Multiple sequence alignment - TraesCS7B01G315000

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G315000 chr7B 100.000 5031 0 0 903 5933 562743387 562738357 0.000000e+00 9291
1 TraesCS7B01G315000 chr7B 100.000 454 0 0 1 454 562744289 562743836 0.000000e+00 839
2 TraesCS7B01G315000 chr7D 96.204 2529 54 19 906 3418 526189523 526187021 0.000000e+00 4100
3 TraesCS7B01G315000 chr7D 94.268 2076 84 22 3429 5481 526186909 526184846 0.000000e+00 3142
4 TraesCS7B01G315000 chr7D 88.684 380 22 12 1 369 526240273 526239904 1.520000e-120 444
5 TraesCS7B01G315000 chr7D 95.455 110 5 0 5471 5580 1944630 1944739 6.110000e-40 176
6 TraesCS7B01G315000 chr7D 79.457 258 20 16 5690 5926 526184768 526184523 1.030000e-32 152
7 TraesCS7B01G315000 chr7A 92.452 2186 115 23 905 3072 606559145 606556992 0.000000e+00 3077
8 TraesCS7B01G315000 chr7A 90.936 2063 116 24 3429 5475 606552098 606550091 0.000000e+00 2708
9 TraesCS7B01G315000 chr7A 87.368 475 34 21 1 454 606560117 606559648 6.810000e-144 521
10 TraesCS7B01G315000 chr7A 94.492 236 13 0 3183 3418 606552443 606552208 1.220000e-96 364
11 TraesCS7B01G315000 chr3A 95.455 110 5 0 5471 5580 405503663 405503772 6.110000e-40 176
12 TraesCS7B01G315000 chr6B 93.220 118 8 0 5470 5587 591265486 591265603 2.200000e-39 174
13 TraesCS7B01G315000 chr2A 94.643 112 6 0 5471 5582 16546936 16547047 2.200000e-39 174
14 TraesCS7B01G315000 chr6A 94.595 111 6 0 5473 5583 106923553 106923443 7.910000e-39 172
15 TraesCS7B01G315000 chr5D 93.860 114 6 1 5470 5582 544700496 544700383 2.840000e-38 171
16 TraesCS7B01G315000 chr5A 93.805 113 7 0 5471 5583 315331383 315331271 2.840000e-38 171
17 TraesCS7B01G315000 chr3B 93.805 113 7 0 5471 5583 665983608 665983720 2.840000e-38 171
18 TraesCS7B01G315000 chr4B 91.453 117 10 0 5467 5583 628505153 628505269 1.710000e-35 161


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G315000 chr7B 562738357 562744289 5932 True 5065.000000 9291 100.000000 1 5933 2 chr7B.!!$R1 5932
1 TraesCS7B01G315000 chr7D 526184523 526189523 5000 True 2464.666667 4100 89.976333 906 5926 3 chr7D.!!$R2 5020
2 TraesCS7B01G315000 chr7A 606556992 606560117 3125 True 1799.000000 3077 89.910000 1 3072 2 chr7A.!!$R2 3071
3 TraesCS7B01G315000 chr7A 606550091 606552443 2352 True 1536.000000 2708 92.714000 3183 5475 2 chr7A.!!$R1 2292

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
157 158 0.458025 CGTCCCCTACAAGCTCGTTC 60.458 60.000 0.00 0.0 0.00 3.95 F
1084 1170 0.318445 CTCAAACCAACAGCAGCAGC 60.318 55.000 0.00 0.0 42.56 5.25 F
1086 1172 0.596600 CAAACCAACAGCAGCAGCAG 60.597 55.000 3.17 0.0 45.49 4.24 F
1191 1280 0.746063 CCCAACAGTTTCAGCAGCAA 59.254 50.000 0.00 0.0 0.00 3.91 F
2551 2660 1.654105 CTGTTAGTAGTCGGCGCTTTG 59.346 52.381 7.64 0.0 0.00 2.77 F
3425 3537 0.909623 AACCAGGAACGGGGTCATAG 59.090 55.000 0.00 0.0 42.51 2.23 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1176 1265 0.383231 GCTGTTGCTGCTGAAACTGT 59.617 50.000 18.45 0.00 34.36 3.55 R
2104 2206 0.465705 CACGGGCATAGACCATGTCT 59.534 55.000 1.94 1.94 45.54 3.41 R
2990 3102 0.519519 TTTCGCTGTACCCATTTGCG 59.480 50.000 0.00 0.00 46.71 4.85 R
3013 3125 2.517959 TCAACAGGCCTTTCATCTTGG 58.482 47.619 0.00 0.00 0.00 3.61 R
3628 3842 4.102210 TGCAGATCTCCTAAAGAAGGGATG 59.898 45.833 0.00 0.00 46.55 3.51 R
5218 5449 0.606096 ATAAACGGGGGCAAGCAAAC 59.394 50.000 0.00 0.00 0.00 2.93 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 2.190578 GGGCCTCCGGACATTGAG 59.809 66.667 0.00 0.00 27.52 3.02
146 147 3.766691 GCGCCTTGTCGTCCCCTA 61.767 66.667 0.00 0.00 0.00 3.53
149 150 1.675219 GCCTTGTCGTCCCCTACAA 59.325 57.895 0.00 0.00 34.57 2.41
152 153 0.608640 CTTGTCGTCCCCTACAAGCT 59.391 55.000 2.60 0.00 44.23 3.74
153 154 0.606604 TTGTCGTCCCCTACAAGCTC 59.393 55.000 0.00 0.00 32.11 4.09
154 155 1.139095 GTCGTCCCCTACAAGCTCG 59.861 63.158 0.00 0.00 0.00 5.03
155 156 1.303888 TCGTCCCCTACAAGCTCGT 60.304 57.895 0.00 0.00 0.00 4.18
156 157 0.896940 TCGTCCCCTACAAGCTCGTT 60.897 55.000 0.00 0.00 0.00 3.85
157 158 0.458025 CGTCCCCTACAAGCTCGTTC 60.458 60.000 0.00 0.00 0.00 3.95
158 159 0.458025 GTCCCCTACAAGCTCGTTCG 60.458 60.000 0.00 0.00 0.00 3.95
159 160 0.609957 TCCCCTACAAGCTCGTTCGA 60.610 55.000 0.00 0.00 0.00 3.71
160 161 0.460311 CCCCTACAAGCTCGTTCGAT 59.540 55.000 0.00 0.00 0.00 3.59
175 176 3.737972 CGTTCGATCACCTCCATCATCAA 60.738 47.826 0.00 0.00 0.00 2.57
176 177 3.459232 TCGATCACCTCCATCATCAAC 57.541 47.619 0.00 0.00 0.00 3.18
178 179 3.129109 CGATCACCTCCATCATCAACTG 58.871 50.000 0.00 0.00 0.00 3.16
180 181 4.502777 CGATCACCTCCATCATCAACTGAT 60.503 45.833 0.00 0.00 45.78 2.90
182 183 5.955961 TCACCTCCATCATCAACTGATTA 57.044 39.130 0.00 0.00 42.07 1.75
183 184 6.505048 TCACCTCCATCATCAACTGATTAT 57.495 37.500 0.00 0.00 42.07 1.28
186 187 8.098912 TCACCTCCATCATCAACTGATTATATG 58.901 37.037 0.00 0.00 42.07 1.78
193 194 6.829849 TCATCAACTGATTATATGCCTGTGA 58.170 36.000 0.00 0.00 31.21 3.58
200 201 3.574354 TTATATGCCTGTGATGTGCCA 57.426 42.857 0.00 0.00 0.00 4.92
201 202 2.670019 ATATGCCTGTGATGTGCCAT 57.330 45.000 0.00 0.00 0.00 4.40
204 232 2.475466 GCCTGTGATGTGCCATCGG 61.475 63.158 9.65 6.85 0.00 4.18
215 243 2.105128 CCATCGGTGGTCTCTCGC 59.895 66.667 6.53 0.00 40.83 5.03
225 253 1.941734 GTCTCTCGCGCCGATGAAG 60.942 63.158 0.00 0.00 34.61 3.02
268 296 0.804989 GCGGGATGTTGGAGAAGTTG 59.195 55.000 0.00 0.00 0.00 3.16
