Multiple sequence alignment - TraesCS7B01G318100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G318100 chr7B 100.000 2369 0 0 1 2369 568091912 568094280 0.000000e+00 4375
1 TraesCS7B01G318100 chr7D 89.981 1607 91 30 430 2004 529947775 529949343 0.000000e+00 2012
2 TraesCS7B01G318100 chr7D 93.484 353 19 2 2019 2369 529949330 529949680 2.700000e-144 521
3 TraesCS7B01G318100 chr7A 87.716 1563 115 43 435 1957 609410111 609411636 0.000000e+00 1751
4 TraesCS7B01G318100 chr2B 85.780 436 56 6 2 432 570063626 570064060 7.720000e-125 457
5 TraesCS7B01G318100 chr4D 85.550 436 59 4 1 432 417415394 417414959 9.980000e-124 453
6 TraesCS7B01G318100 chr1D 85.321 436 60 4 1 432 306222471 306222906 4.640000e-122 448
7 TraesCS7B01G318100 chr1A 85.714 427 55 6 3 425 572682066 572681642 1.670000e-121 446
8 TraesCS7B01G318100 chr1A 85.681 426 54 6 1 423 285979999 285980420 2.160000e-120 442
9 TraesCS7B01G318100 chr5D 85.287 435 58 6 1 431 505371998 505371566 6.010000e-121 444
10 TraesCS7B01G318100 chr5D 85.082 429 57 7 1 424 318867507 318867933 4.680000e-117 431
11 TraesCS7B01G318100 chr6A 85.057 435 57 7 1 431 199806285 199805855 1.010000e-118 436
12 TraesCS7B01G318100 chr6A 84.932 438 59 6 1 432 592431443 592431879 1.010000e-118 436


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G318100 chr7B 568091912 568094280 2368 False 4375.0 4375 100.0000 1 2369 1 chr7B.!!$F1 2368
1 TraesCS7B01G318100 chr7D 529947775 529949680 1905 False 1266.5 2012 91.7325 430 2369 2 chr7D.!!$F1 1939
2 TraesCS7B01G318100 chr7A 609410111 609411636 1525 False 1751.0 1751 87.7160 435 1957 1 chr7A.!!$F1 1522

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
208 209 0.039798 ATTGCTGTTCTGCTGCGTTG 60.040 50.0 0.0 0.0 43.81 4.10 F
219 220 0.108851 GCTGCGTTGGTTTTATGGGG 60.109 55.0 0.0 0.0 0.00 4.96 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1292 1332 0.107606 CTCCTCGAAGTCCTCCTCGA 60.108 60.0 0.00 0.00 0.00 4.04 R
1458 1499 0.587242 GTCATTCTACGTACGCGCGA 60.587 55.0 39.36 17.83 42.83 5.87 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 4.797912 AGATGAAATAAGGTTCTCCCCC 57.202 45.455 0.00 0.00 0.00 5.40
37 38 4.933607 CCCCCTAGACCCTTTCCA 57.066 61.111 0.00 0.00 0.00 3.53
38 39 3.114493 CCCCCTAGACCCTTTCCAA 57.886 57.895 0.00 0.00 0.00 3.53
39 40 1.608425 CCCCCTAGACCCTTTCCAAT 58.392 55.000 0.00 0.00 0.00 3.16
40 41 1.215423 CCCCCTAGACCCTTTCCAATG 59.785 57.143 0.00 0.00 0.00 2.82
41 42 1.215423 CCCCTAGACCCTTTCCAATGG 59.785 57.143 0.00 0.00 0.00 3.16
42 43 1.923148 CCCTAGACCCTTTCCAATGGT 59.077 52.381 0.00 0.00 34.33 3.55
43 44 2.357154 CCCTAGACCCTTTCCAATGGTG 60.357 54.545 0.00 0.00 30.97 4.17
44 45 2.308866 CCTAGACCCTTTCCAATGGTGT 59.691 50.000 0.00 0.00 30.97 4.16
45 46 2.292828 AGACCCTTTCCAATGGTGTG 57.707 50.000 0.00 0.00 30.97 3.82
46 47 1.499007 AGACCCTTTCCAATGGTGTGT 59.501 47.619 0.00 0.00 30.97 3.72
47 48 1.886542 GACCCTTTCCAATGGTGTGTC 59.113 52.381 0.00 0.00 30.97 3.67
48 49 1.499007 ACCCTTTCCAATGGTGTGTCT 59.501 47.619 0.00 0.00 0.00 3.41
49 50 2.714250 ACCCTTTCCAATGGTGTGTCTA 59.286 45.455 0.00 0.00 0.00 2.59
50 51 3.244911 ACCCTTTCCAATGGTGTGTCTAG 60.245 47.826 0.00 0.00 0.00 2.43
51 52 2.749621 CCTTTCCAATGGTGTGTCTAGC 59.250 50.000 0.00 0.00 0.00 3.42
52 53 3.411446 CTTTCCAATGGTGTGTCTAGCA 58.589 45.455 0.00 0.00 0.00 3.49
53 54 3.719268 TTCCAATGGTGTGTCTAGCAT 57.281 42.857 0.00 0.00 40.24 3.79
54 55 3.266510 TCCAATGGTGTGTCTAGCATC 57.733 47.619 0.00 0.00 37.77 3.91
55 56 2.571202 TCCAATGGTGTGTCTAGCATCA 59.429 45.455 0.00 0.00 37.77 3.07
56 57 3.200605 TCCAATGGTGTGTCTAGCATCAT 59.799 43.478 0.00 0.00 39.14 2.45
57 58 3.562973 CCAATGGTGTGTCTAGCATCATC 59.437 47.826 0.00 0.00 36.75 2.92
58 59 2.988010 TGGTGTGTCTAGCATCATCC 57.012 50.000 0.00 0.00 0.00 3.51
59 60 1.136891 TGGTGTGTCTAGCATCATCCG 59.863 52.381 0.00 0.00 0.00 4.18
60 61 1.137086 GGTGTGTCTAGCATCATCCGT 59.863 52.381 0.00 0.00 0.00 4.69
61 62 2.196749 GTGTGTCTAGCATCATCCGTG 58.803 52.381 0.00 0.00 0.00 4.94
62 63 1.136891 TGTGTCTAGCATCATCCGTGG 59.863 52.381 0.00 0.00 0.00 4.94
63 64 0.752658 TGTCTAGCATCATCCGTGGG 59.247 55.000 0.00 0.00 0.00 4.61
64 65 0.601311 GTCTAGCATCATCCGTGGGC 60.601 60.000 0.00 0.00 0.00 5.36
65 66 1.665916 CTAGCATCATCCGTGGGCG 60.666 63.158 0.00 0.00 33.27 6.13
66 67 2.369257 CTAGCATCATCCGTGGGCGT 62.369 60.000 0.00 0.00 36.15 5.68
67 68 2.642996 TAGCATCATCCGTGGGCGTG 62.643 60.000 0.00 0.00 36.15 5.34
68 69 2.125147 CATCATCCGTGGGCGTGT 60.125 61.111 0.00 0.00 36.15 4.49
69 70 2.125147 ATCATCCGTGGGCGTGTG 60.125 61.111 0.00 0.00 36.15 3.82
70 71 2.655073 ATCATCCGTGGGCGTGTGA 61.655 57.895 0.00 0.00 35.30 3.58
71 72 2.178876 ATCATCCGTGGGCGTGTGAA 62.179 55.000 0.00 0.00 34.79 3.18
72 73 2.047274 ATCCGTGGGCGTGTGAAG 60.047 61.111 0.00 0.00 36.15 3.02
73 74 3.605749 ATCCGTGGGCGTGTGAAGG 62.606 63.158 0.00 0.00 36.15 3.46
74 75 4.619227 CCGTGGGCGTGTGAAGGT 62.619 66.667 0.00 0.00 36.15 3.50
75 76 3.345808 CGTGGGCGTGTGAAGGTG 61.346 66.667 0.00 0.00 0.00 4.00
76 77 2.203153 GTGGGCGTGTGAAGGTGT 60.203 61.111 0.00 0.00 0.00 4.16
77 78 2.203139 TGGGCGTGTGAAGGTGTG 60.203 61.111 0.00 0.00 0.00 3.82
78 79 2.203153 GGGCGTGTGAAGGTGTGT 60.203 61.111 0.00 0.00 0.00 3.72
79 80 2.251642 GGGCGTGTGAAGGTGTGTC 61.252 63.158 0.00 0.00 0.00 3.67
80 81 1.227556 GGCGTGTGAAGGTGTGTCT 60.228 57.895 0.00 0.00 0.00 3.41
81 82 1.222115 GGCGTGTGAAGGTGTGTCTC 61.222 60.000 0.00 0.00 0.00 3.36
82 83 0.249489 GCGTGTGAAGGTGTGTCTCT 60.249 55.000 0.00 0.00 0.00 3.10
83 84 1.491670 CGTGTGAAGGTGTGTCTCTG 58.508 55.000 0.00 0.00 0.00 3.35
84 85 1.869754 CGTGTGAAGGTGTGTCTCTGG 60.870 57.143 0.00 0.00 0.00 3.86
85 86 1.139058 GTGTGAAGGTGTGTCTCTGGT 59.861 52.381 0.00 0.00 0.00 4.00
86 87 1.138859 TGTGAAGGTGTGTCTCTGGTG 59.861 52.381 0.00 0.00 0.00 4.17
87 88 0.758734 TGAAGGTGTGTCTCTGGTGG 59.241 55.000 0.00 0.00 0.00 4.61
88 89 1.048601 GAAGGTGTGTCTCTGGTGGA 58.951 55.000 0.00 0.00 0.00 4.02
89 90 1.625818 GAAGGTGTGTCTCTGGTGGAT 59.374 52.381 0.00 0.00 0.00 3.41
90 91 1.270907 AGGTGTGTCTCTGGTGGATC 58.729 55.000 0.00 0.00 0.00 3.36
91 92 1.203237 AGGTGTGTCTCTGGTGGATCT 60.203 52.381 0.00 0.00 0.00 2.75
92 93 2.043115 AGGTGTGTCTCTGGTGGATCTA 59.957 50.000 0.00 0.00 0.00 1.98
93 94 3.034635 GGTGTGTCTCTGGTGGATCTAT 58.965 50.000 0.00 0.00 0.00 1.98
94 95 4.079154 AGGTGTGTCTCTGGTGGATCTATA 60.079 45.833 0.00 0.00 0.00 1.31
95 96 4.835615 GGTGTGTCTCTGGTGGATCTATAT 59.164 45.833 0.00 0.00 0.00 0.86
96 97 5.305644 GGTGTGTCTCTGGTGGATCTATATT 59.694 44.000 0.00 0.00 0.00 1.28
97 98 6.183361 GGTGTGTCTCTGGTGGATCTATATTT 60.183 42.308 0.00 0.00 0.00 1.40
98 99 6.703607 GTGTGTCTCTGGTGGATCTATATTTG 59.296 42.308 0.00 0.00 0.00 2.32
99 100 6.183361 TGTGTCTCTGGTGGATCTATATTTGG 60.183 42.308 0.00 0.00 0.00 3.28
100 101 5.905331 TGTCTCTGGTGGATCTATATTTGGT 59.095 40.000 0.00 0.00 0.00 3.67
101 102 6.183361 TGTCTCTGGTGGATCTATATTTGGTG 60.183 42.308 0.00 0.00 0.00 4.17
102 103 5.307976 TCTCTGGTGGATCTATATTTGGTGG 59.692 44.000 0.00 0.00 0.00 4.61
103 104 5.223655 TCTGGTGGATCTATATTTGGTGGA 58.776 41.667 0.00 0.00 0.00 4.02
104 105 5.851693 TCTGGTGGATCTATATTTGGTGGAT 59.148 40.000 0.00 0.00 0.00 3.41
105 106 6.332635 TCTGGTGGATCTATATTTGGTGGATT 59.667 38.462 0.00 0.00 0.00 3.01
106 107 6.921412 TGGTGGATCTATATTTGGTGGATTT 58.079 36.000 0.00 0.00 0.00 2.17
107 108 6.777091 TGGTGGATCTATATTTGGTGGATTTG 59.223 38.462 0.00 0.00 0.00 2.32
108 109 6.294731 GGTGGATCTATATTTGGTGGATTTGC 60.295 42.308 0.00 0.00 0.00 3.68
109 110 6.491403 GTGGATCTATATTTGGTGGATTTGCT 59.509 38.462 0.00 0.00 0.00 3.91
110 111 6.716628 TGGATCTATATTTGGTGGATTTGCTC 59.283 38.462 0.00 0.00 0.00 4.26
111 112 6.128172 GGATCTATATTTGGTGGATTTGCTCG 60.128 42.308 0.00 0.00 0.00 5.03
112 113 5.063204 TCTATATTTGGTGGATTTGCTCGG 58.937 41.667 0.00 0.00 0.00 4.63
