Multiple sequence alignment - TraesCS7B01G316700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G316700 chr7B 100.000 5352 0 0 1 5352 566473652 566479003 0.000000e+00 9884.0
1 TraesCS7B01G316700 chr7A 91.944 3873 250 20 961 4792 608667870 608671721 0.000000e+00 5367.0
2 TraesCS7B01G316700 chr7A 90.415 386 19 9 460 837 608667471 608667846 4.820000e-135 492.0
3 TraesCS7B01G316700 chr7A 92.520 254 19 0 5037 5290 608671802 608672055 1.100000e-96 364.0
4 TraesCS7B01G316700 chr7A 97.297 37 0 1 4790 4826 608671767 608671802 1.610000e-05 62.1
5 TraesCS7B01G316700 chr7D 92.348 2849 179 16 1847 4687 528892814 528895631 0.000000e+00 4017.0
6 TraesCS7B01G316700 chr7D 88.599 842 78 7 961 1788 528891982 528892819 0.000000e+00 1007.0
7 TraesCS7B01G316700 chr7D 91.773 547 30 6 4790 5334 528901101 528901634 0.000000e+00 747.0
8 TraesCS7B01G316700 chr7D 88.361 421 21 14 408 819 528891533 528891934 1.040000e-131 481.0
9 TraesCS7B01G316700 chr7D 91.195 159 14 0 35 193 611867464 611867622 3.250000e-52 217.0
10 TraesCS7B01G316700 chr7D 89.103 156 17 0 35 190 515498140 515498295 1.520000e-45 195.0
11 TraesCS7B01G316700 chr7D 88.000 150 9 7 4653 4794 528895662 528895810 9.220000e-38 169.0
12 TraesCS7B01G316700 chr3A 90.850 153 14 0 41 193 568030766 568030614 7.030000e-49 206.0
13 TraesCS7B01G316700 chr3A 95.833 48 2 0 234 281 695751588 695751635 1.600000e-10 78.7
14 TraesCS7B01G316700 chr3B 89.308 159 17 0 35 193 658461137 658461295 3.270000e-47 200.0
15 TraesCS7B01G316700 chr3B 97.561 41 1 0 241 281 762731230 762731190 2.670000e-08 71.3
16 TraesCS7B01G316700 chr1D 89.308 159 17 0 35 193 20652827 20652985 3.270000e-47 200.0
17 TraesCS7B01G316700 chr5D 89.610 154 16 0 40 193 242125745 242125592 4.230000e-46 196.0
18 TraesCS7B01G316700 chr5D 91.228 57 3 2 223 279 319182710 319182764 5.750000e-10 76.8
19 TraesCS7B01G316700 chr5B 90.066 151 14 1 43 193 490419890 490419741 1.520000e-45 195.0
20 TraesCS7B01G316700 chr2A 89.404 151 15 1 41 190 682973687 682973837 7.080000e-44 189.0
21 TraesCS7B01G316700 chr1B 88.889 153 17 0 41 193 14185925 14186077 7.080000e-44 189.0
22 TraesCS7B01G316700 chr1A 97.674 43 1 0 236 278 553464118 553464076 2.070000e-09 75.0
23 TraesCS7B01G316700 chr4D 95.556 45 2 0 237 281 484809828 484809872 7.440000e-09 73.1
24 TraesCS7B01G316700 chr6A 95.556 45 1 1 241 285 1838704 1838661 2.670000e-08 71.3
25 TraesCS7B01G316700 chr6A 97.561 41 1 0 241 281 580538491 580538531 2.670000e-08 71.3
26 TraesCS7B01G316700 chr3D 95.556 45 1 1 241 285 68836922 68836879 2.670000e-08 71.3
27 TraesCS7B01G316700 chr4B 95.238 42 2 0 1817 1858 654631248 654631289 3.460000e-07 67.6
28 TraesCS7B01G316700 chr4B 95.238 42 2 0 1817 1858 654693997 654694038 3.460000e-07 67.6
29 TraesCS7B01G316700 chr4B 95.238 42 2 0 1817 1858 654748594 654748635 3.460000e-07 67.6
30 TraesCS7B01G316700 chr4B 95.238 42 2 0 1817 1858 654758799 654758840 3.460000e-07 67.6
31 TraesCS7B01G316700 chr4B 97.368 38 1 0 1817 1854 654769140 654769177 1.240000e-06 65.8
32 TraesCS7B01G316700 chr5A 90.196 51 3 2 235 285 426746471 426746423 1.240000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G316700 chr7B 566473652 566479003 5351 False 9884.000 9884 100.000 1 5352 1 chr7B.!!$F1 5351
1 TraesCS7B01G316700 chr7A 608667471 608672055 4584 False 1571.275 5367 93.044 460 5290 4 chr7A.!!$F1 4830
2 TraesCS7B01G316700 chr7D 528891533 528895810 4277 False 1418.500 4017 89.327 408 4794 4 chr7D.!!$F4 4386
3 TraesCS7B01G316700 chr7D 528901101 528901634 533 False 747.000 747 91.773 4790 5334 1 chr7D.!!$F2 544

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
305 306 0.034863 GATTGGTTAGGTCCCGCCAA 60.035 55.0 10.62 10.62 43.95 4.52 F
860 891 0.105593 CACATGTCATCCCCTCCTCG 59.894 60.0 0.00 0.00 0.00 4.63 F
1650 1706 0.178992 TGGTGGCACTTTTGAGGGAG 60.179 55.0 18.45 0.00 0.00 4.30 F
3197 3272 0.933047 GCAAAACAAAGTCCGCCGAC 60.933 55.0 0.00 0.00 39.50 4.79 F
3607 3682 0.251033 TGCAAGTGCTCAGAGGCATT 60.251 50.0 4.69 0.00 44.34 3.56 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1504 1560 0.324943 ACGATGGAAACCACCTCCAG 59.675 55.0 0.00 0.0 46.04 3.86 R
2692 2767 0.831711 GGGGCAGACCACCACATTTT 60.832 55.0 0.00 0.0 42.91 1.82 R
3297 3372 0.937304 GCGCAAGTGTCTGAACTTCA 59.063 50.0 0.30 0.0 38.34 3.02 R
4075 4150 0.108138 CTCCGCCGATCCAGAAACTT 60.108 55.0 0.00 0.0 0.00 2.66 R
4507 4586 0.391661 CTAACCGTGAGCAGGTGCAT 60.392 55.0 4.48 0.0 41.95 3.96 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 3.205784 CTAGGAGAGGAGCCCAATTTG 57.794 52.381 0.00 0.00 0.00 2.32
27 28 0.627986 AGGAGAGGAGCCCAATTTGG 59.372 55.000 8.56 8.56 37.25 3.28
34 35 3.215245 GCCCAATTTGGCCGCATA 58.785 55.556 9.43 0.00 46.11 3.14
35 36 1.227234 GCCCAATTTGGCCGCATAC 60.227 57.895 9.43 0.00 46.11 2.39
36 37 1.954362 GCCCAATTTGGCCGCATACA 61.954 55.000 9.43 0.00 46.11 2.29
37 38 0.752054 CCCAATTTGGCCGCATACAT 59.248 50.000 10.10 0.00 35.79 2.29
38 39 1.959985 CCCAATTTGGCCGCATACATA 59.040 47.619 10.10 0.00 35.79 2.29
39 40 2.562298 CCCAATTTGGCCGCATACATAT 59.438 45.455 10.10 0.00 35.79 1.78
40 41 3.006752 CCCAATTTGGCCGCATACATATT 59.993 43.478 10.10 0.00 35.79 1.28
41 42 4.219507 CCCAATTTGGCCGCATACATATTA 59.780 41.667 10.10 0.00 35.79 0.98
42 43 5.105392 CCCAATTTGGCCGCATACATATTAT 60.105 40.000 10.10 0.00 35.79 1.28
43 44 6.397272 CCAATTTGGCCGCATACATATTATT 58.603 36.000 1.71 0.00 0.00 1.40
44 45 6.873076 CCAATTTGGCCGCATACATATTATTT 59.127 34.615 1.71 0.00 0.00 1.40
45 46 7.148606 CCAATTTGGCCGCATACATATTATTTG 60.149 37.037 1.71 0.00 0.00 2.32
46 47 4.433186 TGGCCGCATACATATTATTTGC 57.567 40.909 0.00 0.00 0.00 3.68
47 48 4.078537 TGGCCGCATACATATTATTTGCT 58.921 39.130 0.00 0.00 0.00 3.91
48 49 5.249420 TGGCCGCATACATATTATTTGCTA 58.751 37.500 0.00 0.00 0.00 3.49
49 50 5.123186 TGGCCGCATACATATTATTTGCTAC 59.877 40.000 0.00 0.00 0.00 3.58
50 51 5.123186 GGCCGCATACATATTATTTGCTACA 59.877 40.000 0.00 0.00 0.00 2.74
51 52 6.183360 GGCCGCATACATATTATTTGCTACAT 60.183 38.462 0.00 0.00 0.00 2.29
52 53 7.250569 GCCGCATACATATTATTTGCTACATT 58.749 34.615 0.00 0.00 0.00 2.71
53 54 7.754924 GCCGCATACATATTATTTGCTACATTT 59.245 33.333 0.00 0.00 0.00 2.32
54 55 9.064804 CCGCATACATATTATTTGCTACATTTG 57.935 33.333 0.00 0.00 0.00 2.32
55 56 9.064804 CGCATACATATTATTTGCTACATTTGG 57.935 33.333 0.00 0.00 0.00 3.28
59 60 8.532186 ACATATTATTTGCTACATTTGGACCA 57.468 30.769 0.00 0.00 0.00 4.02
60 61 9.146586 ACATATTATTTGCTACATTTGGACCAT 57.853 29.630 0.00 0.00 0.00 3.55
61 62 9.985730 CATATTATTTGCTACATTTGGACCATT 57.014 29.630 0.00 0.00 0.00 3.16
63 64 4.433186 TTTGCTACATTTGGACCATTCG 57.567 40.909 0.00 0.00 0.00 3.34
64 65 2.364632 TGCTACATTTGGACCATTCGG 58.635 47.619 0.00 0.00 38.77 4.30
65 66 1.065551 GCTACATTTGGACCATTCGGC 59.934 52.381 0.00 0.00 34.57 5.54
66 67 1.330521 CTACATTTGGACCATTCGGCG 59.669 52.381 0.00 0.00 34.57 6.46
67 68 0.608035 ACATTTGGACCATTCGGCGT 60.608 50.000 6.85 0.00 34.57 5.68
68 69 0.179166 CATTTGGACCATTCGGCGTG 60.179 55.000 6.85 0.00 34.57 5.34
69 70 0.608035 ATTTGGACCATTCGGCGTGT 60.608 50.000 6.85 0.00 34.57 4.49
70 71 0.820074 TTTGGACCATTCGGCGTGTT 60.820 50.000 6.85 0.00 34.57 3.32
71 72 0.820074 TTGGACCATTCGGCGTGTTT 60.820 50.000 6.85 0.00 34.57 2.83
72 73 0.035036 TGGACCATTCGGCGTGTTTA 59.965 50.000 6.85 0.00 34.57 2.01
73 74 1.158434 GGACCATTCGGCGTGTTTAA 58.842 50.000 6.85 0.00 34.57 1.52
74 75 1.536331 GGACCATTCGGCGTGTTTAAA 59.464 47.619 6.85 0.00 34.57 1.52
75 76 2.162809 GGACCATTCGGCGTGTTTAAAT 59.837 45.455 6.85 0.00 34.57 1.40
76 77 3.366577 GGACCATTCGGCGTGTTTAAATT 60.367 43.478 6.85 0.00 34.57 1.82
77 78 4.231439 GACCATTCGGCGTGTTTAAATTT 58.769 39.130 6.85 0.00 34.57 1.82
78 79 3.984633 ACCATTCGGCGTGTTTAAATTTG 59.015 39.130 6.85 0.00 34.57 2.32
79 80 4.230657 CCATTCGGCGTGTTTAAATTTGA 58.769 39.130 6.85 0.00 0.00 2.69
80 81 4.681942 CCATTCGGCGTGTTTAAATTTGAA 59.318 37.500 6.85 0.00 0.00 2.69
81 82 5.347364 CCATTCGGCGTGTTTAAATTTGAAT 59.653 36.000 6.85 0.00 0.00 2.57
82 83 6.528423 CCATTCGGCGTGTTTAAATTTGAATA 59.472 34.615 6.85 0.00 0.00 1.75
83 84 7.062371 CCATTCGGCGTGTTTAAATTTGAATAA 59.938 33.333 6.85 0.00 0.00 1.40
84 85 8.591312 CATTCGGCGTGTTTAAATTTGAATAAT 58.409 29.630 6.85 0.00 0.00 1.28
85 86 8.522178 TTCGGCGTGTTTAAATTTGAATAATT 57.478 26.923 6.85 0.00 0.00 1.40
86 87 8.522178 TCGGCGTGTTTAAATTTGAATAATTT 57.478 26.923 6.85 0.00 34.55 1.82
87 88 8.428536 TCGGCGTGTTTAAATTTGAATAATTTG 58.571 29.630 6.85 0.00 32.64 2.32
88 89 8.428536 CGGCGTGTTTAAATTTGAATAATTTGA 58.571 29.630 0.00 0.00 32.64 2.69
109 110 9.665719 ATTTGATTTGTAAACTTTGAGTTTGGT 57.334 25.926 14.50 0.00 46.83 3.67
110 111 9.495572 TTTGATTTGTAAACTTTGAGTTTGGTT 57.504 25.926 14.50 0.00 46.83 3.67
111 112 9.495572 TTGATTTGTAAACTTTGAGTTTGGTTT 57.504 25.926 14.50 0.00 46.83 3.27
112 113 8.930760 TGATTTGTAAACTTTGAGTTTGGTTTG 58.069 29.630 14.50 0.00 46.83 2.93
113 114 8.840833 ATTTGTAAACTTTGAGTTTGGTTTGT 57.159 26.923 14.50 0.00 46.83 2.83
114 115 9.930693 ATTTGTAAACTTTGAGTTTGGTTTGTA 57.069 25.926 14.50 0.00 46.83 2.41
115 116 9.760077 TTTGTAAACTTTGAGTTTGGTTTGTAA 57.240 25.926 14.50 0.19 46.83 2.41
116 117 9.760077 TTGTAAACTTTGAGTTTGGTTTGTAAA 57.240 25.926 14.50 0.00 46.83 2.01
117 118 9.194271 TGTAAACTTTGAGTTTGGTTTGTAAAC 57.806 29.630 14.50 0.00 46.83 2.01
118 119 9.414295 GTAAACTTTGAGTTTGGTTTGTAAACT 57.586 29.630 14.50 3.05 46.83 2.66
126 127 9.275398 TGAGTTTGGTTTGTAAACTATATTCGT 57.725 29.630 7.36 0.00 45.52 3.85
127 128 9.537848 GAGTTTGGTTTGTAAACTATATTCGTG 57.462 33.333 7.36 0.00 45.52 4.35
128 129 9.275398 AGTTTGGTTTGTAAACTATATTCGTGA 57.725 29.630 7.36 0.00 44.19 4.35
129 130 9.881529 GTTTGGTTTGTAAACTATATTCGTGAA 57.118 29.630 7.36 0.00 38.89 3.18
133 134 9.006215 GGTTTGTAAACTATATTCGTGAATTGC 57.994 33.333 7.36 0.00 38.89 3.56
134 135 9.769093 GTTTGTAAACTATATTCGTGAATTGCT 57.231 29.630 0.00 0.00 36.03 3.91
136 137 9.767684 TTGTAAACTATATTCGTGAATTGCTTG 57.232 29.630 0.00 0.00 32.50 4.01
137 138 9.157104 TGTAAACTATATTCGTGAATTGCTTGA 57.843 29.630 0.00 0.00 32.50 3.02
138 139 9.982291 GTAAACTATATTCGTGAATTGCTTGAA 57.018 29.630 0.00 0.00 32.50 2.69