271 299 2.437413 GGGATGTTGGAGAAGTTGTCC 58.563 52.381 12.13 12.13 34.31 4.02
272 300 2.076863 GGATGTTGGAGAAGTTGTCCG 58.923 52.381 13.96 0.00 36.82 4.79
273 301 2.289444 GGATGTTGGAGAAGTTGTCCGA 60.289 50.000 13.96 9.65 36.82 4.55
373 401 3.458579 CGGCACAACGACGACGAG 61.459 66.667 15.32 8.51 42.66 4.18
1068 1154 2.202946 TTCGTGCACGCCAACTCA 60.203 55.556 33.63 12.62 39.60 3.41
1076 1162 0.453793 CACGCCAACTCAAACCAACA 59.546 50.000 0.00 0.00 0.00 3.33
1077 1163 0.738389 ACGCCAACTCAAACCAACAG 59.262 50.000 0.00 0.00 0.00 3.16
1078 1164 0.594796 CGCCAACTCAAACCAACAGC 60.595 55.000 0.00 0.00 0.00 4.40
1079 1165 0.459489 GCCAACTCAAACCAACAGCA 59.541 50.000 0.00 0.00 0.00 4.41
1080 1166 1.536709 GCCAACTCAAACCAACAGCAG 60.537 52.381 0.00 0.00 0.00 4.24
1081 1167 1.536709 CCAACTCAAACCAACAGCAGC 60.537 52.381 0.00 0.00 0.00 5.25
1082 1168 1.134753 CAACTCAAACCAACAGCAGCA 59.865 47.619 0.00 0.00 0.00 4.41
1083 1169 1.027357 ACTCAAACCAACAGCAGCAG 58.973 50.000 0.00 0.00 0.00 4.24
1084 1170 0.318445 CTCAAACCAACAGCAGCAGC 60.318 55.000 0.00 0.00 42.56 5.25
1085 1171 1.036481 TCAAACCAACAGCAGCAGCA 61.036 50.000 3.17 0.00 45.49 4.41
1086 1172 0.596600 CAAACCAACAGCAGCAGCAG 60.597 55.000 3.17 0.00 45.49 4.24
1087 1173 2.359570 AAACCAACAGCAGCAGCAGC 62.360 55.000 3.17 0.46 45.49 5.25
1176 1265 4.243008 TTCGGTGCGCAGTCCCAA 62.243 61.111 12.22 0.56 0.00 4.12
1191 1280 0.746063 CCCAACAGTTTCAGCAGCAA 59.254 50.000 0.00 0.00 0.00 3.91
1300 1401 2.092375 CCTCCACCTTAATGGGGAAGAC 60.092 54.545 3.14 0.00 43.79 3.01
1440 1542 3.659092 CCGCCGACAAAGCAAGCA 61.659 61.111 0.00 0.00 0.00 3.91
1498 1600 4.072839 AGTCTCAATGCCATGATGCTATG 58.927 43.478 0.00 0.00 0.00 2.23
1505 1607 7.396418 TCAATGCCATGATGCTATGATACTTA 58.604 34.615 0.00 0.00 0.00 2.24
1559 1661 4.926238 CACTAACATCGCAAGTTCTTCTCT 59.074 41.667 0.00 0.00 39.48 3.10
1889 1991 5.402630 ACCACCCTTTCTTTTTCATGGTAT 58.597 37.500 0.00 0.00 37.44 2.73
1928 2030 9.278978 TGAAGTATTTAGTCAAACATTACTGCA 57.721 29.630 0.00 0.00 27.15 4.41
2164 2273 6.099269 AGAGACTTCTAAGTGTGGGTTTAACA 59.901 38.462 0.00 0.00 39.88 2.41
2165 2274 6.655930 AGACTTCTAAGTGTGGGTTTAACAA 58.344 36.000 0.00 0.00 39.88 2.83
2166 2275 6.541278 AGACTTCTAAGTGTGGGTTTAACAAC 59.459 38.462 0.00 0.00 39.88 3.32
2170 2279 7.090953 TCTAAGTGTGGGTTTAACAACAAAG 57.909 36.000 4.77 4.28 34.15 2.77
2176 2285 7.171848 AGTGTGGGTTTAACAACAAAGAAAAAC 59.828 33.333 4.77 0.00 34.15 2.43
2293 2402 6.000219 TCAGGTTGAAGGAGAAAGAAATCTG 59.000 40.000 0.00 0.00 0.00 2.90
2366 2475 2.229792 CACCAAGCTTTCCTACTGCAA 58.770 47.619 0.00 0.00 0.00 4.08
2515 2624 8.738645 ACTCTGATTATGGTCTTGAATAAACC 57.261 34.615 0.00 0.00 0.00 3.27
2551 2660 1.654105 CTGTTAGTAGTCGGCGCTTTG 59.346 52.381 7.64 0.00 0.00 2.77
2709 2819 5.773176 AGGAGTTCCAACGAATACCATTTTT 59.227 36.000 0.28 0.00 38.89 1.94
2858 2968 8.314021 TCTAAGTTCAAACTAGCTTCATGATCA 58.686 33.333 0.00 0.00 38.57 2.92
2938 3050 7.039714 ACTGGGCCTAGAAATTTTACTTCTTTG 60.040 37.037 24.81 0.00 34.90 2.77
2990 3102 8.190888 TGAATGTTTTTATTTGTTCACCACAC 57.809 30.769 0.00 0.00 33.98 3.82
3013 3125 3.758300 CAAATGGGTACAGCGAAATGAC 58.242 45.455 0.00 0.00 0.00 3.06
3049 3161 5.236911 GCCTGTTGAATGAAAATGCAAAGAA 59.763 36.000 0.00 0.00 0.00 2.52
3178 3290 3.865446 TCTGCATGACTACACCATCAAG 58.135 45.455 0.00 0.00 0.00 3.02
3181 3293 4.847198 TGCATGACTACACCATCAAGAAT 58.153 39.130 0.00 0.00 0.00 2.40
3186 3298 7.415989 GCATGACTACACCATCAAGAATGATTT 60.416 37.037 0.00 0.00 43.89 2.17
3222 3334 5.976458 TGCCCCAGATGAACAATAAAAATC 58.024 37.500 0.00 0.00 0.00 2.17
3415 3527 1.826385 CACCATGAGGAACCAGGAAC 58.174 55.000 0.00 0.00 38.69 3.62
3418 3530 3.730160 CCATGAGGAACCAGGAACGGG 62.730 61.905 0.00 0.00 44.18 5.28
3425 3537 0.909623 AACCAGGAACGGGGTCATAG 59.090 55.000 0.00 0.00 42.51 2.23
3427 3539 0.909623 CCAGGAACGGGGTCATAGTT 59.090 55.000 0.00 0.00 40.98 2.24
3429 3541 2.290705 CCAGGAACGGGGTCATAGTTTT 60.291 50.000 0.00 0.00 40.98 2.43
3431 3543 2.910977 AGGAACGGGGTCATAGTTTTCT 59.089 45.455 0.00 0.00 0.00 2.52
3432 3544 4.081309 CAGGAACGGGGTCATAGTTTTCTA 60.081 45.833 0.00 0.00 36.78 2.10
3493 3707 2.993899 GTGAAACTATGACCACTGGACG 59.006 50.000 0.71 0.00 0.00 4.79
3687 3901 5.067153 GCTTGGGTGCCTTTTTAACATTTTT 59.933 36.000 0.00 0.00 0.00 1.94
3688 3902 6.442513 TTGGGTGCCTTTTTAACATTTTTG 57.557 33.333 0.00 0.00 0.00 2.44
3938 4153 1.992557 TCTGGGCAAGAACCATAACCT 59.007 47.619 0.00 0.00 37.38 3.50
3991 4206 8.934023 TCTTAGATTATGTGGTGAAGGTTTTT 57.066 30.769 0.00 0.00 0.00 1.94
4489 4706 9.204570 GTTACTTCTTAACTCATTCACAAGCTA 57.795 33.333 0.00 0.00 37.65 3.32
4522 4739 5.762218 GTGCATAGCTCATCTCCAAGTTATT 59.238 40.000 0.00 0.00 0.00 1.40
4597 4818 9.750125 GAAGGCATAATATTTTAGTTTTCAGGG 57.250 33.333 0.00 0.00 0.00 4.45
4869 5092 5.580297 CCAACTTTGCGGCATTTATTTACAT 59.420 36.000 2.28 0.00 0.00 2.29
4933 5157 5.924475 GCACGTTAGCCATGTATTCTAAT 57.076 39.130 0.00 0.00 0.00 1.73
4939 5163 7.871463 ACGTTAGCCATGTATTCTAATAAGTCC 59.129 37.037 0.00 0.00 0.00 3.85
4940 5164 8.088981 CGTTAGCCATGTATTCTAATAAGTCCT 58.911 37.037 0.00 0.00 0.00 3.85
4985 5210 2.846206 TGATCCAGTCAGTGCCCTTTAT 59.154 45.455 0.00 0.00 31.80 1.40
5030 5255 2.087646 GTGGCATCAAAGTCTTCTCCC 58.912 52.381 0.00 0.00 0.00 4.30
5068 5293 7.979444 TTTCGACTATTTTGATCCTTGTCTT 57.021 32.000 0.00 0.00 0.00 3.01
5179 5410 5.292101 GGAGAGTGTACAACAATGTAGATGC 59.708 44.000 0.00 0.00 42.54 3.91
5184 5415 1.739466 ACAACAATGTAGATGCAGGCG 59.261 47.619 0.00 0.00 38.24 5.52
