Multiple sequence alignment - TraesCS7B01G323000
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7B01G323000 | chr7B | 100.000 | 2241 | 0 | 0 | 451 | 2691 | 573793465 | 573791225 | 0.000000e+00 | 4139.0 |
1 | TraesCS7B01G323000 | chr7B | 100.000 | 554 | 0 | 0 | 2914 | 3467 | 573791002 | 573790449 | 0.000000e+00 | 1024.0 |
2 | TraesCS7B01G323000 | chr7B | 100.000 | 204 | 0 | 0 | 1 | 204 | 573793915 | 573793712 | 9.080000e-101 | 377.0 |
3 | TraesCS7B01G323000 | chr7D | 95.184 | 1682 | 69 | 3 | 960 | 2632 | 533636181 | 533634503 | 0.000000e+00 | 2647.0 |
4 | TraesCS7B01G323000 | chr7D | 90.732 | 205 | 14 | 4 | 1 | 203 | 533636818 | 533636617 | 5.700000e-68 | 268.0 |
5 | TraesCS7B01G323000 | chr7D | 88.889 | 63 | 7 | 0 | 3044 | 3106 | 550547427 | 550547365 | 1.030000e-10 | 78.7 |
6 | TraesCS7B01G323000 | chr7A | 95.680 | 1551 | 55 | 4 | 960 | 2498 | 613026097 | 613024547 | 0.000000e+00 | 2483.0 |
7 | TraesCS7B01G323000 | chr7A | 91.525 | 177 | 13 | 2 | 26 | 202 | 613026653 | 613026479 | 3.460000e-60 | 243.0 |
8 | TraesCS7B01G323000 | chr7A | 86.286 | 175 | 16 | 3 | 2337 | 2511 | 613022609 | 613022443 | 2.130000e-42 | 183.0 |
9 | TraesCS7B01G323000 | chr7A | 81.308 | 107 | 15 | 5 | 616 | 721 | 566510801 | 566510903 | 7.980000e-12 | 82.4 |
10 | TraesCS7B01G323000 | chr7A | 95.652 | 46 | 1 | 1 | 813 | 857 | 681696737 | 681696782 | 4.800000e-09 | 73.1 |
11 | TraesCS7B01G323000 | chr6B | 83.106 | 367 | 58 | 2 | 3105 | 3467 | 706516680 | 706517046 | 7.170000e-87 | 331.0 |
12 | TraesCS7B01G323000 | chr6B | 80.965 | 373 | 57 | 12 | 3105 | 3467 | 124543226 | 124543594 | 2.040000e-72 | 283.0 |
13 | TraesCS7B01G323000 | chr6B | 80.109 | 367 | 65 | 5 | 3105 | 3467 | 637933140 | 637933502 | 2.050000e-67 | 267.0 |
14 | TraesCS7B01G323000 | chr5B | 82.656 | 369 | 51 | 10 | 3105 | 3467 | 674426434 | 674426795 | 7.220000e-82 | 315.0 |
15 | TraesCS7B01G323000 | chr5B | 82.016 | 367 | 62 | 3 | 3105 | 3467 | 617670742 | 617670376 | 3.360000e-80 | 309.0 |
16 | TraesCS7B01G323000 | chr1B | 81.522 | 368 | 60 | 6 | 3105 | 3467 | 600980422 | 600980058 | 2.620000e-76 | 296.0 |
17 | TraesCS7B01G323000 | chr1B | 85.864 | 191 | 20 | 6 | 617 | 807 | 94949808 | 94949625 | 2.730000e-46 | 196.0 |
18 | TraesCS7B01G323000 | chr1B | 83.893 | 149 | 23 | 1 | 616 | 764 | 513409284 | 513409431 | 1.300000e-29 | 141.0 |
19 | TraesCS7B01G323000 | chr1B | 94.643 | 56 | 2 | 1 | 812 | 866 | 513427721 | 513427776 | 6.170000e-13 | 86.1 |
20 | TraesCS7B01G323000 | chr3B | 81.471 | 367 | 61 | 5 | 3105 | 3467 | 744218086 | 744217723 | 9.410000e-76 | 294.0 |
21 | TraesCS7B01G323000 | chr3B | 82.474 | 97 | 13 | 4 | 626 | 721 | 625211462 | 625211369 | 7.980000e-12 | 82.4 |
22 | TraesCS7B01G323000 | chr6D | 79.157 | 427 | 71 | 11 | 3042 | 3455 | 6830520 | 6830941 | 2.630000e-71 | 279.0 |
23 | TraesCS7B01G323000 | chr3D | 80.109 | 367 | 65 | 5 | 3105 | 3467 | 588200998 | 588201360 | 2.050000e-67 | 267.0 |
24 | TraesCS7B01G323000 | chr3D | 86.905 | 84 | 10 | 1 | 3024 | 3106 | 367333770 | 367333853 | 3.680000e-15 | 93.5 |
25 | TraesCS7B01G323000 | chr2B | 81.865 | 193 | 26 | 9 | 615 | 801 | 647635166 | 647634977 | 1.670000e-33 | 154.0 |
26 | TraesCS7B01G323000 | chr5D | 83.478 | 115 | 17 | 2 | 2552 | 2666 | 294416853 | 294416741 | 4.730000e-19 | 106.0 |
27 | TraesCS7B01G323000 | chr5D | 95.000 | 60 | 1 | 2 | 812 | 870 | 531991414 | 531991472 | 3.680000e-15 | 93.5 |
28 | TraesCS7B01G323000 | chr5D | 84.783 | 92 | 7 | 7 | 617 | 706 | 544235359 | 544235445 | 6.170000e-13 | 86.1 |
29 | TraesCS7B01G323000 | chr2A | 89.286 | 84 | 6 | 3 | 3025 | 3106 | 457224351 | 457224433 | 6.120000e-18 | 102.0 |
30 | TraesCS7B01G323000 | chr4A | 90.278 | 72 | 7 | 0 | 3035 | 3106 | 654062388 | 654062317 | 1.020000e-15 | 95.3 |
31 | TraesCS7B01G323000 | chr3A | 86.905 | 84 | 10 | 1 | 3024 | 3106 | 648739627 | 648739544 | 3.680000e-15 | 93.5 |
32 | TraesCS7B01G323000 | chrUn | 88.732 | 71 | 8 | 0 | 3035 | 3105 | 134264143 | 134264073 | 1.710000e-13 | 87.9 |
33 | TraesCS7B01G323000 | chr1D | 94.643 | 56 | 2 | 1 | 813 | 867 | 249744487 | 249744542 | 6.170000e-13 | 86.1 |
34 | TraesCS7B01G323000 | chr1D | 81.250 | 112 | 15 | 6 | 615 | 724 | 430428861 | 430428754 | 6.170000e-13 | 86.1 |
35 | TraesCS7B01G323000 | chr1D | 87.324 | 71 | 7 | 2 | 3023 | 3091 | 9827431 | 9827501 | 2.870000e-11 | 80.5 |
36 | TraesCS7B01G323000 | chr5A | 86.486 | 74 | 9 | 1 | 3010 | 3082 | 311985682 | 311985609 | 2.870000e-11 | 80.5 |
37 | TraesCS7B01G323000 | chr4D | 92.157 | 51 | 4 | 0 | 3051 | 3101 | 82327067 | 82327117 | 4.800000e-09 | 73.1 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7B01G323000 | chr7B | 573790449 | 573793915 | 3466 | True | 1846.666667 | 4139 | 100.000000 | 1 | 3467 | 3 | chr7B.!!$R1 | 3466 |
1 | TraesCS7B01G323000 | chr7D | 533634503 | 533636818 | 2315 | True | 1457.500000 | 2647 | 92.958000 | 1 | 2632 | 2 | chr7D.!!$R2 | 2631 |
2 | TraesCS7B01G323000 | chr7A | 613022443 | 613026653 | 4210 | True | 969.666667 | 2483 | 91.163667 | 26 | 2511 | 3 | chr7A.!!$R1 | 2485 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
732 | 734 | 0.033504 | GCCGAAGACAGTGTCCTCAA | 59.966 | 55.0 | 19.71 | 0.0 | 32.18 | 3.02 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2590 | 3110 | 0.461163 | GCGAGCTCTTTCCTTCCCTC | 60.461 | 60.0 | 12.85 | 0.0 | 0.0 | 4.3 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
28 | 30 | 8.763356 | GTCATGCAAAAACAGATAAATTTGTCA | 58.237 | 29.630 | 16.15 | 0.00 | 35.68 | 3.58 |
114 | 116 | 3.648339 | AAAAATTGTCGCACTGCAGAT | 57.352 | 38.095 | 23.35 | 1.19 | 0.00 | 2.90 |
138 | 140 | 5.452078 | AATTCTCATGCGTTTTCAAGGAA | 57.548 | 34.783 | 0.00 | 0.00 | 0.00 | 3.36 |
150 | 152 | 6.098679 | CGTTTTCAAGGAATTGCCATGATTA | 58.901 | 36.000 | 0.00 | 0.00 | 43.38 | 1.75 |
152 | 154 | 4.898829 | TCAAGGAATTGCCATGATTACG | 57.101 | 40.909 | 0.00 | 0.00 | 39.34 | 3.18 |
176 | 178 | 6.029346 | ACATGGAGAATTGTAAGCCAAAAG | 57.971 | 37.500 | 0.00 | 0.00 | 36.44 | 2.27 |
203 | 205 | 6.854778 | ACAAAATATTGAAAATTGCCATGGC | 58.145 | 32.000 | 30.54 | 30.54 | 38.94 | 4.40 |
492 | 494 | 5.619220 | ACTATCGTTATCTCGTAGTTCCCT | 58.381 | 41.667 | 0.00 | 0.00 | 30.30 | 4.20 |
500 | 502 | 3.090037 | TCTCGTAGTTCCCTCAAAGGAG | 58.910 | 50.000 | 0.00 | 0.00 | 37.67 | 3.69 |
527 | 529 | 7.225341 | GCATTTGAAACAAAAACTTCAGGATCT | 59.775 | 33.333 | 0.00 | 0.00 | 33.30 | 2.75 |
528 | 530 | 9.748708 | CATTTGAAACAAAAACTTCAGGATCTA | 57.251 | 29.630 | 0.00 | 0.00 | 33.30 | 1.98 |
531 | 533 | 8.690203 | TGAAACAAAAACTTCAGGATCTATGA | 57.310 | 30.769 | 0.00 | 0.00 | 0.00 | 2.15 |
532 | 534 | 8.567948 | TGAAACAAAAACTTCAGGATCTATGAC | 58.432 | 33.333 | 0.00 | 0.00 | 0.00 | 3.06 |
534 | 536 | 5.946377 | ACAAAAACTTCAGGATCTATGACCC | 59.054 | 40.000 | 0.00 | 0.00 | 0.00 | 4.46 |
540 | 542 | 2.965831 | TCAGGATCTATGACCCGGAAAG | 59.034 | 50.000 | 0.73 | 0.00 | 0.00 | 2.62 |
558 | 560 | 3.414700 | GACGTGCAAGAGGCCGTG | 61.415 | 66.667 | 6.65 | 0.00 | 45.20 | 4.94 |
559 | 561 | 4.988598 | ACGTGCAAGAGGCCGTGG | 62.989 | 66.667 | 6.65 | 0.00 | 44.12 | 4.94 |
563 | 565 | 4.752879 | GCAAGAGGCCGTGGCGTA | 62.753 | 66.667 | 6.00 | 0.00 | 43.06 | 4.42 |
564 | 566 | 2.509336 | CAAGAGGCCGTGGCGTAG | 60.509 | 66.667 | 6.00 | 0.00 | 43.06 | 3.51 |
565 | 567 | 2.678934 | AAGAGGCCGTGGCGTAGA | 60.679 | 61.111 | 6.00 | 0.00 | 43.06 | 2.59 |
594 | 596 | 9.745018 | AATTCTTCAAAATCTGATACTTCCTGA | 57.255 | 29.630 | 0.00 | 0.00 | 32.78 | 3.86 |
611 | 613 | 5.739752 | TCCTGAATACATTCATTTGAGCG | 57.260 | 39.130 | 5.16 | 0.00 | 44.92 | 5.03 |