139 140 8.895932 AAACTATATTCGTGAATTGCTTGAAC 57.104 30.769 0.00 0.00 32.50 3.18
140 141 7.609760 ACTATATTCGTGAATTGCTTGAACA 57.390 32.000 0.00 0.00 32.50 3.18
141 142 8.213518 ACTATATTCGTGAATTGCTTGAACAT 57.786 30.769 0.00 0.00 32.50 2.71
142 143 8.677300 ACTATATTCGTGAATTGCTTGAACATT 58.323 29.630 0.00 0.00 32.50 2.71
143 144 7.975866 ATATTCGTGAATTGCTTGAACATTC 57.024 32.000 0.00 0.00 32.50 2.67
144 145 4.827304 TCGTGAATTGCTTGAACATTCA 57.173 36.364 0.00 0.00 34.92 2.57
145 146 5.180367 TCGTGAATTGCTTGAACATTCAA 57.820 34.783 6.85 6.85 44.31 2.69
146 147 5.586339 TCGTGAATTGCTTGAACATTCAAA 58.414 33.333 8.33 0.00 45.61 2.69
147 148 6.215121 TCGTGAATTGCTTGAACATTCAAAT 58.785 32.000 8.33 0.00 45.61 2.32
148 149 6.700960 TCGTGAATTGCTTGAACATTCAAATT 59.299 30.769 8.33 5.69 45.61 1.82
149 150 7.224362 TCGTGAATTGCTTGAACATTCAAATTT 59.776 29.630 8.33 0.00 45.61 1.82
150 151 8.486383 CGTGAATTGCTTGAACATTCAAATTTA 58.514 29.630 8.33 0.96 45.61 1.40
174 175 7.701539 ATGTTTAGATTCTATTTGTGTGCCA 57.298 32.000 0.00 0.00 0.00 4.92
175 176 7.517614 TGTTTAGATTCTATTTGTGTGCCAA 57.482 32.000 0.00 0.00 0.00 4.52
176 177 8.121305 TGTTTAGATTCTATTTGTGTGCCAAT 57.879 30.769 0.00 0.00 31.81 3.16
177 178 9.237187 TGTTTAGATTCTATTTGTGTGCCAATA 57.763 29.630 0.00 0.00 31.81 1.90
180 181 7.886629 AGATTCTATTTGTGTGCCAATATGT 57.113 32.000 0.00 0.00 31.81 2.29
181 182 8.978874 AGATTCTATTTGTGTGCCAATATGTA 57.021 30.769 0.00 0.00 31.81 2.29
182 183 9.407380 AGATTCTATTTGTGTGCCAATATGTAA 57.593 29.630 0.00 0.00 31.81 2.41
185 186 9.800433 TTCTATTTGTGTGCCAATATGTAATTG 57.200 29.630 0.00 0.00 31.81 2.32
186 187 6.907206 ATTTGTGTGCCAATATGTAATTGC 57.093 33.333 0.00 0.00 31.81 3.56
187 188 5.397142 TTGTGTGCCAATATGTAATTGCA 57.603 34.783 0.00 0.00 0.00 4.08
188 189 5.397142 TGTGTGCCAATATGTAATTGCAA 57.603 34.783 0.00 0.00 0.00 4.08
189 190 5.975282 TGTGTGCCAATATGTAATTGCAAT 58.025 33.333 5.99 5.99 0.00 3.56
190 191 5.811100 TGTGTGCCAATATGTAATTGCAATG 59.189 36.000 13.82 0.00 0.00 2.82
191 192 5.811613 GTGTGCCAATATGTAATTGCAATGT 59.188 36.000 13.82 6.06 0.00 2.71
192 193 6.977502 GTGTGCCAATATGTAATTGCAATGTA 59.022 34.615 13.82 5.07 0.00 2.29
193 194 7.167968 GTGTGCCAATATGTAATTGCAATGTAG 59.832 37.037 13.82 0.00 0.00 2.74
194 195 6.642131 GTGCCAATATGTAATTGCAATGTAGG 59.358 38.462 13.82 7.91 0.00 3.18
195 196 6.548993 TGCCAATATGTAATTGCAATGTAGGA 59.451 34.615 13.82 0.00 0.00 2.94
196 197 7.086376 GCCAATATGTAATTGCAATGTAGGAG 58.914 38.462 13.82 0.00 0.00 3.69
197 198 7.255590 GCCAATATGTAATTGCAATGTAGGAGT 60.256 37.037 13.82 0.00 0.00 3.85
198 199 9.283768 CCAATATGTAATTGCAATGTAGGAGTA 57.716 33.333 13.82 0.00 0.00 2.59
207 208 9.632638 AATTGCAATGTAGGAGTATAATGAGTT 57.367 29.630 13.82 0.00 0.00 3.01
208 209 8.437360 TTGCAATGTAGGAGTATAATGAGTTG 57.563 34.615 0.00 0.00 0.00 3.16
209 210 6.483307 TGCAATGTAGGAGTATAATGAGTTGC 59.517 38.462 0.00 0.00 37.97 4.17
210 211 6.346919 GCAATGTAGGAGTATAATGAGTTGCG 60.347 42.308 0.00 0.00 0.00 4.85
211 212 5.196341 TGTAGGAGTATAATGAGTTGCGG 57.804 43.478 0.00 0.00 0.00 5.69
212 213 4.891168 TGTAGGAGTATAATGAGTTGCGGA 59.109 41.667 0.00 0.00 0.00 5.54
213 214 4.592485 AGGAGTATAATGAGTTGCGGAG 57.408 45.455 0.00 0.00 0.00 4.63
214 215 3.961408 AGGAGTATAATGAGTTGCGGAGT 59.039 43.478 0.00 0.00 0.00 3.85
215 216 4.406003 AGGAGTATAATGAGTTGCGGAGTT 59.594 41.667 0.00 0.00 0.00 3.01
216 217 5.104900 AGGAGTATAATGAGTTGCGGAGTTT 60.105 40.000 0.00 0.00 0.00 2.66
217 218 6.097839 AGGAGTATAATGAGTTGCGGAGTTTA 59.902 38.462 0.00 0.00 0.00 2.01
218 219 6.759827 GGAGTATAATGAGTTGCGGAGTTTAA 59.240 38.462 0.00 0.00 0.00 1.52
219 220 7.279313 GGAGTATAATGAGTTGCGGAGTTTAAA 59.721 37.037 0.00 0.00 0.00 1.52
220 221 8.556213 AGTATAATGAGTTGCGGAGTTTAAAA 57.444 30.769 0.00 0.00 0.00 1.52
221 222 9.005777 AGTATAATGAGTTGCGGAGTTTAAAAA 57.994 29.630 0.00 0.00 0.00 1.94
261 262 8.943909 ATACTACTCCCTTCGTTTCAAAATAG 57.056 34.615 0.00 0.00 0.00 1.73
262 263 7.001099 ACTACTCCCTTCGTTTCAAAATAGA 57.999 36.000 0.00 0.00 0.00 1.98
263 264 7.621796 ACTACTCCCTTCGTTTCAAAATAGAT 58.378 34.615 0.00 0.00 0.00 1.98
264 265 8.755977 ACTACTCCCTTCGTTTCAAAATAGATA 58.244 33.333 0.00 0.00 0.00 1.98
265 266 9.595823 CTACTCCCTTCGTTTCAAAATAGATAA 57.404 33.333 0.00 0.00 0.00 1.75
266 267 8.265165 ACTCCCTTCGTTTCAAAATAGATAAC 57.735 34.615 0.00 0.00 0.00 1.89
267 268 7.336176 ACTCCCTTCGTTTCAAAATAGATAACC 59.664 37.037 0.00 0.00 0.00 2.85
268 269 6.600427 TCCCTTCGTTTCAAAATAGATAACCC 59.400 38.462 0.00 0.00 0.00 4.11
269 270 6.376018 CCCTTCGTTTCAAAATAGATAACCCA 59.624 38.462 0.00 0.00 0.00 4.51
270 271 7.094118 CCCTTCGTTTCAAAATAGATAACCCAA 60.094 37.037 0.00 0.00 0.00 4.12
271 272 7.753580 CCTTCGTTTCAAAATAGATAACCCAAC 59.246 37.037 0.00 0.00 0.00 3.77
272 273 7.989416 TCGTTTCAAAATAGATAACCCAACT 57.011 32.000 0.00 0.00 0.00 3.16
273 274 8.398878 TCGTTTCAAAATAGATAACCCAACTT 57.601 30.769 0.00 0.00 0.00 2.66
274 275 8.852135 TCGTTTCAAAATAGATAACCCAACTTT 58.148 29.630 0.00 0.00 0.00 2.66
275 276 8.911662 CGTTTCAAAATAGATAACCCAACTTTG 58.088 33.333 0.00 0.00 0.00 2.77
276 277 9.758651 GTTTCAAAATAGATAACCCAACTTTGT 57.241 29.630 0.00 0.00 0.00 2.83
279 280 9.802039 TCAAAATAGATAACCCAACTTTGTACT 57.198 29.630 0.00 0.00 0.00 2.73
286 287 8.491958 AGATAACCCAACTTTGTACTATAAGGG 58.508 37.037 0.00 0.00 39.66 3.95
287 288 6.707273 AACCCAACTTTGTACTATAAGGGA 57.293 37.500 14.05 0.00 37.23 4.20
288 289 6.903340 ACCCAACTTTGTACTATAAGGGAT 57.097 37.500 14.05 0.51 37.23 3.85
289 290 7.280044 ACCCAACTTTGTACTATAAGGGATT 57.720 36.000 14.05 0.00 37.23 3.01
290 291 7.116736 ACCCAACTTTGTACTATAAGGGATTG 58.883 38.462 14.05 7.08 37.23 2.67
291 292 6.546034 CCCAACTTTGTACTATAAGGGATTGG 59.454 42.308 0.00 5.86 35.81 3.16
292 293 7.116736 CCAACTTTGTACTATAAGGGATTGGT 58.883 38.462 0.00 0.00 0.00 3.67
293 294 7.614192 CCAACTTTGTACTATAAGGGATTGGTT 59.386 37.037 0.00 0.00 0.00 3.67
294 295 9.675464 CAACTTTGTACTATAAGGGATTGGTTA 57.325 33.333 0.00 0.00 0.00 2.85
295 296 9.901172 AACTTTGTACTATAAGGGATTGGTTAG 57.099 33.333 0.00 0.00 0.00 2.34
296 297 8.491958 ACTTTGTACTATAAGGGATTGGTTAGG 58.508 37.037 0.00 0.00 0.00 2.69
297 298 8.396619 TTTGTACTATAAGGGATTGGTTAGGT 57.603 34.615 0.00 0.00 0.00 3.08
298 299 7.607615 TGTACTATAAGGGATTGGTTAGGTC 57.392 40.000 0.00 0.00 0.00 3.85
299 300 6.556116 TGTACTATAAGGGATTGGTTAGGTCC 59.444 42.308 0.00 0.00 0.00 4.46
302 303 1.153025 GGGATTGGTTAGGTCCCGC 60.153 63.158 0.00 0.00 41.99 6.13
303 304 1.153025 GGATTGGTTAGGTCCCGCC 60.153 63.158 0.00 0.00 37.58 6.13
304 305 1.605453 GATTGGTTAGGTCCCGCCA 59.395 57.895 0.00 0.00 40.61 5.69
305 306 0.034863 GATTGGTTAGGTCCCGCCAA 60.035 55.000 10.62 10.62 43.95 4.52
306 307 0.406361 ATTGGTTAGGTCCCGCCAAA 59.594 50.000 11.83 0.00 43.19 3.28
307 308 0.185416 TTGGTTAGGTCCCGCCAAAA 59.815 50.000 6.86 0.00 37.97 2.44
308 309 0.537828 TGGTTAGGTCCCGCCAAAAC 60.538 55.000 0.00 0.00 40.61 2.43
309 310 0.251033 GGTTAGGTCCCGCCAAAACT 60.251 55.000 0.00 0.00 40.61 2.66
310 311 1.612676 GTTAGGTCCCGCCAAAACTT 58.387 50.000 0.00 0.00 40.61 2.66
311 312 1.958579 GTTAGGTCCCGCCAAAACTTT 59.041 47.619 0.00 0.00 40.61 2.66
312 313 1.611519 TAGGTCCCGCCAAAACTTTG 58.388 50.000 0.00 0.00 40.61 2.77
313 314 1.300620 GGTCCCGCCAAAACTTTGC 60.301 57.895 0.00 0.00 36.86 3.68
314 315 1.439644 GTCCCGCCAAAACTTTGCA 59.560 52.632 0.00 0.00 36.86 4.08
315 316 0.179097 GTCCCGCCAAAACTTTGCAA 60.179 50.000 0.00 0.00 36.86 4.08
316 317 0.179097 TCCCGCCAAAACTTTGCAAC 60.179 50.000 0.00 0.00 36.86 4.17
317 318 0.179086 CCCGCCAAAACTTTGCAACT 60.179 50.000 0.00 0.00 36.86 3.16
318 319 1.208259 CCGCCAAAACTTTGCAACTC 58.792 50.000 0.00 0.00 36.86 3.01
319 320 1.470632 CCGCCAAAACTTTGCAACTCA 60.471 47.619 0.00 0.00 36.86 3.41
320 321 1.854126 CGCCAAAACTTTGCAACTCAG 59.146 47.619 0.00 0.00 36.86 3.35
321 322 2.735126 CGCCAAAACTTTGCAACTCAGT 60.735 45.455 0.00 0.00 36.86 3.41
322 323 3.488384 CGCCAAAACTTTGCAACTCAGTA 60.488 43.478 0.00 0.00 36.86 2.74
323 324 4.429108 GCCAAAACTTTGCAACTCAGTAA 58.571 39.130 0.00 0.00 36.86 2.24
324 325 4.867608 GCCAAAACTTTGCAACTCAGTAAA 59.132 37.500 0.00 0.00 36.86 2.01
325 326 5.220397 GCCAAAACTTTGCAACTCAGTAAAC 60.220 40.000 0.00 0.00 36.86 2.01
326 327 6.099341 CCAAAACTTTGCAACTCAGTAAACT 58.901 36.000 0.00 0.00 36.86 2.66
327 328 6.253512 CCAAAACTTTGCAACTCAGTAAACTC 59.746 38.462 0.00 0.00 36.86 3.01
328 329 5.500645 AACTTTGCAACTCAGTAAACTCC 57.499 39.130 0.00 0.00 0.00 3.85
329 330 4.523083 ACTTTGCAACTCAGTAAACTCCA 58.477 39.130 0.00 0.00 0.00 3.86
330 331 4.335594 ACTTTGCAACTCAGTAAACTCCAC 59.664 41.667 0.00 0.00 0.00 4.02
331 332 2.846193 TGCAACTCAGTAAACTCCACC 58.154 47.619 0.00 0.00 0.00 4.61
332 333 1.798813 GCAACTCAGTAAACTCCACCG 59.201 52.381 0.00 0.00 0.00 4.94
333 334 2.413837 CAACTCAGTAAACTCCACCGG 58.586 52.381 0.00 0.00 0.00 5.28
334 335 2.005370 ACTCAGTAAACTCCACCGGA 57.995 50.000 9.46 0.00 0.00 5.14
335 336 2.537143 ACTCAGTAAACTCCACCGGAT 58.463 47.619 9.46 0.00 0.00 4.18
336 337 2.496470 ACTCAGTAAACTCCACCGGATC 59.504 50.000 9.46 0.00 0.00 3.36
337 338 1.475280 TCAGTAAACTCCACCGGATCG 59.525 52.381 9.46 0.00 0.00 3.69
338 339 1.203994 CAGTAAACTCCACCGGATCGT 59.796 52.381 9.46 0.00 0.00 3.73
339 340 1.897802 AGTAAACTCCACCGGATCGTT 59.102 47.619 9.46 2.65 0.00 3.85
340 341 2.094338 AGTAAACTCCACCGGATCGTTC 60.094 50.000 9.46 0.00 0.00 3.95
341 342 0.974383 AAACTCCACCGGATCGTTCT 59.026 50.000 9.46 0.00 0.00 3.01
342 343 0.974383 AACTCCACCGGATCGTTCTT 59.026 50.000 9.46 0.00 0.00 2.52
343 344 0.974383 ACTCCACCGGATCGTTCTTT 59.026 50.000 9.46 0.00 0.00 2.52
344 345 2.173519 ACTCCACCGGATCGTTCTTTA 58.826 47.619 9.46 0.00 0.00 1.85
345 346 2.764572 ACTCCACCGGATCGTTCTTTAT 59.235 45.455 9.46 0.00 0.00 1.40
346 347 3.197116 ACTCCACCGGATCGTTCTTTATT 59.803 43.478 9.46 0.00 0.00 1.40
347 348 4.189231 CTCCACCGGATCGTTCTTTATTT 58.811 43.478 9.46 0.00 0.00 1.40
348 349 5.105228 ACTCCACCGGATCGTTCTTTATTTA 60.105 40.000 9.46 0.00 0.00 1.40
349 350 5.920903 TCCACCGGATCGTTCTTTATTTAT 58.079 37.500 9.46 0.00 0.00 1.40
350 351 5.987347 TCCACCGGATCGTTCTTTATTTATC 59.013 40.000 9.46 0.00 0.00 1.75
