 133 3.808174 GTCCAGAACAACACCTACTCAAC 59.192 47.826 0.00 0.00 0.00 3.18
133 134 3.452990 TGTCCAGAACAACACCTACTCAA 59.547 43.478 0.00 0.00 34.03 3.02
134 135 3.035363 TGTCCAGAACAACACCTACTCA 58.965 45.455 0.00 0.00 34.03 3.41
135 136 3.555168 CCTGTCCAGAACAACACCTACTC 60.555 52.174 0.00 0.00 37.45 2.59
136 137 2.368875 CCTGTCCAGAACAACACCTACT 59.631 50.000 0.00 0.00 37.45 2.57
137 138 2.550208 CCCTGTCCAGAACAACACCTAC 60.550 54.545 0.00 0.00 37.45 3.18
138 139 1.697432 CCCTGTCCAGAACAACACCTA 59.303 52.381 0.00 0.00 37.45 3.08
139 140 0.474184 CCCTGTCCAGAACAACACCT 59.526 55.000 0.00 0.00 37.45 4.00
140 141 0.182775 ACCCTGTCCAGAACAACACC 59.817 55.000 0.00 0.00 37.45 4.16
141 142 2.550208 CCTACCCTGTCCAGAACAACAC 60.550 54.545 0.00 0.00 37.45 3.32
142 143 1.697432 CCTACCCTGTCCAGAACAACA 59.303 52.381 0.00 0.00 37.45 3.33
143 144 1.975680 TCCTACCCTGTCCAGAACAAC 59.024 52.381 0.00 0.00 37.45 3.32
144 145 2.409064 TCCTACCCTGTCCAGAACAA 57.591 50.000 0.00 0.00 37.45 2.83
145 146 2.642171 ATCCTACCCTGTCCAGAACA 57.358 50.000 0.00 0.00 36.18 3.18
146 147 5.368989 CATTTATCCTACCCTGTCCAGAAC 58.631 45.833 0.00 0.00 0.00 3.01
147 148 4.141482 GCATTTATCCTACCCTGTCCAGAA 60.141 45.833 0.00 0.00 0.00 3.02
148 149 3.391296 GCATTTATCCTACCCTGTCCAGA 59.609 47.826 0.00 0.00 0.00 3.86
149 150 3.136443 TGCATTTATCCTACCCTGTCCAG 59.864 47.826 0.00 0.00 0.00 3.86
150 151 3.119319 TGCATTTATCCTACCCTGTCCA 58.881 45.455 0.00 0.00 0.00 4.02
151 152 3.857157 TGCATTTATCCTACCCTGTCC 57.143 47.619 0.00 0.00 0.00 4.02
152 153 4.022849 GCAATGCATTTATCCTACCCTGTC 60.023 45.833 9.83 0.00 0.00 3.51
153 154 3.891366 GCAATGCATTTATCCTACCCTGT 59.109 43.478 9.83 0.00 0.00 4.00
154 155 3.890756 TGCAATGCATTTATCCTACCCTG 59.109 43.478 9.83 0.00 31.71 4.45
155 156 3.891366 GTGCAATGCATTTATCCTACCCT 59.109 43.478 12.38 0.00 41.91 4.34
156 157 3.636300 TGTGCAATGCATTTATCCTACCC 59.364 43.478 12.38 0.00 41.91 3.69
157 158 4.916983 TGTGCAATGCATTTATCCTACC 57.083 40.909 12.38 0.00 41.91 3.18
158 159 6.506147 TCATTGTGCAATGCATTTATCCTAC 58.494 36.000 12.38 3.71 45.77 3.18
159 160 6.712179 TCATTGTGCAATGCATTTATCCTA 57.288 33.333 12.38 0.00 45.77 2.94
160 161 5.601583 TCATTGTGCAATGCATTTATCCT 57.398 34.783 12.38 0.00 45.77 3.24
161 162 6.092396 TGTTTCATTGTGCAATGCATTTATCC 59.908 34.615 12.38 0.00 45.77 2.59
162 163 7.062906 TGTTTCATTGTGCAATGCATTTATC 57.937 32.000 12.38 0.00 45.77 1.75
163 164 7.618502 ATGTTTCATTGTGCAATGCATTTAT 57.381 28.000 12.38 2.46 45.77 1.40
164 165 8.543862 TTATGTTTCATTGTGCAATGCATTTA 57.456 26.923 12.38 0.00 45.77 1.40
165 166 5.950758 ATGTTTCATTGTGCAATGCATTT 57.049 30.435 12.38 0.00 45.77 2.32
166 167 6.651643 ACTTATGTTTCATTGTGCAATGCATT 59.348 30.769 12.38 5.99 45.77 3.56
167 168 6.091577 CACTTATGTTTCATTGTGCAATGCAT 59.908 34.615 12.38 16.25 45.77 3.96
168 169 5.405873 CACTTATGTTTCATTGTGCAATGCA 59.594 36.000 17.36 2.72 45.77 3.96
169 170 5.669357 GCACTTATGTTTCATTGTGCAATGC 60.669 40.000 22.22 0.00 46.64 3.56
170 171 5.849858 GCACTTATGTTTCATTGTGCAATG 58.150 37.500 22.22 16.36 46.64 2.82
175 176 6.614160 TCATCAGCACTTATGTTTCATTGTG 58.386 36.000 0.00 9.43 0.00 3.33
176 177 6.432162 ACTCATCAGCACTTATGTTTCATTGT 59.568 34.615 0.00 0.00 0.00 2.71
177 178 6.849502 ACTCATCAGCACTTATGTTTCATTG 58.150 36.000 0.00 0.00 0.00 2.82
178 179 7.458409 AACTCATCAGCACTTATGTTTCATT 57.542 32.000 0.00 0.00 0.00 2.57
179 180 7.281774 CCTAACTCATCAGCACTTATGTTTCAT 59.718 37.037 0.00 0.00 0.00 2.57
