Multiple sequence alignment - TraesCS7B01G337400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G337400 chr7B 100.000 2480 0 0 1 2480 592349350 592346871 0.000000e+00 4580.0
1 TraesCS7B01G337400 chr7B 88.874 1456 99 32 793 2192 591949318 591950766 0.000000e+00 1733.0
2 TraesCS7B01G337400 chr7B 93.689 713 36 5 779 1483 591723707 591724418 0.000000e+00 1059.0
3 TraesCS7B01G337400 chr7B 89.899 693 49 8 800 1481 591713253 591713935 0.000000e+00 872.0
4 TraesCS7B01G337400 chr7B 87.160 257 18 9 1557 1799 592354861 592354606 6.760000e-71 278.0
5 TraesCS7B01G337400 chr7B 92.949 156 9 2 2325 2480 680207721 680207874 2.480000e-55 226.0
6 TraesCS7B01G337400 chr7B 93.377 151 10 0 2330 2480 327153155 327153005 8.930000e-55 224.0
7 TraesCS7B01G337400 chr7B 100.000 86 0 0 2246 2331 591951108 591951193 2.550000e-35 159.0
8 TraesCS7B01G337400 chr7D 93.813 986 48 8 773 1755 548776830 548775855 0.000000e+00 1471.0
9 TraesCS7B01G337400 chr7D 92.154 701 42 6 794 1483 548708853 548709551 0.000000e+00 977.0
10 TraesCS7B01G337400 chr7D 91.181 703 38 9 781 1483 548782241 548781563 0.000000e+00 933.0
11 TraesCS7B01G337400 chr7D 89.640 695 51 8 800 1483 548696962 548697646 0.000000e+00 865.0
12 TraesCS7B01G337400 chr7D 86.737 377 45 5 324 697 39174652 39175026 4.930000e-112 414.0
13 TraesCS7B01G337400 chr7D 94.079 152 9 0 2329 2480 392753322 392753171 5.330000e-57 231.0
14 TraesCS7B01G337400 chr7D 84.651 215 33 0 1 215 548779639 548779425 5.370000e-52 215.0
15 TraesCS7B01G337400 chr7D 81.915 188 16 4 1557 1734 548781552 548781373 2.570000e-30 143.0
16 TraesCS7B01G337400 chr7D 92.000 100 8 0 320 419 22543378 22543477 9.250000e-30 141.0
17 TraesCS7B01G337400 chr7A 89.267 1118 86 15 744 1829 632551369 632550254 0.000000e+00 1369.0
18 TraesCS7B01G337400 chr7A 86.865 1043 64 26 800 1798 632526436 632527449 0.000000e+00 1099.0
19 TraesCS7B01G337400 chr7A 92.472 704 39 5 781 1484 632531888 632532577 0.000000e+00 994.0
20 TraesCS7B01G337400 chr7A 94.631 149 8 0 2332 2480 722081651 722081503 5.330000e-57 231.0
21 TraesCS7B01G337400 chr7A 92.453 159 11 1 2322 2480 647918896 647918739 2.480000e-55 226.0
22 TraesCS7B01G337400 chr7A 83.254 209 24 3 1560 1765 632581230 632581030 5.450000e-42 182.0
23 TraesCS7B01G337400 chr7A 83.140 172 28 1 1 172 632553753 632553583 3.300000e-34 156.0
24 TraesCS7B01G337400 chr6A 96.644 149 3 1 2332 2480 376877234 376877088 1.900000e-61 246.0
25 TraesCS7B01G337400 chr5D 95.270 148 4 3 2336 2480 217976740 217976593 5.330000e-57 231.0
26 TraesCS7B01G337400 chr3A 93.082 159 10 1 2322 2480 594019532 594019689 5.330000e-57 231.0
27 TraesCS7B01G337400 chr3A 91.975 162 11 2 2320 2480 365248402 365248562 2.480000e-55 226.0
28 TraesCS7B01G337400 chr2B 82.937 252 37 3 324 571 138532552 138532801 3.210000e-54 222.0
29 TraesCS7B01G337400 chr5A 81.609 261 40 6 316 574 495330028 495330282 2.500000e-50 209.0
30 TraesCS7B01G337400 chr5A 75.328 381 80 11 326 698 677907914 677907540 1.180000e-38 171.0
31 TraesCS7B01G337400 chr5A 100.000 28 0 0 670 697 661674183 661674210 4.000000e-03 52.8
32 TraesCS7B01G337400 chr4A 76.292 329 59 14 320 638 718069506 718069825 9.180000e-35 158.0
33 TraesCS7B01G337400 chr4B 77.551 147 28 4 345 489 532797335 532797192 1.580000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G337400 chr7B 592346871 592349350 2479 True 4580.0 4580 100.0000 1 2480 1 chr7B.!!$R2 2479
1 TraesCS7B01G337400 chr7B 591723707 591724418 711 False 1059.0 1059 93.6890 779 1483 1 chr7B.!!$F2 704
2 TraesCS7B01G337400 chr7B 591949318 591951193 1875 False 946.0 1733 94.4370 793 2331 2 chr7B.!!$F4 1538
3 TraesCS7B01G337400 chr7B 591713253 591713935 682 False 872.0 872 89.8990 800 1481 1 chr7B.!!$F1 681
4 TraesCS7B01G337400 chr7D 548708853 548709551 698 False 977.0 977 92.1540 794 1483 1 chr7D.!!$F4 689
5 TraesCS7B01G337400 chr7D 548696962 548697646 684 False 865.0 865 89.6400 800 1483 1 chr7D.!!$F3 683
6 TraesCS7B01G337400 chr7D 548775855 548782241 6386 True 690.5 1471 87.8900 1 1755 4 chr7D.!!$R2 1754
7 TraesCS7B01G337400 chr7A 632526436 632527449 1013 False 1099.0 1099 86.8650 800 1798 1 chr7A.!!$F1 998
8 TraesCS7B01G337400 chr7A 632531888 632532577 689 False 994.0 994 92.4720 781 1484 1 chr7A.!!$F2 703
9 TraesCS7B01G337400 chr7A 632550254 632553753 3499 True 762.5 1369 86.2035 1 1829 2 chr7A.!!$R4 1828

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
479 793 0.033366 AAAAAGTGATTGCGTGGGCC 59.967 50.0 0.0 0.0 38.85 5.8 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2434 9985 0.034476 GGCTGTTATACCCTACCGCC 59.966 60.0 0.0 0.0 37.46 6.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 0.546122 AATCACGCCTTGATGGGCTA 59.454 50.000 4.00 0.00 44.86 3.93
40 41 0.033642 TGTCGTGCCCGTCACAATAA 59.966 50.000 5.99 0.00 45.92 1.40
42 43 1.127951 GTCGTGCCCGTCACAATAAAG 59.872 52.381 5.99 0.00 45.92 1.85
43 44 1.001068 TCGTGCCCGTCACAATAAAGA 59.999 47.619 5.99 0.00 45.92 2.52
49 50 1.393539 CCGTCACAATAAAGACCTGCG 59.606 52.381 0.00 0.00 0.00 5.18
53 54 1.061131 CACAATAAAGACCTGCGCTCG 59.939 52.381 9.73 0.00 0.00 5.03
57 58 0.530744 TAAAGACCTGCGCTCGATGT 59.469 50.000 9.73 0.00 0.00 3.06
58 59 0.530744 AAAGACCTGCGCTCGATGTA 59.469 50.000 9.73 0.00 0.00 2.29
91 92 3.808036 CCGTGCGGTCTAAATGGG 58.192 61.111 1.93 0.00 0.00 4.00
92 93 2.469516 CCGTGCGGTCTAAATGGGC 61.470 63.158 1.93 0.00 0.00 5.36
98 99 2.518587 GTCTAAATGGGCGGGGGC 60.519 66.667 0.00 0.00 0.00 5.80
110 111 4.735358 GGGGGCGGTTTGAGGGTC 62.735 72.222 0.00 0.00 0.00 4.46
111 112 3.961414 GGGGCGGTTTGAGGGTCA 61.961 66.667 0.00 0.00 0.00 4.02
112 113 2.671963 GGGCGGTTTGAGGGTCAC 60.672 66.667 0.00 0.00 0.00 3.67
115 116 0.822121 GGCGGTTTGAGGGTCACTTT 60.822 55.000 0.00 0.00 0.00 2.66
117 118 0.951558 CGGTTTGAGGGTCACTTTGG 59.048 55.000 0.00 0.00 0.00 3.28
118 119 1.476110 CGGTTTGAGGGTCACTTTGGA 60.476 52.381 0.00 0.00 0.00 3.53
119 120 2.230660 GGTTTGAGGGTCACTTTGGAG 58.769 52.381 0.00 0.00 0.00 3.86
120 121 2.158667 GGTTTGAGGGTCACTTTGGAGA 60.159 50.000 0.00 0.00 0.00 3.71
121 122 3.498661 GGTTTGAGGGTCACTTTGGAGAT 60.499 47.826 0.00 0.00 0.00 2.75
123 124 2.619931 TGAGGGTCACTTTGGAGATGA 58.380 47.619 0.00 0.00 0.00 2.92
124 125 3.184628 TGAGGGTCACTTTGGAGATGAT 58.815 45.455 0.00 0.00 0.00 2.45
125 126 3.198635 TGAGGGTCACTTTGGAGATGATC 59.801 47.826 0.00 0.00 0.00 2.92
126 127 3.454082 GAGGGTCACTTTGGAGATGATCT 59.546 47.826 0.00 0.00 0.00 2.75
128 129 3.198635 GGGTCACTTTGGAGATGATCTGA 59.801 47.826 0.00 0.00 0.00 3.27
138 139 6.808008 TGGAGATGATCTGAGAAAAACAAC 57.192 37.500 0.00 0.00 0.00 3.32
143 144 4.447290 TGATCTGAGAAAAACAACCACGA 58.553 39.130 0.00 0.00 0.00 4.35
179 419 6.272318 CACCAACAAACACATACAACAATCT 58.728 36.000 0.00 0.00 0.00 2.40
181 421 5.691305 CCAACAAACACATACAACAATCTGG 59.309 40.000 0.00 0.00 0.00 3.86
183 423 6.072112 ACAAACACATACAACAATCTGGAC 57.928 37.500 0.00 0.00 0.00 4.02
189 429 2.568623 ACAACAATCTGGACTGGGAC 57.431 50.000 0.00 0.00 0.00 4.46
192 432 1.444933 ACAATCTGGACTGGGACCAA 58.555 50.000 0.00 0.00 36.95 3.67
194 434 1.352352 CAATCTGGACTGGGACCAAGT 59.648 52.381 0.00 0.00 36.95 3.16
195 435 0.987294 ATCTGGACTGGGACCAAGTG 59.013 55.000 6.15 0.00 36.95 3.16
201 441 1.302832 CTGGGACCAAGTGACTGGC 60.303 63.158 0.00 0.00 40.45 4.85
202 442 2.034221 GGGACCAAGTGACTGGCC 59.966 66.667 0.00 0.00 40.45 5.36
229 469 2.337583 GAGTCATGCTGTAACTTGCGA 58.662 47.619 0.00 0.00 0.00 5.10
241 481 1.076332 ACTTGCGACAACTAATCCGC 58.924 50.000 0.00 0.00 46.82 5.54
259 499 4.096003 CGGGCTCCAACGGGTCAT 62.096 66.667 0.00 0.00 34.93 3.06
276 516 3.144657 TCATGCACTGTTCATGAGGTT 57.855 42.857 17.19 0.00 43.63 3.50
277 517 3.489355 TCATGCACTGTTCATGAGGTTT 58.511 40.909 17.19 0.00 43.63 3.27
278 518 4.650734 TCATGCACTGTTCATGAGGTTTA 58.349 39.130 17.19 0.00 43.63 2.01
290 530 1.270839 TGAGGTTTAGTGGCTGCTCAC 60.271 52.381 11.69 11.69 37.89 3.51
317 557 0.098728 GTTGATCCGCCCGTTGATTG 59.901 55.000 0.00 0.00 0.00 2.67
318 558 0.322098 TTGATCCGCCCGTTGATTGT 60.322 50.000 0.00 0.00 0.00 2.71