351 352 5.107607 CCACCGGATCGTTCTTTATTTATCG 60.108 44.000 9.46 0.00 0.00 2.92
352 353 4.986659 ACCGGATCGTTCTTTATTTATCGG 59.013 41.667 9.46 0.00 0.00 4.18
353 354 4.387862 CCGGATCGTTCTTTATTTATCGGG 59.612 45.833 0.00 0.00 0.00 5.14
354 355 5.224888 CGGATCGTTCTTTATTTATCGGGA 58.775 41.667 0.00 0.00 0.00 5.14
355 356 5.693104 CGGATCGTTCTTTATTTATCGGGAA 59.307 40.000 0.00 0.00 0.00 3.97
356 357 6.367969 CGGATCGTTCTTTATTTATCGGGAAT 59.632 38.462 0.00 0.00 0.00 3.01
357 358 7.411588 CGGATCGTTCTTTATTTATCGGGAATC 60.412 40.741 0.00 0.00 0.00 2.52
358 359 6.758593 TCGTTCTTTATTTATCGGGAATCG 57.241 37.500 0.00 0.00 40.90 3.34
359 360 6.275335 TCGTTCTTTATTTATCGGGAATCGT 58.725 36.000 0.00 0.00 40.32 3.73
360 361 6.757947 TCGTTCTTTATTTATCGGGAATCGTT 59.242 34.615 0.00 0.00 40.32 3.85
361 362 7.278424 TCGTTCTTTATTTATCGGGAATCGTTT 59.722 33.333 0.00 0.00 40.32 3.60
362 363 8.542132 CGTTCTTTATTTATCGGGAATCGTTTA 58.458 33.333 0.00 0.00 40.32 2.01
363 364 9.859692 GTTCTTTATTTATCGGGAATCGTTTAG 57.140 33.333 0.00 0.00 40.32 1.85
364 365 9.820725 TTCTTTATTTATCGGGAATCGTTTAGA 57.179 29.630 0.00 0.00 40.32 2.10
365 366 9.820725 TCTTTATTTATCGGGAATCGTTTAGAA 57.179 29.630 0.00 0.00 40.32 2.10
369 370 4.813296 ATCGGGAATCGTTTAGAAATGC 57.187 40.909 0.00 0.00 40.32 3.56
370 371 2.940410 TCGGGAATCGTTTAGAAATGCC 59.060 45.455 0.00 0.00 40.32 4.40
371 372 2.680841 CGGGAATCGTTTAGAAATGCCA 59.319 45.455 0.00 0.00 32.34 4.92
372 373 3.315191 CGGGAATCGTTTAGAAATGCCAT 59.685 43.478 0.00 0.00 32.34 4.40
373 374 4.554723 CGGGAATCGTTTAGAAATGCCATC 60.555 45.833 0.00 0.00 32.34 3.51
374 375 4.338118 GGGAATCGTTTAGAAATGCCATCA 59.662 41.667 0.00 0.00 32.83 3.07
375 376 5.010012 GGGAATCGTTTAGAAATGCCATCAT 59.990 40.000 0.00 0.00 32.83 2.45
376 377 5.916883 GGAATCGTTTAGAAATGCCATCATG 59.083 40.000 0.00 0.00 32.23 3.07
377 378 6.455360 AATCGTTTAGAAATGCCATCATGT 57.545 33.333 0.00 0.00 32.23 3.21
378 379 7.255104 GGAATCGTTTAGAAATGCCATCATGTA 60.255 37.037 0.00 0.00 32.23 2.29
379 380 7.750229 ATCGTTTAGAAATGCCATCATGTAT 57.250 32.000 0.00 0.00 32.23 2.29
380 381 7.566760 TCGTTTAGAAATGCCATCATGTATT 57.433 32.000 0.00 0.00 32.23 1.89
381 382 8.669946 TCGTTTAGAAATGCCATCATGTATTA 57.330 30.769 0.00 0.00 32.23 0.98
382 383 9.283768 TCGTTTAGAAATGCCATCATGTATTAT 57.716 29.630 0.00 0.00 32.23 1.28
420 421 7.585286 AATTTTACGTATGTGAGCGACTTTA 57.415 32.000 0.00 0.00 0.00 1.85
423 424 7.585286 TTTACGTATGTGAGCGACTTTAATT 57.415 32.000 0.00 0.00 0.00 1.40
427 428 3.536158 TGTGAGCGACTTTAATTGTGC 57.464 42.857 0.00 0.00 0.00 4.57
431 432 3.058983 TGAGCGACTTTAATTGTGCTGTG 60.059 43.478 0.00 0.00 31.88 3.66
433 434 3.315191 AGCGACTTTAATTGTGCTGTGTT 59.685 39.130 0.00 0.00 0.00 3.32
533 535 2.879233 GCTCGGGGTGAAGTGTCCA 61.879 63.158 0.00 0.00 0.00 4.02
619 626 0.178947 CCCCCACCAGCTAAACCAAA 60.179 55.000 0.00 0.00 0.00 3.28
625 632 3.191371 CCACCAGCTAAACCAAAGACATC 59.809 47.826 0.00 0.00 0.00 3.06
646 653 2.607750 GCCCAGACCAGACCTCCA 60.608 66.667 0.00 0.00 0.00 3.86
650 657 1.261238 CCAGACCAGACCTCCACTCC 61.261 65.000 0.00 0.00 0.00 3.85
651 658 1.079438 AGACCAGACCTCCACTCCC 59.921 63.158 0.00 0.00 0.00 4.30
652 659 1.990614 GACCAGACCTCCACTCCCC 60.991 68.421 0.00 0.00 0.00 4.81
653 660 2.122729 CCAGACCTCCACTCCCCA 59.877 66.667 0.00 0.00 0.00 4.96
654 661 1.307343 CCAGACCTCCACTCCCCAT 60.307 63.158 0.00 0.00 0.00 4.00
655 662 1.341156 CCAGACCTCCACTCCCCATC 61.341 65.000 0.00 0.00 0.00 3.51
656 663 1.003573 AGACCTCCACTCCCCATCC 59.996 63.158 0.00 0.00 0.00 3.51
657 664 2.042930 ACCTCCACTCCCCATCCC 59.957 66.667 0.00 0.00 0.00 3.85
658 665 2.374342 CCTCCACTCCCCATCCCT 59.626 66.667 0.00 0.00 0.00 4.20
659 666 1.236026 ACCTCCACTCCCCATCCCTA 61.236 60.000 0.00 0.00 0.00 3.53
660 667 0.764752 CCTCCACTCCCCATCCCTAC 60.765 65.000 0.00 0.00 0.00 3.18
661 668 0.764752 CTCCACTCCCCATCCCTACC 60.765 65.000 0.00 0.00 0.00 3.18
662 669 1.770518 CCACTCCCCATCCCTACCC 60.771 68.421 0.00 0.00 0.00 3.69
663 670 1.318380 CACTCCCCATCCCTACCCT 59.682 63.158 0.00 0.00 0.00 4.34
664 671 0.566176 CACTCCCCATCCCTACCCTA 59.434 60.000 0.00 0.00 0.00 3.53
826 857 3.866327 GGAAGAATCAAGGTACGAAGAGC 59.134 47.826 0.00 0.00 0.00 4.09
835 866 1.544691 GGTACGAAGAGCACTCTCCAA 59.455 52.381 0.00 0.00 39.39 3.53
836 867 2.166664 GGTACGAAGAGCACTCTCCAAT 59.833 50.000 0.00 0.00 39.39 3.16
837 868 3.368531 GGTACGAAGAGCACTCTCCAATT 60.369 47.826 0.00 0.00 39.39 2.32
838 869 3.409026 ACGAAGAGCACTCTCCAATTT 57.591 42.857 0.00 0.00 39.39 1.82
839 870 3.330267 ACGAAGAGCACTCTCCAATTTC 58.670 45.455 0.00 0.00 39.39 2.17
840 871 3.244215 ACGAAGAGCACTCTCCAATTTCA 60.244 43.478 0.00 0.00 39.39 2.69
841 872 3.124297 CGAAGAGCACTCTCCAATTTCAC 59.876 47.826 0.00 0.00 39.39 3.18
842 873 3.777106 AGAGCACTCTCCAATTTCACA 57.223 42.857 0.00 0.00 40.22 3.58
843 874 3.406764 AGAGCACTCTCCAATTTCACAC 58.593 45.455 0.00 0.00 40.22 3.82
844 875 3.141398 GAGCACTCTCCAATTTCACACA 58.859 45.455 0.00 0.00 33.19 3.72
845 876 3.755378 GAGCACTCTCCAATTTCACACAT 59.245 43.478 0.00 0.00 33.19 3.21
846 877 3.504906 AGCACTCTCCAATTTCACACATG 59.495 43.478 0.00 0.00 0.00 3.21
847 878 3.254166 GCACTCTCCAATTTCACACATGT 59.746 43.478 0.00 0.00 0.00 3.21
848 879 4.614535 GCACTCTCCAATTTCACACATGTC 60.615 45.833 0.00 0.00 0.00 3.06
849 880 4.516321 CACTCTCCAATTTCACACATGTCA 59.484 41.667 0.00 0.00 0.00 3.58
850 881 5.182570 CACTCTCCAATTTCACACATGTCAT 59.817 40.000 0.00 0.00 0.00 3.06
851 882 5.413833 ACTCTCCAATTTCACACATGTCATC 59.586 40.000 0.00 0.00 0.00 2.92
852 883 4.701651 TCTCCAATTTCACACATGTCATCC 59.298 41.667 0.00 0.00 0.00 3.51
853 884 3.763360 TCCAATTTCACACATGTCATCCC 59.237 43.478 0.00 0.00 0.00 3.85
854 885 3.119029 CCAATTTCACACATGTCATCCCC 60.119 47.826 0.00 0.00 0.00 4.81
855 886 3.744940 ATTTCACACATGTCATCCCCT 57.255 42.857 0.00 0.00 0.00 4.79
856 887 2.787473 TTCACACATGTCATCCCCTC 57.213 50.000 0.00 0.00 0.00 4.30
857 888 0.911769 TCACACATGTCATCCCCTCC 59.088 55.000 0.00 0.00 0.00 4.30
858 889 0.914644 CACACATGTCATCCCCTCCT 59.085 55.000 0.00 0.00 0.00 3.69
859 890 1.134280 CACACATGTCATCCCCTCCTC 60.134 57.143 0.00 0.00 0.00 3.71
860 891 0.105593 CACATGTCATCCCCTCCTCG 59.894 60.000 0.00 0.00 0.00 4.63
861 892 1.070445 CATGTCATCCCCTCCTCGC 59.930 63.158 0.00 0.00 0.00 5.03
862 893 2.502492 ATGTCATCCCCTCCTCGCG 61.502 63.158 0.00 0.00 0.00 5.87
863 894 3.917760 GTCATCCCCTCCTCGCGG 61.918 72.222 6.13 0.00 0.00 6.46
864 895 4.458829 TCATCCCCTCCTCGCGGT 62.459 66.667 6.13 0.00 0.00 5.68
865 896 4.227134 CATCCCCTCCTCGCGGTG 62.227 72.222 6.13 0.00 0.00 4.94
869 900 3.458163 CCCTCCTCGCGGTGCTAA 61.458 66.667 6.13 0.00 0.00 3.09
870 901 2.202756 CCTCCTCGCGGTGCTAAC 60.203 66.667 6.13 0.00 0.00 2.34
871 902 2.711922 CCTCCTCGCGGTGCTAACT 61.712 63.158 6.13 0.00 0.00 2.24
872 903 1.226717 CTCCTCGCGGTGCTAACTC 60.227 63.158 6.13 0.00 0.00 3.01
873 904 1.658686 CTCCTCGCGGTGCTAACTCT 61.659 60.000 6.13 0.00 0.00 3.24
874 905 1.517257 CCTCGCGGTGCTAACTCTG 60.517 63.158 6.13 0.00 0.00 3.35
875 906 2.126071 TCGCGGTGCTAACTCTGC 60.126 61.111 6.13 0.00 38.13 4.26
876 907 2.125912 CGCGGTGCTAACTCTGCT 60.126 61.111 0.00 0.00 39.11 4.24
877 908 2.161486 CGCGGTGCTAACTCTGCTC 61.161 63.158 0.00 0.00 39.11 4.26
878 909 1.216710 GCGGTGCTAACTCTGCTCT 59.783 57.895 0.00 0.00 38.39 4.09
879 910 0.456221 GCGGTGCTAACTCTGCTCTA 59.544 55.000 0.00 0.00 38.39 2.43
880 911 1.535015 GCGGTGCTAACTCTGCTCTAG 60.535 57.143 0.00 0.00 38.39 2.43
881 912 1.746220 CGGTGCTAACTCTGCTCTAGT 59.254 52.381 0.00 0.00 0.00 2.57
882 913 2.164624 CGGTGCTAACTCTGCTCTAGTT 59.835 50.000 0.00 0.00 40.25 2.24
883 914 3.367498 CGGTGCTAACTCTGCTCTAGTTT 60.367 47.826 4.62 0.00 38.18 2.66
884 915 4.142447 CGGTGCTAACTCTGCTCTAGTTTA 60.142 45.833 4.62 0.00 38.18 2.01
885 916 5.344884 GGTGCTAACTCTGCTCTAGTTTAG 58.655 45.833 4.62 0.00 38.18 1.85
886 917 5.344884 GTGCTAACTCTGCTCTAGTTTAGG 58.655 45.833 4.62 0.00 38.18 2.69
887 918 5.125739 GTGCTAACTCTGCTCTAGTTTAGGA 59.874 44.000 4.62 0.00 38.18 2.94
888 919 5.715279 TGCTAACTCTGCTCTAGTTTAGGAA 59.285 40.000 4.62 0.00 38.18 3.36
889 920 6.381420 TGCTAACTCTGCTCTAGTTTAGGAAT 59.619 38.462 4.62 0.00 38.18 3.01
890 921 7.093289 TGCTAACTCTGCTCTAGTTTAGGAATT 60.093 37.037 4.62 0.00 38.18 2.17
891 922 7.436970 GCTAACTCTGCTCTAGTTTAGGAATTC 59.563 40.741 0.00 0.00 38.18 2.17
892 923 7.489239 AACTCTGCTCTAGTTTAGGAATTCT 57.511 36.000 5.23 0.00 33.39 2.40
893 924 6.872920 ACTCTGCTCTAGTTTAGGAATTCTG 58.127 40.000 5.23 0.00 0.00 3.02
894 925 5.665459 TCTGCTCTAGTTTAGGAATTCTGC 58.335 41.667 5.23 0.00 0.00 4.26
895 926 5.423610 TCTGCTCTAGTTTAGGAATTCTGCT 59.576 40.000 5.23 0.00 0.00 4.24
896 927 5.665459 TGCTCTAGTTTAGGAATTCTGCTC 58.335 41.667 5.23 0.00 0.00 4.26
897 928 5.053811 GCTCTAGTTTAGGAATTCTGCTCC 58.946 45.833 5.23 0.00 0.00 4.70
898 929 5.395768 GCTCTAGTTTAGGAATTCTGCTCCA 60.396 44.000 5.23 0.00 35.20 3.86
899 930 6.227298 TCTAGTTTAGGAATTCTGCTCCAG 57.773 41.667 5.23 0.00 35.20 3.86
900 931 4.917906 AGTTTAGGAATTCTGCTCCAGT 57.082 40.909 5.23 0.00 35.20 4.00
901 932 4.837972 AGTTTAGGAATTCTGCTCCAGTC 58.162 43.478 5.23 0.00 35.20 3.51
902 933 4.534103 AGTTTAGGAATTCTGCTCCAGTCT 59.466 41.667 5.23 0.00 35.20 3.24
903 934 4.744795 TTAGGAATTCTGCTCCAGTCTC 57.255 45.455 5.23 0.00 35.20 3.36
904 935 1.836802 AGGAATTCTGCTCCAGTCTCC 59.163 52.381 5.23 0.00 35.20 3.71
905 936 1.556911 GGAATTCTGCTCCAGTCTCCA 59.443 52.381 5.23 0.00 32.77 3.86
906 937 2.172293 GGAATTCTGCTCCAGTCTCCAT 59.828 50.000 5.23 0.00 32.77 3.41
907 938 3.371380 GGAATTCTGCTCCAGTCTCCATT 60.371 47.826 5.23 0.00 32.77 3.16
908 939 4.268359 GAATTCTGCTCCAGTCTCCATTT 58.732 43.478 0.00 0.00 32.61 2.32
909 940 2.775911 TCTGCTCCAGTCTCCATTTG 57.224 50.000 0.00 0.00 32.61 2.32
910 941 1.280133 TCTGCTCCAGTCTCCATTTGG 59.720 52.381 0.00 0.00 32.61 3.28
911 942 0.322816 TGCTCCAGTCTCCATTTGGC 60.323 55.000 0.00 0.00 34.44 4.52
936 967 1.198867 CGTGCAAATTCATTCCCGTCA 59.801 47.619 0.00 0.00 0.00 4.35
937 968 2.159393 CGTGCAAATTCATTCCCGTCAT 60.159 45.455 0.00 0.00 0.00 3.06
938 969 3.673052 CGTGCAAATTCATTCCCGTCATT 60.673 43.478 0.00 0.00 0.00 2.57
939 970 4.244862 GTGCAAATTCATTCCCGTCATTT 58.755 39.130 0.00 0.00 0.00 2.32