5199 5430 2.279517 GCGGGTCGATTCGATGCT 60.280 61.111 12.54 0.00 38.42 3.79
5218 5449 4.057224 TGCTTGGCACCACTTACG 57.943 55.556 0.00 0.00 31.71 3.18
5237 5469 0.606096 GTTTGCTTGCCCCCGTTTAT 59.394 50.000 0.00 0.00 0.00 1.40
5238 5470 1.819903 GTTTGCTTGCCCCCGTTTATA 59.180 47.619 0.00 0.00 0.00 0.98
5239 5471 1.757682 TTGCTTGCCCCCGTTTATAG 58.242 50.000 0.00 0.00 0.00 1.31
5240 5472 0.913205 TGCTTGCCCCCGTTTATAGA 59.087 50.000 0.00 0.00 0.00 1.98
5266 5498 3.939066 GGCAACTAGAGCTAGAAACCAA 58.061 45.455 11.28 0.00 36.97 3.67
5309 5550 3.855379 GCATGCAGTACATCATGTGTTTG 59.145 43.478 14.21 0.00 42.29 2.93
5338 5579 7.722728 ACATGCCTTATTCATGAAGTGATATGT 59.277 33.333 14.54 15.09 42.84 2.29
5383 5624 5.613358 ACTGATTCTAGCCGAACAAAAAG 57.387 39.130 0.00 0.00 33.72 2.27
5395 5636 5.407502 CCGAACAAAAAGGAAAAAGAGTGT 58.592 37.500 0.00 0.00 0.00 3.55
5413 5654 5.354234 AGAGTGTGAAGTAAACCAACACTTG 59.646 40.000 8.05 0.00 37.13 3.16
5424 5665 0.027979 CAACACTTGTCACGCTGTGG 59.972 55.000 8.46 0.00 35.02 4.17
5430 5671 1.195448 CTTGTCACGCTGTGGAATCAC 59.805 52.381 8.46 0.00 43.87 3.06
5457 5698 1.567504 CGTGAAGGTCGTCACACTTT 58.432 50.000 15.07 0.00 46.90 2.66
5458 5699 1.521423 CGTGAAGGTCGTCACACTTTC 59.479 52.381 15.07 0.00 46.90 2.62
5475 5716 4.809426 CACTTTCCGGATGTTGGATAGTAC 59.191 45.833 4.15 0.00 43.24 2.73
5477 5718 5.189145 ACTTTCCGGATGTTGGATAGTACTT 59.811 40.000 4.15 0.00 43.26 2.24
5478 5719 4.931661 TCCGGATGTTGGATAGTACTTC 57.068 45.455 0.00 0.00 0.00 3.01
5479 5720 3.640029 TCCGGATGTTGGATAGTACTTCC 59.360 47.826 0.00 8.80 36.03 3.46
5480 5721 3.641906 CCGGATGTTGGATAGTACTTCCT 59.358 47.826 18.78 5.12 36.79 3.36
5481 5722 4.262079 CCGGATGTTGGATAGTACTTCCTC 60.262 50.000 18.78 14.01 36.79 3.71
5482 5723 4.262079 CGGATGTTGGATAGTACTTCCTCC 60.262 50.000 18.78 16.19 36.79 4.30
5483 5724 4.262079 GGATGTTGGATAGTACTTCCTCCG 60.262 50.000 18.78 0.00 36.30 4.63
5484 5725 3.705051 TGTTGGATAGTACTTCCTCCGT 58.295 45.455 18.78 0.00 34.17 4.69
5485 5726 4.091549 TGTTGGATAGTACTTCCTCCGTT 58.908 43.478 18.78 0.00 34.17 4.44
5486 5727 4.159135 TGTTGGATAGTACTTCCTCCGTTC 59.841 45.833 18.78 10.58 34.17 3.95
5487 5728 3.972133 TGGATAGTACTTCCTCCGTTCA 58.028 45.455 18.78 1.24 34.17 3.18
5488 5729 3.952323 TGGATAGTACTTCCTCCGTTCAG 59.048 47.826 18.78 0.00 34.17 3.02
5489 5730 4.205587 GGATAGTACTTCCTCCGTTCAGA 58.794 47.826 0.00 0.00 0.00 3.27
5490 5731 4.643784 GGATAGTACTTCCTCCGTTCAGAA 59.356 45.833 0.00 0.00 0.00 3.02
5491 5732 5.302313 GGATAGTACTTCCTCCGTTCAGAAT 59.698 44.000 0.00 0.00 0.00 2.40
5492 5733 6.183360 GGATAGTACTTCCTCCGTTCAGAATT 60.183 42.308 0.00 0.00 0.00 2.17
5493 5734 7.014038 GGATAGTACTTCCTCCGTTCAGAATTA 59.986 40.741 0.00 0.00 0.00 1.40
5494 5735 5.963594 AGTACTTCCTCCGTTCAGAATTAC 58.036 41.667 0.00 0.00 0.00 1.89
5495 5736 5.715753 AGTACTTCCTCCGTTCAGAATTACT 59.284 40.000 0.00 0.00 33.60 2.24
5496 5737 5.485209 ACTTCCTCCGTTCAGAATTACTT 57.515 39.130 0.00 0.00 0.00 2.24
5497 5738 5.238583 ACTTCCTCCGTTCAGAATTACTTG 58.761 41.667 0.00 0.00 0.00 3.16
5498 5739 4.884668 TCCTCCGTTCAGAATTACTTGT 57.115 40.909 0.00 0.00 0.00 3.16
5499 5740 4.817517 TCCTCCGTTCAGAATTACTTGTC 58.182 43.478 0.00 0.00 0.00 3.18
5500 5741 3.612860 CCTCCGTTCAGAATTACTTGTCG 59.387 47.826 0.00 0.00 0.00 4.35
5501 5742 2.991190 TCCGTTCAGAATTACTTGTCGC 59.009 45.455 0.00 0.00 0.00 5.19
5502 5743 2.734606 CCGTTCAGAATTACTTGTCGCA 59.265 45.455 0.00 0.00 0.00 5.10
5503 5744 3.181530 CCGTTCAGAATTACTTGTCGCAG 60.182 47.826 0.00 0.00 0.00 5.18
5504 5745 3.673338 CGTTCAGAATTACTTGTCGCAGA 59.327 43.478 0.00 0.00 0.00 4.26
5505 5746 4.149922 CGTTCAGAATTACTTGTCGCAGAA 59.850 41.667 0.00 0.00 39.69 3.02
5506 5747 5.333035 CGTTCAGAATTACTTGTCGCAGAAA 60.333 40.000 0.00 0.00 39.69 2.52
5507 5748 6.603095 GTTCAGAATTACTTGTCGCAGAAAT 58.397 36.000 0.00 0.00 39.69 2.17
5508 5749 6.169419 TCAGAATTACTTGTCGCAGAAATG 57.831 37.500 0.00 0.00 39.69 2.32
5509 5750 5.122239 TCAGAATTACTTGTCGCAGAAATGG 59.878 40.000 0.00 0.00 39.69 3.16
5510 5751 5.122239 CAGAATTACTTGTCGCAGAAATGGA 59.878 40.000 0.00 0.00 39.69 3.41
5511 5752 5.882557 AGAATTACTTGTCGCAGAAATGGAT 59.117 36.000 0.00 0.00 39.69 3.41
5512 5753 4.944962 TTACTTGTCGCAGAAATGGATG 57.055 40.909 0.00 0.00 39.69 3.51
5513 5754 2.783135 ACTTGTCGCAGAAATGGATGT 58.217 42.857 0.00 0.00 39.69 3.06
5514 5755 3.937814 ACTTGTCGCAGAAATGGATGTA 58.062 40.909 0.00 0.00 39.69 2.29
5515 5756 4.517285 ACTTGTCGCAGAAATGGATGTAT 58.483 39.130 0.00 0.00 39.69 2.29
5516 5757 4.572389 ACTTGTCGCAGAAATGGATGTATC 59.428 41.667 0.00 0.00 39.69 2.24
5517 5758 4.406648 TGTCGCAGAAATGGATGTATCT 57.593 40.909 0.00 0.00 39.69 1.98
5518 5759 5.529581 TGTCGCAGAAATGGATGTATCTA 57.470 39.130 0.00 0.00 39.69 1.98
5519 5760 5.532557 TGTCGCAGAAATGGATGTATCTAG 58.467 41.667 0.00 0.00 39.69 2.43
5520 5761 5.301805 TGTCGCAGAAATGGATGTATCTAGA 59.698 40.000 0.00 0.00 39.69 2.43
5521 5762 6.015095 TGTCGCAGAAATGGATGTATCTAGAT 60.015 38.462 10.73 10.73 39.69 1.98
5522 5763 6.309980 GTCGCAGAAATGGATGTATCTAGATG 59.690 42.308 15.79 0.00 39.69 2.90
5523 5764 6.015095 TCGCAGAAATGGATGTATCTAGATGT 60.015 38.462 15.79 1.25 0.00 3.06
5524 5765 7.176690 TCGCAGAAATGGATGTATCTAGATGTA 59.823 37.037 15.79 4.44 0.00 2.29
5525 5766 7.978414 CGCAGAAATGGATGTATCTAGATGTAT 59.022 37.037 15.79 9.11 0.00 2.29
5526 5767 9.664332 GCAGAAATGGATGTATCTAGATGTATT 57.336 33.333 15.79 4.32 0.00 1.89