319 559 0.322098 TGATCCGCCCGTTGATTGTT 60.322 50.000 0.00 0.00 0.00 2.83
320 560 0.808755 GATCCGCCCGTTGATTGTTT 59.191 50.000 0.00 0.00 0.00 2.83
335 649 5.065914 TGATTGTTTATAGCATCTCCAGCC 58.934 41.667 0.00 0.00 0.00 4.85
337 651 2.434336 TGTTTATAGCATCTCCAGCCGT 59.566 45.455 0.00 0.00 0.00 5.68
338 652 3.118408 TGTTTATAGCATCTCCAGCCGTT 60.118 43.478 0.00 0.00 0.00 4.44
339 653 2.820059 TATAGCATCTCCAGCCGTTG 57.180 50.000 0.00 0.00 0.00 4.10
359 673 3.076916 GGCCCCCAGGACAATTGC 61.077 66.667 5.05 0.00 43.07 3.56
360 674 3.451894 GCCCCCAGGACAATTGCG 61.452 66.667 5.05 0.00 33.47 4.85
362 676 2.755469 CCCCAGGACAATTGCGGG 60.755 66.667 5.05 10.30 36.59 6.13
363 677 2.755469 CCCAGGACAATTGCGGGG 60.755 66.667 5.05 6.13 42.09 5.73
364 678 3.451894 CCAGGACAATTGCGGGGC 61.452 66.667 5.05 0.00 0.00 5.80
366 680 1.077787 CAGGACAATTGCGGGGCTA 60.078 57.895 5.05 0.00 0.00 3.93
367 681 0.679640 CAGGACAATTGCGGGGCTAA 60.680 55.000 5.05 0.00 0.00 3.09
368 682 0.039035 AGGACAATTGCGGGGCTAAA 59.961 50.000 5.05 0.00 0.00 1.85
369 683 0.892063 GGACAATTGCGGGGCTAAAA 59.108 50.000 5.05 0.00 0.00 1.52
370 684 1.273886 GGACAATTGCGGGGCTAAAAA 59.726 47.619 5.05 0.00 0.00 1.94
371 685 2.093711 GGACAATTGCGGGGCTAAAAAT 60.094 45.455 5.05 0.00 0.00 1.82
372 686 3.131400 GGACAATTGCGGGGCTAAAAATA 59.869 43.478 5.05 0.00 0.00 1.40
375 689 1.840737 TTGCGGGGCTAAAAATAGCA 58.159 45.000 9.78 0.00 44.51 3.49
376 690 1.099689 TGCGGGGCTAAAAATAGCAC 58.900 50.000 9.78 5.90 45.38 4.40
378 692 1.375551 CGGGGCTAAAAATAGCACGT 58.624 50.000 9.78 0.00 47.00 4.49
379 693 1.329599 CGGGGCTAAAAATAGCACGTC 59.670 52.381 9.78 0.00 47.00 4.34
380 694 1.674441 GGGGCTAAAAATAGCACGTCC 59.326 52.381 9.78 2.10 47.00 4.79
381 695 2.640184 GGGCTAAAAATAGCACGTCCT 58.360 47.619 9.78 0.00 44.51 3.85
382 696 2.354821 GGGCTAAAAATAGCACGTCCTG 59.645 50.000 9.78 0.00 44.51 3.86
383 697 2.354821 GGCTAAAAATAGCACGTCCTGG 59.645 50.000 9.78 0.00 44.51 4.45
384 698 2.354821 GCTAAAAATAGCACGTCCTGGG 59.645 50.000 3.09 0.00 42.39 4.45
385 699 1.834188 AAAAATAGCACGTCCTGGGG 58.166 50.000 0.00 0.00 0.00 4.96
386 700 0.034477 AAAATAGCACGTCCTGGGGG 60.034 55.000 0.00 0.00 0.00 5.40
401 715 3.999821 GGGGGCAAAACATTTTCGT 57.000 47.368 0.00 0.00 0.00 3.85
402 716 1.790755 GGGGGCAAAACATTTTCGTC 58.209 50.000 0.00 0.00 0.00 4.20
403 717 1.414378 GGGGCAAAACATTTTCGTCG 58.586 50.000 0.00 0.00 0.00 5.12
404 718 1.414378 GGGCAAAACATTTTCGTCGG 58.586 50.000 0.00 0.00 0.00 4.79
405 719 1.001158 GGGCAAAACATTTTCGTCGGA 60.001 47.619 0.00 0.00 0.00 4.55
406 720 2.352323 GGGCAAAACATTTTCGTCGGAT 60.352 45.455 0.00 0.00 0.00 4.18
407 721 2.661195 GGCAAAACATTTTCGTCGGATG 59.339 45.455 0.00 0.00 0.00 3.51
409 723 3.978217 GCAAAACATTTTCGTCGGATGAA 59.022 39.130 8.54 8.54 0.00 2.57
411 725 5.609483 GCAAAACATTTTCGTCGGATGAAAC 60.609 40.000 21.64 7.23 33.26 2.78
412 726 3.449322 ACATTTTCGTCGGATGAAACG 57.551 42.857 21.64 17.88 33.26 3.60
413 727 2.166007 CATTTTCGTCGGATGAAACGC 58.834 47.619 21.64 0.00 38.72 4.84
414 728 0.162082 TTTTCGTCGGATGAAACGCG 59.838 50.000 21.64 3.53 38.72 6.01
430 744 2.480845 ACGCGAGTATATTTTCCCAGC 58.519 47.619 15.93 0.00 46.88 4.85
431 745 1.798813 CGCGAGTATATTTTCCCAGCC 59.201 52.381 0.00 0.00 0.00 4.85
433 747 2.805657 GCGAGTATATTTTCCCAGCCGT 60.806 50.000 0.00 0.00 0.00 5.68
434 748 3.463944 CGAGTATATTTTCCCAGCCGTT 58.536 45.455 0.00 0.00 0.00 4.44
435 749 4.624015 CGAGTATATTTTCCCAGCCGTTA 58.376 43.478 0.00 0.00 0.00 3.18
436 750 4.684703 CGAGTATATTTTCCCAGCCGTTAG 59.315 45.833 0.00 0.00 0.00 2.34
437 751 5.608449 GAGTATATTTTCCCAGCCGTTAGT 58.392 41.667 0.00 0.00 0.00 2.24
438 752 5.365619 AGTATATTTTCCCAGCCGTTAGTG 58.634 41.667 0.00 0.00 0.00 2.74
440 754 1.886886 TTTTCCCAGCCGTTAGTGTC 58.113 50.000 0.00 0.00 0.00 3.67
441 755 0.035739 TTTCCCAGCCGTTAGTGTCC 59.964 55.000 0.00 0.00 0.00 4.02
442 756 1.833787 TTCCCAGCCGTTAGTGTCCC 61.834 60.000 0.00 0.00 0.00 4.46
444 758 2.589157 CCAGCCGTTAGTGTCCCCA 61.589 63.158 0.00 0.00 0.00 4.96
445 759 1.079127 CAGCCGTTAGTGTCCCCAG 60.079 63.158 0.00 0.00 0.00 4.45
446 760 2.267961 GCCGTTAGTGTCCCCAGG 59.732 66.667 0.00 0.00 0.00 4.45
458 772 1.216064 TCCCCAGGACAATCATGAGG 58.784 55.000 0.09 0.00 27.97 3.86
460 774 0.256752 CCCAGGACAATCATGAGGCA 59.743 55.000 0.09 0.00 27.97 4.75
461 775 1.341285 CCCAGGACAATCATGAGGCAA 60.341 52.381 0.09 0.00 27.97 4.52
464 778 3.258872 CCAGGACAATCATGAGGCAAAAA 59.741 43.478 0.09 0.00 27.97 1.94
465 779 4.491676 CAGGACAATCATGAGGCAAAAAG 58.508 43.478 0.09 0.00 27.97 2.27
466 780 4.021719 CAGGACAATCATGAGGCAAAAAGT 60.022 41.667 0.09 0.00 27.97 2.66
468 782 4.022068 GGACAATCATGAGGCAAAAAGTGA 60.022 41.667 0.09 0.00 0.00 3.41
469 783 5.337009 GGACAATCATGAGGCAAAAAGTGAT 60.337 40.000 0.09 0.00 0.00 3.06
470 784 6.105397 ACAATCATGAGGCAAAAAGTGATT 57.895 33.333 0.09 0.00 36.91 2.57
471 785 6.403333 CAATCATGAGGCAAAAAGTGATTG 57.597 37.500 0.09 10.35 43.36 2.67
478 792 1.139163 CAAAAAGTGATTGCGTGGGC 58.861 50.000 0.00 0.00 40.52 5.36
479 793 0.033366 AAAAAGTGATTGCGTGGGCC 59.967 50.000 0.00 0.00 38.85 5.80
480 794 1.112315 AAAAGTGATTGCGTGGGCCA 61.112 50.000 0.00 0.00 38.85 5.36
481 795 1.112315 AAAGTGATTGCGTGGGCCAA 61.112 50.000 8.40 0.00 38.85 4.52
483 797 1.971167 GTGATTGCGTGGGCCAAGA 60.971 57.895 24.08 3.19 38.85 3.02
484 798 1.228398 TGATTGCGTGGGCCAAGAA 60.228 52.632 24.08 10.44 38.85 2.52
485 799 0.825425 TGATTGCGTGGGCCAAGAAA 60.825 50.000 24.08 19.83 38.85 2.52
487 801 0.755686 ATTGCGTGGGCCAAGAAAAA 59.244 45.000 24.08 13.49 38.85 1.94
488 802 0.103937 TTGCGTGGGCCAAGAAAAAG 59.896 50.000 24.08 3.16 38.85 2.27
490 804 1.460273 GCGTGGGCCAAGAAAAAGGA 61.460 55.000 24.08 0.00 0.00 3.36
494 808 1.081442 GGCCAAGAAAAAGGACGCG 60.081 57.895 3.53 3.53 0.00 6.01
495 809 1.652563 GCCAAGAAAAAGGACGCGT 59.347 52.632 13.85 13.85 0.00 6.01
496 810 0.869730 GCCAAGAAAAAGGACGCGTA 59.130 50.000 13.97 0.00 0.00 4.42
498 812 1.463444 CCAAGAAAAAGGACGCGTAGG 59.537 52.381 13.97 0.00 0.00 3.18
512 826 2.711542 GCGTAGGGGAATATGATTGGG 58.288 52.381 0.00 0.00 0.00 4.12
513 827 2.039879 GCGTAGGGGAATATGATTGGGT 59.960 50.000 0.00 0.00 0.00 4.51
514 828 3.262405 GCGTAGGGGAATATGATTGGGTA 59.738 47.826 0.00 0.00 0.00 3.69
515 829 4.080526 GCGTAGGGGAATATGATTGGGTAT 60.081 45.833 0.00 0.00 0.00 2.73
516 830 5.572885 GCGTAGGGGAATATGATTGGGTATT 60.573 44.000 0.00 0.00 0.00 1.89
517 831 5.880332 CGTAGGGGAATATGATTGGGTATTG 59.120 44.000 0.00 0.00 0.00 1.90
518 832 4.677182 AGGGGAATATGATTGGGTATTGC 58.323 43.478 0.00 0.00 0.00 3.56
519 833 4.358006 AGGGGAATATGATTGGGTATTGCT 59.642 41.667 0.00 0.00 31.68 3.91
520 834 5.086621 GGGGAATATGATTGGGTATTGCTT 58.913 41.667 0.00 0.00 31.68 3.91
521 835 5.543790 GGGGAATATGATTGGGTATTGCTTT 59.456 40.000 0.00 0.00 31.68 3.51
522 836 6.043127 GGGGAATATGATTGGGTATTGCTTTT 59.957 38.462 0.00 0.00 31.68 2.27
524 838 7.418942 GGGAATATGATTGGGTATTGCTTTTGT 60.419 37.037 0.00 0.00 31.68 2.83
525 839 7.986889 GGAATATGATTGGGTATTGCTTTTGTT 59.013 33.333 0.00 0.00 0.00 2.83
529 843 1.000283 TGGGTATTGCTTTTGTTGGCG 60.000 47.619 0.00 0.00 0.00 5.69
533 1002 2.730066 ATTGCTTTTGTTGGCGCCCC 62.730 55.000 26.77 15.59 0.00 5.80
535 1004 3.230245 CTTTTGTTGGCGCCCCCA 61.230 61.111 26.77 17.96 43.51 4.96
548 1017 1.906333 CCCCCAACAACCCCGAAAG 60.906 63.158 0.00 0.00 0.00 2.62
559 1028 3.124921 CCGAAAGCACGCCGGATT 61.125 61.111 5.05 0.00 45.58 3.01
561 1030 1.226018 CGAAAGCACGCCGGATTTC 60.226 57.895 5.05 6.07 0.00 2.17
562 1031 1.226018 GAAAGCACGCCGGATTTCG 60.226 57.895 5.05 0.27 38.88 3.46
569 1038 4.796495 GCCGGATTTCGCCTGGGT 62.796 66.667 5.05 0.00 37.59 4.51
570 1039 2.045340 CCGGATTTCGCCTGGGTT 60.045 61.111 0.00 0.00 37.59 4.11
571 1040 1.677633 CCGGATTTCGCCTGGGTTT 60.678 57.895 0.00 0.00 37.59 3.27
572 1041 1.506262 CGGATTTCGCCTGGGTTTG 59.494 57.895 0.00 0.00 0.00 2.93
573 1042 1.215382 GGATTTCGCCTGGGTTTGC 59.785 57.895 0.00 0.00 0.00 3.68
576 1045 0.539438 ATTTCGCCTGGGTTTGCAGA 60.539 50.000 0.00 0.00 0.00 4.26
578 1047 3.726517 CGCCTGGGTTTGCAGACG 61.727 66.667 0.70 0.00 0.00 4.18
579 1048 4.043200 GCCTGGGTTTGCAGACGC 62.043 66.667 16.45 16.45 39.24 5.19