113 114 2.214376 ATTTGGTGGATTTGCTCGGA 57.786 45.000 0.00 0.00 0.00 4.55
114 115 2.214376 TTTGGTGGATTTGCTCGGAT 57.786 45.000 0.00 0.00 0.00 4.18
115 116 1.750193 TTGGTGGATTTGCTCGGATC 58.250 50.000 0.00 0.00 0.00 3.36
116 117 0.911769 TGGTGGATTTGCTCGGATCT 59.088 50.000 0.00 0.00 0.00 2.75
117 118 2.115427 TGGTGGATTTGCTCGGATCTA 58.885 47.619 0.00 0.00 0.00 1.98
118 119 2.103094 TGGTGGATTTGCTCGGATCTAG 59.897 50.000 0.00 0.00 0.00 2.43
119 120 2.103263 GGTGGATTTGCTCGGATCTAGT 59.897 50.000 0.00 0.00 0.00 2.57
120 121 3.385577 GTGGATTTGCTCGGATCTAGTC 58.614 50.000 0.00 0.00 0.00 2.59
121 122 2.034685 TGGATTTGCTCGGATCTAGTCG 59.965 50.000 0.00 0.00 0.00 4.18
122 123 2.034812 GGATTTGCTCGGATCTAGTCGT 59.965 50.000 0.00 0.00 0.00 4.34
123 124 3.252701 GGATTTGCTCGGATCTAGTCGTA 59.747 47.826 0.00 0.00 0.00 3.43
124 125 3.965292 TTTGCTCGGATCTAGTCGTAG 57.035 47.619 0.00 0.00 0.00 3.51
125 126 2.616634 TGCTCGGATCTAGTCGTAGT 57.383 50.000 0.00 0.00 0.00 2.73
126 127 2.915349 TGCTCGGATCTAGTCGTAGTT 58.085 47.619 0.00 0.00 0.00 2.24
127 128 2.871022 TGCTCGGATCTAGTCGTAGTTC 59.129 50.000 0.00 0.00 0.00 3.01
128 129 2.096811 GCTCGGATCTAGTCGTAGTTCG 60.097 54.545 0.00 0.00 41.41 3.95
129 130 3.122297 CTCGGATCTAGTCGTAGTTCGT 58.878 50.000 0.00 0.00 40.80 3.85
130 131 3.119291 TCGGATCTAGTCGTAGTTCGTC 58.881 50.000 0.00 0.00 40.80 4.20
131 132 3.122297 CGGATCTAGTCGTAGTTCGTCT 58.878 50.000 0.00 0.00 40.50 4.18
132 133 4.036852 TCGGATCTAGTCGTAGTTCGTCTA 59.963 45.833 0.00 0.00 38.63 2.59
133 134 4.148000 CGGATCTAGTCGTAGTTCGTCTAC 59.852 50.000 9.32 9.32 43.87 2.59
143 144 3.637998 AGTTCGTCTACGTTCATGTGT 57.362 42.857 0.00 0.00 40.80 3.72
144 145 3.973657 AGTTCGTCTACGTTCATGTGTT 58.026 40.909 0.00 0.00 40.80 3.32
145 146 4.365723 AGTTCGTCTACGTTCATGTGTTT 58.634 39.130 0.00 0.00 40.80 2.83
146 147 4.807304 AGTTCGTCTACGTTCATGTGTTTT 59.193 37.500 0.00 0.00 40.80 2.43
147 148 4.959631 TCGTCTACGTTCATGTGTTTTC 57.040 40.909 0.00 0.00 40.80 2.29
148 149 4.361420 TCGTCTACGTTCATGTGTTTTCA 58.639 39.130 0.00 0.00 40.80 2.69
149 150 4.443063 TCGTCTACGTTCATGTGTTTTCAG 59.557 41.667 0.00 0.00 40.80 3.02
150 151 4.376008 CGTCTACGTTCATGTGTTTTCAGG 60.376 45.833 0.00 0.00 34.11 3.86
151 152 4.510340 GTCTACGTTCATGTGTTTTCAGGT 59.490 41.667 0.00 0.00 0.00 4.00
152 153 5.007332 GTCTACGTTCATGTGTTTTCAGGTT 59.993 40.000 0.00 0.00 0.00 3.50
153 154 4.027572 ACGTTCATGTGTTTTCAGGTTG 57.972 40.909 0.00 0.00 0.00 3.77
154 155 3.181491 ACGTTCATGTGTTTTCAGGTTGG 60.181 43.478 0.00 0.00 0.00 3.77
155 156 3.066064 CGTTCATGTGTTTTCAGGTTGGA 59.934 43.478 0.00 0.00 0.00 3.53
156 157 4.261572 CGTTCATGTGTTTTCAGGTTGGAT 60.262 41.667 0.00 0.00 0.00 3.41
157 158 5.222631 GTTCATGTGTTTTCAGGTTGGATC 58.777 41.667 0.00 0.00 0.00 3.36
158 159 3.826157 TCATGTGTTTTCAGGTTGGATCC 59.174 43.478 4.20 4.20 0.00 3.36
159 160 3.593442 TGTGTTTTCAGGTTGGATCCT 57.407 42.857 14.23 0.00 38.51 3.24
160 161 3.909732 TGTGTTTTCAGGTTGGATCCTT 58.090 40.909 14.23 0.00 35.37 3.36
161 162 3.888930 TGTGTTTTCAGGTTGGATCCTTC 59.111 43.478 14.23 5.77 35.37 3.46
162 163 4.145052 GTGTTTTCAGGTTGGATCCTTCT 58.855 43.478 14.23 4.81 35.37 2.85
163 164 4.022849 GTGTTTTCAGGTTGGATCCTTCTG 60.023 45.833 14.23 16.37 35.37 3.02
164 165 4.141274 TGTTTTCAGGTTGGATCCTTCTGA 60.141 41.667 20.49 20.49 35.37 3.27
165 166 4.934797 TTTCAGGTTGGATCCTTCTGAT 57.065 40.909 23.08 2.19 35.37 2.90
176 177 5.291293 GATCCTTCTGATCTACGCTACTC 57.709 47.826 0.00 0.00 45.46 2.59
177 178 4.425180 TCCTTCTGATCTACGCTACTCT 57.575 45.455 0.00 0.00 0.00 3.24
178 179 4.783055 TCCTTCTGATCTACGCTACTCTT 58.217 43.478 0.00 0.00 0.00 2.85
179 180 4.817464 TCCTTCTGATCTACGCTACTCTTC 59.183 45.833 0.00 0.00 0.00 2.87
180 181 4.576873 CCTTCTGATCTACGCTACTCTTCA 59.423 45.833 0.00 0.00 0.00 3.02
181 182 5.487153 TTCTGATCTACGCTACTCTTCAC 57.513 43.478 0.00 0.00 0.00 3.18
182 183 3.878103 TCTGATCTACGCTACTCTTCACC 59.122 47.826 0.00 0.00 0.00 4.02
183 184 2.612672 TGATCTACGCTACTCTTCACCG 59.387 50.000 0.00 0.00 0.00 4.94
184 185 1.376543 TCTACGCTACTCTTCACCGG 58.623 55.000 0.00 0.00 0.00 5.28
185 186 0.381089 CTACGCTACTCTTCACCGGG 59.619 60.000 6.32 0.00 0.00 5.73
186 187 1.033746 TACGCTACTCTTCACCGGGG 61.034 60.000 6.32 0.00 0.00 5.73
187 188 2.187163 GCTACTCTTCACCGGGGC 59.813 66.667 6.32 0.00 0.00 5.80
188 189 2.494918 CTACTCTTCACCGGGGCG 59.505 66.667 6.32 0.00 0.00 6.13
189 190 2.036098 TACTCTTCACCGGGGCGA 59.964 61.111 6.32 0.00 0.00 5.54
190 191 1.380785 TACTCTTCACCGGGGCGAT 60.381 57.895 6.32 0.00 0.00 4.58
191 192 0.974010 TACTCTTCACCGGGGCGATT 60.974 55.000 6.32 0.00 0.00 3.34
192 193 1.815421 CTCTTCACCGGGGCGATTG 60.815 63.158 6.32 0.00 0.00 2.67
193 194 3.508840 CTTCACCGGGGCGATTGC 61.509 66.667 6.32 0.00 41.71 3.56
194 195 3.976701 CTTCACCGGGGCGATTGCT 62.977 63.158 6.32 0.00 42.25 3.91
195 196 4.776322 TCACCGGGGCGATTGCTG 62.776 66.667 6.32 0.00 42.25 4.41
197 198 4.344865 ACCGGGGCGATTGCTGTT 62.345 61.111 6.32 0.00 42.25 3.16
198 199 3.508840 CCGGGGCGATTGCTGTTC 61.509 66.667 4.59 0.00 42.25 3.18
199 200 2.436646 CGGGGCGATTGCTGTTCT 60.437 61.111 4.59 0.00 42.25 3.01
200 201 2.753966 CGGGGCGATTGCTGTTCTG 61.754 63.158 4.59 0.00 42.25 3.02
201 202 2.486966 GGGCGATTGCTGTTCTGC 59.513 61.111 4.59 0.00 42.25 4.26
202 203 2.042831 GGGCGATTGCTGTTCTGCT 61.043 57.895 4.59 0.00 42.25 4.24
203 204 1.136147 GGCGATTGCTGTTCTGCTG 59.864 57.895 4.59 0.00 42.25 4.41
204 205 1.513586 GCGATTGCTGTTCTGCTGC 60.514 57.895 0.00 0.00 41.65 5.25
205 206 1.225936 CGATTGCTGTTCTGCTGCG 60.226 57.895 0.00 0.00 43.81 5.18
206 207 1.871772 GATTGCTGTTCTGCTGCGT 59.128 52.632 0.00 0.00 43.81 5.24
207 208 0.239347 GATTGCTGTTCTGCTGCGTT 59.761 50.000 0.00 0.00 43.81 4.84
208 209 0.039798 ATTGCTGTTCTGCTGCGTTG 60.040 50.000 0.00 0.00 43.81 4.10
209 210 2.062361 TTGCTGTTCTGCTGCGTTGG 62.062 55.000 0.00 0.00 43.81 3.77
210 211 2.546494 GCTGTTCTGCTGCGTTGGT 61.546 57.895 0.00 0.00 32.54 3.67
211 212 2.024918 CTGTTCTGCTGCGTTGGTT 58.975 52.632 0.00 0.00 0.00 3.67
212 213 0.381801 CTGTTCTGCTGCGTTGGTTT 59.618 50.000 0.00 0.00 0.00 3.27
213 214 0.814457 TGTTCTGCTGCGTTGGTTTT 59.186 45.000 0.00 0.00 0.00 2.43
214 215 2.017782 TGTTCTGCTGCGTTGGTTTTA 58.982 42.857 0.00 0.00 0.00 1.52
215 216 2.621055 TGTTCTGCTGCGTTGGTTTTAT 59.379 40.909 0.00 0.00 0.00 1.40
216 217 2.979813 GTTCTGCTGCGTTGGTTTTATG 59.020 45.455 0.00 0.00 0.00 1.90
217 218 1.539388 TCTGCTGCGTTGGTTTTATGG 59.461 47.619 0.00 0.00 0.00 2.74
218 219 0.600557 TGCTGCGTTGGTTTTATGGG 59.399 50.000 0.00 0.00 0.00 4.00
219 220 0.108851 GCTGCGTTGGTTTTATGGGG 60.109 55.000 0.00 0.00 0.00 4.96
220 221 0.108851 CTGCGTTGGTTTTATGGGGC 60.109 55.000 0.00 0.00 0.00 5.80
221 222 1.216977 GCGTTGGTTTTATGGGGCC 59.783 57.895 0.00 0.00 0.00 5.80
222 223 1.254975 GCGTTGGTTTTATGGGGCCT 61.255 55.000 0.84 0.00 0.00 5.19
223 224 1.262417 CGTTGGTTTTATGGGGCCTT 58.738 50.000 0.84 0.00 0.00 4.35
224 225 2.448453 CGTTGGTTTTATGGGGCCTTA 58.552 47.619 0.84 0.00 0.00 2.69
225 226 2.425668 CGTTGGTTTTATGGGGCCTTAG 59.574 50.000 0.84 0.00 0.00 2.18
226 227 2.153034 TGGTTTTATGGGGCCTTAGC 57.847 50.000 0.84 0.00 38.76 3.09
227 228 1.359474 TGGTTTTATGGGGCCTTAGCA 59.641 47.619 0.84 0.00 42.56 3.49
228 229 1.754803 GGTTTTATGGGGCCTTAGCAC 59.245 52.381 0.84 0.00 43.97 4.40
229 230 1.404035 GTTTTATGGGGCCTTAGCACG 59.596 52.381 0.84 0.00 46.55 5.34
230 231 0.913205 TTTATGGGGCCTTAGCACGA 59.087 50.000 0.84 0.00 46.55 4.35
231 232 0.179468 TTATGGGGCCTTAGCACGAC 59.821 55.000 0.84 0.00 46.55 4.34
232 233 2.023414 TATGGGGCCTTAGCACGACG 62.023 60.000 0.84 0.00 46.55 5.12
233 234 3.766691 GGGGCCTTAGCACGACGA 61.767 66.667 0.84 0.00 46.55 4.20
234 235 2.508663 GGGCCTTAGCACGACGAC 60.509 66.667 0.84 0.00 42.56 4.34
235 236 2.572284 GGCCTTAGCACGACGACT 59.428 61.111 0.00 0.59 42.56 4.18