180 181 6.595326 CCTAACTCATCAGCACTTATGTTTCA 59.405 38.462 0.00 0.00 0.00 2.69
181 182 6.818644 TCCTAACTCATCAGCACTTATGTTTC 59.181 38.462 0.00 0.00 0.00 2.78
182 183 6.711277 TCCTAACTCATCAGCACTTATGTTT 58.289 36.000 0.00 0.00 0.00 2.83
183 184 6.299805 TCCTAACTCATCAGCACTTATGTT 57.700 37.500 0.00 0.00 0.00 2.71
184 185 5.939764 TCCTAACTCATCAGCACTTATGT 57.060 39.130 0.00 0.00 0.00 2.29
185 186 5.236047 GCTTCCTAACTCATCAGCACTTATG 59.764 44.000 0.00 0.00 0.00 1.90
186 187 5.363939 GCTTCCTAACTCATCAGCACTTAT 58.636 41.667 0.00 0.00 0.00 1.73
187 188 4.383118 GGCTTCCTAACTCATCAGCACTTA 60.383 45.833 0.00 0.00 0.00 2.24
188 189 3.604582 GCTTCCTAACTCATCAGCACTT 58.395 45.455 0.00 0.00 0.00 3.16
189 190 2.093235 GGCTTCCTAACTCATCAGCACT 60.093 50.000 0.00 0.00 0.00 4.40
190 191 2.284190 GGCTTCCTAACTCATCAGCAC 58.716 52.381 0.00 0.00 0.00 4.40
191 192 1.210478 GGGCTTCCTAACTCATCAGCA 59.790 52.381 0.00 0.00 0.00 4.41
192 193 1.210478 TGGGCTTCCTAACTCATCAGC 59.790 52.381 0.00 0.00 0.00 4.26
193 194 2.744494 GCTGGGCTTCCTAACTCATCAG 60.744 54.545 0.00 0.00 0.00 2.90
194 195 1.210478 GCTGGGCTTCCTAACTCATCA 59.790 52.381 0.00 0.00 0.00 3.07
195 196 1.488393 AGCTGGGCTTCCTAACTCATC 59.512 52.381 0.00 0.00 33.89 2.92
196 197 1.211457 CAGCTGGGCTTCCTAACTCAT 59.789 52.381 5.57 0.00 36.40 2.90
197 198 0.615331 CAGCTGGGCTTCCTAACTCA 59.385 55.000 5.57 0.00 36.40 3.41
198 199 0.615850 ACAGCTGGGCTTCCTAACTC 59.384 55.000 19.93 0.00 36.40 3.01
199 200 0.326264 CACAGCTGGGCTTCCTAACT 59.674 55.000 19.93 0.00 36.40 2.24
200 201 0.036875 ACACAGCTGGGCTTCCTAAC 59.963 55.000 18.07 0.00 36.40 2.34
201 202 0.771127 AACACAGCTGGGCTTCCTAA 59.229 50.000 18.07 0.00 36.40 2.69
202 203 0.324943 GAACACAGCTGGGCTTCCTA 59.675 55.000 18.07 0.00 36.40 2.94
203 204 1.073897 GAACACAGCTGGGCTTCCT 59.926 57.895 18.07 0.00 36.40 3.36
204 205 1.228245 TGAACACAGCTGGGCTTCC 60.228 57.895 18.07 3.05 36.40 3.46
205 206 0.536006 ACTGAACACAGCTGGGCTTC 60.536 55.000 18.07 18.45 36.40 3.86
206 207 0.106519 AACTGAACACAGCTGGGCTT 60.107 50.000 18.07 9.81 36.40 4.35
207 208 0.536006 GAACTGAACACAGCTGGGCT 60.536 55.000 18.07 2.57 40.77 5.19
208 209 1.518903 GGAACTGAACACAGCTGGGC 61.519 60.000 18.07 0.22 35.31 5.36
209 210 0.179020 TGGAACTGAACACAGCTGGG 60.179 55.000 16.28 16.28 35.31 4.45
210 211 0.947244 GTGGAACTGAACACAGCTGG 59.053 55.000 19.93 9.66 37.54 4.85
211 212 0.583438 CGTGGAACTGAACACAGCTG 59.417 55.000 13.48 13.48 37.45 4.24
212 213 1.160329 GCGTGGAACTGAACACAGCT 61.160 55.000 0.00 0.00 37.45 4.24
213 214 1.279840 GCGTGGAACTGAACACAGC 59.720 57.895 0.00 0.00 37.45 4.40
214 215 1.564622 CGCGTGGAACTGAACACAG 59.435 57.895 0.00 0.00 37.45 3.66
215 216 1.885388 CCGCGTGGAACTGAACACA 60.885 57.895 10.20 0.00 37.45 3.72
216 217 2.935955 CCGCGTGGAACTGAACAC 59.064 61.111 10.20 0.00 37.49 3.32
217 218 2.089887 TAGCCGCGTGGAACTGAACA 62.090 55.000 21.76 0.00 37.49 3.18
218 219 0.947180 TTAGCCGCGTGGAACTGAAC 60.947 55.000 21.76 0.00 37.49 3.18
219 220 0.947180 GTTAGCCGCGTGGAACTGAA 60.947 55.000 21.76 1.11 37.49 3.02
220 221 1.373748 GTTAGCCGCGTGGAACTGA 60.374 57.895 21.76 0.44 37.49 3.41
221 222 1.019278 ATGTTAGCCGCGTGGAACTG 61.019 55.000 21.76 0.00 37.49 3.16
222 223 1.019278 CATGTTAGCCGCGTGGAACT 61.019 55.000 21.76 9.97 37.49 3.01
223 224 1.423845 CATGTTAGCCGCGTGGAAC 59.576 57.895 21.76 15.72 37.49 3.62
224 225 2.395360 GCATGTTAGCCGCGTGGAA 61.395 57.895 21.76 1.23 37.49 3.53
