Multiple sequence alignment - TraesCS7B01G325500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G325500 chr7B 100.000 4729 0 0 1 4729 578192880 578197608 0.000000e+00 8733
1 TraesCS7B01G325500 chr7A 89.726 2151 131 50 104 2216 617581156 617579058 0.000000e+00 2665
2 TraesCS7B01G325500 chr7A 86.950 1862 143 47 2742 4529 617578677 617576842 0.000000e+00 2001
3 TraesCS7B01G325500 chr7A 92.435 423 21 4 2334 2748 617579050 617578631 1.130000e-165 593
4 TraesCS7B01G325500 chr7A 84.340 447 45 11 202 635 617581872 617581438 9.470000e-112 414
5 TraesCS7B01G325500 chr7A 90.230 174 15 2 1 172 617582039 617581866 4.760000e-55 226
6 TraesCS7B01G325500 chr7A 82.927 164 16 6 522 674 617583918 617584080 2.300000e-28 137
7 TraesCS7B01G325500 chr7D 93.741 1470 38 24 781 2216 535838514 535839963 0.000000e+00 2156
8 TraesCS7B01G325500 chr7D 91.058 1163 71 14 2318 3452 535839964 535841121 0.000000e+00 1541
9 TraesCS7B01G325500 chr7D 88.071 788 44 22 3450 4192 535841154 535841936 0.000000e+00 889
10 TraesCS7B01G325500 chr7D 83.715 743 90 15 1 726 535837786 535838514 0.000000e+00 673
11 TraesCS7B01G325500 chr7D 90.759 303 12 8 4239 4530 535841933 535842230 1.600000e-104 390
12 TraesCS7B01G325500 chr4B 95.122 123 5 1 2214 2335 449123570 449123692 4.830000e-45 193
13 TraesCS7B01G325500 chr4B 97.248 109 3 0 2215 2323 650659912 650660020 8.080000e-43 185
14 TraesCS7B01G325500 chr3B 94.309 123 7 0 2211 2333 178397280 178397158 6.250000e-44 189
15 TraesCS7B01G325500 chr3B 95.652 115 5 0 2215 2329 40198620 40198734 8.080000e-43 185
16 TraesCS7B01G325500 chr3B 93.388 121 7 1 2206 2325 217773159 217773279 1.350000e-40 178
17 TraesCS7B01G325500 chr3B 95.495 111 5 0 2215 2325 561436953 561436843 1.350000e-40 178
18 TraesCS7B01G325500 chr3D 95.652 115 5 0 2214 2328 435646850 435646736 8.080000e-43 185
19 TraesCS7B01G325500 chr3A 93.162 117 8 0 2213 2329 673617349 673617465 6.290000e-39 172
20 TraesCS7B01G325500 chr5A 91.870 123 9 1 2215 2337 528581386 528581265 2.260000e-38 171


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G325500 chr7B 578192880 578197608 4728 False 8733.0 8733 100.0000 1 4729 1 chr7B.!!$F1 4728
1 TraesCS7B01G325500 chr7A 617576842 617582039 5197 True 1179.8 2665 88.7362 1 4529 5 chr7A.!!$R1 4528
2 TraesCS7B01G325500 chr7D 535837786 535842230 4444 False 1129.8 2156 89.4688 1 4530 5 chr7D.!!$F1 4529

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
92 94 0.108615 AGCTACGCTCAGTTCGCAAT 60.109 50.0 0.00 0.00 30.62 3.56 F
774 1657 0.457853 ATGACGACGATCAACACGGG 60.458 55.0 0.00 0.00 34.93 5.28 F
779 1662 0.458025 GACGATCAACACGGGACCTC 60.458 60.0 0.00 0.00 34.93 3.85 F
1414 2381 0.605589 CGCATCTAGGCCTAGGAAGG 59.394 60.0 34.43 21.41 46.76 3.46 F
3030 4045 0.322187 ACTGGTTGTACCCATTCGCC 60.322 55.0 0.00 0.00 37.50 5.54 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1454 2421 0.615331 GGCCATCACACAGGAAGAGA 59.385 55.000 0.00 0.00 0.00 3.10 R
2234 3202 1.000607 ACACTCATACGTGCGACAAGT 60.001 47.619 0.00 0.00 38.45 3.16 R
2235 3203 1.698165 ACACTCATACGTGCGACAAG 58.302 50.000 0.00 0.00 38.45 3.16 R
3126 4141 0.109723 TCTCCCCCTCAAAACAACGG 59.890 55.000 0.00 0.00 0.00 4.44 R
4570 5705 0.040336 TCGAGACGTCTGCACTTGTC 60.040 55.000 25.58 4.86 0.00 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 2.025898 GTTTGAAACTTCAACCCCGGA 58.974 47.619 0.73 0.00 45.99 5.14
66 68 0.895530 TCGGCCACAGAGAACCTAAG 59.104 55.000 2.24 0.00 0.00 2.18
92 94 0.108615 AGCTACGCTCAGTTCGCAAT 60.109 50.000 0.00 0.00 30.62 3.56
169 206 2.012673 GCTCAATAGGCAGGAGTTGTG 58.987 52.381 0.00 0.00 0.00 3.33
170 207 2.355108 GCTCAATAGGCAGGAGTTGTGA 60.355 50.000 0.00 0.00 0.00 3.58
171 208 3.869912 GCTCAATAGGCAGGAGTTGTGAA 60.870 47.826 0.00 0.00 0.00 3.18
172 209 4.326826 CTCAATAGGCAGGAGTTGTGAAA 58.673 43.478 0.00 0.00 0.00 2.69
173 210 4.724399 TCAATAGGCAGGAGTTGTGAAAA 58.276 39.130 0.00 0.00 0.00 2.29
174 211 5.324409 TCAATAGGCAGGAGTTGTGAAAAT 58.676 37.500 0.00 0.00 0.00 1.82
175 212 5.415701 TCAATAGGCAGGAGTTGTGAAAATC 59.584 40.000 0.00 0.00 0.00 2.17
176 213 3.228188 AGGCAGGAGTTGTGAAAATCA 57.772 42.857 0.00 0.00 0.00 2.57
177 214 3.771216 AGGCAGGAGTTGTGAAAATCAT 58.229 40.909 0.00 0.00 0.00 2.45
178 215 4.154942 AGGCAGGAGTTGTGAAAATCATT 58.845 39.130 0.00 0.00 0.00 2.57
179 216 4.590222 AGGCAGGAGTTGTGAAAATCATTT 59.410 37.500 0.00 0.00 0.00 2.32
180 217 5.070847 AGGCAGGAGTTGTGAAAATCATTTT 59.929 36.000 0.00 0.00 35.12 1.82
181 218 5.759763 GGCAGGAGTTGTGAAAATCATTTTT 59.240 36.000 0.00 0.00 37.75 1.94
194 231 8.716646 GAAAATCATTTTTCACCCCGAATAAT 57.283 30.769 0.00 0.00 46.55 1.28
195 232 8.491331 AAAATCATTTTTCACCCCGAATAATG 57.509 30.769 10.07 10.07 46.29 1.90
199 236 6.790232 ATTTTTCACCCCGAATAATGACAT 57.210 33.333 0.00 0.00 34.96 3.06
200 237 7.889873 ATTTTTCACCCCGAATAATGACATA 57.110 32.000 0.00 0.00 34.96 2.29
201 238 7.889873 TTTTTCACCCCGAATAATGACATAT 57.110 32.000 0.00 0.00 32.32 1.78
202 239 6.875948 TTTCACCCCGAATAATGACATATG 57.124 37.500 0.00 0.00 32.32 1.78
203 240 5.560722 TCACCCCGAATAATGACATATGT 57.439 39.130 8.43 8.43 0.00 2.29
204 241 5.935945 TCACCCCGAATAATGACATATGTT 58.064 37.500 10.30 0.00 0.00 2.71
235 272 2.817258 CGGTTCCCAACTAATTCAGCAA 59.183 45.455 0.00 0.00 0.00 3.91
255 292 1.822186 ACAACCCCGTGACAAGTGC 60.822 57.895 0.00 0.00 0.00 4.40
265 302 2.222796 CGTGACAAGTGCACCGAATATG 60.223 50.000 14.63 6.05 32.74 1.78
268 305 2.351726 GACAAGTGCACCGAATATGACC 59.648 50.000 14.63 0.00 0.00 4.02
328 365 4.023021 ACCAAAAACATGCAATTTGATGGC 60.023 37.500 20.58 0.00 36.41 4.40
332 369 1.820519 ACATGCAATTTGATGGCGACT 59.179 42.857 0.00 0.00 0.00 4.18
333 370 2.190161 CATGCAATTTGATGGCGACTG 58.810 47.619 0.00 0.00 0.00 3.51
349 386 3.197265 CGACTGCATGTCAATCACCATA 58.803 45.455 14.09 0.00 45.60 2.74
351 388 4.274214 CGACTGCATGTCAATCACCATAAT 59.726 41.667 14.09 0.00 45.60 1.28
352 389 5.466393 CGACTGCATGTCAATCACCATAATA 59.534 40.000 14.09 0.00 45.60 0.98
353 390 6.018016 CGACTGCATGTCAATCACCATAATAA 60.018 38.462 14.09 0.00 45.60 1.40
354 391 7.268199 ACTGCATGTCAATCACCATAATAAG 57.732 36.000 0.00 0.00 0.00 1.73
356 393 5.009911 TGCATGTCAATCACCATAATAAGCC 59.990 40.000 0.00 0.00 0.00 4.35
361 398 4.665009 TCAATCACCATAATAAGCCCCTCT 59.335 41.667 0.00 0.00 0.00 3.69
362 399 5.849475 TCAATCACCATAATAAGCCCCTCTA 59.151 40.000 0.00 0.00 0.00 2.43
363 400 5.763876 ATCACCATAATAAGCCCCTCTAC 57.236 43.478 0.00 0.00 0.00 2.59
364 401 4.562767 TCACCATAATAAGCCCCTCTACA 58.437 43.478 0.00 0.00 0.00 2.74
371 408 2.474410 AAGCCCCTCTACACGAAAAG 57.526 50.000 0.00 0.00 0.00 2.27
376 413 3.306571 GCCCCTCTACACGAAAAGTAACT 60.307 47.826 0.00 0.00 0.00 2.24
384 421 4.751060 ACACGAAAAGTAACTCACTGTCA 58.249 39.130 0.00 0.00 37.63 3.58
410 447 0.842635 AATCTCCACCAGCCCATCTC 59.157 55.000 0.00 0.00 0.00 2.75
413 450 1.612146 TCCACCAGCCCATCTCGAA 60.612 57.895 0.00 0.00 0.00 3.71
460 497 2.358898 CGTATGCTGCCTTTTTATGCCT 59.641 45.455 0.00 0.00 0.00 4.75
465 502 2.493278 GCTGCCTTTTTATGCCTCTTCA 59.507 45.455 0.00 0.00 0.00 3.02
482 519 0.916086 TCACCACTTGTGGTTGGAGT 59.084 50.000 21.41 0.00 45.48 3.85
483 520 2.120312 TCACCACTTGTGGTTGGAGTA 58.880 47.619 21.41 2.54 45.48 2.59
484 521 2.506231 TCACCACTTGTGGTTGGAGTAA 59.494 45.455 21.41 1.02 45.48 2.24
485 522 3.137544 TCACCACTTGTGGTTGGAGTAAT 59.862 43.478 21.41 0.00 45.48 1.89
486 523 3.253188 CACCACTTGTGGTTGGAGTAATG 59.747 47.826 21.41 5.01 40.85 1.90
487 524 3.117663 ACCACTTGTGGTTGGAGTAATGT 60.118 43.478 18.69 0.00 39.57 2.71
488 525 3.253188 CCACTTGTGGTTGGAGTAATGTG 59.747 47.826 11.39 0.00 0.00 3.21
489 526 2.884639 ACTTGTGGTTGGAGTAATGTGC 59.115 45.455 0.00 0.00 0.00 4.57
490 527 1.904287 TGTGGTTGGAGTAATGTGCC 58.096 50.000 0.00 0.00 0.00 5.01
491 528 0.802494 GTGGTTGGAGTAATGTGCCG 59.198 55.000 0.00 0.00 0.00 5.69
492 529 0.958382 TGGTTGGAGTAATGTGCCGC 60.958 55.000 0.00 0.00 0.00 6.53
493 530 0.676782 GGTTGGAGTAATGTGCCGCT 60.677 55.000 0.00 0.00 0.00 5.52
494 531 0.727398 GTTGGAGTAATGTGCCGCTC 59.273 55.000 0.00 0.00 0.00 5.03
495 532 0.613260 TTGGAGTAATGTGCCGCTCT 59.387 50.000 0.00 0.00 0.00 4.09
512 551 4.177026 CGCTCTAGTCATGCTTTTGTAGT 58.823 43.478 0.00 0.00 0.00 2.73
