Multiple sequence alignment - TraesCS7B01G313800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G313800 chr7B 100.000 2988 0 0 1 2988 560533730 560530743 0.000000e+00 5518
1 TraesCS7B01G313800 chr7B 95.361 194 9 0 1 194 648098246 648098439 2.890000e-80 309
2 TraesCS7B01G313800 chr7A 89.845 2324 155 27 711 2988 604397579 604395291 0.000000e+00 2909
3 TraesCS7B01G313800 chr7A 93.204 103 7 0 603 705 50389394 50389292 5.160000e-33 152
4 TraesCS7B01G313800 chr7D 88.272 2089 163 44 701 2737 524326644 524324586 0.000000e+00 2425
5 TraesCS7B01G313800 chr7D 96.392 194 7 0 1 194 321045655 321045462 1.340000e-83 320
6 TraesCS7B01G313800 chr7D 94.798 173 5 2 2774 2942 524324612 524324440 1.770000e-67 267
7 TraesCS7B01G313800 chr2D 91.117 394 26 4 307 693 13201098 13201489 2.640000e-145 525
8 TraesCS7B01G313800 chr2D 96.410 195 6 1 1 194 582187435 582187629 1.340000e-83 320
9 TraesCS7B01G313800 chr2D 95.361 194 9 0 1 194 571067356 571067163 2.890000e-80 309
10 TraesCS7B01G313800 chr3A 95.918 196 7 1 1 195 163874114 163873919 1.730000e-82 316
11 TraesCS7B01G313800 chr1D 95.897 195 7 1 1 194 461900932 461901126 6.220000e-82 315
12 TraesCS7B01G313800 chr6D 95.855 193 8 0 2 194 455633894 455634086 2.240000e-81 313
13 TraesCS7B01G313800 chr6D 80.605 397 70 6 2114 2507 409770996 409770604 1.740000e-77 300
14 TraesCS7B01G313800 chr4A 94.975 199 9 1 1 198 728114488 728114290 8.040000e-81 311
15 TraesCS7B01G313800 chr2B 95.385 195 8 1 1 194 202911363 202911557 2.890000e-80 309


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G313800 chr7B 560530743 560533730 2987 True 5518 5518 100.000 1 2988 1 chr7B.!!$R1 2987
1 TraesCS7B01G313800 chr7A 604395291 604397579 2288 True 2909 2909 89.845 711 2988 1 chr7A.!!$R2 2277
2 TraesCS7B01G313800 chr7D 524324440 524326644 2204 True 1346 2425 91.535 701 2942 2 chr7D.!!$R2 2241

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
600 601 0.035458 GGGCATCGTTAGGAGGATGG 59.965 60.0 10.08 0.0 44.43 3.51 F
648 649 0.036952 AGGACACGTGGCATCTTCTG 60.037 55.0 25.47 0.0 0.00 3.02 F
650 651 0.037326 GACACGTGGCATCTTCTGGA 60.037 55.0 18.77 0.0 0.00 3.86 F
651 652 0.036952 ACACGTGGCATCTTCTGGAG 60.037 55.0 21.57 0.0 0.00 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1712 1759 0.109086 GCTCGAGCTGAACTGTAGCA 60.109 55.000 29.88 0.0 43.53 3.49 R
1728 1775 0.179140 CGCTCTTCTCCTCACTGCTC 60.179 60.000 0.00 0.0 0.00 4.26 R
1839 1886 1.005975 GCGAGACGATCACCATTTTCG 60.006 52.381 0.00 0.0 38.76 3.46 R
2261 2319 1.198408 CAAGCACTAGACGTACACGGA 59.802 52.381 6.72 0.0 44.95 4.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.271940 CGAGCTCAGGTGAGAAGGT 58.728 57.895 15.40 0.00 44.74 3.50
19 20 0.108898 CGAGCTCAGGTGAGAAGGTG 60.109 60.000 15.40 0.00 44.74 4.00
20 21 1.261480 GAGCTCAGGTGAGAAGGTGA 58.739 55.000 9.40 0.00 44.74 4.02
21 22 1.830477 GAGCTCAGGTGAGAAGGTGAT 59.170 52.381 9.40 0.00 44.74 3.06
22 23 2.235898 GAGCTCAGGTGAGAAGGTGATT 59.764 50.000 9.40 0.00 44.74 2.57
23 24 2.235898 AGCTCAGGTGAGAAGGTGATTC 59.764 50.000 11.29 0.00 44.74 2.52
24 25 2.886081 CTCAGGTGAGAAGGTGATTCG 58.114 52.381 0.22 0.00 44.74 3.34
25 26 2.232452 CTCAGGTGAGAAGGTGATTCGT 59.768 50.000 0.22 0.00 44.74 3.85
26 27 2.231478 TCAGGTGAGAAGGTGATTCGTC 59.769 50.000 0.00 0.00 43.16 4.20
27 28 2.029020 CAGGTGAGAAGGTGATTCGTCA 60.029 50.000 0.00 0.00 43.16 4.35
28 29 2.834549 AGGTGAGAAGGTGATTCGTCAT 59.165 45.455 0.00 0.00 43.16 3.06
29 30 3.261897 AGGTGAGAAGGTGATTCGTCATT 59.738 43.478 0.00 0.00 43.16 2.57
30 31 3.619038 GGTGAGAAGGTGATTCGTCATTC 59.381 47.826 0.00 0.00 43.16 2.67
31 32 4.499183 GTGAGAAGGTGATTCGTCATTCT 58.501 43.478 7.81 7.81 43.16 2.40
32 33 4.932200 GTGAGAAGGTGATTCGTCATTCTT 59.068 41.667 8.95 0.00 43.16 2.52
33 34 5.409826 GTGAGAAGGTGATTCGTCATTCTTT 59.590 40.000 8.95 0.00 43.16 2.52
34 35 5.997746 TGAGAAGGTGATTCGTCATTCTTTT 59.002 36.000 8.95 0.00 43.16 2.27
35 36 6.147821 TGAGAAGGTGATTCGTCATTCTTTTC 59.852 38.462 8.95 0.00 43.16 2.29
36 37 6.234177 AGAAGGTGATTCGTCATTCTTTTCT 58.766 36.000 3.82 0.00 43.16 2.52
37 38 6.712547 AGAAGGTGATTCGTCATTCTTTTCTT 59.287 34.615 3.82 0.00 43.16 2.52
38 39 6.487689 AGGTGATTCGTCATTCTTTTCTTC 57.512 37.500 0.00 0.00 0.00 2.87
39 40 5.120830 AGGTGATTCGTCATTCTTTTCTTCG 59.879 40.000 0.00 0.00 0.00 3.79
40 41 5.316770 GTGATTCGTCATTCTTTTCTTCGG 58.683 41.667 0.00 0.00 0.00 4.30
41 42 4.994852 TGATTCGTCATTCTTTTCTTCGGT 59.005 37.500 0.00 0.00 0.00 4.69
42 43 4.725556 TTCGTCATTCTTTTCTTCGGTG 57.274 40.909 0.00 0.00 0.00 4.94
43 44 3.064207 TCGTCATTCTTTTCTTCGGTGG 58.936 45.455 0.00 0.00 0.00 4.61
44 45 2.412847 CGTCATTCTTTTCTTCGGTGGC 60.413 50.000 0.00 0.00 0.00 5.01
45 46 2.814336 GTCATTCTTTTCTTCGGTGGCT 59.186 45.455 0.00 0.00 0.00 4.75
46 47 4.000988 GTCATTCTTTTCTTCGGTGGCTA 58.999 43.478 0.00 0.00 0.00 3.93
47 48 4.000988 TCATTCTTTTCTTCGGTGGCTAC 58.999 43.478 0.00 0.00 0.00 3.58
48 49 3.764237 TTCTTTTCTTCGGTGGCTACT 57.236 42.857 0.00 0.00 0.00 2.57
49 50 3.040147 TCTTTTCTTCGGTGGCTACTG 57.960 47.619 1.91 1.91 34.36 2.74
50 51 2.367567 TCTTTTCTTCGGTGGCTACTGT 59.632 45.455 9.07 0.00 34.68 3.55
51 52 2.163818 TTTCTTCGGTGGCTACTGTG 57.836 50.000 9.07 3.96 34.68 3.66
52 53 0.320374 TTCTTCGGTGGCTACTGTGG 59.680 55.000 9.07 3.62 34.68 4.17
53 54 0.830444 TCTTCGGTGGCTACTGTGGT 60.830 55.000 9.07 0.00 34.68 4.16
54 55 0.670546 CTTCGGTGGCTACTGTGGTG 60.671 60.000 9.07 0.00 34.68 4.17
55 56 2.047274 CGGTGGCTACTGTGGTGG 60.047 66.667 0.00 0.00 0.00 4.61
56 57 2.879233 CGGTGGCTACTGTGGTGGT 61.879 63.158 0.00 0.00 0.00 4.16
57 58 1.302511 GGTGGCTACTGTGGTGGTG 60.303 63.158 0.00 0.00 0.00 4.17
58 59 1.966451 GTGGCTACTGTGGTGGTGC 60.966 63.158 0.00 0.00 0.00 5.01
59 60 2.359975 GGCTACTGTGGTGGTGCC 60.360 66.667 0.00 0.00 37.90 5.01
60 61 2.742372 GCTACTGTGGTGGTGCCG 60.742 66.667 0.00 0.00 41.21 5.69
61 62 2.047274 CTACTGTGGTGGTGCCGG 60.047 66.667 0.00 0.00 41.21 6.13
62 63 2.524640 TACTGTGGTGGTGCCGGA 60.525 61.111 5.05 0.00 41.21 5.14
63 64 2.507110 CTACTGTGGTGGTGCCGGAG 62.507 65.000 5.05 0.00 41.21 4.63
75 76 4.760047 CCGGAGGCAAGTGACGGG 62.760 72.222 0.00 0.00 46.14 5.28
77 78 4.329545 GGAGGCAAGTGACGGGCA 62.330 66.667 6.63 0.00 0.00 5.36
78 79 2.045926 GAGGCAAGTGACGGGCAT 60.046 61.111 6.63 0.00 0.00 4.40
79 80 1.675641 GAGGCAAGTGACGGGCATT 60.676 57.895 6.63 0.00 0.00 3.56
80 81 1.926511 GAGGCAAGTGACGGGCATTG 61.927 60.000 6.63 0.00 0.00 2.82
81 82 2.568090 GCAAGTGACGGGCATTGG 59.432 61.111 7.71 0.00 0.00 3.16
82 83 2.268076 GCAAGTGACGGGCATTGGT 61.268 57.895 7.71 0.00 0.00 3.67
83 84 1.580942 CAAGTGACGGGCATTGGTG 59.419 57.895 0.00 0.00 0.00 4.17
84 85 1.150536 AAGTGACGGGCATTGGTGT 59.849 52.632 0.00 0.00 0.00 4.16
85 86 0.889186 AAGTGACGGGCATTGGTGTC 60.889 55.000 0.00 0.00 0.00 3.67
86 87 1.599518 GTGACGGGCATTGGTGTCA 60.600 57.895 0.00 0.00 38.91 3.58
87 88 1.149401 TGACGGGCATTGGTGTCAA 59.851 52.632 0.00 0.00 38.32 3.18
88 89 0.888736 TGACGGGCATTGGTGTCAAG 60.889 55.000 0.00 0.00 38.32 3.02
89 90 2.200170 GACGGGCATTGGTGTCAAGC 62.200 60.000 0.00 0.00 36.19 4.01
90 91 1.973281 CGGGCATTGGTGTCAAGCT 60.973 57.895 0.00 0.00 36.19 3.74
91 92 1.885871 GGGCATTGGTGTCAAGCTC 59.114 57.895 0.00 0.00 36.19 4.09
92 93 0.895100 GGGCATTGGTGTCAAGCTCA 60.895 55.000 0.00 0.00 36.19 4.26
93 94 0.524862 GGCATTGGTGTCAAGCTCAG 59.475 55.000 0.00 0.00 36.19 3.35
94 95 1.527034 GCATTGGTGTCAAGCTCAGA 58.473 50.000 0.00 0.00 36.19 3.27
95 96 1.467734 GCATTGGTGTCAAGCTCAGAG 59.532 52.381 0.00 0.00 36.19 3.35
96 97 2.873245 GCATTGGTGTCAAGCTCAGAGA 60.873 50.000 0.00 0.00 36.19 3.10
97 98 3.607741 CATTGGTGTCAAGCTCAGAGAT 58.392 45.455 0.00 0.00 36.19 2.75
98 99 2.756840 TGGTGTCAAGCTCAGAGATG 57.243 50.000 0.00 0.00 0.00 2.90
99 100 1.973515 TGGTGTCAAGCTCAGAGATGT 59.026 47.619 0.00 0.00 0.00 3.06
100 101 2.369860 TGGTGTCAAGCTCAGAGATGTT 59.630 45.455 0.00 0.00 0.00 2.71
101 102 2.999355 GGTGTCAAGCTCAGAGATGTTC 59.001 50.000 0.00 0.00 0.00 3.18
102 103 3.306641 GGTGTCAAGCTCAGAGATGTTCT 60.307 47.826 0.00 0.00 36.25 3.01
115 116 7.606858 CAGAGATGTTCTGCTATCTTTTCAA 57.393 36.000 0.00 0.00 46.30 2.69
116 117 8.211116 CAGAGATGTTCTGCTATCTTTTCAAT 57.789 34.615 0.00 0.00 46.30 2.57
117 118 8.675504 CAGAGATGTTCTGCTATCTTTTCAATT 58.324 33.333 0.00 0.00 46.30 2.32
118 119 9.240734 AGAGATGTTCTGCTATCTTTTCAATTT 57.759 29.630 0.00 0.00 33.97 1.82
119 120 9.852091 GAGATGTTCTGCTATCTTTTCAATTTT 57.148 29.630 0.00 0.00 33.97 1.82
120 121 9.635520 AGATGTTCTGCTATCTTTTCAATTTTG 57.364 29.630 0.00 0.00 29.64 2.44
121 122 9.415544 GATGTTCTGCTATCTTTTCAATTTTGT 57.584 29.630 0.00 0.00 0.00 2.83
122 123 8.801715 TGTTCTGCTATCTTTTCAATTTTGTC 57.198 30.769 0.00 0.00 0.00 3.18
123 124 8.412456 TGTTCTGCTATCTTTTCAATTTTGTCA 58.588 29.630 0.00 0.00 0.00 3.58
124 125 9.415544 GTTCTGCTATCTTTTCAATTTTGTCAT 57.584 29.630 0.00 0.00 0.00 3.06
125 126 8.975410 TCTGCTATCTTTTCAATTTTGTCATG 57.025 30.769 0.00 0.00 0.00 3.07
126 127 8.579006 TCTGCTATCTTTTCAATTTTGTCATGT 58.421 29.630 0.00 0.00 0.00 3.21
127 128 8.746922 TGCTATCTTTTCAATTTTGTCATGTC 57.253 30.769 0.00 0.00 0.00 3.06
128 129 7.538334 TGCTATCTTTTCAATTTTGTCATGTCG 59.462 33.333 0.00 0.00 0.00 4.35
129 130 7.008628 GCTATCTTTTCAATTTTGTCATGTCGG 59.991 37.037 0.00 0.00 0.00 4.79
130 131 6.142818 TCTTTTCAATTTTGTCATGTCGGT 57.857 33.333 0.00 0.00 0.00 4.69
131 132 6.205784 TCTTTTCAATTTTGTCATGTCGGTC 58.794 36.000 0.00 0.00 0.00 4.79
132 133 5.766150 TTTCAATTTTGTCATGTCGGTCT 57.234 34.783 0.00 0.00 0.00 3.85
133 134 5.766150 TTCAATTTTGTCATGTCGGTCTT 57.234 34.783 0.00 0.00 0.00 3.01
134 135 5.766150 TCAATTTTGTCATGTCGGTCTTT 57.234 34.783 0.00 0.00 0.00 2.52
135 136 6.869315 TCAATTTTGTCATGTCGGTCTTTA 57.131 33.333 0.00 0.00 0.00 1.85
136 137 6.664515 TCAATTTTGTCATGTCGGTCTTTAC 58.335 36.000 0.00 0.00 0.00 2.01
137 138 4.718858 TTTTGTCATGTCGGTCTTTACG 57.281 40.909 0.00 0.00 0.00 3.18
138 139 3.374220 TTGTCATGTCGGTCTTTACGT 57.626 42.857 0.00 0.00 0.00 3.57
139 140 2.668250 TGTCATGTCGGTCTTTACGTG 58.332 47.619 0.00 0.00 34.57 4.49
140 141 2.293955 TGTCATGTCGGTCTTTACGTGA 59.706 45.455 0.00 0.00 38.87 4.35
141 142 2.937591 TCATGTCGGTCTTTACGTGAC 58.062 47.619 0.00 0.00 36.86 3.67
142 143 2.555325 TCATGTCGGTCTTTACGTGACT 59.445 45.455 0.00 0.00 36.86 3.41
143 144 3.005050 TCATGTCGGTCTTTACGTGACTT 59.995 43.478 0.00 0.00 36.86 3.01
144 145 2.734670 TGTCGGTCTTTACGTGACTTG 58.265 47.619 0.00 0.00 34.50 3.16
145 146 2.099592 TGTCGGTCTTTACGTGACTTGT 59.900 45.455 0.00 0.00 34.50 3.16