581 1050 2.281761 CTGGGTTTGCAGACGCCT 60.282 61.111 19.76 0.00 37.32 5.52
582 1051 1.898574 CTGGGTTTGCAGACGCCTT 60.899 57.895 19.76 0.00 37.32 4.35
583 1052 1.454847 TGGGTTTGCAGACGCCTTT 60.455 52.632 19.76 0.00 37.32 3.11
584 1053 1.040339 TGGGTTTGCAGACGCCTTTT 61.040 50.000 19.76 0.00 37.32 2.27
585 1054 0.104120 GGGTTTGCAGACGCCTTTTT 59.896 50.000 12.85 0.00 37.32 1.94
587 1056 1.202359 GGTTTGCAGACGCCTTTTTGA 60.202 47.619 0.70 0.00 37.32 2.69
588 1057 2.119457 GTTTGCAGACGCCTTTTTGAG 58.881 47.619 0.00 0.00 37.32 3.02
598 1067 2.675658 CCTTTTTGAGGTCTTGGGGA 57.324 50.000 0.00 0.00 40.95 4.81
599 1068 2.239400 CCTTTTTGAGGTCTTGGGGAC 58.761 52.381 0.00 0.00 40.95 4.46
600 1069 1.880027 CTTTTTGAGGTCTTGGGGACG 59.120 52.381 0.00 0.00 45.35 4.79
601 1070 0.536460 TTTTGAGGTCTTGGGGACGC 60.536 55.000 0.00 0.00 45.35 5.19
602 1071 1.415672 TTTGAGGTCTTGGGGACGCT 61.416 55.000 0.00 0.00 45.35 5.07
615 2300 3.628646 GACGCTTGGGGGCATGACT 62.629 63.158 0.00 0.00 0.00 3.41
646 2369 4.379339 TTGCCCTTTTTACATTATCGGC 57.621 40.909 0.00 0.00 35.67 5.54
647 2370 3.357203 TGCCCTTTTTACATTATCGGCA 58.643 40.909 0.00 0.00 42.62 5.69
648 2371 3.129638 TGCCCTTTTTACATTATCGGCAC 59.870 43.478 0.00 0.00 40.11 5.01
649 2372 3.129638 GCCCTTTTTACATTATCGGCACA 59.870 43.478 0.00 0.00 35.20 4.57
650 2373 4.668289 CCCTTTTTACATTATCGGCACAC 58.332 43.478 0.00 0.00 0.00 3.82
651 2374 4.156922 CCCTTTTTACATTATCGGCACACA 59.843 41.667 0.00 0.00 0.00 3.72
652 2375 5.336055 CCCTTTTTACATTATCGGCACACAA 60.336 40.000 0.00 0.00 0.00 3.33
653 2376 6.153067 CCTTTTTACATTATCGGCACACAAA 58.847 36.000 0.00 0.00 0.00 2.83
654 2377 6.642950 CCTTTTTACATTATCGGCACACAAAA 59.357 34.615 0.00 0.00 0.00 2.44
655 2378 7.169982 CCTTTTTACATTATCGGCACACAAAAA 59.830 33.333 0.00 0.00 0.00 1.94
656 2379 7.630470 TTTTACATTATCGGCACACAAAAAG 57.370 32.000 0.00 0.00 0.00 2.27
657 2380 4.846779 ACATTATCGGCACACAAAAAGT 57.153 36.364 0.00 0.00 0.00 2.66
658 2381 5.950758 ACATTATCGGCACACAAAAAGTA 57.049 34.783 0.00 0.00 0.00 2.24
659 2382 5.938322 ACATTATCGGCACACAAAAAGTAG 58.062 37.500 0.00 0.00 0.00 2.57
660 2383 2.989422 ATCGGCACACAAAAAGTAGC 57.011 45.000 0.00 0.00 0.00 3.58
661 2384 0.948678 TCGGCACACAAAAAGTAGCC 59.051 50.000 0.00 0.00 43.46 3.93
662 2385 0.951558 CGGCACACAAAAAGTAGCCT 59.048 50.000 0.00 0.00 44.24 4.58
663 2386 1.336755 CGGCACACAAAAAGTAGCCTT 59.663 47.619 0.00 0.00 44.24 4.35
664 2387 2.742774 GGCACACAAAAAGTAGCCTTG 58.257 47.619 0.00 0.00 43.51 3.61
665 2388 2.545742 GGCACACAAAAAGTAGCCTTGG 60.546 50.000 0.00 0.00 43.51 3.61
666 2389 2.545742 GCACACAAAAAGTAGCCTTGGG 60.546 50.000 0.00 0.00 0.00 4.12
667 2390 2.035832 CACACAAAAAGTAGCCTTGGGG 59.964 50.000 0.00 0.00 0.00 4.96
668 2391 1.618343 CACAAAAAGTAGCCTTGGGGG 59.382 52.381 0.00 0.00 38.36 5.40
669 2392 1.219469 ACAAAAAGTAGCCTTGGGGGT 59.781 47.619 0.00 0.00 46.15 4.95
670 2393 2.325484 CAAAAAGTAGCCTTGGGGGTT 58.675 47.619 0.00 0.00 43.77 4.11
671 2394 2.299013 CAAAAAGTAGCCTTGGGGGTTC 59.701 50.000 0.00 0.00 43.77 3.62
672 2395 1.456919 AAAGTAGCCTTGGGGGTTCT 58.543 50.000 0.00 0.00 43.77 3.01
673 2396 1.456919 AAGTAGCCTTGGGGGTTCTT 58.543 50.000 0.00 0.00 42.87 2.52
674 2397 0.698818 AGTAGCCTTGGGGGTTCTTG 59.301 55.000 0.00 0.00 43.77 3.02
675 2398 0.323451 GTAGCCTTGGGGGTTCTTGG 60.323 60.000 0.00 0.00 43.77 3.61
676 2399 1.506028 TAGCCTTGGGGGTTCTTGGG 61.506 60.000 0.00 0.00 43.77 4.12
677 2400 2.445155 CCTTGGGGGTTCTTGGGG 59.555 66.667 0.00 0.00 0.00 4.96
678 2401 2.445155 CTTGGGGGTTCTTGGGGG 59.555 66.667 0.00 0.00 0.00 5.40
679 2402 3.905153 CTTGGGGGTTCTTGGGGGC 62.905 68.421 0.00 0.00 0.00 5.80
695 2418 3.934684 GCGCGGCTGAAGATGCTC 61.935 66.667 8.83 0.00 0.00 4.26
696 2419 2.202851 CGCGGCTGAAGATGCTCT 60.203 61.111 0.00 0.00 0.00 4.09
697 2420 1.812922 CGCGGCTGAAGATGCTCTT 60.813 57.895 0.00 0.00 39.87 2.85
698 2421 1.720301 GCGGCTGAAGATGCTCTTG 59.280 57.895 0.00 0.00 36.73 3.02
699 2422 0.742281 GCGGCTGAAGATGCTCTTGA 60.742 55.000 0.00 0.00 36.73 3.02
700 2423 1.730501 CGGCTGAAGATGCTCTTGAA 58.269 50.000 3.55 0.00 36.73 2.69
701 2424 1.664659 CGGCTGAAGATGCTCTTGAAG 59.335 52.381 3.55 0.00 36.73 3.02
702 2425 2.015587 GGCTGAAGATGCTCTTGAAGG 58.984 52.381 3.55 0.00 36.73 3.46
703 2426 2.015587 GCTGAAGATGCTCTTGAAGGG 58.984 52.381 3.55 0.00 36.73 3.95
704 2427 2.355513 GCTGAAGATGCTCTTGAAGGGA 60.356 50.000 0.00 0.00 36.73 4.20
705 2428 3.684981 GCTGAAGATGCTCTTGAAGGGAT 60.685 47.826 0.00 0.00 36.73 3.85
706 2429 3.878103 CTGAAGATGCTCTTGAAGGGATG 59.122 47.826 0.00 0.00 36.73 3.51
707 2430 3.265221 TGAAGATGCTCTTGAAGGGATGT 59.735 43.478 0.00 0.00 36.73 3.06
708 2431 3.557228 AGATGCTCTTGAAGGGATGTC 57.443 47.619 0.00 0.00 0.00 3.06
709 2432 2.842496 AGATGCTCTTGAAGGGATGTCA 59.158 45.455 0.00 0.00 0.00 3.58
710 2433 2.479566 TGCTCTTGAAGGGATGTCAC 57.520 50.000 0.00 0.00 0.00 3.67
711 2434 1.003580 TGCTCTTGAAGGGATGTCACC 59.996 52.381 0.00 0.00 0.00 4.02
712 2435 2.009042 GCTCTTGAAGGGATGTCACCG 61.009 57.143 0.00 0.00 0.00 4.94
713 2436 1.276421 CTCTTGAAGGGATGTCACCGT 59.724 52.381 0.00 0.00 0.00 4.83
714 2437 2.496070 CTCTTGAAGGGATGTCACCGTA 59.504 50.000 0.00 0.00 0.00 4.02
715 2438 2.232941 TCTTGAAGGGATGTCACCGTAC 59.767 50.000 0.00 0.00 0.00 3.67
716 2439 1.634960 TGAAGGGATGTCACCGTACA 58.365 50.000 0.00 0.00 0.00 2.90
717 2440 2.184533 TGAAGGGATGTCACCGTACAT 58.815 47.619 0.00 0.00 42.75 2.29
718 2441 2.569853 TGAAGGGATGTCACCGTACATT 59.430 45.455 0.00 0.00 40.17 2.71
719 2442 3.008594 TGAAGGGATGTCACCGTACATTT 59.991 43.478 0.00 0.00 40.17 2.32
720 2443 3.261981 AGGGATGTCACCGTACATTTC 57.738 47.619 0.00 0.00 40.17 2.17
721 2444 2.569853 AGGGATGTCACCGTACATTTCA 59.430 45.455 0.00 0.00 40.17 2.69
722 2445 2.676342 GGGATGTCACCGTACATTTCAC 59.324 50.000 0.00 0.00 40.17 3.18
723 2446 2.676342 GGATGTCACCGTACATTTCACC 59.324 50.000 0.00 0.00 40.17 4.02
724 2447 1.785768 TGTCACCGTACATTTCACCG 58.214 50.000 0.00 0.00 0.00 4.94
725 2448 1.073177 GTCACCGTACATTTCACCGG 58.927 55.000 0.00 0.00 45.72 5.28
726 2449 0.671163 TCACCGTACATTTCACCGGC 60.671 55.000 0.00 0.00 44.14 6.13
727 2450 0.951525 CACCGTACATTTCACCGGCA 60.952 55.000 0.00 0.00 44.14 5.69
728 2451 0.250381 ACCGTACATTTCACCGGCAA 60.250 50.000 0.00 0.00 44.14 4.52
729 2452 1.091537 CCGTACATTTCACCGGCAAT 58.908 50.000 0.00 0.00 33.20 3.56
730 2453 1.202132 CCGTACATTTCACCGGCAATG 60.202 52.381 16.39 16.39 36.59 2.82
731 2454 1.466950 CGTACATTTCACCGGCAATGT 59.533 47.619 23.44 23.44 44.18 2.71
732 2455 2.475519 CGTACATTTCACCGGCAATGTC 60.476 50.000 23.56 16.31 41.67 3.06
733 2456 1.614996 ACATTTCACCGGCAATGTCA 58.385 45.000 17.45 0.00 38.97 3.58
734 2457 1.269448 ACATTTCACCGGCAATGTCAC 59.731 47.619 17.45 0.00 38.97 3.67
735 2458 0.887933 ATTTCACCGGCAATGTCACC 59.112 50.000 0.00 0.00 0.00 4.02
736 2459 1.175983 TTTCACCGGCAATGTCACCC 61.176 55.000 0.00 0.00 0.00 4.61
737 2460 3.430862 CACCGGCAATGTCACCCG 61.431 66.667 0.00 2.33 41.60 5.28
738 2461 3.632080 ACCGGCAATGTCACCCGA 61.632 61.111 0.00 0.00 44.55 5.14
739 2462 2.124736 CCGGCAATGTCACCCGAT 60.125 61.111 9.33 0.00 44.55 4.18
742 2465 1.154205 CGGCAATGTCACCCGATCTC 61.154 60.000 3.05 0.00 44.55 2.75
749 2472 0.970937 GTCACCCGATCTCAGTCCCA 60.971 60.000 0.00 0.00 0.00 4.37
752 2475 0.544357 ACCCGATCTCAGTCCCAACA 60.544 55.000 0.00 0.00 0.00 3.33
776 2499 6.824305 ATCCATATCTTTATCCCGCAAAAG 57.176 37.500 0.00 0.00 34.65 2.27
779 2502 7.004086 TCCATATCTTTATCCCGCAAAAGAAT 58.996 34.615 2.01 0.00 43.05 2.40
847 2570 2.191786 ATCCAACCGTCGAATGCCCA 62.192 55.000 0.00 0.00 0.00 5.36
928 2667 2.106131 ACAGCAGTGACGAACGCA 59.894 55.556 0.00 0.00 32.81 5.24
935 2674 3.598715 TGACGAACGCACCTCCGT 61.599 61.111 0.00 0.00 44.41 4.69
937 2677 4.657824 ACGAACGCACCTCCGTGG 62.658 66.667 0.00 0.00 41.90 4.94
944 2684 2.590092 CACCTCCGTGGAATCCCC 59.410 66.667 0.00 0.00 39.71 4.81
964 2706 2.491825 CCAACCACCAACCAAATCCCTA 60.492 50.000 0.00 0.00 0.00 3.53
980 2727 1.526455 CTACTCTCCCTCGTCCCGG 60.526 68.421 0.00 0.00 0.00 5.73
1446 8618 3.621805 TCGCCCAAGAAGACCGCA 61.622 61.111 0.00 0.00 0.00 5.69