513 552 4.266502 CGCTCTAGTCATGCTTTTGTAGTC 59.733 45.833 0.00 0.00 0.00 2.59
515 554 5.814705 GCTCTAGTCATGCTTTTGTAGTCAT 59.185 40.000 0.00 0.00 0.00 3.06
516 555 6.238049 GCTCTAGTCATGCTTTTGTAGTCATG 60.238 42.308 0.00 0.00 38.57 3.07
517 556 6.108687 TCTAGTCATGCTTTTGTAGTCATGG 58.891 40.000 0.00 0.00 38.16 3.66
518 557 4.655963 AGTCATGCTTTTGTAGTCATGGT 58.344 39.130 0.00 0.00 38.16 3.55
519 558 5.804639 AGTCATGCTTTTGTAGTCATGGTA 58.195 37.500 0.00 0.00 38.16 3.25
520 559 6.418101 AGTCATGCTTTTGTAGTCATGGTAT 58.582 36.000 0.00 0.00 38.16 2.73
521 560 6.317140 AGTCATGCTTTTGTAGTCATGGTATG 59.683 38.462 0.00 0.00 38.16 2.39
522 561 5.589855 TCATGCTTTTGTAGTCATGGTATGG 59.410 40.000 0.00 0.00 38.16 2.74
523 562 3.694072 TGCTTTTGTAGTCATGGTATGGC 59.306 43.478 0.00 0.00 34.38 4.40
528 567 4.568072 TGTAGTCATGGTATGGCTGTTT 57.432 40.909 6.20 0.00 46.32 2.83
544 583 4.746611 GGCTGTTTTCATGCTTTATATGCC 59.253 41.667 0.00 0.00 0.00 4.40
549 588 2.068519 TCATGCTTTATATGCCGCTCG 58.931 47.619 0.00 0.00 0.00 5.03
551 590 0.602638 TGCTTTATATGCCGCTCGGG 60.603 55.000 10.57 0.00 39.58 5.14
561 600 1.227263 CCGCTCGGGGTTGTATCTG 60.227 63.158 0.00 0.00 0.00 2.90
591 641 3.412386 GCACTTCCTCTAAGCCTTTTCA 58.588 45.455 0.00 0.00 38.93 2.69
603 653 4.322057 AGCCTTTTCATGGTGTATCCTT 57.678 40.909 0.00 0.00 37.07 3.36
632 682 5.945144 AATGCTGCCTTTTTATGGAAGAT 57.055 34.783 0.00 0.00 31.78 2.40
668 1551 5.856455 CGTATCAAAGTCAAATTTGTCCCAC 59.144 40.000 17.47 8.63 40.36 4.61
669 1552 5.867903 ATCAAAGTCAAATTTGTCCCACA 57.132 34.783 17.47 0.79 40.36 4.17
734 1617 8.017418 TCTTTTGAAAATTGTTACATGGAGGT 57.983 30.769 0.00 0.00 0.00 3.85
735 1618 8.482128 TCTTTTGAAAATTGTTACATGGAGGTT 58.518 29.630 0.00 0.00 0.00 3.50
736 1619 9.757227 CTTTTGAAAATTGTTACATGGAGGTTA 57.243 29.630 0.00 0.00 0.00 2.85
752 1635 9.586435 CATGGAGGTTAAAATGTAAAAATCTCC 57.414 33.333 6.32 6.32 37.97 3.71
753 1636 8.713708 TGGAGGTTAAAATGTAAAAATCTCCA 57.286 30.769 11.00 11.00 42.98 3.86
754 1637 8.581578 TGGAGGTTAAAATGTAAAAATCTCCAC 58.418 33.333 11.00 0.00 41.14 4.02
755 1638 8.581578 GGAGGTTAAAATGTAAAAATCTCCACA 58.418 33.333 8.07 0.00 37.56 4.17
757 1640 9.927668 AGGTTAAAATGTAAAAATCTCCACATG 57.072 29.630 0.00 0.00 32.15 3.21
758 1641 9.921637 GGTTAAAATGTAAAAATCTCCACATGA 57.078 29.630 0.00 0.00 32.15 3.07
760 1643 9.619316 TTAAAATGTAAAAATCTCCACATGACG 57.381 29.630 0.00 0.00 32.15 4.35
761 1644 7.447374 AAATGTAAAAATCTCCACATGACGA 57.553 32.000 0.00 0.00 32.15 4.20
762 1645 5.856126 TGTAAAAATCTCCACATGACGAC 57.144 39.130 0.00 0.00 0.00 4.34
763 1646 4.387559 TGTAAAAATCTCCACATGACGACG 59.612 41.667 0.00 0.00 0.00 5.12
764 1647 3.313012 AAAATCTCCACATGACGACGA 57.687 42.857 0.00 0.00 0.00 4.20
765 1648 3.526931 AAATCTCCACATGACGACGAT 57.473 42.857 0.00 0.00 0.00 3.73
766 1649 2.783828 ATCTCCACATGACGACGATC 57.216 50.000 0.00 0.00 0.00 3.69
767 1650 1.459450 TCTCCACATGACGACGATCA 58.541 50.000 0.00 1.94 0.00 2.92
768 1651 1.816224 TCTCCACATGACGACGATCAA 59.184 47.619 0.00 0.00 30.82 2.57
769 1652 1.920574 CTCCACATGACGACGATCAAC 59.079 52.381 0.00 0.00 30.82 3.18
770 1653 1.271102 TCCACATGACGACGATCAACA 59.729 47.619 0.00 0.00 30.82 3.33
771 1654 1.390123 CCACATGACGACGATCAACAC 59.610 52.381 0.00 0.00 30.82 3.32
772 1655 1.057706 CACATGACGACGATCAACACG 59.942 52.381 0.00 0.00 30.82 4.49
773 1656 0.640262 CATGACGACGATCAACACGG 59.360 55.000 0.00 0.00 34.93 4.94
774 1657 0.457853 ATGACGACGATCAACACGGG 60.458 55.000 0.00 0.00 34.93 5.28
775 1658 1.210931 GACGACGATCAACACGGGA 59.789 57.895 0.00 0.00 34.93 5.14
776 1659 1.069378 GACGACGATCAACACGGGAC 61.069 60.000 0.00 0.00 34.93 4.46
777 1660 1.804326 CGACGATCAACACGGGACC 60.804 63.158 0.00 0.00 34.93 4.46
778 1661 1.590147 GACGATCAACACGGGACCT 59.410 57.895 0.00 0.00 34.93 3.85
779 1662 0.458025 GACGATCAACACGGGACCTC 60.458 60.000 0.00 0.00 34.93 3.85
854 1791 1.080501 CGGATCCCACATCGATCGG 60.081 63.158 16.41 2.12 37.58 4.18
1039 2006 3.119096 GCCGGAAGCAGGACGAAC 61.119 66.667 5.05 0.00 42.97 3.95
1117 2084 4.316823 TGGACCTCGACAGGGGCT 62.317 66.667 0.00 0.00 45.53 5.19
1414 2381 0.605589 CGCATCTAGGCCTAGGAAGG 59.394 60.000 34.43 21.41 46.76 3.46
1471 2439 3.969287 TCTTCTCTTCCTGTGTGATGG 57.031 47.619 0.00 0.00 0.00 3.51
1938 2906 1.595382 GATGGAGATGGGTTCGGCG 60.595 63.158 0.00 0.00 0.00 6.46
2019 2987 4.699522 GTTGGCTCGGCGAGGGTT 62.700 66.667 35.03 0.00 0.00 4.11
2125 3093 3.629398 GGGCTCAAATTACTCCTGACATG 59.371 47.826 0.00 0.00 0.00 3.21
2135 3103 8.723942 AATTACTCCTGACATGTTCTTCATAC 57.276 34.615 0.00 0.00 34.67 2.39
2143 3111 6.764379 TGACATGTTCTTCATACCAGTGTTA 58.236 36.000 0.00 0.00 34.67 2.41
2210 3178 3.485877 GGCATGAACTCGATGCTACAAAC 60.486 47.826 7.79 0.00 44.75 2.93
2211 3179 3.372206 GCATGAACTCGATGCTACAAACT 59.628 43.478 0.00 0.00 42.52 2.66
2213 3181 5.063438 GCATGAACTCGATGCTACAAACTTA 59.937 40.000 0.00 0.00 42.52 2.24
2214 3182 6.238211 GCATGAACTCGATGCTACAAACTTAT 60.238 38.462 0.00 0.00 42.52 1.73
2215 3183 7.042725 GCATGAACTCGATGCTACAAACTTATA 60.043 37.037 0.00 0.00 42.52 0.98
2216 3184 7.751047 TGAACTCGATGCTACAAACTTATAC 57.249 36.000 0.00 0.00 0.00 1.47
2218 3186 7.701078 TGAACTCGATGCTACAAACTTATACTC 59.299 37.037 0.00 0.00 0.00 2.59
2219 3187 6.505272 ACTCGATGCTACAAACTTATACTCC 58.495 40.000 0.00 0.00 0.00 3.85
2220 3188 5.839621 TCGATGCTACAAACTTATACTCCC 58.160 41.667 0.00 0.00 0.00 4.30
2221 3189 5.597182 TCGATGCTACAAACTTATACTCCCT 59.403 40.000 0.00 0.00 0.00 4.20
2222 3190 5.921408 CGATGCTACAAACTTATACTCCCTC 59.079 44.000 0.00 0.00 0.00 4.30
2223 3191 5.609533 TGCTACAAACTTATACTCCCTCC 57.390 43.478 0.00 0.00 0.00 4.30
2224 3192 4.098960 TGCTACAAACTTATACTCCCTCCG 59.901 45.833 0.00 0.00 0.00 4.63
2225 3193 4.099113 GCTACAAACTTATACTCCCTCCGT 59.901 45.833 0.00 0.00 0.00 4.69
2226 3194 5.394993 GCTACAAACTTATACTCCCTCCGTT 60.395 44.000 0.00 0.00 0.00 4.44
2227 3195 5.082251 ACAAACTTATACTCCCTCCGTTC 57.918 43.478 0.00 0.00 0.00 3.95
2228 3196 4.081254 ACAAACTTATACTCCCTCCGTTCC 60.081 45.833 0.00 0.00 0.00 3.62
2229 3197 2.305009 ACTTATACTCCCTCCGTTCCG 58.695 52.381 0.00 0.00 0.00 4.30
2230 3198 2.092212 ACTTATACTCCCTCCGTTCCGA 60.092 50.000 0.00 0.00 0.00 4.55
2231 3199 2.734755 TATACTCCCTCCGTTCCGAA 57.265 50.000 0.00 0.00 0.00 4.30
2232 3200 2.083628 ATACTCCCTCCGTTCCGAAT 57.916 50.000 0.00 0.00 0.00 3.34
2233 3201 1.856629 TACTCCCTCCGTTCCGAATT 58.143 50.000 0.00 0.00 0.00 2.17
2234 3202 1.856629 ACTCCCTCCGTTCCGAATTA 58.143 50.000 0.00 0.00 0.00 1.40
2235 3203 1.479730 ACTCCCTCCGTTCCGAATTAC 59.520 52.381 0.00 0.00 0.00 1.89
2236 3204 1.755380 CTCCCTCCGTTCCGAATTACT 59.245 52.381 0.00 0.00 0.00 2.24
2237 3205 2.167900 CTCCCTCCGTTCCGAATTACTT 59.832 50.000 0.00 0.00 0.00 2.24
2238 3206 2.093869 TCCCTCCGTTCCGAATTACTTG 60.094 50.000 0.00 0.00 0.00 3.16
2239 3207 2.354403 CCCTCCGTTCCGAATTACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
2240 3208 2.928116 CCTCCGTTCCGAATTACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
2241 3209 2.597305 CTCCGTTCCGAATTACTTGTCG 59.403 50.000 0.00 0.00 37.01 4.35
2242 3210 1.060122 CCGTTCCGAATTACTTGTCGC 59.940 52.381 0.00 0.00 35.93 5.19
2243 3211 1.722464 CGTTCCGAATTACTTGTCGCA 59.278 47.619 0.00 0.00 35.93 5.10
2244 3212 2.471749 CGTTCCGAATTACTTGTCGCAC 60.472 50.000 0.00 0.00 35.93 5.34
2245 3213 1.342555 TCCGAATTACTTGTCGCACG 58.657 50.000 0.00 0.00 35.93 5.34
2246 3214 1.065358 CCGAATTACTTGTCGCACGT 58.935 50.000 0.00 0.00 35.93 4.49
2247 3215 2.095314 TCCGAATTACTTGTCGCACGTA 60.095 45.455 0.00 0.00 35.93 3.57
2248 3216 2.855963 CCGAATTACTTGTCGCACGTAT 59.144 45.455 0.00 0.00 35.93 3.06
2249 3217 3.301579 CCGAATTACTTGTCGCACGTATG 60.302 47.826 0.00 0.00 35.93 2.39
2250 3218 3.544682 CGAATTACTTGTCGCACGTATGA 59.455 43.478 0.00 0.00 0.00 2.15
2251 3219 4.316446 CGAATTACTTGTCGCACGTATGAG 60.316 45.833 0.00 0.00 0.00 2.90
2252 3220 3.564235 TTACTTGTCGCACGTATGAGT 57.436 42.857 0.00 0.00 0.00 3.41
2253 3221 1.698165 ACTTGTCGCACGTATGAGTG 58.302 50.000 0.00 0.00 44.47 3.51
2254 3222 1.000607 ACTTGTCGCACGTATGAGTGT 60.001 47.619 0.00 0.00 43.61 3.55
2255 3223 2.227149 ACTTGTCGCACGTATGAGTGTA 59.773 45.455 0.00 0.00 43.61 2.90
2256 3224 3.119602 ACTTGTCGCACGTATGAGTGTAT 60.120 43.478 0.00 0.00 43.61 2.29