225 226 2.817834 GCATGTTAGCCGCGTGGA 60.818 61.111 21.76 0.00 37.49 4.02
226 227 1.157257 TATGCATGTTAGCCGCGTGG 61.157 55.000 11.67 11.67 38.77 4.94
227 228 0.233074 CTATGCATGTTAGCCGCGTG 59.767 55.000 10.16 0.00 0.00 5.34
228 229 1.498865 GCTATGCATGTTAGCCGCGT 61.499 55.000 10.16 0.00 36.82 6.01
229 230 1.205064 GCTATGCATGTTAGCCGCG 59.795 57.895 10.16 0.00 36.82 6.46
230 231 0.662619 TTGCTATGCATGTTAGCCGC 59.337 50.000 20.26 5.21 41.10 6.53
231 232 1.942657 ACTTGCTATGCATGTTAGCCG 59.057 47.619 20.26 15.44 42.78 5.52
232 233 2.033801 CCACTTGCTATGCATGTTAGCC 59.966 50.000 20.26 8.70 42.78 3.93
233 234 2.542411 GCCACTTGCTATGCATGTTAGC 60.542 50.000 10.16 11.35 42.78 3.09
234 235 2.684374 TGCCACTTGCTATGCATGTTAG 59.316 45.455 10.16 0.00 42.78 2.34
235 236 2.720915 TGCCACTTGCTATGCATGTTA 58.279 42.857 10.16 0.00 42.78 2.41
236 237 1.548081 TGCCACTTGCTATGCATGTT 58.452 45.000 10.16 0.00 42.78 2.71
237 238 1.548081 TTGCCACTTGCTATGCATGT 58.452 45.000 10.16 5.45 45.47 3.21
238 239 2.264813 GTTTGCCACTTGCTATGCATG 58.735 47.619 10.16 0.26 38.76 4.06
239 240 1.894466 TGTTTGCCACTTGCTATGCAT 59.106 42.857 3.79 3.79 38.76 3.96
240 241 1.000385 GTGTTTGCCACTTGCTATGCA 60.000 47.619 0.00 0.00 41.11 3.96
241 242 1.000385 TGTGTTTGCCACTTGCTATGC 60.000 47.619 0.00 0.00 44.81 3.14
242 243 3.057386 TGATGTGTTTGCCACTTGCTATG 60.057 43.478 0.00 0.00 44.81 2.23
243 244 3.156293 TGATGTGTTTGCCACTTGCTAT 58.844 40.909 0.00 0.00 44.81 2.97
244 245 2.580962 TGATGTGTTTGCCACTTGCTA 58.419 42.857 0.00 0.00 44.81 3.49
245 246 1.401761 TGATGTGTTTGCCACTTGCT 58.598 45.000 0.00 0.00 44.81 3.91
246 247 1.860326 GTTGATGTGTTTGCCACTTGC 59.140 47.619 0.00 0.00 44.81 4.01
247 248 3.162202 TGTTGATGTGTTTGCCACTTG 57.838 42.857 0.00 0.00 44.81 3.16
248 249 3.195396 AGTTGTTGATGTGTTTGCCACTT 59.805 39.130 0.00 0.00 44.81 3.16
249 250 2.760092 AGTTGTTGATGTGTTTGCCACT 59.240 40.909 0.00 0.00 44.81 4.00
250 251 3.115554 GAGTTGTTGATGTGTTTGCCAC 58.884 45.455 0.00 0.00 44.78 5.01
251 252 2.100584 GGAGTTGTTGATGTGTTTGCCA 59.899 45.455 0.00 0.00 0.00 4.92
252 253 2.545742 GGGAGTTGTTGATGTGTTTGCC 60.546 50.000 0.00 0.00 0.00 4.52
253 254 2.545742 GGGGAGTTGTTGATGTGTTTGC 60.546 50.000 0.00 0.00 0.00 3.68
254 255 2.035832 GGGGGAGTTGTTGATGTGTTTG 59.964 50.000 0.00 0.00 0.00 2.93
255 256 2.316108 GGGGGAGTTGTTGATGTGTTT 58.684 47.619 0.00 0.00 0.00 2.83
256 257 1.995376 GGGGGAGTTGTTGATGTGTT 58.005 50.000 0.00 0.00 0.00 3.32
257 258 3.745723 GGGGGAGTTGTTGATGTGT 57.254 52.632 0.00 0.00 0.00 3.72
275 276 4.358841 TGGTTGGGTGGCATCCGG 62.359 66.667 13.09 0.00 0.00 5.14
276 277 3.061848 GTGGTTGGGTGGCATCCG 61.062 66.667 13.09 0.00 0.00 4.18
277 278 0.831711 AAAGTGGTTGGGTGGCATCC 60.832 55.000 10.69 10.69 0.00 3.51
278 279 1.047801 AAAAGTGGTTGGGTGGCATC 58.952 50.000 0.00 0.00 0.00 3.91
279 280 0.758123 CAAAAGTGGTTGGGTGGCAT 59.242 50.000 0.00 0.00 0.00 4.40
280 281 0.324738 TCAAAAGTGGTTGGGTGGCA 60.325 50.000 0.00 0.00 0.00 4.92
281 282 0.827368 TTCAAAAGTGGTTGGGTGGC 59.173 50.000 0.00 0.00 0.00 5.01
282 283 2.433970 ACATTCAAAAGTGGTTGGGTGG 59.566 45.455 0.00 0.00 0.00 4.61
283 284 3.817709 ACATTCAAAAGTGGTTGGGTG 57.182 42.857 0.00 0.00 0.00 4.61
284 285 3.181480 CGAACATTCAAAAGTGGTTGGGT 60.181 43.478 0.00 0.00 0.00 4.51
285 286 3.067461 TCGAACATTCAAAAGTGGTTGGG 59.933 43.478 0.00 0.00 0.00 4.12
286 287 4.300189 TCGAACATTCAAAAGTGGTTGG 57.700 40.909 0.00 0.00 0.00 3.77
