Multiple sequence alignment - TraesCS7B01G335400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G335400 chr7B 100.000 2713 0 0 1 2713 590254546 590257258 0.000000e+00 5011.0
1 TraesCS7B01G335400 chr7B 87.047 772 40 17 528 1250 73143775 73144535 0.000000e+00 817.0
2 TraesCS7B01G335400 chr7B 89.754 244 23 2 2449 2690 73147194 73147437 7.290000e-81 311.0
3 TraesCS7B01G335400 chr5D 91.811 1612 67 19 527 2088 69346286 69344690 0.000000e+00 2185.0
4 TraesCS7B01G335400 chr5D 94.505 364 15 4 2094 2454 69344718 69344357 8.490000e-155 556.0
5 TraesCS7B01G335400 chr5D 86.637 449 38 12 642 1074 520990186 520989744 6.800000e-131 477.0
6 TraesCS7B01G335400 chr5D 90.262 267 22 2 2451 2713 69329640 69329374 2.000000e-91 346.0
7 TraesCS7B01G335400 chr5D 79.204 226 32 9 1785 2007 274786454 274786667 2.820000e-30 143.0
8 TraesCS7B01G335400 chr5A 94.772 1186 60 2 759 1943 546827991 546829175 0.000000e+00 1845.0
9 TraesCS7B01G335400 chr5A 84.783 276 17 4 528 779 546827687 546827961 1.250000e-63 254.0
10 TraesCS7B01G335400 chr7D 89.514 1421 93 35 1072 2454 531106817 531108219 0.000000e+00 1748.0
11 TraesCS7B01G335400 chr7D 93.867 799 40 5 1072 1870 12037270 12036481 0.000000e+00 1195.0
12 TraesCS7B01G335400 chr7D 86.059 581 48 17 526 1074 531106199 531106778 6.470000e-166 593.0
13 TraesCS7B01G335400 chr7D 86.576 514 51 12 27 527 547279421 547278913 3.950000e-153 551.0
14 TraesCS7B01G335400 chr7D 90.506 316 24 5 759 1074 12037618 12037309 1.940000e-111 412.0
15 TraesCS7B01G335400 chr7D 91.429 140 9 3 642 781 12037776 12037640 3.570000e-44 189.0
16 TraesCS7B01G335400 chr1D 88.755 1414 88 35 1072 2454 310818735 310820108 0.000000e+00 1664.0
17 TraesCS7B01G335400 chr1D 88.428 458 28 2 642 1074 310818239 310818696 1.850000e-146 529.0
18 TraesCS7B01G335400 chr1D 91.030 301 21 5 2159 2454 311348590 311348291 4.210000e-108 401.0
19 TraesCS7B01G335400 chr1D 89.583 240 23 1 2476 2713 310840915 310841154 1.220000e-78 303.0
20 TraesCS7B01G335400 chr3A 94.151 872 42 6 1080 1951 9964642 9965504 0.000000e+00 1319.0
21 TraesCS7B01G335400 chr3A 87.588 427 28 3 642 1043 9964220 9964646 3.160000e-129 472.0
22 TraesCS7B01G335400 chr6B 93.318 883 53 2 1072 1954 213572777 213571901 0.000000e+00 1299.0
23 TraesCS7B01G335400 chr6B 86.026 458 38 9 642 1074 213573272 213572816 4.090000e-128 468.0
24 TraesCS7B01G335400 chr6B 88.346 266 30 1 2449 2713 213570218 213569953 4.360000e-83 318.0
25 TraesCS7B01G335400 chr6B 87.072 263 29 4 2449 2710 720555446 720555704 2.640000e-75 292.0
26 TraesCS7B01G335400 chr3D 93.516 802 37 8 1072 1870 520185105 520184316 0.000000e+00 1179.0
27 TraesCS7B01G335400 chr3D 89.557 316 27 1 759 1074 520185453 520185144 1.960000e-106 396.0
28 TraesCS7B01G335400 chr3D 95.312 64 2 1 1891 1954 520184321 520184259 1.720000e-17 100.0
29 TraesCS7B01G335400 chr2B 91.881 776 49 7 1072 1841 26165808 26165041 0.000000e+00 1072.0
30 TraesCS7B01G335400 chr6A 93.220 708 42 2 1072 1779 588048949 588049650 0.000000e+00 1037.0
31 TraesCS7B01G335400 chr6A 84.422 597 44 22 527 1074 588048314 588048910 2.380000e-150 542.0
32 TraesCS7B01G335400 chr6A 91.822 269 22 0 2186 2454 588050042 588050310 2.550000e-100 375.0
33 TraesCS7B01G335400 chr6A 90.688 247 20 3 2467 2712 588055487 588055731 2.610000e-85 326.0
34 TraesCS7B01G335400 chr6A 89.908 218 17 4 1832 2049 588049650 588049862 2.660000e-70 276.0
35 TraesCS7B01G335400 chr3B 92.481 266 17 3 2449 2713 821047589 821047326 7.090000e-101 377.0
36 TraesCS7B01G335400 chr4B 89.591 269 22 4 2449 2711 643288335 643288067 1.200000e-88 337.0
37 TraesCS7B01G335400 chr4B 92.241 116 7 2 528 641 643292695 643292580 2.160000e-36 163.0
38 TraesCS7B01G335400 chr7A 86.716 271 24 5 19 283 628987656 628987920 9.500000e-75 291.0
39 TraesCS7B01G335400 chr7A 85.022 227 21 10 299 514 629012666 629012890 4.550000e-53 219.0
40 TraesCS7B01G335400 chr7A 87.719 114 8 5 291 404 628987973 628988080 7.880000e-26 128.0
41 TraesCS7B01G335400 chr7A 90.141 71 4 2 401 468 628988346 628988416 3.720000e-14 89.8
42 TraesCS7B01G335400 chr2A 85.818 275 22 13 2449 2710 98577888 98578158 2.660000e-70 276.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G335400 chr7B 590254546 590257258 2712 False 5011.000000 5011 100.0000 1 2713 1 chr7B.!!$F1 2712
1 TraesCS7B01G335400 chr7B 73143775 73147437 3662 False 564.000000 817 88.4005 528 2690 2 chr7B.!!$F2 2162
2 TraesCS7B01G335400 chr5D 69344357 69346286 1929 True 1370.500000 2185 93.1580 527 2454 2 chr5D.!!$R3 1927
3 TraesCS7B01G335400 chr5A 546827687 546829175 1488 False 1049.500000 1845 89.7775 528 1943 2 chr5A.!!$F1 1415
4 TraesCS7B01G335400 chr7D 531106199 531108219 2020 False 1170.500000 1748 87.7865 526 2454 2 chr7D.!!$F1 1928
5 TraesCS7B01G335400 chr7D 12036481 12037776 1295 True 598.666667 1195 91.9340 642 1870 3 chr7D.!!$R2 1228
6 TraesCS7B01G335400 chr7D 547278913 547279421 508 True 551.000000 551 86.5760 27 527 1 chr7D.!!$R1 500
7 TraesCS7B01G335400 chr1D 310818239 310820108 1869 False 1096.500000 1664 88.5915 642 2454 2 chr1D.!!$F2 1812
8 TraesCS7B01G335400 chr3A 9964220 9965504 1284 False 895.500000 1319 90.8695 642 1951 2 chr3A.!!$F1 1309
9 TraesCS7B01G335400 chr6B 213569953 213573272 3319 True 695.000000 1299 89.2300 642 2713 3 chr6B.!!$R1 2071
10 TraesCS7B01G335400 chr3D 520184259 520185453 1194 True 558.333333 1179 92.7950 759 1954 3 chr3D.!!$R1 1195
11 TraesCS7B01G335400 chr2B 26165041 26165808 767 True 1072.000000 1072 91.8810 1072 1841 1 chr2B.!!$R1 769
12 TraesCS7B01G335400 chr6A 588048314 588050310 1996 False 557.500000 1037 89.8430 527 2454 4 chr6A.!!$F2 1927

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
228 229 0.042188 CGCAACCGTCTGAAACACTG 60.042 55.0 0.0 0.0 0.0 3.66 F
231 232 0.107410 AACCGTCTGAAACACTGCCA 60.107 50.0 0.0 0.0 0.0 4.92 F
306 307 0.107508 TGCTGCTAGGTGCCAAGATC 60.108 55.0 0.0 0.0 42.0 2.75 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1455 1795 0.893270 TGCCATTCTTTGTCCACCCG 60.893 55.000 0.00 0.0 0.00 5.28 R
1475 1845 1.003573 CACCTTCCTAGGCCTCCCT 59.996 63.158 9.68 0.0 46.22 4.20 R
2000 3816 1.197721 GTGTGCTTGCGCTTATTCAGT 59.802 47.619 9.73 0.0 36.97 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.943909 GGCTACAGATTTAAGTACATGTAACT 57.056 34.615 7.25 4.74 0.00 2.24
59 60 2.674852 CGTGATTACAATCAGCTGCACT 59.325 45.455 9.47 0.00 45.38 4.40
61 62 4.259970 CGTGATTACAATCAGCTGCACTAC 60.260 45.833 9.47 0.00 45.38 2.73
62 63 4.631377 GTGATTACAATCAGCTGCACTACA 59.369 41.667 9.47 0.00 45.38 2.74
63 64 5.122239 GTGATTACAATCAGCTGCACTACAA 59.878 40.000 9.47 0.00 45.38 2.41
65 66 6.375174 TGATTACAATCAGCTGCACTACAAAT 59.625 34.615 9.47 2.75 40.32 2.32
67 68 7.680442 TTACAATCAGCTGCACTACAAATTA 57.320 32.000 9.47 0.00 0.00 1.40
68 69 6.764308 ACAATCAGCTGCACTACAAATTAT 57.236 33.333 9.47 0.00 0.00 1.28
69 70 7.864108 ACAATCAGCTGCACTACAAATTATA 57.136 32.000 9.47 0.00 0.00 0.98
70 71 7.923888 ACAATCAGCTGCACTACAAATTATAG 58.076 34.615 9.47 0.00 0.00 1.31
71 72 7.770433 ACAATCAGCTGCACTACAAATTATAGA 59.230 33.333 9.47 0.00 0.00 1.98
72 73 8.781196 CAATCAGCTGCACTACAAATTATAGAT 58.219 33.333 9.47 0.00 0.00 1.98
73 74 7.719778 TCAGCTGCACTACAAATTATAGATG 57.280 36.000 9.47 0.00 0.00 2.90
74 75 7.500141 TCAGCTGCACTACAAATTATAGATGA 58.500 34.615 9.47 0.00 0.00 2.92
75 76 8.152898 TCAGCTGCACTACAAATTATAGATGAT 58.847 33.333 9.47 0.00 0.00 2.45
76 77 8.441608 CAGCTGCACTACAAATTATAGATGATC 58.558 37.037 0.00 0.00 0.00 2.92
77 78 8.152898 AGCTGCACTACAAATTATAGATGATCA 58.847 33.333 1.02 0.00 0.00 2.92
78 79 8.441608 GCTGCACTACAAATTATAGATGATCAG 58.558 37.037 0.09 0.00 0.00 2.90
79 80 8.837788 TGCACTACAAATTATAGATGATCAGG 57.162 34.615 0.09 0.00 0.00 3.86
80 81 8.650490 TGCACTACAAATTATAGATGATCAGGA 58.350 33.333 0.09 0.00 0.00 3.86
81 82 9.494271 GCACTACAAATTATAGATGATCAGGAA 57.506 33.333 0.09 0.00 0.00 3.36
86 87 9.347240 ACAAATTATAGATGATCAGGAAAGGTG 57.653 33.333 0.09 0.00 0.00 4.00
87 88 7.992754 AATTATAGATGATCAGGAAAGGTGC 57.007 36.000 0.09 0.00 0.00 5.01
88 89 6.753913 TTATAGATGATCAGGAAAGGTGCT 57.246 37.500 0.09 0.00 0.00 4.40
89 90 7.855784 TTATAGATGATCAGGAAAGGTGCTA 57.144 36.000 0.09 0.00 0.00 3.49
90 91 6.753913 ATAGATGATCAGGAAAGGTGCTAA 57.246 37.500 0.09 0.00 0.00 3.09
91 92 5.643421 AGATGATCAGGAAAGGTGCTAAT 57.357 39.130 0.09 0.00 0.00 1.73
92 93 5.374921 AGATGATCAGGAAAGGTGCTAATG 58.625 41.667 0.09 0.00 0.00 1.90
93 94 4.574674 TGATCAGGAAAGGTGCTAATGT 57.425 40.909 0.00 0.00 0.00 2.71
94 95 4.264253 TGATCAGGAAAGGTGCTAATGTG 58.736 43.478 0.00 0.00 0.00 3.21
95 96 2.436417 TCAGGAAAGGTGCTAATGTGC 58.564 47.619 0.00 0.00 0.00 4.57
96 97 1.474077 CAGGAAAGGTGCTAATGTGCC 59.526 52.381 0.00 0.00 0.00 5.01
97 98 1.075374 AGGAAAGGTGCTAATGTGCCA 59.925 47.619 0.00 0.00 0.00 4.92
98 99 2.102578 GGAAAGGTGCTAATGTGCCAT 58.897 47.619 0.00 0.00 0.00 4.40