236 237 1.080025 GGCCTTAGCACGACGACTT 60.080 57.895 0.00 0.00 42.56 3.01
237 238 1.077089 GGCCTTAGCACGACGACTTC 61.077 60.000 0.00 0.00 42.56 3.01
238 239 1.077089 GCCTTAGCACGACGACTTCC 61.077 60.000 0.00 0.00 39.53 3.46
239 240 0.526662 CCTTAGCACGACGACTTCCT 59.473 55.000 0.00 0.00 0.00 3.36
240 241 1.618861 CTTAGCACGACGACTTCCTG 58.381 55.000 0.00 0.00 0.00 3.86
241 242 1.199327 CTTAGCACGACGACTTCCTGA 59.801 52.381 0.00 0.00 0.00 3.86
242 243 0.520404 TAGCACGACGACTTCCTGAC 59.480 55.000 0.00 0.00 0.00 3.51
243 244 1.173444 AGCACGACGACTTCCTGACT 61.173 55.000 0.00 0.00 0.00 3.41
244 245 1.004277 GCACGACGACTTCCTGACTG 61.004 60.000 0.00 0.00 0.00 3.51
245 246 0.311165 CACGACGACTTCCTGACTGT 59.689 55.000 0.00 0.00 0.00 3.55
246 247 0.592148 ACGACGACTTCCTGACTGTC 59.408 55.000 0.00 0.00 0.00 3.51
247 248 0.875728 CGACGACTTCCTGACTGTCT 59.124 55.000 9.51 0.00 0.00 3.41
248 249 2.074576 CGACGACTTCCTGACTGTCTA 58.925 52.381 9.51 0.00 0.00 2.59
249 250 2.678836 CGACGACTTCCTGACTGTCTAT 59.321 50.000 9.51 0.00 0.00 1.98
250 251 3.127203 CGACGACTTCCTGACTGTCTATT 59.873 47.826 9.51 0.00 0.00 1.73
251 252 4.331992 CGACGACTTCCTGACTGTCTATTA 59.668 45.833 9.51 0.00 0.00 0.98
252 253 5.564048 ACGACTTCCTGACTGTCTATTAC 57.436 43.478 9.51 0.00 0.00 1.89
253 254 5.008331 ACGACTTCCTGACTGTCTATTACA 58.992 41.667 9.51 0.00 36.42 2.41
254 255 5.475909 ACGACTTCCTGACTGTCTATTACAA 59.524 40.000 9.51 0.00 37.74 2.41
255 256 5.800941 CGACTTCCTGACTGTCTATTACAAC 59.199 44.000 9.51 0.00 37.74 3.32
256 257 6.569801 CGACTTCCTGACTGTCTATTACAACA 60.570 42.308 9.51 0.00 37.74 3.33
257 258 7.062749 ACTTCCTGACTGTCTATTACAACAA 57.937 36.000 9.51 0.00 37.74 2.83
258 259 7.155328 ACTTCCTGACTGTCTATTACAACAAG 58.845 38.462 9.51 1.82 37.74 3.16
259 260 6.665992 TCCTGACTGTCTATTACAACAAGT 57.334 37.500 9.51 0.00 37.74 3.16
260 261 7.062749 TCCTGACTGTCTATTACAACAAGTT 57.937 36.000 9.51 0.00 37.74 2.66
261 262 7.506114 TCCTGACTGTCTATTACAACAAGTTT 58.494 34.615 9.51 0.00 37.74 2.66
262 263 7.990886 TCCTGACTGTCTATTACAACAAGTTTT 59.009 33.333 9.51 0.00 37.74 2.43
263 264 8.070171 CCTGACTGTCTATTACAACAAGTTTTG 58.930 37.037 9.51 0.00 37.74 2.44
265 266 8.609176 TGACTGTCTATTACAACAAGTTTTGTC 58.391 33.333 9.51 0.00 44.59 3.18
266 267 8.500753 ACTGTCTATTACAACAAGTTTTGTCA 57.499 30.769 6.68 0.00 44.59 3.58
267 268 8.612619 ACTGTCTATTACAACAAGTTTTGTCAG 58.387 33.333 6.68 8.76 44.59 3.51
268 269 7.925993 TGTCTATTACAACAAGTTTTGTCAGG 58.074 34.615 6.68 0.00 44.59 3.86
269 270 6.856426 GTCTATTACAACAAGTTTTGTCAGGC 59.144 38.462 6.68 3.20 44.59 4.85
270 271 5.852282 ATTACAACAAGTTTTGTCAGGCT 57.148 34.783 6.68 0.00 44.59 4.58
271 272 3.782889 ACAACAAGTTTTGTCAGGCTC 57.217 42.857 0.00 0.00 44.59 4.70
272 273 2.427095 ACAACAAGTTTTGTCAGGCTCC 59.573 45.455 0.00 0.00 44.59 4.70
273 274 1.308998 ACAAGTTTTGTCAGGCTCCG 58.691 50.000 0.00 0.00 40.56 4.63
274 275 0.593128 CAAGTTTTGTCAGGCTCCGG 59.407 55.000 0.00 0.00 0.00 5.14
275 276 0.182775 AAGTTTTGTCAGGCTCCGGT 59.817 50.000 0.00 0.00 0.00 5.28
276 277 0.250338 AGTTTTGTCAGGCTCCGGTC 60.250 55.000 0.00 0.00 0.00 4.79
277 278 0.534203 GTTTTGTCAGGCTCCGGTCA 60.534 55.000 0.00 0.00 0.00 4.02
278 279 0.250295 TTTTGTCAGGCTCCGGTCAG 60.250 55.000 0.00 0.00 0.00 3.51
279 280 2.111999 TTTGTCAGGCTCCGGTCAGG 62.112 60.000 0.00 0.00 42.97 3.86
288 289 4.130255 CCGGTCAGGAAGGGAGAA 57.870 61.111 0.00 0.00 45.00 2.87
289 290 2.609046 CCGGTCAGGAAGGGAGAAT 58.391 57.895 0.00 0.00 45.00 2.40
290 291 1.789523 CCGGTCAGGAAGGGAGAATA 58.210 55.000 0.00 0.00 45.00 1.75
291 292 2.116238 CCGGTCAGGAAGGGAGAATAA 58.884 52.381 0.00 0.00 45.00 1.40
292 293 2.158943 CCGGTCAGGAAGGGAGAATAAC 60.159 54.545 0.00 0.00 45.00 1.89
293 294 2.481449 CGGTCAGGAAGGGAGAATAACG 60.481 54.545 0.00 0.00 0.00 3.18
294 295 2.764572 GGTCAGGAAGGGAGAATAACGA 59.235 50.000 0.00 0.00 0.00 3.85
295 296 3.430513 GGTCAGGAAGGGAGAATAACGAC 60.431 52.174 0.00 0.00 0.00 4.34
296 297 2.426024 TCAGGAAGGGAGAATAACGACG 59.574 50.000 0.00 0.00 0.00 5.12
297 298 1.755380 AGGAAGGGAGAATAACGACGG 59.245 52.381 0.00 0.00 0.00 4.79
298 299 1.568606 GAAGGGAGAATAACGACGGC 58.431 55.000 0.00 0.00 0.00 5.68
299 300 0.179119 AAGGGAGAATAACGACGGCG 60.179 55.000 10.39 10.39 44.79 6.46
300 301 2.235699 GGGAGAATAACGACGGCGC 61.236 63.158 12.58 0.00 42.48 6.53
301 302 2.574222 GGAGAATAACGACGGCGCG 61.574 63.158 12.58 19.04 42.48 6.86
302 303 3.193746 GAGAATAACGACGGCGCGC 62.194 63.158 25.94 25.94 42.48 6.86
303 304 4.275344 GAATAACGACGGCGCGCC 62.275 66.667 39.82 39.82 42.48 6.53
304 305 4.807039 AATAACGACGGCGCGCCT 62.807 61.111 43.60 31.58 42.48 5.52
305 306 4.807039 ATAACGACGGCGCGCCTT 62.807 61.111 43.60 37.89 42.48 4.35
315 316 2.357517 CGCGCCTTCACCTCACTT 60.358 61.111 0.00 0.00 0.00 3.16
316 317 1.961277 CGCGCCTTCACCTCACTTT 60.961 57.895 0.00 0.00 0.00 2.66
317 318 0.669318 CGCGCCTTCACCTCACTTTA 60.669 55.000 0.00 0.00 0.00 1.85
318 319 1.079503 GCGCCTTCACCTCACTTTAG 58.920 55.000 0.00 0.00 0.00 1.85
319 320 1.608283 GCGCCTTCACCTCACTTTAGT 60.608 52.381 0.00 0.00 0.00 2.24
320 321 2.353406 GCGCCTTCACCTCACTTTAGTA 60.353 50.000 0.00 0.00 0.00 1.82
321 322 3.251571 CGCCTTCACCTCACTTTAGTAC 58.748 50.000 0.00 0.00 0.00 2.73
322 323 3.056749 CGCCTTCACCTCACTTTAGTACT 60.057 47.826 0.00 0.00 0.00 2.73
323 324 4.560919 CGCCTTCACCTCACTTTAGTACTT 60.561 45.833 0.00 0.00 0.00 2.24
324 325 4.691216 GCCTTCACCTCACTTTAGTACTTG 59.309 45.833 0.00 0.00 0.00 3.16
325 326 5.742255 GCCTTCACCTCACTTTAGTACTTGT 60.742 44.000 0.00 0.00 0.00 3.16
326 327 6.517864 GCCTTCACCTCACTTTAGTACTTGTA 60.518 42.308 0.00 0.00 0.00 2.41
327 328 7.091443 CCTTCACCTCACTTTAGTACTTGTAG 58.909 42.308 0.00 0.00 0.00 2.74
328 329 7.255871 CCTTCACCTCACTTTAGTACTTGTAGT 60.256 40.741 0.00 0.00 0.00 2.73
329 330 7.211966 TCACCTCACTTTAGTACTTGTAGTC 57.788 40.000 0.00 0.00 0.00 2.59
330 331 6.072838 TCACCTCACTTTAGTACTTGTAGTCG 60.073 42.308 0.00 0.00 0.00 4.18
331 332 5.767168 ACCTCACTTTAGTACTTGTAGTCGT 59.233 40.000 0.00 0.00 0.00 4.34
332 333 6.072783 ACCTCACTTTAGTACTTGTAGTCGTC 60.073 42.308 0.00 0.00 0.00 4.20
333 334 5.920312 TCACTTTAGTACTTGTAGTCGTCG 58.080 41.667 0.00 0.00 0.00 5.12
334 335 4.552660 CACTTTAGTACTTGTAGTCGTCGC 59.447 45.833 0.00 0.00 0.00 5.19
335 336 4.214119 ACTTTAGTACTTGTAGTCGTCGCA 59.786 41.667 0.00 0.00 0.00 5.10
336 337 4.747540 TTAGTACTTGTAGTCGTCGCAA 57.252 40.909 0.00 0.00 0.00 4.85
337 338 2.926165 AGTACTTGTAGTCGTCGCAAC 58.074 47.619 0.00 0.00 0.00 4.17
338 339 2.291465 AGTACTTGTAGTCGTCGCAACA 59.709 45.455 0.00 0.00 0.00 3.33
339 340 2.433868 ACTTGTAGTCGTCGCAACAT 57.566 45.000 0.00 0.00 0.00 2.71
340 341 2.058798 ACTTGTAGTCGTCGCAACATG 58.941 47.619 0.00 0.00 0.00 3.21
341 342 1.390123 CTTGTAGTCGTCGCAACATGG 59.610 52.381 0.00 0.00 0.00 3.66
342 343 0.315886 TGTAGTCGTCGCAACATGGT 59.684 50.000 0.00 0.00 0.00 3.55
343 344 0.989890 GTAGTCGTCGCAACATGGTC 59.010 55.000 0.00 0.00 0.00 4.02
344 345 0.885879 TAGTCGTCGCAACATGGTCT 59.114 50.000 0.00 0.00 0.00 3.85
345 346 0.885879 AGTCGTCGCAACATGGTCTA 59.114 50.000 0.00 0.00 0.00 2.59
346 347 0.989890 GTCGTCGCAACATGGTCTAC 59.010 55.000 0.00 0.00 0.00 2.59
347 348 0.455464 TCGTCGCAACATGGTCTACG 60.455 55.000 0.00 0.00 0.00 3.51
348 349 1.410737 CGTCGCAACATGGTCTACGG 61.411 60.000 0.00 0.00 0.00 4.02
349 350 0.108992 GTCGCAACATGGTCTACGGA 60.109 55.000 0.00 0.00 0.00 4.69
350 351 0.821517 TCGCAACATGGTCTACGGAT 59.178 50.000 0.00 0.00 0.00 4.18
351 352 1.202371 TCGCAACATGGTCTACGGATC 60.202 52.381 0.00 0.00 0.00 3.36
352 353 1.202417 CGCAACATGGTCTACGGATCT 60.202 52.381 0.00 0.00 0.00 2.75
353 354 2.205074 GCAACATGGTCTACGGATCTG 58.795 52.381 0.00 0.00 0.00 2.90
354 355 2.159099 GCAACATGGTCTACGGATCTGA 60.159 50.000 9.00 0.00 0.00 3.27
355 356 3.678806 GCAACATGGTCTACGGATCTGAA 60.679 47.826 9.00 0.00 0.00 3.02