5555 5796 9.341899 AGTTTTAGATACATTCATTTTTGCGAC 57.658 29.630 0.00 0.00 0.00 5.19
5556 5797 9.123709 GTTTTAGATACATTCATTTTTGCGACA 57.876 29.630 0.00 0.00 0.00 4.35
5557 5798 9.684448 TTTTAGATACATTCATTTTTGCGACAA 57.316 25.926 0.00 0.00 0.00 3.18
5558 5799 8.894409 TTAGATACATTCATTTTTGCGACAAG 57.106 30.769 0.00 0.00 0.00 3.16
5559 5800 6.913170 AGATACATTCATTTTTGCGACAAGT 58.087 32.000 0.00 0.00 0.00 3.16
5560 5801 8.039603 AGATACATTCATTTTTGCGACAAGTA 57.960 30.769 0.00 0.00 0.00 2.24
5561 5802 8.511321 AGATACATTCATTTTTGCGACAAGTAA 58.489 29.630 0.00 0.00 0.00 2.24
5562 5803 9.289303 GATACATTCATTTTTGCGACAAGTAAT 57.711 29.630 0.00 0.00 0.00 1.89
5563 5804 7.945033 ACATTCATTTTTGCGACAAGTAATT 57.055 28.000 0.00 0.00 0.00 1.40
5564 5805 8.006741 ACATTCATTTTTGCGACAAGTAATTC 57.993 30.769 0.00 0.00 0.00 2.17
5565 5806 7.116233 ACATTCATTTTTGCGACAAGTAATTCC 59.884 33.333 0.00 0.00 0.00 3.01
5566 5807 5.150683 TCATTTTTGCGACAAGTAATTCCG 58.849 37.500 0.00 0.00 0.00 4.30
5567 5808 4.815040 TTTTTGCGACAAGTAATTCCGA 57.185 36.364 0.00 0.00 0.00 4.55
5568 5809 4.815040 TTTTGCGACAAGTAATTCCGAA 57.185 36.364 0.00 0.00 0.00 4.30
5569 5810 3.799137 TTGCGACAAGTAATTCCGAAC 57.201 42.857 0.00 0.00 0.00 3.95
5570 5811 1.722464 TGCGACAAGTAATTCCGAACG 59.278 47.619 0.00 0.00 0.00 3.95
5571 5812 1.060122 GCGACAAGTAATTCCGAACGG 59.940 52.381 6.94 6.94 0.00 4.44
5572 5813 2.598589 CGACAAGTAATTCCGAACGGA 58.401 47.619 12.04 12.04 43.52 4.69
5573 5814 2.597305 CGACAAGTAATTCCGAACGGAG 59.403 50.000 15.34 5.60 46.06 4.63
5574 5815 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
5575 5816 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
5576 5817 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
5577 5818 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
5578 5819 1.479730 GTAATTCCGAACGGAGGGAGT 59.520 52.381 15.34 4.12 46.06 3.85
5579 5820 1.856629 AATTCCGAACGGAGGGAGTA 58.143 50.000 15.34 1.05 46.06 2.59
5580 5821 1.400737 ATTCCGAACGGAGGGAGTAG 58.599 55.000 15.34 0.00 46.06 2.57
5581 5822 0.038744 TTCCGAACGGAGGGAGTAGT 59.961 55.000 15.34 0.00 46.06 2.73
5582 5823 0.911769 TCCGAACGGAGGGAGTAGTA 59.088 55.000 12.04 0.00 39.76 1.82
5583 5824 1.134280 TCCGAACGGAGGGAGTAGTAG 60.134 57.143 12.04 0.00 39.76 2.57
5584 5825 0.662085 CGAACGGAGGGAGTAGTAGC 59.338 60.000 0.00 0.00 0.00 3.58
5590 5831 0.747852 GAGGGAGTAGTAGCACCTGC 59.252 60.000 0.00 0.00 42.49 4.85
5610 5851 2.159707 GCTTCGAAACTCAATGCGCTTA 60.160 45.455 9.73 0.00 0.00 3.09
5613 5854 2.351418 TCGAAACTCAATGCGCTTATGG 59.649 45.455 9.73 0.00 0.00 2.74
5614 5855 2.539547 CGAAACTCAATGCGCTTATGGG 60.540 50.000 9.73 7.50 0.00 4.00
5615 5856 2.418368 AACTCAATGCGCTTATGGGA 57.582 45.000 9.73 0.00 0.00 4.37
5616 5857 2.418368 ACTCAATGCGCTTATGGGAA 57.582 45.000 9.73 0.00 0.00 3.97
5617 5858 2.722094 ACTCAATGCGCTTATGGGAAA 58.278 42.857 9.73 0.00 0.00 3.13
5621 5862 5.536161 ACTCAATGCGCTTATGGGAAATAAT 59.464 36.000 9.73 0.00 0.00 1.28
5628 5869 5.713025 CGCTTATGGGAAATAATTGGATGG 58.287 41.667 0.00 0.00 0.00 3.51
5644 5885 0.685458 ATGGCAATCCTTCAGCACCC 60.685 55.000 0.00 0.00 0.00 4.61
5645 5886 2.054453 GGCAATCCTTCAGCACCCC 61.054 63.158 0.00 0.00 0.00 4.95
5646 5887 1.000396 GCAATCCTTCAGCACCCCT 60.000 57.895 0.00 0.00 0.00 4.79
5647 5888 0.613012 GCAATCCTTCAGCACCCCTT 60.613 55.000 0.00 0.00 0.00 3.95
5649 5890 2.250924 CAATCCTTCAGCACCCCTTTT 58.749 47.619 0.00 0.00 0.00 2.27
5650 5891 1.928868 ATCCTTCAGCACCCCTTTTG 58.071 50.000 0.00 0.00 0.00 2.44
5651 5892 0.178964 TCCTTCAGCACCCCTTTTGG 60.179 55.000 0.00 0.00 39.97 3.28
5652 5893 1.667722 CTTCAGCACCCCTTTTGGC 59.332 57.895 0.00 0.00 38.58 4.52
5653 5894 1.820010 CTTCAGCACCCCTTTTGGCC 61.820 60.000 0.00 0.00 38.58 5.36
5654 5895 2.523902 CAGCACCCCTTTTGGCCA 60.524 61.111 0.00 0.00 38.58 5.36
5655 5896 1.914764 CAGCACCCCTTTTGGCCAT 60.915 57.895 6.09 0.00 38.58 4.40
5656 5897 1.152052 AGCACCCCTTTTGGCCATT 60.152 52.632 6.09 0.00 38.58 3.16
5657 5898 1.194121 AGCACCCCTTTTGGCCATTC 61.194 55.000 6.09 0.00 38.58 2.67
5658 5899 1.479368 GCACCCCTTTTGGCCATTCA 61.479 55.000 6.09 0.00 38.58 2.57
5659 5900 1.278537 CACCCCTTTTGGCCATTCAT 58.721 50.000 6.09 0.00 38.58 2.57
5660 5901 1.065998 CACCCCTTTTGGCCATTCATG 60.066 52.381 6.09 0.00 38.58 3.07
5661 5902 0.107557 CCCCTTTTGGCCATTCATGC 60.108 55.000 6.09 0.00 38.58 4.06
5662 5903 0.460635 CCCTTTTGGCCATTCATGCG 60.461 55.000 6.09 0.00 38.58 4.73
5663 5904 1.085501 CCTTTTGGCCATTCATGCGC 61.086 55.000 6.09 0.00 0.00 6.09
5670 5911 1.353609 GCCATTCATGCGCCAAACAC 61.354 55.000 4.18 0.00 0.00 3.32
5673 5914 2.339418 CATTCATGCGCCAAACACAAT 58.661 42.857 4.18 0.00 0.00 2.71
5674 5915 2.522836 TTCATGCGCCAAACACAATT 57.477 40.000 4.18 0.00 0.00 2.32
5675 5916 3.650070 TTCATGCGCCAAACACAATTA 57.350 38.095 4.18 0.00 0.00 1.40
5678 5919 3.443329 TCATGCGCCAAACACAATTATCT 59.557 39.130 4.18 0.00 0.00 1.98
5683 5924 5.644206 TGCGCCAAACACAATTATCTTACTA 59.356 36.000 4.18 0.00 0.00 1.82
5684 5925 6.183360 TGCGCCAAACACAATTATCTTACTAG 60.183 38.462 4.18 0.00 0.00 2.57
5685 5926 6.183360 GCGCCAAACACAATTATCTTACTAGT 60.183 38.462 0.00 0.00 0.00 2.57
5693 5934 7.711339 ACACAATTATCTTACTAGTTAGCCTGC 59.289 37.037 0.00 0.00 0.00 4.85
5694 5935 7.710907 CACAATTATCTTACTAGTTAGCCTGCA 59.289 37.037 0.00 0.00 0.00 4.41
5696 5937 8.715998 CAATTATCTTACTAGTTAGCCTGCATG 58.284 37.037 0.00 0.00 0.00 4.06
5697 5938 7.597288 TTATCTTACTAGTTAGCCTGCATGA 57.403 36.000 0.00 0.00 0.00 3.07