1526 8723 4.339530 TGGTGTAGATGTAGATCTGTGCTC 59.660 45.833 12.50 4.20 39.44 4.26
1537 8736 4.077822 AGATCTGTGCTCCCAAGAAAAAG 58.922 43.478 0.00 0.00 0.00 2.27
1622 8824 2.159240 TGTGTCGATGTAGATCTGTGCC 60.159 50.000 5.18 0.00 0.00 5.01
1687 8901 7.639113 ATTGTTTGTTCTTCTGTTCTTGGTA 57.361 32.000 0.00 0.00 0.00 3.25
1705 8919 6.828273 TCTTGGTATTGCAATGTTAGCATAGT 59.172 34.615 22.27 0.00 42.33 2.12
1707 8921 8.512966 TTGGTATTGCAATGTTAGCATAGTTA 57.487 30.769 22.27 0.17 42.33 2.24
1728 8943 4.884668 ACGGTGGAAAAACTCAGATCTA 57.115 40.909 0.00 0.00 0.00 1.98
1762 8992 6.183360 TGTCAACATTTCTTTCTTGTGGTACC 60.183 38.462 4.43 4.43 0.00 3.34
1803 9033 2.092968 AGTTTCAGCGATGCCCAAGATA 60.093 45.455 0.00 0.00 0.00 1.98
1830 9061 4.455533 TGAACCAAAATCAGTTGAGATCCG 59.544 41.667 0.00 0.00 0.00 4.18
1831 9062 2.749621 ACCAAAATCAGTTGAGATCCGC 59.250 45.455 0.00 0.00 0.00 5.54
1833 9064 1.009829 AAATCAGTTGAGATCCGCGC 58.990 50.000 0.00 0.00 0.00 6.86
1836 9067 2.103143 AGTTGAGATCCGCGCGAG 59.897 61.111 34.63 21.63 0.00 5.03
1857 9088 3.751698 AGTTCCCACGCAGAGTAATTTTC 59.248 43.478 0.00 0.00 0.00 2.29
1866 9097 3.265791 CAGAGTAATTTTCGCAGGAGCT 58.734 45.455 0.00 0.00 39.10 4.09
1877 9108 3.694364 CAGGAGCTGCGTATGGAAT 57.306 52.632 0.00 0.00 0.00 3.01
1878 9109 1.959042 CAGGAGCTGCGTATGGAATT 58.041 50.000 0.00 0.00 0.00 2.17
1879 9110 1.600957 CAGGAGCTGCGTATGGAATTG 59.399 52.381 0.00 0.00 0.00 2.32
1904 9141 2.171448 GGAGCCAACCATGAGTCTGTAT 59.829 50.000 0.00 0.00 0.00 2.29
1935 9172 1.142060 TGACAACCCCAGTGAAATCGT 59.858 47.619 0.00 0.00 0.00 3.73
1950 9187 6.706270 AGTGAAATCGTATGGGCAAATACTAG 59.294 38.462 7.66 0.00 31.92 2.57
1954 9191 3.895656 TCGTATGGGCAAATACTAGAGCT 59.104 43.478 0.00 0.00 31.92 4.09
1981 9218 1.804748 CAAGCGAAAAGTAGACACCCC 59.195 52.381 0.00 0.00 0.00 4.95
2010 9273 1.988107 TCTCCCATGCTTTCTTCCAGT 59.012 47.619 0.00 0.00 0.00 4.00
2039 9302 3.365666 GGCATCTTCAATCGCCATACATG 60.366 47.826 0.00 0.00 44.25 3.21
2050 9313 2.807967 CGCCATACATGAAATCGGACAT 59.192 45.455 0.00 0.00 0.00 3.06
2087 9350 3.986006 GTCTGGACACCGCCACGA 61.986 66.667 0.00 0.00 33.52 4.35
2099 9362 2.644992 CCACGAAAGCCAACTGCC 59.355 61.111 0.00 0.00 42.71 4.85
2135 9398 2.227865 CCGGATTTGAACAAACACGGAT 59.772 45.455 25.65 4.30 46.65 4.18
2136 9399 3.233578 CGGATTTGAACAAACACGGATG 58.766 45.455 13.58 0.00 32.63 3.51
2151 9414 2.497107 GGATGGAATTCATGCAACCG 57.503 50.000 7.93 0.00 42.79 4.44
2155 9418 0.455815 GGAATTCATGCAACCGGGAC 59.544 55.000 6.32 0.00 0.00 4.46
2239 9551 5.305386 TGTGTTGAGCTAGCTATGGATGTAT 59.695 40.000 19.38 0.00 0.00 2.29
2240 9552 5.866633 GTGTTGAGCTAGCTATGGATGTATC 59.133 44.000 19.38 1.45 0.00 2.24
2241 9553 5.539955 TGTTGAGCTAGCTATGGATGTATCA 59.460 40.000 19.38 4.44 0.00 2.15
2244 9556 4.420206 AGCTAGCTATGGATGTATCACCA 58.580 43.478 17.69 0.00 40.57 4.17
2331 9882 4.017126 TGTGACCATAGTACTCCAGTGAG 58.983 47.826 0.00 0.00 44.62 3.51
2332 9883 3.381908 GTGACCATAGTACTCCAGTGAGG 59.618 52.174 0.00 0.00 43.29 3.86
2333 9884 2.362717 GACCATAGTACTCCAGTGAGGC 59.637 54.545 0.00 0.00 43.29 4.70
2334 9885 2.023888 ACCATAGTACTCCAGTGAGGCT 60.024 50.000 0.00 0.00 43.29 4.58
2335 9886 3.204606 ACCATAGTACTCCAGTGAGGCTA 59.795 47.826 0.00 0.00 43.29 3.93
2336 9887 4.215908 CCATAGTACTCCAGTGAGGCTAA 58.784 47.826 0.00 0.00 43.29 3.09
2337 9888 4.649674 CCATAGTACTCCAGTGAGGCTAAA 59.350 45.833 0.00 0.00 43.29 1.85
2338 9889 5.305644 CCATAGTACTCCAGTGAGGCTAAAT 59.694 44.000 0.00 0.00 43.29 1.40
2339 9890 6.183361 CCATAGTACTCCAGTGAGGCTAAATT 60.183 42.308 0.00 0.00 43.29 1.82
2340 9891 5.763876 AGTACTCCAGTGAGGCTAAATTT 57.236 39.130 0.00 0.00 43.29 1.82
2341 9892 5.735766 AGTACTCCAGTGAGGCTAAATTTC 58.264 41.667 0.00 0.00 43.29 2.17
2342 9893 3.600388 ACTCCAGTGAGGCTAAATTTCG 58.400 45.455 0.00 0.00 43.29 3.46
2343 9894 3.008049 ACTCCAGTGAGGCTAAATTTCGT 59.992 43.478 0.00 0.00 43.29 3.85
2344 9895 3.334691 TCCAGTGAGGCTAAATTTCGTG 58.665 45.455 0.00 0.00 37.29 4.35
2345 9896 3.074412 CCAGTGAGGCTAAATTTCGTGT 58.926 45.455 0.00 0.00 0.00 4.49
2346 9897 3.502211 CCAGTGAGGCTAAATTTCGTGTT 59.498 43.478 0.00 0.00 0.00 3.32
2347 9898 4.023193 CCAGTGAGGCTAAATTTCGTGTTT 60.023 41.667 0.00 0.00 0.00 2.83
2348 9899 5.507315 CCAGTGAGGCTAAATTTCGTGTTTT 60.507 40.000 0.00 0.00 0.00 2.43
2349 9900 5.399301 CAGTGAGGCTAAATTTCGTGTTTTG 59.601 40.000 0.00 0.00 0.00 2.44
2350 9901 5.298276 AGTGAGGCTAAATTTCGTGTTTTGA 59.702 36.000 0.00 0.00 0.00 2.69
2351 9902 5.398416 GTGAGGCTAAATTTCGTGTTTTGAC 59.602 40.000 0.00 0.00 0.00 3.18
2352 9903 4.866921 AGGCTAAATTTCGTGTTTTGACC 58.133 39.130 0.00 0.00 0.00 4.02
2353 9904 3.985279 GGCTAAATTTCGTGTTTTGACCC 59.015 43.478 0.00 0.00 0.00 4.46
2354 9905 4.261867 GGCTAAATTTCGTGTTTTGACCCT 60.262 41.667 0.00 0.00 0.00 4.34
2355 9906 5.286438 GCTAAATTTCGTGTTTTGACCCTT 58.714 37.500 0.00 0.00 0.00 3.95
2356 9907 5.751509 GCTAAATTTCGTGTTTTGACCCTTT 59.248 36.000 0.00 0.00 0.00 3.11
2357 9908 6.256975 GCTAAATTTCGTGTTTTGACCCTTTT 59.743 34.615 0.00 0.00 0.00 2.27
2358 9909 6.656314 AAATTTCGTGTTTTGACCCTTTTC 57.344 33.333 0.00 0.00 0.00 2.29
2359 9910 5.592104 ATTTCGTGTTTTGACCCTTTTCT 57.408 34.783 0.00 0.00 0.00 2.52
2360 9911 4.364415 TTCGTGTTTTGACCCTTTTCTG 57.636 40.909 0.00 0.00 0.00 3.02
2361 9912 3.611970 TCGTGTTTTGACCCTTTTCTGA 58.388 40.909 0.00 0.00 0.00 3.27
2362 9913 4.011023 TCGTGTTTTGACCCTTTTCTGAA 58.989 39.130 0.00 0.00 0.00 3.02
2363 9914 4.459685 TCGTGTTTTGACCCTTTTCTGAAA 59.540 37.500 0.00 0.00 0.00 2.69
2364 9915 4.561213 CGTGTTTTGACCCTTTTCTGAAAC 59.439 41.667 1.58 0.00 0.00 2.78
2365 9916 4.868171 GTGTTTTGACCCTTTTCTGAAACC 59.132 41.667 1.58 0.00 0.00 3.27
2366 9917 4.775253 TGTTTTGACCCTTTTCTGAAACCT 59.225 37.500 1.58 0.00 0.00 3.50
2367 9918 5.952947 TGTTTTGACCCTTTTCTGAAACCTA 59.047 36.000 1.58 0.00 0.00 3.08
2368 9919 6.609616 TGTTTTGACCCTTTTCTGAAACCTAT 59.390 34.615 1.58 0.00 0.00 2.57
2369 9920 7.125053 TGTTTTGACCCTTTTCTGAAACCTATT 59.875 33.333 1.58 0.00 0.00 1.73
2370 9921 6.894339 TTGACCCTTTTCTGAAACCTATTC 57.106 37.500 1.58 0.00 0.00 1.75
2371 9922 5.947663 TGACCCTTTTCTGAAACCTATTCA 58.052 37.500 1.58 0.25 0.00 2.57
2372 9923 6.369629 TGACCCTTTTCTGAAACCTATTCAA 58.630 36.000 1.58 0.00 0.00 2.69
2373 9924 6.490040 TGACCCTTTTCTGAAACCTATTCAAG 59.510 38.462 1.58 0.00 0.00 3.02
2374 9925 6.610830 ACCCTTTTCTGAAACCTATTCAAGA 58.389 36.000 1.58 0.00 0.00 3.02
2375 9926 7.241628 ACCCTTTTCTGAAACCTATTCAAGAT 58.758 34.615 1.58 0.00 0.00 2.40
2376 9927 7.394641 ACCCTTTTCTGAAACCTATTCAAGATC 59.605 37.037 1.58 0.00 0.00 2.75
2377 9928 7.613411 CCCTTTTCTGAAACCTATTCAAGATCT 59.387 37.037 1.58 0.00 0.00 2.75
2378 9929 8.457261 CCTTTTCTGAAACCTATTCAAGATCTG 58.543 37.037 1.58 0.00 0.00 2.90
2379 9930 9.224267 CTTTTCTGAAACCTATTCAAGATCTGA 57.776 33.333 1.58 0.00 0.00 3.27
2380 9931 8.553459 TTTCTGAAACCTATTCAAGATCTGAC 57.447 34.615 0.00 0.00 32.21 3.51
2381 9932 6.644347 TCTGAAACCTATTCAAGATCTGACC 58.356 40.000 0.00 0.00 32.21 4.02
2382 9933 5.745227 TGAAACCTATTCAAGATCTGACCC 58.255 41.667 0.00 0.00 32.21 4.46
2383 9934 5.488919 TGAAACCTATTCAAGATCTGACCCT 59.511 40.000 0.00 0.00 32.21 4.34
2384 9935 6.672218 TGAAACCTATTCAAGATCTGACCCTA 59.328 38.462 0.00 0.00 32.21 3.53
2385 9936 6.739331 AACCTATTCAAGATCTGACCCTAG 57.261 41.667 0.00 0.00 32.21 3.02
2386 9937 5.782925 ACCTATTCAAGATCTGACCCTAGT 58.217 41.667 0.00 0.00 32.21 2.57
2387 9938 6.206042 ACCTATTCAAGATCTGACCCTAGTT 58.794 40.000 0.00 0.00 32.21 2.24
2388 9939 6.674419 ACCTATTCAAGATCTGACCCTAGTTT 59.326 38.462 0.00 0.00 32.21 2.66
2389 9940 6.989169 CCTATTCAAGATCTGACCCTAGTTTG 59.011 42.308 0.00 0.00 32.21 2.93
2390 9941 6.627087 ATTCAAGATCTGACCCTAGTTTGA 57.373 37.500 0.00 0.00 32.21 2.69
2391 9942 6.627087 TTCAAGATCTGACCCTAGTTTGAT 57.373 37.500 0.00 0.00 32.21 2.57
2392 9943 6.627087 TCAAGATCTGACCCTAGTTTGATT 57.373 37.500 0.00 0.00 0.00 2.57
2393 9944 7.020827 TCAAGATCTGACCCTAGTTTGATTT 57.979 36.000 0.00 0.00 0.00 2.17
2394 9945 7.461749 TCAAGATCTGACCCTAGTTTGATTTT 58.538 34.615 0.00 0.00 0.00 1.82
2395 9946 7.944554 TCAAGATCTGACCCTAGTTTGATTTTT 59.055 33.333 0.00 0.00 0.00 1.94