356 357 4.697514 CAACATGGTCTACGGATCTGAAT 58.302 43.478 9.00 0.00 0.00 2.57
357 358 4.327982 ACATGGTCTACGGATCTGAATG 57.672 45.455 9.00 4.87 0.00 2.67
358 359 3.706594 ACATGGTCTACGGATCTGAATGT 59.293 43.478 9.00 5.44 0.00 2.71
359 360 4.893524 ACATGGTCTACGGATCTGAATGTA 59.106 41.667 9.00 0.00 0.00 2.29
360 361 5.362717 ACATGGTCTACGGATCTGAATGTAA 59.637 40.000 9.00 0.00 0.00 2.41
361 362 6.042093 ACATGGTCTACGGATCTGAATGTAAT 59.958 38.462 9.00 0.00 0.00 1.89
362 363 6.479972 TGGTCTACGGATCTGAATGTAATT 57.520 37.500 9.00 0.00 40.93 1.40
363 364 6.884832 TGGTCTACGGATCTGAATGTAATTT 58.115 36.000 9.00 0.00 36.07 1.82
364 365 7.335627 TGGTCTACGGATCTGAATGTAATTTT 58.664 34.615 9.00 0.00 36.07 1.82
365 366 7.827236 TGGTCTACGGATCTGAATGTAATTTTT 59.173 33.333 9.00 0.00 36.07 1.94
366 367 9.321562 GGTCTACGGATCTGAATGTAATTTTTA 57.678 33.333 9.00 0.00 36.07 1.52
389 390 6.920569 ATTATTTCTGATGTCCGTTGTACC 57.079 37.500 0.00 0.00 0.00 3.34
390 391 2.357327 TTCTGATGTCCGTTGTACCG 57.643 50.000 0.00 0.00 0.00 4.02
391 392 1.250328 TCTGATGTCCGTTGTACCGT 58.750 50.000 0.00 0.00 0.00 4.83
392 393 1.200716 TCTGATGTCCGTTGTACCGTC 59.799 52.381 0.00 0.00 0.00 4.79
393 394 0.960286 TGATGTCCGTTGTACCGTCA 59.040 50.000 0.00 0.00 0.00 4.35
394 395 1.546923 TGATGTCCGTTGTACCGTCAT 59.453 47.619 0.00 0.00 0.00 3.06
395 396 1.924524 GATGTCCGTTGTACCGTCATG 59.075 52.381 0.00 0.00 0.00 3.07
396 397 0.960286 TGTCCGTTGTACCGTCATGA 59.040 50.000 0.00 0.00 0.00 3.07
397 398 1.546923 TGTCCGTTGTACCGTCATGAT 59.453 47.619 0.00 0.00 0.00 2.45
398 399 2.028839 TGTCCGTTGTACCGTCATGATT 60.029 45.455 0.00 0.00 0.00 2.57
399 400 2.347452 GTCCGTTGTACCGTCATGATTG 59.653 50.000 0.00 0.00 0.00 2.67
400 401 2.231721 TCCGTTGTACCGTCATGATTGA 59.768 45.455 0.00 0.00 0.00 2.57
401 402 2.997303 CCGTTGTACCGTCATGATTGAA 59.003 45.455 0.00 0.00 32.48 2.69
402 403 3.062099 CCGTTGTACCGTCATGATTGAAG 59.938 47.826 0.00 0.00 32.48 3.02
403 404 3.924073 CGTTGTACCGTCATGATTGAAGA 59.076 43.478 0.00 0.00 33.71 2.87
404 405 4.201589 CGTTGTACCGTCATGATTGAAGAC 60.202 45.833 0.00 0.00 33.71 3.01
414 415 7.936950 GTCATGATTGAAGACGAATAGATCA 57.063 36.000 0.00 0.00 32.48 2.92
415 416 8.357796 GTCATGATTGAAGACGAATAGATCAA 57.642 34.615 0.00 0.00 34.80 2.57
416 417 8.820933 GTCATGATTGAAGACGAATAGATCAAA 58.179 33.333 0.00 0.00 34.09 2.69
417 418 9.382275 TCATGATTGAAGACGAATAGATCAAAA 57.618 29.630 0.00 0.00 34.09 2.44
418 419 9.647679 CATGATTGAAGACGAATAGATCAAAAG 57.352 33.333 0.00 0.00 34.09 2.27
419 420 8.777865 TGATTGAAGACGAATAGATCAAAAGT 57.222 30.769 0.00 0.00 34.09 2.66
420 421 9.219603 TGATTGAAGACGAATAGATCAAAAGTT 57.780 29.630 0.00 0.00 34.09 2.66
424 425 9.878599 TGAAGACGAATAGATCAAAAGTTTTTC 57.121 29.630 0.00 0.00 0.00 2.29
425 426 8.934973 AAGACGAATAGATCAAAAGTTTTTCG 57.065 30.769 12.43 12.43 40.20 3.46
426 427 7.519002 AGACGAATAGATCAAAAGTTTTTCGG 58.481 34.615 16.39 0.89 39.07 4.30
427 428 7.386848 AGACGAATAGATCAAAAGTTTTTCGGA 59.613 33.333 16.39 5.60 39.07 4.55
428 429 7.867752 ACGAATAGATCAAAAGTTTTTCGGAA 58.132 30.769 16.39 0.00 39.07 4.30
429 430 8.347035 ACGAATAGATCAAAAGTTTTTCGGAAA 58.653 29.630 16.39 0.00 39.07 3.13
430 431 9.176181 CGAATAGATCAAAAGTTTTTCGGAAAA 57.824 29.630 11.68 11.68 33.15 2.29
455 456 7.625828 ATTAGTAGTTGTAGGGATGTTTTGC 57.374 36.000 0.00 0.00 0.00 3.68
462 463 0.112995 AGGGATGTTTTGCTGCCTCA 59.887 50.000 0.00 0.00 0.00 3.86
525 526 0.529378 GATTTCTGCCTGCCTTGGTG 59.471 55.000 0.00 0.00 0.00 4.17
530 531 2.352805 GCCTGCCTTGGTGCTAGT 59.647 61.111 0.00 0.00 0.00 2.57
547 548 6.406400 GGTGCTAGTCATGTTCTTAGACATCT 60.406 42.308 0.00 0.00 38.15 2.90
616 636 8.723777 ATAAAACAAGCTAAGTTAAACTTCGC 57.276 30.769 5.05 0.00 44.35 4.70
643 663 3.238497 TCTGACCCCACCACCACG 61.238 66.667 0.00 0.00 0.00 4.94
654 674 2.006888 CACCACCACGCCAGTATAAAG 58.993 52.381 0.00 0.00 0.00 1.85
662 682 0.380733 GCCAGTATAAAGCCAACGCC 59.619 55.000 0.00 0.00 34.57 5.68
666 686 2.486203 CAGTATAAAGCCAACGCCAACA 59.514 45.455 0.00 0.00 34.57 3.33
719 739 3.149196 ACTGCACCTAATCACAAGTTGG 58.851 45.455 7.96 0.00 0.00 3.77
861 886 0.466189 CACCTCCCGCATGCCTTAAT 60.466 55.000 13.15 0.00 0.00 1.40
926 951 1.373497 CAGTCACGTGCTGTCCTCC 60.373 63.158 23.38 2.39 0.00 4.30
927 952 1.531840 AGTCACGTGCTGTCCTCCT 60.532 57.895 11.67 0.00 0.00 3.69
928 953 1.080434 GTCACGTGCTGTCCTCCTC 60.080 63.158 11.67 0.00 0.00 3.71
933 958 1.216710 GTGCTGTCCTCCTCCTTCG 59.783 63.158 0.00 0.00 0.00 3.79
1055 1089 2.660064 GCGGCAGGAGGAAGGAGAA 61.660 63.158 0.00 0.00 0.00 2.87
1060 1094 2.183679 GCAGGAGGAAGGAGAAGAAGA 58.816 52.381 0.00 0.00 0.00 2.87
1347 1387 2.048222 CGCAAGAACGGCTCAGGA 60.048 61.111 0.00 0.00 43.02 3.86
1477 1518 0.587242 TCGCGCGTACGTAGAATGAC 60.587 55.000 30.98 0.00 42.83 3.06
1520 1561 8.582433 AAATTAAACTAGCTAGATCGCTTCTC 57.418 34.615 27.45 0.00 41.30 2.87
1521 1562 6.945938 TTAAACTAGCTAGATCGCTTCTCT 57.054 37.500 27.45 0.38 41.30 3.10
1528 1569 3.732471 GCTAGATCGCTTCTCTCGTTTGT 60.732 47.826 0.00 0.00 35.79 2.83
1592 1633 1.063166 GCTTAGCTTCGTGCATGGC 59.937 57.895 5.98 2.31 45.94 4.40
1627 1668 4.764679 TCGTTGGTTTCATGGAAGATTG 57.235 40.909 0.00 0.00 0.00 2.67
1643 1684 7.000472 TGGAAGATTGGAAGTTCATATCATCC 59.000 38.462 21.76 21.76 35.02 3.51
1644 1685 6.148480 GGAAGATTGGAAGTTCATATCATCCG 59.852 42.308 17.56 0.00 32.72 4.18
1650 1691 4.580580 GGAAGTTCATATCATCCGCCTTTT 59.419 41.667 5.01 0.00 0.00 2.27
1665 1706 4.109050 CGCCTTTTGTTTTTACTGCTGAA 58.891 39.130 0.00 0.00 0.00 3.02
1676 1717 0.670162 ACTGCTGAATTGCACACACC 59.330 50.000 0.00 0.00 38.12 4.16
1719 1771 5.690409 ACGGATGTCGCAAAGTAACATATAG 59.310 40.000 0.00 0.00 43.89 1.31
1725 1777 6.908820 TGTCGCAAAGTAACATATAGTACTCG 59.091 38.462 0.00 0.00 0.00 4.18
1726 1778 7.128331 GTCGCAAAGTAACATATAGTACTCGA 58.872 38.462 0.00 0.00 0.00 4.04
1757 1820 5.008613 TCTCTTTGGAATGACAGGAAAAACG 59.991 40.000 0.00 0.00 0.00 3.60
1849 1916 4.096984 GGGGACTATTTCAGCTTCAATGTG 59.903 45.833 0.00 0.00 0.00 3.21
2031 2098 8.974060 TTTTGTGTGGAAGAATAGAAACTACT 57.026 30.769 0.00 0.00 0.00 2.57
2032 2099 7.962964 TTGTGTGGAAGAATAGAAACTACTG 57.037 36.000 0.00 0.00 0.00 2.74
2033 2100 5.932303 TGTGTGGAAGAATAGAAACTACTGC 59.068 40.000 0.00 0.00 0.00 4.40
2034 2101 5.062308 GTGTGGAAGAATAGAAACTACTGCG 59.938 44.000 0.00 0.00 0.00 5.18
2035 2102 4.033014 GTGGAAGAATAGAAACTACTGCGC 59.967 45.833 0.00 0.00 0.00 6.09
2036 2103 4.181578 GGAAGAATAGAAACTACTGCGCA 58.818 43.478 10.98 10.98 0.00 6.09
2060 2127 7.221452 GCACATGATGATTCCTTGTACAAAATC 59.779 37.037 19.51 19.51 0.00 2.17
2066 2133 1.801771 TCCTTGTACAAAATCCGCACG 59.198 47.619 10.03 0.00 0.00 5.34
2073 2140 1.202114 ACAAAATCCGCACGATGCAAT 59.798 42.857 9.95 1.44 45.36 3.56
2099 2166 0.880278 TGGTCGCTGCACTTTCAGTC 60.880 55.000 0.00 0.00 36.49 3.51
2132 2199 5.629079 ACGATTCGATCTGCTACATCATA 57.371 39.130 13.95 0.00 0.00 2.15
2139 2206 7.643528 TCGATCTGCTACATCATACAAAATC 57.356 36.000 0.00 0.00 0.00 2.17
2141 2208 6.400409 CGATCTGCTACATCATACAAAATCCG 60.400 42.308 0.00 0.00 0.00 4.18
2155 2222 4.506654 ACAAAATCCGTCCGAGAAATATCG 59.493 41.667 0.00 0.00 42.36 2.92
2160 2227 1.003116 CGTCCGAGAAATATCGTCCGT 60.003 52.381 0.00 0.00 41.12 4.69
2161 2228 2.221749 CGTCCGAGAAATATCGTCCGTA 59.778 50.000 0.00 0.00 41.12 4.02
2166 2233 7.343691 GTCCGAGAAATATCGTCCGTATATAG 58.656 42.308 0.00 0.00 41.12 1.31
2188 2255 4.034858 AGCACTGCTCAATACGAATTCATG 59.965 41.667 6.22 0.00 30.62 3.07
2189 2256 4.034394 GCACTGCTCAATACGAATTCATGA 59.966 41.667 6.22 0.00 0.00 3.07
2198 2265 6.311200 TCAATACGAATTCATGATATGCCTCG 59.689 38.462 6.22 1.99 34.08 4.63
2262 2329 8.593945 AATTTGAGGAGCCTTTGTATATTTGA 57.406 30.769 0.00 0.00 0.00 2.69
2288 2355 7.788026 ACGAAGGGAATACTAACACAATATGA 58.212 34.615 0.00 0.00 0.00 2.15