5698 5939 5.521906 TCTTACTAGTTAGCCTGCATGAG 57.478 43.478 0.00 0.00 0.00 2.90
5700 5941 2.114616 ACTAGTTAGCCTGCATGAGCT 58.885 47.619 10.45 10.45 42.74 4.09
5701 5942 2.503356 ACTAGTTAGCCTGCATGAGCTT 59.497 45.455 10.82 0.00 42.74 3.74
5702 5943 2.503895 AGTTAGCCTGCATGAGCTTT 57.496 45.000 10.82 0.00 42.74 3.51
5703 5944 2.800250 AGTTAGCCTGCATGAGCTTTT 58.200 42.857 10.82 0.00 42.74 2.27
5704 5945 2.490903 AGTTAGCCTGCATGAGCTTTTG 59.509 45.455 10.82 0.00 42.74 2.44
5705 5946 2.489329 GTTAGCCTGCATGAGCTTTTGA 59.511 45.455 10.82 0.00 42.74 2.69
5718 5959 4.158394 TGAGCTTTTGACAAGTTGCTCTTT 59.842 37.500 25.25 5.22 44.80 2.52
5728 5969 2.906354 AGTTGCTCTTTCGTCTGTTGT 58.094 42.857 0.00 0.00 0.00 3.32
5730 5971 1.487482 TGCTCTTTCGTCTGTTGTCG 58.513 50.000 0.00 0.00 0.00 4.35
5731 5972 1.066454 TGCTCTTTCGTCTGTTGTCGA 59.934 47.619 0.00 0.00 32.52 4.20
5736 5977 2.401017 TTCGTCTGTTGTCGAGTCTG 57.599 50.000 0.00 0.00 35.48 3.51
5746 5987 3.431922 TGTCGAGTCTGAAGAAACGTT 57.568 42.857 0.00 0.00 0.00 3.99
5747 5988 3.113322 TGTCGAGTCTGAAGAAACGTTG 58.887 45.455 0.00 0.00 0.00 4.10
5754 5995 2.220824 TCTGAAGAAACGTTGTCATGCG 59.779 45.455 0.00 0.00 0.00 4.73
5756 5997 2.609916 TGAAGAAACGTTGTCATGCGAA 59.390 40.909 0.00 0.00 0.00 4.70
5777 6020 5.593010 GAAGCCATCTTCAGATTAGTACGT 58.407 41.667 0.00 0.00 46.14 3.57
5778 6021 4.938080 AGCCATCTTCAGATTAGTACGTG 58.062 43.478 0.00 0.00 31.21 4.49
5781 6024 4.979197 CCATCTTCAGATTAGTACGTGCTC 59.021 45.833 10.21 0.00 31.21 4.26
5782 6025 4.634184 TCTTCAGATTAGTACGTGCTCC 57.366 45.455 10.21 0.85 0.00 4.70
5783 6026 3.064958 TCTTCAGATTAGTACGTGCTCCG 59.935 47.826 10.21 0.00 44.03 4.63
5784 6027 1.065102 TCAGATTAGTACGTGCTCCGC 59.935 52.381 10.21 0.25 41.42 5.54
5785 6028 0.384669 AGATTAGTACGTGCTCCGCC 59.615 55.000 10.21 0.00 41.42 6.13
5786 6029 0.101759 GATTAGTACGTGCTCCGCCA 59.898 55.000 10.21 0.00 41.42 5.69
5787 6030 0.750850 ATTAGTACGTGCTCCGCCAT 59.249 50.000 10.21 0.00 41.42 4.40
5788 6031 0.533491 TTAGTACGTGCTCCGCCATT 59.467 50.000 10.21 0.00 41.42 3.16
5789 6032 1.391577 TAGTACGTGCTCCGCCATTA 58.608 50.000 10.21 0.00 41.42 1.90
5790 6033 0.179119 AGTACGTGCTCCGCCATTAC 60.179 55.000 0.00 0.00 41.42 1.89
5791 6034 0.179119 GTACGTGCTCCGCCATTACT 60.179 55.000 0.00 0.00 41.42 2.24
5792 6035 0.179121 TACGTGCTCCGCCATTACTG 60.179 55.000 0.00 0.00 41.42 2.74
5793 6036 2.813179 CGTGCTCCGCCATTACTGC 61.813 63.158 0.00 0.00 0.00 4.40
5884 6131 4.500116 GCGGCCTCGTCCTCACTC 62.500 72.222 0.00 0.00 38.89 3.51
5885 6132 3.062466 CGGCCTCGTCCTCACTCA 61.062 66.667 0.00 0.00 0.00 3.41
5886 6133 2.574399 GGCCTCGTCCTCACTCAC 59.426 66.667 0.00 0.00 0.00 3.51
5888 6135 3.007973 GCCTCGTCCTCACTCACCC 62.008 68.421 0.00 0.00 0.00 4.61
5889 6136 1.606601 CCTCGTCCTCACTCACCCA 60.607 63.158 0.00 0.00 0.00 4.51
5891 6138 1.878656 CTCGTCCTCACTCACCCACC 61.879 65.000 0.00 0.00 0.00 4.61
5894 6141 2.207229 TCCTCACTCACCCACCACG 61.207 63.158 0.00 0.00 0.00 4.94
5895 6142 2.343758 CTCACTCACCCACCACGG 59.656 66.667 0.00 0.00 0.00 4.94
5926 6186 0.394192 TACTCGCCGCCTAGCTACTA 59.606 55.000 0.00 0.00 0.00 1.82
5927 6187 1.165284 ACTCGCCGCCTAGCTACTAC 61.165 60.000 0.00 0.00 0.00 2.73
5928 6188 1.153107 TCGCCGCCTAGCTACTACA 60.153 57.895 0.00 0.00 0.00 2.74
5929 6189 0.536687 TCGCCGCCTAGCTACTACAT 60.537 55.000 0.00 0.00 0.00 2.29
5930 6190 1.162698 CGCCGCCTAGCTACTACATA 58.837 55.000 0.00 0.00 0.00 2.29
5931 6191 1.135746 CGCCGCCTAGCTACTACATAC 60.136 57.143 0.00 0.00 0.00 2.39
5932 6192 2.161030 GCCGCCTAGCTACTACATACT 58.839 52.381 0.00 0.00 0.00 2.12
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
146 147 0.603569 AGGTGATCGAACGAGCTTGT 59.396 50.000 13.19 0.00 0.00 3.16
149 150 0.965866 TGGAGGTGATCGAACGAGCT 60.966 55.000 13.19 0.00 0.00 4.09
150 151 0.103208 ATGGAGGTGATCGAACGAGC 59.897 55.000 5.52 5.52 0.00 5.03
152 153 1.470051 TGATGGAGGTGATCGAACGA 58.530 50.000 0.00 0.00 0.00 3.85
153 154 2.223805 TGATGATGGAGGTGATCGAACG 60.224 50.000 0.00 0.00 0.00 3.95
154 155 3.459232 TGATGATGGAGGTGATCGAAC 57.541 47.619 0.00 0.00 0.00 3.95
155 156 3.452264 AGTTGATGATGGAGGTGATCGAA 59.548 43.478 0.00 0.00 0.00 3.71
156 157 3.033909 AGTTGATGATGGAGGTGATCGA 58.966 45.455 0.00 0.00 0.00 3.59
157 158 3.129109 CAGTTGATGATGGAGGTGATCG 58.871 50.000 0.00 0.00 0.00 3.69
158 159 4.412796 TCAGTTGATGATGGAGGTGATC 57.587 45.455 0.00 0.00 31.12 2.92
175 176 4.758674 GCACATCACAGGCATATAATCAGT 59.241 41.667 0.00 0.00 0.00 3.41
176 177 4.155462 GGCACATCACAGGCATATAATCAG 59.845 45.833 0.00 0.00 0.00 2.90
178 179 4.074259 TGGCACATCACAGGCATATAATC 58.926 43.478 0.00 0.00 35.21 1.75
180 181 3.574354 TGGCACATCACAGGCATATAA 57.426 42.857 0.00 0.00 35.21 0.98
200 201 4.194720 GCGCGAGAGACCACCGAT 62.195 66.667 12.10 0.00 0.00 4.18
204 232 4.194720 ATCGGCGCGAGAGACCAC 62.195 66.667 12.10 0.00 39.91 4.16
207 235 1.941734 CTTCATCGGCGCGAGAGAC 60.942 63.158 12.10 0.00 39.91 3.36
214 242 3.857038 TACCCCCTTCATCGGCGC 61.857 66.667 0.00 0.00 0.00 6.53
215 243 2.108362 GTACCCCCTTCATCGGCG 59.892 66.667 0.00 0.00 0.00 6.46
218 246 0.386838 GGTACGTACCCCCTTCATCG 59.613 60.000 30.84 0.00 40.53 3.84
363 391 2.031616 TGTCCTCCTCGTCGTCGT 59.968 61.111 1.33 0.00 38.33 4.34
369 397 3.374402 CGCTGGTGTCCTCCTCGT 61.374 66.667 0.00 0.00 0.00 4.18
399 428 0.602106 AGAGACCACGAACGAGACGA 60.602 55.000 0.14 0.00 34.70 4.20
1068 1154 1.737816 CTGCTGCTGCTGTTGGTTT 59.262 52.632 17.00 0.00 40.48 3.27