146 147 3.314913 TGTCGGTCTTTACGTGACTTGTA 59.685 43.478 0.00 0.00 34.50 2.41
147 148 3.665871 GTCGGTCTTTACGTGACTTGTAC 59.334 47.826 0.00 0.00 35.04 2.90
148 149 3.565482 TCGGTCTTTACGTGACTTGTACT 59.435 43.478 0.00 0.00 35.04 2.73
149 150 4.036734 TCGGTCTTTACGTGACTTGTACTT 59.963 41.667 0.00 0.00 35.04 2.24
150 151 4.741676 CGGTCTTTACGTGACTTGTACTTT 59.258 41.667 0.00 0.00 35.04 2.66
151 152 5.332055 CGGTCTTTACGTGACTTGTACTTTG 60.332 44.000 0.00 0.00 35.04 2.77
152 153 5.521372 GGTCTTTACGTGACTTGTACTTTGT 59.479 40.000 0.00 0.00 35.04 2.83
153 154 6.036408 GGTCTTTACGTGACTTGTACTTTGTT 59.964 38.462 0.00 0.00 35.04 2.83
154 155 7.413328 GGTCTTTACGTGACTTGTACTTTGTTT 60.413 37.037 0.00 0.00 35.04 2.83
155 156 7.959109 GTCTTTACGTGACTTGTACTTTGTTTT 59.041 33.333 0.00 0.00 0.00 2.43
156 157 8.505625 TCTTTACGTGACTTGTACTTTGTTTTT 58.494 29.630 0.00 0.00 0.00 1.94
186 187 8.763049 ATATGAATGAGACACGTATTACCATG 57.237 34.615 0.00 0.00 0.00 3.66
187 188 6.215495 TGAATGAGACACGTATTACCATGA 57.785 37.500 0.00 0.00 0.00 3.07
188 189 6.635755 TGAATGAGACACGTATTACCATGAA 58.364 36.000 0.00 0.00 0.00 2.57
189 190 7.100409 TGAATGAGACACGTATTACCATGAAA 58.900 34.615 0.00 0.00 0.00 2.69
190 191 7.604545 TGAATGAGACACGTATTACCATGAAAA 59.395 33.333 0.00 0.00 0.00 2.29
191 192 7.915293 ATGAGACACGTATTACCATGAAAAA 57.085 32.000 0.00 0.00 0.00 1.94
219 220 1.036707 TTTCGTTTGAAAGGGGCAGG 58.963 50.000 0.00 0.00 39.13 4.85
220 221 0.825840 TTCGTTTGAAAGGGGCAGGG 60.826 55.000 0.00 0.00 0.00 4.45
221 222 2.931068 CGTTTGAAAGGGGCAGGGC 61.931 63.158 0.00 0.00 0.00 5.19
222 223 1.836604 GTTTGAAAGGGGCAGGGCA 60.837 57.895 0.00 0.00 0.00 5.36
223 224 1.533753 TTTGAAAGGGGCAGGGCAG 60.534 57.895 0.00 0.00 0.00 4.85
224 225 4.684134 TGAAAGGGGCAGGGCAGC 62.684 66.667 0.00 0.00 0.00 5.25
225 226 4.684134 GAAAGGGGCAGGGCAGCA 62.684 66.667 0.00 0.00 35.83 4.41
226 227 3.970746 GAAAGGGGCAGGGCAGCAT 62.971 63.158 0.00 0.00 35.83 3.79
227 228 3.551081 AAAGGGGCAGGGCAGCATT 62.551 57.895 0.00 0.00 35.83 3.56
228 229 2.166957 AAAGGGGCAGGGCAGCATTA 62.167 55.000 0.00 0.00 35.83 1.90
229 230 2.043046 GGGGCAGGGCAGCATTAA 60.043 61.111 0.00 0.00 35.83 1.40
230 231 1.458209 GGGGCAGGGCAGCATTAAT 60.458 57.895 0.00 0.00 35.83 1.40
231 232 1.466851 GGGGCAGGGCAGCATTAATC 61.467 60.000 0.00 0.00 35.83 1.75
232 233 0.468771 GGGCAGGGCAGCATTAATCT 60.469 55.000 0.00 0.00 35.83 2.40
233 234 1.202927 GGGCAGGGCAGCATTAATCTA 60.203 52.381 0.00 0.00 35.83 1.98
234 235 2.157738 GGCAGGGCAGCATTAATCTAG 58.842 52.381 0.00 0.00 35.83 2.43
235 236 2.487986 GGCAGGGCAGCATTAATCTAGT 60.488 50.000 0.00 0.00 35.83 2.57
236 237 2.810852 GCAGGGCAGCATTAATCTAGTC 59.189 50.000 0.00 0.00 0.00 2.59
237 238 3.745480 GCAGGGCAGCATTAATCTAGTCA 60.745 47.826 0.00 0.00 0.00 3.41
238 239 3.812053 CAGGGCAGCATTAATCTAGTCAC 59.188 47.826 0.00 0.00 0.00 3.67
239 240 3.713764 AGGGCAGCATTAATCTAGTCACT 59.286 43.478 0.00 0.00 0.00 3.41
240 241 4.164988 AGGGCAGCATTAATCTAGTCACTT 59.835 41.667 0.00 0.00 0.00 3.16
241 242 4.513318 GGGCAGCATTAATCTAGTCACTTC 59.487 45.833 0.00 0.00 0.00 3.01
242 243 5.363939 GGCAGCATTAATCTAGTCACTTCT 58.636 41.667 0.00 0.00 0.00 2.85
243 244 5.465056 GGCAGCATTAATCTAGTCACTTCTC 59.535 44.000 0.00 0.00 0.00 2.87
244 245 6.279882 GCAGCATTAATCTAGTCACTTCTCT 58.720 40.000 0.00 0.00 0.00 3.10
245 246 6.760770 GCAGCATTAATCTAGTCACTTCTCTT 59.239 38.462 0.00 0.00 0.00 2.85
246 247 7.042791 GCAGCATTAATCTAGTCACTTCTCTTC 60.043 40.741 0.00 0.00 0.00 2.87
247 248 8.196771 CAGCATTAATCTAGTCACTTCTCTTCT 58.803 37.037 0.00 0.00 0.00 2.85
248 249 8.757877 AGCATTAATCTAGTCACTTCTCTTCTT 58.242 33.333 0.00 0.00 0.00 2.52
249 250 9.377312 GCATTAATCTAGTCACTTCTCTTCTTT 57.623 33.333 0.00 0.00 0.00 2.52
273 274 5.834239 TTTTCGAAACGGAATCTAGTCAC 57.166 39.130 10.79 0.00 0.00 3.67
274 275 4.778534 TTCGAAACGGAATCTAGTCACT 57.221 40.909 0.00 0.00 0.00 3.41
275 276 4.778534 TCGAAACGGAATCTAGTCACTT 57.221 40.909 0.00 0.00 0.00 3.16
276 277 4.730657 TCGAAACGGAATCTAGTCACTTC 58.269 43.478 0.00 0.00 0.00 3.01
277 278 4.458295 TCGAAACGGAATCTAGTCACTTCT 59.542 41.667 0.00 0.00 0.00 2.85
278 279 4.794246 CGAAACGGAATCTAGTCACTTCTC 59.206 45.833 0.00 0.00 0.00 2.87
279 280 4.358494 AACGGAATCTAGTCACTTCTCG 57.642 45.455 0.00 0.00 0.00 4.04
280 281 3.345414 ACGGAATCTAGTCACTTCTCGT 58.655 45.455 0.00 0.00 0.00 4.18
281 282 3.127203 ACGGAATCTAGTCACTTCTCGTG 59.873 47.826 0.00 0.00 45.18 4.35
282 283 3.487711 CGGAATCTAGTCACTTCTCGTGG 60.488 52.174 0.00 0.00 43.94 4.94
283 284 3.181485 GGAATCTAGTCACTTCTCGTGGG 60.181 52.174 0.00 0.00 43.94 4.61
284 285 2.873094 TCTAGTCACTTCTCGTGGGA 57.127 50.000 0.00 0.00 43.94 4.37
285 286 2.712709 TCTAGTCACTTCTCGTGGGAG 58.287 52.381 0.00 0.00 43.94 4.30
286 287 1.133407 CTAGTCACTTCTCGTGGGAGC 59.867 57.143 0.00 0.00 43.94 4.70
287 288 1.444553 GTCACTTCTCGTGGGAGCG 60.445 63.158 0.00 0.00 43.94 5.03
288 289 2.811317 CACTTCTCGTGGGAGCGC 60.811 66.667 0.00 0.00 40.26 5.92
289 290 2.992114 ACTTCTCGTGGGAGCGCT 60.992 61.111 11.27 11.27 40.26 5.92
290 291 2.507992 CTTCTCGTGGGAGCGCTG 60.508 66.667 18.48 0.00 40.26 5.18
291 292 2.989253 TTCTCGTGGGAGCGCTGA 60.989 61.111 18.48 3.97 40.26 4.26
292 293 3.282745 TTCTCGTGGGAGCGCTGAC 62.283 63.158 18.48 8.02 40.26 3.51
293 294 3.753434 CTCGTGGGAGCGCTGACT 61.753 66.667 18.48 0.00 32.61 3.41
294 295 3.978723 CTCGTGGGAGCGCTGACTG 62.979 68.421 18.48 4.53 32.61 3.51
296 297 3.695606 GTGGGAGCGCTGACTGGA 61.696 66.667 18.48 0.00 0.00 3.86
297 298 3.695606 TGGGAGCGCTGACTGGAC 61.696 66.667 18.48 0.00 0.00 4.02
298 299 3.695606 GGGAGCGCTGACTGGACA 61.696 66.667 18.48 0.00 0.00 4.02
299 300 2.433318 GGAGCGCTGACTGGACAC 60.433 66.667 18.48 0.00 0.00 3.67
300 301 2.807045 GAGCGCTGACTGGACACG 60.807 66.667 18.48 0.00 0.00 4.49
301 302 4.363990 AGCGCTGACTGGACACGG 62.364 66.667 10.39 0.00 0.00 4.94
303 304 4.363990 CGCTGACTGGACACGGCT 62.364 66.667 0.00 0.00 36.40 5.52
304 305 2.740055 GCTGACTGGACACGGCTG 60.740 66.667 0.00 0.00 35.76 4.85
305 306 2.740055 CTGACTGGACACGGCTGC 60.740 66.667 0.00 0.00 0.00 5.25
306 307 4.314440 TGACTGGACACGGCTGCC 62.314 66.667 9.11 9.11 0.00 4.85
317 318 4.394712 GGCTGCCGTGGCTGTAGT 62.395 66.667 17.50 0.00 42.51 2.73
318 319 3.121030 GCTGCCGTGGCTGTAGTG 61.121 66.667 17.50 1.18 42.51 2.74
319 320 2.434884 CTGCCGTGGCTGTAGTGG 60.435 66.667 12.84 0.00 42.51 4.00
320 321 4.697756 TGCCGTGGCTGTAGTGGC 62.698 66.667 12.84 0.00 45.91 5.01
321 322 4.394712 GCCGTGGCTGTAGTGGCT 62.395 66.667 2.98 0.00 42.44 4.75
322 323 2.434884 CCGTGGCTGTAGTGGCTG 60.435 66.667 0.00 0.00 0.00 4.85
323 324 2.434884 CGTGGCTGTAGTGGCTGG 60.435 66.667 0.00 0.00 0.00 4.85
324 325 2.750350 GTGGCTGTAGTGGCTGGT 59.250 61.111 0.00 0.00 0.00 4.00
325 326 1.672356 GTGGCTGTAGTGGCTGGTG 60.672 63.158 0.00 0.00 0.00 4.17
326 327 2.747855 GGCTGTAGTGGCTGGTGC 60.748 66.667 0.00 0.00 38.76 5.01
327 328 2.348998 GCTGTAGTGGCTGGTGCT 59.651 61.111 0.00 0.00 39.59 4.40
328 329 2.037136 GCTGTAGTGGCTGGTGCTG 61.037 63.158 0.00 0.00 39.59 4.41
329 330 2.032528 TGTAGTGGCTGGTGCTGC 59.967 61.111 0.00 0.00 39.59 5.25
330 331 2.747855 GTAGTGGCTGGTGCTGCC 60.748 66.667 0.00 0.00 46.46 4.85
337 338 2.816958 CTGGTGCTGCCGTGCTAG 60.817 66.667 0.00 0.00 41.21 3.42
338 339 3.300934 CTGGTGCTGCCGTGCTAGA 62.301 63.158 0.00 0.00 41.21 2.43
339 340 2.187946 GGTGCTGCCGTGCTAGAT 59.812 61.111 0.00 0.00 0.00 1.98
340 341 1.884926 GGTGCTGCCGTGCTAGATC 60.885 63.158 0.00 0.00 0.00 2.75
341 342 2.104928 TGCTGCCGTGCTAGATCG 59.895 61.111 0.00 0.00 0.00 3.69
342 343 2.413351 GCTGCCGTGCTAGATCGA 59.587 61.111 0.00 0.00 0.00 3.59
343 344 1.659954 GCTGCCGTGCTAGATCGAG 60.660 63.158 0.00 0.00 0.00 4.04
344 345 1.730487 CTGCCGTGCTAGATCGAGT 59.270 57.895 4.67 0.00 0.00 4.18
345 346 0.945099 CTGCCGTGCTAGATCGAGTA 59.055 55.000 4.67 0.00 0.00 2.59
346 347 1.537638 CTGCCGTGCTAGATCGAGTAT 59.462 52.381 4.67 0.00 0.00 2.12
347 348 2.742589 CTGCCGTGCTAGATCGAGTATA 59.257 50.000 4.67 0.00 0.00 1.47
348 349 2.483106 TGCCGTGCTAGATCGAGTATAC 59.517 50.000 4.67 0.00 0.00 1.47
349 350 2.474196 GCCGTGCTAGATCGAGTATACG 60.474 54.545 16.27 16.27 0.00 3.06
350 351 2.093941 CCGTGCTAGATCGAGTATACGG 59.906 54.545 22.69 22.69 42.89 4.02
351 352 2.735663 CGTGCTAGATCGAGTATACGGT 59.264 50.000 15.77 0.00 0.00 4.83
352 353 3.181532 CGTGCTAGATCGAGTATACGGTC 60.182 52.174 15.77 0.00 42.74 4.79
353 354 2.991866 TGCTAGATCGAGTATACGGTCG 59.008 50.000 7.93 7.93 46.25 4.79
354 355 2.348059 GCTAGATCGAGTATACGGTCGG 59.652 54.545 12.86 2.58 46.25 4.79
355 356 1.155042 AGATCGAGTATACGGTCGGC 58.845 55.000 12.86 7.20 46.25 5.54
356 357 0.167689 GATCGAGTATACGGTCGGCC 59.832 60.000 12.86 0.00 36.81 6.13
357 358 1.239968 ATCGAGTATACGGTCGGCCC 61.240 60.000 12.86 0.00 36.81 5.80
370 371 4.171103 GGCCCGGGCTGTCGTATT 62.171 66.667 42.70 0.00 41.60 1.89
371 372 2.124860 GCCCGGGCTGTCGTATTT 60.125 61.111 38.76 0.00 38.26 1.40
372 373 1.747745 GCCCGGGCTGTCGTATTTT 60.748 57.895 38.76 0.00 38.26 1.82
373 374 1.988834 GCCCGGGCTGTCGTATTTTG 61.989 60.000 38.76 0.00 38.26 2.44
374 375 1.427819 CCGGGCTGTCGTATTTTGC 59.572 57.895 0.00 0.00 0.00 3.68
375 376 1.302383 CCGGGCTGTCGTATTTTGCA 61.302 55.000 0.00 0.00 0.00 4.08
376 377 0.096976 CGGGCTGTCGTATTTTGCAG 59.903 55.000 0.00 0.00 0.00 4.41
377 378 1.448985 GGGCTGTCGTATTTTGCAGA 58.551 50.000 0.00 0.00 0.00 4.26
378 379 1.398390 GGGCTGTCGTATTTTGCAGAG 59.602 52.381 0.00 0.00 0.00 3.35
379 380 2.346803 GGCTGTCGTATTTTGCAGAGA 58.653 47.619 0.00 0.00 0.00 3.10
380 381 2.349886 GGCTGTCGTATTTTGCAGAGAG 59.650 50.000 0.00 0.00 0.00 3.20
381 382 2.349886 GCTGTCGTATTTTGCAGAGAGG 59.650 50.000 0.00 0.00 0.00 3.69
382 383 2.932614 CTGTCGTATTTTGCAGAGAGGG 59.067 50.000 0.00 0.00 0.00 4.30
383 384 2.565391 TGTCGTATTTTGCAGAGAGGGA 59.435 45.455 0.00 0.00 0.00 4.20
384 385 3.190874 GTCGTATTTTGCAGAGAGGGAG 58.809 50.000 0.00 0.00 0.00 4.30
385 386 1.936547 CGTATTTTGCAGAGAGGGAGC 59.063 52.381 0.00 0.00 0.00 4.70
386 387 1.936547 GTATTTTGCAGAGAGGGAGCG 59.063 52.381 0.00 0.00 0.00 5.03
387 388 1.028868 ATTTTGCAGAGAGGGAGCGC 61.029 55.000 0.00 0.00 0.00 5.92
388 389 2.395988 TTTTGCAGAGAGGGAGCGCA 62.396 55.000 11.47 0.00 0.00 6.09
389 390 3.596066 TTGCAGAGAGGGAGCGCAC 62.596 63.158 11.47 1.97 31.10 5.34
390 391 3.768922 GCAGAGAGGGAGCGCACT 61.769 66.667 11.47 4.20 0.00 4.40
391 392 2.183811 CAGAGAGGGAGCGCACTG 59.816 66.667 11.47 3.49 0.00 3.66
392 393 3.073735 AGAGAGGGAGCGCACTGG 61.074 66.667 11.47 0.00 0.00 4.00