2257 3225 3.060978 TGTCGCACGTATGAGTGTATC 57.939 47.619 0.00 0.00 43.61 2.24
2258 3226 2.681344 TGTCGCACGTATGAGTGTATCT 59.319 45.455 0.00 0.00 43.61 1.98
2259 3227 3.872771 TGTCGCACGTATGAGTGTATCTA 59.127 43.478 0.00 0.00 43.61 1.98
2260 3228 4.025145 TGTCGCACGTATGAGTGTATCTAG 60.025 45.833 0.00 0.00 43.61 2.43
2261 3229 4.210746 GTCGCACGTATGAGTGTATCTAGA 59.789 45.833 0.00 0.00 43.61 2.43
2262 3230 4.995487 TCGCACGTATGAGTGTATCTAGAT 59.005 41.667 10.73 10.73 43.61 1.98
2263 3231 5.082723 CGCACGTATGAGTGTATCTAGATG 58.917 45.833 15.79 0.00 43.61 2.90
2264 3232 5.334182 CGCACGTATGAGTGTATCTAGATGT 60.334 44.000 15.79 0.00 43.61 3.06
2265 3233 6.128634 CGCACGTATGAGTGTATCTAGATGTA 60.129 42.308 15.79 1.12 43.61 2.29
2266 3234 7.413109 CGCACGTATGAGTGTATCTAGATGTAT 60.413 40.741 15.79 0.00 43.61 2.29
2267 3235 8.237949 GCACGTATGAGTGTATCTAGATGTATT 58.762 37.037 15.79 0.91 43.61 1.89
2268 3236 9.548208 CACGTATGAGTGTATCTAGATGTATTG 57.452 37.037 15.79 0.00 37.35 1.90
2269 3237 9.286170 ACGTATGAGTGTATCTAGATGTATTGT 57.714 33.333 15.79 0.00 0.00 2.71
2293 3261 8.144478 TGTAGTTCTAGATACATCCATTTCAGC 58.856 37.037 2.64 0.00 0.00 4.26
2294 3262 6.219473 AGTTCTAGATACATCCATTTCAGCG 58.781 40.000 0.00 0.00 0.00 5.18
2295 3263 6.040955 AGTTCTAGATACATCCATTTCAGCGA 59.959 38.462 0.00 0.00 0.00 4.93
2296 3264 6.596309 TCTAGATACATCCATTTCAGCGAT 57.404 37.500 0.00 0.00 0.00 4.58
2297 3265 6.393171 TCTAGATACATCCATTTCAGCGATG 58.607 40.000 0.00 0.00 39.44 3.84
2298 3266 5.219343 AGATACATCCATTTCAGCGATGA 57.781 39.130 0.00 0.00 37.44 2.92
2299 3267 5.236282 AGATACATCCATTTCAGCGATGAG 58.764 41.667 2.57 0.00 37.44 2.90
2300 3268 3.272574 ACATCCATTTCAGCGATGAGT 57.727 42.857 2.57 0.00 37.44 3.41
2301 3269 4.406648 ACATCCATTTCAGCGATGAGTA 57.593 40.909 2.57 0.00 37.44 2.59
2302 3270 4.769688 ACATCCATTTCAGCGATGAGTAA 58.230 39.130 2.57 0.00 37.44 2.24
2303 3271 5.371526 ACATCCATTTCAGCGATGAGTAAT 58.628 37.500 2.57 0.00 37.44 1.89
2304 3272 5.824624 ACATCCATTTCAGCGATGAGTAATT 59.175 36.000 2.57 0.00 37.44 1.40
2305 3273 6.319658 ACATCCATTTCAGCGATGAGTAATTT 59.680 34.615 2.57 0.00 37.44 1.82
2306 3274 6.122850 TCCATTTCAGCGATGAGTAATTTG 57.877 37.500 2.57 0.00 0.00 2.32
2307 3275 5.066375 TCCATTTCAGCGATGAGTAATTTGG 59.934 40.000 2.57 2.61 0.00 3.28
2308 3276 5.066375 CCATTTCAGCGATGAGTAATTTGGA 59.934 40.000 2.57 0.00 0.00 3.53
2309 3277 6.404623 CCATTTCAGCGATGAGTAATTTGGAA 60.405 38.462 2.57 0.00 0.00 3.53
2310 3278 5.545658 TTCAGCGATGAGTAATTTGGAAC 57.454 39.130 2.57 0.00 0.00 3.62
2311 3279 3.616821 TCAGCGATGAGTAATTTGGAACG 59.383 43.478 0.00 0.00 0.00 3.95
2312 3280 2.936498 AGCGATGAGTAATTTGGAACGG 59.064 45.455 0.00 0.00 0.00 4.44
2313 3281 2.933906 GCGATGAGTAATTTGGAACGGA 59.066 45.455 0.00 0.00 0.00 4.69
2314 3282 3.001330 GCGATGAGTAATTTGGAACGGAG 59.999 47.826 0.00 0.00 0.00 4.63
2315 3283 3.555956 CGATGAGTAATTTGGAACGGAGG 59.444 47.826 0.00 0.00 0.00 4.30
2316 3284 3.343941 TGAGTAATTTGGAACGGAGGG 57.656 47.619 0.00 0.00 0.00 4.30
2330 3298 7.061054 TGGAACGGAGGGAGTATATGATATAG 58.939 42.308 0.00 0.00 0.00 1.31
2408 3379 4.824479 TGATTCTGTCAGTTATGGCTGA 57.176 40.909 0.00 0.00 42.56 4.26
2449 3421 3.690475 ACAACAGCATGAGAGTGATGA 57.310 42.857 0.00 0.00 39.69 2.92
2621 3597 2.205074 GGAATATGTGGACTGTGCTCG 58.795 52.381 0.00 0.00 0.00 5.03
2693 3669 7.969690 TCAGGAGGCAATTCCAATTATTTAA 57.030 32.000 4.27 0.00 39.84 1.52
2694 3670 8.551682 TCAGGAGGCAATTCCAATTATTTAAT 57.448 30.769 4.27 0.00 39.84 1.40
2695 3671 8.423349 TCAGGAGGCAATTCCAATTATTTAATG 58.577 33.333 4.27 0.00 39.84 1.90
2732 3716 3.145087 TGGGATATGGGGTGATGGTACTA 59.855 47.826 0.00 0.00 0.00 1.82
2740 3724 3.606687 GGGTGATGGTACTAACAGTTGG 58.393 50.000 0.00 0.00 0.00 3.77
2779 3763 5.012458 GGGGTGAAGGTACTACTAACAGTTT 59.988 44.000 0.00 0.00 38.49 2.66
2822 3806 3.145286 GGAGCTTAGGATCTTCAATGGC 58.855 50.000 0.00 0.00 0.00 4.40
2832 3816 3.507162 TCTTCAATGGCCTCAACTTCA 57.493 42.857 3.32 0.00 0.00 3.02
2850 3834 4.638865 ACTTCAACGATTTTATAGGTGCCC 59.361 41.667 0.00 0.00 0.00 5.36
2852 3836 2.249844 ACGATTTTATAGGTGCCCGG 57.750 50.000 0.00 0.00 0.00 5.73
2880 3895 4.389687 GGCTTGCAGATGGTTTTACATTTG 59.610 41.667 0.00 0.00 36.39 2.32
3030 4045 0.322187 ACTGGTTGTACCCATTCGCC 60.322 55.000 0.00 0.00 37.50 5.54
3049 4064 1.176527 CGTCCAGTTTGGCCATGATT 58.823 50.000 6.09 0.00 37.47 2.57
3051 4066 2.170166 GTCCAGTTTGGCCATGATTCA 58.830 47.619 6.09 0.00 37.47 2.57
3067 4082 5.125100 TGATTCATGTCTTGGAAAAGCAC 57.875 39.130 0.00 0.00 0.00 4.40
3116 4131 1.163420 TTGCTCCTTTTCTTGCGCGA 61.163 50.000 12.10 0.00 0.00 5.87
3126 4141 0.999406 TCTTGCGCGATTAGCTGTTC 59.001 50.000 12.10 0.00 45.59 3.18
3141 4156 1.336755 CTGTTCCGTTGTTTTGAGGGG 59.663 52.381 0.00 0.00 0.00 4.79
3149 4164 0.107831 TGTTTTGAGGGGGAGACACG 59.892 55.000 0.00 0.00 0.00 4.49
3157 4172 2.436646 GGGAGACACGGGCATGTG 60.437 66.667 7.47 7.47 45.41 3.21
3163 4178 2.979676 CACGGGCATGTGTGTGCT 60.980 61.111 0.00 0.00 44.45 4.40
3215 4236 2.952310 CAGAAGCTATTTTAGGTGGGGC 59.048 50.000 0.00 0.00 36.50 5.80
3225 4246 4.864334 GGTGGGGCTGCCGATCAG 62.864 72.222 13.40 1.00 45.62 2.90
3226 4247 4.101448 GTGGGGCTGCCGATCAGT 62.101 66.667 13.40 0.00 44.66 3.41
3227 4248 3.329889 TGGGGCTGCCGATCAGTT 61.330 61.111 13.40 0.00 44.66 3.16
3305 4326 7.292713 TGGAGCGTATATAAATGGTGTTCTA 57.707 36.000 0.00 0.00 0.00 2.10
3373 4394 6.389906 ACTGTTTTAAGCAAGATAACATGGC 58.610 36.000 0.00 0.00 0.00 4.40
3377 4398 1.668419 AGCAAGATAACATGGCGTCC 58.332 50.000 0.00 0.00 0.00 4.79
3405 4429 1.132834 CGCAGCACTTTCATTGGCATA 59.867 47.619 0.00 0.00 0.00 3.14
3407 4431 2.925563 GCAGCACTTTCATTGGCATAAC 59.074 45.455 0.00 0.00 0.00 1.89
3456 4516 0.024238 CAGCGACGCAATTCGAGAAG 59.976 55.000 23.70 0.00 41.78 2.85
3463 4523 1.464608 CGCAATTCGAGAAGCTTGGAA 59.535 47.619 2.10 5.11 41.67 3.53
3464 4524 2.475187 CGCAATTCGAGAAGCTTGGAAG 60.475 50.000 2.10 0.00 41.67 3.46
3476 4536 1.956477 GCTTGGAAGTGTGGACATGTT 59.044 47.619 0.00 0.00 0.00 2.71
3477 4537 3.146066 GCTTGGAAGTGTGGACATGTTA 58.854 45.455 0.00 0.00 0.00 2.41
3519 4584 3.013921 ACTCGTTTCTTTTGCTTGGACA 58.986 40.909 0.00 0.00 0.00 4.02
3563 4628 5.348451 GCAAAGCCAATATGGTTACTTGTTG 59.652 40.000 0.00 0.00 40.46 3.33
3595 4660 6.778821 TGTCTGGGGTATAATACAATCCATG 58.221 40.000 0.00 0.00 0.00 3.66
3616 4681 7.279981 TCCATGAGAATTATAACCTTGTTGTCG 59.720 37.037 0.00 0.00 0.00 4.35
3658 4724 3.473625 ACCGGGTTTGTTAGAGAAACTG 58.526 45.455 6.32 0.00 38.99 3.16
3659 4725 3.118149 ACCGGGTTTGTTAGAGAAACTGT 60.118 43.478 6.32 0.00 38.99 3.55
3689 4755 8.641541 TGCTTTTAATTGAAGTTTTGAGGAGAT 58.358 29.630 0.00 0.00 0.00 2.75
3703 4769 9.185192 GTTTTGAGGAGATGAAAGTAACATTTG 57.815 33.333 0.00 0.00 0.00 2.32
3707 4773 7.604164 TGAGGAGATGAAAGTAACATTTGAGTC 59.396 37.037 0.00 0.00 0.00 3.36
3716 4784 8.608844 AAAGTAACATTTGAGTCTCTACCTTG 57.391 34.615 0.65 0.00 0.00 3.61
3732 4800 2.039879 ACCTTGTCAGGAAAATAGGCGT 59.960 45.455 0.00 0.00 44.19 5.68
3764 4835 4.758674 CAGAGGATGCTGTATAAACCATGG 59.241 45.833 11.19 11.19 0.00 3.66
4047 5158 4.926238 GCTATCATTTCCGTACATCTCTGG 59.074 45.833 0.00 0.00 0.00 3.86
4056 5167 3.179830 CGTACATCTCTGGAAAACCTCG 58.820 50.000 0.00 0.00 0.00 4.63
4077 5196 1.351350 CGTTTCTTTTCTCCCTCCCCT 59.649 52.381 0.00 0.00 0.00 4.79
4120 5244 3.645268 AATGGCCAGCGGAGGTTCC 62.645 63.158 13.05 0.00 33.74 3.62
4180 5307 1.271871 TGAACCATTTGGCGATCCACT 60.272 47.619 0.00 0.00 43.33 4.00
4181 5308 2.026729 TGAACCATTTGGCGATCCACTA 60.027 45.455 0.00 0.00 43.33 2.74
4182 5309 3.214328 GAACCATTTGGCGATCCACTAT 58.786 45.455 0.00 0.00 43.33 2.12
4197 5324 1.068474 ACTATCGCTGTTTCACGTGC 58.932 50.000 11.67 0.00 0.00 5.34
4216 5343 0.799917 CTGATCGTGCTCTGACGGTG 60.800 60.000 0.00 0.00 39.88 4.94
4217 5344 1.241315 TGATCGTGCTCTGACGGTGA 61.241 55.000 0.00 0.00 39.88 4.02
4220 5347 0.604511 TCGTGCTCTGACGGTGAGTA 60.605 55.000 0.00 0.00 39.88 2.59
4221 5348 0.179187 CGTGCTCTGACGGTGAGTAG 60.179 60.000 0.00 0.00 35.65 2.57
4225 5352 1.822506 CTCTGACGGTGAGTAGTGGA 58.177 55.000 0.00 0.00 0.00 4.02
4232 5359 1.339097 GGTGAGTAGTGGAGGTGTGT 58.661 55.000 0.00 0.00 0.00 3.72
4233 5360 1.692519 GGTGAGTAGTGGAGGTGTGTT 59.307 52.381 0.00 0.00 0.00 3.32
4241 5368 4.431416 AGTGGAGGTGTGTTGTCATTTA 57.569 40.909 0.00 0.00 0.00 1.40