612 | 614 | 5.427378 | TCCTGAATACATTCATTTGAGCGA | 58.573 | 37.500 | 5.16 | 0.00 | 44.92 | 4.93 |
613 | 615 | 6.057533 | TCCTGAATACATTCATTTGAGCGAT | 58.942 | 36.000 | 5.16 | 0.00 | 44.92 | 4.58 |
614 | 616 | 6.543465 | TCCTGAATACATTCATTTGAGCGATT | 59.457 | 34.615 | 5.16 | 0.00 | 44.92 | 3.34 |
615 | 617 | 7.067372 | TCCTGAATACATTCATTTGAGCGATTT | 59.933 | 33.333 | 5.16 | 0.00 | 44.92 | 2.17 |
616 | 618 | 7.703621 | CCTGAATACATTCATTTGAGCGATTTT | 59.296 | 33.333 | 5.16 | 0.00 | 44.92 | 1.82 |
617 | 619 | 8.984891 | TGAATACATTCATTTGAGCGATTTTT | 57.015 | 26.923 | 0.45 | 0.00 | 41.51 | 1.94 |
653 | 655 | 9.950680 | ACTATCATGGTTTTTATAGCAAATTCG | 57.049 | 29.630 | 0.00 | 0.00 | 0.00 | 3.34 |
654 | 656 | 9.398170 | CTATCATGGTTTTTATAGCAAATTCGG | 57.602 | 33.333 | 0.00 | 0.00 | 0.00 | 4.30 |
655 | 657 | 7.397892 | TCATGGTTTTTATAGCAAATTCGGA | 57.602 | 32.000 | 0.00 | 0.00 | 0.00 | 4.55 |
656 | 658 | 7.831753 | TCATGGTTTTTATAGCAAATTCGGAA | 58.168 | 30.769 | 0.00 | 0.00 | 0.00 | 4.30 |
657 | 659 | 8.307483 | TCATGGTTTTTATAGCAAATTCGGAAA | 58.693 | 29.630 | 0.00 | 0.00 | 0.00 | 3.13 |
658 | 660 | 7.876896 | TGGTTTTTATAGCAAATTCGGAAAC | 57.123 | 32.000 | 0.00 | 0.00 | 0.00 | 2.78 |
659 | 661 | 7.662897 | TGGTTTTTATAGCAAATTCGGAAACT | 58.337 | 30.769 | 0.00 | 0.00 | 0.00 | 2.66 |
660 | 662 | 8.794553 | TGGTTTTTATAGCAAATTCGGAAACTA | 58.205 | 29.630 | 0.00 | 0.00 | 0.00 | 2.24 |
661 | 663 | 9.797556 | GGTTTTTATAGCAAATTCGGAAACTAT | 57.202 | 29.630 | 0.00 | 3.39 | 0.00 | 2.12 |
667 | 669 | 6.619801 | AGCAAATTCGGAAACTATATCACC | 57.380 | 37.500 | 0.00 | 0.00 | 0.00 | 4.02 |
668 | 670 | 6.357367 | AGCAAATTCGGAAACTATATCACCT | 58.643 | 36.000 | 0.00 | 0.00 | 0.00 | 4.00 |
669 | 671 | 6.260936 | AGCAAATTCGGAAACTATATCACCTG | 59.739 | 38.462 | 0.00 | 0.00 | 0.00 | 4.00 |
670 | 672 | 6.260050 | GCAAATTCGGAAACTATATCACCTGA | 59.740 | 38.462 | 0.00 | 0.00 | 0.00 | 3.86 |
671 | 673 | 7.201696 | GCAAATTCGGAAACTATATCACCTGAA | 60.202 | 37.037 | 0.00 | 0.00 | 0.00 | 3.02 |
672 | 674 | 8.338259 | CAAATTCGGAAACTATATCACCTGAAG | 58.662 | 37.037 | 0.00 | 0.00 | 0.00 | 3.02 |
673 | 675 | 6.540438 | TTCGGAAACTATATCACCTGAAGT | 57.460 | 37.500 | 0.00 | 0.00 | 0.00 | 3.01 |
674 | 676 | 7.649533 | TTCGGAAACTATATCACCTGAAGTA | 57.350 | 36.000 | 0.00 | 0.00 | 0.00 | 2.24 |
675 | 677 | 7.649533 | TCGGAAACTATATCACCTGAAGTAA | 57.350 | 36.000 | 0.00 | 0.00 | 0.00 | 2.24 |
676 | 678 | 8.070034 | TCGGAAACTATATCACCTGAAGTAAA | 57.930 | 34.615 | 0.00 | 0.00 | 0.00 | 2.01 |
677 | 679 | 8.533657 | TCGGAAACTATATCACCTGAAGTAAAA | 58.466 | 33.333 | 0.00 | 0.00 | 0.00 | 1.52 |
678 | 680 | 9.158233 | CGGAAACTATATCACCTGAAGTAAAAA | 57.842 | 33.333 | 0.00 | 0.00 | 0.00 | 1.94 |
697 | 699 | 2.215942 | AAACACAGAACTATGCCCCC | 57.784 | 50.000 | 0.00 | 0.00 | 0.00 | 5.40 |
698 | 700 | 0.035439 | AACACAGAACTATGCCCCCG | 60.035 | 55.000 | 0.00 | 0.00 | 0.00 | 5.73 |
699 | 701 | 1.198759 | ACACAGAACTATGCCCCCGT | 61.199 | 55.000 | 0.00 | 0.00 | 0.00 | 5.28 |
700 | 702 | 0.462047 | CACAGAACTATGCCCCCGTC | 60.462 | 60.000 | 0.00 | 0.00 | 0.00 | 4.79 |
701 | 703 | 1.227263 | CAGAACTATGCCCCCGTCG | 60.227 | 63.158 | 0.00 | 0.00 | 0.00 | 5.12 |
702 | 704 | 2.108362 | GAACTATGCCCCCGTCGG | 59.892 | 66.667 | 3.60 | 3.60 | 0.00 | 4.79 |
720 | 722 | 4.697756 | CCTTGCGTGGGCCGAAGA | 62.698 | 66.667 | 4.57 | 0.00 | 39.56 | 2.87 |
721 | 723 | 3.423154 | CTTGCGTGGGCCGAAGAC | 61.423 | 66.667 | 4.57 | 0.00 | 39.56 | 3.01 |
722 | 724 | 4.243008 | TTGCGTGGGCCGAAGACA | 62.243 | 61.111 | 4.57 | 0.00 | 39.56 | 3.41 |
723 | 725 | 4.680237 | TGCGTGGGCCGAAGACAG | 62.680 | 66.667 | 4.57 | 0.00 | 39.56 | 3.51 |
724 | 726 | 4.681978 | GCGTGGGCCGAAGACAGT | 62.682 | 66.667 | 4.57 | 0.00 | 39.56 | 3.55 |
725 | 727 | 2.738521 | CGTGGGCCGAAGACAGTG | 60.739 | 66.667 | 0.00 | 0.00 | 39.56 | 3.66 |
726 | 728 | 2.426023 | GTGGGCCGAAGACAGTGT | 59.574 | 61.111 | 0.00 | 0.00 | 0.00 | 3.55 |
727 | 729 | 1.668151 | GTGGGCCGAAGACAGTGTC | 60.668 | 63.158 | 15.78 | 15.78 | 0.00 | 3.67 |
728 | 730 | 2.047179 | GGGCCGAAGACAGTGTCC | 60.047 | 66.667 | 19.71 | 3.71 | 32.18 | 4.02 |
729 | 731 | 2.584391 | GGGCCGAAGACAGTGTCCT | 61.584 | 63.158 | 19.71 | 6.91 | 32.18 | 3.85 |
730 | 732 | 1.079750 | GGCCGAAGACAGTGTCCTC | 60.080 | 63.158 | 19.71 | 15.26 | 32.18 | 3.71 |
731 | 733 | 1.666011 | GCCGAAGACAGTGTCCTCA | 59.334 | 57.895 | 19.71 | 0.00 | 32.18 | 3.86 |
732 | 734 | 0.033504 | GCCGAAGACAGTGTCCTCAA | 59.966 | 55.000 | 19.71 | 0.00 | 32.18 | 3.02 |
733 | 735 | 1.338200 | GCCGAAGACAGTGTCCTCAAT | 60.338 | 52.381 | 19.71 | 0.00 | 32.18 | 2.57 |
734 | 736 | 2.872038 | GCCGAAGACAGTGTCCTCAATT | 60.872 | 50.000 | 19.71 | 7.03 | 32.18 | 2.32 |
735 | 737 | 3.616560 | GCCGAAGACAGTGTCCTCAATTA | 60.617 | 47.826 | 19.71 | 0.00 | 32.18 | 1.40 |
736 | 738 | 4.177026 | CCGAAGACAGTGTCCTCAATTAG | 58.823 | 47.826 | 19.71 | 7.38 | 32.18 | 1.73 |
737 | 739 | 4.322049 | CCGAAGACAGTGTCCTCAATTAGT | 60.322 | 45.833 | 19.71 | 0.00 | 32.18 | 2.24 |
738 | 740 | 5.230942 | CGAAGACAGTGTCCTCAATTAGTT | 58.769 | 41.667 | 19.71 | 4.05 | 32.18 | 2.24 |
739 | 741 | 5.119279 | CGAAGACAGTGTCCTCAATTAGTTG | 59.881 | 44.000 | 19.71 | 0.00 | 33.18 | 3.16 |
740 | 742 | 5.552870 | AGACAGTGTCCTCAATTAGTTGT | 57.447 | 39.130 | 19.71 | 0.00 | 33.45 | 3.32 |
741 | 743 | 5.930135 | AGACAGTGTCCTCAATTAGTTGTT | 58.070 | 37.500 | 19.71 | 0.00 | 33.45 | 2.83 |
742 | 744 | 5.760253 | AGACAGTGTCCTCAATTAGTTGTTG | 59.240 | 40.000 | 19.71 | 0.00 | 33.45 | 3.33 |
743 | 745 | 4.821805 | ACAGTGTCCTCAATTAGTTGTTGG | 59.178 | 41.667 | 0.00 | 2.82 | 36.69 | 3.77 |
744 | 746 | 3.821033 | AGTGTCCTCAATTAGTTGTTGGC | 59.179 | 43.478 | 0.00 | 0.00 | 36.69 | 4.52 |
745 | 747 | 3.057526 | GTGTCCTCAATTAGTTGTTGGCC | 60.058 | 47.826 | 0.00 | 0.00 | 36.69 | 5.36 |
746 | 748 | 2.161609 | GTCCTCAATTAGTTGTTGGCCG | 59.838 | 50.000 | 0.00 | 0.00 | 36.69 | 6.13 |
747 | 749 | 2.039216 | TCCTCAATTAGTTGTTGGCCGA | 59.961 | 45.455 | 0.00 | 0.00 | 36.69 | 5.54 |
748 | 750 | 2.817258 | CCTCAATTAGTTGTTGGCCGAA | 59.183 | 45.455 | 0.00 | 0.00 | 36.69 | 4.30 |
749 | 751 | 3.254657 | CCTCAATTAGTTGTTGGCCGAAA | 59.745 | 43.478 | 0.00 | 0.00 | 36.69 | 3.46 |
750 | 752 | 4.261825 | CCTCAATTAGTTGTTGGCCGAAAA | 60.262 | 41.667 | 0.00 | 0.00 | 36.69 | 2.29 |
751 | 753 | 4.865776 | TCAATTAGTTGTTGGCCGAAAAG | 58.134 | 39.130 | 0.00 | 0.00 | 36.69 | 2.27 |
752 | 754 | 3.934457 | ATTAGTTGTTGGCCGAAAAGG | 57.066 | 42.857 | 0.00 | 0.00 | 44.97 | 3.11 |
753 | 755 | 1.611519 | TAGTTGTTGGCCGAAAAGGG | 58.388 | 50.000 | 0.00 | 0.00 | 41.48 | 3.95 |
762 | 764 | 3.178539 | CGAAAAGGGCTCTTCGGC | 58.821 | 61.111 | 0.00 | 0.00 | 40.52 | 5.54 |
770 | 772 | 4.699522 | GCTCTTCGGCCCGTGGTT | 62.700 | 66.667 | 1.63 | 0.00 | 0.00 | 3.67 |
771 | 773 | 2.742372 | CTCTTCGGCCCGTGGTTG | 60.742 | 66.667 | 1.63 | 0.00 | 0.00 | 3.77 |
772 | 774 | 3.234630 | CTCTTCGGCCCGTGGTTGA | 62.235 | 63.158 | 1.63 | 0.00 | 0.00 | 3.18 |
773 | 775 | 3.047877 | CTTCGGCCCGTGGTTGAC | 61.048 | 66.667 | 1.63 | 0.00 | 0.00 | 3.18 |
783 | 785 | 0.796312 | CGTGGTTGACGGAAGAATGG | 59.204 | 55.000 | 0.00 | 0.00 | 44.85 | 3.16 |
784 | 786 | 0.521735 | GTGGTTGACGGAAGAATGGC | 59.478 | 55.000 | 0.00 | 0.00 | 0.00 | 4.40 |
785 | 787 | 0.400213 | TGGTTGACGGAAGAATGGCT | 59.600 | 50.000 | 0.00 | 0.00 | 0.00 | 4.75 |
786 | 788 | 0.804989 | GGTTGACGGAAGAATGGCTG | 59.195 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
787 | 789 | 1.523758 | GTTGACGGAAGAATGGCTGT | 58.476 | 50.000 | 0.00 | 0.00 | 0.00 | 4.40 |