2341 2408 9.860898 AGCAATAATTCAGGTTCACTATTTTTC 57.139 29.630 0.00 0.00 0.00 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.133941 GGGGGAGAACCTTATTTCATCTTC 58.866 45.833 0.00 0.00 40.03 2.87
20 21 1.215423 CATTGGAAAGGGTCTAGGGGG 59.785 57.143 0.00 0.00 0.00 5.40
21 22 1.215423 CCATTGGAAAGGGTCTAGGGG 59.785 57.143 0.00 0.00 44.18 4.79
22 23 2.736670 CCATTGGAAAGGGTCTAGGG 57.263 55.000 0.00 0.00 44.18 3.53
30 31 2.749621 GCTAGACACACCATTGGAAAGG 59.250 50.000 10.37 0.00 0.00 3.11
31 32 3.411446 TGCTAGACACACCATTGGAAAG 58.589 45.455 10.37 1.39 0.00 2.62
32 33 3.500448 TGCTAGACACACCATTGGAAA 57.500 42.857 10.37 0.00 0.00 3.13
33 34 3.008923 TGATGCTAGACACACCATTGGAA 59.991 43.478 10.37 0.00 0.00 3.53
34 35 2.571202 TGATGCTAGACACACCATTGGA 59.429 45.455 10.37 0.00 0.00 3.53
35 36 2.989909 TGATGCTAGACACACCATTGG 58.010 47.619 0.00 0.00 0.00 3.16
36 37 3.562973 GGATGATGCTAGACACACCATTG 59.437 47.826 0.00 0.00 0.00 2.82
37 38 3.742327 CGGATGATGCTAGACACACCATT 60.742 47.826 0.00 0.00 0.00 3.16
38 39 2.224137 CGGATGATGCTAGACACACCAT 60.224 50.000 0.00 0.00 0.00 3.55
39 40 1.136891 CGGATGATGCTAGACACACCA 59.863 52.381 0.00 0.00 0.00 4.17
40 41 1.137086 ACGGATGATGCTAGACACACC 59.863 52.381 0.00 0.00 0.00 4.16
41 42 2.196749 CACGGATGATGCTAGACACAC 58.803 52.381 0.00 0.00 0.00 3.82
42 43 1.136891 CCACGGATGATGCTAGACACA 59.863 52.381 0.00 0.00 0.00 3.72
43 44 1.539065 CCCACGGATGATGCTAGACAC 60.539 57.143 0.00 0.00 0.00 3.67
44 45 0.752658 CCCACGGATGATGCTAGACA 59.247 55.000 0.00 0.00 0.00 3.41
45 46 0.601311 GCCCACGGATGATGCTAGAC 60.601 60.000 0.00 0.00 0.00 2.59
46 47 1.748403 GCCCACGGATGATGCTAGA 59.252 57.895 0.00 0.00 0.00 2.43
47 48 1.665916 CGCCCACGGATGATGCTAG 60.666 63.158 0.00 0.00 34.97 3.42
48 49 2.421314 CGCCCACGGATGATGCTA 59.579 61.111 0.00 0.00 34.97 3.49
49 50 3.785859 ACGCCCACGGATGATGCT 61.786 61.111 0.00 0.00 46.04 3.79
50 51 3.576356 CACGCCCACGGATGATGC 61.576 66.667 0.00 0.00 46.04 3.91
51 52 2.125147 ACACGCCCACGGATGATG 60.125 61.111 0.00 0.00 46.04 3.07
52 53 2.125147 CACACGCCCACGGATGAT 60.125 61.111 0.00 0.00 46.04 2.45
53 54 2.779951 CTTCACACGCCCACGGATGA 62.780 60.000 0.00 0.00 46.04 2.92
54 55 2.358125 TTCACACGCCCACGGATG 60.358 61.111 0.00 0.00 46.04 3.51
55 56 2.047274 CTTCACACGCCCACGGAT 60.047 61.111 0.00 0.00 46.04 4.18
56 57 4.308458 CCTTCACACGCCCACGGA 62.308 66.667 0.00 0.00 46.04 4.69
57 58 4.619227 ACCTTCACACGCCCACGG 62.619 66.667 0.00 0.00 46.04 4.94
59 60 2.203153 ACACCTTCACACGCCCAC 60.203 61.111 0.00 0.00 0.00 4.61
60 61 2.203139 CACACCTTCACACGCCCA 60.203 61.111 0.00 0.00 0.00 5.36
61 62 2.203153 ACACACCTTCACACGCCC 60.203 61.111 0.00 0.00 0.00 6.13
62 63 1.222115 GAGACACACCTTCACACGCC 61.222 60.000 0.00 0.00 0.00 5.68
63 64 0.249489 AGAGACACACCTTCACACGC 60.249 55.000 0.00 0.00 0.00 5.34
64 65 1.491670 CAGAGACACACCTTCACACG 58.508 55.000 0.00 0.00 0.00 4.49
65 66 1.139058 ACCAGAGACACACCTTCACAC 59.861 52.381 0.00 0.00 0.00 3.82
66 67 1.138859 CACCAGAGACACACCTTCACA 59.861 52.381 0.00 0.00 0.00 3.58
67 68 1.541233 CCACCAGAGACACACCTTCAC 60.541 57.143 0.00 0.00 0.00 3.18
68 69 0.758734 CCACCAGAGACACACCTTCA 59.241 55.000 0.00 0.00 0.00 3.02
69 70 1.048601 TCCACCAGAGACACACCTTC 58.951 55.000 0.00 0.00 0.00 3.46
70 71 1.625818 GATCCACCAGAGACACACCTT 59.374 52.381 0.00 0.00 0.00 3.50
71 72 1.203237 AGATCCACCAGAGACACACCT 60.203 52.381 0.00 0.00 0.00 4.00
72 73 1.270907 AGATCCACCAGAGACACACC 58.729 55.000 0.00 0.00 0.00 4.16
73 74 6.412362 AATATAGATCCACCAGAGACACAC 57.588 41.667 0.00 0.00 0.00 3.82
74 75 6.183361 CCAAATATAGATCCACCAGAGACACA 60.183 42.308 0.00 0.00 0.00 3.72
75 76 6.183361 ACCAAATATAGATCCACCAGAGACAC 60.183 42.308 0.00 0.00 0.00 3.67
76 77 5.905331 ACCAAATATAGATCCACCAGAGACA 59.095 40.000 0.00 0.00 0.00 3.41
77 78 6.226787 CACCAAATATAGATCCACCAGAGAC 58.773 44.000 0.00 0.00 0.00 3.36
78 79 5.307976 CCACCAAATATAGATCCACCAGAGA 59.692 44.000 0.00 0.00 0.00 3.10
79 80 5.307976 TCCACCAAATATAGATCCACCAGAG 59.692 44.000 0.00 0.00 0.00 3.35
80 81 5.223655 TCCACCAAATATAGATCCACCAGA 58.776 41.667 0.00 0.00 0.00 3.86
81 82 5.567037 TCCACCAAATATAGATCCACCAG 57.433 43.478 0.00 0.00 0.00 4.00
82 83 6.529084 AATCCACCAAATATAGATCCACCA 57.471 37.500 0.00 0.00 0.00 4.17
83 84 6.294731 GCAAATCCACCAAATATAGATCCACC 60.295 42.308 0.00 0.00 0.00 4.61
84 85 6.491403 AGCAAATCCACCAAATATAGATCCAC 59.509 38.462 0.00 0.00 0.00 4.02
85 86 6.613699 AGCAAATCCACCAAATATAGATCCA 58.386 36.000 0.00 0.00 0.00 3.41
86 87 6.128172 CGAGCAAATCCACCAAATATAGATCC 60.128 42.308 0.00 0.00 0.00 3.36
87 88 6.128172 CCGAGCAAATCCACCAAATATAGATC 60.128 42.308 0.00 0.00 0.00 2.75
88 89 5.707298 CCGAGCAAATCCACCAAATATAGAT 59.293 40.000 0.00 0.00 0.00 1.98
89 90 5.063204 CCGAGCAAATCCACCAAATATAGA 58.937 41.667 0.00 0.00 0.00 1.98
90 91 5.063204 TCCGAGCAAATCCACCAAATATAG 58.937 41.667 0.00 0.00 0.00 1.31
91 92 5.042463 TCCGAGCAAATCCACCAAATATA 57.958 39.130 0.00 0.00 0.00 0.86
92 93 3.897239 TCCGAGCAAATCCACCAAATAT 58.103 40.909 0.00 0.00 0.00 1.28
93 94 3.358111 TCCGAGCAAATCCACCAAATA 57.642 42.857 0.00 0.00 0.00 1.40
94 95 2.214376 TCCGAGCAAATCCACCAAAT 57.786 45.000 0.00 0.00 0.00 2.32
95 96 2.091541 GATCCGAGCAAATCCACCAAA 58.908 47.619 0.00 0.00 0.00 3.28
96 97 1.281867 AGATCCGAGCAAATCCACCAA 59.718 47.619 0.00 0.00 0.00 3.67
97 98 0.911769 AGATCCGAGCAAATCCACCA 59.088 50.000 0.00 0.00 0.00 4.17
98 99 2.103263 ACTAGATCCGAGCAAATCCACC 59.897 50.000 0.00 0.00 0.00 4.61
99 100 3.385577 GACTAGATCCGAGCAAATCCAC 58.614 50.000 0.00 0.00 0.00 4.02
100 101 2.034685 CGACTAGATCCGAGCAAATCCA 59.965 50.000 0.00 0.00 0.00 3.41
101 102 2.034812 ACGACTAGATCCGAGCAAATCC 59.965 50.000 0.00 0.00 0.00 3.01
102 103 3.357166 ACGACTAGATCCGAGCAAATC 57.643 47.619 0.00 0.00 0.00 2.17
103 104 3.884091 ACTACGACTAGATCCGAGCAAAT 59.116 43.478 0.00 0.00 0.00 2.32
104 105 3.276857 ACTACGACTAGATCCGAGCAAA 58.723 45.455 0.00 0.00 0.00 3.68
105 106 2.915349 ACTACGACTAGATCCGAGCAA 58.085 47.619 0.00 0.00 0.00 3.91
106 107 2.616634 ACTACGACTAGATCCGAGCA 57.383 50.000 0.00 0.00 0.00 4.26
107 108 2.096811 CGAACTACGACTAGATCCGAGC 60.097 54.545 0.00 0.00 45.77 5.03
108 109 3.122297 ACGAACTACGACTAGATCCGAG 58.878 50.000 0.00 0.00 45.77 4.63
109 110 3.119291 GACGAACTACGACTAGATCCGA 58.881 50.000 0.00 0.00 45.77 4.55
110 111 3.122297 AGACGAACTACGACTAGATCCG 58.878 50.000 0.00 0.00 43.88 4.18
111 112 5.574815 GTAGACGAACTACGACTAGATCC 57.425 47.826 0.00 0.00 45.74 3.36
121 122 4.470462 ACACATGAACGTAGACGAACTAC 58.530 43.478 9.41 12.05 45.56 2.73
122 123 4.754372 ACACATGAACGTAGACGAACTA 57.246 40.909 9.41 0.00 43.02 2.24
123 124 3.637998 ACACATGAACGTAGACGAACT 57.362 42.857 9.41 0.00 43.02 3.01
124 125 4.703899 AAACACATGAACGTAGACGAAC 57.296 40.909 9.41 3.01 43.02 3.95
125 126 4.804665 TGAAAACACATGAACGTAGACGAA 59.195 37.500 9.41 0.00 43.02 3.85
126 127 4.361420 TGAAAACACATGAACGTAGACGA 58.639 39.130 9.41 0.00 43.02 4.20
127 128 4.376008 CCTGAAAACACATGAACGTAGACG 60.376 45.833 0.00 0.00 46.33 4.18
128 129 4.510340 ACCTGAAAACACATGAACGTAGAC 59.490 41.667 0.00 0.00 0.00 2.59
129 130 4.699637 ACCTGAAAACACATGAACGTAGA 58.300 39.130 0.00 0.00 0.00 2.59
130 131 5.204833 CAACCTGAAAACACATGAACGTAG 58.795 41.667 0.00 0.00 0.00 3.51
131 132 4.035792 CCAACCTGAAAACACATGAACGTA 59.964 41.667 0.00 0.00 0.00 3.57
132 133 3.181491 CCAACCTGAAAACACATGAACGT 60.181 43.478 0.00 0.00 0.00 3.99
133 134 3.066064 TCCAACCTGAAAACACATGAACG 59.934 43.478 0.00 0.00 0.00 3.95
134 135 4.647424 TCCAACCTGAAAACACATGAAC 57.353 40.909 0.00 0.00 0.00 3.18
135 136 4.280677 GGATCCAACCTGAAAACACATGAA 59.719 41.667 6.95 0.00 0.00 2.57
136 137 3.826157 GGATCCAACCTGAAAACACATGA 59.174 43.478 6.95 0.00 0.00 3.07
137 138 3.828451 AGGATCCAACCTGAAAACACATG 59.172 43.478 15.82 0.00 39.01 3.21
138 139 4.118168 AGGATCCAACCTGAAAACACAT 57.882 40.909 15.82 0.00 39.01 3.21
139 140 3.593442 AGGATCCAACCTGAAAACACA 57.407 42.857 15.82 0.00 39.01 3.72