287 288 6.826893 AATTCGAACATTCAAAAGTGGTTG 57.173 33.333 0.00 0.00 0.00 3.77
288 289 7.547370 TCAAAATTCGAACATTCAAAAGTGGTT 59.453 29.630 0.00 0.00 0.00 3.67
289 290 7.038659 TCAAAATTCGAACATTCAAAAGTGGT 58.961 30.769 0.00 0.00 0.00 4.16
290 291 7.462109 TCAAAATTCGAACATTCAAAAGTGG 57.538 32.000 0.00 0.00 0.00 4.00
291 292 8.379161 TGTTCAAAATTCGAACATTCAAAAGTG 58.621 29.630 15.72 0.00 45.85 3.16
292 293 8.472683 TGTTCAAAATTCGAACATTCAAAAGT 57.527 26.923 15.72 0.00 45.85 2.66
302 303 3.179599 CCGTGCTTGTTCAAAATTCGAAC 59.820 43.478 0.00 11.82 42.52 3.95
303 304 3.367607 CCGTGCTTGTTCAAAATTCGAA 58.632 40.909 0.00 0.00 0.00 3.71
304 305 2.287308 CCCGTGCTTGTTCAAAATTCGA 60.287 45.455 0.00 0.00 0.00 3.71
305 306 2.050691 CCCGTGCTTGTTCAAAATTCG 58.949 47.619 0.00 0.00 0.00 3.34
306 307 3.308530 CTCCCGTGCTTGTTCAAAATTC 58.691 45.455 0.00 0.00 0.00 2.17
307 308 2.035832 CCTCCCGTGCTTGTTCAAAATT 59.964 45.455 0.00 0.00 0.00 1.82
308 309 1.613437 CCTCCCGTGCTTGTTCAAAAT 59.387 47.619 0.00 0.00 0.00 1.82
309 310 1.028905 CCTCCCGTGCTTGTTCAAAA 58.971 50.000 0.00 0.00 0.00 2.44
310 311 0.821711 CCCTCCCGTGCTTGTTCAAA 60.822 55.000 0.00 0.00 0.00 2.69
311 312 1.228124 CCCTCCCGTGCTTGTTCAA 60.228 57.895 0.00 0.00 0.00 2.69
312 313 2.429930 CCCTCCCGTGCTTGTTCA 59.570 61.111 0.00 0.00 0.00 3.18
313 314 2.359975 CCCCTCCCGTGCTTGTTC 60.360 66.667 0.00 0.00 0.00 3.18
314 315 2.763645 AACCCCTCCCGTGCTTGTT 61.764 57.895 0.00 0.00 0.00 2.83
315 316 3.175710 AACCCCTCCCGTGCTTGT 61.176 61.111 0.00 0.00 0.00 3.16
316 317 2.672996 CAACCCCTCCCGTGCTTG 60.673 66.667 0.00 0.00 0.00 4.01
317 318 3.175710 ACAACCCCTCCCGTGCTT 61.176 61.111 0.00 0.00 0.00 3.91
318 319 3.953775 CACAACCCCTCCCGTGCT 61.954 66.667 0.00 0.00 0.00 4.40
319 320 3.901797 CTCACAACCCCTCCCGTGC 62.902 68.421 0.00 0.00 0.00 5.34
320 321 2.347490 CTCACAACCCCTCCCGTG 59.653 66.667 0.00 0.00 0.00 4.94
321 322 3.637273 GCTCACAACCCCTCCCGT 61.637 66.667 0.00 0.00 0.00 5.28
322 323 3.612247 CTGCTCACAACCCCTCCCG 62.612 68.421 0.00 0.00 0.00 5.14
323 324 2.352805 CTGCTCACAACCCCTCCC 59.647 66.667 0.00 0.00 0.00 4.30
324 325 2.352805 CCTGCTCACAACCCCTCC 59.647 66.667 0.00 0.00 0.00 4.30
325 326 2.352805 CCCTGCTCACAACCCCTC 59.647 66.667 0.00 0.00 0.00 4.30
326 327 3.260100 CCCCTGCTCACAACCCCT 61.260 66.667 0.00 0.00 0.00 4.79
327 328 4.366684 CCCCCTGCTCACAACCCC 62.367 72.222 0.00 0.00 0.00 4.95
341 342 2.565834 ACGCTCATATATGTACACCCCC 59.434 50.000 12.42 0.00 0.00 5.40
342 343 3.955650 ACGCTCATATATGTACACCCC 57.044 47.619 12.42 0.00 0.00 4.95
343 344 5.348986 CCATACGCTCATATATGTACACCC 58.651 45.833 12.42 0.00 0.00 4.61
344 345 4.804139 GCCATACGCTCATATATGTACACC 59.196 45.833 12.42 0.00 0.00 4.16
345 346 4.499399 CGCCATACGCTCATATATGTACAC 59.501 45.833 12.42 0.79 34.21 2.90
346 347 4.439563 CCGCCATACGCTCATATATGTACA 60.440 45.833 12.42 0.00 41.76 2.90
347 348 4.042398 CCGCCATACGCTCATATATGTAC 58.958 47.826 12.42 5.33 41.76 2.90
348 349 3.490249 GCCGCCATACGCTCATATATGTA 60.490 47.826 12.42 0.00 41.76 2.29
349 350 2.738643 GCCGCCATACGCTCATATATGT 60.739 50.000 12.42 0.00 41.76 2.29
350 351 1.860950 GCCGCCATACGCTCATATATG 59.139 52.381 6.36 6.36 41.76 1.78
351 352 1.202533 GGCCGCCATACGCTCATATAT 60.203 52.381 3.91 0.00 41.76 0.86
352 353 0.174845 GGCCGCCATACGCTCATATA 59.825 55.000 3.91 0.00 41.76 0.86
353 354 1.079127 GGCCGCCATACGCTCATAT 60.079 57.895 3.91 0.00 41.76 1.78