940 971 4.327087 GTGCAAATTCATTCCCGTCATTTC 59.673 41.667 0.00 0.00 0.00 2.17
941 972 4.220382 TGCAAATTCATTCCCGTCATTTCT 59.780 37.500 0.00 0.00 0.00 2.52
942 973 4.563976 GCAAATTCATTCCCGTCATTTCTG 59.436 41.667 0.00 0.00 0.00 3.02
943 974 5.713025 CAAATTCATTCCCGTCATTTCTGT 58.287 37.500 0.00 0.00 0.00 3.41
944 975 6.624861 GCAAATTCATTCCCGTCATTTCTGTA 60.625 38.462 0.00 0.00 0.00 2.74
945 976 6.683974 AATTCATTCCCGTCATTTCTGTAG 57.316 37.500 0.00 0.00 0.00 2.74
946 977 4.819105 TCATTCCCGTCATTTCTGTAGT 57.181 40.909 0.00 0.00 0.00 2.73
947 978 4.755411 TCATTCCCGTCATTTCTGTAGTC 58.245 43.478 0.00 0.00 0.00 2.59
948 979 3.604875 TTCCCGTCATTTCTGTAGTCC 57.395 47.619 0.00 0.00 0.00 3.85
949 980 2.816411 TCCCGTCATTTCTGTAGTCCT 58.184 47.619 0.00 0.00 0.00 3.85
950 981 2.496070 TCCCGTCATTTCTGTAGTCCTG 59.504 50.000 0.00 0.00 0.00 3.86
951 982 2.271800 CCGTCATTTCTGTAGTCCTGC 58.728 52.381 0.00 0.00 0.00 4.85
952 983 1.920574 CGTCATTTCTGTAGTCCTGCG 59.079 52.381 0.00 0.00 0.00 5.18
953 984 1.661112 GTCATTTCTGTAGTCCTGCGC 59.339 52.381 0.00 0.00 0.00 6.09
954 985 1.275010 TCATTTCTGTAGTCCTGCGCA 59.725 47.619 10.98 10.98 0.00 6.09
955 986 2.076100 CATTTCTGTAGTCCTGCGCAA 58.924 47.619 13.05 0.00 0.00 4.85
956 987 2.248280 TTTCTGTAGTCCTGCGCAAA 57.752 45.000 13.05 0.00 0.00 3.68
957 988 1.508632 TTCTGTAGTCCTGCGCAAAC 58.491 50.000 13.05 13.19 0.00 2.93
958 989 0.320421 TCTGTAGTCCTGCGCAAACC 60.320 55.000 13.05 1.04 0.00 3.27
959 990 0.602638 CTGTAGTCCTGCGCAAACCA 60.603 55.000 13.05 6.47 0.00 3.67
990 1021 4.148825 CCCGGCTTCTGACCCTCG 62.149 72.222 0.00 0.00 0.00 4.63
995 1026 0.606604 GGCTTCTGACCCTCGTTACA 59.393 55.000 0.00 0.00 0.00 2.41
997 1028 1.997669 CTTCTGACCCTCGTTACAGC 58.002 55.000 0.00 0.00 0.00 4.40
1001 1042 1.478510 CTGACCCTCGTTACAGCAGAT 59.521 52.381 0.00 0.00 0.00 2.90
1008 1049 1.148157 CGTTACAGCAGATGGAGCCG 61.148 60.000 0.00 0.00 0.00 5.52
1016 1057 4.148825 GATGGAGCCGGTGAGCGT 62.149 66.667 1.90 0.00 38.01 5.07
1017 1058 4.148825 ATGGAGCCGGTGAGCGTC 62.149 66.667 1.90 0.00 38.01 5.19
1045 1086 3.849951 CCATGGGGTCCGTCCTCG 61.850 72.222 2.85 0.00 40.23 4.63
1092 1133 3.339547 CCACGAGGTTCCCAATGTT 57.660 52.632 0.00 0.00 0.00 2.71
1105 1146 0.708370 CAATGTTGACGACGTCGAGG 59.292 55.000 41.52 16.09 43.02 4.63
1215 1256 3.453679 GAGGCGCGGGAGTTCTCT 61.454 66.667 8.83 0.00 0.00 3.10
1279 1326 1.600663 GCGACGGATCTGGTCATACTG 60.601 57.143 6.47 0.00 34.04 2.74
1289 1336 2.433604 CTGGTCATACTGCCTCAGATGT 59.566 50.000 0.29 0.00 35.18 3.06
1303 1350 5.792741 CCTCAGATGTCTTCTCTGAAAAGT 58.207 41.667 4.73 0.00 46.25 2.66
1371 1418 1.337703 GAGATCAGCGACAGCATCTCT 59.662 52.381 11.28 2.43 43.72 3.10
1420 1476 2.041265 ATCCCCGGGACTGCTCTT 59.959 61.111 26.32 0.00 32.98 2.85
1483 1539 2.578495 CTGCTGAACTCGTCAAAATGC 58.422 47.619 0.00 0.00 35.22 3.56
1501 1557 1.612442 CTGAACGGGGGAGGGAAGA 60.612 63.158 0.00 0.00 0.00 2.87
1504 1560 2.538512 GAACGGGGGAGGGAAGAAGC 62.539 65.000 0.00 0.00 0.00 3.86
1639 1695 2.665185 GACCTCGTGTGGTGGCAC 60.665 66.667 9.70 9.70 41.00 5.01
1650 1706 0.178992 TGGTGGCACTTTTGAGGGAG 60.179 55.000 18.45 0.00 0.00 4.30
1689 1745 2.227388 CTGTGAGCATGACCAAACCTTC 59.773 50.000 0.00 0.00 0.00 3.46
1700 1756 2.711009 ACCAAACCTTCACTGAGGATGA 59.289 45.455 0.00 0.00 39.25 2.92
1720 1776 2.096442 CAATCGCTCGCTGACAGCA 61.096 57.895 26.32 12.85 42.58 4.41
1734 1790 4.774124 CTGACAGCATCTCCAATTTCCTA 58.226 43.478 0.00 0.00 0.00 2.94
1750 1806 7.832187 CCAATTTCCTACAGGATAAAAGGTACA 59.168 37.037 0.00 0.00 44.98 2.90
1823 1886 1.619654 CCACAGCATTTCACCTTCCA 58.380 50.000 0.00 0.00 0.00 3.53
1889 1959 6.954944 GCATGTGGCTATTTTTATCTTCGTA 58.045 36.000 0.00 0.00 40.25 3.43
1932 2002 4.072839 AGATCCGTGCGAGAGAATATACA 58.927 43.478 0.00 0.00 0.00 2.29
1933 2003 4.702612 AGATCCGTGCGAGAGAATATACAT 59.297 41.667 0.00 0.00 0.00 2.29
1934 2004 4.848562 TCCGTGCGAGAGAATATACATT 57.151 40.909 0.00 0.00 0.00 2.71
1935 2005 5.196341 TCCGTGCGAGAGAATATACATTT 57.804 39.130 0.00 0.00 0.00 2.32
1937 2007 6.147581 TCCGTGCGAGAGAATATACATTTAC 58.852 40.000 0.00 0.00 0.00 2.01
2031 2101 5.473504 ACTCATTCCACACTACCATGTTTTC 59.526 40.000 0.00 0.00 0.00 2.29
2032 2102 4.764823 TCATTCCACACTACCATGTTTTCC 59.235 41.667 0.00 0.00 0.00 3.13
2039 2109 6.882140 CCACACTACCATGTTTTCCAATAGTA 59.118 38.462 0.00 0.00 0.00 1.82
2091 2163 4.944962 TGTGACACACTTTTCACTGAAG 57.055 40.909 3.56 0.00 42.31 3.02
2093 2165 5.483811 TGTGACACACTTTTCACTGAAGTA 58.516 37.500 3.56 0.00 42.31 2.24
2096 2168 5.580691 TGACACACTTTTCACTGAAGTACTG 59.419 40.000 0.00 0.00 35.68 2.74
2097 2169 5.730550 ACACACTTTTCACTGAAGTACTGA 58.269 37.500 0.00 0.00 35.68 3.41
2106 2178 3.246226 CACTGAAGTACTGAACTGCACAC 59.754 47.826 0.00 0.00 38.99 3.82
2113 2185 7.282224 TGAAGTACTGAACTGCACACTAAATTT 59.718 33.333 0.00 0.00 38.99 1.82
2156 2231 6.959671 TTGTGTAAAAACTGCTTCCTTTTG 57.040 33.333 0.00 0.00 0.00 2.44
2283 2358 7.416964 TTTGGGGAATTTTACCTACATGATG 57.583 36.000 0.00 0.00 0.00 3.07
2380 2455 9.139174 AGTGTGTTTCTTTATTTTTGTTGTCAG 57.861 29.630 0.00 0.00 0.00 3.51
2381 2456 8.921670 GTGTGTTTCTTTATTTTTGTTGTCAGT 58.078 29.630 0.00 0.00 0.00 3.41
2391 2466 5.826601 TTTTGTTGTCAGTGATTGTAGCA 57.173 34.783 0.00 0.00 0.00 3.49
2394 2469 3.752747 TGTTGTCAGTGATTGTAGCATGG 59.247 43.478 0.00 0.00 0.00 3.66
2396 2471 4.817318 TGTCAGTGATTGTAGCATGGTA 57.183 40.909 0.00 0.00 0.00 3.25
2431 2506 5.372343 AATCATGTGCCAGGTACTTGATA 57.628 39.130 28.44 11.72 40.15 2.15
2518 2593 5.664294 ATTTTGGCAGCAGAATAATCACA 57.336 34.783 0.00 0.00 0.00 3.58
2548 2623 5.696724 GCGTATACATGAAGTAGCCAAATCT 59.303 40.000 0.00 0.00 35.85 2.40
2580 2655 3.971305 TCATGTGGGGGTCGAGTTTATAT 59.029 43.478 0.00 0.00 0.00 0.86
2665 2740 2.035626 CAATGCCCGTCCCACCTT 59.964 61.111 0.00 0.00 0.00 3.50
2692 2767 5.371526 AGAGTTTCTGACAAGATCTTGCAA 58.628 37.500 30.95 19.76 44.03 4.08
2788 2863 4.286032 TGGGAGCAAGTGTACAGTTCTATT 59.714 41.667 13.12 0.00 0.00 1.73
2845 2920 5.324409 AGAACCATGAGGATTTTGTTGCTA 58.676 37.500 0.00 0.00 38.69 3.49
2863 2938 6.070767 TGTTGCTAGGCTACTTTGATCTTACT 60.071 38.462 0.00 0.00 35.51 2.24
2878 2953 6.957631 TGATCTTACTCCTTGCCTAAAATCA 58.042 36.000 0.00 0.00 0.00 2.57
2890 2965 4.142182 TGCCTAAAATCATGCCTGCTTTAC 60.142 41.667 0.00 0.00 0.00 2.01
2905 2980 3.585289 TGCTTTACCTCAGTGTATTCCCA 59.415 43.478 0.00 0.00 0.00 4.37
3000 3075 3.077359 GGCACACCCTATATGAATCAGC 58.923 50.000 0.00 0.00 0.00 4.26
3064 3139 5.828328 CCAACCAGGGGAGATAAATAAGTTC 59.172 44.000 0.00 0.00 0.00 3.01
3113 3188 6.041182 CCATGGCATAATTCTTGATTTCCTCA 59.959 38.462 0.00 0.00 0.00 3.86
3115 3190 7.046292 TGGCATAATTCTTGATTTCCTCATG 57.954 36.000 0.00 0.00 32.72 3.07
3128 3203 3.786368 TCCTCATGTCCATGTCAAACA 57.214 42.857 7.13 0.00 39.72 2.83
3193 3268 2.300066 GCCGCAAAACAAAGTCCGC 61.300 57.895 0.00 0.00 0.00 5.54
3197 3272 0.933047 GCAAAACAAAGTCCGCCGAC 60.933 55.000 0.00 0.00 39.50 4.79
3272 3347 3.488553 CCGGTCACTTTCTGTTTTTGGTC 60.489 47.826 0.00 0.00 0.00 4.02
3273 3348 3.127895 CGGTCACTTTCTGTTTTTGGTCA 59.872 43.478 0.00 0.00 0.00 4.02
3297 3372 4.415596 TGTGTTAAAATGCCATCCCTCTT 58.584 39.130 0.00 0.00 0.00 2.85
3316 3391 0.937304 TGAAGTTCAGACACTTGCGC 59.063 50.000 0.00 0.00 37.11 6.09
3326 3401 4.455533 TCAGACACTTGCGCATTTTAGATT 59.544 37.500 12.75 0.00 0.00 2.40
3328 3403 5.630680 CAGACACTTGCGCATTTTAGATTTT 59.369 36.000 12.75 0.00 0.00 1.82
3375 3450 5.559770 TCAACATCTTGCAGAAATAGGTGA 58.440 37.500 2.64 0.00 0.00 4.02
3388 3463 4.970860 AATAGGTGATCTGGTCCATCTG 57.029 45.455 0.00 0.00 0.00 2.90
3450 3525 5.122396 CCCAACAAATAGCAGAGTTACAGTC 59.878 44.000 0.00 0.00 0.00 3.51
3459 3534 3.244249 GCAGAGTTACAGTCCTTGGAGTT 60.244 47.826 0.00 0.00 0.00 3.01
3478 3553 6.043411 GGAGTTACTTGAGATATGCGAAAGT 58.957 40.000 0.00 0.00 35.39 2.66
3517 3592 3.972133 TCCATCAGCCATCAATCAACTT 58.028 40.909 0.00 0.00 0.00 2.66
3607 3682 0.251033 TGCAAGTGCTCAGAGGCATT 60.251 50.000 4.69 0.00 44.34 3.56
3624 3699 3.258123 GGCATTAATGTCAACACCCAGTT 59.742 43.478 15.16 0.00 42.42 3.16
3742 3817 4.226427 CCAGGAAGAGATGGTCAATTCA 57.774 45.455 0.00 0.00 0.00 2.57
3743 3818 4.197750 CCAGGAAGAGATGGTCAATTCAG 58.802 47.826 0.00 0.00 0.00 3.02
3750 3825 6.550938 AGAGATGGTCAATTCAGTATGTCA 57.449 37.500 0.00 0.00 37.40 3.58
3758 3833 4.162131 TCAATTCAGTATGTCAGCTAGGCA 59.838 41.667 0.00 0.00 37.40 4.75
3880 3955 1.450312 CGAGGTGGGCATTGTCTCC 60.450 63.158 0.00 0.00 0.00 3.71
3896 3971 1.630369 TCTCCAGTGTTCCAAGATGGG 59.370 52.381 0.00 0.00 38.32 4.00
3925 4000 5.935945 TCACTTGTCAACCTCCAGAAATTA 58.064 37.500 0.00 0.00 0.00 1.40
3931 4006 2.403252 ACCTCCAGAAATTAGCGGTG 57.597 50.000 0.00 0.00 0.00 4.94
3991 4066 0.461961 GAAGCCTACCTGATCTGCGT 59.538 55.000 0.00 0.00 0.00 5.24
4010 4085 2.482664 CGTCATCTTAGCCTCACTGCAT 60.483 50.000 0.00 0.00 0.00 3.96
4036 4111 1.826385 CTGGATCAAAAGAAGGGCGT 58.174 50.000 0.00 0.00 0.00 5.68
4039 4114 2.010497 GGATCAAAAGAAGGGCGTCTC 58.990 52.381 0.00 0.00 0.00 3.36
4042 4117 1.691976 TCAAAAGAAGGGCGTCTCAGA 59.308 47.619 0.00 0.00 0.00 3.27
4073 4148 0.324645 CCATGGGTTCCCTTCCTTGG 60.325 60.000 2.85 0.00 40.44 3.61
4075 4150 1.638589 CATGGGTTCCCTTCCTTGGTA 59.361 52.381 9.43 0.00 0.00 3.25
4077 4152 1.708551 TGGGTTCCCTTCCTTGGTAAG 59.291 52.381 9.43 0.00 0.00 2.34
4082 4157 4.447325 GGTTCCCTTCCTTGGTAAGTTTCT 60.447 45.833 0.00 0.00 0.00 2.52
4083 4158 4.367039 TCCCTTCCTTGGTAAGTTTCTG 57.633 45.455 0.00 0.00 0.00 3.02
4108 4183 1.287730 GCGGAGAAGAGTGTGCACTG 61.288 60.000 19.41 0.00 42.66 3.66
4198 4273 3.601443 ACTAGTTCTGTGACTGATGGC 57.399 47.619 0.00 0.00 0.00 4.40
4290 4365 1.477685 ATTCGTCCCACGTTGGAGGT 61.478 55.000 23.07 6.91 40.96 3.85
4309 4384 2.029623 GTTGCCATGGAGAGATGCATT 58.970 47.619 18.40 0.00 0.00 3.56
4315 4390 3.744942 CCATGGAGAGATGCATTAACGAG 59.255 47.826 5.56 0.00 0.00 4.18
4416 4491 8.853126 ACACTCAAAAGTATGTACTGTACTGTA 58.147 33.333 17.98 8.40 36.50 2.74
4417 4492 9.856488 CACTCAAAAGTATGTACTGTACTGTAT 57.144 33.333 17.98 6.95 36.50 2.29
4452 4528 7.521669 TCTGTCTATCCTCTCACAATATCTCA 58.478 38.462 0.00 0.00 0.00 3.27