99 100 2.497273 GGAAAGGTGCTAATGTGCCATT 59.503 45.455 5.84 5.84 0.00 3.16
100 101 3.699038 GGAAAGGTGCTAATGTGCCATTA 59.301 43.478 7.23 7.23 0.00 1.90
101 102 4.202050 GGAAAGGTGCTAATGTGCCATTAG 60.202 45.833 21.35 21.35 35.34 1.73
102 103 3.652057 AGGTGCTAATGTGCCATTAGT 57.348 42.857 24.00 10.82 34.86 2.24
103 104 3.282021 AGGTGCTAATGTGCCATTAGTG 58.718 45.455 24.00 10.79 34.86 2.74
118 119 5.610398 CCATTAGTGGTATACAGATGCACA 58.390 41.667 5.01 0.00 40.83 4.57
119 120 6.233434 CCATTAGTGGTATACAGATGCACAT 58.767 40.000 5.01 0.00 40.83 3.21
120 121 6.148315 CCATTAGTGGTATACAGATGCACATG 59.852 42.308 5.01 0.00 40.83 3.21
121 122 3.470709 AGTGGTATACAGATGCACATGC 58.529 45.455 5.01 0.00 42.50 4.06
138 139 4.475051 CATGCAAATCATGGGGAAAGAA 57.525 40.909 0.00 0.00 46.81 2.52
139 140 4.834534 CATGCAAATCATGGGGAAAGAAA 58.165 39.130 0.00 0.00 46.81 2.52
140 141 4.540359 TGCAAATCATGGGGAAAGAAAG 57.460 40.909 0.00 0.00 0.00 2.62
141 142 4.158786 TGCAAATCATGGGGAAAGAAAGA 58.841 39.130 0.00 0.00 0.00 2.52
142 143 4.778958 TGCAAATCATGGGGAAAGAAAGAT 59.221 37.500 0.00 0.00 0.00 2.40
143 144 5.105228 TGCAAATCATGGGGAAAGAAAGATC 60.105 40.000 0.00 0.00 0.00 2.75
144 145 5.105228 GCAAATCATGGGGAAAGAAAGATCA 60.105 40.000 0.00 0.00 0.00 2.92
145 146 6.335777 CAAATCATGGGGAAAGAAAGATCAC 58.664 40.000 0.00 0.00 0.00 3.06
146 147 4.656100 TCATGGGGAAAGAAAGATCACA 57.344 40.909 0.00 0.00 0.00 3.58
147 148 4.592942 TCATGGGGAAAGAAAGATCACAG 58.407 43.478 0.00 0.00 0.00 3.66
148 149 4.289410 TCATGGGGAAAGAAAGATCACAGA 59.711 41.667 0.00 0.00 0.00 3.41
149 150 4.021102 TGGGGAAAGAAAGATCACAGAC 57.979 45.455 0.00 0.00 0.00 3.51
150 151 3.003480 GGGGAAAGAAAGATCACAGACG 58.997 50.000 0.00 0.00 0.00 4.18
151 152 2.416893 GGGAAAGAAAGATCACAGACGC 59.583 50.000 0.00 0.00 0.00 5.19
152 153 2.416893 GGAAAGAAAGATCACAGACGCC 59.583 50.000 0.00 0.00 0.00 5.68
153 154 2.839486 AAGAAAGATCACAGACGCCA 57.161 45.000 0.00 0.00 0.00 5.69
154 155 3.340814 AAGAAAGATCACAGACGCCAT 57.659 42.857 0.00 0.00 0.00 4.40
155 156 2.898705 AGAAAGATCACAGACGCCATC 58.101 47.619 0.00 0.00 0.00 3.51
156 157 2.234661 AGAAAGATCACAGACGCCATCA 59.765 45.455 0.00 0.00 0.00 3.07
157 158 2.306341 AAGATCACAGACGCCATCAG 57.694 50.000 0.00 0.00 0.00 2.90
158 159 1.189752 AGATCACAGACGCCATCAGT 58.810 50.000 0.00 0.00 0.00 3.41
159 160 1.134877 AGATCACAGACGCCATCAGTG 60.135 52.381 0.00 2.67 44.21 3.66
160 161 0.742281 ATCACAGACGCCATCAGTGC 60.742 55.000 3.93 0.00 42.93 4.40
161 162 1.668793 CACAGACGCCATCAGTGCA 60.669 57.895 0.00 0.00 37.93 4.57
162 163 1.375140 ACAGACGCCATCAGTGCAG 60.375 57.895 0.00 0.00 0.00 4.41
163 164 1.375140 CAGACGCCATCAGTGCAGT 60.375 57.895 0.00 0.00 0.00 4.40
164 165 0.108662 CAGACGCCATCAGTGCAGTA 60.109 55.000 0.00 0.00 0.00 2.74
165 166 0.826715 AGACGCCATCAGTGCAGTAT 59.173 50.000 0.00 0.00 0.00 2.12
166 167 1.208052 AGACGCCATCAGTGCAGTATT 59.792 47.619 0.00 0.00 0.00 1.89
167 168 2.430694 AGACGCCATCAGTGCAGTATTA 59.569 45.455 0.00 0.00 0.00 0.98
168 169 3.070159 AGACGCCATCAGTGCAGTATTAT 59.930 43.478 0.00 0.00 0.00 1.28
169 170 3.133691 ACGCCATCAGTGCAGTATTATG 58.866 45.455 0.00 0.00 0.00 1.90
170 171 3.181466 ACGCCATCAGTGCAGTATTATGA 60.181 43.478 10.69 0.00 0.00 2.15
171 172 3.999001 CGCCATCAGTGCAGTATTATGAT 59.001 43.478 10.69 0.13 0.00 2.45
172 173 4.092529 CGCCATCAGTGCAGTATTATGATC 59.907 45.833 10.69 0.00 0.00 2.92
173 174 4.999311 GCCATCAGTGCAGTATTATGATCA 59.001 41.667 0.00 0.00 0.00 2.92
174 175 5.471116 GCCATCAGTGCAGTATTATGATCAA 59.529 40.000 0.00 0.00 0.00 2.57
175 176 6.016860 GCCATCAGTGCAGTATTATGATCAAA 60.017 38.462 0.00 0.00 0.00 2.69
176 177 7.309012 GCCATCAGTGCAGTATTATGATCAAAT 60.309 37.037 0.00 4.08 0.00 2.32
177 178 8.573885 CCATCAGTGCAGTATTATGATCAAATT 58.426 33.333 0.00 0.00 0.00 1.82
181 182 9.836076 CAGTGCAGTATTATGATCAAATTATGG 57.164 33.333 0.00 0.00 0.00 2.74
182 183 9.017509 AGTGCAGTATTATGATCAAATTATGGG 57.982 33.333 0.00 0.00 0.00 4.00
183 184 9.013229 GTGCAGTATTATGATCAAATTATGGGA 57.987 33.333 0.00 0.00 0.00 4.37
184 185 9.585369 TGCAGTATTATGATCAAATTATGGGAA 57.415 29.630 0.00 0.00 0.00 3.97
192 193 7.903995 TGATCAAATTATGGGAAAAGTTTGC 57.096 32.000 0.00 0.00 0.00 3.68
193 194 7.448420 TGATCAAATTATGGGAAAAGTTTGCA 58.552 30.769 0.00 0.00 0.00 4.08
194 195 7.603404 TGATCAAATTATGGGAAAAGTTTGCAG 59.397 33.333 0.00 0.00 0.00 4.41
195 196 5.700373 TCAAATTATGGGAAAAGTTTGCAGC 59.300 36.000 0.00 0.00 0.00 5.25
196 197 5.488262 AATTATGGGAAAAGTTTGCAGCT 57.512 34.783 0.00 0.00 0.00 4.24
197 198 6.603940 AATTATGGGAAAAGTTTGCAGCTA 57.396 33.333 0.00 0.00 0.00 3.32
198 199 5.643379 TTATGGGAAAAGTTTGCAGCTAG 57.357 39.130 0.00 0.00 0.00 3.42
199 200 1.613437 TGGGAAAAGTTTGCAGCTAGC 59.387 47.619 6.62 6.62 45.96 3.42
208 209 2.772189 GCAGCTAGCGTCACGTTG 59.228 61.111 9.55 0.93 0.00 4.10
209 210 2.772189 CAGCTAGCGTCACGTTGC 59.228 61.111 9.55 0.71 0.00 4.17
210 211 2.805353 AGCTAGCGTCACGTTGCG 60.805 61.111 9.55 4.37 35.87 4.85
216 217 4.986531 CGTCACGTTGCGCAACCG 62.987 66.667 39.25 34.05 38.03 4.44
217 218 3.932313 GTCACGTTGCGCAACCGT 61.932 61.111 39.25 34.61 38.03 4.83
218 219 3.632107 TCACGTTGCGCAACCGTC 61.632 61.111 39.25 20.94 38.03 4.79
219 220 3.636043 CACGTTGCGCAACCGTCT 61.636 61.111 39.25 21.14 38.03 4.18
220 221 3.636043 ACGTTGCGCAACCGTCTG 61.636 61.111 39.25 28.98 38.03 3.51
221 222 3.334751 CGTTGCGCAACCGTCTGA 61.335 61.111 39.25 8.99 38.03 3.27
222 223 2.876879 CGTTGCGCAACCGTCTGAA 61.877 57.895 39.25 8.19 38.03 3.02
223 224 1.353804 GTTGCGCAACCGTCTGAAA 59.646 52.632 37.19 4.28 35.36 2.69
224 225 0.928451 GTTGCGCAACCGTCTGAAAC 60.928 55.000 37.19 13.66 35.36 2.78
225 226 1.369839 TTGCGCAACCGTCTGAAACA 61.370 50.000 21.02 0.00 36.67 2.83
226 227 1.368850 GCGCAACCGTCTGAAACAC 60.369 57.895 0.30 0.00 36.67 3.32
227 228 1.772063 GCGCAACCGTCTGAAACACT 61.772 55.000 0.30 0.00 36.67 3.55
228 229 0.042188 CGCAACCGTCTGAAACACTG 60.042 55.000 0.00 0.00 0.00 3.66
229 230 0.317020 GCAACCGTCTGAAACACTGC 60.317 55.000 0.00 0.00 0.00 4.40
230 231 0.307760 CAACCGTCTGAAACACTGCC 59.692 55.000 0.00 0.00 0.00 4.85
231 232 0.107410 AACCGTCTGAAACACTGCCA 60.107 50.000 0.00 0.00 0.00 4.92
232 233 0.532862 ACCGTCTGAAACACTGCCAG 60.533 55.000 0.00 0.00 0.00 4.85
233 234 0.249868 CCGTCTGAAACACTGCCAGA 60.250 55.000 0.00 0.00 34.87 3.86
234 235 1.581934 CGTCTGAAACACTGCCAGAA 58.418 50.000 0.00 0.00 38.49 3.02
235 236 1.939934 CGTCTGAAACACTGCCAGAAA 59.060 47.619 0.00 0.00 38.49 2.52
236 237 2.549754 CGTCTGAAACACTGCCAGAAAT 59.450 45.455 0.00 0.00 38.49 2.17
237 238 3.607775 CGTCTGAAACACTGCCAGAAATG 60.608 47.826 0.00 0.00 38.49 2.32
238 239 3.565482 GTCTGAAACACTGCCAGAAATGA 59.435 43.478 0.00 0.00 38.49 2.57
239 240 3.565482 TCTGAAACACTGCCAGAAATGAC 59.435 43.478 0.00 0.00 34.38 3.06
240 241 2.622942 TGAAACACTGCCAGAAATGACC 59.377 45.455 0.00 0.00 0.00 4.02
241 242 2.363306 AACACTGCCAGAAATGACCA 57.637 45.000 0.00 0.00 0.00 4.02
242 243 2.363306 ACACTGCCAGAAATGACCAA 57.637 45.000 0.00 0.00 0.00 3.67
243 244 1.956477 ACACTGCCAGAAATGACCAAC 59.044 47.619 0.00 0.00 0.00 3.77
244 245 1.955778 CACTGCCAGAAATGACCAACA 59.044 47.619 0.00 0.00 0.00 3.33
245 246 1.956477 ACTGCCAGAAATGACCAACAC 59.044 47.619 0.00 0.00 0.00 3.32
246 247 1.955778 CTGCCAGAAATGACCAACACA 59.044 47.619 0.00 0.00 0.00 3.72
247 248 1.680735 TGCCAGAAATGACCAACACAC 59.319 47.619 0.00 0.00 0.00 3.82
248 249 1.680735 GCCAGAAATGACCAACACACA 59.319 47.619 0.00 0.00 0.00 3.72
249 250 2.100584 GCCAGAAATGACCAACACACAA 59.899 45.455 0.00 0.00 0.00 3.33
250 251 3.430098 GCCAGAAATGACCAACACACAAA 60.430 43.478 0.00 0.00 0.00 2.83
251 252 4.362279 CCAGAAATGACCAACACACAAAG 58.638 43.478 0.00 0.00 0.00 2.77
252 253 4.097741 CCAGAAATGACCAACACACAAAGA 59.902 41.667 0.00 0.00 0.00 2.52
253 254 5.036737 CAGAAATGACCAACACACAAAGAC 58.963 41.667 0.00 0.00 0.00 3.01
254 255 3.691049 AATGACCAACACACAAAGACG 57.309 42.857 0.00 0.00 0.00 4.18
255 256 1.374560 TGACCAACACACAAAGACGG 58.625 50.000 0.00 0.00 0.00 4.79
256 257 1.066071 TGACCAACACACAAAGACGGA 60.066 47.619 0.00 0.00 0.00 4.69
257 258 2.011222 GACCAACACACAAAGACGGAA 58.989 47.619 0.00 0.00 0.00 4.30
258 259 2.014128 ACCAACACACAAAGACGGAAG 58.986 47.619 0.00 0.00 0.00 3.46
259 260 1.268539 CCAACACACAAAGACGGAAGC 60.269 52.381 0.00 0.00 0.00 3.86
260 261 0.655733 AACACACAAAGACGGAAGCG 59.344 50.000 0.00 0.00 0.00 4.68
261 262 0.179094 ACACACAAAGACGGAAGCGA 60.179 50.000 0.00 0.00 0.00 4.93
262 263 0.934496 CACACAAAGACGGAAGCGAA 59.066 50.000 0.00 0.00 0.00 4.70
263 264 1.329292 CACACAAAGACGGAAGCGAAA 59.671 47.619 0.00 0.00 0.00 3.46
264 265 1.329599 ACACAAAGACGGAAGCGAAAC 59.670 47.619 0.00 0.00 0.00 2.78
265 266 0.580104 ACAAAGACGGAAGCGAAACG 59.420 50.000 0.00 0.00 0.00 3.60
266 267 0.580104 CAAAGACGGAAGCGAAACGT 59.420 50.000 0.00 0.00 44.35 3.99
267 268 1.788308 CAAAGACGGAAGCGAAACGTA 59.212 47.619 0.00 0.00 41.40 3.57