2417 9968 4.853924 TTTTGAGATCTGACCCTTTTGC 57.146 40.909 0.00 0.00 0.00 3.68
2418 9969 3.795688 TTGAGATCTGACCCTTTTGCT 57.204 42.857 0.00 0.00 0.00 3.91
2419 9970 4.908601 TTGAGATCTGACCCTTTTGCTA 57.091 40.909 0.00 0.00 0.00 3.49
2420 9971 4.207891 TGAGATCTGACCCTTTTGCTAC 57.792 45.455 0.00 0.00 0.00 3.58
2421 9972 3.055094 TGAGATCTGACCCTTTTGCTACC 60.055 47.826 0.00 0.00 0.00 3.18
2422 9973 2.093447 AGATCTGACCCTTTTGCTACCG 60.093 50.000 0.00 0.00 0.00 4.02
2423 9974 0.323629 TCTGACCCTTTTGCTACCGG 59.676 55.000 0.00 0.00 0.00 5.28
2424 9975 1.302993 TGACCCTTTTGCTACCGGC 60.303 57.895 0.00 0.00 42.22 6.13
2440 9991 3.792736 GCAGGGTCCATGGCGGTA 61.793 66.667 6.96 0.00 35.57 4.02
2441 9992 2.505982 CAGGGTCCATGGCGGTAG 59.494 66.667 6.96 0.00 35.57 3.18
2442 9993 2.768344 AGGGTCCATGGCGGTAGG 60.768 66.667 6.96 0.00 35.57 3.18
2443 9994 3.873812 GGGTCCATGGCGGTAGGG 61.874 72.222 6.96 0.00 35.57 3.53
2444 9995 3.087906 GGTCCATGGCGGTAGGGT 61.088 66.667 6.96 0.00 35.57 4.34
2445 9996 1.763256 GGTCCATGGCGGTAGGGTA 60.763 63.158 6.96 0.00 35.57 3.69
2446 9997 1.125711 GGTCCATGGCGGTAGGGTAT 61.126 60.000 6.96 0.00 35.57 2.73
2447 9998 1.636148 GTCCATGGCGGTAGGGTATA 58.364 55.000 6.96 0.00 35.57 1.47
2448 9999 1.972795 GTCCATGGCGGTAGGGTATAA 59.027 52.381 6.96 0.00 35.57 0.98
2449 10000 1.972795 TCCATGGCGGTAGGGTATAAC 59.027 52.381 6.96 0.00 35.57 1.89
2450 10001 1.695242 CCATGGCGGTAGGGTATAACA 59.305 52.381 0.00 0.00 0.00 2.41
2451 10002 2.289444 CCATGGCGGTAGGGTATAACAG 60.289 54.545 0.00 0.00 0.00 3.16
2452 10003 0.754472 TGGCGGTAGGGTATAACAGC 59.246 55.000 0.00 0.00 36.28 4.40
2453 10004 0.034476 GGCGGTAGGGTATAACAGCC 59.966 60.000 1.03 1.03 46.91 4.85
2459 10010 3.601277 GGGTATAACAGCCTACCGC 57.399 57.895 0.00 0.00 41.95 5.68
2460 10011 0.034476 GGGTATAACAGCCTACCGCC 59.966 60.000 0.00 0.00 41.95 6.13
2461 10012 0.754472 GGTATAACAGCCTACCGCCA 59.246 55.000 0.00 0.00 38.78 5.69
2462 10013 1.139455 GGTATAACAGCCTACCGCCAA 59.861 52.381 0.00 0.00 38.78 4.52
2463 10014 2.480845 GTATAACAGCCTACCGCCAAG 58.519 52.381 0.00 0.00 38.78 3.61
2476 10027 3.006728 CCAAGGTCCCTGGCGGTA 61.007 66.667 0.00 0.00 0.00 4.02
2477 10028 2.584608 CAAGGTCCCTGGCGGTAG 59.415 66.667 0.00 0.00 0.00 3.18
2478 10029 2.687566 AAGGTCCCTGGCGGTAGG 60.688 66.667 0.00 0.00 37.59 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 1.586422 CACGACATAGCCCATCAAGG 58.414 55.000 0.00 0.00 37.03 3.61
11 12 1.146041 GGCACGACATAGCCCATCA 59.854 57.895 0.00 0.00 45.18 3.07
32 33 2.472695 AGCGCAGGTCTTTATTGTGA 57.527 45.000 11.47 0.00 0.00 3.58
43 44 1.803334 TTTTTACATCGAGCGCAGGT 58.197 45.000 11.47 0.00 46.54 4.00
64 65 2.560861 CCGCACGGTTTGGACATG 59.439 61.111 0.00 0.00 0.00 3.21
98 99 0.951558 CCAAAGTGACCCTCAAACCG 59.048 55.000 0.00 0.00 0.00 4.44
100 101 3.208747 TCTCCAAAGTGACCCTCAAAC 57.791 47.619 0.00 0.00 0.00 2.93
110 111 7.040892 TGTTTTTCTCAGATCATCTCCAAAGTG 60.041 37.037 0.00 0.00 0.00 3.16
111 112 7.000472 TGTTTTTCTCAGATCATCTCCAAAGT 59.000 34.615 0.00 0.00 0.00 2.66
112 113 7.444629 TGTTTTTCTCAGATCATCTCCAAAG 57.555 36.000 0.00 0.00 0.00 2.77
115 116 5.707298 GGTTGTTTTTCTCAGATCATCTCCA 59.293 40.000 0.00 0.00 0.00 3.86
117 118 6.606768 GTGGTTGTTTTTCTCAGATCATCTC 58.393 40.000 0.00 0.00 0.00 2.75
118 119 5.180117 CGTGGTTGTTTTTCTCAGATCATCT 59.820 40.000 0.00 0.00 0.00 2.90
119 120 5.179368 TCGTGGTTGTTTTTCTCAGATCATC 59.821 40.000 0.00 0.00 0.00 2.92
120 121 5.063204 TCGTGGTTGTTTTTCTCAGATCAT 58.937 37.500 0.00 0.00 0.00 2.45
121 122 4.447290 TCGTGGTTGTTTTTCTCAGATCA 58.553 39.130 0.00 0.00 0.00 2.92
123 124 6.878923 TCATATCGTGGTTGTTTTTCTCAGAT 59.121 34.615 0.00 0.00 0.00 2.90
124 125 6.227522 TCATATCGTGGTTGTTTTTCTCAGA 58.772 36.000 0.00 0.00 0.00 3.27
125 126 6.480524 TCATATCGTGGTTGTTTTTCTCAG 57.519 37.500 0.00 0.00 0.00 3.35
126 127 7.447374 AATCATATCGTGGTTGTTTTTCTCA 57.553 32.000 0.00 0.00 27.48 3.27
128 129 9.620660 GTTTAATCATATCGTGGTTGTTTTTCT 57.379 29.630 0.00 0.00 32.22 2.52
138 139 5.355630 TGTTGGTGGTTTAATCATATCGTGG 59.644 40.000 0.00 0.00 0.00 4.94
143 144 7.957002 TGTGTTTGTTGGTGGTTTAATCATAT 58.043 30.769 0.00 0.00 0.00 1.78
179 419 0.399949 AGTCACTTGGTCCCAGTCCA 60.400 55.000 0.00 0.00 0.00 4.02
181 421 0.035458 CCAGTCACTTGGTCCCAGTC 59.965 60.000 0.00 0.00 33.38 3.51
183 423 1.302832 GCCAGTCACTTGGTCCCAG 60.303 63.158 0.00 0.00 40.49 4.45
189 429 2.669569 CCACGGCCAGTCACTTGG 60.670 66.667 2.24 0.00 41.35 3.61
201 441 4.457496 AGCATGACTCGCCCACGG 62.457 66.667 0.00 0.00 40.63 4.94
202 442 2.557059 TACAGCATGACTCGCCCACG 62.557 60.000 0.00 0.00 39.69 4.94
229 469 2.124860 GCCCGGCGGATTAGTTGT 60.125 61.111 30.79 0.00 0.00 3.32
259 499 3.814842 CACTAAACCTCATGAACAGTGCA 59.185 43.478 0.00 0.00 0.00 4.57
290 530 1.800586 CGGGCGGATCAACATGAATAG 59.199 52.381 0.00 0.00 0.00 1.73
317 557 3.113260 ACGGCTGGAGATGCTATAAAC 57.887 47.619 0.00 0.00 0.00 2.01
318 558 3.466836 CAACGGCTGGAGATGCTATAAA 58.533 45.455 0.00 0.00 0.00 1.40
319 559 3.111853 CAACGGCTGGAGATGCTATAA 57.888 47.619 0.00 0.00 0.00 0.98
320 560 2.820059 CAACGGCTGGAGATGCTATA 57.180 50.000 0.00 0.00 0.00 1.31
337 651 4.608514 TGTCCTGGGGGCCTCCAA 62.609 66.667 28.51 9.44 36.21 3.53
338 652 3.908712 ATTGTCCTGGGGGCCTCCA 62.909 63.158 26.87 26.87 37.22 3.86
339 653 2.626467 AATTGTCCTGGGGGCCTCC 61.626 63.158 17.64 17.64 0.00 4.30
340 654 1.380380 CAATTGTCCTGGGGGCCTC 60.380 63.158 0.84 0.00 0.00 4.70
341 655 2.772924 CAATTGTCCTGGGGGCCT 59.227 61.111 0.84 0.00 0.00 5.19
342 656 3.076916 GCAATTGTCCTGGGGGCC 61.077 66.667 7.40 0.00 0.00 5.80
343 657 3.451894 CGCAATTGTCCTGGGGGC 61.452 66.667 7.40 0.00 0.00 5.80
344 658 2.755469 CCGCAATTGTCCTGGGGG 60.755 66.667 7.40 0.00 41.87 5.40
345 659 2.755469 CCCGCAATTGTCCTGGGG 60.755 66.667 15.34 10.96 44.43 4.96
346 660 2.755469 CCCCGCAATTGTCCTGGG 60.755 66.667 15.89 15.89 39.69 4.45
347 661 2.550699 TAGCCCCGCAATTGTCCTGG 62.551 60.000 7.40 4.44 0.00 4.45
348 662 0.679640 TTAGCCCCGCAATTGTCCTG 60.680 55.000 7.40 0.00 0.00 3.86
349 663 0.039035 TTTAGCCCCGCAATTGTCCT 59.961 50.000 7.40 0.00 0.00 3.85
351 665 2.734276 TTTTTAGCCCCGCAATTGTC 57.266 45.000 7.40 0.00 0.00 3.18
352 666 3.430236 GCTATTTTTAGCCCCGCAATTGT 60.430 43.478 7.40 0.00 37.11 2.71
354 668 2.763448 TGCTATTTTTAGCCCCGCAATT 59.237 40.909 2.78 0.00 42.17 2.32
355 669 2.100749 GTGCTATTTTTAGCCCCGCAAT 59.899 45.455 2.78 0.00 42.17 3.56
357 671 1.099689 GTGCTATTTTTAGCCCCGCA 58.900 50.000 2.78 0.00 42.17 5.69
358 672 0.028902 CGTGCTATTTTTAGCCCCGC 59.971 55.000 2.78 0.00 42.17 6.13
359 673 1.329599 GACGTGCTATTTTTAGCCCCG 59.670 52.381 0.00 10.62 42.17 5.73
360 674 1.674441 GGACGTGCTATTTTTAGCCCC 59.326 52.381 0.00 0.00 42.17 5.80
362 676 2.354821 CCAGGACGTGCTATTTTTAGCC 59.645 50.000 10.03 0.00 42.17 3.93
363 677 2.354821 CCCAGGACGTGCTATTTTTAGC 59.645 50.000 10.03 0.00 43.10 3.09
364 678 2.943033 CCCCAGGACGTGCTATTTTTAG 59.057 50.000 10.03 0.00 0.00 1.85
366 680 1.615919 CCCCCAGGACGTGCTATTTTT 60.616 52.381 10.03 0.00 33.47 1.94
367 681 0.034477 CCCCCAGGACGTGCTATTTT 60.034 55.000 10.03 0.00 33.47 1.82
368 682 1.607612 CCCCCAGGACGTGCTATTT 59.392 57.895 10.03 0.00 33.47 1.40
369 683 3.320359 CCCCCAGGACGTGCTATT 58.680 61.111 10.03 0.00 33.47 1.73
383 697 1.790755 GACGAAAATGTTTTGCCCCC 58.209 50.000 0.00 0.00 0.00 5.40
384 698 1.414378 CGACGAAAATGTTTTGCCCC 58.586 50.000 0.00 0.00 0.00 5.80
385 699 1.001158 TCCGACGAAAATGTTTTGCCC 60.001 47.619 0.00 0.00 0.00 5.36
386 700 2.409152 TCCGACGAAAATGTTTTGCC 57.591 45.000 0.00 0.00 0.00 4.52
387 701 3.560503 TCATCCGACGAAAATGTTTTGC 58.439 40.909 0.00 0.00 0.00 3.68
388 702 5.385918 CGTTTCATCCGACGAAAATGTTTTG 60.386 40.000 0.00 0.00 41.53 2.44
389 703 4.673311 CGTTTCATCCGACGAAAATGTTTT 59.327 37.500 0.00 0.00 41.53 2.43
390 704 4.215965 CGTTTCATCCGACGAAAATGTTT 58.784 39.130 0.00 0.00 41.53 2.83
391 705 3.805823 CGTTTCATCCGACGAAAATGTT 58.194 40.909 0.00 0.00 41.53 2.71
392 706 2.412325 GCGTTTCATCCGACGAAAATGT 60.412 45.455 0.00 0.00 41.53 2.71
394 708 1.201877 CGCGTTTCATCCGACGAAAAT 60.202 47.619 0.00 0.00 41.53 1.82