4499 4575 2.596346 TCAGGGCAAAATTCAAGCAGA 58.404 42.857 0.00 0.00 0.00 4.26
4507 4586 5.124457 GGCAAAATTCAAGCAGACTGATAGA 59.876 40.000 6.65 0.00 0.00 1.98
4521 4600 1.202452 TGATAGATGCACCTGCTCACG 60.202 52.381 0.00 0.00 42.66 4.35
4564 4643 2.949644 GGTGAACATGGTTATAGGGTGC 59.050 50.000 0.00 0.00 0.00 5.01
4660 4740 9.912634 TCTATCCAAAGTTTATTGCAAGAAAAG 57.087 29.630 20.00 11.53 0.00 2.27
4745 4898 9.157104 GGTTAACATTTTCTTTTTGTTCCTTCA 57.843 29.630 8.10 0.00 35.37 3.02
4763 4916 7.323049 TCCTTCATTGTTTCGTTAAAGTGAA 57.677 32.000 0.00 0.00 0.00 3.18
4773 4926 5.459110 TCGTTAAAGTGAACAAGTGACAC 57.541 39.130 0.00 0.00 35.15 3.67
4849 5050 5.582550 AGTACATCGACATCATAGTGTGTG 58.417 41.667 0.00 0.00 31.16 3.82
4889 5091 3.411517 CGGTCCCTGCCATCCCTT 61.412 66.667 0.00 0.00 0.00 3.95
4890 5092 2.276740 GGTCCCTGCCATCCCTTG 59.723 66.667 0.00 0.00 0.00 3.61
4891 5093 2.616458 GGTCCCTGCCATCCCTTGT 61.616 63.158 0.00 0.00 0.00 3.16
4896 5098 1.751927 CTGCCATCCCTTGTCAGGC 60.752 63.158 0.00 0.00 45.41 4.85
4938 5141 3.740495 CTCCTCCGGGGCTCAGCTA 62.740 68.421 0.00 0.00 34.39 3.32
4943 5146 3.077556 CGGGGCTCAGCTAGGTGT 61.078 66.667 20.76 0.00 0.00 4.16
4977 5180 4.329545 GCAGCCGGAGTTGGTGGA 62.330 66.667 5.05 0.00 0.00 4.02
4991 5194 1.080366 GTGGACCGCGTGTATCACA 60.080 57.895 4.92 0.00 33.40 3.58
5007 5210 4.697756 CACAAGGAAGCGGGCGGA 62.698 66.667 0.00 0.00 0.00 5.54
5168 5371 6.881065 ACCATATGCTATGTCATGTATGAACC 59.119 38.462 0.00 0.00 38.75 3.62
5173 5376 6.825610 TGCTATGTCATGTATGAACCATGTA 58.174 36.000 0.00 0.00 40.43 2.29
5174 5377 7.452562 TGCTATGTCATGTATGAACCATGTAT 58.547 34.615 0.00 0.00 40.43 2.29
5222 5425 5.106442 ACGTCGTTTGATCTATGTTGCATA 58.894 37.500 0.00 0.00 0.00 3.14
5247 5450 0.883833 GTGTGGATTTGAGCTGTGGG 59.116 55.000 0.00 0.00 0.00 4.61
5274 5477 0.185175 AAATGAGGGATAACCGGGCC 59.815 55.000 6.32 0.00 46.96 5.80
5275 5478 1.716028 AATGAGGGATAACCGGGCCC 61.716 60.000 13.57 13.57 46.96 5.80
5294 5497 1.228306 AGGAGGAGATAGCCGTCCG 60.228 63.158 0.00 0.00 37.97 4.79
5337 5540 2.357760 GGTACCCAAGCGTCGCAA 60.358 61.111 21.09 0.00 0.00 4.85
5338 5541 1.962306 GGTACCCAAGCGTCGCAAA 60.962 57.895 21.09 0.00 0.00 3.68
5339 5542 1.495951 GTACCCAAGCGTCGCAAAG 59.504 57.895 21.09 8.27 0.00 2.77
5340 5543 1.669760 TACCCAAGCGTCGCAAAGG 60.670 57.895 21.09 17.76 0.00 3.11
5341 5544 3.737172 CCCAAGCGTCGCAAAGGG 61.737 66.667 21.09 21.55 31.99 3.95
5342 5545 2.978010 CCAAGCGTCGCAAAGGGT 60.978 61.111 21.09 0.00 0.00 4.34
5343 5546 2.252260 CAAGCGTCGCAAAGGGTG 59.748 61.111 21.09 3.51 0.00 4.61
5344 5547 2.110213 AAGCGTCGCAAAGGGTGA 59.890 55.556 21.09 0.00 0.00 4.02
5345 5548 1.961277 AAGCGTCGCAAAGGGTGAG 60.961 57.895 21.09 0.00 36.51 3.51
5346 5549 2.660258 AAGCGTCGCAAAGGGTGAGT 62.660 55.000 21.09 0.00 36.51 3.41
5347 5550 2.668280 GCGTCGCAAAGGGTGAGTC 61.668 63.158 13.44 0.00 36.51 3.36
5348 5551 1.300620 CGTCGCAAAGGGTGAGTCA 60.301 57.895 0.00 0.00 36.51 3.41
5349 5552 1.557443 CGTCGCAAAGGGTGAGTCAC 61.557 60.000 15.24 15.24 36.51 3.67
5350 5553 1.300620 TCGCAAAGGGTGAGTCACG 60.301 57.895 16.89 4.02 34.83 4.35
5351 5554 1.594293 CGCAAAGGGTGAGTCACGT 60.594 57.895 16.89 4.09 34.83 4.49
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.915137 CTCCTCTCCTAGGCCGCC 60.915 72.222 2.96 0.00 46.10 6.13
1 2 3.611674 GCTCCTCTCCTAGGCCGC 61.612 72.222 2.96 0.00 46.10 6.53
2 3 2.915137 GGCTCCTCTCCTAGGCCG 60.915 72.222 2.96 0.00 46.10 6.13
4 5 0.766288 ATTGGGCTCCTCTCCTAGGC 60.766 60.000 2.96 0.00 46.10 3.93
5 6 5.338108 CCAAATTGGGCTCCTCTCCTAGG 62.338 56.522 3.60 0.82 39.39 3.02
6 7 2.158696 CCAAATTGGGCTCCTCTCCTAG 60.159 54.545 3.60 0.00 32.67 3.02
7 8 1.846439 CCAAATTGGGCTCCTCTCCTA 59.154 52.381 3.60 0.00 32.67 2.94
8 9 0.627986 CCAAATTGGGCTCCTCTCCT 59.372 55.000 3.60 0.00 32.67 3.69
9 10 3.197664 CCAAATTGGGCTCCTCTCC 57.802 57.895 3.60 0.00 32.67 3.71
18 19 0.752054 ATGTATGCGGCCAAATTGGG 59.248 50.000 14.59 0.00 38.19 4.12
19 20 3.940209 ATATGTATGCGGCCAAATTGG 57.060 42.857 7.84 7.84 41.55 3.16
20 21 7.621841 GCAAATAATATGTATGCGGCCAAATTG 60.622 37.037 2.24 0.00 0.00 2.32
21 22 6.368516 GCAAATAATATGTATGCGGCCAAATT 59.631 34.615 2.24 0.00 0.00 1.82
22 23 5.868801 GCAAATAATATGTATGCGGCCAAAT 59.131 36.000 2.24 0.00 0.00 2.32
23 24 5.010516 AGCAAATAATATGTATGCGGCCAAA 59.989 36.000 2.24 0.00 41.72 3.28
24 25 4.522405 AGCAAATAATATGTATGCGGCCAA 59.478 37.500 2.24 0.00 41.72 4.52
25 26 4.078537 AGCAAATAATATGTATGCGGCCA 58.921 39.130 2.24 0.00 41.72 5.36
26 27 4.701956 AGCAAATAATATGTATGCGGCC 57.298 40.909 0.00 0.00 41.72 6.13
27 28 6.176975 TGTAGCAAATAATATGTATGCGGC 57.823 37.500 0.00 0.00 41.72 6.53
28 29 9.064804 CAAATGTAGCAAATAATATGTATGCGG 57.935 33.333 0.00 0.00 41.72 5.69
29 30 9.064804 CCAAATGTAGCAAATAATATGTATGCG 57.935 33.333 0.00 0.00 41.72 4.73
33 34 9.634021 TGGTCCAAATGTAGCAAATAATATGTA 57.366 29.630 0.00 0.00 0.00 2.29
34 35 8.532186 TGGTCCAAATGTAGCAAATAATATGT 57.468 30.769 0.00 0.00 0.00 2.29
35 36 9.985730 AATGGTCCAAATGTAGCAAATAATATG 57.014 29.630 0.00 0.00 0.00 1.78
37 38 8.349245 CGAATGGTCCAAATGTAGCAAATAATA 58.651 33.333 0.00 0.00 0.00 0.98
38 39 7.202526 CGAATGGTCCAAATGTAGCAAATAAT 58.797 34.615 0.00 0.00 0.00 1.28
39 40 6.405286 CCGAATGGTCCAAATGTAGCAAATAA 60.405 38.462 0.00 0.00 0.00 1.40
40 41 5.067153 CCGAATGGTCCAAATGTAGCAAATA 59.933 40.000 0.00 0.00 0.00 1.40
41 42 4.142182 CCGAATGGTCCAAATGTAGCAAAT 60.142 41.667 0.00 0.00 0.00 2.32
42 43 3.192422 CCGAATGGTCCAAATGTAGCAAA 59.808 43.478 0.00 0.00 0.00 3.68
43 44 2.752354 CCGAATGGTCCAAATGTAGCAA 59.248 45.455 0.00 0.00 0.00 3.91
44 45 2.364632 CCGAATGGTCCAAATGTAGCA 58.635 47.619 0.00 0.00 0.00 3.49
45 46 1.065551 GCCGAATGGTCCAAATGTAGC 59.934 52.381 0.00 0.00 37.67 3.58
46 47 1.330521 CGCCGAATGGTCCAAATGTAG 59.669 52.381 0.00 0.00 37.67 2.74
47 48 1.339247 ACGCCGAATGGTCCAAATGTA 60.339 47.619 0.00 0.00 37.67 2.29
48 49 0.608035 ACGCCGAATGGTCCAAATGT 60.608 50.000 0.00 0.00 37.67 2.71
49 50 0.179166 CACGCCGAATGGTCCAAATG 60.179 55.000 0.00 0.00 37.67 2.32
50 51 0.608035 ACACGCCGAATGGTCCAAAT 60.608 50.000 0.00 0.00 37.67 2.32
51 52 0.820074 AACACGCCGAATGGTCCAAA 60.820 50.000 0.00 0.00 37.67 3.28
52 53 0.820074 AAACACGCCGAATGGTCCAA 60.820 50.000 0.00 0.00 37.67 3.53
53 54 0.035036 TAAACACGCCGAATGGTCCA 59.965 50.000 0.00 0.00 37.67 4.02
54 55 1.158434 TTAAACACGCCGAATGGTCC 58.842 50.000 0.00 0.00 37.67 4.46
55 56 2.973419 TTTAAACACGCCGAATGGTC 57.027 45.000 0.00 0.00 37.67 4.02
56 57 3.926821 AATTTAAACACGCCGAATGGT 57.073 38.095 0.00 0.00 37.67 3.55
57 58 4.230657 TCAAATTTAAACACGCCGAATGG 58.769 39.130 0.00 0.00 38.77 3.16
58 59 5.814314 TTCAAATTTAAACACGCCGAATG 57.186 34.783 0.00 0.00 0.00 2.67
59 60 8.696410 ATTATTCAAATTTAAACACGCCGAAT 57.304 26.923 0.00 0.00 0.00 3.34
60 61 8.522178 AATTATTCAAATTTAAACACGCCGAA 57.478 26.923 0.00 0.00 0.00 4.30
61 62 8.428536 CAAATTATTCAAATTTAAACACGCCGA 58.571 29.630 0.00 0.00 0.00 5.54
62 63 8.428536 TCAAATTATTCAAATTTAAACACGCCG 58.571 29.630 0.00 0.00 0.00 6.46
83 84 9.665719 ACCAAACTCAAAGTTTACAAATCAAAT 57.334 25.926 4.86 0.00 45.84 2.32
84 85 9.495572 AACCAAACTCAAAGTTTACAAATCAAA 57.504 25.926 4.86 0.00 45.84 2.69
85 86 9.495572 AAACCAAACTCAAAGTTTACAAATCAA 57.504 25.926 4.86 0.00 45.84 2.57
86 87 8.930760 CAAACCAAACTCAAAGTTTACAAATCA 58.069 29.630 4.86 0.00 45.84 2.57
87 88 8.931775 ACAAACCAAACTCAAAGTTTACAAATC 58.068 29.630 4.86 0.00 45.84 2.17
88 89 8.840833 ACAAACCAAACTCAAAGTTTACAAAT 57.159 26.923 4.86 0.00 45.84 2.32
89 90 9.760077 TTACAAACCAAACTCAAAGTTTACAAA 57.240 25.926 4.86 0.00 45.84 2.83
90 91 9.760077 TTTACAAACCAAACTCAAAGTTTACAA 57.240 25.926 4.86 0.00 45.84 2.41
91 92 9.194271 GTTTACAAACCAAACTCAAAGTTTACA 57.806 29.630 4.86 0.00 45.84 2.41
92 93 9.414295 AGTTTACAAACCAAACTCAAAGTTTAC 57.586 29.630 4.86 0.00 41.26 2.01
100 101 9.275398 ACGAATATAGTTTACAAACCAAACTCA 57.725 29.630 3.89 0.00 43.40 3.41
101 102 9.537848 CACGAATATAGTTTACAAACCAAACTC 57.462 33.333 3.89 0.00 43.40 3.01
102 103 9.275398 TCACGAATATAGTTTACAAACCAAACT 57.725 29.630 5.84 5.84 45.64 2.66
103 104 9.881529 TTCACGAATATAGTTTACAAACCAAAC 57.118 29.630 1.27 0.00 39.71 2.93
107 108 9.006215 GCAATTCACGAATATAGTTTACAAACC 57.994 33.333 1.27 0.00 39.71 3.27
108 109 9.769093 AGCAATTCACGAATATAGTTTACAAAC 57.231 29.630 0.00 0.00 39.17 2.93
110 111 9.767684 CAAGCAATTCACGAATATAGTTTACAA 57.232 29.630 0.00 0.00 0.00 2.41
111 112 9.157104 TCAAGCAATTCACGAATATAGTTTACA 57.843 29.630 0.00 0.00 0.00 2.41
112 113 9.982291 TTCAAGCAATTCACGAATATAGTTTAC 57.018 29.630 0.00 0.00 0.00 2.01
113 114 9.982291 GTTCAAGCAATTCACGAATATAGTTTA 57.018 29.630 0.00 0.00 0.00 2.01
114 115 8.511321 TGTTCAAGCAATTCACGAATATAGTTT 58.489 29.630 0.00 0.00 0.00 2.66
115 116 8.039603 TGTTCAAGCAATTCACGAATATAGTT 57.960 30.769 0.00 0.00 0.00 2.24
116 117 7.609760 TGTTCAAGCAATTCACGAATATAGT 57.390 32.000 0.00 0.00 0.00 2.12
117 118 9.162793 GAATGTTCAAGCAATTCACGAATATAG 57.837 33.333 0.00 0.00 0.00 1.31
118 119 8.672815 TGAATGTTCAAGCAATTCACGAATATA 58.327 29.630 0.00 0.00 33.55 0.86
119 120 7.537715 TGAATGTTCAAGCAATTCACGAATAT 58.462 30.769 0.00 0.00 33.55 1.28
120 121 6.907741 TGAATGTTCAAGCAATTCACGAATA 58.092 32.000 0.00 0.00 33.55 1.75
121 122 5.771469 TGAATGTTCAAGCAATTCACGAAT 58.229 33.333 0.00 0.00 33.55 3.34
122 123 5.180367 TGAATGTTCAAGCAATTCACGAA 57.820 34.783 0.00 0.00 33.55 3.85
123 124 4.827304 TGAATGTTCAAGCAATTCACGA 57.173 36.364 0.00 0.00 33.55 4.35
124 125 5.886715 TTTGAATGTTCAAGCAATTCACG 57.113 34.783 8.07 0.00 46.68 4.35
148 149 9.237187 TGGCACACAAATAGAATCTAAACATAA 57.763 29.630 0.00 0.00 0.00 1.90
149 150 8.800370 TGGCACACAAATAGAATCTAAACATA 57.200 30.769 0.00 0.00 0.00 2.29
150 151 7.701539 TGGCACACAAATAGAATCTAAACAT 57.298 32.000 0.00 0.00 0.00 2.71
151 152 7.517614 TTGGCACACAAATAGAATCTAAACA 57.482 32.000 0.00 0.00 39.29 2.83
154 155 9.407380 ACATATTGGCACACAAATAGAATCTAA 57.593 29.630 0.00 0.00 43.46 2.10
155 156 8.978874 ACATATTGGCACACAAATAGAATCTA 57.021 30.769 0.00 0.00 43.46 1.98
156 157 7.886629 ACATATTGGCACACAAATAGAATCT 57.113 32.000 0.00 0.00 43.46 2.40
159 160 9.800433 CAATTACATATTGGCACACAAATAGAA 57.200 29.630 0.00 0.00 43.46 2.10