354 355 2.342279 GGCCGCCATACGCTCATA 59.658 61.111 3.91 0.00 41.76 2.15
355 356 4.626081 GGGCCGCCATACGCTCAT 62.626 66.667 12.58 0.00 41.76 2.90
359 360 4.626081 ATCTGGGCCGCCATACGC 62.626 66.667 12.58 0.00 41.76 4.42
360 361 2.666190 CATCTGGGCCGCCATACG 60.666 66.667 12.58 0.00 43.15 3.06
361 362 2.281761 CCATCTGGGCCGCCATAC 60.282 66.667 12.58 0.00 0.00 2.39
362 363 2.447572 TCCATCTGGGCCGCCATA 60.448 61.111 12.58 0.00 36.21 2.74
363 364 3.882326 CTCCATCTGGGCCGCCAT 61.882 66.667 12.58 0.00 36.21 4.40
365 366 4.864334 CACTCCATCTGGGCCGCC 62.864 72.222 0.00 0.00 36.21 6.13
366 367 3.785859 TCACTCCATCTGGGCCGC 61.786 66.667 0.00 0.00 36.21 6.53
367 368 2.187946 GTCACTCCATCTGGGCCG 59.812 66.667 0.00 0.00 36.21 6.13
368 369 2.592308 GGTCACTCCATCTGGGCC 59.408 66.667 0.00 0.00 36.21 5.80
369 370 2.592308 GGGTCACTCCATCTGGGC 59.408 66.667 0.00 0.00 38.11 5.36
370 371 1.961180 GACGGGTCACTCCATCTGGG 61.961 65.000 0.00 0.00 38.11 4.45
371 372 1.517832 GACGGGTCACTCCATCTGG 59.482 63.158 0.00 0.00 38.11 3.86
372 373 1.139734 CGACGGGTCACTCCATCTG 59.860 63.158 0.00 0.00 38.11 2.90
373 374 2.052690 CCGACGGGTCACTCCATCT 61.053 63.158 5.81 0.00 38.11 2.90
374 375 2.348888 ACCGACGGGTCACTCCATC 61.349 63.158 20.00 0.00 46.01 3.51
375 376 2.283676 ACCGACGGGTCACTCCAT 60.284 61.111 20.00 0.00 46.01 3.41
384 385 0.739813 CTTTTAGCAGGACCGACGGG 60.740 60.000 20.00 0.56 40.11 5.28
385 386 1.359459 GCTTTTAGCAGGACCGACGG 61.359 60.000 13.61 13.61 41.89 4.79
386 387 1.359459 GGCTTTTAGCAGGACCGACG 61.359 60.000 0.67 0.00 44.75 5.12
387 388 1.359459 CGGCTTTTAGCAGGACCGAC 61.359 60.000 0.67 0.00 44.75 4.79
388 389 1.079405 CGGCTTTTAGCAGGACCGA 60.079 57.895 0.67 0.00 44.75 4.69
389 390 3.486263 CGGCTTTTAGCAGGACCG 58.514 61.111 0.67 0.00 44.75 4.79
394 395 0.678048 AGAAGGCCGGCTTTTAGCAG 60.678 55.000 25.90 0.00 44.75 4.24
395 396 0.616371 TAGAAGGCCGGCTTTTAGCA 59.384 50.000 25.90 8.03 44.75 3.49
396 397 1.671328 CTTAGAAGGCCGGCTTTTAGC 59.329 52.381 25.90 12.73 41.46 3.09
397 398 2.937149 GTCTTAGAAGGCCGGCTTTTAG 59.063 50.000 25.90 20.71 0.00 1.85
398 399 2.355412 GGTCTTAGAAGGCCGGCTTTTA 60.355 50.000 25.90 15.64 41.61 1.52
399 400 1.613520 GGTCTTAGAAGGCCGGCTTTT 60.614 52.381 25.90 19.97 41.61 2.27
400 401 0.035343 GGTCTTAGAAGGCCGGCTTT 60.035 55.000 25.45 25.45 41.61 3.51
401 402 1.602771 GGTCTTAGAAGGCCGGCTT 59.397 57.895 28.56 18.19 41.61 4.35
402 403 3.310652 GGTCTTAGAAGGCCGGCT 58.689 61.111 28.56 7.30 41.61 5.52
406 407 9.801192 ATAGGTCTACTACGGTCTTAGAAGGCC 62.801 48.148 2.62 2.62 39.33 5.19
407 408 3.314913 GGTCTACTACGGTCTTAGAAGGC 59.685 52.174 1.36 0.00 0.00 4.35
408 409 4.779696 AGGTCTACTACGGTCTTAGAAGG 58.220 47.826 1.36 0.00 0.00 3.46
409 410 7.331687 GCTATAGGTCTACTACGGTCTTAGAAG 59.668 44.444 1.04 0.00 33.70 2.85
410 411 7.158021 GCTATAGGTCTACTACGGTCTTAGAA 58.842 42.308 1.04 0.00 33.70 2.10
411 412 6.571344 CGCTATAGGTCTACTACGGTCTTAGA 60.571 46.154 1.04 0.00 33.70 2.10
412 413 5.576384 CGCTATAGGTCTACTACGGTCTTAG 59.424 48.000 1.04 0.00 33.70 2.18
413 414 5.011125 ACGCTATAGGTCTACTACGGTCTTA 59.989 44.000 1.04 0.00 33.70 2.10
414 415 4.202305 ACGCTATAGGTCTACTACGGTCTT 60.202 45.833 1.04 0.00 33.70 3.01
415 416 3.323403 ACGCTATAGGTCTACTACGGTCT 59.677 47.826 1.04 0.00 33.70 3.85
416 417 3.658709 ACGCTATAGGTCTACTACGGTC 58.341 50.000 1.04 0.00 33.70 4.79
417 418 3.760580 ACGCTATAGGTCTACTACGGT 57.239 47.619 1.04 0.00 33.70 4.83