1176 1265 0.383231 GCTGTTGCTGCTGAAACTGT 59.617 50.000 18.45 0.00 34.36 3.55
1191 1280 1.377725 CGGATTGGGCTTCTGCTGT 60.378 57.895 0.00 0.00 39.59 4.40
1263 1364 2.032681 GGCAGACGAACCTTGGCT 59.967 61.111 0.00 0.00 0.00 4.75
1300 1401 9.939802 TGATGAAATATCATACAGAGGAAGATG 57.060 33.333 0.00 0.00 46.30 2.90
1359 1461 3.378112 ACAACAATTCACCAGTCACACAG 59.622 43.478 0.00 0.00 0.00 3.66
1505 1607 7.056635 CCCATAACCAAGTCAAGTAAGATCAT 58.943 38.462 0.00 0.00 0.00 2.45
1513 1615 1.349688 TCGCCCATAACCAAGTCAAGT 59.650 47.619 0.00 0.00 0.00 3.16
1559 1661 1.685180 CGGGGTCTGTACAGGATCTGA 60.685 57.143 22.48 0.00 35.18 3.27
1681 1783 4.972591 GCTGTTGAAGCGGCATTT 57.027 50.000 1.45 0.00 43.45 2.32
2065 2167 8.173412 TCCACATATCTCTATGACTCTACCAAT 58.827 37.037 0.00 0.00 38.49 3.16
2104 2206 0.465705 CACGGGCATAGACCATGTCT 59.534 55.000 1.94 1.94 45.54 3.41
2164 2273 7.877612 ACAAAGGTTGATCTGTTTTTCTTTGTT 59.122 29.630 10.95 0.00 45.78 2.83
2165 2274 7.386059 ACAAAGGTTGATCTGTTTTTCTTTGT 58.614 30.769 10.95 10.95 44.30 2.83
2166 2275 7.832503 ACAAAGGTTGATCTGTTTTTCTTTG 57.167 32.000 0.00 0.00 42.90 2.77
2170 2279 7.857885 CAGTCTACAAAGGTTGATCTGTTTTTC 59.142 37.037 0.00 0.00 31.63 2.29
2176 2285 4.899502 ACCAGTCTACAAAGGTTGATCTG 58.100 43.478 0.00 0.00 32.99 2.90
2293 2402 2.468831 TCCGTCAACTTTGCATTTTGC 58.531 42.857 0.00 0.00 45.29 3.68
2366 2475 1.734655 TTCACTTCTGGGAAGGAGCT 58.265 50.000 11.26 0.00 0.00 4.09
2515 2624 5.159209 ACTAACAGAGTAACCGAATCAACG 58.841 41.667 0.00 0.00 36.27 4.10
2551 2660 9.106070 ACAATTTATGGTAACCGAGTATTCTTC 57.894 33.333 0.00 0.00 0.00 2.87
2682 2792 2.007608 GTATTCGTTGGAACTCCTGGC 58.992 52.381 0.00 0.00 34.37 4.85
2709 2819 2.168496 GTAGACTGTGTAGGCTGACCA 58.832 52.381 0.00 0.00 43.92 4.02
2938 3050 7.027778 ACAGTTAACACAATTTGAGGAGAAC 57.972 36.000 8.61 2.31 0.00 3.01
2978 3090 1.202348 CCATTTGCGTGTGGTGAACAA 60.202 47.619 0.00 0.00 41.57 2.83
2990 3102 0.519519 TTTCGCTGTACCCATTTGCG 59.480 50.000 0.00 0.00 46.71 4.85
3013 3125 2.517959 TCAACAGGCCTTTCATCTTGG 58.482 47.619 0.00 0.00 0.00 3.61
3049 3161 7.889600 ACATCAAAAGGGGAAATGCAAATATTT 59.110 29.630 0.00 0.00 33.19 1.40
3170 3282 9.730705 ATATCGTATGAAATCATTCTTGATGGT 57.269 29.630 0.55 0.00 41.83 3.55
3178 3290 7.023575 GGGCAACATATCGTATGAAATCATTC 58.976 38.462 0.55 0.00 36.55 2.67
3181 3293 4.759693 GGGGCAACATATCGTATGAAATCA 59.240 41.667 10.64 0.00 39.74 2.57
3186 3298 2.969262 TCTGGGGCAACATATCGTATGA 59.031 45.455 10.64 0.00 39.74 2.15
3415 3527 5.124776 TGCAAATTAGAAAACTATGACCCCG 59.875 40.000 0.00 0.00 0.00 5.73
3418 3530 9.638239 TTTCATGCAAATTAGAAAACTATGACC 57.362 29.630 0.00 0.00 0.00 4.02
3425 3537 8.490355 CACCTTCTTTCATGCAAATTAGAAAAC 58.510 33.333 0.00 0.00 30.49 2.43
3427 3539 7.153985 CCACCTTCTTTCATGCAAATTAGAAA 58.846 34.615 0.00 0.00 0.00 2.52
3429 3541 5.774690 ACCACCTTCTTTCATGCAAATTAGA 59.225 36.000 0.00 0.00 0.00 2.10
3431 3543 5.782047 CACCACCTTCTTTCATGCAAATTA 58.218 37.500 0.00 0.00 0.00 1.40
3432 3544 4.634199 CACCACCTTCTTTCATGCAAATT 58.366 39.130 0.00 0.00 0.00 1.82
3628 3842 4.102210 TGCAGATCTCCTAAAGAAGGGATG 59.898 45.833 0.00 0.00 46.55 3.51
4085 4302 5.131475 TCCTAAAACTGTGTCTTACCAAGGT 59.869 40.000 0.00 0.00 0.00 3.50
4200 4417 8.082852 TGAAACTTCACTCTGTTACAGATAGAC 58.917 37.037 15.91 5.46 34.48 2.59
4522 4739 4.458989 GTGTCACCAATTTAGATGCTGGAA 59.541 41.667 0.00 0.00 32.97 3.53
4591 4812 6.197168 AGAAATCAAGGCATAAATCCCTGAA 58.803 36.000 0.00 0.00 0.00 3.02
4593 4814 6.475596 AAGAAATCAAGGCATAAATCCCTG 57.524 37.500 0.00 0.00 0.00 4.45
4802 5024 5.496556 AGCAGTACCATTTATGCTACACAA 58.503 37.500 3.41 0.00 46.70 3.33
4845 5067 4.926238 TGTAAATAAATGCCGCAAAGTTGG 59.074 37.500 0.00 0.00 0.00 3.77
4849 5071 6.884096 TTCATGTAAATAAATGCCGCAAAG 57.116 33.333 0.00 0.00 0.00 2.77
4914 5138 8.088981 AGGACTTATTAGAATACATGGCTAACG 58.911 37.037 0.00 0.00 0.00 3.18
4933 5157 6.222389 CACAATTGCAAAATTCCAGGACTTA 58.778 36.000 1.71 0.00 0.00 2.24
4939 5163 3.998341 CCTCCACAATTGCAAAATTCCAG 59.002 43.478 1.71 0.00 0.00 3.86
4940 5164 3.806507 GCCTCCACAATTGCAAAATTCCA 60.807 43.478 1.71 0.00 0.00 3.53
4985 5210 6.071334 CCTCAACTACATAGAAAGAGACCACA 60.071 42.308 0.00 0.00 0.00 4.17
5068 5293 4.633126 CGGCAGATGAGAATTTCTTCAAGA 59.367 41.667 0.00 0.00 33.54 3.02
5179 5410 1.951130 CATCGAATCGACCCGCCTG 60.951 63.158 7.77 0.00 39.18 4.85
5184 5415 1.766143 GCACAGCATCGAATCGACCC 61.766 60.000 7.77 1.54 39.18 4.46
5218 5449 0.606096 ATAAACGGGGGCAAGCAAAC 59.394 50.000 0.00 0.00 0.00 2.93
5237 5469 5.756918 TCTAGCTCTAGTTGCCTTCTTCTA 58.243 41.667 0.00 0.00 34.84 2.10
5238 5470 4.605183 TCTAGCTCTAGTTGCCTTCTTCT 58.395 43.478 0.00 0.00 34.84 2.85
5239 5471 4.993029 TCTAGCTCTAGTTGCCTTCTTC 57.007 45.455 0.00 0.00 34.84 2.87
5240 5472 5.483811 GTTTCTAGCTCTAGTTGCCTTCTT 58.516 41.667 0.00 0.00 34.84 2.52
5256 5488 5.059833 ACTGCTCAACTCTTTGGTTTCTAG 58.940 41.667 0.00 0.00 33.06 2.43
5309 5550 7.320443 TCACTTCATGAATAAGGCATGTAAC 57.680 36.000 8.96 0.00 42.77 2.50
5338 5579 3.118334 TCGTGTTTACTTTGGTTCCTCCA 60.118 43.478 0.00 0.00 45.60 3.86
5357 5598 2.230508 TGTTCGGCTAGAATCAGTTCGT 59.769 45.455 0.00 0.00 41.49 3.85
5358 5599 2.876091 TGTTCGGCTAGAATCAGTTCG 58.124 47.619 0.00 0.00 41.49 3.95
5383 5624 6.445357 TGGTTTACTTCACACTCTTTTTCC 57.555 37.500 0.00 0.00 0.00 3.13
5395 5636 4.093703 CGTGACAAGTGTTGGTTTACTTCA 59.906 41.667 0.00 0.00 35.08 3.02
5424 5665 0.669318 TTCACGCGGTCCTGTGATTC 60.669 55.000 12.47 0.00 43.99 2.52