160 161 7.920151 GCAATTACATATTGGCACACAAATAGA 59.080 33.333 0.00 0.00 43.46 1.98
161 162 7.705752 TGCAATTACATATTGGCACACAAATAG 59.294 33.333 0.00 0.00 43.46 1.73
162 163 7.550712 TGCAATTACATATTGGCACACAAATA 58.449 30.769 0.00 0.00 43.46 1.40
163 164 6.404708 TGCAATTACATATTGGCACACAAAT 58.595 32.000 0.00 0.00 43.46 2.32
164 165 5.787380 TGCAATTACATATTGGCACACAAA 58.213 33.333 0.00 0.00 43.46 2.83
165 166 5.397142 TGCAATTACATATTGGCACACAA 57.603 34.783 0.00 0.00 44.54 3.33
166 167 5.397142 TTGCAATTACATATTGGCACACA 57.603 34.783 0.00 0.00 39.29 3.72
167 168 5.811613 ACATTGCAATTACATATTGGCACAC 59.188 36.000 9.83 0.00 39.29 3.82
168 169 5.975282 ACATTGCAATTACATATTGGCACA 58.025 33.333 9.83 0.00 0.00 4.57
169 170 6.642131 CCTACATTGCAATTACATATTGGCAC 59.358 38.462 9.83 0.00 0.00 5.01
170 171 6.548993 TCCTACATTGCAATTACATATTGGCA 59.451 34.615 9.83 0.00 0.00 4.92
171 172 6.980593 TCCTACATTGCAATTACATATTGGC 58.019 36.000 9.83 0.00 0.00 4.52
172 173 8.169977 ACTCCTACATTGCAATTACATATTGG 57.830 34.615 9.83 4.22 0.00 3.16
181 182 9.632638 AACTCATTATACTCCTACATTGCAATT 57.367 29.630 9.83 4.36 0.00 2.32
182 183 9.060347 CAACTCATTATACTCCTACATTGCAAT 57.940 33.333 5.99 5.99 0.00 3.56
183 184 7.012327 GCAACTCATTATACTCCTACATTGCAA 59.988 37.037 0.00 0.00 37.92 4.08
184 185 6.483307 GCAACTCATTATACTCCTACATTGCA 59.517 38.462 0.00 0.00 37.92 4.08
185 186 6.346919 CGCAACTCATTATACTCCTACATTGC 60.347 42.308 0.00 0.00 35.40 3.56
186 187 6.146184 CCGCAACTCATTATACTCCTACATTG 59.854 42.308 0.00 0.00 0.00 2.82
187 188 6.041637 TCCGCAACTCATTATACTCCTACATT 59.958 38.462 0.00 0.00 0.00 2.71
188 189 5.538813 TCCGCAACTCATTATACTCCTACAT 59.461 40.000 0.00 0.00 0.00 2.29
189 190 4.891168 TCCGCAACTCATTATACTCCTACA 59.109 41.667 0.00 0.00 0.00 2.74
190 191 5.009811 ACTCCGCAACTCATTATACTCCTAC 59.990 44.000 0.00 0.00 0.00 3.18
191 192 5.138276 ACTCCGCAACTCATTATACTCCTA 58.862 41.667 0.00 0.00 0.00 2.94
192 193 3.961408 ACTCCGCAACTCATTATACTCCT 59.039 43.478 0.00 0.00 0.00 3.69
193 194 4.323553 ACTCCGCAACTCATTATACTCC 57.676 45.455 0.00 0.00 0.00 3.85
194 195 7.766219 TTAAACTCCGCAACTCATTATACTC 57.234 36.000 0.00 0.00 0.00 2.59
195 196 8.556213 TTTTAAACTCCGCAACTCATTATACT 57.444 30.769 0.00 0.00 0.00 2.12
236 237 8.755977 TCTATTTTGAAACGAAGGGAGTAGTAT 58.244 33.333 0.00 0.00 0.00 2.12
237 238 8.125978 TCTATTTTGAAACGAAGGGAGTAGTA 57.874 34.615 0.00 0.00 0.00 1.82
238 239 7.001099 TCTATTTTGAAACGAAGGGAGTAGT 57.999 36.000 0.00 0.00 0.00 2.73
239 240 9.595823 TTATCTATTTTGAAACGAAGGGAGTAG 57.404 33.333 0.00 0.00 0.00 2.57
240 241 9.374838 GTTATCTATTTTGAAACGAAGGGAGTA 57.625 33.333 0.00 0.00 0.00 2.59
241 242 7.336176 GGTTATCTATTTTGAAACGAAGGGAGT 59.664 37.037 0.00 0.00 0.00 3.85
242 243 7.201705 GGGTTATCTATTTTGAAACGAAGGGAG 60.202 40.741 0.00 0.00 0.00 4.30
243 244 6.600427 GGGTTATCTATTTTGAAACGAAGGGA 59.400 38.462 0.00 0.00 0.00 4.20
244 245 6.376018 TGGGTTATCTATTTTGAAACGAAGGG 59.624 38.462 0.00 0.00 0.00 3.95
245 246 7.385778 TGGGTTATCTATTTTGAAACGAAGG 57.614 36.000 0.00 0.00 0.00 3.46
246 247 8.512138 AGTTGGGTTATCTATTTTGAAACGAAG 58.488 33.333 0.00 0.00 0.00 3.79
247 248 8.398878 AGTTGGGTTATCTATTTTGAAACGAA 57.601 30.769 0.00 0.00 0.00 3.85
248 249 7.989416 AGTTGGGTTATCTATTTTGAAACGA 57.011 32.000 0.00 0.00 0.00 3.85
249 250 8.911662 CAAAGTTGGGTTATCTATTTTGAAACG 58.088 33.333 0.00 0.00 0.00 3.60
250 251 9.758651 ACAAAGTTGGGTTATCTATTTTGAAAC 57.241 29.630 0.00 0.00 0.00 2.78
253 254 9.802039 AGTACAAAGTTGGGTTATCTATTTTGA 57.198 29.630 0.00 0.00 0.00 2.69
260 261 8.491958 CCCTTATAGTACAAAGTTGGGTTATCT 58.508 37.037 0.00 0.00 0.00 1.98
261 262 8.488668 TCCCTTATAGTACAAAGTTGGGTTATC 58.511 37.037 0.00 0.00 34.14 1.75
262 263 8.396619 TCCCTTATAGTACAAAGTTGGGTTAT 57.603 34.615 0.00 0.00 34.14 1.89
263 264 7.811482 TCCCTTATAGTACAAAGTTGGGTTA 57.189 36.000 0.00 0.00 34.14 2.85
264 265 6.707273 TCCCTTATAGTACAAAGTTGGGTT 57.293 37.500 0.00 0.00 34.14 4.11
265 266 6.903340 ATCCCTTATAGTACAAAGTTGGGT 57.097 37.500 0.00 0.00 34.14 4.51
266 267 6.546034 CCAATCCCTTATAGTACAAAGTTGGG 59.454 42.308 0.00 0.00 29.35 4.12
267 268 7.116736 ACCAATCCCTTATAGTACAAAGTTGG 58.883 38.462 14.90 14.90 34.74 3.77
268 269 8.575649 AACCAATCCCTTATAGTACAAAGTTG 57.424 34.615 0.00 0.00 0.00 3.16
269 270 9.901172 CTAACCAATCCCTTATAGTACAAAGTT 57.099 33.333 0.00 0.00 0.00 2.66
270 271 8.491958 CCTAACCAATCCCTTATAGTACAAAGT 58.508 37.037 0.00 0.00 0.00 2.66
271 272 8.491958 ACCTAACCAATCCCTTATAGTACAAAG 58.508 37.037 0.00 0.00 0.00 2.77
272 273 8.396619 ACCTAACCAATCCCTTATAGTACAAA 57.603 34.615 0.00 0.00 0.00 2.83
273 274 7.071572 GGACCTAACCAATCCCTTATAGTACAA 59.928 40.741 0.00 0.00 0.00 2.41
274 275 6.556116 GGACCTAACCAATCCCTTATAGTACA 59.444 42.308 0.00 0.00 0.00 2.90
275 276 7.002250 GGACCTAACCAATCCCTTATAGTAC 57.998 44.000 0.00 0.00 0.00 2.73
285 286 1.153025 GGCGGGACCTAACCAATCC 60.153 63.158 0.00 0.00 34.51 3.01
286 287 0.034863 TTGGCGGGACCTAACCAATC 60.035 55.000 8.71 0.00 37.26 2.67
287 288 0.406361 TTTGGCGGGACCTAACCAAT 59.594 50.000 12.29 0.00 41.59 3.16
288 289 0.185416 TTTTGGCGGGACCTAACCAA 59.815 50.000 8.71 8.71 40.34 3.67
289 290 0.537828 GTTTTGGCGGGACCTAACCA 60.538 55.000 0.00 0.00 40.22 3.67
290 291 0.251033 AGTTTTGGCGGGACCTAACC 60.251 55.000 0.00 0.00 40.22 2.85
291 292 1.612676 AAGTTTTGGCGGGACCTAAC 58.387 50.000 0.00 0.00 40.22 2.34
292 293 1.957877 CAAAGTTTTGGCGGGACCTAA 59.042 47.619 0.00 0.00 40.22 2.69
293 294 1.611519 CAAAGTTTTGGCGGGACCTA 58.388 50.000 0.00 0.00 40.22 3.08
294 295 1.744320 GCAAAGTTTTGGCGGGACCT 61.744 55.000 6.72 0.00 40.22 3.85
295 296 1.300620 GCAAAGTTTTGGCGGGACC 60.301 57.895 6.72 0.00 38.57 4.46
296 297 0.179097 TTGCAAAGTTTTGGCGGGAC 60.179 50.000 0.00 0.00 38.57 4.46
297 298 0.179097 GTTGCAAAGTTTTGGCGGGA 60.179 50.000 0.00 0.00 38.57 5.14
298 299 0.179086 AGTTGCAAAGTTTTGGCGGG 60.179 50.000 0.00 0.00 38.57 6.13
299 300 1.208259 GAGTTGCAAAGTTTTGGCGG 58.792 50.000 0.00 0.00 38.57 6.13
300 301 1.854126 CTGAGTTGCAAAGTTTTGGCG 59.146 47.619 0.00 0.00 38.57 5.69
301 302 2.892374 ACTGAGTTGCAAAGTTTTGGC 58.108 42.857 0.00 0.00 38.57 4.52
302 303 6.099341 AGTTTACTGAGTTGCAAAGTTTTGG 58.901 36.000 7.54 0.00 38.57 3.28
303 304 6.253512 GGAGTTTACTGAGTTGCAAAGTTTTG 59.746 38.462 7.54 0.28 41.03 2.44
304 305 6.071616 TGGAGTTTACTGAGTTGCAAAGTTTT 60.072 34.615 7.54 0.00 0.00 2.43
305 306 5.417580 TGGAGTTTACTGAGTTGCAAAGTTT 59.582 36.000 7.54 0.00 0.00 2.66
306 307 4.947388 TGGAGTTTACTGAGTTGCAAAGTT 59.053 37.500 7.54 0.00 0.00 2.66
307 308 4.335594 GTGGAGTTTACTGAGTTGCAAAGT 59.664 41.667 0.00 3.82 0.00 2.66
308 309 4.261197 GGTGGAGTTTACTGAGTTGCAAAG 60.261 45.833 0.00 0.00 0.00 2.77
309 310 3.630312 GGTGGAGTTTACTGAGTTGCAAA 59.370 43.478 0.00 0.00 0.00 3.68
310 311 3.211045 GGTGGAGTTTACTGAGTTGCAA 58.789 45.455 0.00 0.00 0.00 4.08
311 312 2.805295 CGGTGGAGTTTACTGAGTTGCA 60.805 50.000 0.00 0.00 0.00 4.08
312 313 1.798813 CGGTGGAGTTTACTGAGTTGC 59.201 52.381 0.00 0.00 0.00 4.17
313 314 2.036733 TCCGGTGGAGTTTACTGAGTTG 59.963 50.000 0.00 0.00 0.00 3.16
314 315 2.322658 TCCGGTGGAGTTTACTGAGTT 58.677 47.619 0.00 0.00 0.00 3.01
315 316 2.005370 TCCGGTGGAGTTTACTGAGT 57.995 50.000 0.00 0.00 0.00 3.41
316 317 2.479730 CGATCCGGTGGAGTTTACTGAG 60.480 54.545 0.00 0.00 34.05 3.35
317 318 1.475280 CGATCCGGTGGAGTTTACTGA 59.525 52.381 0.00 0.00 34.05 3.41
318 319 1.203994 ACGATCCGGTGGAGTTTACTG 59.796 52.381 0.00 0.00 34.05 2.74
319 320 1.553706 ACGATCCGGTGGAGTTTACT 58.446 50.000 0.00 0.00 34.05 2.24
320 321 2.094338 AGAACGATCCGGTGGAGTTTAC 60.094 50.000 0.00 0.00 34.05 2.01
321 322 2.173519 AGAACGATCCGGTGGAGTTTA 58.826 47.619 0.00 0.00 34.05 2.01
322 323 0.974383 AGAACGATCCGGTGGAGTTT 59.026 50.000 0.00 0.00 34.05 2.66
323 324 0.974383 AAGAACGATCCGGTGGAGTT 59.026 50.000 0.00 4.13 34.05 3.01
324 325 0.974383 AAAGAACGATCCGGTGGAGT 59.026 50.000 0.00 0.00 34.05 3.85
325 326 2.953466 TAAAGAACGATCCGGTGGAG 57.047 50.000 0.00 0.00 34.05 3.86
326 327 3.899052 AATAAAGAACGATCCGGTGGA 57.101 42.857 0.00 0.00 35.55 4.02
327 328 5.107607 CGATAAATAAAGAACGATCCGGTGG 60.108 44.000 0.00 0.00 0.00 4.61
328 329 5.107607 CCGATAAATAAAGAACGATCCGGTG 60.108 44.000 0.00 0.00 0.00 4.94
329 330 4.986659 CCGATAAATAAAGAACGATCCGGT 59.013 41.667 0.00 0.00 0.00 5.28
330 331 4.387862 CCCGATAAATAAAGAACGATCCGG 59.612 45.833 0.00 0.00 0.00 5.14
331 332 5.224888 TCCCGATAAATAAAGAACGATCCG 58.775 41.667 0.00 0.00 0.00 4.18
332 333 7.411588 CGATTCCCGATAAATAAAGAACGATCC 60.412 40.741 0.00 0.00 41.76 3.36
333 334 7.115947 ACGATTCCCGATAAATAAAGAACGATC 59.884 37.037 0.00 0.00 41.76 3.69
334 335 6.927381 ACGATTCCCGATAAATAAAGAACGAT 59.073 34.615 0.00 0.00 41.76 3.73
335 336 6.275335 ACGATTCCCGATAAATAAAGAACGA 58.725 36.000 0.00 0.00 41.76 3.85
336 337 6.520792 ACGATTCCCGATAAATAAAGAACG 57.479 37.500 0.00 0.00 41.76 3.95
337 338 9.859692 CTAAACGATTCCCGATAAATAAAGAAC 57.140 33.333 0.00 0.00 41.76 3.01
338 339 9.820725 TCTAAACGATTCCCGATAAATAAAGAA 57.179 29.630 0.00 0.00 41.76 2.52
339 340 9.820725 TTCTAAACGATTCCCGATAAATAAAGA 57.179 29.630 0.00 0.00 41.76 2.52
343 344 8.500773 GCATTTCTAAACGATTCCCGATAAATA 58.499 33.333 0.00 0.00 41.76 1.40
344 345 7.360361 GCATTTCTAAACGATTCCCGATAAAT 58.640 34.615 0.00 0.00 41.76 1.40
345 346 6.238538 GGCATTTCTAAACGATTCCCGATAAA 60.239 38.462 0.00 0.00 41.76 1.40
346 347 5.237779 GGCATTTCTAAACGATTCCCGATAA 59.762 40.000 0.00 0.00 41.76 1.75
347 348 4.753107 GGCATTTCTAAACGATTCCCGATA 59.247 41.667 0.00 0.00 41.76 2.92
348 349 3.564225 GGCATTTCTAAACGATTCCCGAT 59.436 43.478 0.00 0.00 41.76 4.18
349 350 2.940410 GGCATTTCTAAACGATTCCCGA 59.060 45.455 0.00 0.00 41.76 5.14
350 351 2.680841 TGGCATTTCTAAACGATTCCCG 59.319 45.455 0.00 0.00 45.44 5.14
351 352 4.338118 TGATGGCATTTCTAAACGATTCCC 59.662 41.667 0.00 0.00 0.00 3.97
352 353 5.499139 TGATGGCATTTCTAAACGATTCC 57.501 39.130 0.00 0.00 0.00 3.01
353 354 6.498304 ACATGATGGCATTTCTAAACGATTC 58.502 36.000 0.00 0.00 30.68 2.52
354 355 6.455360 ACATGATGGCATTTCTAAACGATT 57.545 33.333 0.00 0.00 30.68 3.34
355 356 7.750229 ATACATGATGGCATTTCTAAACGAT 57.250 32.000 0.00 0.00 30.68 3.73