268 269 1.694639 AAGACGGAAGCGAAACGTAG 58.305 50.000 0.00 0.00 41.40 3.51
269 270 0.877071 AGACGGAAGCGAAACGTAGA 59.123 50.000 0.00 0.00 41.40 2.59
270 271 1.135746 AGACGGAAGCGAAACGTAGAG 60.136 52.381 0.00 0.00 41.40 2.43
271 272 0.877071 ACGGAAGCGAAACGTAGAGA 59.123 50.000 0.00 0.00 39.30 3.10
272 273 1.471684 ACGGAAGCGAAACGTAGAGAT 59.528 47.619 0.00 0.00 39.30 2.75
273 274 2.110226 CGGAAGCGAAACGTAGAGATC 58.890 52.381 0.00 0.00 0.00 2.75
274 275 2.477357 CGGAAGCGAAACGTAGAGATCA 60.477 50.000 0.00 0.00 0.00 2.92
275 276 3.109619 GGAAGCGAAACGTAGAGATCAG 58.890 50.000 0.00 0.00 0.00 2.90
276 277 2.853731 AGCGAAACGTAGAGATCAGG 57.146 50.000 0.00 0.00 0.00 3.86
277 278 1.201343 GCGAAACGTAGAGATCAGGC 58.799 55.000 0.00 0.00 0.00 4.85
278 279 1.467875 CGAAACGTAGAGATCAGGCG 58.532 55.000 0.00 0.00 0.00 5.52
279 280 1.841450 GAAACGTAGAGATCAGGCGG 58.159 55.000 0.00 0.00 0.00 6.13
280 281 1.404391 GAAACGTAGAGATCAGGCGGA 59.596 52.381 0.00 0.00 0.00 5.54
281 282 0.739561 AACGTAGAGATCAGGCGGAC 59.260 55.000 0.00 0.00 0.00 4.79
282 283 1.102222 ACGTAGAGATCAGGCGGACC 61.102 60.000 0.00 0.00 0.00 4.46
283 284 1.655329 GTAGAGATCAGGCGGACCG 59.345 63.158 10.29 10.29 42.76 4.79
284 285 1.102222 GTAGAGATCAGGCGGACCGT 61.102 60.000 16.73 0.00 42.76 4.83
285 286 1.101635 TAGAGATCAGGCGGACCGTG 61.102 60.000 16.73 6.97 42.76 4.94
286 287 2.680352 AGATCAGGCGGACCGTGT 60.680 61.111 16.73 0.00 42.76 4.49
287 288 2.227089 GAGATCAGGCGGACCGTGTT 62.227 60.000 16.73 1.57 42.76 3.32
288 289 2.047274 ATCAGGCGGACCGTGTTG 60.047 61.111 16.73 11.43 42.76 3.33
289 290 4.980805 TCAGGCGGACCGTGTTGC 62.981 66.667 16.73 0.00 42.76 4.17
290 291 4.988598 CAGGCGGACCGTGTTGCT 62.989 66.667 16.73 0.00 42.76 3.91
291 292 4.988598 AGGCGGACCGTGTTGCTG 62.989 66.667 16.73 0.00 42.76 4.41
294 295 2.048597 CGGACCGTGTTGCTGCTA 60.049 61.111 5.48 0.00 0.00 3.49
295 296 2.094659 CGGACCGTGTTGCTGCTAG 61.095 63.158 5.48 0.00 0.00 3.42
296 297 1.741770 GGACCGTGTTGCTGCTAGG 60.742 63.158 0.00 0.00 0.00 3.02
297 298 1.004918 GACCGTGTTGCTGCTAGGT 60.005 57.895 0.00 3.08 34.27 3.08
298 299 1.291877 GACCGTGTTGCTGCTAGGTG 61.292 60.000 0.00 0.00 31.35 4.00
299 300 2.680913 CCGTGTTGCTGCTAGGTGC 61.681 63.158 0.00 0.00 43.25 5.01
300 301 2.680913 CGTGTTGCTGCTAGGTGCC 61.681 63.158 0.00 0.00 42.00 5.01
301 302 1.600636 GTGTTGCTGCTAGGTGCCA 60.601 57.895 0.00 0.00 42.00 4.92
302 303 1.150308 TGTTGCTGCTAGGTGCCAA 59.850 52.632 0.00 0.00 42.00 4.52
303 304 0.890542 TGTTGCTGCTAGGTGCCAAG 60.891 55.000 0.00 0.00 42.00 3.61
304 305 0.606401 GTTGCTGCTAGGTGCCAAGA 60.606 55.000 0.00 0.00 42.00 3.02
305 306 0.329261 TTGCTGCTAGGTGCCAAGAT 59.671 50.000 0.00 0.00 42.00 2.40
306 307 0.107508 TGCTGCTAGGTGCCAAGATC 60.108 55.000 0.00 0.00 42.00 2.75
307 308 0.179936 GCTGCTAGGTGCCAAGATCT 59.820 55.000 0.00 0.00 42.00 2.75
308 309 1.414181 GCTGCTAGGTGCCAAGATCTA 59.586 52.381 0.00 0.00 42.00 1.98
309 310 2.804933 GCTGCTAGGTGCCAAGATCTAC 60.805 54.545 0.00 0.00 42.00 2.59
310 311 2.697751 CTGCTAGGTGCCAAGATCTACT 59.302 50.000 0.00 0.00 42.00 2.57
311 312 2.695666 TGCTAGGTGCCAAGATCTACTC 59.304 50.000 0.00 0.00 42.00 2.59
312 313 2.695666 GCTAGGTGCCAAGATCTACTCA 59.304 50.000 0.00 0.00 35.15 3.41
313 314 3.491792 GCTAGGTGCCAAGATCTACTCAC 60.492 52.174 0.00 4.21 35.15 3.51
314 315 1.834263 AGGTGCCAAGATCTACTCACC 59.166 52.381 22.63 22.63 39.69 4.02
315 316 1.555075 GGTGCCAAGATCTACTCACCA 59.445 52.381 24.06 5.30 39.40 4.17
316 317 2.622436 GTGCCAAGATCTACTCACCAC 58.378 52.381 0.00 0.00 0.00 4.16
317 318 2.028112 GTGCCAAGATCTACTCACCACA 60.028 50.000 0.00 0.00 0.00 4.17
318 319 2.637382 TGCCAAGATCTACTCACCACAA 59.363 45.455 0.00 0.00 0.00 3.33
319 320 3.072330 TGCCAAGATCTACTCACCACAAA 59.928 43.478 0.00 0.00 0.00 2.83
320 321 4.072131 GCCAAGATCTACTCACCACAAAA 58.928 43.478 0.00 0.00 0.00 2.44
321 322 4.154918 GCCAAGATCTACTCACCACAAAAG 59.845 45.833 0.00 0.00 0.00 2.27
322 323 4.154918 CCAAGATCTACTCACCACAAAAGC 59.845 45.833 0.00 0.00 0.00 3.51
323 324 3.944087 AGATCTACTCACCACAAAAGCC 58.056 45.455 0.00 0.00 0.00 4.35
324 325 2.163818 TCTACTCACCACAAAAGCCG 57.836 50.000 0.00 0.00 0.00 5.52
325 326 1.414919 TCTACTCACCACAAAAGCCGT 59.585 47.619 0.00 0.00 0.00 5.68
326 327 1.798813 CTACTCACCACAAAAGCCGTC 59.201 52.381 0.00 0.00 0.00 4.79
327 328 0.818040 ACTCACCACAAAAGCCGTCC 60.818 55.000 0.00 0.00 0.00 4.79
328 329 1.515521 CTCACCACAAAAGCCGTCCC 61.516 60.000 0.00 0.00 0.00 4.46
329 330 1.528309 CACCACAAAAGCCGTCCCT 60.528 57.895 0.00 0.00 0.00 4.20
330 331 1.106944 CACCACAAAAGCCGTCCCTT 61.107 55.000 0.00 0.00 0.00 3.95
331 332 0.822121 ACCACAAAAGCCGTCCCTTC 60.822 55.000 0.00 0.00 0.00 3.46
332 333 0.821711 CCACAAAAGCCGTCCCTTCA 60.822 55.000 0.00 0.00 0.00 3.02
333 334 1.247567 CACAAAAGCCGTCCCTTCAT 58.752 50.000 0.00 0.00 0.00 2.57
334 335 1.200020 CACAAAAGCCGTCCCTTCATC 59.800 52.381 0.00 0.00 0.00 2.92
335 336 0.811281 CAAAAGCCGTCCCTTCATCC 59.189 55.000 0.00 0.00 0.00 3.51
336 337 0.404040 AAAAGCCGTCCCTTCATCCA 59.596 50.000 0.00 0.00 0.00 3.41
337 338 0.625849 AAAGCCGTCCCTTCATCCAT 59.374 50.000 0.00 0.00 0.00 3.41
338 339 0.181350 AAGCCGTCCCTTCATCCATC 59.819 55.000 0.00 0.00 0.00 3.51
339 340 1.227973 GCCGTCCCTTCATCCATCC 60.228 63.158 0.00 0.00 0.00 3.51
340 341 1.983119 GCCGTCCCTTCATCCATCCA 61.983 60.000 0.00 0.00 0.00 3.41
341 342 0.767375 CCGTCCCTTCATCCATCCAT 59.233 55.000 0.00 0.00 0.00 3.41
342 343 1.544093 CCGTCCCTTCATCCATCCATG 60.544 57.143 0.00 0.00 0.00 3.66
343 344 1.417517 CGTCCCTTCATCCATCCATGA 59.582 52.381 0.00 0.00 0.00 3.07
344 345 2.808202 CGTCCCTTCATCCATCCATGAC 60.808 54.545 0.00 0.00 32.28 3.06
345 346 1.776667 TCCCTTCATCCATCCATGACC 59.223 52.381 0.00 0.00 32.28 4.02
346 347 1.202976 CCCTTCATCCATCCATGACCC 60.203 57.143 0.00 0.00 32.28 4.46
347 348 1.496001 CCTTCATCCATCCATGACCCA 59.504 52.381 0.00 0.00 32.28 4.51
348 349 2.488528 CCTTCATCCATCCATGACCCAG 60.489 54.545 0.00 0.00 32.28 4.45
349 350 2.195153 TCATCCATCCATGACCCAGA 57.805 50.000 0.00 0.00 0.00 3.86
350 351 2.490961 TCATCCATCCATGACCCAGAA 58.509 47.619 0.00 0.00 0.00 3.02
351 352 2.851821 TCATCCATCCATGACCCAGAAA 59.148 45.455 0.00 0.00 0.00 2.52
352 353 3.464456 TCATCCATCCATGACCCAGAAAT 59.536 43.478 0.00 0.00 0.00 2.17
353 354 4.664536 TCATCCATCCATGACCCAGAAATA 59.335 41.667 0.00 0.00 0.00 1.40
354 355 5.134169 TCATCCATCCATGACCCAGAAATAA 59.866 40.000 0.00 0.00 0.00 1.40
355 356 5.464588 TCCATCCATGACCCAGAAATAAA 57.535 39.130 0.00 0.00 0.00 1.40
356 357 6.029492 TCCATCCATGACCCAGAAATAAAT 57.971 37.500 0.00 0.00 0.00 1.40
357 358 7.160457 TCCATCCATGACCCAGAAATAAATA 57.840 36.000 0.00 0.00 0.00 1.40
358 359 7.004086 TCCATCCATGACCCAGAAATAAATAC 58.996 38.462 0.00 0.00 0.00 1.89
359 360 6.777091 CCATCCATGACCCAGAAATAAATACA 59.223 38.462 0.00 0.00 0.00 2.29
360 361 7.452501 CCATCCATGACCCAGAAATAAATACAT 59.547 37.037 0.00 0.00 0.00 2.29
361 362 7.822161 TCCATGACCCAGAAATAAATACATG 57.178 36.000 0.00 0.00 34.41 3.21
362 363 6.265196 TCCATGACCCAGAAATAAATACATGC 59.735 38.462 0.00 0.00 33.65 4.06
363 364 5.749596 TGACCCAGAAATAAATACATGCG 57.250 39.130 0.00 0.00 0.00 4.73
364 365 5.189928 TGACCCAGAAATAAATACATGCGT 58.810 37.500 0.00 0.00 0.00 5.24
365 366 5.295787 TGACCCAGAAATAAATACATGCGTC 59.704 40.000 0.00 0.00 0.00 5.19
366 367 4.578928 ACCCAGAAATAAATACATGCGTCC 59.421 41.667 0.00 0.00 0.00 4.79
367 368 4.578516 CCCAGAAATAAATACATGCGTCCA 59.421 41.667 0.00 0.00 0.00 4.02
368 369 5.505654 CCCAGAAATAAATACATGCGTCCAC 60.506 44.000 0.00 0.00 0.00 4.02
369 370 5.065859 CCAGAAATAAATACATGCGTCCACA 59.934 40.000 0.00 0.00 0.00 4.17
370 371 6.194463 CAGAAATAAATACATGCGTCCACAG 58.806 40.000 0.00 0.00 0.00 3.66
371 372 5.880332 AGAAATAAATACATGCGTCCACAGT 59.120 36.000 0.00 0.00 0.00 3.55
372 373 5.484173 AATAAATACATGCGTCCACAGTG 57.516 39.130 0.00 0.00 0.00 3.66
373 374 2.760634 AATACATGCGTCCACAGTGA 57.239 45.000 0.62 0.00 0.00 3.41
374 375 2.299993 ATACATGCGTCCACAGTGAG 57.700 50.000 0.62 0.00 0.00 3.51
375 376 0.389817 TACATGCGTCCACAGTGAGC 60.390 55.000 0.62 5.43 0.00 4.26
376 377 1.375140 CATGCGTCCACAGTGAGCT 60.375 57.895 0.62 0.00 0.00 4.09
377 378 0.108662 CATGCGTCCACAGTGAGCTA 60.109 55.000 0.62 0.00 0.00 3.32
378 379 0.174389 ATGCGTCCACAGTGAGCTAG 59.826 55.000 0.62 0.00 0.00 3.42
379 380 1.807573 GCGTCCACAGTGAGCTAGC 60.808 63.158 6.62 6.62 0.00 3.42
380 381 1.153745 CGTCCACAGTGAGCTAGCC 60.154 63.158 12.13 3.49 0.00 3.93
381 382 1.877576 CGTCCACAGTGAGCTAGCCA 61.878 60.000 12.13 6.44 0.00 4.75
382 383 0.539051 GTCCACAGTGAGCTAGCCAT 59.461 55.000 12.13 0.00 0.00 4.40
383 384 0.826715 TCCACAGTGAGCTAGCCATC 59.173 55.000 12.13 3.81 0.00 3.51
384 385 0.529337 CCACAGTGAGCTAGCCATCG 60.529 60.000 12.13 7.10 0.00 3.84
385 386 1.142748 ACAGTGAGCTAGCCATCGC 59.857 57.895 12.13 10.27 0.00 4.58
386 387 1.593750 CAGTGAGCTAGCCATCGCC 60.594 63.158 12.13 0.00 34.57 5.54