393 394 3.386237 GAGAGGGAGCGCACTGGT 61.386 66.667 11.47 0.00 0.00 4.00
394 395 3.363844 GAGAGGGAGCGCACTGGTC 62.364 68.421 11.47 0.00 44.49 4.02
395 396 4.803426 GAGGGAGCGCACTGGTCG 62.803 72.222 11.47 0.00 46.20 4.79
432 433 4.838152 CCCACCACCGGCTCGATG 62.838 72.222 0.00 0.00 0.00 3.84
433 434 4.838152 CCACCACCGGCTCGATGG 62.838 72.222 0.00 3.34 39.57 3.51
434 435 3.770040 CACCACCGGCTCGATGGA 61.770 66.667 14.59 0.00 36.94 3.41
435 436 3.461773 ACCACCGGCTCGATGGAG 61.462 66.667 14.59 0.00 43.46 3.86
436 437 3.461773 CCACCGGCTCGATGGAGT 61.462 66.667 0.00 0.00 42.53 3.85
437 438 2.125326 CCACCGGCTCGATGGAGTA 61.125 63.158 0.00 0.00 42.53 2.59
438 439 1.360551 CACCGGCTCGATGGAGTAG 59.639 63.158 0.00 1.16 42.53 2.57
439 440 2.336809 CCGGCTCGATGGAGTAGC 59.663 66.667 6.60 0.00 42.53 3.58
441 442 2.336809 GGCTCGATGGAGTAGCCG 59.663 66.667 6.60 0.00 45.82 5.52
442 443 2.355244 GCTCGATGGAGTAGCCGC 60.355 66.667 6.60 0.00 42.53 6.53
443 444 2.851071 GCTCGATGGAGTAGCCGCT 61.851 63.158 6.60 0.00 42.53 5.52
444 445 1.284408 CTCGATGGAGTAGCCGCTC 59.716 63.158 0.00 0.00 40.66 5.03
450 451 4.208686 GAGTAGCCGCTCCCGTGG 62.209 72.222 0.00 0.00 43.83 4.94
456 457 3.458163 CCGCTCCCGTGGCTTCTA 61.458 66.667 0.00 0.00 33.35 2.10
457 458 2.797278 CCGCTCCCGTGGCTTCTAT 61.797 63.158 0.00 0.00 33.35 1.98
458 459 1.592669 CGCTCCCGTGGCTTCTATG 60.593 63.158 0.00 0.00 0.00 2.23
459 460 1.889573 GCTCCCGTGGCTTCTATGC 60.890 63.158 0.00 0.00 0.00 3.14
468 469 2.611012 GCTTCTATGCCTCTTCCGC 58.389 57.895 0.00 0.00 0.00 5.54
469 470 0.882484 GCTTCTATGCCTCTTCCGCC 60.882 60.000 0.00 0.00 0.00 6.13
470 471 0.250081 CTTCTATGCCTCTTCCGCCC 60.250 60.000 0.00 0.00 0.00 6.13
471 472 1.696097 TTCTATGCCTCTTCCGCCCC 61.696 60.000 0.00 0.00 0.00 5.80
472 473 2.040884 TATGCCTCTTCCGCCCCT 60.041 61.111 0.00 0.00 0.00 4.79
473 474 1.692749 TATGCCTCTTCCGCCCCTT 60.693 57.895 0.00 0.00 0.00 3.95
474 475 1.983119 TATGCCTCTTCCGCCCCTTG 61.983 60.000 0.00 0.00 0.00 3.61
475 476 4.035102 GCCTCTTCCGCCCCTTGT 62.035 66.667 0.00 0.00 0.00 3.16
476 477 2.269241 CCTCTTCCGCCCCTTGTC 59.731 66.667 0.00 0.00 0.00 3.18
477 478 2.125512 CTCTTCCGCCCCTTGTCG 60.126 66.667 0.00 0.00 0.00 4.35
478 479 2.920912 TCTTCCGCCCCTTGTCGT 60.921 61.111 0.00 0.00 0.00 4.34
479 480 1.601419 CTCTTCCGCCCCTTGTCGTA 61.601 60.000 0.00 0.00 0.00 3.43
480 481 0.974010 TCTTCCGCCCCTTGTCGTAT 60.974 55.000 0.00 0.00 0.00 3.06
481 482 0.529992 CTTCCGCCCCTTGTCGTATC 60.530 60.000 0.00 0.00 0.00 2.24
482 483 2.279252 CCGCCCCTTGTCGTATCG 60.279 66.667 0.00 0.00 0.00 2.92
483 484 2.279252 CGCCCCTTGTCGTATCGG 60.279 66.667 0.00 0.00 0.00 4.18
484 485 2.108362 GCCCCTTGTCGTATCGGG 59.892 66.667 0.00 0.00 36.78 5.14
485 486 2.728435 GCCCCTTGTCGTATCGGGT 61.728 63.158 0.00 0.00 36.04 5.28
486 487 1.143183 CCCCTTGTCGTATCGGGTG 59.857 63.158 0.00 0.00 34.81 4.61
487 488 1.610554 CCCCTTGTCGTATCGGGTGT 61.611 60.000 0.00 0.00 34.81 4.16
488 489 0.459585 CCCTTGTCGTATCGGGTGTG 60.460 60.000 0.00 0.00 31.89 3.82
489 490 0.245539 CCTTGTCGTATCGGGTGTGT 59.754 55.000 0.00 0.00 0.00 3.72
490 491 1.346365 CTTGTCGTATCGGGTGTGTG 58.654 55.000 0.00 0.00 0.00 3.82
491 492 0.960286 TTGTCGTATCGGGTGTGTGA 59.040 50.000 0.00 0.00 0.00 3.58
492 493 1.179152 TGTCGTATCGGGTGTGTGAT 58.821 50.000 0.00 0.00 0.00 3.06
493 494 1.546923 TGTCGTATCGGGTGTGTGATT 59.453 47.619 0.00 0.00 0.00 2.57
494 495 2.028839 TGTCGTATCGGGTGTGTGATTT 60.029 45.455 0.00 0.00 0.00 2.17
495 496 2.997986 GTCGTATCGGGTGTGTGATTTT 59.002 45.455 0.00 0.00 0.00 1.82
496 497 3.434299 GTCGTATCGGGTGTGTGATTTTT 59.566 43.478 0.00 0.00 0.00 1.94
497 498 3.433957 TCGTATCGGGTGTGTGATTTTTG 59.566 43.478 0.00 0.00 0.00 2.44
498 499 3.187637 CGTATCGGGTGTGTGATTTTTGT 59.812 43.478 0.00 0.00 0.00 2.83
499 500 3.915437 ATCGGGTGTGTGATTTTTGTC 57.085 42.857 0.00 0.00 0.00 3.18
500 501 1.950909 TCGGGTGTGTGATTTTTGTCC 59.049 47.619 0.00 0.00 0.00 4.02
501 502 1.334599 CGGGTGTGTGATTTTTGTCCG 60.335 52.381 0.00 0.00 0.00 4.79
502 503 1.601914 GGGTGTGTGATTTTTGTCCGC 60.602 52.381 0.00 0.00 0.00 5.54
503 504 1.601914 GGTGTGTGATTTTTGTCCGCC 60.602 52.381 0.00 0.00 0.00 6.13
504 505 1.336755 GTGTGTGATTTTTGTCCGCCT 59.663 47.619 0.00 0.00 0.00 5.52
505 506 1.336440 TGTGTGATTTTTGTCCGCCTG 59.664 47.619 0.00 0.00 0.00 4.85
506 507 0.313672 TGTGATTTTTGTCCGCCTGC 59.686 50.000 0.00 0.00 0.00 4.85
507 508 0.388520 GTGATTTTTGTCCGCCTGCC 60.389 55.000 0.00 0.00 0.00 4.85
508 509 0.825425 TGATTTTTGTCCGCCTGCCA 60.825 50.000 0.00 0.00 0.00 4.92
509 510 0.109132 GATTTTTGTCCGCCTGCCAG 60.109 55.000 0.00 0.00 0.00 4.85
510 511 2.158561 ATTTTTGTCCGCCTGCCAGC 62.159 55.000 0.00 0.00 0.00 4.85
511 512 3.790416 TTTTGTCCGCCTGCCAGCT 62.790 57.895 0.00 0.00 0.00 4.24
512 513 4.704833 TTGTCCGCCTGCCAGCTC 62.705 66.667 0.00 0.00 0.00 4.09
534 535 4.175337 GACATGGGCGGCAGGCTA 62.175 66.667 12.47 4.30 42.94 3.93
535 536 4.181010 ACATGGGCGGCAGGCTAG 62.181 66.667 12.47 3.26 42.94 3.42
536 537 3.865383 CATGGGCGGCAGGCTAGA 61.865 66.667 12.47 0.00 42.94 2.43
537 538 3.866582 ATGGGCGGCAGGCTAGAC 61.867 66.667 12.47 0.00 42.94 2.59
540 541 4.577246 GGCGGCAGGCTAGACGAG 62.577 72.222 14.89 0.00 44.57 4.18
549 550 2.718731 CTAGACGAGCAGCGGAGG 59.281 66.667 4.06 0.00 46.49 4.30
550 551 3.477224 CTAGACGAGCAGCGGAGGC 62.477 68.421 4.06 0.00 46.49 4.70
555 556 3.518998 GAGCAGCGGAGGCGACTA 61.519 66.667 0.00 0.00 44.43 2.59
556 557 3.477224 GAGCAGCGGAGGCGACTAG 62.477 68.421 0.00 0.00 44.43 2.57
557 558 3.518998 GCAGCGGAGGCGACTAGA 61.519 66.667 0.00 0.00 44.43 2.43
558 559 2.851071 GCAGCGGAGGCGACTAGAT 61.851 63.158 0.00 0.00 44.43 1.98
559 560 1.284408 CAGCGGAGGCGACTAGATC 59.716 63.158 0.00 0.00 44.43 2.75
570 571 2.376915 GACTAGATCGACGAGTGCTG 57.623 55.000 3.01 0.00 34.77 4.41
571 572 1.003331 GACTAGATCGACGAGTGCTGG 60.003 57.143 3.01 5.44 34.77 4.85
572 573 0.317436 CTAGATCGACGAGTGCTGGC 60.317 60.000 3.01 0.00 0.00 4.85
573 574 2.048312 TAGATCGACGAGTGCTGGCG 62.048 60.000 3.01 0.00 0.00 5.69
574 575 4.498520 ATCGACGAGTGCTGGCGG 62.499 66.667 3.01 0.00 0.00 6.13
591 592 4.849310 GCGGGCTGGGCATCGTTA 62.849 66.667 0.00 0.00 0.00 3.18
592 593 2.588877 CGGGCTGGGCATCGTTAG 60.589 66.667 0.00 0.00 0.00 2.34
593 594 2.203209 GGGCTGGGCATCGTTAGG 60.203 66.667 0.00 0.00 0.00 2.69
594 595 2.742116 GGGCTGGGCATCGTTAGGA 61.742 63.158 0.00 0.00 0.00 2.94
595 596 1.227674 GGCTGGGCATCGTTAGGAG 60.228 63.158 0.00 0.00 0.00 3.69
596 597 1.227674 GCTGGGCATCGTTAGGAGG 60.228 63.158 0.00 0.00 0.00 4.30
597 598 1.686325 GCTGGGCATCGTTAGGAGGA 61.686 60.000 0.00 0.00 0.00 3.71
598 599 1.051812 CTGGGCATCGTTAGGAGGAT 58.948 55.000 0.00 0.00 0.00 3.24
599 600 0.758734 TGGGCATCGTTAGGAGGATG 59.241 55.000 5.08 5.08 46.09 3.51
600 601 0.035458 GGGCATCGTTAGGAGGATGG 59.965 60.000 10.08 0.00 44.43 3.51
601 602 0.035458 GGCATCGTTAGGAGGATGGG 59.965 60.000 10.08 0.00 44.43 4.00
602 603 0.035458 GCATCGTTAGGAGGATGGGG 59.965 60.000 10.08 0.00 44.43 4.96
603 604 1.717032 CATCGTTAGGAGGATGGGGA 58.283 55.000 2.13 0.00 41.94 4.81
604 605 2.047061 CATCGTTAGGAGGATGGGGAA 58.953 52.381 2.13 0.00 41.94 3.97
605 606 1.789523 TCGTTAGGAGGATGGGGAAG 58.210 55.000 0.00 0.00 0.00 3.46
606 607 1.289830 TCGTTAGGAGGATGGGGAAGA 59.710 52.381 0.00 0.00 0.00 2.87
607 608 2.116238 CGTTAGGAGGATGGGGAAGAA 58.884 52.381 0.00 0.00 0.00 2.52
608 609 2.504175 CGTTAGGAGGATGGGGAAGAAA 59.496 50.000 0.00 0.00 0.00 2.52
609 610 3.054655 CGTTAGGAGGATGGGGAAGAAAA 60.055 47.826 0.00 0.00 0.00 2.29
610 611 4.527944 GTTAGGAGGATGGGGAAGAAAAG 58.472 47.826 0.00 0.00 0.00 2.27
611 612 2.934722 AGGAGGATGGGGAAGAAAAGA 58.065 47.619 0.00 0.00 0.00 2.52
612 613 3.478991 AGGAGGATGGGGAAGAAAAGAT 58.521 45.455 0.00 0.00 0.00 2.40
613 614 3.203934 AGGAGGATGGGGAAGAAAAGATG 59.796 47.826 0.00 0.00 0.00 2.90
614 615 2.954989 GAGGATGGGGAAGAAAAGATGC 59.045 50.000 0.00 0.00 0.00 3.91
615 616 2.312741 AGGATGGGGAAGAAAAGATGCA 59.687 45.455 0.00 0.00 0.00 3.96
616 617 3.052338 AGGATGGGGAAGAAAAGATGCAT 60.052 43.478 0.00 0.00 0.00 3.96
617 618 3.320256 GGATGGGGAAGAAAAGATGCATC 59.680 47.826 19.37 19.37 0.00 3.91
618 619 3.454719 TGGGGAAGAAAAGATGCATCA 57.545 42.857 27.81 0.68 0.00 3.07
619 620 3.777087 TGGGGAAGAAAAGATGCATCAA 58.223 40.909 27.81 0.00 0.00 2.57
620 621 3.765511 TGGGGAAGAAAAGATGCATCAAG 59.234 43.478 27.81 0.00 0.00 3.02
621 622 4.019174 GGGGAAGAAAAGATGCATCAAGA 58.981 43.478 27.81 0.00 0.00 3.02
622 623 4.648307 GGGGAAGAAAAGATGCATCAAGAT 59.352 41.667 27.81 11.31 0.00 2.40
623 624 5.128335 GGGGAAGAAAAGATGCATCAAGATT 59.872 40.000 27.81 15.95 0.00 2.40
624 625 6.040878 GGGAAGAAAAGATGCATCAAGATTG 58.959 40.000 27.81 0.00 0.00 2.67
625 626 6.127535 GGGAAGAAAAGATGCATCAAGATTGA 60.128 38.462 27.81 0.00 42.14 2.57
637 638 4.271696 TCAAGATTGATGAAGGACACGT 57.728 40.909 0.00 0.00 31.01 4.49
638 639 3.996363 TCAAGATTGATGAAGGACACGTG 59.004 43.478 15.48 15.48 31.01 4.49
639 640 2.977914 AGATTGATGAAGGACACGTGG 58.022 47.619 21.57 1.66 0.00 4.94
640 641 1.398390 GATTGATGAAGGACACGTGGC 59.602 52.381 21.57 18.48 0.00 5.01
641 642 0.107643 TTGATGAAGGACACGTGGCA 59.892 50.000 25.47 11.40 0.00 4.92
642 643 0.324614 TGATGAAGGACACGTGGCAT 59.675 50.000 25.47 15.05 0.00 4.40
643 644 1.009829 GATGAAGGACACGTGGCATC 58.990 55.000 25.47 20.61 0.00 3.91
644 645 0.615331 ATGAAGGACACGTGGCATCT 59.385 50.000 25.47 9.32 0.00 2.90
645 646 0.396435 TGAAGGACACGTGGCATCTT 59.604 50.000 25.47 18.17 0.00 2.40
646 647 1.079503 GAAGGACACGTGGCATCTTC 58.920 55.000 25.47 22.31 0.00 2.87
647 648 0.687354 AAGGACACGTGGCATCTTCT 59.313 50.000 25.47 7.61 0.00 2.85
648 649 0.036952 AGGACACGTGGCATCTTCTG 60.037 55.000 25.47 0.00 0.00 3.02
649 650 1.021390 GGACACGTGGCATCTTCTGG 61.021 60.000 25.47 0.00 0.00 3.86
650 651 0.037326 GACACGTGGCATCTTCTGGA 60.037 55.000 18.77 0.00 0.00 3.86
651 652 0.036952 ACACGTGGCATCTTCTGGAG 60.037 55.000 21.57 0.00 0.00 3.86
652 653 0.247460 CACGTGGCATCTTCTGGAGA 59.753 55.000 7.95 0.00 39.13 3.71
653 654 0.534412 ACGTGGCATCTTCTGGAGAG 59.466 55.000 0.00 0.00 37.93 3.20
654 655 0.179089 CGTGGCATCTTCTGGAGAGG 60.179 60.000 0.00 0.00 37.93 3.69
655 656 0.179936 GTGGCATCTTCTGGAGAGGG 59.820 60.000 0.00 0.00 37.93 4.30
656 657 0.252881 TGGCATCTTCTGGAGAGGGT 60.253 55.000 0.00 0.00 37.93 4.34
657 658 0.467804 GGCATCTTCTGGAGAGGGTC 59.532 60.000 0.00 0.00 37.93 4.46
658 659 1.494960 GCATCTTCTGGAGAGGGTCT 58.505 55.000 0.00 0.00 37.93 3.85
659 660 1.836802 GCATCTTCTGGAGAGGGTCTT 59.163 52.381 0.00 0.00 37.93 3.01