356 357 7.566760 AATACATGATGGCATTTCTAAACGA 57.433 32.000 0.00 0.00 30.68 3.85
391 392 9.472361 AGTCGCTCACATACGTAAAATTATTAT 57.528 29.630 0.00 0.00 0.00 1.28
392 393 8.861033 AGTCGCTCACATACGTAAAATTATTA 57.139 30.769 0.00 0.00 0.00 0.98
393 394 7.766219 AGTCGCTCACATACGTAAAATTATT 57.234 32.000 0.00 0.00 0.00 1.40
394 395 7.766219 AAGTCGCTCACATACGTAAAATTAT 57.234 32.000 0.00 0.00 0.00 1.28
395 396 7.585286 AAAGTCGCTCACATACGTAAAATTA 57.415 32.000 0.00 0.00 0.00 1.40
396 397 6.476243 AAAGTCGCTCACATACGTAAAATT 57.524 33.333 0.00 0.00 0.00 1.82
397 398 7.585286 TTAAAGTCGCTCACATACGTAAAAT 57.415 32.000 0.00 0.00 0.00 1.82
398 399 7.585286 ATTAAAGTCGCTCACATACGTAAAA 57.415 32.000 0.00 0.00 0.00 1.52
399 400 7.116662 ACAATTAAAGTCGCTCACATACGTAAA 59.883 33.333 0.00 0.00 0.00 2.01
400 401 6.587226 ACAATTAAAGTCGCTCACATACGTAA 59.413 34.615 0.00 0.00 0.00 3.18
401 402 6.034150 CACAATTAAAGTCGCTCACATACGTA 59.966 38.462 0.00 0.00 0.00 3.57
402 403 4.927425 ACAATTAAAGTCGCTCACATACGT 59.073 37.500 0.00 0.00 0.00 3.57
403 404 5.248087 CACAATTAAAGTCGCTCACATACG 58.752 41.667 0.00 0.00 0.00 3.06
404 405 5.022021 GCACAATTAAAGTCGCTCACATAC 58.978 41.667 0.00 0.00 0.00 2.39
405 406 4.935205 AGCACAATTAAAGTCGCTCACATA 59.065 37.500 0.00 0.00 0.00 2.29
406 407 3.753272 AGCACAATTAAAGTCGCTCACAT 59.247 39.130 0.00 0.00 0.00 3.21
409 410 3.058983 CACAGCACAATTAAAGTCGCTCA 60.059 43.478 0.00 0.00 0.00 4.26
442 443 3.254024 AACGCCCGTGCCTCTGAAT 62.254 57.895 0.00 0.00 0.00 2.57
443 444 3.876589 GAACGCCCGTGCCTCTGAA 62.877 63.158 0.00 0.00 0.00 3.02
444 445 4.373116 GAACGCCCGTGCCTCTGA 62.373 66.667 0.00 0.00 0.00 3.27
511 513 1.079543 CACTTCACCCCGAGCTCAG 60.080 63.158 15.40 1.32 0.00 3.35
517 519 2.863346 CGTGGACACTTCACCCCGA 61.863 63.158 0.56 0.00 0.00 5.14
619 626 0.994247 TGGTCTGGGCATTGATGTCT 59.006 50.000 0.00 0.00 31.84 3.41
625 632 0.393537 GAGGTCTGGTCTGGGCATTG 60.394 60.000 0.00 0.00 0.00 2.82
646 653 0.566679 GTAGGGTAGGGATGGGGAGT 59.433 60.000 0.00 0.00 0.00 3.85
650 657 1.173425 TAGGGTAGGGTAGGGATGGG 58.827 60.000 0.00 0.00 0.00 4.00
651 658 1.203275 GGTAGGGTAGGGTAGGGATGG 60.203 61.905 0.00 0.00 0.00 3.51
652 659 1.506418 TGGTAGGGTAGGGTAGGGATG 59.494 57.143 0.00 0.00 0.00 3.51
653 660 1.945786 TGGTAGGGTAGGGTAGGGAT 58.054 55.000 0.00 0.00 0.00 3.85
654 661 1.791402 GATGGTAGGGTAGGGTAGGGA 59.209 57.143 0.00 0.00 0.00 4.20
655 662 1.549493 CGATGGTAGGGTAGGGTAGGG 60.549 61.905 0.00 0.00 0.00 3.53
656 663 1.146566 ACGATGGTAGGGTAGGGTAGG 59.853 57.143 0.00 0.00 0.00 3.18
657 664 2.671896 ACGATGGTAGGGTAGGGTAG 57.328 55.000 0.00 0.00 0.00 3.18
658 665 2.224867 GCTACGATGGTAGGGTAGGGTA 60.225 54.545 15.67 0.00 45.15 3.69
659 666 1.480127 GCTACGATGGTAGGGTAGGGT 60.480 57.143 15.67 0.00 45.15 4.34
660 667 1.254954 GCTACGATGGTAGGGTAGGG 58.745 60.000 15.67 0.00 45.15 3.53
661 668 1.887198 CTGCTACGATGGTAGGGTAGG 59.113 57.143 15.67 0.00 45.15 3.18
662 669 1.269998 GCTGCTACGATGGTAGGGTAG 59.730 57.143 15.67 3.07 45.15 3.18
663 670 1.325355 GCTGCTACGATGGTAGGGTA 58.675 55.000 15.67 0.00 45.15 3.69
664 671 0.686441 TGCTGCTACGATGGTAGGGT 60.686 55.000 15.67 0.00 45.15 4.34
731 753 2.838202 GGAGTGTAGGGATTTGGAGACA 59.162 50.000 0.00 0.00 39.83 3.41
826 857 4.516321 TGACATGTGTGAAATTGGAGAGTG 59.484 41.667 1.15 0.00 0.00 3.51
835 866 3.624777 GAGGGGATGACATGTGTGAAAT 58.375 45.455 1.15 0.00 0.00 2.17
836 867 2.290896 GGAGGGGATGACATGTGTGAAA 60.291 50.000 1.15 0.00 0.00 2.69
837 868 1.281867 GGAGGGGATGACATGTGTGAA 59.718 52.381 1.15 0.00 0.00 3.18
838 869 0.911769 GGAGGGGATGACATGTGTGA 59.088 55.000 1.15 0.00 0.00 3.58
839 870 0.914644 AGGAGGGGATGACATGTGTG 59.085 55.000 1.15 0.00 0.00 3.82
840 871 1.207791 GAGGAGGGGATGACATGTGT 58.792 55.000 1.15 0.00 0.00 3.72
841 872 0.105593 CGAGGAGGGGATGACATGTG 59.894 60.000 1.15 0.00 0.00 3.21
842 873 1.690219 GCGAGGAGGGGATGACATGT 61.690 60.000 0.00 0.00 0.00 3.21
843 874 1.070445 GCGAGGAGGGGATGACATG 59.930 63.158 0.00 0.00 0.00 3.21
844 875 2.502492 CGCGAGGAGGGGATGACAT 61.502 63.158 0.00 0.00 0.00 3.06
845 876 3.147595 CGCGAGGAGGGGATGACA 61.148 66.667 0.00 0.00 0.00 3.58
857 888 2.161486 GCAGAGTTAGCACCGCGAG 61.161 63.158 8.23 0.00 0.00 5.03
858 889 2.126071 GCAGAGTTAGCACCGCGA 60.126 61.111 8.23 0.00 0.00 5.87
859 890 2.125912 AGCAGAGTTAGCACCGCG 60.126 61.111 0.00 0.00 0.00 6.46
860 891 0.456221 TAGAGCAGAGTTAGCACCGC 59.544 55.000 0.00 0.00 0.00 5.68
861 892 1.746220 ACTAGAGCAGAGTTAGCACCG 59.254 52.381 0.00 0.00 0.00 4.94
862 893 3.878160 AACTAGAGCAGAGTTAGCACC 57.122 47.619 0.00 0.00 35.36 5.01
863 894 5.125739 TCCTAAACTAGAGCAGAGTTAGCAC 59.874 44.000 0.00 0.00 36.10 4.40
864 895 5.262009 TCCTAAACTAGAGCAGAGTTAGCA 58.738 41.667 0.00 0.00 36.10 3.49
865 896 5.838531 TCCTAAACTAGAGCAGAGTTAGC 57.161 43.478 0.00 0.00 36.10 3.09
866 897 8.691797 AGAATTCCTAAACTAGAGCAGAGTTAG 58.308 37.037 0.65 0.00 36.10 2.34
867 898 8.470805 CAGAATTCCTAAACTAGAGCAGAGTTA 58.529 37.037 0.65 0.00 36.10 2.24
868 899 7.327214 CAGAATTCCTAAACTAGAGCAGAGTT 58.673 38.462 0.65 0.00 38.81 3.01
869 900 6.629291 GCAGAATTCCTAAACTAGAGCAGAGT 60.629 42.308 0.65 0.00 0.00 3.24
870 901 5.752955 GCAGAATTCCTAAACTAGAGCAGAG 59.247 44.000 0.65 0.00 0.00 3.35
871 902 5.423610 AGCAGAATTCCTAAACTAGAGCAGA 59.576 40.000 0.65 0.00 0.00 4.26
872 903 5.669477 AGCAGAATTCCTAAACTAGAGCAG 58.331 41.667 0.65 0.00 0.00 4.24
873 904 5.395768 GGAGCAGAATTCCTAAACTAGAGCA 60.396 44.000 0.65 0.00 0.00 4.26
874 905 5.053811 GGAGCAGAATTCCTAAACTAGAGC 58.946 45.833 0.65 0.00 0.00 4.09
875 906 6.127196 ACTGGAGCAGAATTCCTAAACTAGAG 60.127 42.308 0.65 0.00 35.67 2.43
876 907 5.721960 ACTGGAGCAGAATTCCTAAACTAGA 59.278 40.000 0.65 0.00 35.67 2.43
877 908 5.983540 ACTGGAGCAGAATTCCTAAACTAG 58.016 41.667 0.65 1.17 35.67 2.57
878 909 5.721960 AGACTGGAGCAGAATTCCTAAACTA 59.278 40.000 0.65 0.00 35.67 2.24
879 910 4.534103 AGACTGGAGCAGAATTCCTAAACT 59.466 41.667 0.65 0.00 35.67 2.66
880 911 4.837972 AGACTGGAGCAGAATTCCTAAAC 58.162 43.478 0.65 0.00 35.67 2.01
881 912 4.080863 GGAGACTGGAGCAGAATTCCTAAA 60.081 45.833 0.65 0.00 35.67 1.85
882 913 3.452627 GGAGACTGGAGCAGAATTCCTAA 59.547 47.826 0.65 0.00 35.67 2.69
883 914 3.034635 GGAGACTGGAGCAGAATTCCTA 58.965 50.000 0.65 0.00 35.67 2.94
884 915 1.836802 GGAGACTGGAGCAGAATTCCT 59.163 52.381 0.65 0.00 35.67 3.36
885 916 1.556911 TGGAGACTGGAGCAGAATTCC 59.443 52.381 0.65 0.00 35.18 3.01
886 917 3.557228 ATGGAGACTGGAGCAGAATTC 57.443 47.619 0.00 0.00 35.18 2.17
887 918 4.015084 CAAATGGAGACTGGAGCAGAATT 58.985 43.478 0.00 0.00 35.18 2.17
888 919 3.618351 CAAATGGAGACTGGAGCAGAAT 58.382 45.455 0.00 0.00 35.18 2.40
889 920 2.290514 CCAAATGGAGACTGGAGCAGAA 60.291 50.000 0.00 0.00 37.39 3.02
890 921 1.280133 CCAAATGGAGACTGGAGCAGA 59.720 52.381 0.00 0.00 37.39 4.26
891 922 1.747709 CCAAATGGAGACTGGAGCAG 58.252 55.000 0.00 0.00 37.39 4.24
892 923 0.322816 GCCAAATGGAGACTGGAGCA 60.323 55.000 2.98 0.00 37.39 4.26
893 924 0.322816 TGCCAAATGGAGACTGGAGC 60.323 55.000 2.98 0.00 37.39 4.70
894 925 2.092538 AGATGCCAAATGGAGACTGGAG 60.093 50.000 2.98 0.00 37.39 3.86
895 926 1.918262 AGATGCCAAATGGAGACTGGA 59.082 47.619 2.98 0.00 37.39 3.86
896 927 2.295885 GAGATGCCAAATGGAGACTGG 58.704 52.381 2.98 0.00 37.39 4.00
897 928 1.938577 CGAGATGCCAAATGGAGACTG 59.061 52.381 2.98 0.00 37.39 3.51
898 929 1.556911 ACGAGATGCCAAATGGAGACT 59.443 47.619 2.98 0.00 37.39 3.24
899 930 1.667724 CACGAGATGCCAAATGGAGAC 59.332 52.381 2.98 0.00 37.39 3.36
900 931 2.028420 CACGAGATGCCAAATGGAGA 57.972 50.000 2.98 0.00 37.39 3.71
911 942 3.699067 GGGAATGAATTTGCACGAGATG 58.301 45.455 0.00 0.00 0.00 2.90
936 967 2.472695 TTGCGCAGGACTACAGAAAT 57.527 45.000 11.31 0.00 0.00 2.17
937 968 1.871039 GTTTGCGCAGGACTACAGAAA 59.129 47.619 11.31 0.00 0.00 2.52
938 969 1.508632 GTTTGCGCAGGACTACAGAA 58.491 50.000 11.31 0.00 0.00 3.02
939 970 0.320421 GGTTTGCGCAGGACTACAGA 60.320 55.000 20.64 0.00 0.00 3.41
940 971 0.602638 TGGTTTGCGCAGGACTACAG 60.603 55.000 20.64 0.00 0.00 2.74
941 972 0.179043 TTGGTTTGCGCAGGACTACA 60.179 50.000 20.64 11.52 0.00 2.74
942 973 0.517316 CTTGGTTTGCGCAGGACTAC 59.483 55.000 20.64 11.41 0.00 2.73
943 974 1.234615 GCTTGGTTTGCGCAGGACTA 61.235 55.000 20.64 14.66 0.00 2.59
944 975 2.555547 GCTTGGTTTGCGCAGGACT 61.556 57.895 20.64 0.00 0.00 3.85
945 976 1.234615 TAGCTTGGTTTGCGCAGGAC 61.235 55.000 11.31 13.77 35.28 3.85
946 977 0.536233 TTAGCTTGGTTTGCGCAGGA 60.536 50.000 11.31 0.00 35.28 3.86
947 978 0.387239 GTTAGCTTGGTTTGCGCAGG 60.387 55.000 11.31 0.00 35.28 4.85
948 979 0.387239 GGTTAGCTTGGTTTGCGCAG 60.387 55.000 11.31 0.00 35.28 5.18
949 980 1.657556 GGTTAGCTTGGTTTGCGCA 59.342 52.632 5.66 5.66 35.28 6.09
950 981 1.442017 CGGTTAGCTTGGTTTGCGC 60.442 57.895 0.00 0.00 35.28 6.09
951 982 0.589223 TTCGGTTAGCTTGGTTTGCG 59.411 50.000 0.00 0.00 35.28 4.85
952 983 1.666023 GCTTCGGTTAGCTTGGTTTGC 60.666 52.381 0.00 0.00 38.15 3.68
953 984 1.068541 GGCTTCGGTTAGCTTGGTTTG 60.069 52.381 0.00 0.00 40.99 2.93
954 985 1.244816 GGCTTCGGTTAGCTTGGTTT 58.755 50.000 0.00 0.00 40.99 3.27
955 986 0.608308 GGGCTTCGGTTAGCTTGGTT 60.608 55.000 0.00 0.00 40.99 3.67
956 987 1.002502 GGGCTTCGGTTAGCTTGGT 60.003 57.895 0.00 0.00 40.99 3.67
957 988 1.749258 GGGGCTTCGGTTAGCTTGG 60.749 63.158 0.00 0.00 40.99 3.61
958 989 2.106683 CGGGGCTTCGGTTAGCTTG 61.107 63.158 0.00 0.00 40.99 4.01
959 990 2.267961 CGGGGCTTCGGTTAGCTT 59.732 61.111 0.00 0.00 40.99 3.74
985 1016 0.824109 TCCATCTGCTGTAACGAGGG 59.176 55.000 0.00 0.00 0.00 4.30
990 1021 0.811616 CCGGCTCCATCTGCTGTAAC 60.812 60.000 0.00 0.00 35.20 2.50
995 1026 2.685017 TCACCGGCTCCATCTGCT 60.685 61.111 0.00 0.00 0.00 4.24
997 1028 2.202987 GCTCACCGGCTCCATCTG 60.203 66.667 0.00 0.00 0.00 2.90
1091 1132 4.047059 GGGCCTCGACGTCGTCAA 62.047 66.667 34.40 17.08 40.80 3.18
1183 1224 2.587194 CTCCTTCATCCAGCGCCG 60.587 66.667 2.29 0.00 0.00 6.46
1234 1275 2.625790 GAGGGAGCATGAACTCGTCTAT 59.374 50.000 0.00 0.00 37.57 1.98
1273 1314 4.341806 AGAGAAGACATCTGAGGCAGTATG 59.658 45.833 0.00 0.00 38.96 2.39
1303 1350 1.059584 TCCCTCAACCAGGTGCTGAA 61.060 55.000 0.00 0.00 41.51 3.02
1386 1439 2.762006 GATCCTCTGCCTCGATGCCG 62.762 65.000 10.31 3.95 37.07 5.69