140 141 4.022849 CAGAAGGATCCAACCTGAAAACAC 60.023 45.833 15.82 0.00 40.49 3.32
141 142 4.141274 TCAGAAGGATCCAACCTGAAAACA 60.141 41.667 21.14 5.67 40.49 2.83
142 143 4.398319 TCAGAAGGATCCAACCTGAAAAC 58.602 43.478 21.14 0.91 40.49 2.43
143 144 4.722526 TCAGAAGGATCCAACCTGAAAA 57.277 40.909 21.14 6.22 40.49 2.29
144 145 4.848357 GATCAGAAGGATCCAACCTGAAA 58.152 43.478 24.76 11.22 45.58 2.69
145 146 4.494091 GATCAGAAGGATCCAACCTGAA 57.506 45.455 24.76 14.17 45.58 3.02
155 156 4.980573 AGAGTAGCGTAGATCAGAAGGAT 58.019 43.478 0.00 0.00 39.53 3.24
156 157 4.425180 AGAGTAGCGTAGATCAGAAGGA 57.575 45.455 0.00 0.00 0.00 3.36
157 158 4.576873 TGAAGAGTAGCGTAGATCAGAAGG 59.423 45.833 0.00 0.00 0.00 3.46
158 159 5.504994 GGTGAAGAGTAGCGTAGATCAGAAG 60.505 48.000 0.00 0.00 0.00 2.85
159 160 4.335874 GGTGAAGAGTAGCGTAGATCAGAA 59.664 45.833 0.00 0.00 0.00 3.02
160 161 3.878103 GGTGAAGAGTAGCGTAGATCAGA 59.122 47.826 0.00 0.00 0.00 3.27
161 162 3.303461 CGGTGAAGAGTAGCGTAGATCAG 60.303 52.174 0.00 0.00 34.64 2.90
162 163 2.612672 CGGTGAAGAGTAGCGTAGATCA 59.387 50.000 0.00 0.00 34.64 2.92
163 164 2.031857 CCGGTGAAGAGTAGCGTAGATC 60.032 54.545 0.00 0.00 37.34 2.75
164 165 1.948145 CCGGTGAAGAGTAGCGTAGAT 59.052 52.381 0.00 0.00 37.34 1.98
165 166 1.376543 CCGGTGAAGAGTAGCGTAGA 58.623 55.000 0.00 0.00 37.34 2.59
166 167 0.381089 CCCGGTGAAGAGTAGCGTAG 59.619 60.000 0.00 0.00 37.34 3.51
167 168 1.033746 CCCCGGTGAAGAGTAGCGTA 61.034 60.000 0.00 0.00 37.34 4.42
168 169 2.348888 CCCCGGTGAAGAGTAGCGT 61.349 63.158 0.00 0.00 37.34 5.07
169 170 2.494918 CCCCGGTGAAGAGTAGCG 59.505 66.667 0.00 0.00 38.63 4.26
170 171 2.187163 GCCCCGGTGAAGAGTAGC 59.813 66.667 0.00 0.00 0.00 3.58
171 172 1.392710 ATCGCCCCGGTGAAGAGTAG 61.393 60.000 0.00 0.00 38.20 2.57
172 173 0.974010 AATCGCCCCGGTGAAGAGTA 60.974 55.000 0.00 0.00 38.20 2.59
173 174 2.291043 AATCGCCCCGGTGAAGAGT 61.291 57.895 0.00 0.00 38.20 3.24
174 175 1.815421 CAATCGCCCCGGTGAAGAG 60.815 63.158 0.00 0.00 38.20 2.85
175 176 2.267642 CAATCGCCCCGGTGAAGA 59.732 61.111 0.00 0.00 38.20 2.87
176 177 3.508840 GCAATCGCCCCGGTGAAG 61.509 66.667 0.00 0.00 38.20 3.02
177 178 4.028490 AGCAATCGCCCCGGTGAA 62.028 61.111 0.00 0.00 39.83 3.18
178 179 4.776322 CAGCAATCGCCCCGGTGA 62.776 66.667 0.00 0.00 39.83 4.02
180 181 4.344865 AACAGCAATCGCCCCGGT 62.345 61.111 0.00 0.00 39.83 5.28
181 182 3.508840 GAACAGCAATCGCCCCGG 61.509 66.667 0.00 0.00 39.83 5.73
182 183 2.436646 AGAACAGCAATCGCCCCG 60.437 61.111 0.00 0.00 39.83 5.73
183 184 3.056313 GCAGAACAGCAATCGCCCC 62.056 63.158 0.00 0.00 39.83 5.80
184 185 2.042831 AGCAGAACAGCAATCGCCC 61.043 57.895 0.00 0.00 39.83 6.13
185 186 1.136147 CAGCAGAACAGCAATCGCC 59.864 57.895 0.00 0.00 39.83 5.54
186 187 1.513586 GCAGCAGAACAGCAATCGC 60.514 57.895 0.00 0.00 36.85 4.58
187 188 1.225936 CGCAGCAGAACAGCAATCG 60.226 57.895 0.00 0.00 36.85 3.34
188 189 0.239347 AACGCAGCAGAACAGCAATC 59.761 50.000 0.00 0.00 36.85 2.67
189 190 0.039798 CAACGCAGCAGAACAGCAAT 60.040 50.000 0.00 0.00 36.85 3.56
190 191 1.356270 CAACGCAGCAGAACAGCAA 59.644 52.632 0.00 0.00 36.85 3.91
191 192 2.545596 CCAACGCAGCAGAACAGCA 61.546 57.895 0.00 0.00 36.85 4.41
192 193 2.063541 AACCAACGCAGCAGAACAGC 62.064 55.000 0.00 0.00 0.00 4.40
193 194 0.381801 AAACCAACGCAGCAGAACAG 59.618 50.000 0.00 0.00 0.00 3.16
194 195 0.814457 AAAACCAACGCAGCAGAACA 59.186 45.000 0.00 0.00 0.00 3.18
195 196 2.766970 TAAAACCAACGCAGCAGAAC 57.233 45.000 0.00 0.00 0.00 3.01
196 197 2.030363 CCATAAAACCAACGCAGCAGAA 60.030 45.455 0.00 0.00 0.00 3.02
197 198 1.539388 CCATAAAACCAACGCAGCAGA 59.461 47.619 0.00 0.00 0.00 4.26
198 199 1.402720 CCCATAAAACCAACGCAGCAG 60.403 52.381 0.00 0.00 0.00 4.24
199 200 0.600557 CCCATAAAACCAACGCAGCA 59.399 50.000 0.00 0.00 0.00 4.41
200 201 0.108851 CCCCATAAAACCAACGCAGC 60.109 55.000 0.00 0.00 0.00 5.25
201 202 0.108851 GCCCCATAAAACCAACGCAG 60.109 55.000 0.00 0.00 0.00 5.18
202 203 1.536943 GGCCCCATAAAACCAACGCA 61.537 55.000 0.00 0.00 0.00 5.24
203 204 1.216977 GGCCCCATAAAACCAACGC 59.783 57.895 0.00 0.00 0.00 4.84
204 205 1.262417 AAGGCCCCATAAAACCAACG 58.738 50.000 0.00 0.00 0.00 4.10
205 206 2.167693 GCTAAGGCCCCATAAAACCAAC 59.832 50.000 0.00 0.00 0.00 3.77
206 207 2.225394 TGCTAAGGCCCCATAAAACCAA 60.225 45.455 0.00 0.00 37.74 3.67
207 208 1.359474 TGCTAAGGCCCCATAAAACCA 59.641 47.619 0.00 0.00 37.74 3.67
208 209 1.754803 GTGCTAAGGCCCCATAAAACC 59.245 52.381 0.00 0.00 37.74 3.27
209 210 1.404035 CGTGCTAAGGCCCCATAAAAC 59.596 52.381 0.00 0.00 37.74 2.43
210 211 1.282447 TCGTGCTAAGGCCCCATAAAA 59.718 47.619 0.00 0.00 37.74 1.52
211 212 0.913205 TCGTGCTAAGGCCCCATAAA 59.087 50.000 0.00 0.00 37.74 1.40
212 213 0.179468 GTCGTGCTAAGGCCCCATAA 59.821 55.000 0.00 0.00 37.74 1.90
213 214 1.827394 GTCGTGCTAAGGCCCCATA 59.173 57.895 0.00 0.00 37.74 2.74
214 215 2.590092 GTCGTGCTAAGGCCCCAT 59.410 61.111 0.00 0.00 37.74 4.00
215 216 4.077184 CGTCGTGCTAAGGCCCCA 62.077 66.667 0.00 0.00 37.74 4.96
216 217 3.766691 TCGTCGTGCTAAGGCCCC 61.767 66.667 0.00 0.00 37.74 5.80
217 218 2.502692 AAGTCGTCGTGCTAAGGCCC 62.503 60.000 0.00 0.00 37.74 5.80
218 219 1.077089 GAAGTCGTCGTGCTAAGGCC 61.077 60.000 0.00 0.00 37.74 5.19
219 220 1.077089 GGAAGTCGTCGTGCTAAGGC 61.077 60.000 0.00 0.00 39.26 4.35
220 221 0.526662 AGGAAGTCGTCGTGCTAAGG 59.473 55.000 0.00 0.00 0.00 2.69
221 222 1.199327 TCAGGAAGTCGTCGTGCTAAG 59.801 52.381 3.89 0.00 41.11 2.18
222 223 1.068748 GTCAGGAAGTCGTCGTGCTAA 60.069 52.381 3.89 0.00 41.11 3.09
223 224 0.520404 GTCAGGAAGTCGTCGTGCTA 59.480 55.000 3.89 0.00 41.11 3.49
224 225 1.173444 AGTCAGGAAGTCGTCGTGCT 61.173 55.000 3.89 2.68 41.11 4.40
225 226 1.004277 CAGTCAGGAAGTCGTCGTGC 61.004 60.000 3.89 0.70 41.11 5.34
226 227 0.311165 ACAGTCAGGAAGTCGTCGTG 59.689 55.000 2.49 2.49 42.41 4.35
227 228 0.592148 GACAGTCAGGAAGTCGTCGT 59.408 55.000 0.00 0.00 0.00 4.34
228 229 0.875728 AGACAGTCAGGAAGTCGTCG 59.124 55.000 2.66 0.00 37.36 5.12
229 230 4.705337 AATAGACAGTCAGGAAGTCGTC 57.295 45.455 2.66 0.00 37.36 4.20
230 231 5.008331 TGTAATAGACAGTCAGGAAGTCGT 58.992 41.667 2.66 0.00 37.36 4.34
231 232 5.562506 TGTAATAGACAGTCAGGAAGTCG 57.437 43.478 2.66 0.00 37.36 4.18
232 233 6.688578 TGTTGTAATAGACAGTCAGGAAGTC 58.311 40.000 2.66 0.00 39.88 3.01
233 234 6.665992 TGTTGTAATAGACAGTCAGGAAGT 57.334 37.500 2.66 0.00 39.88 3.01
234 235 7.155328 ACTTGTTGTAATAGACAGTCAGGAAG 58.845 38.462 2.66 0.00 39.88 3.46
235 236 7.062749 ACTTGTTGTAATAGACAGTCAGGAA 57.937 36.000 2.66 0.00 39.88 3.36
236 237 6.665992 ACTTGTTGTAATAGACAGTCAGGA 57.334 37.500 2.66 0.00 39.88 3.86
237 238 7.730364 AAACTTGTTGTAATAGACAGTCAGG 57.270 36.000 2.66 0.00 39.88 3.86
238 239 8.612619 ACAAAACTTGTTGTAATAGACAGTCAG 58.387 33.333 2.66 0.00 42.22 3.51
239 240 8.500753 ACAAAACTTGTTGTAATAGACAGTCA 57.499 30.769 2.66 0.00 42.22 3.41
240 241 8.609176 TGACAAAACTTGTTGTAATAGACAGTC 58.391 33.333 0.00 0.00 45.52 3.51
241 242 8.500753 TGACAAAACTTGTTGTAATAGACAGT 57.499 30.769 0.00 0.00 45.52 3.55
242 243 8.070171 CCTGACAAAACTTGTTGTAATAGACAG 58.930 37.037 0.00 0.00 45.52 3.51
243 244 7.468084 GCCTGACAAAACTTGTTGTAATAGACA 60.468 37.037 0.00 0.00 45.52 3.41
244 245 6.856426 GCCTGACAAAACTTGTTGTAATAGAC 59.144 38.462 0.00 0.00 45.52 2.59
245 246 6.770785 AGCCTGACAAAACTTGTTGTAATAGA 59.229 34.615 0.00 0.00 45.52 1.98
246 247 6.970484 AGCCTGACAAAACTTGTTGTAATAG 58.030 36.000 0.00 0.00 45.52 1.73
247 248 6.016610 GGAGCCTGACAAAACTTGTTGTAATA 60.017 38.462 0.00 0.00 45.52 0.98
248 249 5.221244 GGAGCCTGACAAAACTTGTTGTAAT 60.221 40.000 0.00 0.00 45.52 1.89
249 250 4.097286 GGAGCCTGACAAAACTTGTTGTAA 59.903 41.667 0.00 0.00 45.52 2.41
250 251 3.630312 GGAGCCTGACAAAACTTGTTGTA 59.370 43.478 0.00 0.00 45.52 2.41
251 252 2.427095 GGAGCCTGACAAAACTTGTTGT 59.573 45.455 0.00 0.00 45.52 3.32