418 419 3.188048 CCAACGCTATAGGTCTACTACGG 59.812 52.174 1.04 0.00 33.70 4.02
419 420 3.188048 CCCAACGCTATAGGTCTACTACG 59.812 52.174 1.04 0.00 33.70 3.51
420 421 3.057666 GCCCAACGCTATAGGTCTACTAC 60.058 52.174 1.04 0.00 33.70 2.73
421 422 3.152341 GCCCAACGCTATAGGTCTACTA 58.848 50.000 1.04 0.00 35.80 1.82
422 423 1.962100 GCCCAACGCTATAGGTCTACT 59.038 52.381 1.04 0.00 0.00 2.57
423 424 1.000618 GGCCCAACGCTATAGGTCTAC 59.999 57.143 1.04 0.00 37.74 2.59
424 425 1.133262 AGGCCCAACGCTATAGGTCTA 60.133 52.381 0.00 0.00 30.91 2.59
425 426 0.398664 AGGCCCAACGCTATAGGTCT 60.399 55.000 0.00 0.00 37.74 3.85
426 427 0.033642 GAGGCCCAACGCTATAGGTC 59.966 60.000 0.00 0.00 37.74 3.85
427 428 0.689745 TGAGGCCCAACGCTATAGGT 60.690 55.000 0.00 0.00 37.74 3.08
428 429 0.687354 ATGAGGCCCAACGCTATAGG 59.313 55.000 0.00 0.00 37.74 2.57
429 430 3.678056 TTATGAGGCCCAACGCTATAG 57.322 47.619 0.00 0.00 37.74 1.31
430 431 4.634012 AATTATGAGGCCCAACGCTATA 57.366 40.909 0.00 0.00 37.74 1.31
431 432 3.508845 AATTATGAGGCCCAACGCTAT 57.491 42.857 0.00 0.00 37.74 2.97
432 433 4.131596 GTTAATTATGAGGCCCAACGCTA 58.868 43.478 0.00 0.00 37.74 4.26
433 434 2.949644 GTTAATTATGAGGCCCAACGCT 59.050 45.455 0.00 0.00 37.74 5.07
434 435 2.685897 TGTTAATTATGAGGCCCAACGC 59.314 45.455 0.00 0.00 0.00 4.84
435 436 4.974368 TTGTTAATTATGAGGCCCAACG 57.026 40.909 0.00 0.00 0.00 4.10
436 437 6.811665 GTCTTTTGTTAATTATGAGGCCCAAC 59.188 38.462 0.00 0.00 0.00 3.77
437 438 6.495181 TGTCTTTTGTTAATTATGAGGCCCAA 59.505 34.615 0.00 0.00 0.00 4.12
438 439 6.013379 TGTCTTTTGTTAATTATGAGGCCCA 58.987 36.000 0.00 0.00 0.00 5.36
439 440 6.524101 TGTCTTTTGTTAATTATGAGGCCC 57.476 37.500 0.00 0.00 0.00 5.80
440 441 7.602753 ACTTGTCTTTTGTTAATTATGAGGCC 58.397 34.615 0.00 0.00 0.00 5.19
441 442 8.515414 AGACTTGTCTTTTGTTAATTATGAGGC 58.485 33.333 0.00 0.00 0.00 4.70
443 444 9.746711 CGAGACTTGTCTTTTGTTAATTATGAG 57.253 33.333 4.67 0.00 0.00 2.90
444 445 9.268268 ACGAGACTTGTCTTTTGTTAATTATGA 57.732 29.630 4.67 0.00 0.00 2.15
445 446 9.878599 AACGAGACTTGTCTTTTGTTAATTATG 57.121 29.630 4.67 0.00 0.00 1.90
446 447 9.878599 CAACGAGACTTGTCTTTTGTTAATTAT 57.121 29.630 4.67 0.00 0.00 1.28
447 448 7.853929 GCAACGAGACTTGTCTTTTGTTAATTA 59.146 33.333 18.69 0.00 0.00 1.40
448 449 6.691388 GCAACGAGACTTGTCTTTTGTTAATT 59.309 34.615 18.69 0.00 0.00 1.40
449 450 6.038271 AGCAACGAGACTTGTCTTTTGTTAAT 59.962 34.615 18.69 9.31 0.00 1.40
450 451 5.353123 AGCAACGAGACTTGTCTTTTGTTAA 59.647 36.000 18.69 0.00 0.00 2.01
451 452 4.873827 AGCAACGAGACTTGTCTTTTGTTA 59.126 37.500 18.69 0.00 0.00 2.41
452 453 3.689649 AGCAACGAGACTTGTCTTTTGTT 59.310 39.130 18.69 14.40 0.00 2.83
453 454 3.270877 AGCAACGAGACTTGTCTTTTGT 58.729 40.909 18.69 10.81 0.00 2.83
454 455 3.951979 AGCAACGAGACTTGTCTTTTG 57.048 42.857 15.73 15.73 0.00 2.44
455 456 4.508124 CAGTAGCAACGAGACTTGTCTTTT 59.492 41.667 4.67 0.00 0.00 2.27
456 457 4.051922 CAGTAGCAACGAGACTTGTCTTT 58.948 43.478 4.67 0.00 0.00 2.52
457 458 3.068307 ACAGTAGCAACGAGACTTGTCTT 59.932 43.478 4.67 0.00 0.00 3.01
458 459 2.623889 ACAGTAGCAACGAGACTTGTCT 59.376 45.455 2.59 2.59 0.00 3.41
459 460 2.726760 CACAGTAGCAACGAGACTTGTC 59.273 50.000 0.00 0.00 0.00 3.18
460 461 2.743938 CACAGTAGCAACGAGACTTGT 58.256 47.619 0.00 0.00 0.00 3.16
461 462 1.457303 GCACAGTAGCAACGAGACTTG 59.543 52.381 0.00 0.00 0.00 3.16
462 463 1.341531 AGCACAGTAGCAACGAGACTT 59.658 47.619 0.00 0.00 36.85 3.01