387 388 2.280457 GTGAGCTAGCCATCGCCC 60.280 66.667 12.13 0.00 34.57 6.13
388 389 3.550431 TGAGCTAGCCATCGCCCC 61.550 66.667 12.13 0.00 34.57 5.80
389 390 4.321966 GAGCTAGCCATCGCCCCC 62.322 72.222 12.13 0.00 34.57 5.40
391 392 4.937431 GCTAGCCATCGCCCCCAC 62.937 72.222 2.29 0.00 34.57 4.61
392 393 4.256180 CTAGCCATCGCCCCCACC 62.256 72.222 0.00 0.00 34.57 4.61
402 403 2.611486 CCCCCACCCCGGAGTAAA 60.611 66.667 0.73 0.00 36.56 2.01
403 404 2.676265 CCCCCACCCCGGAGTAAAG 61.676 68.421 0.73 0.00 36.56 1.85
404 405 2.271173 CCCACCCCGGAGTAAAGC 59.729 66.667 0.73 0.00 36.56 3.51
405 406 2.271173 CCACCCCGGAGTAAAGCC 59.729 66.667 0.73 0.00 36.56 4.35
412 413 2.513897 GGAGTAAAGCCGCGCCAT 60.514 61.111 0.00 0.00 0.00 4.40
413 414 2.709475 GAGTAAAGCCGCGCCATG 59.291 61.111 0.00 0.00 0.00 3.66
414 415 3.454960 GAGTAAAGCCGCGCCATGC 62.455 63.158 0.00 1.75 41.47 4.06
415 416 3.809775 GTAAAGCCGCGCCATGCA 61.810 61.111 12.88 0.00 46.97 3.96
416 417 2.828095 TAAAGCCGCGCCATGCAT 60.828 55.556 12.88 0.00 46.97 3.96
417 418 1.524849 TAAAGCCGCGCCATGCATA 60.525 52.632 12.88 3.99 46.97 3.14
418 419 1.506309 TAAAGCCGCGCCATGCATAG 61.506 55.000 12.88 0.00 46.97 2.23
421 422 4.021631 CCGCGCCATGCATAGCTG 62.022 66.667 15.17 9.58 46.97 4.24
422 423 4.021631 CGCGCCATGCATAGCTGG 62.022 66.667 15.17 7.63 46.97 4.85
423 424 2.903855 GCGCCATGCATAGCTGGT 60.904 61.111 15.17 0.00 45.45 4.00
424 425 3.028130 CGCCATGCATAGCTGGTG 58.972 61.111 15.17 9.28 36.76 4.17
425 426 2.549198 CGCCATGCATAGCTGGTGG 61.549 63.158 15.17 5.72 38.98 4.61
426 427 1.454479 GCCATGCATAGCTGGTGGT 60.454 57.895 10.06 0.00 34.86 4.16
427 428 1.039233 GCCATGCATAGCTGGTGGTT 61.039 55.000 10.06 0.00 34.86 3.67
428 429 1.477553 CCATGCATAGCTGGTGGTTT 58.522 50.000 0.00 0.00 0.00 3.27
429 430 1.826720 CCATGCATAGCTGGTGGTTTT 59.173 47.619 0.00 0.00 0.00 2.43
430 431 2.417651 CCATGCATAGCTGGTGGTTTTG 60.418 50.000 0.00 0.00 0.00 2.44
431 432 0.602562 TGCATAGCTGGTGGTTTTGC 59.397 50.000 0.00 0.00 34.43 3.68
432 433 0.890683 GCATAGCTGGTGGTTTTGCT 59.109 50.000 0.00 0.00 39.30 3.91
433 434 1.403249 GCATAGCTGGTGGTTTTGCTG 60.403 52.381 0.00 0.00 37.02 4.41
434 435 1.888512 CATAGCTGGTGGTTTTGCTGT 59.111 47.619 0.00 0.00 37.02 4.40
435 436 2.065899 TAGCTGGTGGTTTTGCTGTT 57.934 45.000 0.00 0.00 37.02 3.16
436 437 1.194218 AGCTGGTGGTTTTGCTGTTT 58.806 45.000 0.00 0.00 34.19 2.83
437 438 1.136891 AGCTGGTGGTTTTGCTGTTTC 59.863 47.619 0.00 0.00 34.19 2.78
438 439 1.136891 GCTGGTGGTTTTGCTGTTTCT 59.863 47.619 0.00 0.00 0.00 2.52
439 440 2.813061 CTGGTGGTTTTGCTGTTTCTG 58.187 47.619 0.00 0.00 0.00 3.02
440 441 1.134848 TGGTGGTTTTGCTGTTTCTGC 60.135 47.619 0.00 0.00 0.00 4.26
441 442 1.134848 GGTGGTTTTGCTGTTTCTGCA 60.135 47.619 0.00 0.00 36.58 4.41
442 443 1.926510 GTGGTTTTGCTGTTTCTGCAC 59.073 47.619 1.14 0.00 37.99 4.57
443 444 1.134848 TGGTTTTGCTGTTTCTGCACC 60.135 47.619 1.14 1.54 37.99 5.01
444 445 1.199624 GTTTTGCTGTTTCTGCACCG 58.800 50.000 1.14 0.00 37.99 4.94
445 446 0.527385 TTTTGCTGTTTCTGCACCGC 60.527 50.000 1.14 0.00 37.99 5.68
446 447 1.383456 TTTGCTGTTTCTGCACCGCT 61.383 50.000 1.14 0.00 37.99 5.52
447 448 1.785041 TTGCTGTTTCTGCACCGCTC 61.785 55.000 1.14 0.00 37.99 5.03
448 449 2.970974 GCTGTTTCTGCACCGCTCC 61.971 63.158 0.00 0.00 0.00 4.70
449 450 1.597854 CTGTTTCTGCACCGCTCCA 60.598 57.895 0.00 0.00 0.00 3.86
450 451 1.845809 CTGTTTCTGCACCGCTCCAC 61.846 60.000 0.00 0.00 0.00 4.02
451 452 1.598130 GTTTCTGCACCGCTCCACT 60.598 57.895 0.00 0.00 0.00 4.00
452 453 1.301716 TTTCTGCACCGCTCCACTC 60.302 57.895 0.00 0.00 0.00 3.51
453 454 2.038814 TTTCTGCACCGCTCCACTCA 62.039 55.000 0.00 0.00 0.00 3.41
454 455 1.830587 TTCTGCACCGCTCCACTCAT 61.831 55.000 0.00 0.00 0.00 2.90
455 456 1.812922 CTGCACCGCTCCACTCATC 60.813 63.158 0.00 0.00 0.00 2.92
456 457 2.512515 GCACCGCTCCACTCATCC 60.513 66.667 0.00 0.00 0.00 3.51
457 458 2.187946 CACCGCTCCACTCATCCC 59.812 66.667 0.00 0.00 0.00 3.85
458 459 2.284625 ACCGCTCCACTCATCCCA 60.285 61.111 0.00 0.00 0.00 4.37
459 460 2.187946 CCGCTCCACTCATCCCAC 59.812 66.667 0.00 0.00 0.00 4.61
460 461 2.187946 CGCTCCACTCATCCCACC 59.812 66.667 0.00 0.00 0.00 4.61
461 462 2.362369 CGCTCCACTCATCCCACCT 61.362 63.158 0.00 0.00 0.00 4.00
462 463 1.222936 GCTCCACTCATCCCACCTG 59.777 63.158 0.00 0.00 0.00 4.00
463 464 1.222936 CTCCACTCATCCCACCTGC 59.777 63.158 0.00 0.00 0.00 4.85
464 465 2.262774 CTCCACTCATCCCACCTGCC 62.263 65.000 0.00 0.00 0.00 4.85
465 466 2.605607 CCACTCATCCCACCTGCCA 61.606 63.158 0.00 0.00 0.00 4.92
466 467 1.377725 CACTCATCCCACCTGCCAC 60.378 63.158 0.00 0.00 0.00 5.01
467 468 2.273449 CTCATCCCACCTGCCACC 59.727 66.667 0.00 0.00 0.00 4.61
468 469 3.687321 CTCATCCCACCTGCCACCG 62.687 68.421 0.00 0.00 0.00 4.94
469 470 3.716195 CATCCCACCTGCCACCGA 61.716 66.667 0.00 0.00 0.00 4.69
470 471 2.933287 ATCCCACCTGCCACCGAA 60.933 61.111 0.00 0.00 0.00 4.30
471 472 2.308722 ATCCCACCTGCCACCGAAT 61.309 57.895 0.00 0.00 0.00 3.34
472 473 1.863155 ATCCCACCTGCCACCGAATT 61.863 55.000 0.00 0.00 0.00 2.17
473 474 2.342650 CCCACCTGCCACCGAATTG 61.343 63.158 0.00 0.00 0.00 2.32
474 475 1.303236 CCACCTGCCACCGAATTGA 60.303 57.895 0.00 0.00 0.00 2.57
475 476 0.893270 CCACCTGCCACCGAATTGAA 60.893 55.000 0.00 0.00 0.00 2.69
476 477 1.176527 CACCTGCCACCGAATTGAAT 58.823 50.000 0.00 0.00 0.00 2.57
477 478 1.135315 CACCTGCCACCGAATTGAATG 60.135 52.381 0.00 0.00 0.00 2.67
478 479 1.271871 ACCTGCCACCGAATTGAATGA 60.272 47.619 0.00 0.00 0.00 2.57
479 480 1.818060 CCTGCCACCGAATTGAATGAA 59.182 47.619 0.00 0.00 0.00 2.57
480 481 2.230992 CCTGCCACCGAATTGAATGAAA 59.769 45.455 0.00 0.00 0.00 2.69
481 482 3.305950 CCTGCCACCGAATTGAATGAAAA 60.306 43.478 0.00 0.00 0.00 2.29
482 483 4.497300 CTGCCACCGAATTGAATGAAAAT 58.503 39.130 0.00 0.00 0.00 1.82
483 484 5.394005 CCTGCCACCGAATTGAATGAAAATA 60.394 40.000 0.00 0.00 0.00 1.40
484 485 6.219417 TGCCACCGAATTGAATGAAAATAT 57.781 33.333 0.00 0.00 0.00 1.28
485 486 6.638610 TGCCACCGAATTGAATGAAAATATT 58.361 32.000 0.00 0.00 0.00 1.28
486 487 6.756074 TGCCACCGAATTGAATGAAAATATTC 59.244 34.615 0.00 0.00 37.53 1.75
487 488 6.200854 GCCACCGAATTGAATGAAAATATTCC 59.799 38.462 0.00 0.00 36.46 3.01
488 489 7.491682 CCACCGAATTGAATGAAAATATTCCT 58.508 34.615 0.00 0.00 36.46 3.36
489 490 7.649306 CCACCGAATTGAATGAAAATATTCCTC 59.351 37.037 0.00 0.00 36.46 3.71
490 491 7.649306 CACCGAATTGAATGAAAATATTCCTCC 59.351 37.037 0.00 0.00 36.46 4.30
491 492 7.147976 CCGAATTGAATGAAAATATTCCTCCC 58.852 38.462 0.00 0.00 36.46 4.30
492 493 6.857964 CGAATTGAATGAAAATATTCCTCCCG 59.142 38.462 0.00 0.00 36.46 5.14
493 494 6.655078 ATTGAATGAAAATATTCCTCCCGG 57.345 37.500 0.00 0.00 36.46 5.73
494 495 3.888930 TGAATGAAAATATTCCTCCCGGC 59.111 43.478 0.00 0.00 36.46 6.13
495 496 3.884037 ATGAAAATATTCCTCCCGGCT 57.116 42.857 0.00 0.00 34.49 5.52
496 497 3.662759 TGAAAATATTCCTCCCGGCTT 57.337 42.857 0.00 0.00 34.49 4.35
497 498 3.551846 TGAAAATATTCCTCCCGGCTTC 58.448 45.455 0.00 0.00 34.49 3.86
498 499 2.658807 AAATATTCCTCCCGGCTTCC 57.341 50.000 0.00 0.00 0.00 3.46
499 500 1.518367 AATATTCCTCCCGGCTTCCA 58.482 50.000 0.00 0.00 0.00 3.53
500 501 1.059913 ATATTCCTCCCGGCTTCCAG 58.940 55.000 0.00 0.00 0.00 3.86
501 502 1.696097 TATTCCTCCCGGCTTCCAGC 61.696 60.000 0.00 0.00 41.46 4.85
511 512 2.093216 GCTTCCAGCCAACAGATCG 58.907 57.895 0.00 0.00 34.48 3.69
512 513 0.391661 GCTTCCAGCCAACAGATCGA 60.392 55.000 0.00 0.00 34.48 3.59
513 514 1.745141 GCTTCCAGCCAACAGATCGAT 60.745 52.381 0.00 0.00 34.48 3.59
514 515 1.938577 CTTCCAGCCAACAGATCGATG 59.061 52.381 0.54 0.00 0.00 3.84
515 516 0.178767 TCCAGCCAACAGATCGATGG 59.821 55.000 0.54 0.00 40.52 3.51
516 517 0.178767 CCAGCCAACAGATCGATGGA 59.821 55.000 0.54 0.00 39.96 3.41
517 518 1.579698 CAGCCAACAGATCGATGGAG 58.420 55.000 0.54 0.00 39.96 3.86
518 519 1.134580 CAGCCAACAGATCGATGGAGT 60.135 52.381 0.54 0.00 39.96 3.85
519 520 2.101415 CAGCCAACAGATCGATGGAGTA 59.899 50.000 0.54 0.00 39.96 2.59
520 521 2.363680 AGCCAACAGATCGATGGAGTAG 59.636 50.000 0.54 0.00 39.96 2.57
521 522 2.101582 GCCAACAGATCGATGGAGTAGT 59.898 50.000 0.54 0.00 39.96 2.73
522 523 3.318275 GCCAACAGATCGATGGAGTAGTA 59.682 47.826 0.54 0.00 39.96 1.82
523 524 4.557695 GCCAACAGATCGATGGAGTAGTAG 60.558 50.000 0.54 0.00 39.96 2.57
524 525 4.022762 CCAACAGATCGATGGAGTAGTAGG 60.023 50.000 0.54 0.00 39.96 3.18
549 551 9.005777 GGAAGAGTTAATACCACAATTGTACAA 57.994 33.333 11.53 11.41 0.00 2.41
575 577 3.981071 TGTAGGGGTGAGAACAGATTG 57.019 47.619 0.00 0.00 0.00 2.67
583 585 5.355596 GGGTGAGAACAGATTGATACAGAG 58.644 45.833 0.00 0.00 0.00 3.35
756 783 0.326238 ACAAATCCCTAGCCCCGAGA 60.326 55.000 0.00 0.00 0.00 4.04
815 909 1.153667 GCTGTCCTCTCGCTTCCAG 60.154 63.158 0.00 0.00 0.00 3.86
840 934 1.215382 CTCGTGCGACATGAAGGGA 59.785 57.895 0.00 0.00 0.00 4.20
845 939 0.752658 TGCGACATGAAGGGATCGAT 59.247 50.000 0.00 0.00 36.70 3.59