788 | 790 | 2.614481 | GGTTGACGGAAGAATGGCTGTA | 60.614 | 50.000 | 0.00 | 0.00 | 0.00 | 2.74 |
789 | 791 | 2.380084 | TGACGGAAGAATGGCTGTAC | 57.620 | 50.000 | 0.00 | 0.00 | 0.00 | 2.90 |
790 | 792 | 1.899814 | TGACGGAAGAATGGCTGTACT | 59.100 | 47.619 | 0.00 | 0.00 | 0.00 | 2.73 |
791 | 793 | 2.271800 | GACGGAAGAATGGCTGTACTG | 58.728 | 52.381 | 0.00 | 0.00 | 0.00 | 2.74 |
792 | 794 | 1.066143 | ACGGAAGAATGGCTGTACTGG | 60.066 | 52.381 | 1.65 | 0.00 | 0.00 | 4.00 |
793 | 795 | 1.743772 | CGGAAGAATGGCTGTACTGGG | 60.744 | 57.143 | 1.65 | 0.00 | 0.00 | 4.45 |
794 | 796 | 1.383523 | GAAGAATGGCTGTACTGGGC | 58.616 | 55.000 | 1.65 | 4.21 | 0.00 | 5.36 |
799 | 801 | 2.125106 | GGCTGTACTGGGCCGAAG | 60.125 | 66.667 | 0.00 | 0.00 | 38.91 | 3.79 |
800 | 802 | 2.656069 | GGCTGTACTGGGCCGAAGA | 61.656 | 63.158 | 10.86 | 0.00 | 38.91 | 2.87 |
801 | 803 | 1.448013 | GCTGTACTGGGCCGAAGAC | 60.448 | 63.158 | 10.86 | 1.67 | 0.00 | 3.01 |
802 | 804 | 1.889530 | GCTGTACTGGGCCGAAGACT | 61.890 | 60.000 | 10.86 | 0.00 | 0.00 | 3.24 |
803 | 805 | 0.108615 | CTGTACTGGGCCGAAGACTG | 60.109 | 60.000 | 10.86 | 1.76 | 0.00 | 3.51 |
804 | 806 | 1.218316 | GTACTGGGCCGAAGACTGG | 59.782 | 63.158 | 10.86 | 0.00 | 0.00 | 4.00 |
826 | 828 | 2.696076 | CGCGAGGTGATAAGTTTTCG | 57.304 | 50.000 | 0.00 | 0.00 | 0.00 | 3.46 |
827 | 829 | 2.256174 | CGCGAGGTGATAAGTTTTCGA | 58.744 | 47.619 | 0.00 | 0.00 | 0.00 | 3.71 |
828 | 830 | 2.664568 | CGCGAGGTGATAAGTTTTCGAA | 59.335 | 45.455 | 0.00 | 0.00 | 0.00 | 3.71 |
829 | 831 | 3.306166 | CGCGAGGTGATAAGTTTTCGAAT | 59.694 | 43.478 | 0.00 | 0.00 | 0.00 | 3.34 |
830 | 832 | 4.201685 | CGCGAGGTGATAAGTTTTCGAATT | 60.202 | 41.667 | 0.00 | 0.00 | 0.00 | 2.17 |
831 | 833 | 5.628134 | GCGAGGTGATAAGTTTTCGAATTT | 58.372 | 37.500 | 0.00 | 0.00 | 0.00 | 1.82 |
832 | 834 | 5.508224 | GCGAGGTGATAAGTTTTCGAATTTG | 59.492 | 40.000 | 0.00 | 0.00 | 0.00 | 2.32 |
833 | 835 | 5.508224 | CGAGGTGATAAGTTTTCGAATTTGC | 59.492 | 40.000 | 0.00 | 0.00 | 0.00 | 3.68 |
834 | 836 | 6.575162 | AGGTGATAAGTTTTCGAATTTGCT | 57.425 | 33.333 | 0.00 | 0.00 | 0.00 | 3.91 |
835 | 837 | 7.412563 | CGAGGTGATAAGTTTTCGAATTTGCTA | 60.413 | 37.037 | 0.00 | 0.00 | 0.00 | 3.49 |
836 | 838 | 8.281212 | AGGTGATAAGTTTTCGAATTTGCTAT | 57.719 | 30.769 | 0.00 | 0.00 | 0.00 | 2.97 |
837 | 839 | 9.391006 | AGGTGATAAGTTTTCGAATTTGCTATA | 57.609 | 29.630 | 0.00 | 0.00 | 0.00 | 1.31 |
838 | 840 | 9.997482 | GGTGATAAGTTTTCGAATTTGCTATAA | 57.003 | 29.630 | 0.00 | 0.00 | 0.00 | 0.98 |
914 | 978 | 2.472695 | TGTTGAGAATCCCCAAGTCG | 57.527 | 50.000 | 0.00 | 0.00 | 0.00 | 4.18 |
1025 | 1146 | 1.503818 | TTCGCCAAGGAAGTTGTCGC | 61.504 | 55.000 | 0.00 | 0.00 | 37.44 | 5.19 |
1065 | 1186 | 2.176273 | CCTTGGCCGCATCTTCTCG | 61.176 | 63.158 | 0.00 | 0.00 | 0.00 | 4.04 |
1443 | 1579 | 3.984193 | GATGCAGAGGTTGGCGGCT | 62.984 | 63.158 | 11.43 | 0.00 | 0.00 | 5.52 |
1512 | 1648 | 2.435693 | GCTGCTCGTCCAGGGGTAT | 61.436 | 63.158 | 0.00 | 0.00 | 33.44 | 2.73 |
1662 | 1798 | 2.047655 | ATCGTCGGCGCCAAGAAA | 60.048 | 55.556 | 28.98 | 7.69 | 38.14 | 2.52 |
1749 | 1885 | 2.504244 | GAGTGGTTCGAGACGCCG | 60.504 | 66.667 | 0.00 | 0.00 | 0.00 | 6.46 |
1752 | 1888 | 4.047059 | TGGTTCGAGACGCCGGAC | 62.047 | 66.667 | 5.05 | 0.00 | 37.32 | 4.79 |
1989 | 2128 | 4.222847 | GACCTCGCCCGGGACATC | 62.223 | 72.222 | 29.31 | 9.94 | 0.00 | 3.06 |
2524 | 3044 | 7.157050 | TCGTCGCAATAAATAGTCACAATAC | 57.843 | 36.000 | 0.00 | 0.00 | 0.00 | 1.89 |
2525 | 3045 | 6.976349 | TCGTCGCAATAAATAGTCACAATACT | 59.024 | 34.615 | 0.00 | 0.00 | 0.00 | 2.12 |
2575 | 3095 | 1.732259 | GGTCAGTTGATTTCGCGTGAT | 59.268 | 47.619 | 5.77 | 0.56 | 0.00 | 3.06 |
2577 | 3097 | 1.731709 | TCAGTTGATTTCGCGTGATGG | 59.268 | 47.619 | 5.77 | 0.00 | 0.00 | 3.51 |
2586 | 3106 | 1.428448 | TCGCGTGATGGAAGAAACAG | 58.572 | 50.000 | 5.77 | 0.00 | 0.00 | 3.16 |
2589 | 3109 | 2.032030 | CGCGTGATGGAAGAAACAGTTT | 60.032 | 45.455 | 0.00 | 0.00 | 0.00 | 2.66 |
2590 | 3110 | 3.300009 | GCGTGATGGAAGAAACAGTTTG | 58.700 | 45.455 | 2.34 | 0.00 | 0.00 | 2.93 |
2610 | 3130 | 0.907230 | AGGGAAGGAAAGAGCTCGCT | 60.907 | 55.000 | 8.37 | 0.00 | 0.00 | 4.93 |
2614 | 3134 | 0.248843 | AAGGAAAGAGCTCGCTGGAG | 59.751 | 55.000 | 8.37 | 0.00 | 43.46 | 3.86 |
2624 | 3144 | 0.972983 | CTCGCTGGAGGGAAGGAAGA | 60.973 | 60.000 | 0.00 | 0.00 | 36.61 | 2.87 |
2632 | 3152 | 0.907230 | AGGGAAGGAAGAAGCTCGCT | 60.907 | 55.000 | 0.00 | 0.00 | 0.00 | 4.93 |
2633 | 3153 | 0.824759 | GGGAAGGAAGAAGCTCGCTA | 59.175 | 55.000 | 0.00 | 0.00 | 0.00 | 4.26 |
2634 | 3154 | 1.202475 | GGGAAGGAAGAAGCTCGCTAG | 60.202 | 57.143 | 0.00 | 0.00 | 0.00 | 3.42 |
2663 | 3183 | 5.593010 | GCTACGCCATTATCTATCTTAGGG | 58.407 | 45.833 | 0.00 | 0.00 | 0.00 | 3.53 |
2665 | 3185 | 6.351117 | GCTACGCCATTATCTATCTTAGGGTT | 60.351 | 42.308 | 0.00 | 0.00 | 0.00 | 4.11 |
2666 | 3186 | 5.794894 | ACGCCATTATCTATCTTAGGGTTG | 58.205 | 41.667 | 0.00 | 0.00 | 0.00 | 3.77 |
2667 | 3187 | 5.307196 | ACGCCATTATCTATCTTAGGGTTGT | 59.693 | 40.000 | 0.00 | 0.00 | 0.00 | 3.32 |
2670 | 3190 | 6.476378 | CCATTATCTATCTTAGGGTTGTGGG | 58.524 | 44.000 | 0.00 | 0.00 | 0.00 | 4.61 |
2672 | 3192 | 2.771688 | TCTATCTTAGGGTTGTGGGGG | 58.228 | 52.381 | 0.00 | 0.00 | 0.00 | 5.40 |
2942 | 3462 | 4.908966 | CAAATTTGCCGAAAAGGATGTC | 57.091 | 40.909 | 5.01 | 0.00 | 45.00 | 3.06 |
2943 | 3463 | 3.592898 | AATTTGCCGAAAAGGATGTCC | 57.407 | 42.857 | 0.00 | 0.00 | 45.00 | 4.02 |
2944 | 3464 | 0.878416 | TTTGCCGAAAAGGATGTCCG | 59.122 | 50.000 | 0.00 | 0.00 | 45.00 | 4.79 |
2945 | 3465 | 0.035598 | TTGCCGAAAAGGATGTCCGA | 59.964 | 50.000 | 0.00 | 0.00 | 45.00 | 4.55 |
2946 | 3466 | 0.035598 | TGCCGAAAAGGATGTCCGAA | 59.964 | 50.000 | 0.00 | 0.00 | 45.00 | 4.30 |
2947 | 3467 | 0.727398 | GCCGAAAAGGATGTCCGAAG | 59.273 | 55.000 | 0.00 | 0.00 | 45.00 | 3.79 |
2948 | 3468 | 0.727398 | CCGAAAAGGATGTCCGAAGC | 59.273 | 55.000 | 0.00 | 0.00 | 45.00 | 3.86 |
2949 | 3469 | 1.438651 | CGAAAAGGATGTCCGAAGCA | 58.561 | 50.000 | 0.00 | 0.00 | 42.08 | 3.91 |
2950 | 3470 | 1.394917 | CGAAAAGGATGTCCGAAGCAG | 59.605 | 52.381 | 0.00 | 0.00 | 42.08 | 4.24 |
2951 | 3471 | 1.131315 | GAAAAGGATGTCCGAAGCAGC | 59.869 | 52.381 | 0.00 | 0.00 | 42.08 | 5.25 |
2952 | 3472 | 1.021390 | AAAGGATGTCCGAAGCAGCG | 61.021 | 55.000 | 0.00 | 0.00 | 42.08 | 5.18 |
2960 | 3480 | 2.213483 | CCGAAGCAGCGGTAATACG | 58.787 | 57.895 | 8.89 | 0.00 | 46.07 | 3.06 |
2961 | 3481 | 1.213094 | CCGAAGCAGCGGTAATACGG | 61.213 | 60.000 | 8.89 | 7.74 | 46.07 | 4.02 |
2962 | 3482 | 0.526954 | CGAAGCAGCGGTAATACGGT | 60.527 | 55.000 | 0.11 | 0.00 | 46.53 | 4.83 |
2973 | 3493 | 3.425227 | CGGTAATACGGTGGTGAAAAAGC | 60.425 | 47.826 | 0.00 | 0.00 | 0.00 | 3.51 |
2982 | 3502 | 2.099756 | GTGGTGAAAAAGCAGAGCAAGT | 59.900 | 45.455 | 0.00 | 0.00 | 36.83 | 3.16 |
2987 | 3507 | 3.944650 | TGAAAAAGCAGAGCAAGTGTGTA | 59.055 | 39.130 | 0.00 | 0.00 | 0.00 | 2.90 |
2989 | 3509 | 4.756084 | AAAAGCAGAGCAAGTGTGTATC | 57.244 | 40.909 | 0.00 | 0.00 | 0.00 | 2.24 |
3000 | 3520 | 5.128171 | AGCAAGTGTGTATCTAACCCGAATA | 59.872 | 40.000 | 0.00 | 0.00 | 0.00 | 1.75 |
3003 | 3523 | 6.010294 | AGTGTGTATCTAACCCGAATATCG | 57.990 | 41.667 | 0.00 | 0.00 | 40.07 | 2.92 |
3019 | 3539 | 6.362686 | CGAATATCGTTGGGAATGTTGTATG | 58.637 | 40.000 | 0.00 | 0.00 | 34.72 | 2.39 |
3086 | 3607 | 9.063615 | TGATCATAGTACAAGTCACGTACATAT | 57.936 | 33.333 | 0.00 | 0.00 | 41.40 | 1.78 |
3088 | 3609 | 7.570161 | TCATAGTACAAGTCACGTACATATCG | 58.430 | 38.462 | 0.00 | 0.00 | 41.40 | 2.92 |