463 464 0.962489 AGCACAGTAGCAACGAGACT 59.038 50.000 0.00 0.00 36.85 3.24
464 465 1.335964 TGAGCACAGTAGCAACGAGAC 60.336 52.381 0.00 0.00 36.85 3.36
465 466 0.958822 TGAGCACAGTAGCAACGAGA 59.041 50.000 0.00 0.00 36.85 4.04
466 467 1.783284 TTGAGCACAGTAGCAACGAG 58.217 50.000 0.00 0.00 36.85 4.18
467 468 2.455674 ATTGAGCACAGTAGCAACGA 57.544 45.000 0.00 0.00 36.85 3.85
468 469 2.480037 TGAATTGAGCACAGTAGCAACG 59.520 45.455 0.00 0.00 36.85 4.10
469 470 4.691860 ATGAATTGAGCACAGTAGCAAC 57.308 40.909 0.00 0.00 36.85 4.17
470 471 4.082625 CCAATGAATTGAGCACAGTAGCAA 60.083 41.667 4.58 0.00 40.14 3.91
471 472 3.441222 CCAATGAATTGAGCACAGTAGCA 59.559 43.478 4.58 0.00 40.14 3.49
472 473 3.733077 GCCAATGAATTGAGCACAGTAGC 60.733 47.826 4.58 0.00 40.14 3.58
473 474 3.441222 TGCCAATGAATTGAGCACAGTAG 59.559 43.478 12.32 0.00 40.14 2.57
474 475 3.419943 TGCCAATGAATTGAGCACAGTA 58.580 40.909 12.32 0.00 40.14 2.74
475 476 2.241160 TGCCAATGAATTGAGCACAGT 58.759 42.857 12.32 0.00 40.14 3.55
476 477 3.306917 TTGCCAATGAATTGAGCACAG 57.693 42.857 14.67 0.00 40.79 3.66
477 478 3.655486 CTTTGCCAATGAATTGAGCACA 58.345 40.909 14.67 10.05 40.79 4.57
478 479 2.414138 GCTTTGCCAATGAATTGAGCAC 59.586 45.455 14.67 5.08 40.79 4.40
479 480 2.300723 AGCTTTGCCAATGAATTGAGCA 59.699 40.909 13.66 13.00 40.01 4.26
480 481 2.671396 CAGCTTTGCCAATGAATTGAGC 59.329 45.455 4.58 5.64 40.14 4.26
481 482 4.182693 TCAGCTTTGCCAATGAATTGAG 57.817 40.909 4.58 0.00 40.14 3.02
482 483 4.603989 TTCAGCTTTGCCAATGAATTGA 57.396 36.364 4.58 0.00 40.14 2.57
483 484 5.870433 TGTATTCAGCTTTGCCAATGAATTG 59.130 36.000 9.36 0.00 41.38 2.32
484 485 6.040209 TGTATTCAGCTTTGCCAATGAATT 57.960 33.333 9.36 0.00 41.38 2.17
485 486 5.664294 TGTATTCAGCTTTGCCAATGAAT 57.336 34.783 9.12 9.12 43.08 2.57
486 487 5.664294 ATGTATTCAGCTTTGCCAATGAA 57.336 34.783 0.00 0.00 36.22 2.57
487 488 6.736519 GCATATGTATTCAGCTTTGCCAATGA 60.737 38.462 4.29 0.00 0.00 2.57
488 489 5.404366 GCATATGTATTCAGCTTTGCCAATG 59.596 40.000 4.29 0.00 0.00 2.82
489 490 5.069383 TGCATATGTATTCAGCTTTGCCAAT 59.931 36.000 4.29 0.00 0.00 3.16
490 491 4.401837 TGCATATGTATTCAGCTTTGCCAA 59.598 37.500 4.29 0.00 0.00 4.52
491 492 3.952967 TGCATATGTATTCAGCTTTGCCA 59.047 39.130 4.29 0.00 0.00 4.92
492 493 4.572985 TGCATATGTATTCAGCTTTGCC 57.427 40.909 4.29 0.00 0.00 4.52
493 494 8.453320 TGTATATGCATATGTATTCAGCTTTGC 58.547 33.333 26.21 3.30 0.00 3.68
512 513 1.994779 TCTCGCGCATGCATGTATATG 59.005 47.619 26.79 14.80 42.97 1.78
513 514 2.368655 TCTCGCGCATGCATGTATAT 57.631 45.000 26.79 0.00 42.97 0.86
514 515 2.147436 TTCTCGCGCATGCATGTATA 57.853 45.000 26.79 10.19 42.97 1.47
515 516 1.462283 GATTCTCGCGCATGCATGTAT 59.538 47.619 26.79 9.75 42.97 2.29
516 517 0.861185 GATTCTCGCGCATGCATGTA 59.139 50.000 26.79 10.19 42.97 2.29
517 518 0.812811 AGATTCTCGCGCATGCATGT 60.813 50.000 26.79 5.18 42.97 3.21
518 519 0.110778 GAGATTCTCGCGCATGCATG 60.111 55.000 22.70 22.70 42.97 4.06
519 520 1.554891 CGAGATTCTCGCGCATGCAT 61.555 55.000 21.92 1.49 46.75 3.96
520 521 2.232974 CGAGATTCTCGCGCATGCA 61.233 57.895 21.92 0.00 46.75 3.96
521 522 2.543383 CGAGATTCTCGCGCATGC 59.457 61.111 21.92 7.91 46.75 4.06
536 537 1.303398 AGTCCTTGCTCGTCCTCGA 60.303 57.895 0.00 0.00 44.12 4.04
537 538 1.153939 CAGTCCTTGCTCGTCCTCG 60.154 63.158 0.00 0.00 38.55 4.63
538 539 1.216710 CCAGTCCTTGCTCGTCCTC 59.783 63.158 0.00 0.00 0.00 3.71
539 540 2.286523 CCCAGTCCTTGCTCGTCCT 61.287 63.158 0.00 0.00 0.00 3.85