660 661 3.034635 GCATCTTCTGGAGAGGGTCTTA 58.965 50.000 0.00 0.00 37.93 2.10
661 662 3.181470 GCATCTTCTGGAGAGGGTCTTAC 60.181 52.174 0.00 0.00 37.93 2.34
662 663 3.103080 TCTTCTGGAGAGGGTCTTACC 57.897 52.381 0.00 0.00 37.60 2.85
663 664 2.382305 TCTTCTGGAGAGGGTCTTACCA 59.618 50.000 0.00 0.00 41.02 3.25
664 665 2.534042 TCTGGAGAGGGTCTTACCAG 57.466 55.000 0.00 0.00 46.33 4.00
667 668 2.752030 TGGAGAGGGTCTTACCAGATG 58.248 52.381 0.00 0.00 41.02 2.90
668 669 1.414550 GGAGAGGGTCTTACCAGATGC 59.585 57.143 0.00 0.00 41.02 3.91
669 670 1.067821 GAGAGGGTCTTACCAGATGCG 59.932 57.143 0.00 0.00 41.02 4.73
670 671 1.112113 GAGGGTCTTACCAGATGCGA 58.888 55.000 0.00 0.00 41.02 5.10
671 672 1.689273 GAGGGTCTTACCAGATGCGAT 59.311 52.381 0.00 0.00 41.02 4.58
672 673 1.414181 AGGGTCTTACCAGATGCGATG 59.586 52.381 0.00 0.00 41.02 3.84
673 674 1.139058 GGGTCTTACCAGATGCGATGT 59.861 52.381 0.00 0.00 41.02 3.06
674 675 2.205074 GGTCTTACCAGATGCGATGTG 58.795 52.381 0.00 0.00 38.42 3.21
675 676 2.159099 GGTCTTACCAGATGCGATGTGA 60.159 50.000 0.00 0.00 38.42 3.58
676 677 3.119291 GTCTTACCAGATGCGATGTGAG 58.881 50.000 0.00 0.00 0.00 3.51
677 678 3.023832 TCTTACCAGATGCGATGTGAGA 58.976 45.455 0.00 0.00 0.00 3.27
678 679 2.871182 TACCAGATGCGATGTGAGAC 57.129 50.000 0.00 0.00 0.00 3.36
679 680 0.176680 ACCAGATGCGATGTGAGACC 59.823 55.000 0.00 0.00 0.00 3.85
680 681 0.176449 CCAGATGCGATGTGAGACCA 59.824 55.000 0.00 0.00 0.00 4.02
681 682 1.568606 CAGATGCGATGTGAGACCAG 58.431 55.000 0.00 0.00 0.00 4.00
682 683 0.463204 AGATGCGATGTGAGACCAGG 59.537 55.000 0.00 0.00 0.00 4.45
683 684 0.176680 GATGCGATGTGAGACCAGGT 59.823 55.000 0.00 0.00 0.00 4.00
684 685 0.176680 ATGCGATGTGAGACCAGGTC 59.823 55.000 12.25 12.25 0.00 3.85
685 686 1.517257 GCGATGTGAGACCAGGTCG 60.517 63.158 14.32 1.95 37.67 4.79
686 687 1.883732 CGATGTGAGACCAGGTCGT 59.116 57.895 14.32 2.56 37.67 4.34
687 688 1.092348 CGATGTGAGACCAGGTCGTA 58.908 55.000 14.32 4.34 37.67 3.43
688 689 1.676529 CGATGTGAGACCAGGTCGTAT 59.323 52.381 14.32 7.22 37.67 3.06
689 690 2.876550 CGATGTGAGACCAGGTCGTATA 59.123 50.000 14.32 6.04 37.67 1.47
690 691 3.058846 CGATGTGAGACCAGGTCGTATAG 60.059 52.174 14.32 4.46 37.67 1.31
691 692 2.651455 TGTGAGACCAGGTCGTATAGG 58.349 52.381 14.32 0.00 37.67 2.57
692 693 2.240414 TGTGAGACCAGGTCGTATAGGA 59.760 50.000 14.32 0.00 37.67 2.94
693 694 3.117625 TGTGAGACCAGGTCGTATAGGAT 60.118 47.826 14.32 0.00 37.67 3.24
694 695 3.890147 GTGAGACCAGGTCGTATAGGATT 59.110 47.826 14.32 0.00 37.67 3.01
695 696 5.068636 GTGAGACCAGGTCGTATAGGATTA 58.931 45.833 14.32 0.00 37.67 1.75
696 697 5.711036 GTGAGACCAGGTCGTATAGGATTAT 59.289 44.000 14.32 0.00 37.67 1.28
697 698 6.208994 GTGAGACCAGGTCGTATAGGATTATT 59.791 42.308 14.32 0.00 37.67 1.40
698 699 6.781014 TGAGACCAGGTCGTATAGGATTATTT 59.219 38.462 14.32 0.00 37.67 1.40
699 700 7.289317 TGAGACCAGGTCGTATAGGATTATTTT 59.711 37.037 14.32 0.00 37.67 1.82
700 701 7.668492 AGACCAGGTCGTATAGGATTATTTTC 58.332 38.462 14.32 0.00 37.67 2.29
701 702 6.766429 ACCAGGTCGTATAGGATTATTTTCC 58.234 40.000 0.00 0.00 35.90 3.13
702 703 6.171213 CCAGGTCGTATAGGATTATTTTCCC 58.829 44.000 0.00 0.00 36.35 3.97
703 704 6.013639 CCAGGTCGTATAGGATTATTTTCCCT 60.014 42.308 0.00 0.00 36.35 4.20
704 705 7.097834 CAGGTCGTATAGGATTATTTTCCCTC 58.902 42.308 0.00 0.00 36.35 4.30
705 706 6.071503 AGGTCGTATAGGATTATTTTCCCTCG 60.072 42.308 0.00 0.00 36.35 4.63
864 875 4.861883 GCGGCGAGATATAGCGAA 57.138 55.556 12.98 0.00 0.00 4.70
915 930 1.876156 GACCATCTCATTCCGCATTCC 59.124 52.381 0.00 0.00 0.00 3.01
916 931 0.870393 CCATCTCATTCCGCATTCCG 59.130 55.000 0.00 0.00 0.00 4.30
917 932 0.236711 CATCTCATTCCGCATTCCGC 59.763 55.000 0.00 0.00 35.03 5.54
918 933 0.179048 ATCTCATTCCGCATTCCGCA 60.179 50.000 0.00 0.00 42.60 5.69
919 934 0.179048 TCTCATTCCGCATTCCGCAT 60.179 50.000 0.00 0.00 42.60 4.73
920 935 0.664761 CTCATTCCGCATTCCGCATT 59.335 50.000 0.00 0.00 42.60 3.56
921 936 0.662619 TCATTCCGCATTCCGCATTC 59.337 50.000 0.00 0.00 42.60 2.67
935 950 1.181786 GCATTCCGATTTCCCCACAA 58.818 50.000 0.00 0.00 0.00 3.33
971 986 2.046892 CCACCAACCTCCTGAGCG 60.047 66.667 0.00 0.00 0.00 5.03
972 987 2.583441 CCACCAACCTCCTGAGCGA 61.583 63.158 0.00 0.00 0.00 4.93
1092 1113 2.363795 CAGGAGGTCCCCGTGCTA 60.364 66.667 0.00 0.00 36.42 3.49
1094 1115 3.468140 GGAGGTCCCCGTGCTACC 61.468 72.222 0.00 0.00 0.00 3.18
1329 1362 3.321497 CGTCAAGGAGGACAAGAAGAAG 58.679 50.000 0.00 0.00 37.66 2.85
1355 1388 1.202782 CCAGAAGCAGGGGATCATCAG 60.203 57.143 0.00 0.00 0.00 2.90
1403 1436 0.095417 GCTCGGTCGATCAGCAAAAC 59.905 55.000 13.15 0.00 0.00 2.43
1419 1452 1.549203 AAACCAGCCATGCCTTGTAG 58.451 50.000 0.00 0.00 0.00 2.74
1425 1458 3.493350 CCAGCCATGCCTTGTAGTAGTAG 60.493 52.174 0.00 0.00 0.00 2.57
1428 1461 4.341520 AGCCATGCCTTGTAGTAGTAGTAC 59.658 45.833 8.04 8.04 0.00 2.73
1430 1463 5.736492 GCCATGCCTTGTAGTAGTAGTACTG 60.736 48.000 18.75 4.40 39.96 2.74
1434 1467 5.826737 TGCCTTGTAGTAGTAGTACTGATCC 59.173 44.000 18.75 6.16 39.96 3.36
1436 1469 6.054295 CCTTGTAGTAGTAGTACTGATCCGT 58.946 44.000 18.75 0.00 39.96 4.69
1437 1470 6.018098 CCTTGTAGTAGTAGTACTGATCCGTG 60.018 46.154 18.75 4.41 39.96 4.94
1438 1471 6.225981 TGTAGTAGTAGTACTGATCCGTGA 57.774 41.667 18.75 0.00 39.96 4.35
1439 1472 6.824553 TGTAGTAGTAGTACTGATCCGTGAT 58.175 40.000 18.75 0.00 39.96 3.06
1440 1473 6.704937 TGTAGTAGTAGTACTGATCCGTGATG 59.295 42.308 18.75 0.00 39.96 3.07
1441 1474 3.992260 AGTAGTACTGATCCGTGATGC 57.008 47.619 5.39 0.00 0.00 3.91
1442 1475 3.556999 AGTAGTACTGATCCGTGATGCT 58.443 45.455 5.39 0.00 0.00 3.79
1443 1476 3.954904 AGTAGTACTGATCCGTGATGCTT 59.045 43.478 5.39 0.00 0.00 3.91
1656 1700 9.639601 TCTTAACAGAACACAGATACTTACATG 57.360 33.333 0.00 0.00 0.00 3.21
1662 1706 7.279536 CAGAACACAGATACTTACATGCAGAAT 59.720 37.037 0.00 0.00 0.00 2.40
1670 1717 9.956720 AGATACTTACATGCAGAATTAATTTGC 57.043 29.630 19.68 19.68 38.30 3.68
1671 1718 9.956720 GATACTTACATGCAGAATTAATTTGCT 57.043 29.630 23.50 9.22 38.60 3.91
1674 1721 9.492973 ACTTACATGCAGAATTAATTTGCTTTT 57.507 25.926 23.50 17.15 38.60 2.27
1675 1722 9.962759 CTTACATGCAGAATTAATTTGCTTTTC 57.037 29.630 23.50 5.98 38.60 2.29
1676 1723 7.966246 ACATGCAGAATTAATTTGCTTTTCA 57.034 28.000 23.50 12.06 38.60 2.69
1677 1724 8.380743 ACATGCAGAATTAATTTGCTTTTCAA 57.619 26.923 23.50 11.61 38.60 2.69
1678 1725 8.500773 ACATGCAGAATTAATTTGCTTTTCAAG 58.499 29.630 23.50 13.97 38.60 3.02
1704 1751 7.646922 GTGCAATTTCATCTGATTTCTATCACC 59.353 37.037 0.00 0.00 35.87 4.02
1709 1756 8.818141 TTTCATCTGATTTCTATCACCGTATC 57.182 34.615 0.00 0.00 35.87 2.24
1712 1759 6.961360 TCTGATTTCTATCACCGTATCTGT 57.039 37.500 0.00 0.00 35.87 3.41
1715 1762 5.069119 TGATTTCTATCACCGTATCTGTGCT 59.931 40.000 0.00 0.00 35.87 4.40
1728 1775 1.068264 TCTGTGCTACAGTTCAGCTCG 60.068 52.381 13.59 0.00 46.03 5.03
1827 1874 3.928992 TCATCAGTTTTTCGCTCTAGCAG 59.071 43.478 2.44 0.00 42.21 4.24
1839 1886 3.799420 CGCTCTAGCAGTGGAAGAATTAC 59.201 47.826 2.44 0.00 42.21 1.89
1853 1907 6.183360 TGGAAGAATTACGAAAATGGTGATCG 60.183 38.462 0.00 0.00 42.05 3.69
1978 2032 2.684843 GCTCACCGGCAAGCTCAAG 61.685 63.158 18.78 0.00 35.60 3.02
1994 2048 3.509184 GCTCAAGGGCTTCTGAATTTTCT 59.491 43.478 0.00 0.00 0.00 2.52
1999 2053 5.190357 AGGGCTTCTGAATTTTCTGAGAT 57.810 39.130 0.00 0.00 36.67 2.75
2000 2054 4.948621 AGGGCTTCTGAATTTTCTGAGATG 59.051 41.667 0.00 0.00 36.67 2.90
2002 2056 5.066246 GGGCTTCTGAATTTTCTGAGATGAG 59.934 44.000 0.00 0.00 36.67 2.90
2007 2061 8.859236 TTCTGAATTTTCTGAGATGAGTGAAT 57.141 30.769 1.07 0.00 36.67 2.57
2008 2062 8.859236 TCTGAATTTTCTGAGATGAGTGAATT 57.141 30.769 0.00 0.00 32.42 2.17
2009 2063 8.727910 TCTGAATTTTCTGAGATGAGTGAATTG 58.272 33.333 0.00 0.00 32.42 2.32
2090 2148 2.686405 GCTTGATGATGTTCTCCATGCA 59.314 45.455 0.00 0.00 32.56 3.96
2134 2192 1.006337 TAACCACGGTTTCGACGGG 60.006 57.895 6.80 0.00 39.31 5.28
2136 2194 2.029369 CCACGGTTTCGACGGGAA 59.971 61.111 0.00 0.00 36.74 3.97
2151 2209 4.091509 CGACGGGAAAACAATCTGTTAGAG 59.908 45.833 0.00 0.00 40.14 2.43
2193 2251 5.576563 TCTTCCCCTTGTTGAGATGTAAA 57.423 39.130 0.00 0.00 0.00 2.01
2195 2253 6.003950 TCTTCCCCTTGTTGAGATGTAAAAG 58.996 40.000 0.00 0.00 0.00 2.27
2198 2256 5.070001 CCCCTTGTTGAGATGTAAAAGACA 58.930 41.667 0.00 0.00 43.97 3.41
2243 2301 5.282055 TGCAGTGTATTAGGATCTTGAGG 57.718 43.478 0.00 0.00 0.00 3.86
2246 2304 5.988561 GCAGTGTATTAGGATCTTGAGGAAG 59.011 44.000 0.00 0.00 0.00 3.46
2249 2307 8.260818 CAGTGTATTAGGATCTTGAGGAAGAAA 58.739 37.037 0.00 0.00 41.64 2.52
2252 2310 9.672673 TGTATTAGGATCTTGAGGAAGAAAAAG 57.327 33.333 0.00 0.00 41.64 2.27
2253 2311 9.674068 GTATTAGGATCTTGAGGAAGAAAAAGT 57.326 33.333 0.00 0.00 41.64 2.66
2256 2314 9.726438 TTAGGATCTTGAGGAAGAAAAAGTAAG 57.274 33.333 0.00 0.00 41.64 2.34
2260 2318 8.980481 ATCTTGAGGAAGAAAAAGTAAGTTCA 57.020 30.769 0.00 0.00 41.64 3.18
2261 2319 8.980481 TCTTGAGGAAGAAAAAGTAAGTTCAT 57.020 30.769 0.00 0.00 35.14 2.57
2263 2321 7.745620 TGAGGAAGAAAAAGTAAGTTCATCC 57.254 36.000 0.00 0.00 40.39 3.51
2264 2322 6.426937 TGAGGAAGAAAAAGTAAGTTCATCCG 59.573 38.462 0.00 0.00 43.29 4.18
2265 2323 6.296803 AGGAAGAAAAAGTAAGTTCATCCGT 58.703 36.000 0.00 0.00 43.29 4.69
2266 2324 6.204882 AGGAAGAAAAAGTAAGTTCATCCGTG 59.795 38.462 0.00 0.00 43.29 4.94
2267 2325 6.017357 GGAAGAAAAAGTAAGTTCATCCGTGT 60.017 38.462 0.00 0.00 33.39 4.49
2268 2326 7.172019 GGAAGAAAAAGTAAGTTCATCCGTGTA 59.828 37.037 0.00 0.00 33.39 2.90
2270 2328 5.834239 AAAAGTAAGTTCATCCGTGTACG 57.166 39.130 0.00 0.00 39.44 3.67
2279 2337 1.400846 CATCCGTGTACGTCTAGTGCT 59.599 52.381 0.00 0.00 36.37 4.40
2301 2359 3.974912 TGTTTGCAAGAAATTCATGCGA 58.025 36.364 16.73 12.99 43.33 5.10
2305 2363 3.825308 TGCAAGAAATTCATGCGAGTTC 58.175 40.909 16.73 0.00 43.33 3.01
2307 2365 4.022935 TGCAAGAAATTCATGCGAGTTCTT 60.023 37.500 16.73 14.48 43.33 2.52
2312 2370 1.882912 TTCATGCGAGTTCTTGCACT 58.117 45.000 15.73 4.54 45.07 4.40
2313 2371 1.432514 TCATGCGAGTTCTTGCACTC 58.567 50.000 15.73 0.00 45.07 3.51
2319 2377 3.254060 GCGAGTTCTTGCACTCAGATTA 58.746 45.455 7.12 0.00 43.11 1.75
2321 2379 4.237724 CGAGTTCTTGCACTCAGATTACA 58.762 43.478 3.31 0.00 43.11 2.41
2326 2384 7.161404 AGTTCTTGCACTCAGATTACAATGTA 58.839 34.615 0.00 0.00 0.00 2.29
2327 2385 7.826252 AGTTCTTGCACTCAGATTACAATGTAT 59.174 33.333 0.00 0.00 0.00 2.29
2331 2389 4.375405 GCACTCAGATTACAATGTATCGCG 60.375 45.833 0.00 0.00 0.00 5.87
2338 2400 4.587211 TTACAATGTATCGCGTGAAACC 57.413 40.909 5.77 0.00 0.00 3.27