3090 | 3611 | 5.804173 | AGTACAAGTCACGTACATATCGAC | 58.196 | 41.667 | 0.00 | 0.00 | 41.40 | 4.20 |
3093 | 3614 | 4.201891 | ACAAGTCACGTACATATCGACCTC | 60.202 | 45.833 | 0.00 | 0.00 | 0.00 | 3.85 |
3102 | 3623 | 3.596214 | ACATATCGACCTCGCAAAACTT | 58.404 | 40.909 | 0.00 | 0.00 | 39.60 | 2.66 |
3103 | 3624 | 4.751060 | ACATATCGACCTCGCAAAACTTA | 58.249 | 39.130 | 0.00 | 0.00 | 39.60 | 2.24 |
3117 | 3638 | 6.485313 | TCGCAAAACTTAAAGAATCCTCTGAA | 59.515 | 34.615 | 0.00 | 0.00 | 30.03 | 3.02 |
3122 | 3643 | 8.980481 | AAACTTAAAGAATCCTCTGAACTTGA | 57.020 | 30.769 | 0.00 | 0.00 | 30.03 | 3.02 |
3123 | 3644 | 7.971183 | ACTTAAAGAATCCTCTGAACTTGAC | 57.029 | 36.000 | 0.00 | 0.00 | 30.03 | 3.18 |
3124 | 3645 | 7.509546 | ACTTAAAGAATCCTCTGAACTTGACA | 58.490 | 34.615 | 0.00 | 0.00 | 30.03 | 3.58 |
3125 | 3646 | 7.442666 | ACTTAAAGAATCCTCTGAACTTGACAC | 59.557 | 37.037 | 0.00 | 0.00 | 30.03 | 3.67 |
3126 | 3647 | 5.559148 | AAGAATCCTCTGAACTTGACACT | 57.441 | 39.130 | 0.00 | 0.00 | 30.03 | 3.55 |
3127 | 3648 | 4.892433 | AGAATCCTCTGAACTTGACACTG | 58.108 | 43.478 | 0.00 | 0.00 | 0.00 | 3.66 |
3128 | 3649 | 4.590647 | AGAATCCTCTGAACTTGACACTGA | 59.409 | 41.667 | 0.00 | 0.00 | 0.00 | 3.41 |
3129 | 3650 | 3.735237 | TCCTCTGAACTTGACACTGAC | 57.265 | 47.619 | 0.00 | 0.00 | 0.00 | 3.51 |
3130 | 3651 | 3.031013 | TCCTCTGAACTTGACACTGACA | 58.969 | 45.455 | 0.00 | 0.00 | 0.00 | 3.58 |
3131 | 3652 | 3.643320 | TCCTCTGAACTTGACACTGACAT | 59.357 | 43.478 | 0.00 | 0.00 | 0.00 | 3.06 |
3132 | 3653 | 3.993081 | CCTCTGAACTTGACACTGACATC | 59.007 | 47.826 | 0.00 | 0.00 | 0.00 | 3.06 |
3133 | 3654 | 3.993081 | CTCTGAACTTGACACTGACATCC | 59.007 | 47.826 | 0.00 | 0.00 | 0.00 | 3.51 |
3134 | 3655 | 2.733552 | CTGAACTTGACACTGACATCCG | 59.266 | 50.000 | 0.00 | 0.00 | 0.00 | 4.18 |
3135 | 3656 | 1.461127 | GAACTTGACACTGACATCCGC | 59.539 | 52.381 | 0.00 | 0.00 | 0.00 | 5.54 |
3136 | 3657 | 0.320771 | ACTTGACACTGACATCCGCC | 60.321 | 55.000 | 0.00 | 0.00 | 0.00 | 6.13 |
3137 | 3658 | 0.320683 | CTTGACACTGACATCCGCCA | 60.321 | 55.000 | 0.00 | 0.00 | 0.00 | 5.69 |
3138 | 3659 | 0.602638 | TTGACACTGACATCCGCCAC | 60.603 | 55.000 | 0.00 | 0.00 | 0.00 | 5.01 |
3139 | 3660 | 1.741770 | GACACTGACATCCGCCACC | 60.742 | 63.158 | 0.00 | 0.00 | 0.00 | 4.61 |
3140 | 3661 | 2.172483 | GACACTGACATCCGCCACCT | 62.172 | 60.000 | 0.00 | 0.00 | 0.00 | 4.00 |
3141 | 3662 | 1.742880 | CACTGACATCCGCCACCTG | 60.743 | 63.158 | 0.00 | 0.00 | 0.00 | 4.00 |
3142 | 3663 | 2.821366 | CTGACATCCGCCACCTGC | 60.821 | 66.667 | 0.00 | 0.00 | 0.00 | 4.85 |
3143 | 3664 | 3.610619 | CTGACATCCGCCACCTGCA | 62.611 | 63.158 | 0.00 | 0.00 | 41.33 | 4.41 |
3144 | 3665 | 2.124570 | GACATCCGCCACCTGCAT | 60.125 | 61.111 | 0.00 | 0.00 | 41.33 | 3.96 |
3145 | 3666 | 2.124570 | ACATCCGCCACCTGCATC | 60.125 | 61.111 | 0.00 | 0.00 | 41.33 | 3.91 |
3146 | 3667 | 2.191375 | CATCCGCCACCTGCATCT | 59.809 | 61.111 | 0.00 | 0.00 | 41.33 | 2.90 |
3147 | 3668 | 2.184830 | CATCCGCCACCTGCATCTG | 61.185 | 63.158 | 0.00 | 0.00 | 41.33 | 2.90 |
3148 | 3669 | 2.369633 | ATCCGCCACCTGCATCTGA | 61.370 | 57.895 | 0.00 | 0.00 | 41.33 | 3.27 |
3149 | 3670 | 2.599645 | ATCCGCCACCTGCATCTGAC | 62.600 | 60.000 | 0.00 | 0.00 | 41.33 | 3.51 |
3150 | 3671 | 2.046988 | CGCCACCTGCATCTGACA | 60.047 | 61.111 | 0.00 | 0.00 | 41.33 | 3.58 |
3151 | 3672 | 2.393768 | CGCCACCTGCATCTGACAC | 61.394 | 63.158 | 0.00 | 0.00 | 41.33 | 3.67 |
3152 | 3673 | 2.042831 | GCCACCTGCATCTGACACC | 61.043 | 63.158 | 0.00 | 0.00 | 40.77 | 4.16 |
3153 | 3674 | 1.376086 | CCACCTGCATCTGACACCA | 59.624 | 57.895 | 0.00 | 0.00 | 0.00 | 4.17 |
3154 | 3675 | 0.957395 | CCACCTGCATCTGACACCAC | 60.957 | 60.000 | 0.00 | 0.00 | 0.00 | 4.16 |
3155 | 3676 | 0.957395 | CACCTGCATCTGACACCACC | 60.957 | 60.000 | 0.00 | 0.00 | 0.00 | 4.61 |
3156 | 3677 | 1.376086 | CCTGCATCTGACACCACCA | 59.624 | 57.895 | 0.00 | 0.00 | 0.00 | 4.17 |
3157 | 3678 | 0.957395 | CCTGCATCTGACACCACCAC | 60.957 | 60.000 | 0.00 | 0.00 | 0.00 | 4.16 |
3158 | 3679 | 0.250424 | CTGCATCTGACACCACCACA | 60.250 | 55.000 | 0.00 | 0.00 | 0.00 | 4.17 |
3159 | 3680 | 0.250424 | TGCATCTGACACCACCACAG | 60.250 | 55.000 | 0.00 | 0.00 | 0.00 | 3.66 |
3160 | 3681 | 0.250467 | GCATCTGACACCACCACAGT | 60.250 | 55.000 | 0.00 | 0.00 | 33.93 | 3.55 |
3161 | 3682 | 1.001974 | GCATCTGACACCACCACAGTA | 59.998 | 52.381 | 0.00 | 0.00 | 33.93 | 2.74 |
3162 | 3683 | 2.932622 | GCATCTGACACCACCACAGTAG | 60.933 | 54.545 | 0.00 | 0.00 | 33.93 | 2.57 |
3163 | 3684 | 2.082140 | TCTGACACCACCACAGTAGT | 57.918 | 50.000 | 0.00 | 0.00 | 33.93 | 2.73 |
3164 | 3685 | 1.686587 | TCTGACACCACCACAGTAGTG | 59.313 | 52.381 | 0.00 | 0.00 | 45.47 | 2.74 |
3165 | 3686 | 0.105964 | TGACACCACCACAGTAGTGC | 59.894 | 55.000 | 0.00 | 0.00 | 44.53 | 4.40 |
3166 | 3687 | 0.602905 | GACACCACCACAGTAGTGCC | 60.603 | 60.000 | 0.00 | 0.00 | 44.53 | 5.01 |
3167 | 3688 | 1.341913 | ACACCACCACAGTAGTGCCA | 61.342 | 55.000 | 0.00 | 0.00 | 44.53 | 4.92 |
3168 | 3689 | 0.179032 | CACCACCACAGTAGTGCCAA | 60.179 | 55.000 | 0.00 | 0.00 | 44.53 | 4.52 |
3169 | 3690 | 0.548989 | ACCACCACAGTAGTGCCAAA | 59.451 | 50.000 | 0.00 | 0.00 | 44.53 | 3.28 |
3170 | 3691 | 1.238439 | CCACCACAGTAGTGCCAAAG | 58.762 | 55.000 | 0.00 | 0.00 | 44.53 | 2.77 |
3171 | 3692 | 1.202758 | CCACCACAGTAGTGCCAAAGA | 60.203 | 52.381 | 0.00 | 0.00 | 44.53 | 2.52 |
3172 | 3693 | 2.571212 | CACCACAGTAGTGCCAAAGAA | 58.429 | 47.619 | 0.00 | 0.00 | 44.53 | 2.52 |
3173 | 3694 | 2.948979 | CACCACAGTAGTGCCAAAGAAA | 59.051 | 45.455 | 0.00 | 0.00 | 44.53 | 2.52 |
3174 | 3695 | 3.380004 | CACCACAGTAGTGCCAAAGAAAA | 59.620 | 43.478 | 0.00 | 0.00 | 44.53 | 2.29 |
3175 | 3696 | 4.020543 | ACCACAGTAGTGCCAAAGAAAAA | 58.979 | 39.130 | 0.00 | 0.00 | 44.53 | 1.94 |
3200 | 3721 | 1.281867 | TGATGGACCATCTTCACACCC | 59.718 | 52.381 | 30.11 | 6.56 | 41.06 | 4.61 |
3206 | 3727 | 0.036010 | CCATCTTCACACCCGAGCTT | 60.036 | 55.000 | 0.00 | 0.00 | 0.00 | 3.74 |
3210 | 3731 | 1.284982 | CTTCACACCCGAGCTTGACG | 61.285 | 60.000 | 1.22 | 0.00 | 0.00 | 4.35 |
3232 | 3753 | 2.146204 | GGCTCCACAGCTGATATGCAG | 61.146 | 57.143 | 23.35 | 4.91 | 46.03 | 4.41 |
3253 | 3774 | 2.877300 | GCTTTGCAGACCTCCAAGATGA | 60.877 | 50.000 | 0.00 | 0.00 | 0.00 | 2.92 |
3256 | 3777 | 1.980765 | TGCAGACCTCCAAGATGACTT | 59.019 | 47.619 | 0.00 | 0.00 | 36.73 | 3.01 |
3270 | 3791 | 5.796424 | AGATGACTTGCCAAAAACAAGAT | 57.204 | 34.783 | 10.26 | 0.00 | 45.99 | 2.40 |
3277 | 3798 | 6.223120 | ACTTGCCAAAAACAAGATCATTACC | 58.777 | 36.000 | 10.26 | 0.00 | 45.99 | 2.85 |
3287 | 3808 | 4.992319 | ACAAGATCATTACCGTTGAACGAA | 59.008 | 37.500 | 20.47 | 6.81 | 46.05 | 3.85 |
3289 | 3810 | 5.968387 | AGATCATTACCGTTGAACGAATC | 57.032 | 39.130 | 20.47 | 11.07 | 46.05 | 2.52 |
3297 | 3818 | 1.792006 | GTTGAACGAATCAGACCGGT | 58.208 | 50.000 | 6.92 | 6.92 | 39.77 | 5.28 |
3313 | 3834 | 2.517402 | GTGCAACACCCCGGACAA | 60.517 | 61.111 | 0.73 | 0.00 | 36.32 | 3.18 |
3314 | 3835 | 2.203280 | TGCAACACCCCGGACAAG | 60.203 | 61.111 | 0.73 | 0.00 | 0.00 | 3.16 |
3315 | 3836 | 3.670377 | GCAACACCCCGGACAAGC | 61.670 | 66.667 | 0.73 | 0.00 | 0.00 | 4.01 |
3316 | 3837 | 2.113139 | CAACACCCCGGACAAGCT | 59.887 | 61.111 | 0.73 | 0.00 | 0.00 | 3.74 |
3320 | 3841 | 0.907704 | ACACCCCGGACAAGCTATCA | 60.908 | 55.000 | 0.73 | 0.00 | 0.00 | 2.15 |
3325 | 3846 | 2.618045 | CCCCGGACAAGCTATCAAACTT | 60.618 | 50.000 | 0.73 | 0.00 | 0.00 | 2.66 |
3328 | 3849 | 3.125316 | CCGGACAAGCTATCAAACTTCAC | 59.875 | 47.826 | 0.00 | 0.00 | 0.00 | 3.18 |