540 541 1.617947 ATCCCAGTCCTTGCTCGTCC 61.618 60.000 0.00 0.00 0.00 4.79
541 542 1.112113 TATCCCAGTCCTTGCTCGTC 58.888 55.000 0.00 0.00 0.00 4.20
542 543 1.568504 TTATCCCAGTCCTTGCTCGT 58.431 50.000 0.00 0.00 0.00 4.18
543 544 2.918712 ATTATCCCAGTCCTTGCTCG 57.081 50.000 0.00 0.00 0.00 5.03
544 545 4.965200 ACTATTATCCCAGTCCTTGCTC 57.035 45.455 0.00 0.00 0.00 4.26
545 546 4.593634 GGTACTATTATCCCAGTCCTTGCT 59.406 45.833 0.00 0.00 0.00 3.91
546 547 4.347000 TGGTACTATTATCCCAGTCCTTGC 59.653 45.833 0.00 0.00 0.00 4.01
547 548 6.688073 ATGGTACTATTATCCCAGTCCTTG 57.312 41.667 0.00 0.00 0.00 3.61
548 549 9.716556 CTATATGGTACTATTATCCCAGTCCTT 57.283 37.037 0.00 0.00 0.00 3.36
549 550 8.857997 ACTATATGGTACTATTATCCCAGTCCT 58.142 37.037 0.00 0.00 0.00 3.85
574 575 9.463443 GCAAAAATTCAATATGGGTCATACTAC 57.537 33.333 0.00 0.00 0.00 2.73
575 576 9.420118 AGCAAAAATTCAATATGGGTCATACTA 57.580 29.630 0.00 0.00 0.00 1.82
576 577 8.310122 AGCAAAAATTCAATATGGGTCATACT 57.690 30.769 0.00 0.00 0.00 2.12
631 632 2.420687 GCCTGACTCCACCCTCTTTATG 60.421 54.545 0.00 0.00 0.00 1.90
632 633 1.840635 GCCTGACTCCACCCTCTTTAT 59.159 52.381 0.00 0.00 0.00 1.40
636 637 2.284995 GGCCTGACTCCACCCTCT 60.285 66.667 0.00 0.00 0.00 3.69
793 794 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
795 796 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
797 798 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
799 800 0.454285 GCACACACACACACACACAC 60.454 55.000 0.00 0.00 0.00 3.82
801 802 1.225991 CGCACACACACACACACAC 60.226 57.895 0.00 0.00 0.00 3.82
802 803 3.033166 GCGCACACACACACACACA 62.033 57.895 0.30 0.00 0.00 3.72
804 805 3.858989 CGCGCACACACACACACA 61.859 61.111 8.75 0.00 0.00 3.72
823 824 5.145059 ACATATATATATAGACACGCGCGC 58.855 41.667 32.58 23.91 0.00 6.86
824 825 7.508134 ACTACATATATATATAGACACGCGCG 58.492 38.462 30.96 30.96 0.00 6.86
826 827 9.513554 CGAACTACATATATATATAGACACGCG 57.486 37.037 13.78 3.53 0.00 6.01
904 935 5.360649 AGCTCTATTGGGGAGAAGTAAAC 57.639 43.478 0.00 0.00 33.03 2.01
1014 1045 4.339247 ACAGCAATAACAGAAGCAACAACT 59.661 37.500 0.00 0.00 0.00 3.16
1016 1047 4.916983 ACAGCAATAACAGAAGCAACAA 57.083 36.364 0.00 0.00 0.00 2.83
1019 1050 3.888323 TCCAACAGCAATAACAGAAGCAA 59.112 39.130 0.00 0.00 0.00 3.91
1127 1158 6.154021 ACCTCGTATTTTACCTTCTGCTTCTA 59.846 38.462 0.00 0.00 0.00 2.10
1153 1184 9.657121 CATAAAAGCTAGACTAAGCAATAAAGC 57.343 33.333 0.00 0.00 45.30 3.51
1218 1249 5.666462 ACAAAAGGGTTCGCAAATAAAAGT 58.334 33.333 0.00 0.00 0.00 2.66
1306 1341 8.853126 TGATATAATTGGAATTGAGGAAGCAAG 58.147 33.333 0.00 0.00 0.00 4.01
1386 1421 6.875469 TCCTAGAATGGGGTATTATCAGTCT 58.125 40.000 0.00 0.00 37.33 3.24
1390 1425 5.046591 CGCTTCCTAGAATGGGGTATTATCA 60.047 44.000 0.00 0.00 37.33 2.15
1531 1566 5.977725 GGTGAAAGACTTCCTTTGTTAAAGC 59.022 40.000 0.00 0.00 44.63 3.51
1532 1567 6.199393 CGGTGAAAGACTTCCTTTGTTAAAG 58.801 40.000 0.00 0.00 44.63 1.85
1641 1678 7.010738 ACAAAGTTTTTCGATCACTTACTTCGA 59.989 33.333 5.18 0.00 39.88 3.71
1677 1714 9.812347 CATATGCTCTCCTCTTATAGATAGGAT 57.188 37.037 0.00 0.00 38.70 3.24
1937 1979 5.813080 TCAGAAGTAATTCGTCGAGATCA 57.187 39.130 0.00 0.00 0.00 2.92
2026 2068 7.861629 TGGTCTCACATTCTTGGTTTATAGAT 58.138 34.615 0.00 0.00 0.00 1.98
2127 2169 7.462571 AGCTATTTCTGGTTTAAATTCGGTT 57.537 32.000 0.00 0.00 0.00 4.44


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.