4243 5370 4.761739 AGTGGAGGTGTGTTGTCATTTATG 59.238 41.667 0.00 0.00 0.00 1.90
4245 5372 3.119495 GGAGGTGTGTTGTCATTTATGCC 60.119 47.826 0.00 0.00 0.00 4.40
4290 5421 2.586648 TGGAAGAAAGGAAGGAAGGC 57.413 50.000 0.00 0.00 0.00 4.35
4319 5450 0.178975 AACATGGCGGGACAAGGAAA 60.179 50.000 0.00 0.00 0.00 3.13
4355 5489 2.575532 CTGTCTGTGCAAAGGAAGGAA 58.424 47.619 3.47 0.00 0.00 3.36
4416 5551 4.873129 CAGGCACGGCGAGCGTAT 62.873 66.667 22.68 9.12 0.00 3.06
4529 5664 3.967401 TGTCGACGTAATTGTTGTGAGA 58.033 40.909 11.62 0.00 0.00 3.27
4531 5666 4.804665 TGTCGACGTAATTGTTGTGAGAAA 59.195 37.500 11.62 0.00 0.00 2.52
4532 5667 5.464057 TGTCGACGTAATTGTTGTGAGAAAT 59.536 36.000 11.62 0.00 0.00 2.17
4533 5668 5.783654 GTCGACGTAATTGTTGTGAGAAATG 59.216 40.000 0.00 0.00 0.00 2.32
4534 5669 5.692654 TCGACGTAATTGTTGTGAGAAATGA 59.307 36.000 0.00 0.00 0.00 2.57
4535 5670 6.009474 CGACGTAATTGTTGTGAGAAATGAG 58.991 40.000 0.00 0.00 0.00 2.90
4536 5671 6.241207 ACGTAATTGTTGTGAGAAATGAGG 57.759 37.500 0.00 0.00 0.00 3.86
4537 5672 5.181245 ACGTAATTGTTGTGAGAAATGAGGG 59.819 40.000 0.00 0.00 0.00 4.30
4538 5673 5.181245 CGTAATTGTTGTGAGAAATGAGGGT 59.819 40.000 0.00 0.00 0.00 4.34
4539 5674 5.458041 AATTGTTGTGAGAAATGAGGGTG 57.542 39.130 0.00 0.00 0.00 4.61
4540 5675 2.862541 TGTTGTGAGAAATGAGGGTGG 58.137 47.619 0.00 0.00 0.00 4.61
4541 5676 2.441375 TGTTGTGAGAAATGAGGGTGGA 59.559 45.455 0.00 0.00 0.00 4.02
4542 5677 3.074390 TGTTGTGAGAAATGAGGGTGGAT 59.926 43.478 0.00 0.00 0.00 3.41
4543 5678 3.354948 TGTGAGAAATGAGGGTGGATG 57.645 47.619 0.00 0.00 0.00 3.51
4544 5679 2.644299 TGTGAGAAATGAGGGTGGATGT 59.356 45.455 0.00 0.00 0.00 3.06
4545 5680 3.012518 GTGAGAAATGAGGGTGGATGTG 58.987 50.000 0.00 0.00 0.00 3.21
4546 5681 2.019984 GAGAAATGAGGGTGGATGTGC 58.980 52.381 0.00 0.00 0.00 4.57
4547 5682 1.106285 GAAATGAGGGTGGATGTGCC 58.894 55.000 0.00 0.00 37.10 5.01
4548 5683 0.409092 AAATGAGGGTGGATGTGCCA 59.591 50.000 0.00 0.00 46.96 4.92
4555 5690 4.720902 TGGATGTGCCACCCGCTG 62.721 66.667 0.00 0.00 43.33 5.18
4556 5691 4.408821 GGATGTGCCACCCGCTGA 62.409 66.667 0.00 0.00 38.78 4.26
4557 5692 3.127533 GATGTGCCACCCGCTGAC 61.128 66.667 0.00 0.00 38.78 3.51
4574 5709 4.659172 CGGGCCAGGCAAGGACAA 62.659 66.667 15.19 0.00 38.98 3.18
4575 5710 2.677875 GGGCCAGGCAAGGACAAG 60.678 66.667 15.19 0.00 38.98 3.16
4576 5711 2.116125 GGCCAGGCAAGGACAAGT 59.884 61.111 15.19 0.00 36.38 3.16
4577 5712 2.270986 GGCCAGGCAAGGACAAGTG 61.271 63.158 15.19 0.00 36.38 3.16
4578 5713 2.924105 GCCAGGCAAGGACAAGTGC 61.924 63.158 6.55 0.00 40.14 4.40
4579 5714 1.529010 CCAGGCAAGGACAAGTGCA 60.529 57.895 0.00 0.00 42.74 4.57
4580 5715 1.521450 CCAGGCAAGGACAAGTGCAG 61.521 60.000 0.00 0.00 42.74 4.41
4581 5716 0.535780 CAGGCAAGGACAAGTGCAGA 60.536 55.000 0.00 0.00 42.74 4.26
4582 5717 0.536006 AGGCAAGGACAAGTGCAGAC 60.536 55.000 0.00 0.00 42.74 3.51
4583 5718 1.571460 GCAAGGACAAGTGCAGACG 59.429 57.895 0.00 0.00 40.58 4.18
4584 5719 1.160329 GCAAGGACAAGTGCAGACGT 61.160 55.000 0.00 0.00 40.58 4.34
4585 5720 0.861837 CAAGGACAAGTGCAGACGTC 59.138 55.000 7.70 7.70 0.00 4.34
4586 5721 0.753262 AAGGACAAGTGCAGACGTCT 59.247 50.000 13.58 13.58 0.00 4.18
4587 5722 0.315568 AGGACAAGTGCAGACGTCTC 59.684 55.000 16.96 11.33 0.00 3.36
4588 5723 1.004277 GGACAAGTGCAGACGTCTCG 61.004 60.000 16.96 12.53 0.00 4.04
4589 5724 0.040336 GACAAGTGCAGACGTCTCGA 60.040 55.000 16.96 1.42 0.00 4.04
4590 5725 0.598562 ACAAGTGCAGACGTCTCGAT 59.401 50.000 16.96 0.00 0.00 3.59
4591 5726 1.263776 CAAGTGCAGACGTCTCGATC 58.736 55.000 16.96 6.77 0.00 3.69
4592 5727 0.171455 AAGTGCAGACGTCTCGATCC 59.829 55.000 16.96 2.12 0.00 3.36
4593 5728 0.678366 AGTGCAGACGTCTCGATCCT 60.678 55.000 16.96 4.56 0.00 3.24
4594 5729 0.248296 GTGCAGACGTCTCGATCCTC 60.248 60.000 16.96 0.00 0.00 3.71
4595 5730 1.357334 GCAGACGTCTCGATCCTCC 59.643 63.158 16.96 0.00 0.00 4.30
4596 5731 1.644372 CAGACGTCTCGATCCTCCG 59.356 63.158 16.96 0.00 0.00 4.63
4597 5732 2.181521 AGACGTCTCGATCCTCCGC 61.182 63.158 13.58 0.00 0.00 5.54
4598 5733 2.124653 ACGTCTCGATCCTCCGCT 60.125 61.111 0.00 0.00 0.00 5.52
4599 5734 2.108344 GACGTCTCGATCCTCCGCTC 62.108 65.000 8.70 0.00 0.00 5.03
4600 5735 2.899044 CGTCTCGATCCTCCGCTCC 61.899 68.421 0.00 0.00 0.00 4.70
4601 5736 2.592001 TCTCGATCCTCCGCTCCG 60.592 66.667 0.00 0.00 0.00 4.63
4602 5737 2.902846 CTCGATCCTCCGCTCCGT 60.903 66.667 0.00 0.00 0.00 4.69
4603 5738 3.187699 CTCGATCCTCCGCTCCGTG 62.188 68.421 0.00 0.00 0.00 4.94
4604 5739 3.518998 CGATCCTCCGCTCCGTGT 61.519 66.667 0.00 0.00 0.00 4.49
4605 5740 2.413765 GATCCTCCGCTCCGTGTC 59.586 66.667 0.00 0.00 0.00 3.67
4606 5741 3.140225 GATCCTCCGCTCCGTGTCC 62.140 68.421 0.00 0.00 0.00 4.02
4614 5749 3.900892 CTCCGTGTCCGCGCCTAT 61.901 66.667 0.00 0.00 0.00 2.57
4615 5750 4.201679 TCCGTGTCCGCGCCTATG 62.202 66.667 0.00 0.00 0.00 2.23
4618 5753 2.817834 GTGTCCGCGCCTATGCAA 60.818 61.111 0.00 0.00 37.32 4.08
4619 5754 2.046796 TGTCCGCGCCTATGCAAA 60.047 55.556 0.00 0.00 37.32 3.68
4620 5755 2.395360 TGTCCGCGCCTATGCAAAC 61.395 57.895 0.00 0.00 37.32 2.93
4621 5756 2.822255 TCCGCGCCTATGCAAACC 60.822 61.111 0.00 0.00 37.32 3.27
4622 5757 4.236416 CCGCGCCTATGCAAACCG 62.236 66.667 0.00 0.00 37.32 4.44
4623 5758 4.236416 CGCGCCTATGCAAACCGG 62.236 66.667 0.00 0.00 37.32 5.28
4624 5759 2.822255 GCGCCTATGCAAACCGGA 60.822 61.111 9.46 0.00 37.32 5.14
4625 5760 3.098555 CGCCTATGCAAACCGGAC 58.901 61.111 9.46 0.00 37.32 4.79
4626 5761 1.449601 CGCCTATGCAAACCGGACT 60.450 57.895 9.46 0.00 37.32 3.85
4627 5762 1.429148 CGCCTATGCAAACCGGACTC 61.429 60.000 9.46 0.00 37.32 3.36
4628 5763 0.392461 GCCTATGCAAACCGGACTCA 60.392 55.000 9.46 0.00 37.47 3.41
4629 5764 1.948611 GCCTATGCAAACCGGACTCAA 60.949 52.381 9.46 0.00 37.47 3.02
4630 5765 2.432444 CCTATGCAAACCGGACTCAAA 58.568 47.619 9.46 0.00 0.00 2.69
4631 5766 3.016736 CCTATGCAAACCGGACTCAAAT 58.983 45.455 9.46 0.00 0.00 2.32
4632 5767 3.443681 CCTATGCAAACCGGACTCAAATT 59.556 43.478 9.46 0.00 0.00 1.82
4633 5768 4.082245 CCTATGCAAACCGGACTCAAATTT 60.082 41.667 9.46 0.00 0.00 1.82
4634 5769 3.810310 TGCAAACCGGACTCAAATTTT 57.190 38.095 9.46 0.00 0.00 1.82
4635 5770 3.452474 TGCAAACCGGACTCAAATTTTG 58.548 40.909 9.46 7.02 0.00 2.44
4636 5771 3.131223 TGCAAACCGGACTCAAATTTTGA 59.869 39.130 9.46 11.19 38.17 2.69
4649 5784 6.764308 TCAAATTTTGAGCCTGGAATAGAG 57.236 37.500 7.74 0.00 34.08 2.43
4650 5785 6.248433 TCAAATTTTGAGCCTGGAATAGAGT 58.752 36.000 7.74 0.00 34.08 3.24
4651 5786 6.375455 TCAAATTTTGAGCCTGGAATAGAGTC 59.625 38.462 7.74 0.00 34.08 3.36
4652 5787 4.908601 TTTTGAGCCTGGAATAGAGTCA 57.091 40.909 0.00 0.00 0.00 3.41
4653 5788 5.441718 TTTTGAGCCTGGAATAGAGTCAT 57.558 39.130 0.00 0.00 0.00 3.06
4654 5789 6.560003 TTTTGAGCCTGGAATAGAGTCATA 57.440 37.500 0.00 0.00 0.00 2.15
4655 5790 5.798125 TTGAGCCTGGAATAGAGTCATAG 57.202 43.478 0.00 0.00 0.00 2.23
4656 5791 5.066913 TGAGCCTGGAATAGAGTCATAGA 57.933 43.478 0.00 0.00 0.00 1.98
4657 5792 4.830046 TGAGCCTGGAATAGAGTCATAGAC 59.170 45.833 0.00 0.00 0.00 2.59
4658 5793 4.156477 AGCCTGGAATAGAGTCATAGACC 58.844 47.826 0.00 0.00 32.18 3.85
4659 5794 3.259625 GCCTGGAATAGAGTCATAGACCC 59.740 52.174 0.00 0.00 32.18 4.46
4660 5795 3.835395 CCTGGAATAGAGTCATAGACCCC 59.165 52.174 0.00 0.00 32.18 4.95
4661 5796 3.497332 TGGAATAGAGTCATAGACCCCG 58.503 50.000 0.00 0.00 32.18 5.73
4662 5797 3.117246 TGGAATAGAGTCATAGACCCCGT 60.117 47.826 0.00 0.00 32.18 5.28
4663 5798 3.256136 GGAATAGAGTCATAGACCCCGTG 59.744 52.174 0.00 0.00 32.18 4.94
4664 5799 1.688772 TAGAGTCATAGACCCCGTGC 58.311 55.000 0.00 0.00 32.18 5.34
4665 5800 1.065928 GAGTCATAGACCCCGTGCG 59.934 63.158 0.00 0.00 32.18 5.34
4666 5801 2.106332 GTCATAGACCCCGTGCGG 59.894 66.667 3.25 3.25 0.00 5.69
4667 5802 2.043752 TCATAGACCCCGTGCGGA 60.044 61.111 12.71 0.00 37.50 5.54
4668 5803 1.456892 TCATAGACCCCGTGCGGAT 60.457 57.895 12.71 0.00 37.50 4.18
4669 5804 0.178984 TCATAGACCCCGTGCGGATA 60.179 55.000 12.71 0.34 37.50 2.59
4670 5805 0.677288 CATAGACCCCGTGCGGATAA 59.323 55.000 12.71 0.00 37.50 1.75
4671 5806 1.069513 CATAGACCCCGTGCGGATAAA 59.930 52.381 12.71 0.00 37.50 1.40
4672 5807 1.193323 TAGACCCCGTGCGGATAAAA 58.807 50.000 12.71 0.00 37.50 1.52