395 709 0.162082 CGCGTTTCATCCGACGAAAA 59.838 50.000 0.00 0.00 41.53 2.29
396 710 0.663867 TCGCGTTTCATCCGACGAAA 60.664 50.000 5.77 0.00 41.53 3.46
398 712 1.513373 CTCGCGTTTCATCCGACGA 60.513 57.895 5.77 0.00 41.53 4.20
399 713 0.521867 TACTCGCGTTTCATCCGACG 60.522 55.000 5.77 0.00 41.89 5.12
400 714 1.836383 ATACTCGCGTTTCATCCGAC 58.164 50.000 5.77 0.00 0.00 4.79
401 715 3.909776 ATATACTCGCGTTTCATCCGA 57.090 42.857 5.77 0.00 0.00 4.55
402 716 4.966850 AAATATACTCGCGTTTCATCCG 57.033 40.909 5.77 0.00 0.00 4.18
403 717 5.333875 GGGAAAATATACTCGCGTTTCATCC 60.334 44.000 5.77 3.08 31.28 3.51
404 718 5.235616 TGGGAAAATATACTCGCGTTTCATC 59.764 40.000 5.77 4.24 31.28 2.92
405 719 5.120399 TGGGAAAATATACTCGCGTTTCAT 58.880 37.500 5.77 0.00 31.28 2.57
406 720 4.505808 TGGGAAAATATACTCGCGTTTCA 58.494 39.130 5.77 0.00 31.28 2.69
407 721 4.552184 GCTGGGAAAATATACTCGCGTTTC 60.552 45.833 5.77 6.78 0.00 2.78
409 723 2.870411 GCTGGGAAAATATACTCGCGTT 59.130 45.455 5.77 0.00 0.00 4.84
411 725 1.798813 GGCTGGGAAAATATACTCGCG 59.201 52.381 0.00 0.00 0.00 5.87
412 726 1.798813 CGGCTGGGAAAATATACTCGC 59.201 52.381 0.00 0.00 0.00 5.03
413 727 3.107642 ACGGCTGGGAAAATATACTCG 57.892 47.619 0.00 0.00 0.00 4.18
414 728 5.465724 CACTAACGGCTGGGAAAATATACTC 59.534 44.000 0.00 0.00 0.00 2.59
418 732 4.196971 GACACTAACGGCTGGGAAAATAT 58.803 43.478 0.00 0.00 0.00 1.28
420 734 2.433436 GACACTAACGGCTGGGAAAAT 58.567 47.619 0.00 0.00 0.00 1.82
421 735 1.543871 GGACACTAACGGCTGGGAAAA 60.544 52.381 0.00 0.00 0.00 2.29
422 736 0.035739 GGACACTAACGGCTGGGAAA 59.964 55.000 0.00 0.00 0.00 3.13
423 737 1.675219 GGACACTAACGGCTGGGAA 59.325 57.895 0.00 0.00 0.00 3.97
424 738 2.288025 GGGACACTAACGGCTGGGA 61.288 63.158 0.00 0.00 0.00 4.37
425 739 2.267961 GGGACACTAACGGCTGGG 59.732 66.667 0.00 0.00 0.00 4.45
426 740 2.267961 GGGGACACTAACGGCTGG 59.732 66.667 0.00 0.00 0.00 4.85
428 742 2.291043 CCTGGGGACACTAACGGCT 61.291 63.158 0.00 0.00 35.60 5.52
429 743 2.267961 CCTGGGGACACTAACGGC 59.732 66.667 0.00 0.00 35.60 5.68
430 744 4.123571 TCCTGGGGACACTAACGG 57.876 61.111 0.00 0.00 35.60 4.44
440 754 0.466922 GCCTCATGATTGTCCTGGGG 60.467 60.000 0.00 0.00 35.96 4.96
441 755 0.256752 TGCCTCATGATTGTCCTGGG 59.743 55.000 0.00 0.00 0.00 4.45
442 756 2.133281 TTGCCTCATGATTGTCCTGG 57.867 50.000 0.00 0.00 0.00 4.45
444 758 4.021719 CACTTTTTGCCTCATGATTGTCCT 60.022 41.667 0.00 0.00 0.00 3.85
445 759 4.022068 TCACTTTTTGCCTCATGATTGTCC 60.022 41.667 0.00 0.00 0.00 4.02
446 760 5.125100 TCACTTTTTGCCTCATGATTGTC 57.875 39.130 0.00 0.00 0.00 3.18
448 762 6.403333 CAATCACTTTTTGCCTCATGATTG 57.597 37.500 9.60 9.60 43.91 2.67
449 763 4.933400 GCAATCACTTTTTGCCTCATGATT 59.067 37.500 0.00 0.00 42.84 2.57
450 764 4.501071 GCAATCACTTTTTGCCTCATGAT 58.499 39.130 0.00 0.00 42.84 2.45
451 765 3.612241 CGCAATCACTTTTTGCCTCATGA 60.612 43.478 0.00 0.00 45.19 3.07
452 766 2.664568 CGCAATCACTTTTTGCCTCATG 59.335 45.455 3.08 0.00 45.19 3.07
453 767 2.297033 ACGCAATCACTTTTTGCCTCAT 59.703 40.909 3.08 0.00 45.19 2.90
454 768 1.680735 ACGCAATCACTTTTTGCCTCA 59.319 42.857 3.08 0.00 45.19 3.86
455 769 2.053627 CACGCAATCACTTTTTGCCTC 58.946 47.619 3.08 0.00 45.19 4.70
457 771 1.139163 CCACGCAATCACTTTTTGCC 58.861 50.000 3.08 0.00 45.19 4.52
458 772 1.139163 CCCACGCAATCACTTTTTGC 58.861 50.000 0.00 0.00 44.68 3.68
460 774 0.033366 GGCCCACGCAATCACTTTTT 59.967 50.000 0.00 0.00 36.38 1.94
461 775 1.112315 TGGCCCACGCAATCACTTTT 61.112 50.000 0.00 0.00 36.38 2.27
464 778 1.973281 CTTGGCCCACGCAATCACT 60.973 57.895 0.00 0.00 36.38 3.41
465 779 1.523154 TTCTTGGCCCACGCAATCAC 61.523 55.000 0.00 0.00 36.38 3.06
466 780 0.825425 TTTCTTGGCCCACGCAATCA 60.825 50.000 0.00 0.00 36.38 2.57
468 782 0.755686 TTTTTCTTGGCCCACGCAAT 59.244 45.000 0.00 0.00 36.38 3.56
469 783 0.103937 CTTTTTCTTGGCCCACGCAA 59.896 50.000 0.00 0.00 36.38 4.85
470 784 1.739049 CTTTTTCTTGGCCCACGCA 59.261 52.632 0.00 0.00 36.38 5.24
471 785 1.006220 CCTTTTTCTTGGCCCACGC 60.006 57.895 0.00 0.00 0.00 5.34
472 786 0.313987 GTCCTTTTTCTTGGCCCACG 59.686 55.000 0.00 0.00 0.00 4.94
473 787 0.313987 CGTCCTTTTTCTTGGCCCAC 59.686 55.000 0.00 0.00 0.00 4.61
478 792 1.463444 CCTACGCGTCCTTTTTCTTGG 59.537 52.381 18.63 0.00 0.00 3.61
479 793 1.463444 CCCTACGCGTCCTTTTTCTTG 59.537 52.381 18.63 0.00 0.00 3.02
480 794 1.609841 CCCCTACGCGTCCTTTTTCTT 60.610 52.381 18.63 0.00 0.00 2.52
481 795 0.036671 CCCCTACGCGTCCTTTTTCT 60.037 55.000 18.63 0.00 0.00 2.52
483 797 0.397564 TTCCCCTACGCGTCCTTTTT 59.602 50.000 18.63 0.00 0.00 1.94
484 798 0.616891 ATTCCCCTACGCGTCCTTTT 59.383 50.000 18.63 0.00 0.00 2.27
485 799 1.488390 TATTCCCCTACGCGTCCTTT 58.512 50.000 18.63 0.00 0.00 3.11
487 801 0.966920 CATATTCCCCTACGCGTCCT 59.033 55.000 18.63 0.00 0.00 3.85
488 802 0.963962 TCATATTCCCCTACGCGTCC 59.036 55.000 18.63 0.00 0.00 4.79
490 804 2.289444 CCAATCATATTCCCCTACGCGT 60.289 50.000 19.17 19.17 0.00 6.01
494 808 5.652452 GCAATACCCAATCATATTCCCCTAC 59.348 44.000 0.00 0.00 0.00 3.18
495 809 5.555542 AGCAATACCCAATCATATTCCCCTA 59.444 40.000 0.00 0.00 0.00 3.53
496 810 4.358006 AGCAATACCCAATCATATTCCCCT 59.642 41.667 0.00 0.00 0.00 4.79
498 812 6.670695 AAAGCAATACCCAATCATATTCCC 57.329 37.500 0.00 0.00 0.00 3.97
500 814 8.819974 CAACAAAAGCAATACCCAATCATATTC 58.180 33.333 0.00 0.00 0.00 1.75
502 816 7.274447 CCAACAAAAGCAATACCCAATCATAT 58.726 34.615 0.00 0.00 0.00 1.78
503 817 6.638610 CCAACAAAAGCAATACCCAATCATA 58.361 36.000 0.00 0.00 0.00 2.15
504 818 5.490159 CCAACAAAAGCAATACCCAATCAT 58.510 37.500 0.00 0.00 0.00 2.45
506 820 3.684305 GCCAACAAAAGCAATACCCAATC 59.316 43.478 0.00 0.00 0.00 2.67
507 821 3.673902 GCCAACAAAAGCAATACCCAAT 58.326 40.909 0.00 0.00 0.00 3.16
512 826 1.067693 GGCGCCAACAAAAGCAATAC 58.932 50.000 24.80 0.00 0.00 1.89
513 827 0.037790 GGGCGCCAACAAAAGCAATA 60.038 50.000 30.85 0.00 0.00 1.90
514 828 1.301637 GGGCGCCAACAAAAGCAAT 60.302 52.632 30.85 0.00 0.00 3.56
515 829 2.107953 GGGCGCCAACAAAAGCAA 59.892 55.556 30.85 0.00 0.00 3.91
516 830 3.922640 GGGGCGCCAACAAAAGCA 61.923 61.111 30.85 0.00 0.00 3.91
517 831 4.680237 GGGGGCGCCAACAAAAGC 62.680 66.667 30.85 7.76 0.00 3.51
518 832 2.801631 TTGGGGGCGCCAACAAAAG 61.802 57.895 29.82 0.00 0.00 2.27
519 833 2.764128 TTGGGGGCGCCAACAAAA 60.764 55.556 29.82 15.16 0.00 2.44
520 834 3.541713 GTTGGGGGCGCCAACAAA 61.542 61.111 43.64 22.29 44.63 2.83
529 843 4.607025 TTCGGGGTTGTTGGGGGC 62.607 66.667 0.00 0.00 0.00 5.80
533 1002 1.362355 GTGCTTTCGGGGTTGTTGG 59.638 57.895 0.00 0.00 0.00 3.77
535 1004 2.841160 GCGTGCTTTCGGGGTTGTT 61.841 57.895 0.00 0.00 0.00 2.83
542 1011 2.577763 GAAATCCGGCGTGCTTTCGG 62.578 60.000 6.01 2.18 44.59 4.30
545 1014 2.867472 CGAAATCCGGCGTGCTTT 59.133 55.556 6.01 1.99 33.91 3.51
555 1024 1.215382 GCAAACCCAGGCGAAATCC 59.785 57.895 0.00 0.00 0.00 3.01
556 1025 0.109132 CTGCAAACCCAGGCGAAATC 60.109 55.000 0.00 0.00 0.00 2.17
557 1026 0.539438 TCTGCAAACCCAGGCGAAAT 60.539 50.000 0.00 0.00 33.64 2.17
558 1027 1.152860 TCTGCAAACCCAGGCGAAA 60.153 52.632 0.00 0.00 33.64 3.46
559 1028 1.896660 GTCTGCAAACCCAGGCGAA 60.897 57.895 0.00 0.00 33.64 4.70
562 1031 4.043200 GCGTCTGCAAACCCAGGC 62.043 66.667 0.00 0.00 42.15 4.85
564 1033 1.455383 AAAGGCGTCTGCAAACCCAG 61.455 55.000 0.00 0.00 45.35 4.45
565 1034 1.040339 AAAAGGCGTCTGCAAACCCA 61.040 50.000 0.00 0.00 45.35 4.51
567 1036 1.202359 TCAAAAAGGCGTCTGCAAACC 60.202 47.619 0.00 0.00 45.35 3.27
568 1037 2.119457 CTCAAAAAGGCGTCTGCAAAC 58.881 47.619 0.00 0.00 45.35 2.93
569 1038 1.066908 CCTCAAAAAGGCGTCTGCAAA 59.933 47.619 0.00 0.00 45.35 3.68
570 1039 0.667993 CCTCAAAAAGGCGTCTGCAA 59.332 50.000 0.00 0.00 45.35 4.08
571 1040 2.330254 CCTCAAAAAGGCGTCTGCA 58.670 52.632 0.00 0.00 45.35 4.41
581 1050 1.975660 CGTCCCCAAGACCTCAAAAA 58.024 50.000 0.00 0.00 43.08 1.94
582 1051 0.536460 GCGTCCCCAAGACCTCAAAA 60.536 55.000 0.00 0.00 43.08 2.44
583 1052 1.072505 GCGTCCCCAAGACCTCAAA 59.927 57.895 0.00 0.00 43.08 2.69
584 1053 1.415672 AAGCGTCCCCAAGACCTCAA 61.416 55.000 0.00 0.00 43.08 3.02
585 1054 1.841556 AAGCGTCCCCAAGACCTCA 60.842 57.895 0.00 0.00 43.08 3.86