983 1083 2.512896 GCCCTGGGCGAAGATCAT 59.487 61.111 24.16 0.00 39.62 2.45
986 1086 1.742146 CCTGGGCGAAGATCATCGA 59.258 57.895 23.38 2.43 45.48 3.59
1134 1331 6.773976 ACTTTCTGAAGATGTTTTGGTTGA 57.226 33.333 0.00 0.00 36.69 3.18
1143 1340 9.859427 TGAAGATGTTTTGGTTGAATATGATTC 57.141 29.630 0.00 0.00 0.00 2.52
1208 1405 2.879103 TCCTCCCCTGATGTTGTTTC 57.121 50.000 0.00 0.00 0.00 2.78
1295 1560 4.017808 GAGGGCTATGACTATGGTCGTAT 58.982 47.826 11.15 0.00 44.83 3.06
1455 1795 6.798315 ATGATACATGTGCTTATCTGAAGC 57.202 37.500 9.11 2.32 43.29 3.86
1475 1845 1.337118 GGGTGGACAAAGAATGGCAA 58.663 50.000 0.00 0.00 39.66 4.52
1581 2697 0.179113 GAGGCTGAAGGAAGAGAGCG 60.179 60.000 0.00 0.00 31.89 5.03
1632 2748 4.923236 AGATCAGAACTAGGGATAGGAGGA 59.077 45.833 0.00 0.00 0.00 3.71
1644 2853 7.051696 AGGGATAGGAGGAAAATTTGGTTAA 57.948 36.000 0.00 0.00 0.00 2.01
1673 2961 2.548920 GGTCTGCTGCTCTACACTGTTT 60.549 50.000 0.00 0.00 0.00 2.83
1674 2962 3.306088 GGTCTGCTGCTCTACACTGTTTA 60.306 47.826 0.00 0.00 0.00 2.01
1699 2987 6.599356 TGGTGTTGTAGCTCTAGTGATAAA 57.401 37.500 0.00 0.00 0.00 1.40
1752 3260 2.012673 GGCATGATGTGAGAGGTGAAC 58.987 52.381 0.00 0.00 0.00 3.18
1954 3769 8.991243 AAATACACTCATTTTGACATGAATGG 57.009 30.769 0.00 0.00 35.19 3.16
1958 3773 2.166050 TCATTTTGACATGAATGGCCGG 59.834 45.455 0.00 0.00 33.92 6.13
1970 3785 0.767375 ATGGCCGGCATGAAGTAGAT 59.233 50.000 30.85 2.11 0.00 1.98
2059 3875 3.181448 ACAACTAACAGACCCGGTTTGAT 60.181 43.478 14.85 5.63 0.00 2.57
2060 3876 3.782656 ACTAACAGACCCGGTTTGATT 57.217 42.857 14.85 7.83 0.00 2.57
2061 3877 3.408634 ACTAACAGACCCGGTTTGATTG 58.591 45.455 14.85 6.67 0.00 2.67
2062 3878 2.649531 AACAGACCCGGTTTGATTGA 57.350 45.000 14.85 0.00 0.00 2.57
2063 3879 1.892209 ACAGACCCGGTTTGATTGAC 58.108 50.000 14.85 0.00 0.00 3.18
2064 3880 1.142060 ACAGACCCGGTTTGATTGACA 59.858 47.619 14.85 0.00 0.00 3.58
2065 3881 1.535462 CAGACCCGGTTTGATTGACAC 59.465 52.381 1.68 0.00 0.00 3.67
2078 3894 5.862924 TGATTGACACTACAAGCTTTAGC 57.137 39.130 0.00 0.00 37.13 3.09
2147 4977 0.599558 GCACACATTCAGGCACACAT 59.400 50.000 0.00 0.00 0.00 3.21
2166 5022 4.157656 CACATACCCGGTTTGATTGACAAT 59.842 41.667 14.27 0.00 38.36 2.71
2193 5059 3.492421 AGGCACACATTTGCTAATTCG 57.508 42.857 0.00 0.00 42.56 3.34
2233 5099 0.250727 CTGGCCGTGGAGAAAGGAAA 60.251 55.000 0.00 0.00 0.00 3.13
2236 5102 0.250770 GCCGTGGAGAAAGGAAAGGT 60.251 55.000 0.00 0.00 0.00 3.50
2341 5244 3.080121 CTCGCCTCCTCCCTTGCT 61.080 66.667 0.00 0.00 0.00 3.91
2397 5300 2.906458 CATCCTGGCTCGCTCCTT 59.094 61.111 0.00 0.00 0.00 3.36
2401 5304 2.354401 CCTGGCTCGCTCCTTCTCA 61.354 63.158 0.00 0.00 0.00 3.27
2499 5582 3.663815 GAGGAGGAGAGGACGGGCA 62.664 68.421 0.00 0.00 0.00 5.36
2541 5624 2.515290 GGTTTGTATCGGGGCCGG 60.515 66.667 4.42 4.42 40.25 6.13
2581 5664 1.286248 GGGGGTATGGACTTGTCTGT 58.714 55.000 0.61 0.00 0.00 3.41
2597 5680 3.563808 TGTCTGTGAAATTGCTAAAGCGT 59.436 39.130 0.00 0.00 45.83 5.07
2635 5719 1.675310 CATGCTTCAGGCCCGACAA 60.675 57.895 0.00 0.00 40.92 3.18
2671 5755 4.988598 CGTGTGCAGTTCGGGGCT 62.989 66.667 0.00 0.00 0.00 5.19
2695 5780 6.102663 TGTTTGGGTGATTTTGTTACAACAG 58.897 36.000 0.00 0.00 40.50 3.16
2697 5782 5.923733 TGGGTGATTTTGTTACAACAGTT 57.076 34.783 0.00 0.00 40.50 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.943909 AGTTACATGTACTTAAATCTGTAGCC 57.056 34.615 4.68 0.00 0.00 3.93
8 9 9.938280 TGCTTCAGTAGTTACATGTACTTAAAT 57.062 29.630 4.68 0.00 0.00 1.40
9 10 9.767228 TTGCTTCAGTAGTTACATGTACTTAAA 57.233 29.630 4.68 0.00 0.00 1.52
10 11 9.767228 TTTGCTTCAGTAGTTACATGTACTTAA 57.233 29.630 4.68 0.00 0.00 1.85
11 12 9.767228 TTTTGCTTCAGTAGTTACATGTACTTA 57.233 29.630 4.68 0.00 0.00 2.24
12 13 8.557029 GTTTTGCTTCAGTAGTTACATGTACTT 58.443 33.333 4.68 0.00 0.00 2.24
13 14 7.095774 CGTTTTGCTTCAGTAGTTACATGTACT 60.096 37.037 4.68 8.86 0.00 2.73
14 15 7.007697 CGTTTTGCTTCAGTAGTTACATGTAC 58.992 38.462 4.68 0.00 0.00 2.90
15 16 6.702723 ACGTTTTGCTTCAGTAGTTACATGTA 59.297 34.615 0.08 0.08 0.00 2.29
16 17 5.526111 ACGTTTTGCTTCAGTAGTTACATGT 59.474 36.000 2.69 2.69 0.00 3.21
17 18 5.845953 CACGTTTTGCTTCAGTAGTTACATG 59.154 40.000 0.00 0.00 0.00 3.21
18 19 5.756347 TCACGTTTTGCTTCAGTAGTTACAT 59.244 36.000 0.00 0.00 0.00 2.29
19 20 5.110598 TCACGTTTTGCTTCAGTAGTTACA 58.889 37.500 0.00 0.00 0.00 2.41
20 21 5.646467 TCACGTTTTGCTTCAGTAGTTAC 57.354 39.130 0.00 0.00 0.00 2.50
21 22 6.854496 AATCACGTTTTGCTTCAGTAGTTA 57.146 33.333 0.00 0.00 0.00 2.24
22 23 5.751243 AATCACGTTTTGCTTCAGTAGTT 57.249 34.783 0.00 0.00 0.00 2.24
23 24 5.756347 TGTAATCACGTTTTGCTTCAGTAGT 59.244 36.000 0.00 0.00 0.00 2.73
24 25 6.223138 TGTAATCACGTTTTGCTTCAGTAG 57.777 37.500 0.00 0.00 0.00 2.57
25 26 6.606234 TTGTAATCACGTTTTGCTTCAGTA 57.394 33.333 0.00 0.00 0.00 2.74
32 33 4.321745 CAGCTGATTGTAATCACGTTTTGC 59.678 41.667 8.42 5.03 40.32 3.68
61 62 8.295288 GCACCTTTCCTGATCATCTATAATTTG 58.705 37.037 0.00 0.00 0.00 2.32
62 63 8.223330 AGCACCTTTCCTGATCATCTATAATTT 58.777 33.333 0.00 0.00 0.00 1.82
63 64 7.753630 AGCACCTTTCCTGATCATCTATAATT 58.246 34.615 0.00 0.00 0.00 1.40
65 66 6.753913 AGCACCTTTCCTGATCATCTATAA 57.246 37.500 0.00 0.00 0.00 0.98
67 68 6.753913 TTAGCACCTTTCCTGATCATCTAT 57.246 37.500 0.00 0.00 0.00 1.98
68 69 6.100279 ACATTAGCACCTTTCCTGATCATCTA 59.900 38.462 0.00 0.00 0.00 1.98
69 70 5.104193 ACATTAGCACCTTTCCTGATCATCT 60.104 40.000 0.00 0.00 0.00 2.90
70 71 5.008415 CACATTAGCACCTTTCCTGATCATC 59.992 44.000 0.00 0.00 0.00 2.92
71 72 4.885907 CACATTAGCACCTTTCCTGATCAT 59.114 41.667 0.00 0.00 0.00 2.45
72 73 4.264253 CACATTAGCACCTTTCCTGATCA 58.736 43.478 0.00 0.00 0.00 2.92
73 74 3.065925 GCACATTAGCACCTTTCCTGATC 59.934 47.826 0.00 0.00 0.00 2.92
74 75 3.019564 GCACATTAGCACCTTTCCTGAT 58.980 45.455 0.00 0.00 0.00 2.90
75 76 2.436417 GCACATTAGCACCTTTCCTGA 58.564 47.619 0.00 0.00 0.00 3.86
76 77 1.474077 GGCACATTAGCACCTTTCCTG 59.526 52.381 0.00 0.00 35.83 3.86
77 78 1.075374 TGGCACATTAGCACCTTTCCT 59.925 47.619 0.00 0.00 35.83 3.36
78 79 1.544724 TGGCACATTAGCACCTTTCC 58.455 50.000 0.00 0.00 35.83 3.13
95 96 9.165287 GCATGTGCATCTGTATACCACTAATGG 62.165 44.444 0.00 0.00 46.03 3.16
96 97 6.347969 GCATGTGCATCTGTATACCACTAATG 60.348 42.308 0.00 3.54 41.59 1.90
97 98 5.702670 GCATGTGCATCTGTATACCACTAAT 59.297 40.000 0.00 0.00 41.59 1.73
98 99 5.056480 GCATGTGCATCTGTATACCACTAA 58.944 41.667 0.00 0.00 41.59 2.24
99 100 4.631131 GCATGTGCATCTGTATACCACTA 58.369 43.478 0.00 0.00 41.59 2.74
100 101 3.470709 GCATGTGCATCTGTATACCACT 58.529 45.455 0.00 0.00 41.59 4.00
101 102 3.885484 GCATGTGCATCTGTATACCAC 57.115 47.619 0.00 1.54 41.59 4.16
118 119 4.778958 TCTTTCTTTCCCCATGATTTGCAT 59.221 37.500 0.00 0.00 37.85 3.96
119 120 4.158786 TCTTTCTTTCCCCATGATTTGCA 58.841 39.130 0.00 0.00 0.00 4.08
120 121 4.806640 TCTTTCTTTCCCCATGATTTGC 57.193 40.909 0.00 0.00 0.00 3.68
121 122 6.071221 TGTGATCTTTCTTTCCCCATGATTTG 60.071 38.462 0.00 0.00 0.00 2.32
122 123 6.018469 TGTGATCTTTCTTTCCCCATGATTT 58.982 36.000 0.00 0.00 0.00 2.17
123 124 5.582953 TGTGATCTTTCTTTCCCCATGATT 58.417 37.500 0.00 0.00 0.00 2.57
124 125 5.044624 TCTGTGATCTTTCTTTCCCCATGAT 60.045 40.000 0.00 0.00 0.00 2.45
125 126 4.289410 TCTGTGATCTTTCTTTCCCCATGA 59.711 41.667 0.00 0.00 0.00 3.07
126 127 4.397417 GTCTGTGATCTTTCTTTCCCCATG 59.603 45.833 0.00 0.00 0.00 3.66
127 128 4.593956 GTCTGTGATCTTTCTTTCCCCAT 58.406 43.478 0.00 0.00 0.00 4.00
128 129 3.557054 CGTCTGTGATCTTTCTTTCCCCA 60.557 47.826 0.00 0.00 0.00 4.96
129 130 3.003480 CGTCTGTGATCTTTCTTTCCCC 58.997 50.000 0.00 0.00 0.00 4.81
130 131 2.416893 GCGTCTGTGATCTTTCTTTCCC 59.583 50.000 0.00 0.00 0.00 3.97
131 132 2.416893 GGCGTCTGTGATCTTTCTTTCC 59.583 50.000 0.00 0.00 0.00 3.13
132 133 3.067106 TGGCGTCTGTGATCTTTCTTTC 58.933 45.455 0.00 0.00 0.00 2.62
133 134 3.126001 TGGCGTCTGTGATCTTTCTTT 57.874 42.857 0.00 0.00 0.00 2.52
134 135 2.839486 TGGCGTCTGTGATCTTTCTT 57.161 45.000 0.00 0.00 0.00 2.52
135 136 2.234661 TGATGGCGTCTGTGATCTTTCT 59.765 45.455 8.40 0.00 0.00 2.52
136 137 2.606725 CTGATGGCGTCTGTGATCTTTC 59.393 50.000 8.40 0.00 0.00 2.62
137 138 2.027745 ACTGATGGCGTCTGTGATCTTT 60.028 45.455 17.14 0.00 37.58 2.52
138 139 1.552337 ACTGATGGCGTCTGTGATCTT 59.448 47.619 17.14 0.00 37.58 2.40
139 140 1.189752 ACTGATGGCGTCTGTGATCT 58.810 50.000 17.14 0.00 37.58 2.75
140 141 3.748863 ACTGATGGCGTCTGTGATC 57.251 52.632 17.14 0.00 37.58 2.92
144 145 1.375140 CTGCACTGATGGCGTCTGT 60.375 57.895 12.84 12.84 39.31 3.41
145 146 0.108662 TACTGCACTGATGGCGTCTG 60.109 55.000 11.55 11.55 0.00 3.51
146 147 0.826715 ATACTGCACTGATGGCGTCT 59.173 50.000 8.40 0.00 0.00 4.18
147 148 1.656652 AATACTGCACTGATGGCGTC 58.343 50.000 0.00 0.00 0.00 5.19
148 149 2.979814 TAATACTGCACTGATGGCGT 57.020 45.000 0.00 0.00 0.00 5.68
149 150 3.392882 TCATAATACTGCACTGATGGCG 58.607 45.455 0.00 0.00 0.00 5.69