5430 5671 2.432628 GACCTTCACGCGGTCCTG 60.433 66.667 12.47 0.00 44.08 3.86
5432 5673 4.353437 ACGACCTTCACGCGGTCC 62.353 66.667 12.47 0.00 46.48 4.46
5448 5689 1.535462 CCAACATCCGGAAAGTGTGAC 59.465 52.381 9.01 0.00 0.00 3.67
5457 5698 3.640029 GGAAGTACTATCCAACATCCGGA 59.360 47.826 6.61 6.61 36.92 5.14
5458 5699 3.641906 AGGAAGTACTATCCAACATCCGG 59.358 47.826 19.72 0.00 38.27 5.14
5475 5716 5.238583 ACAAGTAATTCTGAACGGAGGAAG 58.761 41.667 0.00 0.00 0.00 3.46
5477 5718 4.617530 CGACAAGTAATTCTGAACGGAGGA 60.618 45.833 0.00 0.00 0.00 3.71
5478 5719 3.612860 CGACAAGTAATTCTGAACGGAGG 59.387 47.826 0.00 0.00 0.00 4.30
5479 5720 3.060895 GCGACAAGTAATTCTGAACGGAG 59.939 47.826 0.00 0.00 0.00 4.63
5480 5721 2.991190 GCGACAAGTAATTCTGAACGGA 59.009 45.455 0.00 0.00 0.00 4.69
5481 5722 2.734606 TGCGACAAGTAATTCTGAACGG 59.265 45.455 0.00 0.00 0.00 4.44
5482 5723 3.673338 TCTGCGACAAGTAATTCTGAACG 59.327 43.478 0.00 0.00 0.00 3.95
5483 5724 5.591643 TTCTGCGACAAGTAATTCTGAAC 57.408 39.130 0.00 0.00 0.00 3.18
5484 5725 6.348458 CCATTTCTGCGACAAGTAATTCTGAA 60.348 38.462 0.00 0.00 0.00 3.02
5485 5726 5.122239 CCATTTCTGCGACAAGTAATTCTGA 59.878 40.000 0.00 0.00 0.00 3.27
5486 5727 5.122239 TCCATTTCTGCGACAAGTAATTCTG 59.878 40.000 0.00 0.00 0.00 3.02
5487 5728 5.245531 TCCATTTCTGCGACAAGTAATTCT 58.754 37.500 0.00 0.00 0.00 2.40
5488 5729 5.545658 TCCATTTCTGCGACAAGTAATTC 57.454 39.130 0.00 0.00 0.00 2.17
5489 5730 5.415701 ACATCCATTTCTGCGACAAGTAATT 59.584 36.000 0.00 0.00 0.00 1.40
5490 5731 4.943705 ACATCCATTTCTGCGACAAGTAAT 59.056 37.500 0.00 0.00 0.00 1.89
5491 5732 4.323417 ACATCCATTTCTGCGACAAGTAA 58.677 39.130 0.00 0.00 0.00 2.24
5492 5733 3.937814 ACATCCATTTCTGCGACAAGTA 58.062 40.909 0.00 0.00 0.00 2.24
5493 5734 2.783135 ACATCCATTTCTGCGACAAGT 58.217 42.857 0.00 0.00 0.00 3.16
5494 5735 4.813161 AGATACATCCATTTCTGCGACAAG 59.187 41.667 0.00 0.00 0.00 3.16
5495 5736 4.769688 AGATACATCCATTTCTGCGACAA 58.230 39.130 0.00 0.00 0.00 3.18
5496 5737 4.406648 AGATACATCCATTTCTGCGACA 57.593 40.909 0.00 0.00 0.00 4.35
5497 5738 5.773575 TCTAGATACATCCATTTCTGCGAC 58.226 41.667 0.00 0.00 0.00 5.19
5498 5739 6.015095 ACATCTAGATACATCCATTTCTGCGA 60.015 38.462 4.54 0.00 0.00 5.10
5499 5740 6.162079 ACATCTAGATACATCCATTTCTGCG 58.838 40.000 4.54 0.00 0.00 5.18
5500 5741 9.664332 AATACATCTAGATACATCCATTTCTGC 57.336 33.333 4.54 0.00 0.00 4.26
5529 5770 9.341899 GTCGCAAAAATGAATGTATCTAAAACT 57.658 29.630 0.00 0.00 0.00 2.66
5530 5771 9.123709 TGTCGCAAAAATGAATGTATCTAAAAC 57.876 29.630 0.00 0.00 0.00 2.43
5531 5772 9.684448 TTGTCGCAAAAATGAATGTATCTAAAA 57.316 25.926 0.00 0.00 0.00 1.52
5532 5773 9.340695 CTTGTCGCAAAAATGAATGTATCTAAA 57.659 29.630 0.00 0.00 0.00 1.85
5533 5774 8.511321 ACTTGTCGCAAAAATGAATGTATCTAA 58.489 29.630 0.00 0.00 0.00 2.10
5534 5775 8.039603 ACTTGTCGCAAAAATGAATGTATCTA 57.960 30.769 0.00 0.00 0.00 1.98
5535 5776 6.913170 ACTTGTCGCAAAAATGAATGTATCT 58.087 32.000 0.00 0.00 0.00 1.98
5536 5777 8.667987 TTACTTGTCGCAAAAATGAATGTATC 57.332 30.769 0.00 0.00 0.00 2.24
5537 5778 9.638239 AATTACTTGTCGCAAAAATGAATGTAT 57.362 25.926 0.00 0.00 0.00 2.29
5538 5779 9.123709 GAATTACTTGTCGCAAAAATGAATGTA 57.876 29.630 0.00 0.00 0.00 2.29
5539 5780 7.116233 GGAATTACTTGTCGCAAAAATGAATGT 59.884 33.333 0.00 0.00 0.00 2.71
5540 5781 7.447430 GGAATTACTTGTCGCAAAAATGAATG 58.553 34.615 0.00 0.00 0.00 2.67
5541 5782 6.307800 CGGAATTACTTGTCGCAAAAATGAAT 59.692 34.615 0.00 0.00 0.00 2.57
5542 5783 5.627367 CGGAATTACTTGTCGCAAAAATGAA 59.373 36.000 0.00 0.00 0.00 2.57
5543 5784 5.049336 TCGGAATTACTTGTCGCAAAAATGA 60.049 36.000 0.00 0.00 0.00 2.57
5544 5785 5.150683 TCGGAATTACTTGTCGCAAAAATG 58.849 37.500 0.00 0.00 0.00 2.32
5545 5786 5.365403 TCGGAATTACTTGTCGCAAAAAT 57.635 34.783 0.00 0.00 0.00 1.82
5546 5787 4.815040 TCGGAATTACTTGTCGCAAAAA 57.185 36.364 0.00 0.00 0.00 1.94
5547 5788 4.529446 GTTCGGAATTACTTGTCGCAAAA 58.471 39.130 0.00 0.00 0.00 2.44
5548 5789 3.363182 CGTTCGGAATTACTTGTCGCAAA 60.363 43.478 0.00 0.00 0.00 3.68
5549 5790 2.156117 CGTTCGGAATTACTTGTCGCAA 59.844 45.455 0.00 0.00 0.00 4.85
5550 5791 1.722464 CGTTCGGAATTACTTGTCGCA 59.278 47.619 0.00 0.00 0.00 5.10
5551 5792 1.060122 CCGTTCGGAATTACTTGTCGC 59.940 52.381 5.19 0.00 0.00 5.19
5552 5793 2.597305 CTCCGTTCGGAATTACTTGTCG 59.403 50.000 14.79 0.00 33.41 4.35
5553 5794 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
5554 5795 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
5555 5796 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
5556 5797 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
5557 5798 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
5558 5799 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
5559 5800 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
5560 5801 1.755380 CTACTCCCTCCGTTCGGAATT 59.245 52.381 14.79 0.00 33.41 2.17
5561 5802 1.341778 ACTACTCCCTCCGTTCGGAAT 60.342 52.381 14.79 2.09 33.41 3.01
5562 5803 0.038744 ACTACTCCCTCCGTTCGGAA 59.961 55.000 14.79 0.04 33.41 4.30
5563 5804 0.911769 TACTACTCCCTCCGTTCGGA 59.088 55.000 13.34 13.34 0.00 4.55
5564 5805 1.307097 CTACTACTCCCTCCGTTCGG 58.693 60.000 4.74 4.74 0.00 4.30
5565 5806 0.662085 GCTACTACTCCCTCCGTTCG 59.338 60.000 0.00 0.00 0.00 3.95
5566 5807 1.404748 GTGCTACTACTCCCTCCGTTC 59.595 57.143 0.00 0.00 0.00 3.95
5567 5808 1.472188 GTGCTACTACTCCCTCCGTT 58.528 55.000 0.00 0.00 0.00 4.44