2339 2401 2.418692 ACAATGTATCGCGTGAAACCA 58.581 42.857 5.77 0.00 0.00 3.67
2352 2414 4.793216 GCGTGAAACCAATGTATGTTCATC 59.207 41.667 0.00 0.00 29.81 2.92
2355 2417 6.324819 GTGAAACCAATGTATGTTCATCCTG 58.675 40.000 0.00 0.00 29.81 3.86
2359 2421 6.560003 ACCAATGTATGTTCATCCTGAGTA 57.440 37.500 0.00 0.00 0.00 2.59
2360 2422 7.141758 ACCAATGTATGTTCATCCTGAGTAT 57.858 36.000 0.00 0.00 0.00 2.12
2366 2428 6.836007 TGTATGTTCATCCTGAGTATCTGACT 59.164 38.462 0.00 0.00 42.90 3.41
2369 2431 7.282332 TGTTCATCCTGAGTATCTGACTATG 57.718 40.000 0.00 0.00 39.06 2.23
2382 2444 4.858850 TCTGACTATGGCCATCACAAATT 58.141 39.130 24.80 0.00 0.00 1.82
2395 2469 7.094377 GGCCATCACAAATTAAACTCTCACTTA 60.094 37.037 0.00 0.00 0.00 2.24
2441 2515 2.092323 GCCAGACAAGAACATAACCCC 58.908 52.381 0.00 0.00 0.00 4.95
2460 2534 5.097948 ACCCCTTAACCCAGCAAATTTAAT 58.902 37.500 0.00 0.00 0.00 1.40
2583 2657 7.715657 TGCATCTTTTGATCAAGTTACAACTT 58.284 30.769 8.41 1.47 42.63 2.66
2585 2659 9.677567 GCATCTTTTGATCAAGTTACAACTTAA 57.322 29.630 8.41 0.00 41.18 1.85
2590 2664 9.562583 TTTTGATCAAGTTACAACTTAACACAC 57.437 29.630 8.41 0.00 46.89 3.82
2613 2687 5.043903 CACTCTACATTACAAGACATCGGG 58.956 45.833 0.00 0.00 0.00 5.14
2643 2717 2.428530 GGGAAAAGGCTAGCATGAAAGG 59.571 50.000 18.24 0.00 0.00 3.11
2674 2748 9.559958 CAAGTTCTCCATGAATATGTACAAAAC 57.440 33.333 0.00 0.00 36.99 2.43
2720 2794 5.639082 CACACACAGCATGAGACATTAGTAA 59.361 40.000 0.00 0.00 39.69 2.24
2913 2990 0.096454 CACATCGAGCATGCACAGTG 59.904 55.000 21.98 17.30 35.65 3.66
2933 3014 0.890683 GCAGGCACCAAACTAATGCT 59.109 50.000 0.00 0.00 39.38 3.79
2971 3052 9.588096 TCTTCTCCTGCTAATAGATATTACACA 57.412 33.333 0.00 0.00 0.00 3.72
2983 3064 8.964533 ATAGATATTACACAGGTCCTCTCAAT 57.035 34.615 0.00 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 1.261480 TCACCTTCTCACCTGAGCTC 58.739 55.000 6.82 6.82 41.80 4.09
2 3 1.949799 ATCACCTTCTCACCTGAGCT 58.050 50.000 0.00 0.00 41.80 4.09
3 4 2.626840 GAATCACCTTCTCACCTGAGC 58.373 52.381 0.00 0.00 41.80 4.26
4 5 2.232452 ACGAATCACCTTCTCACCTGAG 59.768 50.000 0.00 0.00 43.36 3.35
5 6 2.231478 GACGAATCACCTTCTCACCTGA 59.769 50.000 0.00 0.00 0.00 3.86
6 7 2.029020 TGACGAATCACCTTCTCACCTG 60.029 50.000 0.00 0.00 0.00 4.00
7 8 2.248248 TGACGAATCACCTTCTCACCT 58.752 47.619 0.00 0.00 0.00 4.00
8 9 2.743636 TGACGAATCACCTTCTCACC 57.256 50.000 0.00 0.00 0.00 4.02
9 10 4.499183 AGAATGACGAATCACCTTCTCAC 58.501 43.478 0.00 0.00 37.79 3.51
10 11 4.808414 AGAATGACGAATCACCTTCTCA 57.192 40.909 0.00 0.00 37.79 3.27
11 12 6.370166 AGAAAAGAATGACGAATCACCTTCTC 59.630 38.462 0.00 0.00 34.48 2.87
12 13 6.234177 AGAAAAGAATGACGAATCACCTTCT 58.766 36.000 0.00 0.00 36.26 2.85
13 14 6.487689 AGAAAAGAATGACGAATCACCTTC 57.512 37.500 0.00 0.00 37.79 3.46
14 15 6.347725 CGAAGAAAAGAATGACGAATCACCTT 60.348 38.462 0.00 0.00 37.79 3.50
15 16 5.120830 CGAAGAAAAGAATGACGAATCACCT 59.879 40.000 0.00 0.00 37.79 4.00
16 17 5.316770 CGAAGAAAAGAATGACGAATCACC 58.683 41.667 0.00 0.00 37.79 4.02
17 18 5.107065 ACCGAAGAAAAGAATGACGAATCAC 60.107 40.000 0.00 0.00 37.79 3.06
18 19 4.994852 ACCGAAGAAAAGAATGACGAATCA 59.005 37.500 0.00 0.00 39.83 2.57
19 20 5.316770 CACCGAAGAAAAGAATGACGAATC 58.683 41.667 0.00 0.00 0.00 2.52
20 21 4.154195 CCACCGAAGAAAAGAATGACGAAT 59.846 41.667 0.00 0.00 0.00 3.34
21 22 3.496884 CCACCGAAGAAAAGAATGACGAA 59.503 43.478 0.00 0.00 0.00 3.85
22 23 3.064207 CCACCGAAGAAAAGAATGACGA 58.936 45.455 0.00 0.00 0.00 4.20
23 24 2.412847 GCCACCGAAGAAAAGAATGACG 60.413 50.000 0.00 0.00 0.00 4.35
24 25 2.814336 AGCCACCGAAGAAAAGAATGAC 59.186 45.455 0.00 0.00 0.00 3.06
25 26 3.140325 AGCCACCGAAGAAAAGAATGA 57.860 42.857 0.00 0.00 0.00 2.57
26 27 4.003648 AGTAGCCACCGAAGAAAAGAATG 58.996 43.478 0.00 0.00 0.00 2.67
27 28 4.003648 CAGTAGCCACCGAAGAAAAGAAT 58.996 43.478 0.00 0.00 0.00 2.40
28 29 3.181458 ACAGTAGCCACCGAAGAAAAGAA 60.181 43.478 0.00 0.00 0.00 2.52
29 30 2.367567 ACAGTAGCCACCGAAGAAAAGA 59.632 45.455 0.00 0.00 0.00 2.52
30 31 2.480419 CACAGTAGCCACCGAAGAAAAG 59.520 50.000 0.00 0.00 0.00 2.27
31 32 2.489971 CACAGTAGCCACCGAAGAAAA 58.510 47.619 0.00 0.00 0.00 2.29
32 33 1.270625 CCACAGTAGCCACCGAAGAAA 60.271 52.381 0.00 0.00 0.00 2.52
33 34 0.320374 CCACAGTAGCCACCGAAGAA 59.680 55.000 0.00 0.00 0.00 2.52
34 35 0.830444 ACCACAGTAGCCACCGAAGA 60.830 55.000 0.00 0.00 0.00 2.87
35 36 0.670546 CACCACAGTAGCCACCGAAG 60.671 60.000 0.00 0.00 0.00 3.79
36 37 1.369692 CACCACAGTAGCCACCGAA 59.630 57.895 0.00 0.00 0.00 4.30
37 38 2.579657 CCACCACAGTAGCCACCGA 61.580 63.158 0.00 0.00 0.00 4.69
38 39 2.047274 CCACCACAGTAGCCACCG 60.047 66.667 0.00 0.00 0.00 4.94
39 40 1.302511 CACCACCACAGTAGCCACC 60.303 63.158 0.00 0.00 0.00 4.61
40 41 1.966451 GCACCACCACAGTAGCCAC 60.966 63.158 0.00 0.00 0.00 5.01
41 42 2.429930 GCACCACCACAGTAGCCA 59.570 61.111 0.00 0.00 0.00 4.75
42 43 2.359975 GGCACCACCACAGTAGCC 60.360 66.667 0.00 0.00 38.86 3.93
43 44 2.742372 CGGCACCACCACAGTAGC 60.742 66.667 0.00 0.00 39.03 3.58
44 45 2.047274 CCGGCACCACCACAGTAG 60.047 66.667 0.00 0.00 39.03 2.57
45 46 2.524640 TCCGGCACCACCACAGTA 60.525 61.111 0.00 0.00 39.03 2.74
46 47 3.941188 CTCCGGCACCACCACAGT 61.941 66.667 0.00 0.00 39.03 3.55
47 48 4.704833 CCTCCGGCACCACCACAG 62.705 72.222 0.00 0.00 39.03 3.66
58 59 4.760047 CCCGTCACTTGCCTCCGG 62.760 72.222 0.00 0.00 38.39 5.14
60 61 3.628646 ATGCCCGTCACTTGCCTCC 62.629 63.158 0.00 0.00 0.00 4.30
61 62 1.675641 AATGCCCGTCACTTGCCTC 60.676 57.895 0.00 0.00 0.00 4.70
62 63 1.973281 CAATGCCCGTCACTTGCCT 60.973 57.895 0.00 0.00 0.00 4.75
63 64 2.568090 CAATGCCCGTCACTTGCC 59.432 61.111 0.00 0.00 0.00 4.52
64 65 2.268076 ACCAATGCCCGTCACTTGC 61.268 57.895 0.00 0.00 0.00 4.01
65 66 1.172180 ACACCAATGCCCGTCACTTG 61.172 55.000 0.00 0.00 0.00 3.16
66 67 0.889186 GACACCAATGCCCGTCACTT 60.889 55.000 0.00 0.00 0.00 3.16
67 68 1.302511 GACACCAATGCCCGTCACT 60.303 57.895 0.00 0.00 0.00 3.41
68 69 1.169661 TTGACACCAATGCCCGTCAC 61.170 55.000 0.00 0.00 38.07 3.67
69 70 0.888736 CTTGACACCAATGCCCGTCA 60.889 55.000 0.00 0.00 36.63 4.35
70 71 1.875963 CTTGACACCAATGCCCGTC 59.124 57.895 0.00 0.00 0.00 4.79
71 72 2.268076 GCTTGACACCAATGCCCGT 61.268 57.895 0.00 0.00 0.00 5.28
72 73 1.926511 GAGCTTGACACCAATGCCCG 61.927 60.000 0.00 0.00 31.38 6.13
73 74 0.895100 TGAGCTTGACACCAATGCCC 60.895 55.000 0.00 0.00 31.38 5.36
74 75 0.524862 CTGAGCTTGACACCAATGCC 59.475 55.000 0.00 0.00 31.38 4.40
75 76 1.467734 CTCTGAGCTTGACACCAATGC 59.532 52.381 0.00 0.00 0.00 3.56
76 77 3.049708 TCTCTGAGCTTGACACCAATG 57.950 47.619 0.00 0.00 0.00 2.82
77 78 3.008813 ACATCTCTGAGCTTGACACCAAT 59.991 43.478 12.47 0.00 0.00 3.16
78 79 2.369860 ACATCTCTGAGCTTGACACCAA 59.630 45.455 12.47 0.00 0.00 3.67
79 80 1.973515 ACATCTCTGAGCTTGACACCA 59.026 47.619 12.47 0.00 0.00 4.17
80 81 2.758736 ACATCTCTGAGCTTGACACC 57.241 50.000 12.47 0.00 0.00 4.16
81 82 3.924144 AGAACATCTCTGAGCTTGACAC 58.076 45.455 12.47 5.44 31.12 3.67
92 93 8.804912 AATTGAAAAGATAGCAGAACATCTCT 57.195 30.769 0.00 0.00 31.10 3.10
93 94 9.852091 AAAATTGAAAAGATAGCAGAACATCTC 57.148 29.630 0.00 0.00 31.10 2.75
94 95 9.635520 CAAAATTGAAAAGATAGCAGAACATCT 57.364 29.630 0.00 0.00 32.85 2.90
95 96 9.415544 ACAAAATTGAAAAGATAGCAGAACATC 57.584 29.630 0.00 0.00 0.00 3.06
96 97 9.415544 GACAAAATTGAAAAGATAGCAGAACAT 57.584 29.630 0.00 0.00 0.00 2.71
97 98 8.412456 TGACAAAATTGAAAAGATAGCAGAACA 58.588 29.630 0.00 0.00 0.00 3.18
98 99 8.801715 TGACAAAATTGAAAAGATAGCAGAAC 57.198 30.769 0.00 0.00 0.00 3.01
99 100 9.414295 CATGACAAAATTGAAAAGATAGCAGAA 57.586 29.630 0.00 0.00 0.00 3.02
100 101 8.579006 ACATGACAAAATTGAAAAGATAGCAGA 58.421 29.630 0.00 0.00 0.00 4.26
101 102 8.752766 ACATGACAAAATTGAAAAGATAGCAG 57.247 30.769 0.00 0.00 0.00 4.24
102 103 7.538334 CGACATGACAAAATTGAAAAGATAGCA 59.462 33.333 0.00 0.00 0.00 3.49
103 104 7.008628 CCGACATGACAAAATTGAAAAGATAGC 59.991 37.037 0.00 0.00 0.00 2.97
104 105 8.023128 ACCGACATGACAAAATTGAAAAGATAG 58.977 33.333 0.00 0.00 0.00 2.08
105 106 7.881142 ACCGACATGACAAAATTGAAAAGATA 58.119 30.769 0.00 0.00 0.00 1.98
106 107 6.748132 ACCGACATGACAAAATTGAAAAGAT 58.252 32.000 0.00 0.00 0.00 2.40
107 108 6.039270 AGACCGACATGACAAAATTGAAAAGA 59.961 34.615 0.00 0.00 0.00 2.52
108 109 6.208644 AGACCGACATGACAAAATTGAAAAG 58.791 36.000 0.00 0.00 0.00 2.27
109 110 6.142818 AGACCGACATGACAAAATTGAAAA 57.857 33.333 0.00 0.00 0.00 2.29
110 111 5.766150 AGACCGACATGACAAAATTGAAA 57.234 34.783 0.00 0.00 0.00 2.69
111 112 5.766150 AAGACCGACATGACAAAATTGAA 57.234 34.783 0.00 0.00 0.00 2.69
112 113 5.766150 AAAGACCGACATGACAAAATTGA 57.234 34.783 0.00 0.00 0.00 2.57
113 114 5.563751 CGTAAAGACCGACATGACAAAATTG 59.436 40.000 0.00 0.00 0.00 2.32
114 115 5.237779 ACGTAAAGACCGACATGACAAAATT 59.762 36.000 0.00 0.00 0.00 1.82
115 116 4.753107 ACGTAAAGACCGACATGACAAAAT 59.247 37.500 0.00 0.00 0.00 1.82
116 117 4.025563 CACGTAAAGACCGACATGACAAAA 60.026 41.667 0.00 0.00 0.00 2.44
117 118 3.491639 CACGTAAAGACCGACATGACAAA 59.508 43.478 0.00 0.00 0.00 2.83
118 119 3.054166 CACGTAAAGACCGACATGACAA 58.946 45.455 0.00 0.00 0.00 3.18
119 120 2.293955 TCACGTAAAGACCGACATGACA 59.706 45.455 0.00 0.00 0.00 3.58
120 121 2.660236 GTCACGTAAAGACCGACATGAC 59.340 50.000 0.00 0.00 0.00 3.06
121 122 2.555325 AGTCACGTAAAGACCGACATGA 59.445 45.455 0.00 0.00 36.68 3.07
122 123 2.942710 AGTCACGTAAAGACCGACATG 58.057 47.619 1.21 0.00 36.68 3.21
123 124 3.243636 ACAAGTCACGTAAAGACCGACAT 60.244 43.478 1.21 0.00 36.68 3.06
124 125 2.099592 ACAAGTCACGTAAAGACCGACA 59.900 45.455 1.21 0.00 36.68 4.35
125 126 2.735823 ACAAGTCACGTAAAGACCGAC 58.264 47.619 1.21 0.00 36.68 4.79
126 127 3.565482 AGTACAAGTCACGTAAAGACCGA 59.435 43.478 0.00 0.00 36.68 4.69
127 128 3.893720 AGTACAAGTCACGTAAAGACCG 58.106 45.455 0.00 0.00 36.68 4.79
128 129 5.521372 ACAAAGTACAAGTCACGTAAAGACC 59.479 40.000 0.00 0.00 36.68 3.85
129 130 6.579491 ACAAAGTACAAGTCACGTAAAGAC 57.421 37.500 0.00 0.00 36.26 3.01
130 131 7.599630 AAACAAAGTACAAGTCACGTAAAGA 57.400 32.000 0.00 0.00 0.00 2.52
131 132 8.663771 AAAAACAAAGTACAAGTCACGTAAAG 57.336 30.769 0.00 0.00 0.00 1.85
160 161 9.208022 CATGGTAATACGTGTCTCATTCATATT 57.792 33.333 0.00 0.00 0.00 1.28
161 162 8.585018 TCATGGTAATACGTGTCTCATTCATAT 58.415 33.333 0.00 0.00 0.00 1.78
162 163 7.947282 TCATGGTAATACGTGTCTCATTCATA 58.053 34.615 0.00 0.00 0.00 2.15
163 164 6.816136 TCATGGTAATACGTGTCTCATTCAT 58.184 36.000 0.00 0.00 0.00 2.57