587 1056 2.750350 CAAGCGTCCCCAAGACCT 59.250 61.111 0.00 0.00 43.08 3.85
588 1057 2.359975 CCAAGCGTCCCCAAGACC 60.360 66.667 0.00 0.00 43.08 3.85
596 1065 4.424711 TCATGCCCCCAAGCGTCC 62.425 66.667 0.00 0.00 34.65 4.79
597 1066 3.134127 GTCATGCCCCCAAGCGTC 61.134 66.667 0.00 0.00 34.65 5.19
598 1067 3.650950 AGTCATGCCCCCAAGCGT 61.651 61.111 0.00 0.00 34.65 5.07
599 1068 3.136123 CAGTCATGCCCCCAAGCG 61.136 66.667 0.00 0.00 34.65 4.68
600 1069 2.757099 CCAGTCATGCCCCCAAGC 60.757 66.667 0.00 0.00 0.00 4.01
601 1070 2.757099 GCCAGTCATGCCCCCAAG 60.757 66.667 0.00 0.00 0.00 3.61
602 1071 4.380945 GGCCAGTCATGCCCCCAA 62.381 66.667 0.00 0.00 43.33 4.12
633 2356 6.740110 ACTTTTTGTGTGCCGATAATGTAAA 58.260 32.000 0.00 0.00 0.00 2.01
634 2357 6.320494 ACTTTTTGTGTGCCGATAATGTAA 57.680 33.333 0.00 0.00 0.00 2.41
636 2359 4.846779 ACTTTTTGTGTGCCGATAATGT 57.153 36.364 0.00 0.00 0.00 2.71
637 2360 4.793216 GCTACTTTTTGTGTGCCGATAATG 59.207 41.667 0.00 0.00 0.00 1.90
638 2361 4.142469 GGCTACTTTTTGTGTGCCGATAAT 60.142 41.667 0.00 0.00 38.84 1.28
639 2362 3.189702 GGCTACTTTTTGTGTGCCGATAA 59.810 43.478 0.00 0.00 38.84 1.75
640 2363 2.745281 GGCTACTTTTTGTGTGCCGATA 59.255 45.455 0.00 0.00 38.84 2.92
641 2364 1.539827 GGCTACTTTTTGTGTGCCGAT 59.460 47.619 0.00 0.00 38.84 4.18
642 2365 0.948678 GGCTACTTTTTGTGTGCCGA 59.051 50.000 0.00 0.00 38.84 5.54
643 2366 0.951558 AGGCTACTTTTTGTGTGCCG 59.048 50.000 0.00 0.00 46.55 5.69
645 2368 2.545742 CCCAAGGCTACTTTTTGTGTGC 60.546 50.000 0.00 0.00 33.81 4.57
646 2369 2.035832 CCCCAAGGCTACTTTTTGTGTG 59.964 50.000 0.00 0.00 33.81 3.82
647 2370 2.316108 CCCCAAGGCTACTTTTTGTGT 58.684 47.619 0.00 0.00 33.81 3.72
648 2371 1.618343 CCCCCAAGGCTACTTTTTGTG 59.382 52.381 0.00 0.00 33.81 3.33
649 2372 1.219469 ACCCCCAAGGCTACTTTTTGT 59.781 47.619 0.00 0.00 40.58 2.83
650 2373 2.009681 ACCCCCAAGGCTACTTTTTG 57.990 50.000 0.00 0.00 40.58 2.44
651 2374 2.179204 AGAACCCCCAAGGCTACTTTTT 59.821 45.455 0.00 0.00 40.58 1.94
652 2375 1.787058 AGAACCCCCAAGGCTACTTTT 59.213 47.619 0.00 0.00 40.58 2.27
653 2376 1.456919 AGAACCCCCAAGGCTACTTT 58.543 50.000 0.00 0.00 40.58 2.66
654 2377 1.075536 CAAGAACCCCCAAGGCTACTT 59.924 52.381 0.00 0.00 40.58 2.24
655 2378 0.698818 CAAGAACCCCCAAGGCTACT 59.301 55.000 0.00 0.00 40.58 2.57
656 2379 0.323451 CCAAGAACCCCCAAGGCTAC 60.323 60.000 0.00 0.00 40.58 3.58
657 2380 1.506028 CCCAAGAACCCCCAAGGCTA 61.506 60.000 0.00 0.00 40.58 3.93
658 2381 2.854076 CCAAGAACCCCCAAGGCT 59.146 61.111 0.00 0.00 40.58 4.58
659 2382 2.283894 CCCAAGAACCCCCAAGGC 60.284 66.667 0.00 0.00 40.58 4.35
660 2383 2.445155 CCCCAAGAACCCCCAAGG 59.555 66.667 0.00 0.00 43.78 3.61
661 2384 2.445155 CCCCCAAGAACCCCCAAG 59.555 66.667 0.00 0.00 0.00 3.61
662 2385 3.922364 GCCCCCAAGAACCCCCAA 61.922 66.667 0.00 0.00 0.00 4.12
678 2401 3.934684 GAGCATCTTCAGCCGCGC 61.935 66.667 0.00 0.00 0.00 6.86
694 2417 1.348064 ACGGTGACATCCCTTCAAGA 58.652 50.000 0.00 0.00 0.00 3.02
695 2418 2.028476 TGTACGGTGACATCCCTTCAAG 60.028 50.000 0.00 0.00 0.00 3.02
696 2419 1.972075 TGTACGGTGACATCCCTTCAA 59.028 47.619 0.00 0.00 0.00 2.69
697 2420 1.634960 TGTACGGTGACATCCCTTCA 58.365 50.000 0.00 0.00 0.00 3.02
698 2421 2.981859 ATGTACGGTGACATCCCTTC 57.018 50.000 0.00 0.00 34.97 3.46
699 2422 3.008594 TGAAATGTACGGTGACATCCCTT 59.991 43.478 1.03 0.00 39.16 3.95
700 2423 2.569853 TGAAATGTACGGTGACATCCCT 59.430 45.455 1.03 0.00 39.16 4.20
701 2424 2.676342 GTGAAATGTACGGTGACATCCC 59.324 50.000 1.03 0.00 39.16 3.85
702 2425 2.676342 GGTGAAATGTACGGTGACATCC 59.324 50.000 1.03 0.00 39.16 3.51
703 2426 2.347452 CGGTGAAATGTACGGTGACATC 59.653 50.000 1.03 0.00 39.16 3.06
704 2427 2.343101 CGGTGAAATGTACGGTGACAT 58.657 47.619 0.00 0.00 41.92 3.06
705 2428 1.605968 CCGGTGAAATGTACGGTGACA 60.606 52.381 0.00 0.00 41.34 3.58
706 2429 1.073177 CCGGTGAAATGTACGGTGAC 58.927 55.000 0.00 0.00 41.34 3.67
707 2430 3.518381 CCGGTGAAATGTACGGTGA 57.482 52.632 0.00 0.00 41.34 4.02
710 2433 3.766122 ACATTGCCGGTGAAATGTACGG 61.766 50.000 22.65 0.00 43.43 4.02
711 2434 1.466950 ACATTGCCGGTGAAATGTACG 59.533 47.619 22.65 5.71 43.43 3.67
712 2435 2.486203 TGACATTGCCGGTGAAATGTAC 59.514 45.455 23.47 18.48 44.83 2.90
713 2436 2.486203 GTGACATTGCCGGTGAAATGTA 59.514 45.455 23.47 13.85 44.83 2.29
714 2437 1.269448 GTGACATTGCCGGTGAAATGT 59.731 47.619 23.58 23.58 46.87 2.71
715 2438 1.402720 GGTGACATTGCCGGTGAAATG 60.403 52.381 19.02 19.02 39.26 2.32
716 2439 0.887933 GGTGACATTGCCGGTGAAAT 59.112 50.000 1.90 0.00 0.00 2.17
717 2440 1.175983 GGGTGACATTGCCGGTGAAA 61.176 55.000 1.90 0.00 0.00 2.69
718 2441 1.602323 GGGTGACATTGCCGGTGAA 60.602 57.895 1.90 0.00 0.00 3.18
719 2442 2.033448 GGGTGACATTGCCGGTGA 59.967 61.111 1.90 0.00 0.00 4.02
720 2443 3.430862 CGGGTGACATTGCCGGTG 61.431 66.667 1.90 0.00 0.00 4.94
721 2444 2.869503 GATCGGGTGACATTGCCGGT 62.870 60.000 1.90 0.00 0.00 5.28
722 2445 2.124736 ATCGGGTGACATTGCCGG 60.125 61.111 0.00 0.00 0.00 6.13
723 2446 1.153369 AGATCGGGTGACATTGCCG 60.153 57.895 0.00 0.00 0.00 5.69
724 2447 0.107703 TGAGATCGGGTGACATTGCC 60.108 55.000 0.00 0.00 0.00 4.52
725 2448 1.293924 CTGAGATCGGGTGACATTGC 58.706 55.000 0.00 0.00 0.00 3.56
726 2449 2.544685 GACTGAGATCGGGTGACATTG 58.455 52.381 0.00 0.00 0.00 2.82
727 2450 1.482593 GGACTGAGATCGGGTGACATT 59.517 52.381 0.00 0.00 0.00 2.71
728 2451 1.115467 GGACTGAGATCGGGTGACAT 58.885 55.000 0.00 0.00 0.00 3.06
729 2452 0.970937 GGGACTGAGATCGGGTGACA 60.971 60.000 0.00 0.00 0.00 3.58
730 2453 0.970937 TGGGACTGAGATCGGGTGAC 60.971 60.000 0.00 0.00 0.00 3.67
731 2454 0.252057 TTGGGACTGAGATCGGGTGA 60.252 55.000 0.00 0.00 0.00 4.02
732 2455 0.108138 GTTGGGACTGAGATCGGGTG 60.108 60.000 0.00 0.00 0.00 4.61
733 2456 0.544357 TGTTGGGACTGAGATCGGGT 60.544 55.000 0.00 0.00 0.00 5.28
734 2457 0.613260 TTGTTGGGACTGAGATCGGG 59.387 55.000 0.00 0.00 0.00 5.14
735 2458 2.555199 GATTGTTGGGACTGAGATCGG 58.445 52.381 0.00 0.00 0.00 4.18
736 2459 2.093500 TGGATTGTTGGGACTGAGATCG 60.093 50.000 0.00 0.00 0.00 3.69
737 2460 3.634397 TGGATTGTTGGGACTGAGATC 57.366 47.619 0.00 0.00 0.00 2.75
738 2461 5.610132 AGATATGGATTGTTGGGACTGAGAT 59.390 40.000 0.00 0.00 0.00 2.75
739 2462 4.971282 AGATATGGATTGTTGGGACTGAGA 59.029 41.667 0.00 0.00 0.00 3.27
742 2465 7.175641 GGATAAAGATATGGATTGTTGGGACTG 59.824 40.741 0.00 0.00 0.00 3.51
749 2472 5.630121 TGCGGGATAAAGATATGGATTGTT 58.370 37.500 0.00 0.00 0.00 2.83
752 2475 7.004086 TCTTTTGCGGGATAAAGATATGGATT 58.996 34.615 0.00 0.00 35.93 3.01
776 2499 7.489757 GTCCTCTGCGTAAAGATATGGATATTC 59.510 40.741 0.00 0.00 0.00 1.75
779 2502 5.773176 TGTCCTCTGCGTAAAGATATGGATA 59.227 40.000 0.00 0.00 0.00 2.59
926 2665 2.124695 GGGATTCCACGGAGGTGC 60.125 66.667 4.80 0.00 43.00 5.01
928 2667 2.124085 TGGGGATTCCACGGAGGT 59.876 61.111 4.80 0.00 41.46 3.85
935 2674 0.178947 GTTGGTGGTTGGGGATTCCA 60.179 55.000 4.80 0.00 45.43 3.53
937 2677 0.178947 TGGTTGGTGGTTGGGGATTC 60.179 55.000 0.00 0.00 0.00 2.52
944 2684 1.715785 AGGGATTTGGTTGGTGGTTG 58.284 50.000 0.00 0.00 0.00 3.77
1098 8270 2.609610 AACTGGAGCCCGGCCTTA 60.610 61.111 5.55 0.00 32.02 2.69
1363 8535 1.905843 CCGGGTTGATGTTGGGCAA 60.906 57.895 0.00 0.00 0.00 4.52
1446 8618 1.465172 GGCCTTCTTGGGGGACTTT 59.535 57.895 0.00 0.00 36.00 2.66
1526 8723 6.932960 AGATTTCTGAATTGCTTTTTCTTGGG 59.067 34.615 0.00 0.00 0.00 4.12
1537 8736 6.601741 ATCGAAGAGAGATTTCTGAATTGC 57.398 37.500 0.00 0.00 43.63 3.56
1622 8824 2.337583 TCTGACATTTTCCTCTTCGCG 58.662 47.619 0.00 0.00 0.00 5.87
1687 8901 5.588648 ACCGTAACTATGCTAACATTGCAAT 59.411 36.000 5.99 5.99 44.01 3.56
1705 8919 5.223449 AGATCTGAGTTTTTCCACCGTAA 57.777 39.130 0.00 0.00 0.00 3.18
1707 8921 3.771577 AGATCTGAGTTTTTCCACCGT 57.228 42.857 0.00 0.00 0.00 4.83
1728 8943 9.533253 AAGAAAGAAATGTTGACAAATTCGAAT 57.467 25.926 4.39 4.39 33.62 3.34
1803 9033 6.773976 TCTCAACTGATTTTGGTTCACTTT 57.226 33.333 0.00 0.00 0.00 2.66
1836 9067 3.424433 CGAAAATTACTCTGCGTGGGAAC 60.424 47.826 0.00 0.00 0.00 3.62
1866 9097 2.364632 CTCCAACCAATTCCATACGCA 58.635 47.619 0.00 0.00 0.00 5.24