3336 | 3857 | 3.065925 | GCTATCAAACTTCACATCTGGCC | 59.934 | 47.826 | 0.00 | 0.00 | 0.00 | 5.36 |
3340 | 3861 | 0.251341 | AACTTCACATCTGGCCCCAC | 60.251 | 55.000 | 0.00 | 0.00 | 0.00 | 4.61 |
3341 | 3862 | 1.379916 | CTTCACATCTGGCCCCACA | 59.620 | 57.895 | 0.00 | 0.00 | 0.00 | 4.17 |
3342 | 3863 | 0.962356 | CTTCACATCTGGCCCCACAC | 60.962 | 60.000 | 0.00 | 0.00 | 0.00 | 3.82 |
3352 | 3873 | 1.669440 | GCCCCACACGACTAAGACA | 59.331 | 57.895 | 0.00 | 0.00 | 0.00 | 3.41 |
3355 | 3876 | 2.874457 | GCCCCACACGACTAAGACATTT | 60.874 | 50.000 | 0.00 | 0.00 | 0.00 | 2.32 |
3356 | 3877 | 2.742053 | CCCCACACGACTAAGACATTTG | 59.258 | 50.000 | 0.00 | 0.00 | 0.00 | 2.32 |
3359 | 3880 | 3.679980 | CCACACGACTAAGACATTTGAGG | 59.320 | 47.826 | 0.00 | 0.00 | 0.00 | 3.86 |
3366 | 3887 | 6.424207 | ACGACTAAGACATTTGAGGAGAAAAC | 59.576 | 38.462 | 0.00 | 0.00 | 0.00 | 2.43 |
3371 | 3892 | 7.454260 | AAGACATTTGAGGAGAAAACCATAC | 57.546 | 36.000 | 0.00 | 0.00 | 0.00 | 2.39 |
3376 | 3897 | 2.912956 | TGAGGAGAAAACCATACCTGCT | 59.087 | 45.455 | 0.00 | 0.00 | 0.00 | 4.24 |
3400 | 3921 | 4.563404 | GGACCACGAACCCAACAA | 57.437 | 55.556 | 0.00 | 0.00 | 0.00 | 2.83 |
3405 | 3926 | 0.028374 | CCACGAACCCAACAAACGAC | 59.972 | 55.000 | 0.00 | 0.00 | 0.00 | 4.34 |
3409 | 3930 | 0.382873 | GAACCCAACAAACGACCCAC | 59.617 | 55.000 | 0.00 | 0.00 | 0.00 | 4.61 |
3416 | 3937 | 2.358322 | ACAAACGACCCACCATCTTT | 57.642 | 45.000 | 0.00 | 0.00 | 0.00 | 2.52 |
3417 | 3938 | 2.227194 | ACAAACGACCCACCATCTTTC | 58.773 | 47.619 | 0.00 | 0.00 | 0.00 | 2.62 |
3424 | 3945 | 3.741388 | CGACCCACCATCTTTCAGATACC | 60.741 | 52.174 | 0.00 | 0.00 | 32.12 | 2.73 |
3436 | 3957 | 0.249447 | CAGATACCGCCGATGCAGAA | 60.249 | 55.000 | 0.00 | 0.00 | 37.32 | 3.02 |
3455 | 3976 | 1.366679 | ACACAATCTGCATCTGCTCG | 58.633 | 50.000 | 3.53 | 0.00 | 42.66 | 5.03 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
28 | 30 | 8.863086 | ACATGGCAAATTCTTATGTAATAGCAT | 58.137 | 29.630 | 0.00 | 0.00 | 30.79 | 3.79 |
94 | 96 | 3.648339 | ATCTGCAGTGCGACAATTTTT | 57.352 | 38.095 | 14.67 | 0.00 | 0.00 | 1.94 |
114 | 116 | 6.567687 | TCCTTGAAAACGCATGAGAATTAA | 57.432 | 33.333 | 2.50 | 0.00 | 0.00 | 1.40 |
150 | 152 | 3.270877 | GGCTTACAATTCTCCATGTCGT | 58.729 | 45.455 | 0.00 | 0.00 | 0.00 | 4.34 |
152 | 154 | 5.643379 | TTTGGCTTACAATTCTCCATGTC | 57.357 | 39.130 | 0.00 | 0.00 | 39.21 | 3.06 |
176 | 178 | 9.344309 | CCATGGCAATTTTCAATATTTTGTTTC | 57.656 | 29.630 | 0.00 | 0.00 | 34.32 | 2.78 |
492 | 494 | 5.350504 | TTTGTTTCAAATGCCTCCTTTGA | 57.649 | 34.783 | 0.00 | 0.00 | 40.02 | 2.69 |
500 | 502 | 5.584251 | TCCTGAAGTTTTTGTTTCAAATGCC | 59.416 | 36.000 | 0.00 | 0.00 | 33.30 | 4.40 |
511 | 513 | 5.065218 | CGGGTCATAGATCCTGAAGTTTTTG | 59.935 | 44.000 | 0.00 | 0.00 | 28.99 | 2.44 |
527 | 529 | 0.533491 | CACGTCCTTTCCGGGTCATA | 59.467 | 55.000 | 0.00 | 0.00 | 0.00 | 2.15 |
528 | 530 | 1.295423 | CACGTCCTTTCCGGGTCAT | 59.705 | 57.895 | 0.00 | 0.00 | 0.00 | 3.06 |
531 | 533 | 3.109592 | TTGCACGTCCTTTCCGGGT | 62.110 | 57.895 | 0.00 | 0.00 | 0.00 | 5.28 |
532 | 534 | 2.281208 | TTGCACGTCCTTTCCGGG | 60.281 | 61.111 | 0.00 | 0.00 | 0.00 | 5.73 |
534 | 536 | 1.291877 | CCTCTTGCACGTCCTTTCCG | 61.292 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
540 | 542 | 4.681978 | ACGGCCTCTTGCACGTCC | 62.682 | 66.667 | 0.00 | 0.00 | 41.08 | 4.79 |
627 | 629 | 9.950680 | CGAATTTGCTATAAAAACCATGATAGT | 57.049 | 29.630 | 0.00 | 0.00 | 0.00 | 2.12 |
628 | 630 | 9.398170 | CCGAATTTGCTATAAAAACCATGATAG | 57.602 | 33.333 | 0.00 | 0.00 | 0.00 | 2.08 |
629 | 631 | 9.126151 | TCCGAATTTGCTATAAAAACCATGATA | 57.874 | 29.630 | 0.00 | 0.00 | 0.00 | 2.15 |
630 | 632 | 8.006298 | TCCGAATTTGCTATAAAAACCATGAT | 57.994 | 30.769 | 0.00 | 0.00 | 0.00 | 2.45 |
631 | 633 | 7.397892 | TCCGAATTTGCTATAAAAACCATGA | 57.602 | 32.000 | 0.00 | 0.00 | 0.00 | 3.07 |
632 | 634 | 8.379902 | GTTTCCGAATTTGCTATAAAAACCATG | 58.620 | 33.333 | 0.00 | 0.00 | 0.00 | 3.66 |
633 | 635 | 8.311109 | AGTTTCCGAATTTGCTATAAAAACCAT | 58.689 | 29.630 | 0.00 | 0.00 | 0.00 | 3.55 |
634 | 636 | 7.662897 | AGTTTCCGAATTTGCTATAAAAACCA | 58.337 | 30.769 | 0.00 | 0.00 | 0.00 | 3.67 |
635 | 637 | 9.797556 | ATAGTTTCCGAATTTGCTATAAAAACC | 57.202 | 29.630 | 0.00 | 0.00 | 0.00 | 3.27 |
641 | 643 | 9.431887 | GGTGATATAGTTTCCGAATTTGCTATA | 57.568 | 33.333 | 0.00 | 0.00 | 0.00 | 1.31 |
642 | 644 | 8.157476 | AGGTGATATAGTTTCCGAATTTGCTAT | 58.843 | 33.333 | 0.00 | 0.00 | 0.00 | 2.97 |
643 | 645 | 7.441157 | CAGGTGATATAGTTTCCGAATTTGCTA | 59.559 | 37.037 | 0.00 | 0.00 | 0.00 | 3.49 |
644 | 646 | 6.260936 | CAGGTGATATAGTTTCCGAATTTGCT | 59.739 | 38.462 | 0.00 | 0.00 | 0.00 | 3.91 |
645 | 647 | 6.260050 | TCAGGTGATATAGTTTCCGAATTTGC | 59.740 | 38.462 | 0.00 | 0.00 | 0.00 | 3.68 |
646 | 648 | 7.786178 | TCAGGTGATATAGTTTCCGAATTTG | 57.214 | 36.000 | 0.00 | 0.00 | 0.00 | 2.32 |
647 | 649 | 8.047310 | ACTTCAGGTGATATAGTTTCCGAATTT | 58.953 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
648 | 650 | 7.565680 | ACTTCAGGTGATATAGTTTCCGAATT | 58.434 | 34.615 | 0.00 | 0.00 | 0.00 | 2.17 |
649 | 651 | 7.125792 | ACTTCAGGTGATATAGTTTCCGAAT | 57.874 | 36.000 | 0.00 | 0.00 | 0.00 | 3.34 |
650 | 652 | 6.540438 | ACTTCAGGTGATATAGTTTCCGAA | 57.460 | 37.500 | 0.00 | 0.00 | 0.00 | 4.30 |
651 | 653 | 7.649533 | TTACTTCAGGTGATATAGTTTCCGA | 57.350 | 36.000 | 0.00 | 0.00 | 0.00 | 4.55 |
652 | 654 | 8.712285 | TTTTACTTCAGGTGATATAGTTTCCG | 57.288 | 34.615 | 0.00 | 0.00 | 0.00 | 4.30 |
676 | 678 | 2.897326 | GGGGGCATAGTTCTGTGTTTTT | 59.103 | 45.455 | 0.00 | 0.00 | 0.00 | 1.94 |
677 | 679 | 2.525368 | GGGGGCATAGTTCTGTGTTTT | 58.475 | 47.619 | 0.00 | 0.00 | 0.00 | 2.43 |
678 | 680 | 1.613255 | CGGGGGCATAGTTCTGTGTTT | 60.613 | 52.381 | 0.00 | 0.00 | 0.00 | 2.83 |
679 | 681 | 0.035439 | CGGGGGCATAGTTCTGTGTT | 60.035 | 55.000 | 0.00 | 0.00 | 0.00 | 3.32 |
680 | 682 | 1.198759 | ACGGGGGCATAGTTCTGTGT | 61.199 | 55.000 | 0.00 | 0.00 | 0.00 | 3.72 |
681 | 683 | 0.462047 | GACGGGGGCATAGTTCTGTG | 60.462 | 60.000 | 0.00 | 0.00 | 0.00 | 3.66 |
682 | 684 | 1.905512 | GACGGGGGCATAGTTCTGT | 59.094 | 57.895 | 0.00 | 0.00 | 0.00 | 3.41 |
683 | 685 | 1.227263 | CGACGGGGGCATAGTTCTG | 60.227 | 63.158 | 0.00 | 0.00 | 0.00 | 3.02 |
684 | 686 | 2.432300 | CCGACGGGGGCATAGTTCT | 61.432 | 63.158 | 5.81 | 0.00 | 0.00 | 3.01 |
685 | 687 | 2.108362 | CCGACGGGGGCATAGTTC | 59.892 | 66.667 | 5.81 | 0.00 | 0.00 | 3.01 |
703 | 705 | 4.697756 | TCTTCGGCCCACGCAAGG | 62.698 | 66.667 | 0.00 | 0.00 | 43.86 | 3.61 |
704 | 706 | 3.423154 | GTCTTCGGCCCACGCAAG | 61.423 | 66.667 | 0.00 | 0.00 | 43.86 | 4.01 |
705 | 707 | 4.243008 | TGTCTTCGGCCCACGCAA | 62.243 | 61.111 | 0.00 | 0.00 | 43.86 | 4.85 |
706 | 708 | 4.680237 | CTGTCTTCGGCCCACGCA | 62.680 | 66.667 | 0.00 | 0.00 | 43.86 | 5.24 |
707 | 709 | 4.681978 | ACTGTCTTCGGCCCACGC | 62.682 | 66.667 | 0.00 | 0.00 | 43.86 | 5.34 |
708 | 710 | 2.738521 | CACTGTCTTCGGCCCACG | 60.739 | 66.667 | 0.00 | 0.00 | 46.11 | 4.94 |
709 | 711 | 1.668151 | GACACTGTCTTCGGCCCAC | 60.668 | 63.158 | 0.00 | 0.00 | 0.00 | 4.61 |
710 | 712 | 2.741092 | GACACTGTCTTCGGCCCA | 59.259 | 61.111 | 0.00 | 0.00 | 0.00 | 5.36 |
711 | 713 | 2.047179 | GGACACTGTCTTCGGCCC | 60.047 | 66.667 | 9.08 | 0.00 | 32.47 | 5.80 |
712 | 714 | 1.079750 | GAGGACACTGTCTTCGGCC | 60.080 | 63.158 | 9.08 | 0.00 | 29.66 | 6.13 |
713 | 715 | 0.033504 | TTGAGGACACTGTCTTCGGC | 59.966 | 55.000 | 14.65 | 0.00 | 40.76 | 5.54 |
714 | 716 | 2.751166 | ATTGAGGACACTGTCTTCGG | 57.249 | 50.000 | 14.65 | 0.00 | 40.76 | 4.30 |