252 253 2.541588 CGGAGCCTGACAAAACTTGTTG 60.542 50.000 0.00 0.00 45.52 3.33
253 254 1.676006 CGGAGCCTGACAAAACTTGTT 59.324 47.619 0.00 0.00 45.52 2.83
255 256 0.593128 CCGGAGCCTGACAAAACTTG 59.407 55.000 0.00 0.00 0.00 3.16
256 257 0.182775 ACCGGAGCCTGACAAAACTT 59.817 50.000 9.46 0.00 0.00 2.66
257 258 0.250338 GACCGGAGCCTGACAAAACT 60.250 55.000 9.46 0.00 0.00 2.66
258 259 0.534203 TGACCGGAGCCTGACAAAAC 60.534 55.000 9.46 0.00 0.00 2.43
259 260 0.250295 CTGACCGGAGCCTGACAAAA 60.250 55.000 9.46 0.00 0.00 2.44
260 261 1.371183 CTGACCGGAGCCTGACAAA 59.629 57.895 9.46 0.00 0.00 2.83
261 262 2.583441 CCTGACCGGAGCCTGACAA 61.583 63.158 9.46 0.00 33.16 3.18
262 263 2.997315 CCTGACCGGAGCCTGACA 60.997 66.667 9.46 0.00 33.16 3.58
263 264 2.232298 CTTCCTGACCGGAGCCTGAC 62.232 65.000 9.46 0.00 44.28 3.51
264 265 1.984570 CTTCCTGACCGGAGCCTGA 60.985 63.158 9.46 0.00 44.28 3.86
265 266 2.581354 CTTCCTGACCGGAGCCTG 59.419 66.667 9.46 0.59 44.28 4.85
266 267 2.685380 CCTTCCTGACCGGAGCCT 60.685 66.667 9.46 0.00 44.28 4.58
267 268 3.787001 CCCTTCCTGACCGGAGCC 61.787 72.222 9.46 0.00 44.28 4.70
268 269 2.683933 TCCCTTCCTGACCGGAGC 60.684 66.667 9.46 0.00 44.28 4.70
269 270 0.614979 TTCTCCCTTCCTGACCGGAG 60.615 60.000 9.46 0.00 44.28 4.63
270 271 0.042731 ATTCTCCCTTCCTGACCGGA 59.957 55.000 9.46 0.00 41.06 5.14
271 272 1.789523 TATTCTCCCTTCCTGACCGG 58.210 55.000 0.00 0.00 0.00 5.28
272 273 2.481449 CGTTATTCTCCCTTCCTGACCG 60.481 54.545 0.00 0.00 0.00 4.79
273 274 2.764572 TCGTTATTCTCCCTTCCTGACC 59.235 50.000 0.00 0.00 0.00 4.02
274 275 3.734293 CGTCGTTATTCTCCCTTCCTGAC 60.734 52.174 0.00 0.00 0.00 3.51
275 276 2.426024 CGTCGTTATTCTCCCTTCCTGA 59.574 50.000 0.00 0.00 0.00 3.86
276 277 2.481449 CCGTCGTTATTCTCCCTTCCTG 60.481 54.545 0.00 0.00 0.00 3.86
277 278 1.755380 CCGTCGTTATTCTCCCTTCCT 59.245 52.381 0.00 0.00 0.00 3.36
278 279 1.805495 GCCGTCGTTATTCTCCCTTCC 60.805 57.143 0.00 0.00 0.00 3.46
279 280 1.568606 GCCGTCGTTATTCTCCCTTC 58.431 55.000 0.00 0.00 0.00 3.46
280 281 0.179119 CGCCGTCGTTATTCTCCCTT 60.179 55.000 0.00 0.00 0.00 3.95
281 282 1.436336 CGCCGTCGTTATTCTCCCT 59.564 57.895 0.00 0.00 0.00 4.20
282 283 2.235699 GCGCCGTCGTTATTCTCCC 61.236 63.158 0.00 0.00 38.14 4.30
283 284 2.574222 CGCGCCGTCGTTATTCTCC 61.574 63.158 0.00 0.00 38.14 3.71
284 285 2.911280 CGCGCCGTCGTTATTCTC 59.089 61.111 0.00 0.00 38.14 2.87
285 286 3.252484 GCGCGCCGTCGTTATTCT 61.252 61.111 23.24 0.00 38.14 2.40
286 287 4.275344 GGCGCGCCGTCGTTATTC 62.275 66.667 37.24 7.78 38.14 1.75
287 288 4.807039 AGGCGCGCCGTCGTTATT 62.807 61.111 41.70 21.60 41.95 1.40
288 289 4.807039 AAGGCGCGCCGTCGTTAT 62.807 61.111 41.70 22.42 41.95 1.89
298 299 0.669318 TAAAGTGAGGTGAAGGCGCG 60.669 55.000 0.00 0.00 0.00 6.86
299 300 1.079503 CTAAAGTGAGGTGAAGGCGC 58.920 55.000 0.00 0.00 0.00 6.53
300 301 2.457366 ACTAAAGTGAGGTGAAGGCG 57.543 50.000 0.00 0.00 0.00 5.52
301 302 4.538746 AGTACTAAAGTGAGGTGAAGGC 57.461 45.455 0.00 0.00 0.00 4.35
302 303 5.855045 ACAAGTACTAAAGTGAGGTGAAGG 58.145 41.667 0.00 0.00 0.00 3.46
303 304 7.659186 ACTACAAGTACTAAAGTGAGGTGAAG 58.341 38.462 0.00 0.00 0.00 3.02
304 305 7.521099 CGACTACAAGTACTAAAGTGAGGTGAA 60.521 40.741 8.87 0.00 0.00 3.18
305 306 6.072838 CGACTACAAGTACTAAAGTGAGGTGA 60.073 42.308 8.87 0.00 0.00 4.02
306 307 6.084925 CGACTACAAGTACTAAAGTGAGGTG 58.915 44.000 8.87 0.00 0.00 4.00
307 308 5.767168 ACGACTACAAGTACTAAAGTGAGGT 59.233 40.000 8.87 3.17 0.00 3.85
308 309 6.251655 ACGACTACAAGTACTAAAGTGAGG 57.748 41.667 8.87 2.82 0.00 3.86
309 310 6.014293 CGACGACTACAAGTACTAAAGTGAG 58.986 44.000 8.87 6.23 0.00 3.51
310 311 5.615544 GCGACGACTACAAGTACTAAAGTGA 60.616 44.000 0.00 0.00 0.00 3.41
311 312 4.552660 GCGACGACTACAAGTACTAAAGTG 59.447 45.833 0.00 0.71 0.00 3.16
312 313 4.214119 TGCGACGACTACAAGTACTAAAGT 59.786 41.667 0.00 0.00 0.00 2.66
313 314 4.715896 TGCGACGACTACAAGTACTAAAG 58.284 43.478 0.00 0.00 0.00 1.85
314 315 4.747540 TGCGACGACTACAAGTACTAAA 57.252 40.909 0.00 0.00 0.00 1.85
315 316 4.024133 TGTTGCGACGACTACAAGTACTAA 60.024 41.667 0.00 0.00 0.00 2.24
316 317 3.498018 TGTTGCGACGACTACAAGTACTA 59.502 43.478 0.00 0.00 0.00 1.82
317 318 2.291465 TGTTGCGACGACTACAAGTACT 59.709 45.455 0.00 0.00 0.00 2.73
318 319 2.653890 TGTTGCGACGACTACAAGTAC 58.346 47.619 0.00 0.00 0.00 2.73
319 320 3.239254 CATGTTGCGACGACTACAAGTA 58.761 45.455 0.00 0.00 0.00 2.24
320 321 2.058798 CATGTTGCGACGACTACAAGT 58.941 47.619 0.00 0.00 0.00 3.16
321 322 1.390123 CCATGTTGCGACGACTACAAG 59.610 52.381 0.00 1.00 0.00 3.16
322 323 1.269883 ACCATGTTGCGACGACTACAA 60.270 47.619 0.00 0.00 0.00 2.41
323 324 0.315886 ACCATGTTGCGACGACTACA 59.684 50.000 0.00 4.06 0.00 2.74
324 325 0.989890 GACCATGTTGCGACGACTAC 59.010 55.000 0.00 0.00 0.00 2.73
325 326 0.885879 AGACCATGTTGCGACGACTA 59.114 50.000 0.00 0.00 0.00 2.59
326 327 0.885879 TAGACCATGTTGCGACGACT 59.114 50.000 0.00 0.00 0.00 4.18
327 328 0.989890 GTAGACCATGTTGCGACGAC 59.010 55.000 0.00 0.00 0.00 4.34
328 329 0.455464 CGTAGACCATGTTGCGACGA 60.455 55.000 0.00 0.00 0.00 4.20
329 330 1.410737 CCGTAGACCATGTTGCGACG 61.411 60.000 0.00 0.00 0.00 5.12
330 331 0.108992 TCCGTAGACCATGTTGCGAC 60.109 55.000 0.00 0.00 0.00 5.19
331 332 0.821517 ATCCGTAGACCATGTTGCGA 59.178 50.000 0.00 0.00 0.00 5.10
332 333 1.202417 AGATCCGTAGACCATGTTGCG 60.202 52.381 0.00 0.00 0.00 4.85
333 334 2.159099 TCAGATCCGTAGACCATGTTGC 60.159 50.000 0.00 0.00 0.00 4.17
334 335 3.801114 TCAGATCCGTAGACCATGTTG 57.199 47.619 0.00 0.00 0.00 3.33
335 336 4.162320 ACATTCAGATCCGTAGACCATGTT 59.838 41.667 0.00 0.00 0.00 2.71
336 337 3.706594 ACATTCAGATCCGTAGACCATGT 59.293 43.478 0.00 0.00 0.00 3.21
337 338 4.327982 ACATTCAGATCCGTAGACCATG 57.672 45.455 0.00 0.00 0.00 3.66
338 339 6.672266 ATTACATTCAGATCCGTAGACCAT 57.328 37.500 0.00 0.00 0.00 3.55
339 340 6.479972 AATTACATTCAGATCCGTAGACCA 57.520 37.500 0.00 0.00 0.00 4.02
340 341 7.787725 AAAATTACATTCAGATCCGTAGACC 57.212 36.000 0.00 0.00 0.00 3.85
363 364 8.885722 GGTACAACGGACATCAGAAATAATAAA 58.114 33.333 0.00 0.00 0.00 1.40
364 365 7.223193 CGGTACAACGGACATCAGAAATAATAA 59.777 37.037 0.00 0.00 0.00 1.40
365 366 6.698329 CGGTACAACGGACATCAGAAATAATA 59.302 38.462 0.00 0.00 0.00 0.98
366 367 5.522460 CGGTACAACGGACATCAGAAATAAT 59.478 40.000 0.00 0.00 0.00 1.28
367 368 4.865925 CGGTACAACGGACATCAGAAATAA 59.134 41.667 0.00 0.00 0.00 1.40
368 369 4.082081 ACGGTACAACGGACATCAGAAATA 60.082 41.667 0.00 0.00 38.39 1.40
369 370 3.259064 CGGTACAACGGACATCAGAAAT 58.741 45.455 0.00 0.00 0.00 2.17
370 371 2.036217 ACGGTACAACGGACATCAGAAA 59.964 45.455 0.00 0.00 38.39 2.52
371 372 1.614903 ACGGTACAACGGACATCAGAA 59.385 47.619 0.00 0.00 38.39 3.02
372 373 1.200716 GACGGTACAACGGACATCAGA 59.799 52.381 0.00 0.00 38.39 3.27
373 374 1.068125 TGACGGTACAACGGACATCAG 60.068 52.381 0.00 0.00 38.39 2.90
374 375 0.960286 TGACGGTACAACGGACATCA 59.040 50.000 0.00 0.00 38.39 3.07
375 376 1.924524 CATGACGGTACAACGGACATC 59.075 52.381 0.00 0.00 38.39 3.06
376 377 1.546923 TCATGACGGTACAACGGACAT 59.453 47.619 0.00 0.00 38.39 3.06
377 378 0.960286 TCATGACGGTACAACGGACA 59.040 50.000 0.00 0.00 38.39 4.02
378 379 2.288961 ATCATGACGGTACAACGGAC 57.711 50.000 0.00 0.00 38.39 4.79
379 380 2.231721 TCAATCATGACGGTACAACGGA 59.768 45.455 0.00 0.00 38.39 4.69
380 381 2.612604 TCAATCATGACGGTACAACGG 58.387 47.619 0.00 0.00 38.39 4.44
381 382 3.924073 TCTTCAATCATGACGGTACAACG 59.076 43.478 0.00 0.00 34.61 4.10
382 383 4.201589 CGTCTTCAATCATGACGGTACAAC 60.202 45.833 0.00 0.00 44.88 3.32
383 384 3.924073 CGTCTTCAATCATGACGGTACAA 59.076 43.478 0.00 0.00 44.88 2.41
384 385 3.507786 CGTCTTCAATCATGACGGTACA 58.492 45.455 0.00 0.00 44.88 2.90
390 391 7.936950 TGATCTATTCGTCTTCAATCATGAC 57.063 36.000 0.00 0.00 34.61 3.06
391 392 8.947055 TTTGATCTATTCGTCTTCAATCATGA 57.053 30.769 0.00 0.00 0.00 3.07