150 151 4.999311 TGATCATAATACTGCACTGATGGC 59.001 41.667 0.00 0.00 0.00 4.40
151 152 7.500720 TTTGATCATAATACTGCACTGATGG 57.499 36.000 0.00 0.00 0.00 3.51
155 156 9.836076 CCATAATTTGATCATAATACTGCACTG 57.164 33.333 0.00 0.00 0.00 3.66
156 157 9.017509 CCCATAATTTGATCATAATACTGCACT 57.982 33.333 0.00 0.00 0.00 4.40
157 158 9.013229 TCCCATAATTTGATCATAATACTGCAC 57.987 33.333 0.00 0.00 0.00 4.57
158 159 9.585369 TTCCCATAATTTGATCATAATACTGCA 57.415 29.630 0.00 0.00 0.00 4.41
166 167 9.598517 GCAAACTTTTCCCATAATTTGATCATA 57.401 29.630 0.00 0.00 30.35 2.15
167 168 8.102047 TGCAAACTTTTCCCATAATTTGATCAT 58.898 29.630 0.00 0.00 30.35 2.45
168 169 7.448420 TGCAAACTTTTCCCATAATTTGATCA 58.552 30.769 0.00 0.00 30.35 2.92
169 170 7.413328 GCTGCAAACTTTTCCCATAATTTGATC 60.413 37.037 0.00 0.00 30.35 2.92
170 171 6.372381 GCTGCAAACTTTTCCCATAATTTGAT 59.628 34.615 0.00 0.00 30.35 2.57
171 172 5.700373 GCTGCAAACTTTTCCCATAATTTGA 59.300 36.000 0.00 0.00 30.35 2.69
172 173 5.702209 AGCTGCAAACTTTTCCCATAATTTG 59.298 36.000 1.02 0.00 0.00 2.32
173 174 5.868454 AGCTGCAAACTTTTCCCATAATTT 58.132 33.333 1.02 0.00 0.00 1.82
174 175 5.488262 AGCTGCAAACTTTTCCCATAATT 57.512 34.783 1.02 0.00 0.00 1.40
175 176 5.394553 GCTAGCTGCAAACTTTTCCCATAAT 60.395 40.000 7.70 0.00 42.31 1.28
176 177 4.082245 GCTAGCTGCAAACTTTTCCCATAA 60.082 41.667 7.70 0.00 42.31 1.90
177 178 3.443681 GCTAGCTGCAAACTTTTCCCATA 59.556 43.478 7.70 0.00 42.31 2.74
178 179 2.232208 GCTAGCTGCAAACTTTTCCCAT 59.768 45.455 7.70 0.00 42.31 4.00
179 180 1.613437 GCTAGCTGCAAACTTTTCCCA 59.387 47.619 7.70 0.00 42.31 4.37
180 181 1.401539 CGCTAGCTGCAAACTTTTCCC 60.402 52.381 13.93 0.00 43.06 3.97
181 182 1.266989 ACGCTAGCTGCAAACTTTTCC 59.733 47.619 13.93 0.00 43.06 3.13
182 183 2.032030 TGACGCTAGCTGCAAACTTTTC 60.032 45.455 13.93 0.00 43.06 2.29
183 184 1.946768 TGACGCTAGCTGCAAACTTTT 59.053 42.857 13.93 0.00 43.06 2.27
184 185 1.264288 GTGACGCTAGCTGCAAACTTT 59.736 47.619 13.93 0.00 43.06 2.66
185 186 0.868406 GTGACGCTAGCTGCAAACTT 59.132 50.000 13.93 0.00 43.06 2.66
186 187 1.284982 CGTGACGCTAGCTGCAAACT 61.285 55.000 13.93 0.00 43.06 2.66
187 188 1.130613 CGTGACGCTAGCTGCAAAC 59.869 57.895 13.93 3.24 43.06 2.93
188 189 0.878523 AACGTGACGCTAGCTGCAAA 60.879 50.000 13.93 0.00 43.06 3.68
189 190 1.300620 AACGTGACGCTAGCTGCAA 60.301 52.632 13.93 0.00 43.06 4.08
190 191 2.021584 CAACGTGACGCTAGCTGCA 61.022 57.895 13.93 7.73 43.06 4.41
191 192 2.772189 CAACGTGACGCTAGCTGC 59.228 61.111 13.93 4.92 38.57 5.25
192 193 2.772189 GCAACGTGACGCTAGCTG 59.228 61.111 13.93 9.03 0.00 4.24
193 194 2.805353 CGCAACGTGACGCTAGCT 60.805 61.111 13.93 0.00 0.00 3.32
199 200 4.986531 CGGTTGCGCAACGTGACG 62.987 66.667 38.42 32.25 42.02 4.35
200 201 3.833176 GACGGTTGCGCAACGTGAC 62.833 63.158 36.76 29.85 42.02 3.67
201 202 3.632107 GACGGTTGCGCAACGTGA 61.632 61.111 36.76 14.13 42.02 4.35
202 203 3.636043 AGACGGTTGCGCAACGTG 61.636 61.111 36.76 33.82 42.02 4.49
203 204 3.636043 CAGACGGTTGCGCAACGT 61.636 61.111 38.42 36.07 42.02 3.99
204 205 2.368131 TTTCAGACGGTTGCGCAACG 62.368 55.000 38.42 33.71 42.02 4.10
205 206 0.928451 GTTTCAGACGGTTGCGCAAC 60.928 55.000 38.71 38.71 40.45 4.17
206 207 1.353804 GTTTCAGACGGTTGCGCAA 59.646 52.632 21.02 21.02 0.00 4.85
207 208 1.815840 TGTTTCAGACGGTTGCGCA 60.816 52.632 5.66 5.66 0.00 6.09
208 209 1.368850 GTGTTTCAGACGGTTGCGC 60.369 57.895 0.00 0.00 0.00 6.09
209 210 0.042188 CAGTGTTTCAGACGGTTGCG 60.042 55.000 0.00 0.00 0.00 4.85
210 211 0.317020 GCAGTGTTTCAGACGGTTGC 60.317 55.000 0.00 0.00 0.00 4.17
211 212 0.307760 GGCAGTGTTTCAGACGGTTG 59.692 55.000 0.00 0.00 0.00 3.77
212 213 0.107410 TGGCAGTGTTTCAGACGGTT 60.107 50.000 0.00 0.00 0.00 4.44
213 214 0.532862 CTGGCAGTGTTTCAGACGGT 60.533 55.000 6.28 0.00 0.00 4.83
214 215 0.249868 TCTGGCAGTGTTTCAGACGG 60.250 55.000 15.27 0.00 33.21 4.79
215 216 1.581934 TTCTGGCAGTGTTTCAGACG 58.418 50.000 15.27 0.00 37.28 4.18
216 217 3.565482 TCATTTCTGGCAGTGTTTCAGAC 59.435 43.478 15.27 0.00 37.28 3.51
217 218 3.565482 GTCATTTCTGGCAGTGTTTCAGA 59.435 43.478 15.27 8.27 35.95 3.27
218 219 3.304928 GGTCATTTCTGGCAGTGTTTCAG 60.305 47.826 15.27 0.00 0.00 3.02
219 220 2.622942 GGTCATTTCTGGCAGTGTTTCA 59.377 45.455 15.27 0.00 0.00 2.69
220 221 2.622942 TGGTCATTTCTGGCAGTGTTTC 59.377 45.455 15.27 2.50 0.00 2.78
221 222 2.665165 TGGTCATTTCTGGCAGTGTTT 58.335 42.857 15.27 0.00 0.00 2.83
222 223 2.362077 GTTGGTCATTTCTGGCAGTGTT 59.638 45.455 15.27 0.00 0.00 3.32
223 224 1.956477 GTTGGTCATTTCTGGCAGTGT 59.044 47.619 15.27 0.00 0.00 3.55
224 225 1.955778 TGTTGGTCATTTCTGGCAGTG 59.044 47.619 15.27 5.79 0.00 3.66
225 226 1.956477 GTGTTGGTCATTTCTGGCAGT 59.044 47.619 15.27 0.00 0.00 4.40
226 227 1.955778 TGTGTTGGTCATTTCTGGCAG 59.044 47.619 8.58 8.58 0.00 4.85
227 228 1.680735 GTGTGTTGGTCATTTCTGGCA 59.319 47.619 0.00 0.00 0.00 4.92
228 229 1.680735 TGTGTGTTGGTCATTTCTGGC 59.319 47.619 0.00 0.00 0.00 4.85
229 230 4.097741 TCTTTGTGTGTTGGTCATTTCTGG 59.902 41.667 0.00 0.00 0.00 3.86
230 231 5.036737 GTCTTTGTGTGTTGGTCATTTCTG 58.963 41.667 0.00 0.00 0.00 3.02
231 232 4.201910 CGTCTTTGTGTGTTGGTCATTTCT 60.202 41.667 0.00 0.00 0.00 2.52
232 233 4.035017 CGTCTTTGTGTGTTGGTCATTTC 58.965 43.478 0.00 0.00 0.00 2.17
233 234 3.181491 CCGTCTTTGTGTGTTGGTCATTT 60.181 43.478 0.00 0.00 0.00 2.32
234 235 2.357637 CCGTCTTTGTGTGTTGGTCATT 59.642 45.455 0.00 0.00 0.00 2.57
235 236 1.946768 CCGTCTTTGTGTGTTGGTCAT 59.053 47.619 0.00 0.00 0.00 3.06
236 237 1.066071 TCCGTCTTTGTGTGTTGGTCA 60.066 47.619 0.00 0.00 0.00 4.02
237 238 1.658994 TCCGTCTTTGTGTGTTGGTC 58.341 50.000 0.00 0.00 0.00 4.02
238 239 2.014128 CTTCCGTCTTTGTGTGTTGGT 58.986 47.619 0.00 0.00 0.00 3.67
239 240 1.268539 GCTTCCGTCTTTGTGTGTTGG 60.269 52.381 0.00 0.00 0.00 3.77
240 241 1.594518 CGCTTCCGTCTTTGTGTGTTG 60.595 52.381 0.00 0.00 0.00 3.33
241 242 0.655733 CGCTTCCGTCTTTGTGTGTT 59.344 50.000 0.00 0.00 0.00 3.32
242 243 0.179094 TCGCTTCCGTCTTTGTGTGT 60.179 50.000 0.00 0.00 35.54 3.72
243 244 0.934496 TTCGCTTCCGTCTTTGTGTG 59.066 50.000 0.00 0.00 35.54 3.82
244 245 1.329599 GTTTCGCTTCCGTCTTTGTGT 59.670 47.619 0.00 0.00 35.54 3.72
245 246 1.656429 CGTTTCGCTTCCGTCTTTGTG 60.656 52.381 0.00 0.00 35.54 3.33
246 247 0.580104 CGTTTCGCTTCCGTCTTTGT 59.420 50.000 0.00 0.00 35.54 2.83
247 248 0.580104 ACGTTTCGCTTCCGTCTTTG 59.420 50.000 0.00 0.00 35.54 2.77
248 249 2.056577 CTACGTTTCGCTTCCGTCTTT 58.943 47.619 0.00 0.00 36.12 2.52
249 250 1.267806 TCTACGTTTCGCTTCCGTCTT 59.732 47.619 0.00 0.00 36.12 3.01
250 251 0.877071 TCTACGTTTCGCTTCCGTCT 59.123 50.000 0.00 0.00 36.12 4.18
251 252 1.135859 TCTCTACGTTTCGCTTCCGTC 60.136 52.381 0.00 0.00 36.12 4.79
252 253 0.877071 TCTCTACGTTTCGCTTCCGT 59.123 50.000 0.00 0.00 38.53 4.69
253 254 2.110226 GATCTCTACGTTTCGCTTCCG 58.890 52.381 0.00 0.00 0.00 4.30
254 255 3.109619 CTGATCTCTACGTTTCGCTTCC 58.890 50.000 0.00 0.00 0.00 3.46
255 256 3.109619 CCTGATCTCTACGTTTCGCTTC 58.890 50.000 0.00 0.00 0.00 3.86
256 257 2.735762 GCCTGATCTCTACGTTTCGCTT 60.736 50.000 0.00 0.00 0.00 4.68
257 258 1.202313 GCCTGATCTCTACGTTTCGCT 60.202 52.381 0.00 0.00 0.00 4.93
258 259 1.201343 GCCTGATCTCTACGTTTCGC 58.799 55.000 0.00 0.00 0.00 4.70
259 260 1.467875 CGCCTGATCTCTACGTTTCG 58.532 55.000 0.00 0.00 0.00 3.46
260 261 1.404391 TCCGCCTGATCTCTACGTTTC 59.596 52.381 0.00 0.00 0.00 2.78
261 262 1.134560 GTCCGCCTGATCTCTACGTTT 59.865 52.381 0.00 0.00 0.00 3.60
262 263 0.739561 GTCCGCCTGATCTCTACGTT 59.260 55.000 0.00 0.00 0.00 3.99
263 264 1.102222 GGTCCGCCTGATCTCTACGT 61.102 60.000 0.00 0.00 0.00 3.57
264 265 1.655329 GGTCCGCCTGATCTCTACG 59.345 63.158 0.00 0.00 0.00 3.51
265 266 1.102222 ACGGTCCGCCTGATCTCTAC 61.102 60.000 12.28 0.00 0.00 2.59
266 267 1.101635 CACGGTCCGCCTGATCTCTA 61.102 60.000 12.28 0.00 0.00 2.43
267 268 2.043852 ACGGTCCGCCTGATCTCT 60.044 61.111 12.28 0.00 0.00 3.10
268 269 2.105128 CACGGTCCGCCTGATCTC 59.895 66.667 12.28 0.00 0.00 2.75
269 270 2.283529 AACACGGTCCGCCTGATCT 61.284 57.895 12.28 0.00 0.00 2.75
270 271 2.100631 CAACACGGTCCGCCTGATC 61.101 63.158 12.28 0.00 0.00 2.92
271 272 2.047274 CAACACGGTCCGCCTGAT 60.047 61.111 12.28 0.00 0.00 2.90
272 273 4.980805 GCAACACGGTCCGCCTGA 62.981 66.667 12.28 0.00 0.00 3.86
273 274 4.988598 AGCAACACGGTCCGCCTG 62.989 66.667 12.28 5.69 0.00 4.85
274 275 4.988598 CAGCAACACGGTCCGCCT 62.989 66.667 12.28 0.00 0.00 5.52
277 278 2.048597 TAGCAGCAACACGGTCCG 60.049 61.111 10.48 10.48 0.00 4.79
278 279 1.741770 CCTAGCAGCAACACGGTCC 60.742 63.158 0.00 0.00 0.00 4.46
279 280 1.004918 ACCTAGCAGCAACACGGTC 60.005 57.895 0.00 0.00 0.00 4.79
280 281 1.301716 CACCTAGCAGCAACACGGT 60.302 57.895 0.00 0.00 0.00 4.83
281 282 2.680913 GCACCTAGCAGCAACACGG 61.681 63.158 0.00 0.00 44.79 4.94
282 283 2.863153 GCACCTAGCAGCAACACG 59.137 61.111 0.00 0.00 44.79 4.49
291 292 2.695666 TGAGTAGATCTTGGCACCTAGC 59.304 50.000 0.00 0.00 44.65 3.42