1387 1440 1.005156 GATCCTCTGCCTCGATGCC 60.005 63.158 10.31 0.00 0.00 4.40
1388 1441 1.005156 GGATCCTCTGCCTCGATGC 60.005 63.158 3.84 5.65 0.00 3.91
1389 1442 1.670590 GGGATCCTCTGCCTCGATG 59.329 63.158 12.58 0.00 31.26 3.84
1390 1443 1.535202 GGGGATCCTCTGCCTCGAT 60.535 63.158 12.58 0.00 35.23 3.59
1420 1476 2.417379 GCTCACGCATCTCCTTGTAGAA 60.417 50.000 0.00 0.00 35.78 2.10
1458 1514 3.575351 GACGAGTTCAGCAGCGGGT 62.575 63.158 0.00 0.00 0.00 5.28
1483 1539 1.198759 TTCTTCCCTCCCCCGTTCAG 61.199 60.000 0.00 0.00 0.00 3.02
1501 1557 0.779997 ATGGAAACCACCTCCAGCTT 59.220 50.000 0.00 0.00 46.04 3.74
1504 1560 0.324943 ACGATGGAAACCACCTCCAG 59.675 55.000 0.00 0.00 46.04 3.86
1590 1646 1.515736 GACGAAAGCCCGGTACTCG 60.516 63.158 0.00 5.81 38.88 4.18
1622 1678 2.660258 AAGTGCCACCACACGAGGTC 62.660 60.000 0.00 0.00 45.45 3.85
1628 1684 0.385390 CCTCAAAAGTGCCACCACAC 59.615 55.000 0.00 0.00 44.53 3.82
1639 1695 1.399791 GCTGCGAATCTCCCTCAAAAG 59.600 52.381 0.00 0.00 0.00 2.27
1650 1706 3.190878 CCCAGTTGGCTGCGAATC 58.809 61.111 0.00 0.00 41.26 2.52
1668 1724 1.901591 AGGTTTGGTCATGCTCACAG 58.098 50.000 0.00 0.00 0.00 3.66
1675 1731 2.816087 CCTCAGTGAAGGTTTGGTCATG 59.184 50.000 0.00 0.00 0.00 3.07
1689 1745 0.935898 GCGATTGCTCATCCTCAGTG 59.064 55.000 0.00 0.00 38.39 3.66
1734 1790 4.382362 GGCGTACTGTACCTTTTATCCTGT 60.382 45.833 12.08 0.00 0.00 4.00
1750 1806 5.138276 TCCTATTATCTGAACTGGCGTACT 58.862 41.667 0.00 0.00 0.00 2.73
1782 1845 4.277672 GGGGAAGAACACAACCTCTAAAAC 59.722 45.833 0.00 0.00 0.00 2.43
1788 1851 1.133915 TGTGGGGAAGAACACAACCTC 60.134 52.381 0.00 0.00 43.91 3.85
1790 1853 1.318576 CTGTGGGGAAGAACACAACC 58.681 55.000 0.00 0.00 45.87 3.77
1889 1959 4.037565 TCTCGTGTCGCTGGAACATATATT 59.962 41.667 0.00 0.00 38.20 1.28
1933 2003 9.381033 CGCCTATATCTCTAGCTAGTAAGTAAA 57.619 37.037 20.10 0.00 0.00 2.01
1934 2004 7.986320 CCGCCTATATCTCTAGCTAGTAAGTAA 59.014 40.741 20.10 5.12 0.00 2.24
1935 2005 7.344093 TCCGCCTATATCTCTAGCTAGTAAGTA 59.656 40.741 20.10 9.77 0.00 2.24
1937 2007 6.584488 TCCGCCTATATCTCTAGCTAGTAAG 58.416 44.000 20.10 11.45 0.00 2.34
2016 2086 7.455058 TGTACTATTGGAAAACATGGTAGTGT 58.545 34.615 0.00 0.00 0.00 3.55
2031 2101 6.395426 ACATTGGCATGAATGTACTATTGG 57.605 37.500 10.24 0.00 43.32 3.16
2032 2102 9.970395 ATTAACATTGGCATGAATGTACTATTG 57.030 29.630 11.87 0.00 44.15 1.90
2039 2109 8.670135 CATCAAAATTAACATTGGCATGAATGT 58.330 29.630 6.89 6.89 46.35 2.71
2091 2163 5.625311 GCAAATTTAGTGTGCAGTTCAGTAC 59.375 40.000 0.00 0.00 38.19 2.73
2093 2165 4.339247 AGCAAATTTAGTGTGCAGTTCAGT 59.661 37.500 2.16 0.00 40.83 3.41
2096 2168 4.022849 AGGAGCAAATTTAGTGTGCAGTTC 60.023 41.667 2.16 0.00 40.83 3.01
2097 2169 3.891366 AGGAGCAAATTTAGTGTGCAGTT 59.109 39.130 2.16 0.00 40.83 3.16
2106 2178 5.125100 TGCTGAAACAGGAGCAAATTTAG 57.875 39.130 0.00 0.00 42.22 1.85
2113 2185 2.928801 TACTTGCTGAAACAGGAGCA 57.071 45.000 0.00 0.00 43.47 4.26
2380 2455 6.624352 ATGTCAATACCATGCTACAATCAC 57.376 37.500 0.00 0.00 0.00 3.06
2381 2456 6.459985 GCAATGTCAATACCATGCTACAATCA 60.460 38.462 0.00 0.00 34.85 2.57
2391 2466 7.279090 CACATGATTTTGCAATGTCAATACCAT 59.721 33.333 15.51 4.78 0.00 3.55
2394 2469 6.455913 GGCACATGATTTTGCAATGTCAATAC 60.456 38.462 15.51 7.90 40.75 1.89
2396 2471 4.393680 GGCACATGATTTTGCAATGTCAAT 59.606 37.500 15.51 6.15 40.75 2.57
2453 2528 9.897040 ACCCTTAATAATATCCCATGTTTGAAT 57.103 29.630 0.00 0.00 0.00 2.57
2518 2593 4.266976 GCTACTTCATGTATACGCGTTGTT 59.733 41.667 20.78 5.57 0.00 2.83
2548 2623 1.252215 CCCCACATGATGCACTGCAA 61.252 55.000 8.03 0.00 43.62 4.08
2580 2655 1.822990 CGGTACTGAGAGGGCTTAACA 59.177 52.381 0.00 0.00 0.00 2.41
2642 2717 2.045926 GGACGGGCATTGCTCACT 60.046 61.111 9.60 0.00 0.00 3.41
2665 2740 7.498900 TGCAAGATCTTGTCAGAAACTCTTTTA 59.501 33.333 30.88 5.74 42.31 1.52
2692 2767 0.831711 GGGGCAGACCACCACATTTT 60.832 55.000 0.00 0.00 42.91 1.82
2737 2812 2.439338 TGCGTGTTGGCAACCAGT 60.439 55.556 26.31 0.00 40.59 4.00
2788 2863 0.991146 TGCTTCCAAGTCCATGCCTA 59.009 50.000 0.00 0.00 0.00 3.93
2845 2920 5.627968 GCAAGGAGTAAGATCAAAGTAGCCT 60.628 44.000 0.00 0.00 0.00 4.58
2863 2938 3.025978 CAGGCATGATTTTAGGCAAGGA 58.974 45.455 0.00 0.00 0.00 3.36
2878 2953 1.352352 ACACTGAGGTAAAGCAGGCAT 59.648 47.619 0.00 0.00 36.47 4.40
2890 2965 2.840651 ACCTTCTGGGAATACACTGAGG 59.159 50.000 0.00 0.00 38.76 3.86
2905 2980 6.814954 TCCTTCTTGATAGCATAACCTTCT 57.185 37.500 0.00 0.00 0.00 2.85
2995 3070 3.997021 CGTTAAAACACCTCTCTGCTGAT 59.003 43.478 0.00 0.00 0.00 2.90
3000 3075 3.654414 AGCTCGTTAAAACACCTCTCTG 58.346 45.455 0.00 0.00 0.00 3.35
3064 3139 0.951040 GACAGCTTTCCACCTCACCG 60.951 60.000 0.00 0.00 0.00 4.94
3113 3188 5.850557 TTGTCTTTGTTTGACATGGACAT 57.149 34.783 13.32 0.00 42.95 3.06
3115 3190 7.064490 ACAAAATTGTCTTTGTTTGACATGGAC 59.936 33.333 0.00 0.00 45.10 4.02
3148 3223 5.014202 GGATTTACACCAGGTACACCAATT 58.986 41.667 0.38 0.00 38.89 2.32
3214 3289 9.466497 AAAATAAGATCTGCTGGAATTTCACTA 57.534 29.630 0.00 0.00 0.00 2.74
3272 3347 5.088680 AGGGATGGCATTTTAACACAATG 57.911 39.130 0.00 0.00 35.12 2.82
3273 3348 5.025453 AGAGGGATGGCATTTTAACACAAT 58.975 37.500 0.00 0.00 0.00 2.71
3297 3372 0.937304 GCGCAAGTGTCTGAACTTCA 59.063 50.000 0.30 0.00 38.34 3.02
3316 3391 7.039082 TCCCCAGAACCTTCAAAATCTAAAATG 60.039 37.037 0.00 0.00 0.00 2.32
3326 3401 3.977999 TCTACTTCCCCAGAACCTTCAAA 59.022 43.478 0.00 0.00 0.00 2.69
3328 3403 3.269592 TCTACTTCCCCAGAACCTTCA 57.730 47.619 0.00 0.00 0.00 3.02
3375 3450 3.708631 CAGGTACTTCAGATGGACCAGAT 59.291 47.826 18.09 0.00 34.60 2.90
3388 3463 2.563179 TGACTTGAGCCTCAGGTACTTC 59.437 50.000 9.70 0.00 36.79 3.01
3450 3525 4.747108 CGCATATCTCAAGTAACTCCAAGG 59.253 45.833 0.00 0.00 0.00 3.61
3459 3534 6.143919 CGCATTACTTTCGCATATCTCAAGTA 59.856 38.462 0.00 0.00 0.00 2.24
3478 3553 5.414144 TGATGGAATTTCAGTTGTCGCATTA 59.586 36.000 0.00 0.00 0.00 1.90
3517 3592 6.088016 ACAACTAGACGTACCAATTGTGTA 57.912 37.500 4.43 3.88 0.00 2.90
3624 3699 1.403679 CTTGCCGAACAAAGTTGGTCA 59.596 47.619 9.62 0.00 45.07 4.02
3742 3817 1.686052 GCTCTGCCTAGCTGACATACT 59.314 52.381 0.00 0.00 39.50 2.12
3743 3818 1.410517 TGCTCTGCCTAGCTGACATAC 59.589 52.381 0.00 0.00 43.19 2.39
3750 3825 0.695347 AAGGTTTGCTCTGCCTAGCT 59.305 50.000 8.64 0.00 43.19 3.32
3758 3833 4.757149 GTGTAGAACATGAAGGTTTGCTCT 59.243 41.667 0.00 0.00 0.00 4.09
3840 3915 1.749634 CGACAAGTTCCCGGAGACTAT 59.250 52.381 0.73 0.00 0.00 2.12
3880 3955 1.888512 CCAACCCATCTTGGAACACTG 59.111 52.381 0.00 0.00 43.19 3.66
3896 3971 1.604278 GAGGTTGACAAGTGAGCCAAC 59.396 52.381 0.00 0.00 38.42 3.77
3925 4000 2.257409 CTTCCCACATAGGCACCGCT 62.257 60.000 0.00 0.00 35.39 5.52
3931 4006 0.395724 CCCCAACTTCCCACATAGGC 60.396 60.000 0.00 0.00 35.39 3.93
3991 4066 3.538591 CAATGCAGTGAGGCTAAGATGA 58.461 45.455 8.85 0.00 34.04 2.92
4010 4085 2.291209 TCTTTTGATCCAGCTGCCAA 57.709 45.000 8.66 9.14 0.00 4.52
4021 4096 2.303022 TCTGAGACGCCCTTCTTTTGAT 59.697 45.455 0.00 0.00 0.00 2.57
4036 4111 0.687354 GGCTTTGGGTGACTCTGAGA 59.313 55.000 12.44 0.00 0.00 3.27
4039 4114 1.171308 CATGGCTTTGGGTGACTCTG 58.829 55.000 0.00 0.00 0.00 3.35
4042 4117 4.850193 CCATGGCTTTGGGTGACT 57.150 55.556 0.00 0.00 32.80 3.41
4073 4148 1.134907 TCCGCCGATCCAGAAACTTAC 60.135 52.381 0.00 0.00 0.00 2.34
4075 4150 0.108138 CTCCGCCGATCCAGAAACTT 60.108 55.000 0.00 0.00 0.00 2.66
4077 4152 0.108329 TTCTCCGCCGATCCAGAAAC 60.108 55.000 0.00 0.00 0.00 2.78
4082 4157 1.379977 ACTCTTCTCCGCCGATCCA 60.380 57.895 0.00 0.00 0.00 3.41
4083 4158 1.066587 CACTCTTCTCCGCCGATCC 59.933 63.158 0.00 0.00 0.00 3.36
4108 4183 2.963101 ACCAGCTTCAAAAACTAACCCC 59.037 45.455 0.00 0.00 0.00 4.95
4171 4246 5.141182 TCAGTCACAGAACTAGTTTCCTCT 58.859 41.667 10.02 0.00 34.32 3.69
4198 4273 3.120580 GCTTGATGCCAAAATCAAAACCG 60.121 43.478 1.69 0.00 43.97 4.44
4290 4365 2.447408 AATGCATCTCTCCATGGCAA 57.553 45.000 6.96 0.00 38.08 4.52
4309 4384 0.108520 GACGGTTGGGATGCTCGTTA 60.109 55.000 0.00 0.00 34.06 3.18
4315 4390 2.750237 GTGGGACGGTTGGGATGC 60.750 66.667 0.00 0.00 0.00 3.91
4369 4444 5.478332 GTGTCAAATCTTTGGAAGAGGGAAT 59.522 40.000 3.02 0.00 41.61 3.01
4430 4505 8.250332 GGAATGAGATATTGTGAGAGGATAGAC 58.750 40.741 0.00 0.00 0.00 2.59
4499 4575 2.113807 TGAGCAGGTGCATCTATCAGT 58.886 47.619 0.00 0.00 45.16 3.41
4507 4586 0.391661 CTAACCGTGAGCAGGTGCAT 60.392 55.000 4.48 0.00 41.95 3.96
4521 4600 3.181493 CCATCTTGTTGCTCATGCTAACC 60.181 47.826 0.00 0.00 40.48 2.85
4564 4643 1.268899 CTGCTCTTGGCTTTTCAGTGG 59.731 52.381 0.00 0.00 42.39 4.00
4634 4713 9.912634 CTTTTCTTGCAATAAACTTTGGATAGA 57.087 29.630 9.30 0.00 0.00 1.98
4660 4740 9.736023 ATGTCTAGAAACATTTCAAGAAAACAC 57.264 29.630 7.10 0.00 36.47 3.32
4745 4898 7.483691 GTCACTTGTTCACTTTAACGAAACAAT 59.516 33.333 13.45 6.18 31.76 2.71
4752 4905 5.163893 ACAGTGTCACTTGTTCACTTTAACG 60.164 40.000 1.67 0.00 39.89 3.18
4763 4916 7.448748 AAGAAAGTTTTACAGTGTCACTTGT 57.551 32.000 1.67 7.89 0.00 3.16
4849 5050 3.561503 GTCGGCAGGAACATACAAAAAC 58.438 45.455 0.00 0.00 0.00 2.43
4880 5082 2.825836 CGCCTGACAAGGGATGGC 60.826 66.667 0.00 0.00 44.67 4.40
4881 5083 2.124570 CCGCCTGACAAGGGATGG 60.125 66.667 0.00 0.00 44.67 3.51
4882 5084 2.825836 GCCGCCTGACAAGGGATG 60.826 66.667 0.00 0.00 44.67 3.51
4883 5085 3.329889 TGCCGCCTGACAAGGGAT 61.330 61.111 0.00 0.00 44.67 3.85
4884 5086 4.329545 GTGCCGCCTGACAAGGGA 62.330 66.667 0.00 0.00 44.67 4.20
4991 5194 4.394712 CTCCGCCCGCTTCCTTGT 62.395 66.667 0.00 0.00 0.00 3.16
5222 5425 5.105635 CCACAGCTCAAATCCACACAATATT 60.106 40.000 0.00 0.00 0.00 1.28
5247 5450 3.378427 GGTTATCCCTCATTTGTCTGTGC 59.622 47.826 0.00 0.00 0.00 4.57
5274 5477 1.182385 GGACGGCTATCTCCTCCTGG 61.182 65.000 0.00 0.00 0.00 4.45
5275 5478 1.519751 CGGACGGCTATCTCCTCCTG 61.520 65.000 0.00 0.00 0.00 3.86
5321 5524 1.495951 CTTTGCGACGCTTGGGTAC 59.504 57.895 22.08 0.00 0.00 3.34
5330 5533 1.300620 TGACTCACCCTTTGCGACG 60.301 57.895 0.00 0.00 0.00 5.12
5334 5537 4.456806 ACGTGACTCACCCTTTGC 57.543 55.556 3.50 0.00 0.00 3.68


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.