392 393 9.647679 CTTTTGATCTATTCGTCTTCAATCATG 57.352 33.333 0.00 0.00 0.00 3.07
393 394 9.388506 ACTTTTGATCTATTCGTCTTCAATCAT 57.611 29.630 0.00 0.00 0.00 2.45
394 395 8.777865 ACTTTTGATCTATTCGTCTTCAATCA 57.222 30.769 0.00 0.00 0.00 2.57
398 399 9.878599 GAAAAACTTTTGATCTATTCGTCTTCA 57.121 29.630 0.00 0.00 0.00 3.02
399 400 9.041587 CGAAAAACTTTTGATCTATTCGTCTTC 57.958 33.333 0.00 0.00 35.13 2.87
400 401 8.015658 CCGAAAAACTTTTGATCTATTCGTCTT 58.984 33.333 0.00 0.00 37.35 3.01
401 402 7.386848 TCCGAAAAACTTTTGATCTATTCGTCT 59.613 33.333 0.00 0.00 37.35 4.18
402 403 7.515643 TCCGAAAAACTTTTGATCTATTCGTC 58.484 34.615 0.00 0.00 37.35 4.20
403 404 7.429636 TCCGAAAAACTTTTGATCTATTCGT 57.570 32.000 0.00 0.00 37.35 3.85
404 405 8.722342 TTTCCGAAAAACTTTTGATCTATTCG 57.278 30.769 0.00 0.00 38.41 3.34
420 421 8.785946 CCCTACAACTACTAATTTTTCCGAAAA 58.214 33.333 2.01 2.01 38.96 2.29
421 422 8.156165 TCCCTACAACTACTAATTTTTCCGAAA 58.844 33.333 0.00 0.00 0.00 3.46
422 423 7.678837 TCCCTACAACTACTAATTTTTCCGAA 58.321 34.615 0.00 0.00 0.00 4.30
423 424 7.243604 TCCCTACAACTACTAATTTTTCCGA 57.756 36.000 0.00 0.00 0.00 4.55
424 425 7.551617 ACATCCCTACAACTACTAATTTTTCCG 59.448 37.037 0.00 0.00 0.00 4.30
425 426 8.803397 ACATCCCTACAACTACTAATTTTTCC 57.197 34.615 0.00 0.00 0.00 3.13
429 430 8.520351 GCAAAACATCCCTACAACTACTAATTT 58.480 33.333 0.00 0.00 0.00 1.82
430 431 7.888546 AGCAAAACATCCCTACAACTACTAATT 59.111 33.333 0.00 0.00 0.00 1.40
431 432 7.336931 CAGCAAAACATCCCTACAACTACTAAT 59.663 37.037 0.00 0.00 0.00 1.73
432 433 6.653320 CAGCAAAACATCCCTACAACTACTAA 59.347 38.462 0.00 0.00 0.00 2.24
433 434 6.170506 CAGCAAAACATCCCTACAACTACTA 58.829 40.000 0.00 0.00 0.00 1.82
525 526 9.587772 TTTTAGATGTCTAAGAACATGACTAGC 57.412 33.333 0.00 0.00 39.93 3.42
555 562 5.736951 AATCATCTCTACTCCTACATGCC 57.263 43.478 0.00 0.00 0.00 4.40
605 625 8.160976 GTCAGACATAAAGTAGCGAAGTTTAAC 58.839 37.037 0.00 0.00 36.73 2.01
616 636 3.517901 TGGTGGGGTCAGACATAAAGTAG 59.482 47.826 2.17 0.00 0.00 2.57
620 640 1.353022 GGTGGTGGGGTCAGACATAAA 59.647 52.381 2.17 0.00 0.00 1.40
643 663 0.380733 GGCGTTGGCTTTATACTGGC 59.619 55.000 0.00 0.00 39.81 4.85
719 739 1.745864 TCTCCTCGTCTCGTGCTCC 60.746 63.158 0.00 0.00 0.00 4.70
919 944 0.959372 GTCGTCGAAGGAGGAGGACA 60.959 60.000 0.00 0.00 44.48 4.02
926 951 4.831307 CCGCCGTCGTCGAAGGAG 62.831 72.222 28.27 24.40 39.71 3.69
945 970 3.823330 CGTAGCTTCCGGTCGCCT 61.823 66.667 12.84 3.58 0.00 5.52
947 972 2.578981 GTCGTAGCTTCCGGTCGC 60.579 66.667 0.00 5.37 0.00 5.19
1055 1089 4.767255 CGCCGGCCTTGCTCTTCT 62.767 66.667 23.46 0.00 0.00 2.85
1292 1332 0.107606 CTCCTCGAAGTCCTCCTCGA 60.108 60.000 0.00 0.00 0.00 4.04
1344 1384 3.256960 TTCCCCTTGCCGCTTCCT 61.257 61.111 0.00 0.00 0.00 3.36
1347 1387 1.603739 GTTCTTCCCCTTGCCGCTT 60.604 57.895 0.00 0.00 0.00 4.68
1458 1499 0.587242 GTCATTCTACGTACGCGCGA 60.587 55.000 39.36 17.83 42.83 5.87
1520 1561 6.943981 TCTGTACAATCAAGAAACAAACGAG 58.056 36.000 0.00 0.00 0.00 4.18
1521 1562 6.537301 ACTCTGTACAATCAAGAAACAAACGA 59.463 34.615 0.00 0.00 0.00 3.85
1528 1569 6.494842 GTTTGCACTCTGTACAATCAAGAAA 58.505 36.000 0.00 0.00 0.00 2.52
1571 1612 1.863454 CCATGCACGAAGCTAAGCTAG 59.137 52.381 0.00 0.00 45.94 3.42
1592 1633 1.059122 CCAACGATGACGATCAACACG 59.941 52.381 0.00 0.00 42.66 4.49
1627 1668 3.409026 AGGCGGATGATATGAACTTCC 57.591 47.619 0.00 0.00 0.00 3.46
1643 1684 3.701241 TCAGCAGTAAAAACAAAAGGCG 58.299 40.909 0.00 0.00 0.00 5.52
1644 1685 6.421405 CAATTCAGCAGTAAAAACAAAAGGC 58.579 36.000 0.00 0.00 0.00 4.35
1650 1691 4.803088 GTGTGCAATTCAGCAGTAAAAACA 59.197 37.500 0.00 0.00 46.69 2.83
1665 1706 0.887387 GTACCGTGGGTGTGTGCAAT 60.887 55.000 0.00 0.00 36.19 3.56
1676 1717 2.476185 CGTACTAAAGACCGTACCGTGG 60.476 54.545 0.00 0.00 34.05 4.94
1691 1740 4.082841 TGTTACTTTGCGACATCCGTACTA 60.083 41.667 0.00 0.00 41.15 1.82
1700 1749 6.908820 CGAGTACTATATGTTACTTTGCGACA 59.091 38.462 0.00 0.00 0.00 4.35
1726 1778 5.767168 CCTGTCATTCCAAAGAGAAACTTCT 59.233 40.000 0.00 0.00 41.00 2.85
1734 1786 5.008613 TCGTTTTTCCTGTCATTCCAAAGAG 59.991 40.000 0.00 0.00 0.00 2.85
1834 1901 4.998671 TGGAAACACATTGAAGCTGAAA 57.001 36.364 0.00 0.00 33.40 2.69
1849 1916 6.258507 ACAAGAAATTTCATGCTTGTGGAAAC 59.741 34.615 20.33 0.00 46.41 2.78
2005 2072 9.403583 AGTAGTTTCTATTCTTCCACACAAAAA 57.596 29.630 0.00 0.00 0.00 1.94
2006 2073 8.836413 CAGTAGTTTCTATTCTTCCACACAAAA 58.164 33.333 0.00 0.00 0.00 2.44
2007 2074 7.041372 GCAGTAGTTTCTATTCTTCCACACAAA 60.041 37.037 0.00 0.00 0.00 2.83
2008 2075 6.426937 GCAGTAGTTTCTATTCTTCCACACAA 59.573 38.462 0.00 0.00 0.00 3.33
2009 2076 5.932303 GCAGTAGTTTCTATTCTTCCACACA 59.068 40.000 0.00 0.00 0.00 3.72
2010 2077 5.062308 CGCAGTAGTTTCTATTCTTCCACAC 59.938 44.000 0.00 0.00 0.00 3.82
2011 2078 5.168569 CGCAGTAGTTTCTATTCTTCCACA 58.831 41.667 0.00 0.00 0.00 4.17
2012 2079 4.033014 GCGCAGTAGTTTCTATTCTTCCAC 59.967 45.833 0.30 0.00 0.00 4.02
2013 2080 4.181578 GCGCAGTAGTTTCTATTCTTCCA 58.818 43.478 0.30 0.00 0.00 3.53
2014 2081 4.033014 GTGCGCAGTAGTTTCTATTCTTCC 59.967 45.833 12.22 0.00 0.00 3.46
2015 2082 4.625742 TGTGCGCAGTAGTTTCTATTCTTC 59.374 41.667 12.22 0.00 0.00 2.87
2016 2083 4.566004 TGTGCGCAGTAGTTTCTATTCTT 58.434 39.130 12.22 0.00 0.00 2.52
2017 2084 4.188247 TGTGCGCAGTAGTTTCTATTCT 57.812 40.909 12.22 0.00 0.00 2.40
2018 2085 4.566759 TCATGTGCGCAGTAGTTTCTATTC 59.433 41.667 12.22 0.00 0.00 1.75
2019 2086 4.503910 TCATGTGCGCAGTAGTTTCTATT 58.496 39.130 12.22 0.00 0.00 1.73
2020 2087 4.123497 TCATGTGCGCAGTAGTTTCTAT 57.877 40.909 12.22 0.00 0.00 1.98
2021 2088 3.586100 TCATGTGCGCAGTAGTTTCTA 57.414 42.857 12.22 0.00 0.00 2.10
2022 2089 2.455674 TCATGTGCGCAGTAGTTTCT 57.544 45.000 12.22 0.00 0.00 2.52
2023 2090 2.672874 TCATCATGTGCGCAGTAGTTTC 59.327 45.455 12.22 0.00 0.00 2.78
2024 2091 2.698803 TCATCATGTGCGCAGTAGTTT 58.301 42.857 12.22 0.00 0.00 2.66
2025 2092 2.385013 TCATCATGTGCGCAGTAGTT 57.615 45.000 12.22 0.00 0.00 2.24
2026 2093 2.609427 ATCATCATGTGCGCAGTAGT 57.391 45.000 12.22 0.00 0.00 2.73
2027 2094 2.222678 GGAATCATCATGTGCGCAGTAG 59.777 50.000 12.22 2.89 0.00 2.57
2028 2095 2.158914 AGGAATCATCATGTGCGCAGTA 60.159 45.455 12.22 2.74 0.00 2.74
2029 2096 1.019673 GGAATCATCATGTGCGCAGT 58.980 50.000 12.22 0.00 0.00 4.40
2030 2097 1.306148 AGGAATCATCATGTGCGCAG 58.694 50.000 12.22 0.00 0.00 5.18
2031 2098 1.402613 CAAGGAATCATCATGTGCGCA 59.597 47.619 5.66 5.66 0.00 6.09
2032 2099 1.402968 ACAAGGAATCATCATGTGCGC 59.597 47.619 0.00 0.00 0.00 6.09
2033 2100 3.622612 TGTACAAGGAATCATCATGTGCG 59.377 43.478 0.00 0.00 34.52 5.34
2034 2101 5.565592 TTGTACAAGGAATCATCATGTGC 57.434 39.130 3.59 0.00 33.34 4.57
2035 2102 7.703621 GGATTTTGTACAAGGAATCATCATGTG 59.296 37.037 24.31 0.00 31.85 3.21
2036 2103 7.415541 CGGATTTTGTACAAGGAATCATCATGT 60.416 37.037 24.31 0.00 33.41 3.21
2099 2166 2.359792 CGAATCGTCGGTGAGTTGG 58.640 57.895 0.00 0.00 43.81 3.77
2132 2199 4.506654 CGATATTTCTCGGACGGATTTTGT 59.493 41.667 0.00 0.00 35.03 2.83
2139 2206 1.662309 CGGACGATATTTCTCGGACGG 60.662 57.143 0.00 0.00 42.88 4.79
2141 2208 2.770699 ACGGACGATATTTCTCGGAC 57.229 50.000 0.00 0.00 42.88 4.79
2155 2222 3.917329 TGAGCAGTGCTATATACGGAC 57.083 47.619 19.77 2.39 39.88 4.79
2160 2227 8.303876 TGAATTCGTATTGAGCAGTGCTATATA 58.696 33.333 19.77 15.17 39.88 0.86
2161 2228 7.154656 TGAATTCGTATTGAGCAGTGCTATAT 58.845 34.615 19.77 16.19 39.88 0.86
2166 2233 4.034394 TCATGAATTCGTATTGAGCAGTGC 59.966 41.667 7.13 7.13 0.00 4.40
2198 2265 6.102006 TCATGAATTTGACCGTCGAAATAC 57.898 37.500 5.28 1.76 0.00 1.89
2262 2329 8.262227 TCATATTGTGTTAGTATTCCCTTCGTT 58.738 33.333 0.00 0.00 0.00 3.85
2288 2355 9.521841 TTCATAAGTATCTTGTAGATCGGAGAT 57.478 33.333 0.00 7.82 45.12 2.75


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.