164 165 6.215495 TCATGGTAATACGTGTCTCATTCA 57.785 37.500 0.00 0.00 0.00 2.57
165 166 7.534085 TTTCATGGTAATACGTGTCTCATTC 57.466 36.000 0.00 0.00 0.00 2.67
166 167 7.915293 TTTTCATGGTAATACGTGTCTCATT 57.085 32.000 0.00 0.00 0.00 2.57
167 168 7.915293 TTTTTCATGGTAATACGTGTCTCAT 57.085 32.000 0.00 0.00 0.00 2.90
189 190 6.944557 CTTTCAAACGAAAGGTCACTTTTT 57.055 33.333 6.99 0.00 46.51 1.94
199 200 1.000274 CCTGCCCCTTTCAAACGAAAG 60.000 52.381 7.77 7.77 46.01 2.62
200 201 1.036707 CCTGCCCCTTTCAAACGAAA 58.963 50.000 0.00 0.00 0.00 3.46
201 202 0.825840 CCCTGCCCCTTTCAAACGAA 60.826 55.000 0.00 0.00 0.00 3.85
202 203 1.228429 CCCTGCCCCTTTCAAACGA 60.228 57.895 0.00 0.00 0.00 3.85
203 204 2.931068 GCCCTGCCCCTTTCAAACG 61.931 63.158 0.00 0.00 0.00 3.60
204 205 1.820010 CTGCCCTGCCCCTTTCAAAC 61.820 60.000 0.00 0.00 0.00 2.93
205 206 1.533753 CTGCCCTGCCCCTTTCAAA 60.534 57.895 0.00 0.00 0.00 2.69
206 207 2.118076 CTGCCCTGCCCCTTTCAA 59.882 61.111 0.00 0.00 0.00 2.69
207 208 4.684134 GCTGCCCTGCCCCTTTCA 62.684 66.667 0.00 0.00 0.00 2.69
208 209 3.970746 ATGCTGCCCTGCCCCTTTC 62.971 63.158 0.00 0.00 0.00 2.62
209 210 2.166957 TAATGCTGCCCTGCCCCTTT 62.167 55.000 0.00 0.00 0.00 3.11
210 211 2.166957 TTAATGCTGCCCTGCCCCTT 62.167 55.000 0.00 0.00 0.00 3.95
211 212 1.953100 ATTAATGCTGCCCTGCCCCT 61.953 55.000 0.00 0.00 0.00 4.79
212 213 1.458209 ATTAATGCTGCCCTGCCCC 60.458 57.895 0.00 0.00 0.00 5.80
213 214 0.468771 AGATTAATGCTGCCCTGCCC 60.469 55.000 0.00 0.00 0.00 5.36
214 215 2.157738 CTAGATTAATGCTGCCCTGCC 58.842 52.381 0.00 0.00 0.00 4.85
215 216 2.810852 GACTAGATTAATGCTGCCCTGC 59.189 50.000 0.00 0.00 0.00 4.85
216 217 3.812053 GTGACTAGATTAATGCTGCCCTG 59.188 47.826 0.00 0.00 0.00 4.45
217 218 3.713764 AGTGACTAGATTAATGCTGCCCT 59.286 43.478 0.00 0.00 0.00 5.19
218 219 4.078639 AGTGACTAGATTAATGCTGCCC 57.921 45.455 0.00 0.00 0.00 5.36
219 220 5.363939 AGAAGTGACTAGATTAATGCTGCC 58.636 41.667 0.00 0.00 0.00 4.85
220 221 6.279882 AGAGAAGTGACTAGATTAATGCTGC 58.720 40.000 0.00 0.00 0.00 5.25
221 222 8.196771 AGAAGAGAAGTGACTAGATTAATGCTG 58.803 37.037 0.00 0.00 0.00 4.41
222 223 8.305046 AGAAGAGAAGTGACTAGATTAATGCT 57.695 34.615 0.00 0.00 0.00 3.79
223 224 8.940768 AAGAAGAGAAGTGACTAGATTAATGC 57.059 34.615 0.00 0.00 0.00 3.56
250 251 5.987347 AGTGACTAGATTCCGTTTCGAAAAA 59.013 36.000 13.10 3.93 0.00 1.94
251 252 5.535333 AGTGACTAGATTCCGTTTCGAAAA 58.465 37.500 13.10 0.00 0.00 2.29
252 253 5.130292 AGTGACTAGATTCCGTTTCGAAA 57.870 39.130 6.47 6.47 0.00 3.46
253 254 4.778534 AGTGACTAGATTCCGTTTCGAA 57.221 40.909 0.00 0.00 0.00 3.71
254 255 4.458295 AGAAGTGACTAGATTCCGTTTCGA 59.542 41.667 0.00 0.00 0.00 3.71
255 256 4.734917 AGAAGTGACTAGATTCCGTTTCG 58.265 43.478 0.00 0.00 0.00 3.46
256 257 4.794246 CGAGAAGTGACTAGATTCCGTTTC 59.206 45.833 0.00 0.00 0.00 2.78
257 258 4.217983 ACGAGAAGTGACTAGATTCCGTTT 59.782 41.667 0.00 0.00 30.86 3.60
258 259 3.757493 ACGAGAAGTGACTAGATTCCGTT 59.243 43.478 0.00 0.00 30.86 4.44
259 260 3.345414 ACGAGAAGTGACTAGATTCCGT 58.655 45.455 0.00 5.01 0.00 4.69
272 273 2.992114 AGCGCTCCCACGAGAAGT 60.992 61.111 2.64 0.00 38.52 3.01
273 274 2.507992 CAGCGCTCCCACGAGAAG 60.508 66.667 7.13 0.00 38.52 2.85
274 275 2.989253 TCAGCGCTCCCACGAGAA 60.989 61.111 7.13 0.00 38.52 2.87
275 276 3.749064 GTCAGCGCTCCCACGAGA 61.749 66.667 7.13 0.00 38.52 4.04
276 277 3.753434 AGTCAGCGCTCCCACGAG 61.753 66.667 7.13 0.00 39.33 4.18
277 278 4.056125 CAGTCAGCGCTCCCACGA 62.056 66.667 7.13 0.00 34.06 4.35
279 280 3.695606 TCCAGTCAGCGCTCCCAC 61.696 66.667 7.13 4.50 0.00 4.61
280 281 3.695606 GTCCAGTCAGCGCTCCCA 61.696 66.667 7.13 0.00 0.00 4.37
281 282 3.695606 TGTCCAGTCAGCGCTCCC 61.696 66.667 7.13 0.00 0.00 4.30
282 283 2.433318 GTGTCCAGTCAGCGCTCC 60.433 66.667 7.13 0.00 0.00 4.70
283 284 2.807045 CGTGTCCAGTCAGCGCTC 60.807 66.667 7.13 0.00 0.00 5.03
284 285 4.363990 CCGTGTCCAGTCAGCGCT 62.364 66.667 2.64 2.64 0.00 5.92
286 287 4.363990 AGCCGTGTCCAGTCAGCG 62.364 66.667 0.00 0.00 0.00 5.18
287 288 2.740055 CAGCCGTGTCCAGTCAGC 60.740 66.667 0.00 0.00 0.00 4.26
288 289 2.740055 GCAGCCGTGTCCAGTCAG 60.740 66.667 0.00 0.00 0.00 3.51
289 290 4.314440 GGCAGCCGTGTCCAGTCA 62.314 66.667 0.00 0.00 0.00 3.41
300 301 4.394712 ACTACAGCCACGGCAGCC 62.395 66.667 11.35 0.00 44.88 4.85
301 302 3.121030 CACTACAGCCACGGCAGC 61.121 66.667 11.35 0.00 44.88 5.25
302 303 2.434884 CCACTACAGCCACGGCAG 60.435 66.667 11.35 4.66 44.88 4.85
303 304 4.697756 GCCACTACAGCCACGGCA 62.698 66.667 11.35 0.00 44.88 5.69
304 305 4.394712 AGCCACTACAGCCACGGC 62.395 66.667 0.00 0.00 43.31 5.68
305 306 2.434884 CAGCCACTACAGCCACGG 60.435 66.667 0.00 0.00 0.00 4.94
306 307 2.434884 CCAGCCACTACAGCCACG 60.435 66.667 0.00 0.00 0.00 4.94
307 308 1.672356 CACCAGCCACTACAGCCAC 60.672 63.158 0.00 0.00 0.00 5.01
308 309 2.749682 CACCAGCCACTACAGCCA 59.250 61.111 0.00 0.00 0.00 4.75
309 310 2.747855 GCACCAGCCACTACAGCC 60.748 66.667 0.00 0.00 33.58 4.85
310 311 2.037136 CAGCACCAGCCACTACAGC 61.037 63.158 0.00 0.00 43.56 4.40
311 312 2.037136 GCAGCACCAGCCACTACAG 61.037 63.158 0.00 0.00 43.56 2.74
312 313 2.032528 GCAGCACCAGCCACTACA 59.967 61.111 0.00 0.00 43.56 2.74
320 321 2.584261 ATCTAGCACGGCAGCACCAG 62.584 60.000 0.00 0.00 39.03 4.00
321 322 2.578163 GATCTAGCACGGCAGCACCA 62.578 60.000 0.00 0.00 39.03 4.17
322 323 1.884926 GATCTAGCACGGCAGCACC 60.885 63.158 0.00 0.00 36.85 5.01
323 324 2.233654 CGATCTAGCACGGCAGCAC 61.234 63.158 0.00 0.00 36.85 4.40
324 325 2.104928 CGATCTAGCACGGCAGCA 59.895 61.111 0.00 0.00 36.85 4.41
325 326 1.659954 CTCGATCTAGCACGGCAGC 60.660 63.158 8.12 0.00 0.00 5.25
326 327 0.945099 TACTCGATCTAGCACGGCAG 59.055 55.000 8.12 0.00 0.00 4.85
327 328 1.605753 ATACTCGATCTAGCACGGCA 58.394 50.000 8.12 0.00 0.00 5.69
328 329 2.474196 CGTATACTCGATCTAGCACGGC 60.474 54.545 0.56 0.00 0.00 5.68
329 330 2.093941 CCGTATACTCGATCTAGCACGG 59.906 54.545 16.19 16.19 41.32 4.94
330 331 2.735663 ACCGTATACTCGATCTAGCACG 59.264 50.000 0.56 8.69 0.00 5.34
331 332 3.181532 CGACCGTATACTCGATCTAGCAC 60.182 52.174 8.43 0.00 31.24 4.40
332 333 2.991866 CGACCGTATACTCGATCTAGCA 59.008 50.000 8.43 0.00 31.24 3.49
333 334 2.348059 CCGACCGTATACTCGATCTAGC 59.652 54.545 14.23 0.00 31.24 3.42
334 335 2.348059 GCCGACCGTATACTCGATCTAG 59.652 54.545 14.23 0.00 31.24 2.43
335 336 2.341257 GCCGACCGTATACTCGATCTA 58.659 52.381 14.23 0.00 31.24 1.98
336 337 1.155042 GCCGACCGTATACTCGATCT 58.845 55.000 14.23 0.00 31.24 2.75
337 338 0.167689 GGCCGACCGTATACTCGATC 59.832 60.000 14.23 7.00 31.24 3.69
338 339 1.239968 GGGCCGACCGTATACTCGAT 61.240 60.000 14.23 0.00 36.48 3.59
339 340 1.893808 GGGCCGACCGTATACTCGA 60.894 63.158 14.23 0.00 36.48 4.04
340 341 2.641559 GGGCCGACCGTATACTCG 59.358 66.667 7.38 7.38 36.48 4.18
353 354 3.692370 AAATACGACAGCCCGGGCC 62.692 63.158 41.72 25.51 43.17 5.80
354 355 1.747745 AAAATACGACAGCCCGGGC 60.748 57.895 39.29 39.29 42.33 6.13
355 356 1.988834 GCAAAATACGACAGCCCGGG 61.989 60.000 19.09 19.09 0.00 5.73
356 357 1.302383 TGCAAAATACGACAGCCCGG 61.302 55.000 0.00 0.00 0.00 5.73
357 358 0.096976 CTGCAAAATACGACAGCCCG 59.903 55.000 0.00 0.00 0.00 6.13
358 359 1.398390 CTCTGCAAAATACGACAGCCC 59.602 52.381 0.00 0.00 0.00 5.19
359 360 2.346803 TCTCTGCAAAATACGACAGCC 58.653 47.619 0.00 0.00 0.00 4.85
360 361 2.349886 CCTCTCTGCAAAATACGACAGC 59.650 50.000 0.00 0.00 0.00 4.40
361 362 2.932614 CCCTCTCTGCAAAATACGACAG 59.067 50.000 0.00 0.00 0.00 3.51
362 363 2.565391 TCCCTCTCTGCAAAATACGACA 59.435 45.455 0.00 0.00 0.00 4.35
363 364 3.190874 CTCCCTCTCTGCAAAATACGAC 58.809 50.000 0.00 0.00 0.00 4.34
364 365 2.418746 GCTCCCTCTCTGCAAAATACGA 60.419 50.000 0.00 0.00 0.00 3.43
365 366 1.936547 GCTCCCTCTCTGCAAAATACG 59.063 52.381 0.00 0.00 0.00 3.06
366 367 1.936547 CGCTCCCTCTCTGCAAAATAC 59.063 52.381 0.00 0.00 0.00 1.89
367 368 1.743772 GCGCTCCCTCTCTGCAAAATA 60.744 52.381 0.00 0.00 0.00 1.40
368 369 1.028868 GCGCTCCCTCTCTGCAAAAT 61.029 55.000 0.00 0.00 0.00 1.82
369 370 1.672356 GCGCTCCCTCTCTGCAAAA 60.672 57.895 0.00 0.00 0.00 2.44
370 371 2.046892 GCGCTCCCTCTCTGCAAA 60.047 61.111 0.00 0.00 0.00 3.68
371 372 3.313524 TGCGCTCCCTCTCTGCAA 61.314 61.111 9.73 0.00 31.69 4.08
372 373 4.074526 GTGCGCTCCCTCTCTGCA 62.075 66.667 9.73 0.00 0.00 4.41
373 374 3.768922 AGTGCGCTCCCTCTCTGC 61.769 66.667 9.73 0.00 0.00 4.26
374 375 2.183811 CAGTGCGCTCCCTCTCTG 59.816 66.667 9.73 2.34 0.00 3.35
375 376 3.073735 CCAGTGCGCTCCCTCTCT 61.074 66.667 9.73 0.00 0.00 3.10
376 377 3.363844 GACCAGTGCGCTCCCTCTC 62.364 68.421 9.73 0.00 0.00 3.20
377 378 3.386237 GACCAGTGCGCTCCCTCT 61.386 66.667 9.73 0.00 0.00 3.69
378 379 4.803426 CGACCAGTGCGCTCCCTC 62.803 72.222 9.73 0.00 0.00 4.30
415 416 4.838152 CATCGAGCCGGTGGTGGG 62.838 72.222 1.90 0.00 34.00 4.61
420 421 1.360551 CTACTCCATCGAGCCGGTG 59.639 63.158 1.90 1.37 40.03 4.94
421 422 2.491022 GCTACTCCATCGAGCCGGT 61.491 63.158 1.90 0.00 40.03 5.28
422 423 2.336809 GCTACTCCATCGAGCCGG 59.663 66.667 0.00 0.00 40.03 6.13
423 424 2.336809 GGCTACTCCATCGAGCCG 59.663 66.667 0.00 0.00 45.94 5.52
425 426 2.355244 GCGGCTACTCCATCGAGC 60.355 66.667 0.00 0.00 40.03 5.03
426 427 1.284408 GAGCGGCTACTCCATCGAG 59.716 63.158 0.60 0.00 42.32 4.04
427 428 3.433319 GAGCGGCTACTCCATCGA 58.567 61.111 0.60 0.00 34.01 3.59
433 434 4.208686 CCACGGGAGCGGCTACTC 62.209 72.222 12.80 1.29 35.86 2.59
439 440 2.797278 ATAGAAGCCACGGGAGCGG 61.797 63.158 0.00 0.00 34.64 5.52
440 441 1.592669 CATAGAAGCCACGGGAGCG 60.593 63.158 0.00 0.00 34.64 5.03
441 442 1.889573 GCATAGAAGCCACGGGAGC 60.890 63.158 0.00 0.00 0.00 4.70
442 443 4.445699 GCATAGAAGCCACGGGAG 57.554 61.111 0.00 0.00 0.00 4.30
450 451 0.882484 GGCGGAAGAGGCATAGAAGC 60.882 60.000 0.00 0.00 36.61 3.86
451 452 0.250081 GGGCGGAAGAGGCATAGAAG 60.250 60.000 0.00 0.00 38.57 2.85
452 453 1.696097 GGGGCGGAAGAGGCATAGAA 61.696 60.000 0.00 0.00 38.57 2.10
453 454 2.140792 GGGGCGGAAGAGGCATAGA 61.141 63.158 0.00 0.00 38.57 1.98
454 455 1.700042 AAGGGGCGGAAGAGGCATAG 61.700 60.000 0.00 0.00 38.57 2.23
455 456 1.692749 AAGGGGCGGAAGAGGCATA 60.693 57.895 0.00 0.00 38.57 3.14
456 457 3.017581 AAGGGGCGGAAGAGGCAT 61.018 61.111 0.00 0.00 38.57 4.40
457 458 4.033776 CAAGGGGCGGAAGAGGCA 62.034 66.667 0.00 0.00 38.57 4.75
458 459 3.978571 GACAAGGGGCGGAAGAGGC 62.979 68.421 0.00 0.00 0.00 4.70
459 460 2.269241 GACAAGGGGCGGAAGAGG 59.731 66.667 0.00 0.00 0.00 3.69
460 461 1.601419 TACGACAAGGGGCGGAAGAG 61.601 60.000 0.00 0.00 0.00 2.85
461 462 0.974010 ATACGACAAGGGGCGGAAGA 60.974 55.000 0.00 0.00 0.00 2.87