292 293 3.068873 GGTGAGTAGATCTTGGCACCTAG 59.931 52.174 22.95 0.00 41.82 3.02
293 294 3.031736 GGTGAGTAGATCTTGGCACCTA 58.968 50.000 22.95 0.21 41.82 3.08
294 295 1.834263 GGTGAGTAGATCTTGGCACCT 59.166 52.381 22.95 4.60 41.82 4.00
295 296 1.555075 TGGTGAGTAGATCTTGGCACC 59.445 52.381 23.24 23.24 44.50 5.01
296 297 2.028112 TGTGGTGAGTAGATCTTGGCAC 60.028 50.000 0.00 6.76 0.00 5.01
297 298 2.256306 TGTGGTGAGTAGATCTTGGCA 58.744 47.619 0.00 0.00 0.00 4.92
298 299 3.334583 TTGTGGTGAGTAGATCTTGGC 57.665 47.619 0.00 0.00 0.00 4.52
299 300 4.154918 GCTTTTGTGGTGAGTAGATCTTGG 59.845 45.833 0.00 0.00 0.00 3.61
300 301 4.154918 GGCTTTTGTGGTGAGTAGATCTTG 59.845 45.833 0.00 0.00 0.00 3.02
301 302 4.327680 GGCTTTTGTGGTGAGTAGATCTT 58.672 43.478 0.00 0.00 0.00 2.40
302 303 3.617531 CGGCTTTTGTGGTGAGTAGATCT 60.618 47.826 0.00 0.00 0.00 2.75
303 304 2.673368 CGGCTTTTGTGGTGAGTAGATC 59.327 50.000 0.00 0.00 0.00 2.75
304 305 2.038557 ACGGCTTTTGTGGTGAGTAGAT 59.961 45.455 0.00 0.00 0.00 1.98
305 306 1.414919 ACGGCTTTTGTGGTGAGTAGA 59.585 47.619 0.00 0.00 0.00 2.59
306 307 1.798813 GACGGCTTTTGTGGTGAGTAG 59.201 52.381 0.00 0.00 0.00 2.57
307 308 1.541670 GGACGGCTTTTGTGGTGAGTA 60.542 52.381 0.00 0.00 0.00 2.59
308 309 0.818040 GGACGGCTTTTGTGGTGAGT 60.818 55.000 0.00 0.00 0.00 3.41
309 310 1.515521 GGGACGGCTTTTGTGGTGAG 61.516 60.000 0.00 0.00 0.00 3.51
310 311 1.527380 GGGACGGCTTTTGTGGTGA 60.527 57.895 0.00 0.00 0.00 4.02
311 312 1.106944 AAGGGACGGCTTTTGTGGTG 61.107 55.000 0.00 0.00 0.00 4.17
312 313 0.822121 GAAGGGACGGCTTTTGTGGT 60.822 55.000 0.00 0.00 0.00 4.16
313 314 0.821711 TGAAGGGACGGCTTTTGTGG 60.822 55.000 0.00 0.00 0.00 4.17
314 315 1.200020 GATGAAGGGACGGCTTTTGTG 59.800 52.381 0.00 0.00 0.00 3.33
315 316 1.534729 GATGAAGGGACGGCTTTTGT 58.465 50.000 0.00 0.00 0.00 2.83
316 317 0.811281 GGATGAAGGGACGGCTTTTG 59.189 55.000 0.00 0.00 0.00 2.44
317 318 0.404040 TGGATGAAGGGACGGCTTTT 59.596 50.000 0.00 0.00 0.00 2.27
318 319 0.625849 ATGGATGAAGGGACGGCTTT 59.374 50.000 0.00 0.00 0.00 3.51
319 320 0.181350 GATGGATGAAGGGACGGCTT 59.819 55.000 0.00 0.00 0.00 4.35
320 321 1.700042 GGATGGATGAAGGGACGGCT 61.700 60.000 0.00 0.00 0.00 5.52
321 322 1.227973 GGATGGATGAAGGGACGGC 60.228 63.158 0.00 0.00 0.00 5.68
322 323 0.767375 ATGGATGGATGAAGGGACGG 59.233 55.000 0.00 0.00 0.00 4.79
323 324 1.417517 TCATGGATGGATGAAGGGACG 59.582 52.381 0.00 0.00 29.11 4.79
324 325 2.487986 GGTCATGGATGGATGAAGGGAC 60.488 54.545 0.00 0.00 34.11 4.46
325 326 1.776667 GGTCATGGATGGATGAAGGGA 59.223 52.381 0.00 0.00 34.11 4.20
326 327 1.202976 GGGTCATGGATGGATGAAGGG 60.203 57.143 0.00 0.00 34.11 3.95
327 328 1.496001 TGGGTCATGGATGGATGAAGG 59.504 52.381 0.00 0.00 34.11 3.46
328 329 2.440627 TCTGGGTCATGGATGGATGAAG 59.559 50.000 0.00 0.00 34.11 3.02
329 330 2.490961 TCTGGGTCATGGATGGATGAA 58.509 47.619 0.00 0.00 34.11 2.57
330 331 2.195153 TCTGGGTCATGGATGGATGA 57.805 50.000 0.00 0.00 0.00 2.92
331 332 3.301794 TTTCTGGGTCATGGATGGATG 57.698 47.619 0.00 0.00 0.00 3.51
332 333 5.668135 TTATTTCTGGGTCATGGATGGAT 57.332 39.130 0.00 0.00 0.00 3.41
333 334 5.464588 TTTATTTCTGGGTCATGGATGGA 57.535 39.130 0.00 0.00 0.00 3.41
334 335 6.777091 TGTATTTATTTCTGGGTCATGGATGG 59.223 38.462 0.00 0.00 0.00 3.51
335 336 7.822161 TGTATTTATTTCTGGGTCATGGATG 57.178 36.000 0.00 0.00 0.00 3.51
336 337 7.039504 GCATGTATTTATTTCTGGGTCATGGAT 60.040 37.037 0.00 0.00 33.28 3.41
337 338 6.265196 GCATGTATTTATTTCTGGGTCATGGA 59.735 38.462 0.00 0.00 33.28 3.41
338 339 6.449698 GCATGTATTTATTTCTGGGTCATGG 58.550 40.000 0.00 0.00 33.28 3.66
339 340 6.144854 CGCATGTATTTATTTCTGGGTCATG 58.855 40.000 0.00 0.00 34.99 3.07
340 341 5.827797 ACGCATGTATTTATTTCTGGGTCAT 59.172 36.000 0.00 0.00 0.00 3.06
341 342 5.189928 ACGCATGTATTTATTTCTGGGTCA 58.810 37.500 0.00 0.00 0.00 4.02
342 343 5.277828 GGACGCATGTATTTATTTCTGGGTC 60.278 44.000 8.50 8.50 42.44 4.46
343 344 4.578928 GGACGCATGTATTTATTTCTGGGT 59.421 41.667 0.00 0.00 33.24 4.51
344 345 4.578516 TGGACGCATGTATTTATTTCTGGG 59.421 41.667 0.00 0.00 0.00 4.45
345 346 5.065859 TGTGGACGCATGTATTTATTTCTGG 59.934 40.000 0.00 0.00 0.00 3.86
346 347 6.117911 TGTGGACGCATGTATTTATTTCTG 57.882 37.500 0.00 0.00 0.00 3.02
347 348 5.880332 ACTGTGGACGCATGTATTTATTTCT 59.120 36.000 0.00 0.00 0.00 2.52
348 349 5.965334 CACTGTGGACGCATGTATTTATTTC 59.035 40.000 0.00 0.00 0.00 2.17
349 350 5.645929 TCACTGTGGACGCATGTATTTATTT 59.354 36.000 8.11 0.00 0.00 1.40
350 351 5.182487 TCACTGTGGACGCATGTATTTATT 58.818 37.500 8.11 0.00 0.00 1.40
351 352 4.765273 TCACTGTGGACGCATGTATTTAT 58.235 39.130 8.11 0.00 0.00 1.40
352 353 4.180817 CTCACTGTGGACGCATGTATTTA 58.819 43.478 8.11 0.00 0.00 1.40
353 354 3.002791 CTCACTGTGGACGCATGTATTT 58.997 45.455 8.11 0.00 0.00 1.40
354 355 2.621338 CTCACTGTGGACGCATGTATT 58.379 47.619 8.11 0.00 0.00 1.89
355 356 1.740380 GCTCACTGTGGACGCATGTAT 60.740 52.381 8.11 0.00 0.00 2.29
356 357 0.389817 GCTCACTGTGGACGCATGTA 60.390 55.000 8.11 0.00 0.00 2.29
357 358 1.669115 GCTCACTGTGGACGCATGT 60.669 57.895 8.11 0.00 0.00 3.21
358 359 0.108662 TAGCTCACTGTGGACGCATG 60.109 55.000 8.11 0.00 0.00 4.06
359 360 0.174389 CTAGCTCACTGTGGACGCAT 59.826 55.000 8.11 2.54 0.00 4.73
360 361 1.586541 CTAGCTCACTGTGGACGCA 59.413 57.895 8.11 0.39 0.00 5.24
361 362 1.807573 GCTAGCTCACTGTGGACGC 60.808 63.158 7.70 8.51 0.00 5.19
362 363 1.153745 GGCTAGCTCACTGTGGACG 60.154 63.158 15.72 0.00 0.00 4.79
363 364 0.539051 ATGGCTAGCTCACTGTGGAC 59.461 55.000 15.72 0.37 0.00 4.02
364 365 0.826715 GATGGCTAGCTCACTGTGGA 59.173 55.000 15.72 0.00 0.00 4.02
365 366 0.529337 CGATGGCTAGCTCACTGTGG 60.529 60.000 15.72 0.00 0.00 4.17
366 367 1.150567 GCGATGGCTAGCTCACTGTG 61.151 60.000 15.72 0.17 35.83 3.66
367 368 1.142748 GCGATGGCTAGCTCACTGT 59.857 57.895 15.72 0.00 35.83 3.55
368 369 1.593750 GGCGATGGCTAGCTCACTG 60.594 63.158 15.72 8.13 39.81 3.66
369 370 2.801631 GGGCGATGGCTAGCTCACT 61.802 63.158 15.72 1.91 39.81 3.41
370 371 2.280457 GGGCGATGGCTAGCTCAC 60.280 66.667 15.72 5.19 39.81 3.51
371 372 3.550431 GGGGCGATGGCTAGCTCA 61.550 66.667 15.72 11.42 39.81 4.26
372 373 4.321966 GGGGGCGATGGCTAGCTC 62.322 72.222 15.72 4.14 39.81 4.09
374 375 4.937431 GTGGGGGCGATGGCTAGC 62.937 72.222 6.04 6.04 39.81 3.42
375 376 4.256180 GGTGGGGGCGATGGCTAG 62.256 72.222 0.00 0.00 39.81 3.42
385 386 2.611486 TTTACTCCGGGGTGGGGG 60.611 66.667 20.02 0.00 45.67 5.40
387 388 2.271173 GCTTTACTCCGGGGTGGG 59.729 66.667 20.02 8.06 38.76 4.61
388 389 2.271173 GGCTTTACTCCGGGGTGG 59.729 66.667 20.02 8.46 40.09 4.61
389 390 2.125269 CGGCTTTACTCCGGGGTG 60.125 66.667 20.02 0.29 42.99 4.61
390 391 4.091939 GCGGCTTTACTCCGGGGT 62.092 66.667 13.96 13.96 46.51 4.95
395 396 2.513897 ATGGCGCGGCTTTACTCC 60.514 61.111 33.23 11.30 0.00 3.85
396 397 2.709475 CATGGCGCGGCTTTACTC 59.291 61.111 33.23 0.11 0.00 2.59
397 398 3.508840 GCATGGCGCGGCTTTACT 61.509 61.111 33.23 10.11 0.00 2.24
398 399 1.781025 TATGCATGGCGCGGCTTTAC 61.781 55.000 33.23 20.40 46.97 2.01
399 400 1.506309 CTATGCATGGCGCGGCTTTA 61.506 55.000 33.23 17.96 46.97 1.85
400 401 2.828095 TATGCATGGCGCGGCTTT 60.828 55.556 33.23 18.14 46.97 3.51
401 402 3.282157 CTATGCATGGCGCGGCTT 61.282 61.111 33.23 24.71 46.97 4.35
404 405 4.021631 CAGCTATGCATGGCGCGG 62.022 66.667 26.72 17.40 46.97 6.46
405 406 4.021631 CCAGCTATGCATGGCGCG 62.022 66.667 26.72 21.39 46.97 6.86
406 407 2.903855 ACCAGCTATGCATGGCGC 60.904 61.111 26.72 17.29 40.45 6.53
407 408 2.549198 CCACCAGCTATGCATGGCG 61.549 63.158 26.72 20.78 40.45 5.69
408 409 1.039233 AACCACCAGCTATGCATGGC 61.039 55.000 26.06 26.06 40.45 4.40
409 410 1.477553 AAACCACCAGCTATGCATGG 58.522 50.000 10.16 7.77 42.60 3.66
410 411 2.883574 CAAAACCACCAGCTATGCATG 58.116 47.619 10.16 0.26 0.00 4.06
411 412 1.205417 GCAAAACCACCAGCTATGCAT 59.795 47.619 3.79 3.79 32.80 3.96
412 413 0.602562 GCAAAACCACCAGCTATGCA 59.397 50.000 0.00 0.00 32.80 3.96
413 414 0.890683 AGCAAAACCACCAGCTATGC 59.109 50.000 0.00 0.00 35.19 3.14
414 415 1.888512 ACAGCAAAACCACCAGCTATG 59.111 47.619 0.00 0.00 35.19 2.23
415 416 2.292828 ACAGCAAAACCACCAGCTAT 57.707 45.000 0.00 0.00 35.19 2.97
416 417 2.065899 AACAGCAAAACCACCAGCTA 57.934 45.000 0.00 0.00 35.19 3.32
417 418 1.136891 GAAACAGCAAAACCACCAGCT 59.863 47.619 0.00 0.00 37.95 4.24
418 419 1.136891 AGAAACAGCAAAACCACCAGC 59.863 47.619 0.00 0.00 0.00 4.85
419 420 2.813061 CAGAAACAGCAAAACCACCAG 58.187 47.619 0.00 0.00 0.00 4.00
420 421 1.134848 GCAGAAACAGCAAAACCACCA 60.135 47.619 0.00 0.00 0.00 4.17
421 422 1.134848 TGCAGAAACAGCAAAACCACC 60.135 47.619 0.00 0.00 39.39 4.61
422 423 1.926510 GTGCAGAAACAGCAAAACCAC 59.073 47.619 0.00 0.00 44.64 4.16
423 424 1.134848 GGTGCAGAAACAGCAAAACCA 60.135 47.619 0.00 0.00 44.64 3.67
424 425 1.570813 GGTGCAGAAACAGCAAAACC 58.429 50.000 0.00 0.00 44.64 3.27
425 426 1.199624 CGGTGCAGAAACAGCAAAAC 58.800 50.000 0.00 0.00 44.64 2.43