715 | 717 | 4.810790 | ACTAATTGAGGACACTGTCTTCG | 58.189 | 43.478 | 14.65 | 4.74 | 40.76 | 3.79 |
716 | 718 | 5.992217 | ACAACTAATTGAGGACACTGTCTTC | 59.008 | 40.000 | 13.16 | 13.16 | 38.80 | 2.87 |
717 | 719 | 5.930135 | ACAACTAATTGAGGACACTGTCTT | 58.070 | 37.500 | 9.08 | 0.89 | 39.30 | 3.01 |
718 | 720 | 5.552870 | ACAACTAATTGAGGACACTGTCT | 57.447 | 39.130 | 9.08 | 0.00 | 39.30 | 3.41 |
719 | 721 | 5.049405 | CCAACAACTAATTGAGGACACTGTC | 60.049 | 44.000 | 0.00 | 0.00 | 39.30 | 3.51 |
720 | 722 | 4.821805 | CCAACAACTAATTGAGGACACTGT | 59.178 | 41.667 | 0.00 | 0.00 | 39.30 | 3.55 |
721 | 723 | 4.320494 | GCCAACAACTAATTGAGGACACTG | 60.320 | 45.833 | 4.75 | 0.00 | 39.30 | 3.66 |
722 | 724 | 3.821033 | GCCAACAACTAATTGAGGACACT | 59.179 | 43.478 | 4.75 | 0.00 | 39.30 | 3.55 |
723 | 725 | 3.057526 | GGCCAACAACTAATTGAGGACAC | 60.058 | 47.826 | 0.00 | 0.00 | 40.26 | 3.67 |
724 | 726 | 3.153919 | GGCCAACAACTAATTGAGGACA | 58.846 | 45.455 | 0.00 | 0.00 | 40.26 | 4.02 |
725 | 727 | 2.161609 | CGGCCAACAACTAATTGAGGAC | 59.838 | 50.000 | 2.24 | 1.14 | 39.30 | 3.85 |
726 | 728 | 2.039216 | TCGGCCAACAACTAATTGAGGA | 59.961 | 45.455 | 2.24 | 0.00 | 39.30 | 3.71 |
727 | 729 | 2.432444 | TCGGCCAACAACTAATTGAGG | 58.568 | 47.619 | 2.24 | 0.00 | 39.30 | 3.86 |
728 | 730 | 4.497473 | TTTCGGCCAACAACTAATTGAG | 57.503 | 40.909 | 2.24 | 0.00 | 39.30 | 3.02 |
729 | 731 | 4.261825 | CCTTTTCGGCCAACAACTAATTGA | 60.262 | 41.667 | 2.24 | 0.00 | 39.30 | 2.57 |
730 | 732 | 3.987220 | CCTTTTCGGCCAACAACTAATTG | 59.013 | 43.478 | 2.24 | 0.00 | 41.98 | 2.32 |
731 | 733 | 3.006430 | CCCTTTTCGGCCAACAACTAATT | 59.994 | 43.478 | 2.24 | 0.00 | 0.00 | 1.40 |
732 | 734 | 2.560981 | CCCTTTTCGGCCAACAACTAAT | 59.439 | 45.455 | 2.24 | 0.00 | 0.00 | 1.73 |
733 | 735 | 1.957877 | CCCTTTTCGGCCAACAACTAA | 59.042 | 47.619 | 2.24 | 0.00 | 0.00 | 2.24 |
734 | 736 | 1.611519 | CCCTTTTCGGCCAACAACTA | 58.388 | 50.000 | 2.24 | 0.00 | 0.00 | 2.24 |
735 | 737 | 1.744320 | GCCCTTTTCGGCCAACAACT | 61.744 | 55.000 | 2.24 | 0.00 | 43.66 | 3.16 |
736 | 738 | 1.300620 | GCCCTTTTCGGCCAACAAC | 60.301 | 57.895 | 2.24 | 0.00 | 43.66 | 3.32 |
737 | 739 | 3.133946 | GCCCTTTTCGGCCAACAA | 58.866 | 55.556 | 2.24 | 0.00 | 43.66 | 2.83 |
745 | 747 | 3.178539 | GCCGAAGAGCCCTTTTCG | 58.821 | 61.111 | 12.39 | 12.39 | 44.17 | 3.46 |
753 | 755 | 4.699522 | AACCACGGGCCGAAGAGC | 62.700 | 66.667 | 35.78 | 0.00 | 0.00 | 4.09 |
754 | 756 | 2.742372 | CAACCACGGGCCGAAGAG | 60.742 | 66.667 | 35.78 | 19.34 | 0.00 | 2.85 |
755 | 757 | 3.235481 | TCAACCACGGGCCGAAGA | 61.235 | 61.111 | 35.78 | 18.50 | 0.00 | 2.87 |
756 | 758 | 3.047877 | GTCAACCACGGGCCGAAG | 61.048 | 66.667 | 35.78 | 24.62 | 0.00 | 3.79 |
757 | 759 | 4.973055 | CGTCAACCACGGGCCGAA | 62.973 | 66.667 | 35.78 | 7.37 | 45.46 | 4.30 |
765 | 767 | 0.521735 | GCCATTCTTCCGTCAACCAC | 59.478 | 55.000 | 0.00 | 0.00 | 0.00 | 4.16 |
766 | 768 | 0.400213 | AGCCATTCTTCCGTCAACCA | 59.600 | 50.000 | 0.00 | 0.00 | 0.00 | 3.67 |
767 | 769 | 0.804989 | CAGCCATTCTTCCGTCAACC | 59.195 | 55.000 | 0.00 | 0.00 | 0.00 | 3.77 |
768 | 770 | 1.523758 | ACAGCCATTCTTCCGTCAAC | 58.476 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
769 | 771 | 2.301870 | AGTACAGCCATTCTTCCGTCAA | 59.698 | 45.455 | 0.00 | 0.00 | 0.00 | 3.18 |
770 | 772 | 1.899814 | AGTACAGCCATTCTTCCGTCA | 59.100 | 47.619 | 0.00 | 0.00 | 0.00 | 4.35 |
771 | 773 | 2.271800 | CAGTACAGCCATTCTTCCGTC | 58.728 | 52.381 | 0.00 | 0.00 | 0.00 | 4.79 |
772 | 774 | 1.066143 | CCAGTACAGCCATTCTTCCGT | 60.066 | 52.381 | 0.00 | 0.00 | 0.00 | 4.69 |
773 | 775 | 1.656652 | CCAGTACAGCCATTCTTCCG | 58.343 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
774 | 776 | 2.019156 | GCCCAGTACAGCCATTCTTCC | 61.019 | 57.143 | 0.00 | 0.00 | 0.00 | 3.46 |
775 | 777 | 1.383523 | GCCCAGTACAGCCATTCTTC | 58.616 | 55.000 | 0.00 | 0.00 | 0.00 | 2.87 |
776 | 778 | 3.577389 | GCCCAGTACAGCCATTCTT | 57.423 | 52.632 | 0.00 | 0.00 | 0.00 | 2.52 |
782 | 784 | 2.125106 | CTTCGGCCCAGTACAGCC | 60.125 | 66.667 | 10.65 | 10.65 | 46.17 | 4.85 |
783 | 785 | 1.448013 | GTCTTCGGCCCAGTACAGC | 60.448 | 63.158 | 0.00 | 0.00 | 0.00 | 4.40 |
784 | 786 | 0.108615 | CAGTCTTCGGCCCAGTACAG | 60.109 | 60.000 | 0.00 | 0.00 | 0.00 | 2.74 |
785 | 787 | 1.541310 | CCAGTCTTCGGCCCAGTACA | 61.541 | 60.000 | 0.00 | 0.00 | 0.00 | 2.90 |
786 | 788 | 1.218316 | CCAGTCTTCGGCCCAGTAC | 59.782 | 63.158 | 0.00 | 0.00 | 0.00 | 2.73 |
787 | 789 | 2.656069 | GCCAGTCTTCGGCCCAGTA | 61.656 | 63.158 | 0.00 | 0.00 | 44.22 | 2.74 |
788 | 790 | 4.021925 | GCCAGTCTTCGGCCCAGT | 62.022 | 66.667 | 0.00 | 0.00 | 44.22 | 4.00 |
796 | 798 | 4.821589 | CCTCGCGGGCCAGTCTTC | 62.822 | 72.222 | 6.13 | 0.00 | 0.00 | 2.87 |
801 | 803 | 2.978452 | CTTATCACCTCGCGGGCCAG | 62.978 | 65.000 | 6.13 | 0.00 | 39.10 | 4.85 |
802 | 804 | 3.078196 | TTATCACCTCGCGGGCCA | 61.078 | 61.111 | 6.13 | 0.00 | 39.10 | 5.36 |
803 | 805 | 2.280186 | CTTATCACCTCGCGGGCC | 60.280 | 66.667 | 6.13 | 0.00 | 39.10 | 5.80 |
804 | 806 | 0.743345 | AAACTTATCACCTCGCGGGC | 60.743 | 55.000 | 6.13 | 0.00 | 39.10 | 6.13 |
805 | 807 | 1.664151 | GAAAACTTATCACCTCGCGGG | 59.336 | 52.381 | 6.13 | 0.59 | 41.89 | 6.13 |
806 | 808 | 1.323534 | CGAAAACTTATCACCTCGCGG | 59.676 | 52.381 | 6.13 | 0.00 | 0.00 | 6.46 |
807 | 809 | 2.256174 | TCGAAAACTTATCACCTCGCG | 58.744 | 47.619 | 0.00 | 0.00 | 0.00 | 5.87 |
808 | 810 | 4.859629 | ATTCGAAAACTTATCACCTCGC | 57.140 | 40.909 | 0.00 | 0.00 | 0.00 | 5.03 |
809 | 811 | 5.508224 | GCAAATTCGAAAACTTATCACCTCG | 59.492 | 40.000 | 0.00 | 0.00 | 0.00 | 4.63 |
810 | 812 | 6.612306 | AGCAAATTCGAAAACTTATCACCTC | 58.388 | 36.000 | 0.00 | 0.00 | 0.00 | 3.85 |
811 | 813 | 6.575162 | AGCAAATTCGAAAACTTATCACCT | 57.425 | 33.333 | 0.00 | 0.00 | 0.00 | 4.00 |
812 | 814 | 9.997482 | TTATAGCAAATTCGAAAACTTATCACC | 57.003 | 29.630 | 0.00 | 0.00 | 0.00 | 4.02 |
861 | 863 | 7.778853 | AGACATATGCCTCTTTGATTCAGATTT | 59.221 | 33.333 | 1.58 | 0.00 | 0.00 | 2.17 |
865 | 867 | 5.177142 | CGAGACATATGCCTCTTTGATTCAG | 59.823 | 44.000 | 15.89 | 0.00 | 0.00 | 3.02 |
878 | 880 | 5.348724 | TCTCAACAACTTTCGAGACATATGC | 59.651 | 40.000 | 1.58 | 0.00 | 29.71 | 3.14 |
879 | 881 | 6.951256 | TCTCAACAACTTTCGAGACATATG | 57.049 | 37.500 | 0.00 | 0.00 | 29.71 | 1.78 |
926 | 991 | 7.527084 | ACAAACAAAGTAGATTAGCTCGATC | 57.473 | 36.000 | 0.00 | 0.00 | 0.00 | 3.69 |
927 | 992 | 7.220300 | CGTACAAACAAAGTAGATTAGCTCGAT | 59.780 | 37.037 | 0.00 | 0.00 | 0.00 | 3.59 |
935 | 1000 | 4.391155 | TGGCCGTACAAACAAAGTAGATT | 58.609 | 39.130 | 0.00 | 0.00 | 0.00 | 2.40 |
1065 | 1186 | 2.760385 | AGGCCGTCTAGCAGGGAC | 60.760 | 66.667 | 0.00 | 2.83 | 38.54 | 4.46 |
1182 | 1303 | 1.133823 | AGCTGGTGGTTGTTGATGTGA | 60.134 | 47.619 | 0.00 | 0.00 | 0.00 | 3.58 |
1227 | 1348 | 4.830765 | GCGCGGTACATGCCCTCA | 62.831 | 66.667 | 8.83 | 0.00 | 0.00 | 3.86 |
1296 | 1417 | 2.659244 | TTGCCGTTGTCGTCCGTC | 60.659 | 61.111 | 0.00 | 0.00 | 35.01 | 4.79 |
1362 | 1492 | 2.169789 | CAAGCTCGTGATGCGGGAG | 61.170 | 63.158 | 0.00 | 0.00 | 45.67 | 4.30 |
1378 | 1508 | 3.001514 | GCCAGCTCCCCAGATCAA | 58.998 | 61.111 | 0.00 | 0.00 | 0.00 | 2.57 |
1645 | 1781 | 2.047655 | TTTCTTGGCGCCGACGAT | 60.048 | 55.556 | 23.90 | 0.00 | 43.93 | 3.73 |
1662 | 1798 | 2.203596 | ACCGTGGTCTTCCCGACT | 60.204 | 61.111 | 0.00 | 0.00 | 42.44 | 4.18 |
1752 | 1888 | 4.796231 | CCTCCGGCCTTCACGACG | 62.796 | 72.222 | 0.00 | 0.00 | 0.00 | 5.12 |
2107 | 2246 | 1.229019 | AGATCTCCCGGCCGATCAT | 60.229 | 57.895 | 30.73 | 12.85 | 38.75 | 2.45 |
2108 | 2247 | 2.198703 | AGATCTCCCGGCCGATCA | 59.801 | 61.111 | 30.73 | 8.78 | 38.75 | 2.92 |