462 463 0.529992 GATACGACAAGGGGCGGAAG 60.530 60.000 0.00 0.00 0.00 3.46
463 464 1.518774 GATACGACAAGGGGCGGAA 59.481 57.895 0.00 0.00 0.00 4.30
464 465 2.777972 CGATACGACAAGGGGCGGA 61.778 63.158 0.00 0.00 0.00 5.54
465 466 2.279252 CGATACGACAAGGGGCGG 60.279 66.667 0.00 0.00 0.00 6.13
466 467 2.279252 CCGATACGACAAGGGGCG 60.279 66.667 0.00 0.00 0.00 6.13
467 468 2.108362 CCCGATACGACAAGGGGC 59.892 66.667 0.00 0.00 40.18 5.80
470 471 0.245539 ACACACCCGATACGACAAGG 59.754 55.000 0.00 0.00 0.00 3.61
471 472 1.068125 TCACACACCCGATACGACAAG 60.068 52.381 0.00 0.00 0.00 3.16
472 473 0.960286 TCACACACCCGATACGACAA 59.040 50.000 0.00 0.00 0.00 3.18
473 474 1.179152 ATCACACACCCGATACGACA 58.821 50.000 0.00 0.00 0.00 4.35
474 475 2.288961 AATCACACACCCGATACGAC 57.711 50.000 0.00 0.00 0.00 4.34
475 476 3.322211 AAAATCACACACCCGATACGA 57.678 42.857 0.00 0.00 0.00 3.43
476 477 3.187637 ACAAAAATCACACACCCGATACG 59.812 43.478 0.00 0.00 0.00 3.06
477 478 4.379082 GGACAAAAATCACACACCCGATAC 60.379 45.833 0.00 0.00 0.00 2.24
478 479 3.754323 GGACAAAAATCACACACCCGATA 59.246 43.478 0.00 0.00 0.00 2.92
479 480 2.556622 GGACAAAAATCACACACCCGAT 59.443 45.455 0.00 0.00 0.00 4.18
480 481 1.950909 GGACAAAAATCACACACCCGA 59.049 47.619 0.00 0.00 0.00 5.14
481 482 1.334599 CGGACAAAAATCACACACCCG 60.335 52.381 0.00 0.00 0.00 5.28
482 483 1.601914 GCGGACAAAAATCACACACCC 60.602 52.381 0.00 0.00 0.00 4.61
483 484 1.601914 GGCGGACAAAAATCACACACC 60.602 52.381 0.00 0.00 0.00 4.16
484 485 1.336755 AGGCGGACAAAAATCACACAC 59.663 47.619 0.00 0.00 0.00 3.82
485 486 1.336440 CAGGCGGACAAAAATCACACA 59.664 47.619 0.00 0.00 0.00 3.72
486 487 1.930371 GCAGGCGGACAAAAATCACAC 60.930 52.381 0.00 0.00 0.00 3.82
487 488 0.313672 GCAGGCGGACAAAAATCACA 59.686 50.000 0.00 0.00 0.00 3.58
488 489 0.388520 GGCAGGCGGACAAAAATCAC 60.389 55.000 0.00 0.00 0.00 3.06
489 490 0.825425 TGGCAGGCGGACAAAAATCA 60.825 50.000 0.00 0.00 0.00 2.57
490 491 0.109132 CTGGCAGGCGGACAAAAATC 60.109 55.000 6.61 0.00 30.64 2.17
491 492 1.966762 CTGGCAGGCGGACAAAAAT 59.033 52.632 6.61 0.00 30.64 1.82
492 493 2.855514 GCTGGCAGGCGGACAAAAA 61.856 57.895 17.64 0.00 30.64 1.94
493 494 3.294493 GCTGGCAGGCGGACAAAA 61.294 61.111 17.64 0.00 30.64 2.44
494 495 4.269523 AGCTGGCAGGCGGACAAA 62.270 61.111 17.64 0.00 30.64 2.83
495 496 4.704833 GAGCTGGCAGGCGGACAA 62.705 66.667 17.64 0.00 30.64 3.18
517 518 4.175337 TAGCCTGCCGCCCATGTC 62.175 66.667 0.00 0.00 38.78 3.06
518 519 4.181010 CTAGCCTGCCGCCCATGT 62.181 66.667 0.00 0.00 38.78 3.21
519 520 3.865383 TCTAGCCTGCCGCCCATG 61.865 66.667 0.00 0.00 38.78 3.66
520 521 3.866582 GTCTAGCCTGCCGCCCAT 61.867 66.667 0.00 0.00 38.78 4.00
523 524 4.577246 CTCGTCTAGCCTGCCGCC 62.577 72.222 0.00 0.00 38.78 6.13
532 533 2.718731 CCTCCGCTGCTCGTCTAG 59.281 66.667 0.00 0.00 36.19 2.43
533 534 3.518998 GCCTCCGCTGCTCGTCTA 61.519 66.667 0.00 0.00 36.19 2.59
538 539 3.477224 CTAGTCGCCTCCGCTGCTC 62.477 68.421 0.00 0.00 0.00 4.26
539 540 3.522731 CTAGTCGCCTCCGCTGCT 61.523 66.667 0.00 0.00 0.00 4.24
540 541 2.741116 GATCTAGTCGCCTCCGCTGC 62.741 65.000 0.00 0.00 0.00 5.25
541 542 1.284408 GATCTAGTCGCCTCCGCTG 59.716 63.158 0.00 0.00 0.00 5.18
542 543 2.255172 CGATCTAGTCGCCTCCGCT 61.255 63.158 2.56 0.00 44.33 5.52
543 544 2.252855 CGATCTAGTCGCCTCCGC 59.747 66.667 2.56 0.00 44.33 5.54
551 552 1.003331 CCAGCACTCGTCGATCTAGTC 60.003 57.143 0.00 0.00 0.00 2.59
552 553 1.018148 CCAGCACTCGTCGATCTAGT 58.982 55.000 0.00 0.00 0.00 2.57
553 554 0.317436 GCCAGCACTCGTCGATCTAG 60.317 60.000 0.00 0.00 0.00 2.43
554 555 1.728069 GCCAGCACTCGTCGATCTA 59.272 57.895 0.00 0.00 0.00 1.98
555 556 2.492090 GCCAGCACTCGTCGATCT 59.508 61.111 0.00 0.00 0.00 2.75
556 557 2.951745 CGCCAGCACTCGTCGATC 60.952 66.667 0.00 0.00 0.00 3.69
557 558 4.498520 CCGCCAGCACTCGTCGAT 62.499 66.667 0.00 0.00 0.00 3.59
574 575 4.849310 TAACGATGCCCAGCCCGC 62.849 66.667 0.00 0.00 0.00 6.13
575 576 2.588877 CTAACGATGCCCAGCCCG 60.589 66.667 0.00 0.00 0.00 6.13
576 577 2.203209 CCTAACGATGCCCAGCCC 60.203 66.667 0.00 0.00 0.00 5.19
577 578 1.227674 CTCCTAACGATGCCCAGCC 60.228 63.158 0.00 0.00 0.00 4.85
578 579 1.227674 CCTCCTAACGATGCCCAGC 60.228 63.158 0.00 0.00 0.00 4.85
579 580 1.051812 ATCCTCCTAACGATGCCCAG 58.948 55.000 0.00 0.00 0.00 4.45
580 581 0.758734 CATCCTCCTAACGATGCCCA 59.241 55.000 0.00 0.00 30.24 5.36
581 582 0.035458 CCATCCTCCTAACGATGCCC 59.965 60.000 0.00 0.00 35.55 5.36
582 583 0.035458 CCCATCCTCCTAACGATGCC 59.965 60.000 0.00 0.00 35.55 4.40
583 584 0.035458 CCCCATCCTCCTAACGATGC 59.965 60.000 0.00 0.00 35.55 3.91
584 585 1.717032 TCCCCATCCTCCTAACGATG 58.283 55.000 0.00 0.00 36.45 3.84
585 586 2.090719 TCTTCCCCATCCTCCTAACGAT 60.091 50.000 0.00 0.00 0.00 3.73
586 587 1.289830 TCTTCCCCATCCTCCTAACGA 59.710 52.381 0.00 0.00 0.00 3.85
587 588 1.789523 TCTTCCCCATCCTCCTAACG 58.210 55.000 0.00 0.00 0.00 3.18
588 589 4.227527 TCTTTTCTTCCCCATCCTCCTAAC 59.772 45.833 0.00 0.00 0.00 2.34
589 590 4.444611 TCTTTTCTTCCCCATCCTCCTAA 58.555 43.478 0.00 0.00 0.00 2.69
590 591 4.088634 TCTTTTCTTCCCCATCCTCCTA 57.911 45.455 0.00 0.00 0.00 2.94
591 592 2.934722 TCTTTTCTTCCCCATCCTCCT 58.065 47.619 0.00 0.00 0.00 3.69
592 593 3.560105 CATCTTTTCTTCCCCATCCTCC 58.440 50.000 0.00 0.00 0.00 4.30
593 594 2.954989 GCATCTTTTCTTCCCCATCCTC 59.045 50.000 0.00 0.00 0.00 3.71
594 595 2.312741 TGCATCTTTTCTTCCCCATCCT 59.687 45.455 0.00 0.00 0.00 3.24
595 596 2.738743 TGCATCTTTTCTTCCCCATCC 58.261 47.619 0.00 0.00 0.00 3.51
596 597 3.956199 TGATGCATCTTTTCTTCCCCATC 59.044 43.478 26.32 0.00 0.00 3.51
597 598 3.985127 TGATGCATCTTTTCTTCCCCAT 58.015 40.909 26.32 0.00 0.00 4.00
598 599 3.454719 TGATGCATCTTTTCTTCCCCA 57.545 42.857 26.32 0.12 0.00 4.96
599 600 4.019174 TCTTGATGCATCTTTTCTTCCCC 58.981 43.478 26.32 0.00 0.00 4.81
600 601 5.848833 ATCTTGATGCATCTTTTCTTCCC 57.151 39.130 26.32 0.00 0.00 3.97
601 602 6.860080 TCAATCTTGATGCATCTTTTCTTCC 58.140 36.000 26.32 0.00 31.01 3.46
616 617 3.996363 CACGTGTCCTTCATCAATCTTGA 59.004 43.478 7.58 0.00 42.14 3.02
617 618 3.125829 CCACGTGTCCTTCATCAATCTTG 59.874 47.826 15.65 0.00 0.00 3.02
618 619 3.338249 CCACGTGTCCTTCATCAATCTT 58.662 45.455 15.65 0.00 0.00 2.40
619 620 2.936993 GCCACGTGTCCTTCATCAATCT 60.937 50.000 15.65 0.00 0.00 2.40
620 621 1.398390 GCCACGTGTCCTTCATCAATC 59.602 52.381 15.65 0.00 0.00 2.67
621 622 1.271325 TGCCACGTGTCCTTCATCAAT 60.271 47.619 15.65 0.00 0.00 2.57
622 623 0.107643 TGCCACGTGTCCTTCATCAA 59.892 50.000 15.65 0.00 0.00 2.57
623 624 0.324614 ATGCCACGTGTCCTTCATCA 59.675 50.000 15.65 0.00 0.00 3.07
624 625 1.009829 GATGCCACGTGTCCTTCATC 58.990 55.000 15.65 13.72 0.00 2.92
625 626 0.615331 AGATGCCACGTGTCCTTCAT 59.385 50.000 15.65 9.16 0.00 2.57
626 627 0.396435 AAGATGCCACGTGTCCTTCA 59.604 50.000 15.65 4.62 0.00 3.02
627 628 1.079503 GAAGATGCCACGTGTCCTTC 58.920 55.000 15.65 15.56 0.00 3.46
628 629 0.687354 AGAAGATGCCACGTGTCCTT 59.313 50.000 15.65 11.17 0.00 3.36
629 630 0.036952 CAGAAGATGCCACGTGTCCT 60.037 55.000 15.65 0.00 0.00 3.85
630 631 1.021390 CCAGAAGATGCCACGTGTCC 61.021 60.000 15.65 5.64 0.00 4.02
631 632 0.037326 TCCAGAAGATGCCACGTGTC 60.037 55.000 15.65 0.98 0.00 3.67
632 633 0.036952 CTCCAGAAGATGCCACGTGT 60.037 55.000 15.65 0.00 0.00 4.49
633 634 0.247460 TCTCCAGAAGATGCCACGTG 59.753 55.000 9.08 9.08 0.00 4.49
634 635 0.534412 CTCTCCAGAAGATGCCACGT 59.466 55.000 0.00 0.00 32.19 4.49
635 636 0.179089 CCTCTCCAGAAGATGCCACG 60.179 60.000 0.00 0.00 32.19 4.94
636 637 0.179936 CCCTCTCCAGAAGATGCCAC 59.820 60.000 0.00 0.00 32.19 5.01
637 638 0.252881 ACCCTCTCCAGAAGATGCCA 60.253 55.000 0.00 0.00 32.19 4.92
638 639 0.467804 GACCCTCTCCAGAAGATGCC 59.532 60.000 0.00 0.00 32.19 4.40
639 640 1.494960 AGACCCTCTCCAGAAGATGC 58.505 55.000 0.00 0.00 32.19 3.91
640 641 3.386402 GGTAAGACCCTCTCCAGAAGATG 59.614 52.174 0.00 0.00 32.19 2.90
641 642 3.012959 TGGTAAGACCCTCTCCAGAAGAT 59.987 47.826 0.00 0.00 37.50 2.40
642 643 2.382305 TGGTAAGACCCTCTCCAGAAGA 59.618 50.000 0.00 0.00 37.50 2.87
643 644 2.763448 CTGGTAAGACCCTCTCCAGAAG 59.237 54.545 3.76 0.00 45.76 2.85
644 645 2.821437 CTGGTAAGACCCTCTCCAGAA 58.179 52.381 3.76 0.00 45.76 3.02
645 646 2.534042 CTGGTAAGACCCTCTCCAGA 57.466 55.000 3.76 0.00 45.76 3.86
646 647 2.534042 TCTGGTAAGACCCTCTCCAG 57.466 55.000 0.00 0.00 44.69 3.86
647 648 2.752030 CATCTGGTAAGACCCTCTCCA 58.248 52.381 0.00 0.00 37.50 3.86
648 649 1.414550 GCATCTGGTAAGACCCTCTCC 59.585 57.143 0.00 0.00 37.50 3.71
649 650 1.067821 CGCATCTGGTAAGACCCTCTC 59.932 57.143 0.00 0.00 37.50 3.20
650 651 1.115467 CGCATCTGGTAAGACCCTCT 58.885 55.000 0.00 0.00 37.50 3.69
651 652 1.112113 TCGCATCTGGTAAGACCCTC 58.888 55.000 0.00 0.00 37.50 4.30
652 653 1.414181 CATCGCATCTGGTAAGACCCT 59.586 52.381 0.00 0.00 37.50 4.34
653 654 1.139058 ACATCGCATCTGGTAAGACCC 59.861 52.381 0.00 0.00 37.50 4.46
654 655 2.159099 TCACATCGCATCTGGTAAGACC 60.159 50.000 0.00 0.00 39.22 3.85
655 656 3.119291 CTCACATCGCATCTGGTAAGAC 58.881 50.000 0.00 0.00 34.48 3.01
656 657 3.023832 TCTCACATCGCATCTGGTAAGA 58.976 45.455 0.00 0.00 36.69 2.10
657 658 3.119291 GTCTCACATCGCATCTGGTAAG 58.881 50.000 0.00 0.00 0.00 2.34
658 659 2.159099 GGTCTCACATCGCATCTGGTAA 60.159 50.000 0.00 0.00 0.00 2.85
659 660 1.409064 GGTCTCACATCGCATCTGGTA 59.591 52.381 0.00 0.00 0.00 3.25
660 661 0.176680 GGTCTCACATCGCATCTGGT 59.823 55.000 0.00 0.00 0.00 4.00
661 662 0.176449 TGGTCTCACATCGCATCTGG 59.824 55.000 0.00 0.00 0.00 3.86
662 663 1.568606 CTGGTCTCACATCGCATCTG 58.431 55.000 0.00 0.00 0.00 2.90
663 664 0.463204 CCTGGTCTCACATCGCATCT 59.537 55.000 0.00 0.00 0.00 2.90
664 665 0.176680 ACCTGGTCTCACATCGCATC 59.823 55.000 0.00 0.00 0.00 3.91
665 666 0.176680 GACCTGGTCTCACATCGCAT 59.823 55.000 19.53 0.00 0.00 4.73
666 667 1.591703 GACCTGGTCTCACATCGCA 59.408 57.895 19.53 0.00 0.00 5.10
667 668 1.517257 CGACCTGGTCTCACATCGC 60.517 63.158 23.49 0.00 0.00 4.58
668 669 1.092348 TACGACCTGGTCTCACATCG 58.908 55.000 23.49 12.17 33.68 3.84
669 670 3.253677 CCTATACGACCTGGTCTCACATC 59.746 52.174 23.49 0.00 0.00 3.06
670 671 3.117625 TCCTATACGACCTGGTCTCACAT 60.118 47.826 23.49 13.12 0.00 3.21
671 672 2.240414 TCCTATACGACCTGGTCTCACA 59.760 50.000 23.49 7.07 0.00 3.58
672 673 2.928334 TCCTATACGACCTGGTCTCAC 58.072 52.381 23.49 0.00 0.00 3.51
673 674 3.878237 ATCCTATACGACCTGGTCTCA 57.122 47.619 23.49 11.87 0.00 3.27
674 675 6.837471 AATAATCCTATACGACCTGGTCTC 57.163 41.667 23.49 0.09 0.00 3.36