426 427 0.527385 GCGGTGCAGAAACAGCAAAA 60.527 50.000 0.00 0.00 44.64 2.44
427 428 1.065600 GCGGTGCAGAAACAGCAAA 59.934 52.632 0.00 0.00 44.64 3.68
428 429 1.785041 GAGCGGTGCAGAAACAGCAA 61.785 55.000 0.00 0.00 44.64 3.91
429 430 2.203195 AGCGGTGCAGAAACAGCA 60.203 55.556 0.00 0.00 42.80 4.41
430 431 2.558313 GAGCGGTGCAGAAACAGC 59.442 61.111 0.00 0.00 40.97 4.40
431 432 1.597854 TGGAGCGGTGCAGAAACAG 60.598 57.895 4.13 0.00 0.00 3.16
432 433 1.891919 GTGGAGCGGTGCAGAAACA 60.892 57.895 9.74 0.00 0.00 2.83
433 434 1.569479 GAGTGGAGCGGTGCAGAAAC 61.569 60.000 9.74 0.00 0.00 2.78
434 435 1.301716 GAGTGGAGCGGTGCAGAAA 60.302 57.895 9.74 0.00 0.00 2.52
435 436 1.830587 ATGAGTGGAGCGGTGCAGAA 61.831 55.000 9.74 0.00 0.00 3.02
436 437 2.230994 GATGAGTGGAGCGGTGCAGA 62.231 60.000 9.74 0.00 0.00 4.26
437 438 1.812922 GATGAGTGGAGCGGTGCAG 60.813 63.158 9.74 0.00 0.00 4.41
438 439 2.265739 GATGAGTGGAGCGGTGCA 59.734 61.111 4.13 4.13 0.00 4.57
439 440 2.512515 GGATGAGTGGAGCGGTGC 60.513 66.667 0.00 0.00 0.00 5.01
440 441 2.187946 GGGATGAGTGGAGCGGTG 59.812 66.667 0.00 0.00 0.00 4.94
441 442 2.284625 TGGGATGAGTGGAGCGGT 60.285 61.111 0.00 0.00 0.00 5.68
442 443 2.187946 GTGGGATGAGTGGAGCGG 59.812 66.667 0.00 0.00 0.00 5.52
443 444 2.187946 GGTGGGATGAGTGGAGCG 59.812 66.667 0.00 0.00 0.00 5.03
444 445 1.222936 CAGGTGGGATGAGTGGAGC 59.777 63.158 0.00 0.00 0.00 4.70
445 446 1.222936 GCAGGTGGGATGAGTGGAG 59.777 63.158 0.00 0.00 0.00 3.86
446 447 2.300967 GGCAGGTGGGATGAGTGGA 61.301 63.158 0.00 0.00 0.00 4.02
447 448 2.273449 GGCAGGTGGGATGAGTGG 59.727 66.667 0.00 0.00 0.00 4.00
448 449 1.377725 GTGGCAGGTGGGATGAGTG 60.378 63.158 0.00 0.00 0.00 3.51
449 450 2.606587 GGTGGCAGGTGGGATGAGT 61.607 63.158 0.00 0.00 0.00 3.41
450 451 2.273449 GGTGGCAGGTGGGATGAG 59.727 66.667 0.00 0.00 0.00 2.90
451 452 3.716195 CGGTGGCAGGTGGGATGA 61.716 66.667 0.00 0.00 0.00 2.92
452 453 2.556840 ATTCGGTGGCAGGTGGGATG 62.557 60.000 0.00 0.00 0.00 3.51
453 454 1.863155 AATTCGGTGGCAGGTGGGAT 61.863 55.000 0.00 0.00 0.00 3.85
454 455 2.534396 AATTCGGTGGCAGGTGGGA 61.534 57.895 0.00 0.00 0.00 4.37
455 456 2.035626 AATTCGGTGGCAGGTGGG 59.964 61.111 0.00 0.00 0.00 4.61
456 457 0.893270 TTCAATTCGGTGGCAGGTGG 60.893 55.000 0.00 0.00 0.00 4.61
457 458 1.135315 CATTCAATTCGGTGGCAGGTG 60.135 52.381 0.00 0.00 0.00 4.00
458 459 1.176527 CATTCAATTCGGTGGCAGGT 58.823 50.000 0.00 0.00 0.00 4.00
459 460 1.462616 TCATTCAATTCGGTGGCAGG 58.537 50.000 0.00 0.00 0.00 4.85
460 461 3.574284 TTTCATTCAATTCGGTGGCAG 57.426 42.857 0.00 0.00 0.00 4.85
461 462 4.533919 ATTTTCATTCAATTCGGTGGCA 57.466 36.364 0.00 0.00 0.00 4.92
462 463 6.200854 GGAATATTTTCATTCAATTCGGTGGC 59.799 38.462 0.00 0.00 36.77 5.01
463 464 7.491682 AGGAATATTTTCATTCAATTCGGTGG 58.508 34.615 0.00 0.00 36.77 4.61
464 465 7.649306 GGAGGAATATTTTCATTCAATTCGGTG 59.351 37.037 0.00 0.00 36.77 4.94
465 466 7.201911 GGGAGGAATATTTTCATTCAATTCGGT 60.202 37.037 0.00 0.00 36.77 4.69
466 467 7.147976 GGGAGGAATATTTTCATTCAATTCGG 58.852 38.462 0.00 0.00 36.77 4.30
467 468 6.857964 CGGGAGGAATATTTTCATTCAATTCG 59.142 38.462 0.00 0.00 36.77 3.34
494 495 1.938577 CATCGATCTGTTGGCTGGAAG 59.061 52.381 0.00 0.00 0.00 3.46
495 496 1.407299 CCATCGATCTGTTGGCTGGAA 60.407 52.381 0.00 0.00 30.91 3.53
496 497 0.178767 CCATCGATCTGTTGGCTGGA 59.821 55.000 0.00 0.00 30.91 3.86
497 498 0.178767 TCCATCGATCTGTTGGCTGG 59.821 55.000 0.00 0.00 37.36 4.85
498 499 1.134580 ACTCCATCGATCTGTTGGCTG 60.135 52.381 0.00 0.00 37.36 4.85
499 500 1.198713 ACTCCATCGATCTGTTGGCT 58.801 50.000 0.00 0.00 37.36 4.75
500 501 2.101582 ACTACTCCATCGATCTGTTGGC 59.898 50.000 0.00 0.00 37.36 4.52
501 502 4.022762 CCTACTACTCCATCGATCTGTTGG 60.023 50.000 0.00 0.00 38.58 3.77
502 503 4.822350 TCCTACTACTCCATCGATCTGTTG 59.178 45.833 0.00 0.00 0.00 3.33
503 504 5.050126 TCCTACTACTCCATCGATCTGTT 57.950 43.478 0.00 0.00 0.00 3.16
504 505 4.708576 TCCTACTACTCCATCGATCTGT 57.291 45.455 0.00 0.00 0.00 3.41
505 506 5.309638 TCTTCCTACTACTCCATCGATCTG 58.690 45.833 0.00 0.00 0.00 2.90
506 507 5.072600 ACTCTTCCTACTACTCCATCGATCT 59.927 44.000 0.00 0.00 0.00 2.75
507 508 5.310451 ACTCTTCCTACTACTCCATCGATC 58.690 45.833 0.00 0.00 0.00 3.69
508 509 5.313280 ACTCTTCCTACTACTCCATCGAT 57.687 43.478 0.00 0.00 0.00 3.59
509 510 4.774660 ACTCTTCCTACTACTCCATCGA 57.225 45.455 0.00 0.00 0.00 3.59
510 511 6.939132 TTAACTCTTCCTACTACTCCATCG 57.061 41.667 0.00 0.00 0.00 3.84
511 512 8.795513 GGTATTAACTCTTCCTACTACTCCATC 58.204 40.741 0.00 0.00 0.00 3.51
512 513 8.287350 TGGTATTAACTCTTCCTACTACTCCAT 58.713 37.037 0.00 0.00 0.00 3.41
513 514 7.559170 GTGGTATTAACTCTTCCTACTACTCCA 59.441 40.741 0.00 0.00 0.00 3.86
514 515 7.559170 TGTGGTATTAACTCTTCCTACTACTCC 59.441 40.741 0.00 0.00 0.00 3.85
515 516 8.517062 TGTGGTATTAACTCTTCCTACTACTC 57.483 38.462 0.00 0.00 0.00 2.59
516 517 8.890410 TTGTGGTATTAACTCTTCCTACTACT 57.110 34.615 0.00 0.00 0.00 2.57
519 520 8.603304 ACAATTGTGGTATTAACTCTTCCTACT 58.397 33.333 11.07 0.00 0.00 2.57
520 521 8.788325 ACAATTGTGGTATTAACTCTTCCTAC 57.212 34.615 11.07 0.00 0.00 3.18
521 522 9.880157 GTACAATTGTGGTATTAACTCTTCCTA 57.120 33.333 21.42 0.00 0.00 2.94
522 523 8.380099 TGTACAATTGTGGTATTAACTCTTCCT 58.620 33.333 21.42 0.00 0.00 3.36
523 524 8.556213 TGTACAATTGTGGTATTAACTCTTCC 57.444 34.615 21.42 0.00 0.00 3.46
549 551 5.701224 TCTGTTCTCACCCCTACAAATTTT 58.299 37.500 0.00 0.00 0.00 1.82
553 555 4.349636 TCAATCTGTTCTCACCCCTACAAA 59.650 41.667 0.00 0.00 0.00 2.83
603 607 4.554683 ACATAGGTAGAGTTTAGGGACCC 58.445 47.826 0.59 0.59 0.00 4.46
702 729 4.021925 GAGGGGTTGCAGGAGCGT 62.022 66.667 0.00 0.00 46.23 5.07
732 759 3.975312 TCGGGGCTAGGGATTTGTAAATA 59.025 43.478 0.00 0.00 0.00 1.40
756 783 1.040339 GCGGAGTGGACAGAGAGGAT 61.040 60.000 0.00 0.00 0.00 3.24
790 884 4.074526 GAGAGGACAGCGCTGGCA 62.075 66.667 41.77 0.00 41.42 4.92
840 934 6.183360 GCTCCCTCCATTATGAAGATATCGAT 60.183 42.308 2.16 2.16 0.00 3.59
845 939 4.533707 CCTGCTCCCTCCATTATGAAGATA 59.466 45.833 0.00 0.00 0.00 1.98
853 947 1.578703 TCCTACCTGCTCCCTCCATTA 59.421 52.381 0.00 0.00 0.00 1.90
854 948 0.343372 TCCTACCTGCTCCCTCCATT 59.657 55.000 0.00 0.00 0.00 3.16
983 1083 2.404186 ATGTAGCGCACCTCGTCGA 61.404 57.895 11.47 0.00 41.07 4.20
986 1086 1.676678 ATCCATGTAGCGCACCTCGT 61.677 55.000 11.47 0.00 41.07 4.18
1134 1331 9.398921 AGTATTTCAGTCCCCTAGAATCATATT 57.601 33.333 0.00 0.00 0.00 1.28
1143 1340 3.069729 CCGGAAGTATTTCAGTCCCCTAG 59.930 52.174 0.00 0.00 34.90 3.02
1208 1405 3.127548 GTCACTAGTGTCAATGCCATTGG 59.872 47.826 21.99 0.00 40.61 3.16
1295 1560 5.071788 ACCTCAACAGGACAGACAAGAAATA 59.928 40.000 0.00 0.00 43.65 1.40
1455 1795 0.893270 TGCCATTCTTTGTCCACCCG 60.893 55.000 0.00 0.00 0.00 5.28
1475 1845 1.003573 CACCTTCCTAGGCCTCCCT 59.996 63.158 9.68 0.00 46.22 4.20
1581 2697 1.607628 GTGCTTCATGATCATGGCCTC 59.392 52.381 30.54 19.05 39.24 4.70
1673 2961 6.791867 ATCACTAGAGCTACAACACCATTA 57.208 37.500 0.00 0.00 0.00 1.90
1674 2962 5.683876 ATCACTAGAGCTACAACACCATT 57.316 39.130 0.00 0.00 0.00 3.16
1752 3260 6.823689 ACAAGTAGCACCTGATAACAAATAGG 59.176 38.462 0.00 0.00 36.39 2.57
1954 3769 1.953559 TCAATCTACTTCATGCCGGC 58.046 50.000 22.73 22.73 0.00 6.13
1958 3773 7.695618 GTCTGTCAAATTCAATCTACTTCATGC 59.304 37.037 0.00 0.00 0.00 4.06
1999 3815 1.879380 TGTGCTTGCGCTTATTCAGTT 59.121 42.857 9.73 0.00 36.97 3.16
2000 3816 1.197721 GTGTGCTTGCGCTTATTCAGT 59.802 47.619 9.73 0.00 36.97 3.41
2007 3823 2.026590 GCTTGTGTGCTTGCGCTT 59.973 55.556 9.73 0.00 36.97 4.68
2059 3875 4.447290 TGTGCTAAAGCTTGTAGTGTCAA 58.553 39.130 0.00 0.00 42.66 3.18
2060 3876 4.066646 TGTGCTAAAGCTTGTAGTGTCA 57.933 40.909 0.00 3.48 42.66 3.58
2061 3877 5.023551 CTTGTGCTAAAGCTTGTAGTGTC 57.976 43.478 0.00 1.27 42.66 3.67
2147 4977 5.746284 TGATATTGTCAATCAAACCGGGTA 58.254 37.500 6.32 0.00 39.62 3.69
2166 5022 4.870123 AGCAAATGTGTGCCTTTTGATA 57.130 36.364 0.00 0.00 46.14 2.15
2236 5102 2.752030 CCTGAACAGGTGGATCCTCTA 58.248 52.381 14.23 0.00 46.24 2.43
2341 5244 1.006825 CGTTGAACATCGTCCGCTGA 61.007 55.000 0.00 0.00 0.00 4.26
2397 5300 3.878103 GGTATACTTCGAGAGCACTGAGA 59.122 47.826 2.25 0.00 0.00 3.27
2401 5304 3.300239 AGGGTATACTTCGAGAGCACT 57.700 47.619 2.25 0.00 0.00 4.40
2499 5582 6.414732 CCTTCCAAAACCTTTCCTTTCTTTT 58.585 36.000 0.00 0.00 0.00 2.27
2557 5640 1.926489 AAGTCCATACCCCCGGCAA 60.926 57.895 0.00 0.00 0.00 4.52
2560 5643 0.981277 AGACAAGTCCATACCCCCGG 60.981 60.000 0.00 0.00 0.00 5.73
2581 5664 3.146066 ACCTCACGCTTTAGCAATTTCA 58.854 40.909 2.29 0.00 42.21 2.69
2609 5693 2.595386 GGCCTGAAGCATGTTTTTACG 58.405 47.619 0.00 0.00 46.50 3.18
2670 5754 6.102663 TGTTGTAACAAAATCACCCAAACAG 58.897 36.000 0.00 0.00 35.67 3.16
2671 5755 6.037786 TGTTGTAACAAAATCACCCAAACA 57.962 33.333 0.00 0.00 35.67 2.83


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.