4673 5808 0.325602 AGACCCCGTGCGGATAAAAA 59.674 50.000 12.71 0.00 37.50 1.94
4695 5830 4.961438 AGGTAGTTTGGACCTAAACGAA 57.039 40.909 11.46 4.71 45.82 3.85
4696 5831 4.635223 AGGTAGTTTGGACCTAAACGAAC 58.365 43.478 11.46 10.00 45.82 3.95
4697 5832 4.101430 AGGTAGTTTGGACCTAAACGAACA 59.899 41.667 14.95 3.33 45.82 3.18
4698 5833 4.450080 GGTAGTTTGGACCTAAACGAACAG 59.550 45.833 18.27 0.00 43.51 3.16
4699 5834 4.146745 AGTTTGGACCTAAACGAACAGT 57.853 40.909 11.46 0.00 43.51 3.55
4700 5835 4.520179 AGTTTGGACCTAAACGAACAGTT 58.480 39.130 11.46 0.00 46.76 3.16
4709 5844 2.622546 AACGAACAGTTTGCGTTGTT 57.377 40.000 10.97 0.00 45.28 2.83
4710 5845 1.889891 ACGAACAGTTTGCGTTGTTG 58.110 45.000 0.00 0.00 37.63 3.33
4711 5846 1.187715 CGAACAGTTTGCGTTGTTGG 58.812 50.000 0.00 0.00 37.63 3.77
4712 5847 0.920664 GAACAGTTTGCGTTGTTGGC 59.079 50.000 0.00 0.00 37.63 4.52
4713 5848 0.800300 AACAGTTTGCGTTGTTGGCG 60.800 50.000 0.00 0.00 36.26 5.69
4720 5855 2.718731 CGTTGTTGGCGCCTTTGA 59.281 55.556 29.70 3.37 0.00 2.69
4721 5856 1.370414 CGTTGTTGGCGCCTTTGAG 60.370 57.895 29.70 10.92 0.00 3.02
4722 5857 1.733526 GTTGTTGGCGCCTTTGAGT 59.266 52.632 29.70 0.00 0.00 3.41
4723 5858 0.102300 GTTGTTGGCGCCTTTGAGTT 59.898 50.000 29.70 0.00 0.00 3.01
4724 5859 0.102120 TTGTTGGCGCCTTTGAGTTG 59.898 50.000 29.70 0.00 0.00 3.16
4725 5860 1.661509 GTTGGCGCCTTTGAGTTGC 60.662 57.895 29.70 3.13 0.00 4.17
4726 5861 1.827789 TTGGCGCCTTTGAGTTGCT 60.828 52.632 29.70 0.00 0.00 3.91
4727 5862 1.795170 TTGGCGCCTTTGAGTTGCTC 61.795 55.000 29.70 0.00 0.00 4.26
4728 5863 1.968540 GGCGCCTTTGAGTTGCTCT 60.969 57.895 22.15 0.00 0.00 4.09
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 51 0.324943 TGCTTAGGTTCTCTGTGGCC 59.675 55.000 0.00 0.00 0.00 5.36
56 58 5.157781 CGTAGCTCATATGCTTAGGTTCTC 58.842 45.833 0.00 0.00 43.74 2.87
85 87 9.959749 ATCTTAAGTGTCTTTTAAAATTGCGAA 57.040 25.926 0.09 0.00 0.00 4.70
170 207 8.317679 TCATTATTCGGGGTGAAAAATGATTTT 58.682 29.630 0.00 0.00 40.71 1.82
171 208 7.763985 GTCATTATTCGGGGTGAAAAATGATTT 59.236 33.333 0.00 0.00 40.71 2.17
172 209 7.093552 TGTCATTATTCGGGGTGAAAAATGATT 60.094 33.333 0.00 0.00 40.71 2.57
173 210 6.379703 TGTCATTATTCGGGGTGAAAAATGAT 59.620 34.615 0.00 0.00 40.71 2.45
174 211 5.712446 TGTCATTATTCGGGGTGAAAAATGA 59.288 36.000 0.00 0.00 40.71 2.57
175 212 5.960113 TGTCATTATTCGGGGTGAAAAATG 58.040 37.500 0.00 0.00 40.71 2.32
176 213 6.790232 ATGTCATTATTCGGGGTGAAAAAT 57.210 33.333 0.00 0.00 40.71 1.82
177 214 7.340743 ACATATGTCATTATTCGGGGTGAAAAA 59.659 33.333 1.41 0.00 40.71 1.94
178 215 6.831353 ACATATGTCATTATTCGGGGTGAAAA 59.169 34.615 1.41 0.00 40.71 2.29
179 216 6.361433 ACATATGTCATTATTCGGGGTGAAA 58.639 36.000 1.41 0.00 40.71 2.69
180 217 5.935945 ACATATGTCATTATTCGGGGTGAA 58.064 37.500 1.41 0.00 41.81 3.18
181 218 5.560722 ACATATGTCATTATTCGGGGTGA 57.439 39.130 1.41 0.00 0.00 4.02
182 219 5.762711 TCAACATATGTCATTATTCGGGGTG 59.237 40.000 9.23 0.00 0.00 4.61
183 220 5.935945 TCAACATATGTCATTATTCGGGGT 58.064 37.500 9.23 0.00 0.00 4.95
184 221 6.875948 TTCAACATATGTCATTATTCGGGG 57.124 37.500 9.23 0.00 0.00 5.73
194 231 8.832521 GGAACCGTATAAATTCAACATATGTCA 58.167 33.333 9.23 0.00 0.00 3.58
195 232 8.287503 GGGAACCGTATAAATTCAACATATGTC 58.712 37.037 9.23 0.00 40.86 3.06
196 233 8.161699 GGGAACCGTATAAATTCAACATATGT 57.838 34.615 1.41 1.41 40.86 2.29
235 272 0.746563 CACTTGTCACGGGGTTGTGT 60.747 55.000 0.00 0.00 40.74 3.72
255 292 4.441792 TCTGTCAATGGTCATATTCGGTG 58.558 43.478 0.00 0.00 0.00 4.94
265 302 6.105333 GGCTAGATATCATCTGTCAATGGTC 58.895 44.000 5.32 0.00 40.51 4.02
268 305 5.718146 ACGGCTAGATATCATCTGTCAATG 58.282 41.667 5.32 0.00 40.51 2.82
321 358 2.470156 GACATGCAGTCGCCATCAA 58.530 52.632 0.00 0.00 37.53 2.57
322 359 4.206958 GACATGCAGTCGCCATCA 57.793 55.556 0.00 0.00 37.53 3.07
332 369 5.009911 GGCTTATTATGGTGATTGACATGCA 59.990 40.000 0.00 0.00 0.00 3.96
333 370 5.464168 GGCTTATTATGGTGATTGACATGC 58.536 41.667 0.00 0.00 0.00 4.06
349 386 4.019591 ACTTTTCGTGTAGAGGGGCTTATT 60.020 41.667 0.00 0.00 0.00 1.40
351 388 2.901839 ACTTTTCGTGTAGAGGGGCTTA 59.098 45.455 0.00 0.00 0.00 3.09
352 389 1.697982 ACTTTTCGTGTAGAGGGGCTT 59.302 47.619 0.00 0.00 0.00 4.35
353 390 1.349067 ACTTTTCGTGTAGAGGGGCT 58.651 50.000 0.00 0.00 0.00 5.19
354 391 2.998670 GTTACTTTTCGTGTAGAGGGGC 59.001 50.000 0.00 0.00 0.00 5.80
356 393 4.922103 GTGAGTTACTTTTCGTGTAGAGGG 59.078 45.833 0.00 0.00 0.00 4.30
361 398 5.893687 TGACAGTGAGTTACTTTTCGTGTA 58.106 37.500 0.00 0.00 37.60 2.90
362 399 4.751060 TGACAGTGAGTTACTTTTCGTGT 58.249 39.130 0.00 0.00 37.60 4.49
363 400 5.712217 TTGACAGTGAGTTACTTTTCGTG 57.288 39.130 0.00 0.00 37.60 4.35
364 401 4.270325 GCTTGACAGTGAGTTACTTTTCGT 59.730 41.667 0.00 0.00 37.60 3.85
371 408 3.386768 TCCTGCTTGACAGTGAGTTAC 57.613 47.619 0.00 0.00 45.68 2.50
376 413 2.027745 GGAGATTCCTGCTTGACAGTGA 60.028 50.000 0.00 0.00 45.68 3.41
384 421 0.034670 GCTGGTGGAGATTCCTGCTT 60.035 55.000 0.00 0.00 42.58 3.91
410 447 8.519492 AACAAAACTGGAATTATCATTGTTCG 57.481 30.769 0.00 0.00 35.51 3.95
482 519 2.803133 GCATGACTAGAGCGGCACATTA 60.803 50.000 1.45 0.00 0.00 1.90
483 520 1.945387 CATGACTAGAGCGGCACATT 58.055 50.000 1.45 0.00 0.00 2.71
484 521 0.531532 GCATGACTAGAGCGGCACAT 60.532 55.000 1.45 0.00 0.00 3.21
485 522 1.153568 GCATGACTAGAGCGGCACA 60.154 57.895 1.45 0.00 0.00 4.57
486 523 0.460987 AAGCATGACTAGAGCGGCAC 60.461 55.000 1.45 0.00 0.00 5.01
487 524 0.250234 AAAGCATGACTAGAGCGGCA 59.750 50.000 1.45 0.00 0.00 5.69
488 525 1.063174 CAAAAGCATGACTAGAGCGGC 59.937 52.381 0.00 0.00 0.00 6.53
489 526 2.350522 ACAAAAGCATGACTAGAGCGG 58.649 47.619 0.00 0.00 0.00 5.52
490 527 4.177026 ACTACAAAAGCATGACTAGAGCG 58.823 43.478 0.00 0.00 0.00 5.03
491 528 5.171476 TGACTACAAAAGCATGACTAGAGC 58.829 41.667 0.00 0.00 0.00 4.09
492 529 6.257411 CCATGACTACAAAAGCATGACTAGAG 59.743 42.308 0.00 0.00 39.82 2.43
493 530 6.108687 CCATGACTACAAAAGCATGACTAGA 58.891 40.000 0.00 0.00 39.82 2.43
494 531 5.877012 ACCATGACTACAAAAGCATGACTAG 59.123 40.000 0.00 0.00 39.82 2.57
495 532 5.804639 ACCATGACTACAAAAGCATGACTA 58.195 37.500 0.00 0.00 39.82 2.59
512 551 3.130869 GCATGAAAACAGCCATACCATGA 59.869 43.478 0.00 0.00 33.72 3.07
513 552 3.131577 AGCATGAAAACAGCCATACCATG 59.868 43.478 0.00 0.00 34.66 3.66
515 554 2.806434 AGCATGAAAACAGCCATACCA 58.194 42.857 0.00 0.00 0.00 3.25
516 555 3.874392 AAGCATGAAAACAGCCATACC 57.126 42.857 0.00 0.00 0.00 2.73
517 556 7.115378 GCATATAAAGCATGAAAACAGCCATAC 59.885 37.037 0.00 0.00 0.00 2.39
518 557 7.147312 GCATATAAAGCATGAAAACAGCCATA 58.853 34.615 0.00 0.00 0.00 2.74
519 558 5.987347 GCATATAAAGCATGAAAACAGCCAT 59.013 36.000 0.00 0.00 0.00 4.40
520 559 5.350633 GCATATAAAGCATGAAAACAGCCA 58.649 37.500 0.00 0.00 0.00 4.75
521 560 4.746611 GGCATATAAAGCATGAAAACAGCC 59.253 41.667 0.00 0.00 0.00 4.85
522 561 4.442073 CGGCATATAAAGCATGAAAACAGC 59.558 41.667 0.00 0.00 0.00 4.40
523 562 4.442073 GCGGCATATAAAGCATGAAAACAG 59.558 41.667 0.00 0.00 0.00 3.16
528 567 2.480037 CGAGCGGCATATAAAGCATGAA 59.520 45.455 1.45 0.00 0.00 2.57
544 583 1.883084 GCAGATACAACCCCGAGCG 60.883 63.158 0.00 0.00 0.00 5.03
549 588 3.157087 CCAATATGGCAGATACAACCCC 58.843 50.000 0.00 0.00 0.00 4.95
582 621 4.019174 CAAGGATACACCATGAAAAGGCT 58.981 43.478 0.00 0.00 39.44 4.58
626 676 7.596749 TGATACGAGACAAAGAAAATCTTCC 57.403 36.000 0.00 0.00 35.27 3.46
668 1551 5.049954 CCACAGCATTTTCCACTCAAATTTG 60.050 40.000 12.15 12.15 0.00 2.32
669 1552 5.058490 CCACAGCATTTTCCACTCAAATTT 58.942 37.500 0.00 0.00 0.00 1.82
676 1559 3.130264 TGCCACAGCATTTTCCACT 57.870 47.368 0.00 0.00 46.52 4.00
726 1609 9.586435 GGAGATTTTTACATTTTAACCTCCATG 57.414 33.333 0.00 0.00 37.14 3.66
727 1610 9.320295 TGGAGATTTTTACATTTTAACCTCCAT 57.680 29.630 0.00 0.00 40.79 3.41
728 1611 8.581578 GTGGAGATTTTTACATTTTAACCTCCA 58.418 33.333 0.00 0.00 42.66 3.86
729 1612 8.581578 TGTGGAGATTTTTACATTTTAACCTCC 58.418 33.333 0.00 0.00 37.54 4.30
731 1614 9.927668 CATGTGGAGATTTTTACATTTTAACCT 57.072 29.630 0.00 0.00 31.84 3.50
732 1615 9.921637 TCATGTGGAGATTTTTACATTTTAACC 57.078 29.630 0.00 0.00 31.84 2.85
734 1617 9.619316 CGTCATGTGGAGATTTTTACATTTTAA 57.381 29.630 0.00 0.00 31.84 1.52