675 676 7.256225 GGAAAATAATCCTATACGACCTGGTCT 60.256 40.741 23.49 13.35 36.50 3.85
676 677 6.872547 GGAAAATAATCCTATACGACCTGGTC 59.127 42.308 16.99 16.99 36.50 4.02
677 678 6.239800 GGGAAAATAATCCTATACGACCTGGT 60.240 42.308 0.00 0.00 39.57 4.00
678 679 6.013639 AGGGAAAATAATCCTATACGACCTGG 60.014 42.308 0.00 0.00 39.57 4.45
679 680 7.005709 AGGGAAAATAATCCTATACGACCTG 57.994 40.000 0.00 0.00 39.57 4.00
680 681 6.071503 CGAGGGAAAATAATCCTATACGACCT 60.072 42.308 0.00 0.00 39.57 3.85
681 682 6.098017 CGAGGGAAAATAATCCTATACGACC 58.902 44.000 0.00 0.00 39.57 4.79
682 683 6.098017 CCGAGGGAAAATAATCCTATACGAC 58.902 44.000 0.00 0.00 39.57 4.34
683 684 5.337009 GCCGAGGGAAAATAATCCTATACGA 60.337 44.000 0.00 0.00 39.57 3.43
684 685 4.868734 GCCGAGGGAAAATAATCCTATACG 59.131 45.833 0.00 0.00 39.57 3.06
685 686 5.875359 CAGCCGAGGGAAAATAATCCTATAC 59.125 44.000 0.00 0.00 39.57 1.47
686 687 5.570844 GCAGCCGAGGGAAAATAATCCTATA 60.571 44.000 0.00 0.00 39.57 1.31
687 688 4.807643 GCAGCCGAGGGAAAATAATCCTAT 60.808 45.833 0.00 0.00 39.57 2.57
688 689 3.496160 GCAGCCGAGGGAAAATAATCCTA 60.496 47.826 0.00 0.00 39.57 2.94
689 690 2.749800 GCAGCCGAGGGAAAATAATCCT 60.750 50.000 0.00 0.00 39.57 3.24
690 691 1.609072 GCAGCCGAGGGAAAATAATCC 59.391 52.381 0.00 0.00 38.86 3.01
691 692 1.609072 GGCAGCCGAGGGAAAATAATC 59.391 52.381 0.00 0.00 0.00 1.75
692 693 1.692411 GGCAGCCGAGGGAAAATAAT 58.308 50.000 0.00 0.00 0.00 1.28
693 694 3.184736 GGCAGCCGAGGGAAAATAA 57.815 52.632 0.00 0.00 0.00 1.40
694 695 4.977393 GGCAGCCGAGGGAAAATA 57.023 55.556 0.00 0.00 0.00 1.40
815 823 0.389948 CACAGACGGGTTAGCCTCAC 60.390 60.000 0.00 0.00 34.45 3.51
864 875 1.207329 GAAGTGCGTGTCCCCTTATCT 59.793 52.381 0.00 0.00 0.00 1.98
915 930 1.029408 TGTGGGGAAATCGGAATGCG 61.029 55.000 0.00 0.00 0.00 4.73
916 931 1.134946 CTTGTGGGGAAATCGGAATGC 59.865 52.381 0.00 0.00 0.00 3.56
917 932 2.423538 GTCTTGTGGGGAAATCGGAATG 59.576 50.000 0.00 0.00 0.00 2.67
918 933 2.723273 GTCTTGTGGGGAAATCGGAAT 58.277 47.619 0.00 0.00 0.00 3.01
919 934 1.609580 CGTCTTGTGGGGAAATCGGAA 60.610 52.381 0.00 0.00 0.00 4.30
920 935 0.036765 CGTCTTGTGGGGAAATCGGA 60.037 55.000 0.00 0.00 0.00 4.55
921 936 1.644786 GCGTCTTGTGGGGAAATCGG 61.645 60.000 0.00 0.00 0.00 4.18
972 987 1.181786 CGGAGAGAGTTCTTGGCTCT 58.818 55.000 0.00 0.00 45.08 4.09
1092 1113 3.385749 CTTGGCGGTAGGATGCGGT 62.386 63.158 0.00 0.00 0.00 5.68
1094 1115 0.742990 TTTCTTGGCGGTAGGATGCG 60.743 55.000 0.00 0.00 0.00 4.73
1281 1314 1.517257 CAGCTCCATGTCGTCGTCC 60.517 63.158 0.00 0.00 0.00 4.79
1368 1401 4.131088 GCCGACCGACCTGTCTCC 62.131 72.222 0.00 0.00 32.97 3.71
1389 1422 0.169009 GGCTGGTTTTGCTGATCGAC 59.831 55.000 0.00 0.00 0.00 4.20
1403 1436 1.210478 ACTACTACAAGGCATGGCTGG 59.790 52.381 24.08 22.81 0.00 4.85
1419 1452 4.515944 AGCATCACGGATCAGTACTACTAC 59.484 45.833 0.00 0.00 0.00 2.73
1425 1458 2.030946 GCAAAGCATCACGGATCAGTAC 59.969 50.000 0.00 0.00 0.00 2.73
1428 1461 1.089112 TGCAAAGCATCACGGATCAG 58.911 50.000 0.00 0.00 31.71 2.90
1430 1463 2.095059 AGTTTGCAAAGCATCACGGATC 60.095 45.455 13.26 0.00 38.76 3.36
1434 1467 2.216940 CACAAGTTTGCAAAGCATCACG 59.783 45.455 13.26 0.00 38.76 4.35
1436 1469 2.159071 AGCACAAGTTTGCAAAGCATCA 60.159 40.909 13.26 0.00 45.62 3.07
1437 1470 2.476821 AGCACAAGTTTGCAAAGCATC 58.523 42.857 13.26 0.17 45.62 3.91
1438 1471 2.607631 AGCACAAGTTTGCAAAGCAT 57.392 40.000 13.26 0.00 45.62 3.79
1439 1472 2.799207 GCTAGCACAAGTTTGCAAAGCA 60.799 45.455 13.26 2.80 45.80 3.91
1440 1473 1.788886 GCTAGCACAAGTTTGCAAAGC 59.211 47.619 13.26 12.10 45.62 3.51
1441 1474 3.082698 TGCTAGCACAAGTTTGCAAAG 57.917 42.857 14.93 3.55 45.62 2.77
1442 1475 3.516981 TTGCTAGCACAAGTTTGCAAA 57.483 38.095 19.17 8.05 45.62 3.68
1443 1476 3.731652 ATTGCTAGCACAAGTTTGCAA 57.268 38.095 19.17 0.00 46.29 4.08
1485 1529 0.396435 TTGTACACCAGGTCCTGCAG 59.604 55.000 13.99 6.78 0.00 4.41
1635 1679 5.793817 TGCATGTAAGTATCTGTGTTCTGT 58.206 37.500 0.00 0.00 0.00 3.41
1671 1718 8.665643 AAATCAGATGAAATTGCACTTGAAAA 57.334 26.923 5.94 0.00 0.00 2.29
1672 1719 8.145767 AGAAATCAGATGAAATTGCACTTGAAA 58.854 29.630 5.94 0.00 0.00 2.69
1673 1720 7.663827 AGAAATCAGATGAAATTGCACTTGAA 58.336 30.769 5.94 0.00 0.00 2.69
1674 1721 7.223260 AGAAATCAGATGAAATTGCACTTGA 57.777 32.000 4.59 4.59 0.00 3.02
1675 1722 9.234384 GATAGAAATCAGATGAAATTGCACTTG 57.766 33.333 0.00 0.00 31.93 3.16
1676 1723 8.963725 TGATAGAAATCAGATGAAATTGCACTT 58.036 29.630 0.00 0.00 37.20 3.16
1677 1724 8.404000 GTGATAGAAATCAGATGAAATTGCACT 58.596 33.333 0.00 0.00 42.80 4.40
1678 1725 7.646922 GGTGATAGAAATCAGATGAAATTGCAC 59.353 37.037 0.00 0.00 42.80 4.57
1712 1759 0.109086 GCTCGAGCTGAACTGTAGCA 60.109 55.000 29.88 0.00 43.53 3.49
1715 1762 1.068264 CACTGCTCGAGCTGAACTGTA 60.068 52.381 40.05 18.52 41.71 2.74
1728 1775 0.179140 CGCTCTTCTCCTCACTGCTC 60.179 60.000 0.00 0.00 0.00 4.26
1803 1850 4.937620 TGCTAGAGCGAAAAACTGATGAAT 59.062 37.500 0.00 0.00 45.83 2.57
1827 1874 6.249035 TCACCATTTTCGTAATTCTTCCAC 57.751 37.500 0.00 0.00 0.00 4.02
1839 1886 1.005975 GCGAGACGATCACCATTTTCG 60.006 52.381 0.00 0.00 38.76 3.46
1853 1907 3.814945 CAACAAGAATGGAAAGCGAGAC 58.185 45.455 0.00 0.00 0.00 3.36
1978 2032 4.946157 TCATCTCAGAAAATTCAGAAGCCC 59.054 41.667 0.00 0.00 0.00 5.19
1994 2048 4.392047 ACAGCAACAATTCACTCATCTCA 58.608 39.130 0.00 0.00 0.00 3.27
1999 2053 3.561310 GTCAGACAGCAACAATTCACTCA 59.439 43.478 0.00 0.00 0.00 3.41
2000 2054 3.363378 CGTCAGACAGCAACAATTCACTC 60.363 47.826 0.41 0.00 0.00 3.51
2002 2056 2.543848 TCGTCAGACAGCAACAATTCAC 59.456 45.455 0.41 0.00 0.00 3.18
2007 2061 2.100087 TGTACTCGTCAGACAGCAACAA 59.900 45.455 0.41 0.00 0.00 2.83
2008 2062 1.679153 TGTACTCGTCAGACAGCAACA 59.321 47.619 0.41 3.73 0.00 3.33
2009 2063 2.417339 TGTACTCGTCAGACAGCAAC 57.583 50.000 0.41 1.46 0.00 4.17
2090 2148 7.981789 ACGATAGAATCAACACATGTATCAGTT 59.018 33.333 0.00 0.00 41.38 3.16
2125 2183 3.207778 ACAGATTGTTTTCCCGTCGAAA 58.792 40.909 0.00 0.00 38.74 3.46
2134 2192 9.387123 GAATTGTGACTCTAACAGATTGTTTTC 57.613 33.333 0.00 0.00 41.45 2.29
2136 2194 7.040409 GGGAATTGTGACTCTAACAGATTGTTT 60.040 37.037 0.00 0.00 41.45 2.83
2151 2209 5.774498 AGAAAAACAGAGGGAATTGTGAC 57.226 39.130 0.00 0.00 0.00 3.67
2200 2258 9.160496 ACTGCAAATAATTTCTTGACACAAAAA 57.840 25.926 3.96 0.00 0.00 1.94
2201 2259 8.602328 CACTGCAAATAATTTCTTGACACAAAA 58.398 29.630 3.96 0.00 0.00 2.44
2204 2262 6.804677 ACACTGCAAATAATTTCTTGACACA 58.195 32.000 3.96 0.00 0.00 3.72
2218 2276 6.769822 CCTCAAGATCCTAATACACTGCAAAT 59.230 38.462 0.00 0.00 0.00 2.32
2237 2295 8.293157 GGATGAACTTACTTTTTCTTCCTCAAG 58.707 37.037 8.34 0.00 40.48 3.02
2240 2298 6.427242 ACGGATGAACTTACTTTTTCTTCCTC 59.573 38.462 12.05 0.00 41.04 3.71
2243 2301 6.956047 ACACGGATGAACTTACTTTTTCTTC 58.044 36.000 0.00 0.00 0.00 2.87
2246 2304 6.074142 ACGTACACGGATGAACTTACTTTTTC 60.074 38.462 6.72 0.00 44.95 2.29
2249 2307 4.874970 ACGTACACGGATGAACTTACTTT 58.125 39.130 6.72 0.00 44.95 2.66
2252 2310 4.088823 AGACGTACACGGATGAACTTAC 57.911 45.455 6.72 0.00 44.95 2.34
2253 2311 4.937620 ACTAGACGTACACGGATGAACTTA 59.062 41.667 6.72 0.00 44.95 2.24
2255 2313 3.126514 CACTAGACGTACACGGATGAACT 59.873 47.826 6.72 0.00 44.95 3.01
2256 2314 3.423571 CACTAGACGTACACGGATGAAC 58.576 50.000 6.72 0.00 44.95 3.18
2260 2318 1.747709 AGCACTAGACGTACACGGAT 58.252 50.000 6.72 0.00 44.95 4.18
2261 2319 1.198408 CAAGCACTAGACGTACACGGA 59.802 52.381 6.72 0.00 44.95 4.69
2263 2321 2.327081 ACAAGCACTAGACGTACACG 57.673 50.000 0.00 0.00 46.33 4.49
2264 2322 3.362693 GCAAACAAGCACTAGACGTACAC 60.363 47.826 0.00 0.00 0.00 2.90
2265 2323 2.798283 GCAAACAAGCACTAGACGTACA 59.202 45.455 0.00 0.00 0.00 2.90
2266 2324 2.798283 TGCAAACAAGCACTAGACGTAC 59.202 45.455 0.00 0.00 40.11 3.67
2267 2325 3.100658 TGCAAACAAGCACTAGACGTA 57.899 42.857 0.00 0.00 40.11 3.57
2268 2326 1.948104 TGCAAACAAGCACTAGACGT 58.052 45.000 0.00 0.00 40.11 4.34
2279 2337 4.366586 TCGCATGAATTTCTTGCAAACAA 58.633 34.783 27.03 11.22 44.74 2.83
2289 2347 3.605486 GTGCAAGAACTCGCATGAATTTC 59.395 43.478 0.00 0.00 40.89 2.17
2291 2349 2.816087 AGTGCAAGAACTCGCATGAATT 59.184 40.909 0.00 0.00 40.89 2.17
2301 2359 6.000219 ACATTGTAATCTGAGTGCAAGAACT 59.000 36.000 13.50 0.00 0.00 3.01
2305 2363 6.643845 CGATACATTGTAATCTGAGTGCAAG 58.356 40.000 13.50 8.62 0.00 4.01
2307 2365 4.507756 GCGATACATTGTAATCTGAGTGCA 59.492 41.667 0.00 0.00 0.00 4.57
2312 2370 4.927422 TCACGCGATACATTGTAATCTGA 58.073 39.130 15.93 0.00 0.00 3.27
2313 2371 5.635549 TTCACGCGATACATTGTAATCTG 57.364 39.130 15.93 0.00 0.00 2.90
2319 2377 2.418692 TGGTTTCACGCGATACATTGT 58.581 42.857 15.93 0.00 0.00 2.71
2321 2379 3.438781 ACATTGGTTTCACGCGATACATT 59.561 39.130 15.93 0.00 0.00 2.71
2326 2384 3.006940 ACATACATTGGTTTCACGCGAT 58.993 40.909 15.93 0.00 0.00 4.58
2327 2385 2.418692 ACATACATTGGTTTCACGCGA 58.581 42.857 15.93 0.00 0.00 5.87
2331 2389 6.150976 TCAGGATGAACATACATTGGTTTCAC 59.849 38.462 0.00 0.00 45.97 3.18
2352 2414 3.234353 TGGCCATAGTCAGATACTCAGG 58.766 50.000 0.00 0.00 39.80 3.86
2355 2417 4.281941 TGTGATGGCCATAGTCAGATACTC 59.718 45.833 20.84 2.49 39.80 2.59
2359 2421 4.508551 TTTGTGATGGCCATAGTCAGAT 57.491 40.909 20.84 0.00 0.00 2.90
2360 2422 3.998913 TTTGTGATGGCCATAGTCAGA 57.001 42.857 20.84 9.65 0.00 3.27
2366 2428 6.889177 TGAGAGTTTAATTTGTGATGGCCATA 59.111 34.615 20.84 2.08 0.00 2.74
2369 2431 5.183904 AGTGAGAGTTTAATTTGTGATGGCC 59.816 40.000 0.00 0.00 0.00 5.36
2441 2515 9.520204 CTGTGATATTAAATTTGCTGGGTTAAG 57.480 33.333 0.00 0.00 0.00 1.85
2583 2657 7.718525 TGTCTTGTAATGTAGAGTGTGTGTTA 58.281 34.615 0.00 0.00 0.00 2.41
2585 2659 6.156748 TGTCTTGTAATGTAGAGTGTGTGT 57.843 37.500 0.00 0.00 0.00 3.72
2587 2661 6.093404 CGATGTCTTGTAATGTAGAGTGTGT 58.907 40.000 0.00 0.00 0.00 3.72
2590 2664 5.043903 CCCGATGTCTTGTAATGTAGAGTG 58.956 45.833 0.00 0.00 0.00 3.51
2613 2687 2.278332 AGCCTTTTCCCTTGTCAGTC 57.722 50.000 0.00 0.00 0.00 3.51
2643 2717 5.587844 ACATATTCATGGAGAACTTGAGCAC 59.412 40.000 0.00 0.00 39.49 4.40
2674 2748 4.880537 CTGAGCAGCTACCCGCCG 62.881 72.222 0.00 0.00 40.39 6.46
2698 2772 6.537566 GTTTACTAATGTCTCATGCTGTGTG 58.462 40.000 0.00 0.00 0.00 3.82
2720 2794 5.228665 GGCTTCTTGTAGTTACTTCTCGTT 58.771 41.667 0.00 0.00 0.00 3.85
2913 2990 0.108662 GCATTAGTTTGGTGCCTGCC 60.109 55.000 0.00 0.00 32.88 4.85
2933 3014 3.515901 GCAGGAGAAGAAAAGGTCCTCTA 59.484 47.826 0.00 0.00 37.32 2.43


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.