5568 5809 0.395448 GGTGCTACTACTCCCTCCGT 60.395 60.000 0.00 0.00 0.00 4.69
5569 5810 0.106619 AGGTGCTACTACTCCCTCCG 60.107 60.000 0.00 0.00 0.00 4.63
5570 5811 1.404843 CAGGTGCTACTACTCCCTCC 58.595 60.000 0.00 0.00 0.00 4.30
5571 5812 0.747852 GCAGGTGCTACTACTCCCTC 59.252 60.000 0.00 0.00 38.21 4.30
5572 5813 2.903404 GCAGGTGCTACTACTCCCT 58.097 57.895 0.00 0.00 38.21 4.20
5583 5824 0.944386 TTGAGTTTCGAAGCAGGTGC 59.056 50.000 14.70 0.00 42.49 5.01
5584 5825 2.666619 GCATTGAGTTTCGAAGCAGGTG 60.667 50.000 14.70 8.21 0.00 4.00
5590 5831 2.601481 AAGCGCATTGAGTTTCGAAG 57.399 45.000 11.47 0.00 0.00 3.79
5610 5851 6.117975 GATTGCCATCCAATTATTTCCCAT 57.882 37.500 0.00 0.00 44.02 4.00
5628 5869 0.613012 AAGGGGTGCTGAAGGATTGC 60.613 55.000 0.00 0.00 0.00 3.56
5635 5876 1.836604 GGCCAAAAGGGGTGCTGAA 60.837 57.895 0.00 0.00 37.04 3.02
5636 5877 2.203625 GGCCAAAAGGGGTGCTGA 60.204 61.111 0.00 0.00 37.04 4.26
5642 5883 0.107557 GCATGAATGGCCAAAAGGGG 60.108 55.000 10.96 0.00 37.04 4.79
5644 5885 1.085501 GCGCATGAATGGCCAAAAGG 61.086 55.000 10.96 0.41 0.00 3.11
5645 5886 1.085501 GGCGCATGAATGGCCAAAAG 61.086 55.000 10.96 0.00 41.10 2.27
5646 5887 1.079266 GGCGCATGAATGGCCAAAA 60.079 52.632 10.96 0.00 41.10 2.44
5647 5888 2.281295 TGGCGCATGAATGGCCAAA 61.281 52.632 10.96 0.00 45.00 3.28
5649 5890 2.281295 TTTGGCGCATGAATGGCCA 61.281 52.632 8.56 8.56 45.72 5.36
5650 5891 1.810853 GTTTGGCGCATGAATGGCC 60.811 57.895 10.83 13.01 41.51 5.36
5651 5892 1.079956 TGTTTGGCGCATGAATGGC 60.080 52.632 10.83 0.00 0.00 4.40
5652 5893 0.038435 TGTGTTTGGCGCATGAATGG 60.038 50.000 10.83 0.00 31.84 3.16
5653 5894 1.780806 TTGTGTTTGGCGCATGAATG 58.219 45.000 10.83 0.00 37.45 2.67
5654 5895 2.747396 ATTGTGTTTGGCGCATGAAT 57.253 40.000 10.83 0.00 37.45 2.57
5655 5896 2.522836 AATTGTGTTTGGCGCATGAA 57.477 40.000 10.83 0.00 37.45 2.57
5656 5897 3.443329 AGATAATTGTGTTTGGCGCATGA 59.557 39.130 10.83 0.00 37.45 3.07
5657 5898 3.772932 AGATAATTGTGTTTGGCGCATG 58.227 40.909 10.83 0.00 37.45 4.06
5658 5899 4.454728 AAGATAATTGTGTTTGGCGCAT 57.545 36.364 10.83 0.00 37.45 4.73
5659 5900 3.932545 AAGATAATTGTGTTTGGCGCA 57.067 38.095 10.83 0.00 35.54 6.09
5660 5901 4.981794 AGTAAGATAATTGTGTTTGGCGC 58.018 39.130 0.00 0.00 0.00 6.53
5661 5902 7.303634 ACTAGTAAGATAATTGTGTTTGGCG 57.696 36.000 0.00 0.00 0.00 5.69
5670 5911 8.715998 CATGCAGGCTAACTAGTAAGATAATTG 58.284 37.037 0.00 0.00 0.00 2.32
5673 5914 7.597288 TCATGCAGGCTAACTAGTAAGATAA 57.403 36.000 0.00 0.00 0.00 1.75
5674 5915 6.294787 GCTCATGCAGGCTAACTAGTAAGATA 60.295 42.308 0.00 0.00 39.41 1.98
5675 5916 5.510520 GCTCATGCAGGCTAACTAGTAAGAT 60.511 44.000 0.00 0.00 39.41 2.40
5678 5919 3.706594 AGCTCATGCAGGCTAACTAGTAA 59.293 43.478 9.40 0.00 42.74 2.24
5683 5924 2.490903 CAAAAGCTCATGCAGGCTAACT 59.509 45.455 11.13 0.00 42.74 2.24
5684 5925 2.489329 TCAAAAGCTCATGCAGGCTAAC 59.511 45.455 11.13 0.00 42.74 2.34
5685 5926 2.489329 GTCAAAAGCTCATGCAGGCTAA 59.511 45.455 11.13 0.00 42.74 3.09
5690 5931 3.637998 ACTTGTCAAAAGCTCATGCAG 57.362 42.857 0.00 0.00 42.74 4.41
5693 5934 3.973657 AGCAACTTGTCAAAAGCTCATG 58.026 40.909 0.00 0.00 0.00 3.07
5694 5935 4.234530 GAGCAACTTGTCAAAAGCTCAT 57.765 40.909 20.24 0.00 45.67 2.90
5696 5937 3.978718 AGAGCAACTTGTCAAAAGCTC 57.021 42.857 18.65 18.65 46.47 4.09
5697 5938 4.676546 GAAAGAGCAACTTGTCAAAAGCT 58.323 39.130 5.94 5.94 38.98 3.74
5698 5939 3.483558 CGAAAGAGCAACTTGTCAAAAGC 59.516 43.478 0.00 0.00 38.98 3.51
5700 5941 4.394920 AGACGAAAGAGCAACTTGTCAAAA 59.605 37.500 12.73 0.00 38.98 2.44
5701 5942 3.938963 AGACGAAAGAGCAACTTGTCAAA 59.061 39.130 12.73 0.00 38.98 2.69
5702 5943 3.309682 CAGACGAAAGAGCAACTTGTCAA 59.690 43.478 12.73 0.00 38.98 3.18
5703 5944 2.866156 CAGACGAAAGAGCAACTTGTCA 59.134 45.455 12.73 0.00 38.98 3.58
5704 5945 2.866762 ACAGACGAAAGAGCAACTTGTC 59.133 45.455 0.00 0.00 38.98 3.18
5705 5946 2.906354 ACAGACGAAAGAGCAACTTGT 58.094 42.857 0.00 0.00 38.98 3.16
5718 5959 1.589803 TCAGACTCGACAACAGACGA 58.410 50.000 0.00 0.00 37.03 4.20
5728 5969 3.181494 TGACAACGTTTCTTCAGACTCGA 60.181 43.478 0.00 0.00 0.00 4.04
5730 5971 4.609336 GCATGACAACGTTTCTTCAGACTC 60.609 45.833 0.00 0.00 0.00 3.36
5731 5972 3.248602 GCATGACAACGTTTCTTCAGACT 59.751 43.478 0.00 0.00 0.00 3.24
5736 5977 2.941891 TCGCATGACAACGTTTCTTC 57.058 45.000 0.00 0.00 0.00 2.87
5746 5987 1.372582 GAAGATGGCTTCGCATGACA 58.627 50.000 0.00 0.00 40.96 3.58
5756 5997 4.737946 GCACGTACTAATCTGAAGATGGCT 60.738 45.833 0.00 0.00 34.49 4.75
5762 6003 3.364062 CGGAGCACGTACTAATCTGAAG 58.636 50.000 0.00 0.00 37.93 3.02
5784 6027 4.856801 AGGGCGCCGCAGTAATGG 62.857 66.667 22.54 0.00 0.00 3.16
5785 6028 3.576356 CAGGGCGCCGCAGTAATG 61.576 66.667 22.54 6.28 0.00 1.90
5786 6029 4.096003 ACAGGGCGCCGCAGTAAT 62.096 61.111 22.54 0.00 0.00 1.89
5824 6067 3.130160 CTGCCCGCCTTTCTCTGC 61.130 66.667 0.00 0.00 0.00 4.26
5825 6068 2.437359 CCTGCCCGCCTTTCTCTG 60.437 66.667 0.00 0.00 0.00 3.35
5826 6069 2.607750 TCCTGCCCGCCTTTCTCT 60.608 61.111 0.00 0.00 0.00 3.10
5827 6070 2.124942 CTCCTGCCCGCCTTTCTC 60.125 66.667 0.00 0.00 0.00 2.87
5891 6138 3.093835 TAATGGGGGAGGCCCGTG 61.094 66.667 0.00 0.00 46.66 4.94
5894 6141 2.819284 CGAGTAATGGGGGAGGCCC 61.819 68.421 0.00 0.00 44.51 5.80
5895 6142 2.829592 CGAGTAATGGGGGAGGCC 59.170 66.667 0.00 0.00 0.00 5.19
5902 6162 1.006102 CTAGGCGGCGAGTAATGGG 60.006 63.158 12.98 0.00 0.00 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.