735 1618 9.004717 TCGTCATGTGGAGATTTTTACATTTTA 57.995 29.630 0.00 0.00 31.84 1.52
736 1619 7.807907 GTCGTCATGTGGAGATTTTTACATTTT 59.192 33.333 0.00 0.00 31.84 1.82
737 1620 7.305474 GTCGTCATGTGGAGATTTTTACATTT 58.695 34.615 0.00 0.00 31.84 2.32
738 1621 6.402118 CGTCGTCATGTGGAGATTTTTACATT 60.402 38.462 0.00 0.00 31.84 2.71
739 1622 5.063438 CGTCGTCATGTGGAGATTTTTACAT 59.937 40.000 0.00 0.00 34.31 2.29
740 1623 4.387559 CGTCGTCATGTGGAGATTTTTACA 59.612 41.667 0.00 0.00 0.00 2.41
741 1624 4.624024 TCGTCGTCATGTGGAGATTTTTAC 59.376 41.667 0.00 0.00 0.00 2.01
742 1625 4.811908 TCGTCGTCATGTGGAGATTTTTA 58.188 39.130 0.00 0.00 0.00 1.52
743 1626 3.659786 TCGTCGTCATGTGGAGATTTTT 58.340 40.909 0.00 0.00 0.00 1.94
744 1627 3.313012 TCGTCGTCATGTGGAGATTTT 57.687 42.857 0.00 0.00 0.00 1.82
745 1628 3.119137 TGATCGTCGTCATGTGGAGATTT 60.119 43.478 0.00 0.00 0.00 2.17
746 1629 2.427095 TGATCGTCGTCATGTGGAGATT 59.573 45.455 0.00 0.00 0.00 2.40
747 1630 2.024414 TGATCGTCGTCATGTGGAGAT 58.976 47.619 0.00 0.00 0.00 2.75
748 1631 1.459450 TGATCGTCGTCATGTGGAGA 58.541 50.000 0.00 0.00 0.00 3.71
749 1632 1.920574 GTTGATCGTCGTCATGTGGAG 59.079 52.381 0.00 0.00 0.00 3.86
750 1633 1.271102 TGTTGATCGTCGTCATGTGGA 59.729 47.619 0.00 0.00 0.00 4.02
751 1634 1.390123 GTGTTGATCGTCGTCATGTGG 59.610 52.381 0.00 0.00 0.00 4.17
752 1635 1.057706 CGTGTTGATCGTCGTCATGTG 59.942 52.381 0.00 0.00 0.00 3.21
753 1636 1.336877 CGTGTTGATCGTCGTCATGT 58.663 50.000 0.00 0.00 0.00 3.21
754 1637 0.640262 CCGTGTTGATCGTCGTCATG 59.360 55.000 0.00 0.00 0.00 3.07
755 1638 0.457853 CCCGTGTTGATCGTCGTCAT 60.458 55.000 0.00 0.00 0.00 3.06
756 1639 1.081041 CCCGTGTTGATCGTCGTCA 60.081 57.895 0.00 0.00 0.00 4.35
757 1640 1.069378 GTCCCGTGTTGATCGTCGTC 61.069 60.000 0.00 0.00 0.00 4.20
758 1641 1.080974 GTCCCGTGTTGATCGTCGT 60.081 57.895 0.00 0.00 0.00 4.34
759 1642 1.804326 GGTCCCGTGTTGATCGTCG 60.804 63.158 0.00 0.00 0.00 5.12
760 1643 0.458025 GAGGTCCCGTGTTGATCGTC 60.458 60.000 0.00 0.00 0.00 4.20
761 1644 1.183030 TGAGGTCCCGTGTTGATCGT 61.183 55.000 0.00 0.00 0.00 3.73
762 1645 0.037697 TTGAGGTCCCGTGTTGATCG 60.038 55.000 0.00 0.00 0.00 3.69
763 1646 2.178912 TTTGAGGTCCCGTGTTGATC 57.821 50.000 0.00 0.00 0.00 2.92
764 1647 2.649531 TTTTGAGGTCCCGTGTTGAT 57.350 45.000 0.00 0.00 0.00 2.57
765 1648 2.158740 TGATTTTGAGGTCCCGTGTTGA 60.159 45.455 0.00 0.00 0.00 3.18
766 1649 2.031157 GTGATTTTGAGGTCCCGTGTTG 60.031 50.000 0.00 0.00 0.00 3.33
767 1650 2.227194 GTGATTTTGAGGTCCCGTGTT 58.773 47.619 0.00 0.00 0.00 3.32
768 1651 1.876416 CGTGATTTTGAGGTCCCGTGT 60.876 52.381 0.00 0.00 0.00 4.49
769 1652 0.796312 CGTGATTTTGAGGTCCCGTG 59.204 55.000 0.00 0.00 0.00 4.94
770 1653 0.682852 TCGTGATTTTGAGGTCCCGT 59.317 50.000 0.00 0.00 0.00 5.28
771 1654 1.665679 CATCGTGATTTTGAGGTCCCG 59.334 52.381 0.00 0.00 0.00 5.14
772 1655 2.017049 CCATCGTGATTTTGAGGTCCC 58.983 52.381 0.00 0.00 0.00 4.46
773 1656 2.985896 TCCATCGTGATTTTGAGGTCC 58.014 47.619 0.00 0.00 0.00 4.46
774 1657 3.375299 CCTTCCATCGTGATTTTGAGGTC 59.625 47.826 0.00 0.00 0.00 3.85
775 1658 3.347216 CCTTCCATCGTGATTTTGAGGT 58.653 45.455 0.00 0.00 0.00 3.85
776 1659 2.098117 GCCTTCCATCGTGATTTTGAGG 59.902 50.000 0.00 0.00 0.00 3.86
777 1660 2.223112 CGCCTTCCATCGTGATTTTGAG 60.223 50.000 0.00 0.00 0.00 3.02
778 1661 1.737236 CGCCTTCCATCGTGATTTTGA 59.263 47.619 0.00 0.00 0.00 2.69
779 1662 1.795162 GCGCCTTCCATCGTGATTTTG 60.795 52.381 0.00 0.00 0.00 2.44
833 1765 0.673985 GATCGATGTGGGATCCGTGA 59.326 55.000 0.54 0.00 35.37 4.35
854 1791 4.377897 CCTATAAAACAGTGGGGATCGAC 58.622 47.826 0.00 0.00 0.00 4.20
1454 2421 0.615331 GGCCATCACACAGGAAGAGA 59.385 55.000 0.00 0.00 0.00 3.10
1455 2422 0.742281 CGGCCATCACACAGGAAGAG 60.742 60.000 2.24 0.00 0.00 2.85
1456 2423 1.296392 CGGCCATCACACAGGAAGA 59.704 57.895 2.24 0.00 0.00 2.87
1471 2439 1.657751 GGGTCTCAAAATCAGGCGGC 61.658 60.000 0.00 0.00 0.00 6.53
1501 2469 1.613630 GGACCTGGAGAGGAAGGCA 60.614 63.158 0.00 0.00 42.93 4.75
1938 2906 1.513586 CGCCGTCTCCACGTACTTC 60.514 63.158 0.00 0.00 45.17 3.01
1987 2955 3.966543 AACCCTGAACCCCGGCTG 61.967 66.667 0.00 0.00 0.00 4.85
1988 2956 3.966543 CAACCCTGAACCCCGGCT 61.967 66.667 0.00 0.00 0.00 5.52
2019 2987 1.823470 GTGGCGGCTATCATTGGCA 60.823 57.895 11.43 0.00 34.24 4.92
2135 3103 5.751680 CCGCATTGAAATATCTAACACTGG 58.248 41.667 0.00 0.00 0.00 4.00
2143 3111 7.141363 GTCAAATTAGCCGCATTGAAATATCT 58.859 34.615 0.00 0.00 33.93 1.98
2185 3153 2.537560 GCATCGAGTTCATGCCCGG 61.538 63.158 0.00 0.00 40.79 5.73
2224 3192 2.471749 CGTGCGACAAGTAATTCGGAAC 60.472 50.000 0.00 0.00 37.32 3.62
2225 3193 1.722464 CGTGCGACAAGTAATTCGGAA 59.278 47.619 0.00 0.00 37.32 4.30
2226 3194 1.336148 ACGTGCGACAAGTAATTCGGA 60.336 47.619 0.00 0.00 35.73 4.55
2227 3195 1.065358 ACGTGCGACAAGTAATTCGG 58.935 50.000 0.00 0.00 35.73 4.30
2228 3196 3.544682 TCATACGTGCGACAAGTAATTCG 59.455 43.478 0.00 0.00 32.82 3.34
2229 3197 4.561606 ACTCATACGTGCGACAAGTAATTC 59.438 41.667 0.00 0.00 32.82 2.17
2230 3198 4.326278 CACTCATACGTGCGACAAGTAATT 59.674 41.667 0.00 0.00 32.82 1.40
2231 3199 3.857665 CACTCATACGTGCGACAAGTAAT 59.142 43.478 0.00 0.00 32.82 1.89
2232 3200 3.239254 CACTCATACGTGCGACAAGTAA 58.761 45.455 0.00 0.00 32.82 2.24
2233 3201 2.227149 ACACTCATACGTGCGACAAGTA 59.773 45.455 0.00 7.72 38.45 2.24
2234 3202 1.000607 ACACTCATACGTGCGACAAGT 60.001 47.619 0.00 0.00 38.45 3.16
2235 3203 1.698165 ACACTCATACGTGCGACAAG 58.302 50.000 0.00 0.00 38.45 3.16
2236 3204 2.993449 TACACTCATACGTGCGACAA 57.007 45.000 0.00 0.00 38.45 3.18
2237 3205 2.681344 AGATACACTCATACGTGCGACA 59.319 45.455 0.00 0.00 38.45 4.35
2238 3206 3.335786 AGATACACTCATACGTGCGAC 57.664 47.619 0.00 0.00 38.45 5.19
2239 3207 4.374399 TCTAGATACACTCATACGTGCGA 58.626 43.478 0.00 0.00 38.45 5.10
2240 3208 4.727235 TCTAGATACACTCATACGTGCG 57.273 45.455 0.00 0.00 38.45 5.34
2241 3209 6.003234 ACATCTAGATACACTCATACGTGC 57.997 41.667 4.54 0.00 38.45 5.34
2242 3210 9.548208 CAATACATCTAGATACACTCATACGTG 57.452 37.037 4.54 0.00 40.67 4.49
2243 3211 9.286170 ACAATACATCTAGATACACTCATACGT 57.714 33.333 4.54 0.00 0.00 3.57
2267 3235 8.144478 GCTGAAATGGATGTATCTAGAACTACA 58.856 37.037 8.32 8.32 32.75 2.74
2268 3236 7.327275 CGCTGAAATGGATGTATCTAGAACTAC 59.673 40.741 0.00 0.00 0.00 2.73
2269 3237 7.230712 TCGCTGAAATGGATGTATCTAGAACTA 59.769 37.037 0.00 0.00 0.00 2.24
2270 3238 6.040955 TCGCTGAAATGGATGTATCTAGAACT 59.959 38.462 0.00 0.00 0.00 3.01
2271 3239 6.216569 TCGCTGAAATGGATGTATCTAGAAC 58.783 40.000 0.00 0.00 0.00 3.01
2272 3240 6.405278 TCGCTGAAATGGATGTATCTAGAA 57.595 37.500 0.00 0.00 0.00 2.10
2273 3241 6.209391 TCATCGCTGAAATGGATGTATCTAGA 59.791 38.462 0.00 0.00 38.86 2.43
2274 3242 6.393171 TCATCGCTGAAATGGATGTATCTAG 58.607 40.000 0.00 0.00 38.86 2.43
2275 3243 6.015095 ACTCATCGCTGAAATGGATGTATCTA 60.015 38.462 0.00 0.00 38.86 1.98
2276 3244 5.219343 TCATCGCTGAAATGGATGTATCT 57.781 39.130 0.00 0.00 38.86 1.98
2277 3245 4.993584 ACTCATCGCTGAAATGGATGTATC 59.006 41.667 0.00 0.00 38.86 2.24
2278 3246 4.965814 ACTCATCGCTGAAATGGATGTAT 58.034 39.130 0.00 0.00 38.86 2.29
2279 3247 4.406648 ACTCATCGCTGAAATGGATGTA 57.593 40.909 0.00 0.00 38.86 2.29
2280 3248 3.272574 ACTCATCGCTGAAATGGATGT 57.727 42.857 0.00 0.00 38.86 3.06
2281 3249 5.936686 ATTACTCATCGCTGAAATGGATG 57.063 39.130 0.00 0.00 39.07 3.51
2282 3250 6.238842 CCAAATTACTCATCGCTGAAATGGAT 60.239 38.462 0.00 0.00 0.00 3.41
2283 3251 5.066375 CCAAATTACTCATCGCTGAAATGGA 59.934 40.000 0.00 0.00 0.00 3.41
2284 3252 5.066375 TCCAAATTACTCATCGCTGAAATGG 59.934 40.000 0.00 0.00 0.00 3.16
2285 3253 6.122850 TCCAAATTACTCATCGCTGAAATG 57.877 37.500 0.00 0.00 0.00 2.32
2286 3254 6.555315 GTTCCAAATTACTCATCGCTGAAAT 58.445 36.000 0.00 0.00 0.00 2.17
2287 3255 5.390461 CGTTCCAAATTACTCATCGCTGAAA 60.390 40.000 0.00 0.00 0.00 2.69
2288 3256 4.092821 CGTTCCAAATTACTCATCGCTGAA 59.907 41.667 0.00 0.00 0.00 3.02
2289 3257 3.616821 CGTTCCAAATTACTCATCGCTGA 59.383 43.478 0.00 0.00 0.00 4.26
2290 3258 3.242413 CCGTTCCAAATTACTCATCGCTG 60.242 47.826 0.00 0.00 0.00 5.18
2291 3259 2.936498 CCGTTCCAAATTACTCATCGCT 59.064 45.455 0.00 0.00 0.00 4.93
2292 3260 2.933906 TCCGTTCCAAATTACTCATCGC 59.066 45.455 0.00 0.00 0.00 4.58