2110 | 2249 | 3.620785 | GCAGATCTCCCGGCCGAT | 61.621 | 66.667 | 30.73 | 12.66 | 0.00 | 4.18 |
2157 | 2296 | 3.971702 | AGCCCACCAAGCACCCTC | 61.972 | 66.667 | 0.00 | 0.00 | 0.00 | 4.30 |
2332 | 2471 | 2.094659 | CGTCCTGCACGGTGACATC | 61.095 | 63.158 | 13.29 | 0.00 | 45.46 | 3.06 |
2539 | 3059 | 6.938030 | TCAACTGACCCAAATTCTAAATACGT | 59.062 | 34.615 | 0.00 | 0.00 | 0.00 | 3.57 |
2575 | 3095 | 3.943671 | TCCCTCAAACTGTTTCTTCCA | 57.056 | 42.857 | 2.13 | 0.00 | 0.00 | 3.53 |
2577 | 3097 | 4.461198 | TCCTTCCCTCAAACTGTTTCTTC | 58.539 | 43.478 | 2.13 | 0.00 | 0.00 | 2.87 |
2586 | 3106 | 3.078097 | GAGCTCTTTCCTTCCCTCAAAC | 58.922 | 50.000 | 6.43 | 0.00 | 0.00 | 2.93 |
2589 | 3109 | 0.898320 | CGAGCTCTTTCCTTCCCTCA | 59.102 | 55.000 | 12.85 | 0.00 | 0.00 | 3.86 |
2590 | 3110 | 0.461163 | GCGAGCTCTTTCCTTCCCTC | 60.461 | 60.000 | 12.85 | 0.00 | 0.00 | 4.30 |
2610 | 3130 | 1.280457 | GAGCTTCTTCCTTCCCTCCA | 58.720 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
2614 | 3134 | 0.824759 | TAGCGAGCTTCTTCCTTCCC | 59.175 | 55.000 | 1.86 | 0.00 | 0.00 | 3.97 |
2624 | 3144 | 1.679153 | GTAGCCTTCTCTAGCGAGCTT | 59.321 | 52.381 | 1.86 | 0.00 | 37.19 | 3.74 |
2645 | 3165 | 5.940470 | CCACAACCCTAAGATAGATAATGGC | 59.060 | 44.000 | 0.00 | 0.00 | 0.00 | 4.40 |
2672 | 3192 | 3.655810 | CTCTGCCGAGCTCACCACC | 62.656 | 68.421 | 15.40 | 0.00 | 0.00 | 4.61 |
2921 | 3441 | 3.679502 | GGACATCCTTTTCGGCAAATTTG | 59.320 | 43.478 | 14.03 | 14.03 | 0.00 | 2.32 |
2922 | 3442 | 3.613910 | CGGACATCCTTTTCGGCAAATTT | 60.614 | 43.478 | 0.00 | 0.00 | 0.00 | 1.82 |
2923 | 3443 | 2.094752 | CGGACATCCTTTTCGGCAAATT | 60.095 | 45.455 | 0.00 | 0.00 | 0.00 | 1.82 |
2924 | 3444 | 1.472480 | CGGACATCCTTTTCGGCAAAT | 59.528 | 47.619 | 0.00 | 0.00 | 0.00 | 2.32 |
2925 | 3445 | 0.878416 | CGGACATCCTTTTCGGCAAA | 59.122 | 50.000 | 0.00 | 0.00 | 0.00 | 3.68 |
2926 | 3446 | 0.035598 | TCGGACATCCTTTTCGGCAA | 59.964 | 50.000 | 0.00 | 0.00 | 0.00 | 4.52 |
2927 | 3447 | 0.035598 | TTCGGACATCCTTTTCGGCA | 59.964 | 50.000 | 0.00 | 0.00 | 0.00 | 5.69 |
2928 | 3448 | 0.727398 | CTTCGGACATCCTTTTCGGC | 59.273 | 55.000 | 0.00 | 0.00 | 0.00 | 5.54 |
2929 | 3449 | 0.727398 | GCTTCGGACATCCTTTTCGG | 59.273 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
2930 | 3450 | 1.394917 | CTGCTTCGGACATCCTTTTCG | 59.605 | 52.381 | 0.00 | 0.00 | 0.00 | 3.46 |
2931 | 3451 | 1.131315 | GCTGCTTCGGACATCCTTTTC | 59.869 | 52.381 | 0.00 | 0.00 | 0.00 | 2.29 |
2932 | 3452 | 1.168714 | GCTGCTTCGGACATCCTTTT | 58.831 | 50.000 | 0.00 | 0.00 | 0.00 | 2.27 |
2933 | 3453 | 1.021390 | CGCTGCTTCGGACATCCTTT | 61.021 | 55.000 | 0.00 | 0.00 | 0.00 | 3.11 |
2934 | 3454 | 1.448540 | CGCTGCTTCGGACATCCTT | 60.449 | 57.895 | 0.00 | 0.00 | 0.00 | 3.36 |
2935 | 3455 | 2.185350 | CGCTGCTTCGGACATCCT | 59.815 | 61.111 | 0.00 | 0.00 | 0.00 | 3.24 |
2943 | 3463 | 0.526954 | ACCGTATTACCGCTGCTTCG | 60.527 | 55.000 | 0.00 | 0.00 | 0.00 | 3.79 |
2944 | 3464 | 0.928229 | CACCGTATTACCGCTGCTTC | 59.072 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
2945 | 3465 | 0.461339 | CCACCGTATTACCGCTGCTT | 60.461 | 55.000 | 0.00 | 0.00 | 0.00 | 3.91 |
2946 | 3466 | 1.143183 | CCACCGTATTACCGCTGCT | 59.857 | 57.895 | 0.00 | 0.00 | 0.00 | 4.24 |
2947 | 3467 | 1.153509 | ACCACCGTATTACCGCTGC | 60.154 | 57.895 | 0.00 | 0.00 | 0.00 | 5.25 |
2948 | 3468 | 0.173935 | TCACCACCGTATTACCGCTG | 59.826 | 55.000 | 0.00 | 0.00 | 0.00 | 5.18 |
2949 | 3469 | 0.896923 | TTCACCACCGTATTACCGCT | 59.103 | 50.000 | 0.00 | 0.00 | 0.00 | 5.52 |
2950 | 3470 | 1.724429 | TTTCACCACCGTATTACCGC | 58.276 | 50.000 | 0.00 | 0.00 | 0.00 | 5.68 |
2951 | 3471 | 3.425227 | GCTTTTTCACCACCGTATTACCG | 60.425 | 47.826 | 0.00 | 0.00 | 0.00 | 4.02 |
2952 | 3472 | 3.502979 | TGCTTTTTCACCACCGTATTACC | 59.497 | 43.478 | 0.00 | 0.00 | 0.00 | 2.85 |
2953 | 3473 | 4.453136 | TCTGCTTTTTCACCACCGTATTAC | 59.547 | 41.667 | 0.00 | 0.00 | 0.00 | 1.89 |
2954 | 3474 | 4.643463 | TCTGCTTTTTCACCACCGTATTA | 58.357 | 39.130 | 0.00 | 0.00 | 0.00 | 0.98 |
2955 | 3475 | 3.482436 | TCTGCTTTTTCACCACCGTATT | 58.518 | 40.909 | 0.00 | 0.00 | 0.00 | 1.89 |
2956 | 3476 | 3.074412 | CTCTGCTTTTTCACCACCGTAT | 58.926 | 45.455 | 0.00 | 0.00 | 0.00 | 3.06 |
2957 | 3477 | 2.489971 | CTCTGCTTTTTCACCACCGTA | 58.510 | 47.619 | 0.00 | 0.00 | 0.00 | 4.02 |
2958 | 3478 | 1.308998 | CTCTGCTTTTTCACCACCGT | 58.691 | 50.000 | 0.00 | 0.00 | 0.00 | 4.83 |
2959 | 3479 | 0.040067 | GCTCTGCTTTTTCACCACCG | 60.040 | 55.000 | 0.00 | 0.00 | 0.00 | 4.94 |
2960 | 3480 | 1.032014 | TGCTCTGCTTTTTCACCACC | 58.968 | 50.000 | 0.00 | 0.00 | 0.00 | 4.61 |
2961 | 3481 | 2.099756 | ACTTGCTCTGCTTTTTCACCAC | 59.900 | 45.455 | 0.00 | 0.00 | 0.00 | 4.16 |
2962 | 3482 | 2.099592 | CACTTGCTCTGCTTTTTCACCA | 59.900 | 45.455 | 0.00 | 0.00 | 0.00 | 4.17 |
2963 | 3483 | 2.099756 | ACACTTGCTCTGCTTTTTCACC | 59.900 | 45.455 | 0.00 | 0.00 | 0.00 | 4.02 |
2964 | 3484 | 3.111098 | CACACTTGCTCTGCTTTTTCAC | 58.889 | 45.455 | 0.00 | 0.00 | 0.00 | 3.18 |
2973 | 3493 | 4.184629 | GGGTTAGATACACACTTGCTCTG | 58.815 | 47.826 | 0.00 | 0.00 | 0.00 | 3.35 |
2982 | 3502 | 6.210796 | CAACGATATTCGGGTTAGATACACA | 58.789 | 40.000 | 1.69 | 0.00 | 45.59 | 3.72 |
2987 | 3507 | 3.899360 | TCCCAACGATATTCGGGTTAGAT | 59.101 | 43.478 | 1.69 | 0.00 | 45.59 | 1.98 |
2989 | 3509 | 3.738830 | TCCCAACGATATTCGGGTTAG | 57.261 | 47.619 | 1.69 | 0.00 | 45.59 | 2.34 |
3000 | 3520 | 5.741011 | AGTACATACAACATTCCCAACGAT | 58.259 | 37.500 | 0.00 | 0.00 | 0.00 | 3.73 |
3060 | 3581 | 6.746745 | TGTACGTGACTTGTACTATGATCA | 57.253 | 37.500 | 0.00 | 0.00 | 42.09 | 2.92 |
3061 | 3582 | 9.544314 | GATATGTACGTGACTTGTACTATGATC | 57.456 | 37.037 | 0.00 | 0.00 | 42.09 | 2.92 |
3062 | 3583 | 8.228464 | CGATATGTACGTGACTTGTACTATGAT | 58.772 | 37.037 | 0.00 | 0.00 | 42.09 | 2.45 |
3064 | 3585 | 7.529854 | GTCGATATGTACGTGACTTGTACTATG | 59.470 | 40.741 | 0.00 | 0.00 | 42.09 | 2.23 |
3065 | 3586 | 7.307632 | GGTCGATATGTACGTGACTTGTACTAT | 60.308 | 40.741 | 0.00 | 1.58 | 42.09 | 2.12 |
3066 | 3587 | 6.018751 | GGTCGATATGTACGTGACTTGTACTA | 60.019 | 42.308 | 0.00 | 0.00 | 42.09 | 1.82 |
3067 | 3588 | 5.220739 | GGTCGATATGTACGTGACTTGTACT | 60.221 | 44.000 | 0.00 | 0.00 | 42.09 | 2.73 |
3068 | 3589 | 4.966366 | GGTCGATATGTACGTGACTTGTAC | 59.034 | 45.833 | 0.00 | 0.00 | 41.97 | 2.90 |
3069 | 3590 | 4.877823 | AGGTCGATATGTACGTGACTTGTA | 59.122 | 41.667 | 0.00 | 0.00 | 0.00 | 2.41 |
3070 | 3591 | 3.693085 | AGGTCGATATGTACGTGACTTGT | 59.307 | 43.478 | 0.00 | 0.00 | 0.00 | 3.16 |
3071 | 3592 | 4.280461 | GAGGTCGATATGTACGTGACTTG | 58.720 | 47.826 | 0.00 | 0.00 | 0.00 | 3.16 |
3073 | 3594 | 2.543012 | CGAGGTCGATATGTACGTGACT | 59.457 | 50.000 | 0.00 | 0.00 | 43.02 | 3.41 |
3074 | 3595 | 2.901209 | CGAGGTCGATATGTACGTGAC | 58.099 | 52.381 | 0.00 | 0.00 | 43.02 | 3.67 |
3076 | 3597 | 1.003223 | TGCGAGGTCGATATGTACGTG | 60.003 | 52.381 | 2.94 | 0.00 | 43.02 | 4.49 |
3077 | 3598 | 1.302366 | TGCGAGGTCGATATGTACGT | 58.698 | 50.000 | 2.94 | 0.00 | 43.02 | 3.57 |
3086 | 3607 | 3.719924 | TCTTTAAGTTTTGCGAGGTCGA | 58.280 | 40.909 | 2.94 | 0.00 | 43.02 | 4.20 |
3088 | 3609 | 5.181433 | AGGATTCTTTAAGTTTTGCGAGGTC | 59.819 | 40.000 | 0.00 | 0.00 | 0.00 | 3.85 |
3090 | 3611 | 5.412904 | AGAGGATTCTTTAAGTTTTGCGAGG | 59.587 | 40.000 | 0.00 | 0.00 | 0.00 | 4.63 |
3093 | 3614 | 6.241207 | TCAGAGGATTCTTTAAGTTTTGCG | 57.759 | 37.500 | 0.00 | 0.00 | 0.00 | 4.85 |
3102 | 3623 | 6.931281 | CAGTGTCAAGTTCAGAGGATTCTTTA | 59.069 | 38.462 | 0.00 | 0.00 | 0.00 | 1.85 |