1872 9103 3.858886 TTGGCTCCAACCAATTCCA 57.141 47.368 0.00 0.00 44.80 3.53
1904 9141 0.744874 GGGTTGTCATCCTCGATCGA 59.255 55.000 18.32 18.32 0.00 3.59
1935 9172 4.412199 ACCAAGCTCTAGTATTTGCCCATA 59.588 41.667 0.00 0.00 0.00 2.74
1954 9191 4.056050 GTCTACTTTTCGCTTGAGACCAA 58.944 43.478 0.00 0.00 0.00 3.67
2010 9273 3.068024 GGCGATTGAAGATGCCCATAAAA 59.932 43.478 0.00 0.00 41.70 1.52
2039 9302 2.223805 GGCATTTGGGATGTCCGATTTC 60.224 50.000 0.00 0.00 38.76 2.17
2084 9347 2.555547 GCTGGCAGTTGGCTTTCGT 61.556 57.895 17.16 0.00 44.01 3.85
2087 9350 1.905354 GAGGCTGGCAGTTGGCTTT 60.905 57.895 17.16 0.00 44.01 3.51
2099 9362 1.533625 TCCGGTTTGAAATGAGGCTG 58.466 50.000 0.00 0.00 0.00 4.85
2135 9398 0.038890 TCCCGGTTGCATGAATTCCA 59.961 50.000 0.00 0.00 0.00 3.53
2136 9399 0.455815 GTCCCGGTTGCATGAATTCC 59.544 55.000 0.00 0.00 0.00 3.01
2208 9471 6.349611 CCATAGCTAGCTCAACACACATTTTT 60.350 38.462 23.26 0.00 0.00 1.94
2209 9472 5.124457 CCATAGCTAGCTCAACACACATTTT 59.876 40.000 23.26 0.00 0.00 1.82
2210 9473 4.637534 CCATAGCTAGCTCAACACACATTT 59.362 41.667 23.26 0.00 0.00 2.32
2211 9474 4.080919 TCCATAGCTAGCTCAACACACATT 60.081 41.667 23.26 0.00 0.00 2.71
2223 9535 4.808414 TGGTGATACATCCATAGCTAGC 57.192 45.455 6.62 6.62 0.00 3.42
2239 9551 4.155709 TGGCTTGTTGGAATTTATGGTGA 58.844 39.130 0.00 0.00 0.00 4.02
2240 9552 4.533919 TGGCTTGTTGGAATTTATGGTG 57.466 40.909 0.00 0.00 0.00 4.17
2241 9553 4.162131 GGATGGCTTGTTGGAATTTATGGT 59.838 41.667 0.00 0.00 0.00 3.55
2244 9556 5.248020 TGTTGGATGGCTTGTTGGAATTTAT 59.752 36.000 0.00 0.00 0.00 1.40
2331 9882 3.985279 GGGTCAAAACACGAAATTTAGCC 59.015 43.478 0.00 0.00 0.00 3.93
2332 9883 4.866921 AGGGTCAAAACACGAAATTTAGC 58.133 39.130 0.00 0.00 32.44 3.09
2333 9884 7.704899 AGAAAAGGGTCAAAACACGAAATTTAG 59.295 33.333 0.00 0.00 32.44 1.85
2334 9885 7.489757 CAGAAAAGGGTCAAAACACGAAATTTA 59.510 33.333 0.00 0.00 32.44 1.40
2335 9886 6.312672 CAGAAAAGGGTCAAAACACGAAATTT 59.687 34.615 0.00 0.00 32.44 1.82
2336 9887 5.810074 CAGAAAAGGGTCAAAACACGAAATT 59.190 36.000 0.00 0.00 32.44 1.82
2337 9888 5.126384 TCAGAAAAGGGTCAAAACACGAAAT 59.874 36.000 0.00 0.00 32.44 2.17
2338 9889 4.459685 TCAGAAAAGGGTCAAAACACGAAA 59.540 37.500 0.00 0.00 32.44 3.46
2339 9890 4.011023 TCAGAAAAGGGTCAAAACACGAA 58.989 39.130 0.00 0.00 32.44 3.85
2340 9891 3.611970 TCAGAAAAGGGTCAAAACACGA 58.388 40.909 0.00 0.00 32.44 4.35
2341 9892 4.364415 TTCAGAAAAGGGTCAAAACACG 57.636 40.909 0.00 0.00 32.44 4.49
2342 9893 4.868171 GGTTTCAGAAAAGGGTCAAAACAC 59.132 41.667 0.00 0.00 31.85 3.32
2343 9894 4.775253 AGGTTTCAGAAAAGGGTCAAAACA 59.225 37.500 0.00 0.00 31.85 2.83
2344 9895 5.339008 AGGTTTCAGAAAAGGGTCAAAAC 57.661 39.130 0.00 0.00 0.00 2.43
2345 9896 7.343316 TGAATAGGTTTCAGAAAAGGGTCAAAA 59.657 33.333 0.00 0.00 0.00 2.44
2346 9897 6.836527 TGAATAGGTTTCAGAAAAGGGTCAAA 59.163 34.615 0.00 0.00 0.00 2.69
2347 9898 6.369629 TGAATAGGTTTCAGAAAAGGGTCAA 58.630 36.000 0.00 0.00 0.00 3.18
2348 9899 5.947663 TGAATAGGTTTCAGAAAAGGGTCA 58.052 37.500 0.00 0.00 0.00 4.02
2349 9900 6.715264 TCTTGAATAGGTTTCAGAAAAGGGTC 59.285 38.462 0.00 0.00 0.00 4.46
2350 9901 6.610830 TCTTGAATAGGTTTCAGAAAAGGGT 58.389 36.000 0.00 0.00 0.00 4.34
2351 9902 7.613411 AGATCTTGAATAGGTTTCAGAAAAGGG 59.387 37.037 0.00 0.00 0.00 3.95
2352 9903 8.457261 CAGATCTTGAATAGGTTTCAGAAAAGG 58.543 37.037 0.00 0.00 0.00 3.11
2353 9904 9.224267 TCAGATCTTGAATAGGTTTCAGAAAAG 57.776 33.333 0.00 0.00 31.34 2.27
2354 9905 9.003658 GTCAGATCTTGAATAGGTTTCAGAAAA 57.996 33.333 0.00 0.00 37.61 2.29
2355 9906 7.607991 GGTCAGATCTTGAATAGGTTTCAGAAA 59.392 37.037 0.00 0.00 37.61 2.52
2356 9907 7.106239 GGTCAGATCTTGAATAGGTTTCAGAA 58.894 38.462 0.00 0.00 37.61 3.02
2357 9908 6.352222 GGGTCAGATCTTGAATAGGTTTCAGA 60.352 42.308 0.00 0.00 37.61 3.27
2358 9909 5.819901 GGGTCAGATCTTGAATAGGTTTCAG 59.180 44.000 0.00 0.00 37.61 3.02
2359 9910 5.488919 AGGGTCAGATCTTGAATAGGTTTCA 59.511 40.000 0.00 0.00 37.61 2.69
2360 9911 5.995446 AGGGTCAGATCTTGAATAGGTTTC 58.005 41.667 0.00 0.00 37.61 2.78
2361 9912 6.674419 ACTAGGGTCAGATCTTGAATAGGTTT 59.326 38.462 0.00 0.00 37.61 3.27
2362 9913 6.206042 ACTAGGGTCAGATCTTGAATAGGTT 58.794 40.000 0.00 0.00 37.61 3.50
2363 9914 5.782925 ACTAGGGTCAGATCTTGAATAGGT 58.217 41.667 0.00 0.00 37.61 3.08
2364 9915 6.739331 AACTAGGGTCAGATCTTGAATAGG 57.261 41.667 0.00 0.00 37.61 2.57
2365 9916 7.786030 TCAAACTAGGGTCAGATCTTGAATAG 58.214 38.462 0.00 0.00 37.61 1.73
2366 9917 7.733773 TCAAACTAGGGTCAGATCTTGAATA 57.266 36.000 0.00 0.00 37.61 1.75
2367 9918 6.627087 TCAAACTAGGGTCAGATCTTGAAT 57.373 37.500 0.00 0.00 37.61 2.57
2368 9919 6.627087 ATCAAACTAGGGTCAGATCTTGAA 57.373 37.500 0.00 0.00 37.61 2.69
2369 9920 6.627087 AATCAAACTAGGGTCAGATCTTGA 57.373 37.500 0.00 0.00 0.00 3.02
2370 9921 7.693969 AAAATCAAACTAGGGTCAGATCTTG 57.306 36.000 0.00 0.00 0.00 3.02
2395 9946 4.895297 AGCAAAAGGGTCAGATCTCAAAAA 59.105 37.500 0.00 0.00 0.00 1.94
2396 9947 4.473444 AGCAAAAGGGTCAGATCTCAAAA 58.527 39.130 0.00 0.00 0.00 2.44
2397 9948 4.104383 AGCAAAAGGGTCAGATCTCAAA 57.896 40.909 0.00 0.00 0.00 2.69
2398 9949 3.795688 AGCAAAAGGGTCAGATCTCAA 57.204 42.857 0.00 0.00 0.00 3.02
2399 9950 3.055094 GGTAGCAAAAGGGTCAGATCTCA 60.055 47.826 0.00 0.00 0.00 3.27
2400 9951 3.536570 GGTAGCAAAAGGGTCAGATCTC 58.463 50.000 0.00 0.00 0.00 2.75
2401 9952 2.093447 CGGTAGCAAAAGGGTCAGATCT 60.093 50.000 0.00 0.00 0.00 2.75
2402 9953 2.280628 CGGTAGCAAAAGGGTCAGATC 58.719 52.381 0.00 0.00 0.00 2.75
2403 9954 1.065418 CCGGTAGCAAAAGGGTCAGAT 60.065 52.381 0.00 0.00 0.00 2.90
2404 9955 0.323629 CCGGTAGCAAAAGGGTCAGA 59.676 55.000 0.00 0.00 0.00 3.27
2405 9956 1.305930 GCCGGTAGCAAAAGGGTCAG 61.306 60.000 1.90 0.00 42.97 3.51
2406 9957 1.302993 GCCGGTAGCAAAAGGGTCA 60.303 57.895 1.90 0.00 42.97 4.02
2407 9958 3.587095 GCCGGTAGCAAAAGGGTC 58.413 61.111 1.90 0.00 42.97 4.46
2423 9974 3.757248 CTACCGCCATGGACCCTGC 62.757 68.421 18.40 0.00 42.00 4.85
2424 9975 2.505982 CTACCGCCATGGACCCTG 59.494 66.667 18.40 0.04 42.00 4.45
2425 9976 2.768344 CCTACCGCCATGGACCCT 60.768 66.667 18.40 0.00 42.00 4.34
2426 9977 3.873812 CCCTACCGCCATGGACCC 61.874 72.222 18.40 0.00 42.00 4.46
2427 9978 1.125711 ATACCCTACCGCCATGGACC 61.126 60.000 18.40 0.00 42.00 4.46
2428 9979 1.636148 TATACCCTACCGCCATGGAC 58.364 55.000 18.40 5.97 42.00 4.02
2429 9980 1.972795 GTTATACCCTACCGCCATGGA 59.027 52.381 18.40 0.00 42.00 3.41
2430 9981 1.695242 TGTTATACCCTACCGCCATGG 59.305 52.381 7.63 7.63 46.41 3.66
2431 9982 2.870435 GCTGTTATACCCTACCGCCATG 60.870 54.545 0.00 0.00 0.00 3.66
2432 9983 1.346722 GCTGTTATACCCTACCGCCAT 59.653 52.381 0.00 0.00 0.00 4.40
2433 9984 0.754472 GCTGTTATACCCTACCGCCA 59.246 55.000 0.00 0.00 0.00 5.69
2434 9985 0.034476 GGCTGTTATACCCTACCGCC 59.966 60.000 0.00 0.00 37.46 6.13
2435 9986 1.046204 AGGCTGTTATACCCTACCGC 58.954 55.000 0.00 0.00 0.00 5.68
2436 9987 3.930634 GTAGGCTGTTATACCCTACCG 57.069 52.381 0.00 0.00 43.31 4.02
2438 9989 2.029560 GCGGTAGGCTGTTATACCCTAC 60.030 54.545 0.00 7.39 46.60 3.18
2439 9990 2.242043 GCGGTAGGCTGTTATACCCTA 58.758 52.381 0.00 0.00 38.60 3.53
2440 9991 1.046204 GCGGTAGGCTGTTATACCCT 58.954 55.000 0.00 0.00 38.60 4.34
2441 9992 0.034476 GGCGGTAGGCTGTTATACCC 59.966 60.000 0.00 0.00 42.94 3.69
2442 9993 0.754472 TGGCGGTAGGCTGTTATACC 59.246 55.000 0.00 0.00 44.18 2.73
2443 9994 2.480845 CTTGGCGGTAGGCTGTTATAC 58.519 52.381 0.00 0.00 44.18 1.47
2444 9995 1.414919 CCTTGGCGGTAGGCTGTTATA 59.585 52.381 0.00 0.00 44.18 0.98
2445 9996 0.180406 CCTTGGCGGTAGGCTGTTAT 59.820 55.000 0.00 0.00 44.18 1.89
2446 9997 1.196104 ACCTTGGCGGTAGGCTGTTA 61.196 55.000 0.00 0.00 46.73 2.41
2447 9998 2.351276 CCTTGGCGGTAGGCTGTT 59.649 61.111 0.00 0.00 44.18 3.16
2448 9999 2.928396 ACCTTGGCGGTAGGCTGT 60.928 61.111 0.00 0.00 46.73 4.40
2459 10010 3.006728 TACCGCCAGGGACCTTGG 61.007 66.667 18.34 18.34 43.47 3.61
2460 10011 2.584608 CTACCGCCAGGGACCTTG 59.415 66.667 0.00 0.00 43.47 3.61
2461 10012 2.687566 CCTACCGCCAGGGACCTT 60.688 66.667 0.00 0.00 43.47 3.50


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.