2293 3261 3.555956 CCTCCGTTCCAAATTACTCATCG 59.444 47.826 0.00 0.00 0.00 3.84
2294 3262 3.877508 CCCTCCGTTCCAAATTACTCATC 59.122 47.826 0.00 0.00 0.00 2.92
2295 3263 3.521937 TCCCTCCGTTCCAAATTACTCAT 59.478 43.478 0.00 0.00 0.00 2.90
2296 3264 2.907696 TCCCTCCGTTCCAAATTACTCA 59.092 45.455 0.00 0.00 0.00 3.41
2297 3265 3.055312 ACTCCCTCCGTTCCAAATTACTC 60.055 47.826 0.00 0.00 0.00 2.59
2298 3266 2.910977 ACTCCCTCCGTTCCAAATTACT 59.089 45.455 0.00 0.00 0.00 2.24
2299 3267 3.345508 ACTCCCTCCGTTCCAAATTAC 57.654 47.619 0.00 0.00 0.00 1.89
2300 3268 6.555738 TCATATACTCCCTCCGTTCCAAATTA 59.444 38.462 0.00 0.00 0.00 1.40
2301 3269 5.368523 TCATATACTCCCTCCGTTCCAAATT 59.631 40.000 0.00 0.00 0.00 1.82
2302 3270 4.905456 TCATATACTCCCTCCGTTCCAAAT 59.095 41.667 0.00 0.00 0.00 2.32
2303 3271 4.291792 TCATATACTCCCTCCGTTCCAAA 58.708 43.478 0.00 0.00 0.00 3.28
2304 3272 3.918566 TCATATACTCCCTCCGTTCCAA 58.081 45.455 0.00 0.00 0.00 3.53
2305 3273 3.605726 TCATATACTCCCTCCGTTCCA 57.394 47.619 0.00 0.00 0.00 3.53
2306 3274 7.288560 TCTATATCATATACTCCCTCCGTTCC 58.711 42.308 0.00 0.00 0.00 3.62
2307 3275 7.994334 ACTCTATATCATATACTCCCTCCGTTC 59.006 40.741 0.00 0.00 0.00 3.95
2308 3276 7.874252 ACTCTATATCATATACTCCCTCCGTT 58.126 38.462 0.00 0.00 0.00 4.44
2309 3277 7.454553 ACTCTATATCATATACTCCCTCCGT 57.545 40.000 0.00 0.00 0.00 4.69
2310 3278 8.653191 ACTACTCTATATCATATACTCCCTCCG 58.347 40.741 0.00 0.00 0.00 4.63
2408 3379 3.872459 AAGGCCAGCTGAGCTAAATAT 57.128 42.857 17.39 0.00 36.40 1.28
2621 3597 6.859112 TTAGCCTACAATATCAGATCCCTC 57.141 41.667 0.00 0.00 0.00 4.30
2652 3628 6.096001 GCCTCCTGAATATTGTTTCAATGACT 59.904 38.462 0.00 0.00 35.31 3.41
2668 3644 6.872585 AAATAATTGGAATTGCCTCCTGAA 57.127 33.333 0.00 0.00 36.35 3.02
2716 3692 3.460825 ACTGTTAGTACCATCACCCCAT 58.539 45.455 0.00 0.00 0.00 4.00
2732 3716 5.105635 CCATATCACAATCTTGCCAACTGTT 60.106 40.000 0.00 0.00 0.00 3.16
2740 3724 3.554934 TCACCCCATATCACAATCTTGC 58.445 45.455 0.00 0.00 0.00 4.01
2768 3752 9.146984 CGACATTAATCTTGGAAACTGTTAGTA 57.853 33.333 0.00 0.00 0.00 1.82
2779 3763 7.591421 TCCTATACACGACATTAATCTTGGA 57.409 36.000 0.00 0.00 0.00 3.53
2791 3775 5.005094 AGATCCTAAGCTCCTATACACGAC 58.995 45.833 0.00 0.00 0.00 4.34
2822 3806 7.464358 CACCTATAAAATCGTTGAAGTTGAGG 58.536 38.462 0.00 0.00 0.00 3.86
2850 3834 1.091771 CCATCTGCAAGCCAGTACCG 61.092 60.000 0.00 0.00 42.38 4.02
2852 3836 1.826385 AACCATCTGCAAGCCAGTAC 58.174 50.000 0.00 0.00 42.38 2.73
2880 3895 5.455056 TGTTCCTTCTAGACAAGTGACTC 57.545 43.478 0.00 0.00 0.00 3.36
2916 3931 5.527951 CACATATCTCCTGAAGTACTCTGC 58.472 45.833 0.00 0.00 0.00 4.26
2998 4013 4.002906 ACAACCAGTACACGATGAACAT 57.997 40.909 0.00 0.00 0.00 2.71
3049 4064 4.796946 GCAATGTGCTTTTCCAAGACATGA 60.797 41.667 0.00 0.00 40.96 3.07
3051 4066 3.069872 TGCAATGTGCTTTTCCAAGACAT 59.930 39.130 1.43 0.00 45.31 3.06
3067 4082 1.470285 CGCTCCCAAGGAAATGCAATG 60.470 52.381 0.00 0.00 0.00 2.82
3116 4131 4.023193 CCTCAAAACAACGGAACAGCTAAT 60.023 41.667 0.00 0.00 0.00 1.73
3126 4141 0.109723 TCTCCCCCTCAAAACAACGG 59.890 55.000 0.00 0.00 0.00 4.44
3163 4178 6.373186 AAGTATTGATCACGATCGTGTAGA 57.627 37.500 38.72 25.41 45.55 2.59
3305 4326 2.211250 AGACATGGATGTTGCTTGCT 57.789 45.000 0.00 0.00 41.95 3.91
3365 4386 2.097954 CGTACTACAGGACGCCATGTTA 59.902 50.000 0.22 0.00 31.49 2.41
3373 4394 0.797249 GTGCTGCGTACTACAGGACG 60.797 60.000 17.34 9.67 44.76 4.79
3377 4398 2.672714 TGAAAGTGCTGCGTACTACAG 58.327 47.619 8.08 8.08 38.22 2.74
3405 4429 4.586235 AAGCCCAGGCAGCGTGTT 62.586 61.111 12.03 0.00 44.88 3.32
3407 4431 4.711949 AGAAGCCCAGGCAGCGTG 62.712 66.667 12.03 8.20 44.88 5.34
3435 4459 2.432456 TCGAATTGCGTCGCTGCT 60.432 55.556 19.50 1.76 40.88 4.24
3456 4516 1.609208 ACATGTCCACACTTCCAAGC 58.391 50.000 0.00 0.00 0.00 4.01
3463 4523 4.887071 TGAAAAAGCTAACATGTCCACACT 59.113 37.500 0.00 0.00 0.00 3.55
3464 4524 5.181690 TGAAAAAGCTAACATGTCCACAC 57.818 39.130 0.00 0.00 0.00 3.82
3476 4536 8.017373 CGAGTGAATGAAAGAATGAAAAAGCTA 58.983 33.333 0.00 0.00 0.00 3.32
3477 4537 6.860023 CGAGTGAATGAAAGAATGAAAAAGCT 59.140 34.615 0.00 0.00 0.00 3.74
3519 4584 2.508526 CTTGAAGGCAGGCTAACAACT 58.491 47.619 0.00 0.00 0.00 3.16
3563 4628 0.328258 ATACCCCAGACAACAGCCAC 59.672 55.000 0.00 0.00 0.00 5.01
3595 4660 8.475331 TCTTCGACAACAAGGTTATAATTCTC 57.525 34.615 0.00 0.00 0.00 2.87
3616 4681 7.148239 CCCGGTATTGCCATTATTTAGATCTTC 60.148 40.741 0.00 0.00 36.97 2.87
3624 4689 4.468153 ACAAACCCGGTATTGCCATTATTT 59.532 37.500 14.46 0.00 36.97 1.40
3681 4747 7.453393 ACTCAAATGTTACTTTCATCTCCTCA 58.547 34.615 0.00 0.00 0.00 3.86
3689 4755 7.963532 AGGTAGAGACTCAAATGTTACTTTCA 58.036 34.615 5.02 0.00 0.00 2.69
3703 4769 5.470047 TTTTCCTGACAAGGTAGAGACTC 57.530 43.478 0.00 0.00 44.82 3.36
3707 4773 5.119694 GCCTATTTTCCTGACAAGGTAGAG 58.880 45.833 0.00 0.00 44.82 2.43
3716 4784 2.396590 TCCACGCCTATTTTCCTGAC 57.603 50.000 0.00 0.00 0.00 3.51
3732 4800 1.219124 GCATCCTCTGAGCGTTCCA 59.781 57.895 0.00 0.00 0.00 3.53
3738 4806 4.061596 GGTTTATACAGCATCCTCTGAGC 58.938 47.826 0.00 0.00 37.51 4.26
3740 4808 5.455183 CCATGGTTTATACAGCATCCTCTGA 60.455 44.000 2.57 0.00 37.51 3.27
3742 4810 4.202503 CCCATGGTTTATACAGCATCCTCT 60.203 45.833 11.73 0.00 32.42 3.69
3743 4811 4.074970 CCCATGGTTTATACAGCATCCTC 58.925 47.826 11.73 0.00 32.42 3.71
3744 4812 3.463329 ACCCATGGTTTATACAGCATCCT 59.537 43.478 11.73 0.00 32.42 3.24
3764 4835 4.515567 ACTGAAGAATCGTTTTCTCCAACC 59.484 41.667 4.31 0.00 0.00 3.77
3853 4936 5.301045 ACCACCTAACTAACTTGCCTTTTTC 59.699 40.000 0.00 0.00 0.00 2.29
3858 4943 2.552373 GCACCACCTAACTAACTTGCCT 60.552 50.000 0.00 0.00 0.00 4.75
4056 5167 1.166129 GGGAGGGAGAAAAGAAACGC 58.834 55.000 0.00 0.00 0.00 4.84
4077 5196 2.357638 TCGCGGATTTCAACGGCA 60.358 55.556 6.13 0.00 34.16 5.69
4120 5244 2.672381 CACACCAAAAACAGGCAAACAG 59.328 45.455 0.00 0.00 0.00 3.16
4180 5307 1.067693 CAGCACGTGAAACAGCGATA 58.932 50.000 22.23 0.00 41.70 2.92
4181 5308 0.599991 TCAGCACGTGAAACAGCGAT 60.600 50.000 22.23 0.00 41.70 4.58
4182 5309 0.599991 ATCAGCACGTGAAACAGCGA 60.600 50.000 22.23 5.12 41.70 4.93
4197 5324 0.799917 CACCGTCAGAGCACGATCAG 60.800 60.000 0.00 0.00 42.69 2.90
4216 5343 2.364324 TGACAACACACCTCCACTACTC 59.636 50.000 0.00 0.00 0.00 2.59
4217 5344 2.394632 TGACAACACACCTCCACTACT 58.605 47.619 0.00 0.00 0.00 2.57
4220 5347 3.297134 AAATGACAACACACCTCCACT 57.703 42.857 0.00 0.00 0.00 4.00
4221 5348 4.615912 GCATAAATGACAACACACCTCCAC 60.616 45.833 0.00 0.00 0.00 4.02
4225 5352 3.766545 AGGCATAAATGACAACACACCT 58.233 40.909 0.00 0.00 38.64 4.00
4264 5391 2.956333 CCTTCCTTTCTTCCAAAACCGT 59.044 45.455 0.00 0.00 0.00 4.83
4290 5421 2.480555 GCCATGTTTCCGACGCAG 59.519 61.111 0.00 0.00 0.00 5.18
4319 5450 4.411540 ACAGACAGGAATTCAGGATATGCT 59.588 41.667 7.93 0.00 0.00 3.79
4355 5489 2.770048 CATCCCTCCCCGCCTTCT 60.770 66.667 0.00 0.00 0.00 2.85
4412 5547 2.594214 TCCGACGATACGATACGATACG 59.406 50.000 0.00 0.00 35.09 3.06
4413 5548 4.568229 TTCCGACGATACGATACGATAC 57.432 45.455 0.00 0.00 35.09 2.24
4414 5549 4.864247 TGATTCCGACGATACGATACGATA 59.136 41.667 0.00 0.00 35.09 2.92
4415 5550 3.681417 TGATTCCGACGATACGATACGAT 59.319 43.478 0.00 0.00 35.09 3.73
4416 5551 3.059166 TGATTCCGACGATACGATACGA 58.941 45.455 0.00 0.00 35.09 3.43
4529 5664 0.409092 TGGCACATCCACCCTCATTT 59.591 50.000 0.00 0.00 40.72 2.32
4531 5666 3.839589 TGGCACATCCACCCTCAT 58.160 55.556 0.00 0.00 40.72 2.90
4557 5692 4.659172 TTGTCCTTGCCTGGCCCG 62.659 66.667 17.53 6.78 0.00 6.13
4558 5693 2.677875 CTTGTCCTTGCCTGGCCC 60.678 66.667 17.53 0.00 0.00 5.80
4559 5694 2.116125 ACTTGTCCTTGCCTGGCC 59.884 61.111 17.53 0.00 0.00 5.36
4560 5695 2.924105 GCACTTGTCCTTGCCTGGC 61.924 63.158 12.87 12.87 32.21 4.85
4561 5696 1.521450 CTGCACTTGTCCTTGCCTGG 61.521 60.000 0.00 0.00 38.00 4.45
4562 5697 0.535780 TCTGCACTTGTCCTTGCCTG 60.536 55.000 0.00 0.00 38.00 4.85
4563 5698 0.536006 GTCTGCACTTGTCCTTGCCT 60.536 55.000 0.00 0.00 38.00 4.75
4564 5699 1.845809 CGTCTGCACTTGTCCTTGCC 61.846 60.000 0.00 0.00 38.00 4.52
4565 5700 1.160329 ACGTCTGCACTTGTCCTTGC 61.160 55.000 0.00 0.00 39.33 4.01
4566 5701 0.861837 GACGTCTGCACTTGTCCTTG 59.138 55.000 8.70 0.00 0.00 3.61