3103 | 3624 | 5.762218 | CAGTGTCAAGTTCAGAGGATTCTTT | 59.238 | 40.000 | 0.00 | 0.00 | 0.00 | 2.52 |
3117 | 3638 | 0.320771 | GGCGGATGTCAGTGTCAAGT | 60.321 | 55.000 | 0.00 | 0.00 | 0.00 | 3.16 |
3122 | 3643 | 2.217038 | AGGTGGCGGATGTCAGTGT | 61.217 | 57.895 | 0.00 | 0.00 | 0.00 | 3.55 |
3123 | 3644 | 1.742880 | CAGGTGGCGGATGTCAGTG | 60.743 | 63.158 | 0.00 | 0.00 | 0.00 | 3.66 |
3124 | 3645 | 2.665000 | CAGGTGGCGGATGTCAGT | 59.335 | 61.111 | 0.00 | 0.00 | 0.00 | 3.41 |
3125 | 3646 | 2.821366 | GCAGGTGGCGGATGTCAG | 60.821 | 66.667 | 0.00 | 0.00 | 0.00 | 3.51 |
3134 | 3655 | 2.042831 | GGTGTCAGATGCAGGTGGC | 61.043 | 63.158 | 0.00 | 0.00 | 45.13 | 5.01 |
3135 | 3656 | 0.957395 | GTGGTGTCAGATGCAGGTGG | 60.957 | 60.000 | 0.00 | 0.00 | 0.00 | 4.61 |
3136 | 3657 | 0.957395 | GGTGGTGTCAGATGCAGGTG | 60.957 | 60.000 | 0.00 | 0.00 | 0.00 | 4.00 |
3137 | 3658 | 1.376466 | GGTGGTGTCAGATGCAGGT | 59.624 | 57.895 | 0.00 | 0.00 | 0.00 | 4.00 |
3138 | 3659 | 0.957395 | GTGGTGGTGTCAGATGCAGG | 60.957 | 60.000 | 0.00 | 0.00 | 0.00 | 4.85 |
3139 | 3660 | 0.250424 | TGTGGTGGTGTCAGATGCAG | 60.250 | 55.000 | 0.00 | 0.00 | 0.00 | 4.41 |
3140 | 3661 | 0.250424 | CTGTGGTGGTGTCAGATGCA | 60.250 | 55.000 | 0.00 | 0.00 | 0.00 | 3.96 |
3141 | 3662 | 0.250467 | ACTGTGGTGGTGTCAGATGC | 60.250 | 55.000 | 0.00 | 0.00 | 33.93 | 3.91 |
3142 | 3663 | 2.300152 | ACTACTGTGGTGGTGTCAGATG | 59.700 | 50.000 | 0.00 | 0.00 | 35.83 | 2.90 |
3143 | 3664 | 2.300152 | CACTACTGTGGTGGTGTCAGAT | 59.700 | 50.000 | 15.63 | 0.00 | 45.70 | 2.90 |
3144 | 3665 | 1.686587 | CACTACTGTGGTGGTGTCAGA | 59.313 | 52.381 | 15.63 | 0.00 | 45.70 | 3.27 |
3145 | 3666 | 2.154854 | CACTACTGTGGTGGTGTCAG | 57.845 | 55.000 | 15.63 | 0.00 | 45.70 | 3.51 |
3150 | 3671 | 0.548989 | TTTGGCACTACTGTGGTGGT | 59.451 | 50.000 | 23.06 | 0.00 | 43.97 | 4.16 |
3151 | 3672 | 1.202758 | TCTTTGGCACTACTGTGGTGG | 60.203 | 52.381 | 23.06 | 8.44 | 43.97 | 4.61 |
3152 | 3673 | 2.254546 | TCTTTGGCACTACTGTGGTG | 57.745 | 50.000 | 18.62 | 18.62 | 43.97 | 4.17 |
3153 | 3674 | 3.290948 | TTTCTTTGGCACTACTGTGGT | 57.709 | 42.857 | 0.00 | 0.00 | 43.97 | 4.16 |
3154 | 3675 | 4.647424 | TTTTTCTTTGGCACTACTGTGG | 57.353 | 40.909 | 0.00 | 0.00 | 43.97 | 4.17 |
3175 | 3696 | 5.047092 | GGTGTGAAGATGGTCCATCATTTTT | 60.047 | 40.000 | 29.57 | 17.11 | 42.72 | 1.94 |
3176 | 3697 | 4.463891 | GGTGTGAAGATGGTCCATCATTTT | 59.536 | 41.667 | 29.57 | 17.44 | 42.72 | 1.82 |
3177 | 3698 | 4.019174 | GGTGTGAAGATGGTCCATCATTT | 58.981 | 43.478 | 29.57 | 18.10 | 42.72 | 2.32 |
3178 | 3699 | 3.624777 | GGTGTGAAGATGGTCCATCATT | 58.375 | 45.455 | 29.57 | 20.79 | 42.72 | 2.57 |
3179 | 3700 | 2.092212 | GGGTGTGAAGATGGTCCATCAT | 60.092 | 50.000 | 29.57 | 20.58 | 42.72 | 2.45 |
3180 | 3701 | 1.281867 | GGGTGTGAAGATGGTCCATCA | 59.718 | 52.381 | 29.57 | 11.71 | 42.72 | 3.07 |
3181 | 3702 | 1.743772 | CGGGTGTGAAGATGGTCCATC | 60.744 | 57.143 | 22.47 | 22.47 | 40.80 | 3.51 |
3182 | 3703 | 0.253044 | CGGGTGTGAAGATGGTCCAT | 59.747 | 55.000 | 3.26 | 3.26 | 0.00 | 3.41 |
3183 | 3704 | 0.834261 | TCGGGTGTGAAGATGGTCCA | 60.834 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
3184 | 3705 | 0.108138 | CTCGGGTGTGAAGATGGTCC | 60.108 | 60.000 | 0.00 | 0.00 | 0.00 | 4.46 |
3185 | 3706 | 0.741221 | GCTCGGGTGTGAAGATGGTC | 60.741 | 60.000 | 0.00 | 0.00 | 0.00 | 4.02 |
3186 | 3707 | 1.194781 | AGCTCGGGTGTGAAGATGGT | 61.195 | 55.000 | 0.00 | 0.00 | 0.00 | 3.55 |
3187 | 3708 | 0.036010 | AAGCTCGGGTGTGAAGATGG | 60.036 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
3188 | 3709 | 1.081892 | CAAGCTCGGGTGTGAAGATG | 58.918 | 55.000 | 0.00 | 0.00 | 0.00 | 2.90 |
3189 | 3710 | 0.976641 | TCAAGCTCGGGTGTGAAGAT | 59.023 | 50.000 | 0.00 | 0.00 | 0.00 | 2.40 |
3190 | 3711 | 0.033504 | GTCAAGCTCGGGTGTGAAGA | 59.966 | 55.000 | 0.00 | 0.00 | 0.00 | 2.87 |
3213 | 3734 | 1.227639 | CTGCATATCAGCTGTGGAGC | 58.772 | 55.000 | 14.67 | 14.28 | 46.64 | 4.70 |
3232 | 3753 | 1.471684 | CATCTTGGAGGTCTGCAAAGC | 59.528 | 52.381 | 6.40 | 0.00 | 40.33 | 3.51 |
3253 | 3774 | 6.223120 | GGTAATGATCTTGTTTTTGGCAAGT | 58.777 | 36.000 | 0.00 | 0.00 | 42.67 | 3.16 |
3256 | 3777 | 4.279671 | ACGGTAATGATCTTGTTTTTGGCA | 59.720 | 37.500 | 0.00 | 0.00 | 0.00 | 4.92 |
3263 | 3784 | 4.992319 | TCGTTCAACGGTAATGATCTTGTT | 59.008 | 37.500 | 10.69 | 0.00 | 42.81 | 2.83 |
3266 | 3787 | 5.872617 | TGATTCGTTCAACGGTAATGATCTT | 59.127 | 36.000 | 10.69 | 0.00 | 42.81 | 2.40 |
3268 | 3789 | 5.518847 | TCTGATTCGTTCAACGGTAATGATC | 59.481 | 40.000 | 10.69 | 5.47 | 42.81 | 2.92 |
3270 | 3791 | 4.624024 | GTCTGATTCGTTCAACGGTAATGA | 59.376 | 41.667 | 10.69 | 1.13 | 42.81 | 2.57 |
3277 | 3798 | 0.713883 | CCGGTCTGATTCGTTCAACG | 59.286 | 55.000 | 2.64 | 2.64 | 44.19 | 4.10 |
3287 | 3808 | 1.302511 | GGTGTTGCACCGGTCTGAT | 60.303 | 57.895 | 2.59 | 0.00 | 44.95 | 2.90 |
3297 | 3818 | 2.203280 | CTTGTCCGGGGTGTTGCA | 60.203 | 61.111 | 0.00 | 0.00 | 0.00 | 4.08 |
3313 | 3834 | 3.944015 | GCCAGATGTGAAGTTTGATAGCT | 59.056 | 43.478 | 0.00 | 0.00 | 0.00 | 3.32 |
3314 | 3835 | 3.065925 | GGCCAGATGTGAAGTTTGATAGC | 59.934 | 47.826 | 0.00 | 0.00 | 0.00 | 2.97 |
3315 | 3836 | 3.629398 | GGGCCAGATGTGAAGTTTGATAG | 59.371 | 47.826 | 4.39 | 0.00 | 0.00 | 2.08 |
3316 | 3837 | 3.620488 | GGGCCAGATGTGAAGTTTGATA | 58.380 | 45.455 | 4.39 | 0.00 | 0.00 | 2.15 |
3320 | 3841 | 0.482446 | TGGGGCCAGATGTGAAGTTT | 59.518 | 50.000 | 4.39 | 0.00 | 0.00 | 2.66 |
3325 | 3846 | 2.756400 | GTGTGGGGCCAGATGTGA | 59.244 | 61.111 | 4.39 | 0.00 | 0.00 | 3.58 |
3328 | 3849 | 1.613317 | TAGTCGTGTGGGGCCAGATG | 61.613 | 60.000 | 4.39 | 0.00 | 0.00 | 2.90 |
3336 | 3857 | 3.659786 | TCAAATGTCTTAGTCGTGTGGG | 58.340 | 45.455 | 0.00 | 0.00 | 0.00 | 4.61 |
3340 | 3861 | 5.060662 | TCTCCTCAAATGTCTTAGTCGTG | 57.939 | 43.478 | 0.00 | 0.00 | 0.00 | 4.35 |
3341 | 3862 | 5.723672 | TTCTCCTCAAATGTCTTAGTCGT | 57.276 | 39.130 | 0.00 | 0.00 | 0.00 | 4.34 |
3342 | 3863 | 6.128526 | GGTTTTCTCCTCAAATGTCTTAGTCG | 60.129 | 42.308 | 0.00 | 0.00 | 0.00 | 4.18 |
3352 | 3873 | 4.706962 | GCAGGTATGGTTTTCTCCTCAAAT | 59.293 | 41.667 | 0.00 | 0.00 | 0.00 | 2.32 |
3355 | 3876 | 2.912956 | AGCAGGTATGGTTTTCTCCTCA | 59.087 | 45.455 | 0.00 | 0.00 | 31.66 | 3.86 |
3356 | 3877 | 3.636153 | AGCAGGTATGGTTTTCTCCTC | 57.364 | 47.619 | 0.00 | 0.00 | 31.66 | 3.71 |
3359 | 3880 | 4.816925 | GTGGATAGCAGGTATGGTTTTCTC | 59.183 | 45.833 | 0.00 | 0.00 | 38.36 | 2.87 |
3366 | 3887 | 1.000955 | GTCCGTGGATAGCAGGTATGG | 59.999 | 57.143 | 0.00 | 0.00 | 0.00 | 2.74 |
3371 | 3892 | 1.144057 | GTGGTCCGTGGATAGCAGG | 59.856 | 63.158 | 0.00 | 0.00 | 0.00 | 4.85 |
3376 | 3897 | 1.606885 | GGGTTCGTGGTCCGTGGATA | 61.607 | 60.000 | 0.00 | 0.00 | 37.94 | 2.59 |
3390 | 3911 | 0.382873 | GTGGGTCGTTTGTTGGGTTC | 59.617 | 55.000 | 0.00 | 0.00 | 0.00 | 3.62 |
3397 | 3918 | 2.227194 | GAAAGATGGTGGGTCGTTTGT | 58.773 | 47.619 | 0.00 | 0.00 | 0.00 | 2.83 |
3400 | 3921 | 1.697432 | TCTGAAAGATGGTGGGTCGTT | 59.303 | 47.619 | 0.00 | 0.00 | 38.67 | 3.85 |
3416 | 3937 | 1.106944 | TCTGCATCGGCGGTATCTGA | 61.107 | 55.000 | 7.21 | 1.95 | 46.81 | 3.27 |
3417 | 3938 | 0.249447 | TTCTGCATCGGCGGTATCTG | 60.249 | 55.000 | 7.21 | 0.00 | 46.81 | 2.90 |
3424 | 3945 | 0.247814 | GATTGTGTTCTGCATCGGCG | 60.248 | 55.000 | 0.00 | 0.00 | 45.35 | 6.46 |
3436 | 3957 | 1.338484 | ACGAGCAGATGCAGATTGTGT | 60.338 | 47.619 | 7.68 | 0.00 | 45.16 | 3.72 |
3445 | 3966 | 1.202580 | AGGTAATCCACGAGCAGATGC | 60.203 | 52.381 | 0.00 | 0.00 | 37.49 | 3.91 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.