4567 5702 0.753262 AGACGTCTGCACTTGTCCTT 59.247 50.000 19.30 0.00 31.75 3.36
4568 5703 0.315568 GAGACGTCTGCACTTGTCCT 59.684 55.000 25.58 0.00 31.75 3.85
4569 5704 1.004277 CGAGACGTCTGCACTTGTCC 61.004 60.000 25.58 3.76 31.75 4.02
4570 5705 0.040336 TCGAGACGTCTGCACTTGTC 60.040 55.000 25.58 4.86 0.00 3.18
4571 5706 0.598562 ATCGAGACGTCTGCACTTGT 59.401 50.000 25.58 0.00 0.00 3.16
4572 5707 1.263776 GATCGAGACGTCTGCACTTG 58.736 55.000 25.58 2.34 0.00 3.16
4573 5708 0.171455 GGATCGAGACGTCTGCACTT 59.829 55.000 25.58 2.61 0.00 3.16
4574 5709 0.678366 AGGATCGAGACGTCTGCACT 60.678 55.000 25.58 10.67 0.00 4.40
4575 5710 0.248296 GAGGATCGAGACGTCTGCAC 60.248 60.000 25.58 7.83 0.00 4.57
4576 5711 1.377366 GGAGGATCGAGACGTCTGCA 61.377 60.000 25.58 9.34 34.37 4.41
4577 5712 1.357334 GGAGGATCGAGACGTCTGC 59.643 63.158 25.58 13.44 34.37 4.26
4578 5713 1.644372 CGGAGGATCGAGACGTCTG 59.356 63.158 25.58 15.21 34.37 3.51
4579 5714 2.181521 GCGGAGGATCGAGACGTCT 61.182 63.158 20.18 20.18 34.37 4.18
4580 5715 2.108344 GAGCGGAGGATCGAGACGTC 62.108 65.000 7.70 7.70 34.37 4.34
4581 5716 2.124653 AGCGGAGGATCGAGACGT 60.125 61.111 0.00 0.00 34.37 4.34
4582 5717 2.634777 GAGCGGAGGATCGAGACG 59.365 66.667 0.00 0.00 34.37 4.18
4583 5718 2.899044 CGGAGCGGAGGATCGAGAC 61.899 68.421 0.00 0.00 34.37 3.36
4584 5719 2.592001 CGGAGCGGAGGATCGAGA 60.592 66.667 0.00 0.00 34.37 4.04
4585 5720 2.902846 ACGGAGCGGAGGATCGAG 60.903 66.667 0.00 0.00 34.37 4.04
4586 5721 3.209812 CACGGAGCGGAGGATCGA 61.210 66.667 0.00 0.00 34.37 3.59
4587 5722 3.471244 GACACGGAGCGGAGGATCG 62.471 68.421 0.00 0.00 34.37 3.69
4588 5723 2.413765 GACACGGAGCGGAGGATC 59.586 66.667 0.00 0.00 0.00 3.36
4589 5724 3.148279 GGACACGGAGCGGAGGAT 61.148 66.667 0.00 0.00 0.00 3.24
4597 5732 3.900892 ATAGGCGCGGACACGGAG 61.901 66.667 8.83 0.00 41.36 4.63
4598 5733 4.201679 CATAGGCGCGGACACGGA 62.202 66.667 8.83 0.00 41.36 4.69
4601 5736 2.395360 TTTGCATAGGCGCGGACAC 61.395 57.895 8.83 0.00 45.35 3.67
4602 5737 2.046796 TTTGCATAGGCGCGGACA 60.047 55.556 8.83 0.00 45.35 4.02
4603 5738 2.403586 GTTTGCATAGGCGCGGAC 59.596 61.111 8.83 0.00 45.35 4.79
4604 5739 2.822255 GGTTTGCATAGGCGCGGA 60.822 61.111 8.83 0.00 45.35 5.54
4605 5740 4.236416 CGGTTTGCATAGGCGCGG 62.236 66.667 8.83 0.00 45.35 6.46
4606 5741 4.236416 CCGGTTTGCATAGGCGCG 62.236 66.667 0.00 0.00 45.35 6.86
4607 5742 2.822255 TCCGGTTTGCATAGGCGC 60.822 61.111 0.00 0.00 45.35 6.53
4608 5743 1.429148 GAGTCCGGTTTGCATAGGCG 61.429 60.000 0.00 0.00 45.35 5.52
4609 5744 0.392461 TGAGTCCGGTTTGCATAGGC 60.392 55.000 0.00 0.00 41.68 3.93
4610 5745 2.107950 TTGAGTCCGGTTTGCATAGG 57.892 50.000 0.00 0.00 0.00 2.57
4611 5746 4.701956 AATTTGAGTCCGGTTTGCATAG 57.298 40.909 0.00 0.00 0.00 2.23
4612 5747 5.010112 TCAAAATTTGAGTCCGGTTTGCATA 59.990 36.000 4.03 0.00 34.08 3.14
4613 5748 4.057432 CAAAATTTGAGTCCGGTTTGCAT 58.943 39.130 0.00 0.00 0.00 3.96
4614 5749 3.131223 TCAAAATTTGAGTCCGGTTTGCA 59.869 39.130 4.03 0.00 34.08 4.08
4615 5750 3.712187 TCAAAATTTGAGTCCGGTTTGC 58.288 40.909 4.03 0.00 34.08 3.68
4626 5761 6.248433 ACTCTATTCCAGGCTCAAAATTTGA 58.752 36.000 8.25 8.25 38.17 2.69
4627 5762 6.151648 TGACTCTATTCCAGGCTCAAAATTTG 59.848 38.462 0.00 0.00 0.00 2.32
4628 5763 6.248433 TGACTCTATTCCAGGCTCAAAATTT 58.752 36.000 0.00 0.00 0.00 1.82
4629 5764 5.819991 TGACTCTATTCCAGGCTCAAAATT 58.180 37.500 0.00 0.00 0.00 1.82
4630 5765 5.441718 TGACTCTATTCCAGGCTCAAAAT 57.558 39.130 0.00 0.00 0.00 1.82
4631 5766 4.908601 TGACTCTATTCCAGGCTCAAAA 57.091 40.909 0.00 0.00 0.00 2.44
4632 5767 5.899547 TCTATGACTCTATTCCAGGCTCAAA 59.100 40.000 0.00 0.00 0.00 2.69
4633 5768 5.303078 GTCTATGACTCTATTCCAGGCTCAA 59.697 44.000 0.00 0.00 0.00 3.02
4634 5769 4.830046 GTCTATGACTCTATTCCAGGCTCA 59.170 45.833 0.00 0.00 0.00 4.26
4635 5770 4.219725 GGTCTATGACTCTATTCCAGGCTC 59.780 50.000 0.00 0.00 32.47 4.70
4636 5771 4.156477 GGTCTATGACTCTATTCCAGGCT 58.844 47.826 0.00 0.00 32.47 4.58
4637 5772 3.259625 GGGTCTATGACTCTATTCCAGGC 59.740 52.174 0.00 0.00 32.47 4.85
4638 5773 3.835395 GGGGTCTATGACTCTATTCCAGG 59.165 52.174 0.00 0.00 32.87 4.45
4639 5774 3.508012 CGGGGTCTATGACTCTATTCCAG 59.492 52.174 0.00 0.00 32.87 3.86
4640 5775 3.117246 ACGGGGTCTATGACTCTATTCCA 60.117 47.826 0.00 0.00 32.87 3.53
4641 5776 3.256136 CACGGGGTCTATGACTCTATTCC 59.744 52.174 0.00 0.00 32.87 3.01
4642 5777 3.305471 GCACGGGGTCTATGACTCTATTC 60.305 52.174 0.00 0.00 32.87 1.75
4643 5778 2.628657 GCACGGGGTCTATGACTCTATT 59.371 50.000 0.00 0.00 32.87 1.73
4644 5779 2.240279 GCACGGGGTCTATGACTCTAT 58.760 52.381 0.00 0.00 32.87 1.98
4645 5780 1.688772 GCACGGGGTCTATGACTCTA 58.311 55.000 0.00 0.00 32.87 2.43
4646 5781 1.384989 CGCACGGGGTCTATGACTCT 61.385 60.000 0.00 0.00 32.87 3.24
4647 5782 1.065928 CGCACGGGGTCTATGACTC 59.934 63.158 0.00 0.00 32.47 3.36
4648 5783 2.423898 CCGCACGGGGTCTATGACT 61.424 63.158 0.00 0.00 32.47 3.41
4649 5784 1.745320 ATCCGCACGGGGTCTATGAC 61.745 60.000 9.58 0.00 36.01 3.06
4650 5785 0.178984 TATCCGCACGGGGTCTATGA 60.179 55.000 9.58 0.00 36.01 2.15
4651 5786 0.677288 TTATCCGCACGGGGTCTATG 59.323 55.000 9.58 0.00 36.01 2.23
4652 5787 1.416243 TTTATCCGCACGGGGTCTAT 58.584 50.000 9.58 0.00 36.01 1.98
4653 5788 1.193323 TTTTATCCGCACGGGGTCTA 58.807 50.000 9.58 0.00 36.01 2.59
4654 5789 0.325602 TTTTTATCCGCACGGGGTCT 59.674 50.000 9.58 0.00 36.01 3.85
4655 5790 2.857254 TTTTTATCCGCACGGGGTC 58.143 52.632 9.58 0.00 36.01 4.46
4670 5805 6.121590 TCGTTTAGGTCCAAACTACCTTTTT 58.878 36.000 0.00 0.00 45.26 1.94
4671 5806 5.683681 TCGTTTAGGTCCAAACTACCTTTT 58.316 37.500 0.00 0.00 45.26 2.27
4672 5807 5.294734 TCGTTTAGGTCCAAACTACCTTT 57.705 39.130 0.00 0.00 45.26 3.11
4673 5808 4.961438 TCGTTTAGGTCCAAACTACCTT 57.039 40.909 0.00 0.00 45.26 3.50
4675 5810 4.379652 TGTTCGTTTAGGTCCAAACTACC 58.620 43.478 12.28 0.00 36.46 3.18
4676 5811 5.052481 ACTGTTCGTTTAGGTCCAAACTAC 58.948 41.667 12.28 10.75 36.46 2.73
4677 5812 5.280654 ACTGTTCGTTTAGGTCCAAACTA 57.719 39.130 12.28 2.82 36.46 2.24
4678 5813 4.146745 ACTGTTCGTTTAGGTCCAAACT 57.853 40.909 12.28 0.00 36.46 2.66
4679 5814 4.888038 AACTGTTCGTTTAGGTCCAAAC 57.112 40.909 0.00 0.00 35.49 2.93
4680 5815 4.439016 GCAAACTGTTCGTTTAGGTCCAAA 60.439 41.667 0.00 0.00 43.75 3.28
4681 5816 3.065648 GCAAACTGTTCGTTTAGGTCCAA 59.934 43.478 0.00 0.00 43.75 3.53
4682 5817 2.614983 GCAAACTGTTCGTTTAGGTCCA 59.385 45.455 0.00 0.00 43.75 4.02
4683 5818 2.349155 CGCAAACTGTTCGTTTAGGTCC 60.349 50.000 0.00 0.00 43.75 4.46
4684 5819 2.286025 ACGCAAACTGTTCGTTTAGGTC 59.714 45.455 1.93 0.00 43.75 3.85
4685 5820 2.282407 ACGCAAACTGTTCGTTTAGGT 58.718 42.857 1.93 0.00 43.75 3.08
4686 5821 3.033185 CAACGCAAACTGTTCGTTTAGG 58.967 45.455 14.77 4.01 43.75 2.69
4687 5822 3.676540 ACAACGCAAACTGTTCGTTTAG 58.323 40.909 14.77 9.20 43.75 1.85
4688 5823 3.743567 ACAACGCAAACTGTTCGTTTA 57.256 38.095 14.77 0.00 43.75 2.01
4689 5824 2.622546 ACAACGCAAACTGTTCGTTT 57.377 40.000 14.77 6.76 46.41 3.60
4690 5825 2.246789 CAACAACGCAAACTGTTCGTT 58.753 42.857 12.46 12.46 45.77 3.85
4691 5826 1.466697 CCAACAACGCAAACTGTTCGT 60.467 47.619 1.93 1.93 33.51 3.85
4692 5827 1.187715 CCAACAACGCAAACTGTTCG 58.812 50.000 0.00 0.00 33.51 3.95
4693 5828 0.920664 GCCAACAACGCAAACTGTTC 59.079 50.000 0.00 0.00 33.51 3.18
4694 5829 0.800300 CGCCAACAACGCAAACTGTT 60.800 50.000 0.00 0.00 36.19 3.16
4695 5830 1.226547 CGCCAACAACGCAAACTGT 60.227 52.632 0.00 0.00 0.00 3.55
4696 5831 3.599568 CGCCAACAACGCAAACTG 58.400 55.556 0.00 0.00 0.00 3.16
4703 5838 1.370414 CTCAAAGGCGCCAACAACG 60.370 57.895 31.54 10.62 0.00 4.10
4704 5839 0.102300 AACTCAAAGGCGCCAACAAC 59.898 50.000 31.54 0.00 0.00 3.32
4705 5840 0.102120 CAACTCAAAGGCGCCAACAA 59.898 50.000 31.54 10.46 0.00 2.83
4706 5841 1.732917 CAACTCAAAGGCGCCAACA 59.267 52.632 31.54 8.31 0.00 3.33
4707 5842 1.661509 GCAACTCAAAGGCGCCAAC 60.662 57.895 31.54 0.33 0.00 3.77
4708 5843 1.795170 GAGCAACTCAAAGGCGCCAA 61.795 55.000 31.54 10.06 0.00 4.52
4709 5844 2.203337 AGCAACTCAAAGGCGCCA 60.203 55.556 31.54 6.61 0.00 5.69
4710 5845 1.968540 AGAGCAACTCAAAGGCGCC 60.969 57.895 21.89 21.89 32.06 6.53
4711 5846 3.660621 AGAGCAACTCAAAGGCGC 58.339 55.556 0.00 0.00 32.06 6.53


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.