Multiple sequence alignment - TraesCS7B01G312400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G312400 chr7B 100.000 3162 0 0 1 3162 558317231 558320392 0.000000e+00 5840.0
1 TraesCS7B01G312400 chr7B 87.563 1399 137 20 798 2175 558211037 558212419 0.000000e+00 1585.0
2 TraesCS7B01G312400 chr7B 100.000 133 0 0 3384 3516 558320614 558320746 2.710000e-61 246.0
3 TraesCS7B01G312400 chr7D 93.114 1583 75 15 709 2271 523265313 523266881 0.000000e+00 2289.0
4 TraesCS7B01G312400 chr7D 87.355 1384 135 23 831 2190 523195344 523196711 0.000000e+00 1550.0
5 TraesCS7B01G312400 chr7D 93.235 473 20 4 2279 2746 523266926 523267391 0.000000e+00 686.0
6 TraesCS7B01G312400 chr7D 86.817 311 20 10 420 719 523203723 523204023 9.410000e-86 327.0
7 TraesCS7B01G312400 chr7D 91.220 205 10 4 2818 3014 523267592 523267796 4.470000e-69 272.0
8 TraesCS7B01G312400 chr7D 82.534 292 41 8 2384 2673 523196739 523197022 7.540000e-62 248.0
9 TraesCS7B01G312400 chr7D 88.971 136 5 4 3013 3148 523267858 523267983 3.630000e-35 159.0
10 TraesCS7B01G312400 chr7A 86.086 1423 139 25 798 2190 603903324 603904717 0.000000e+00 1476.0
11 TraesCS7B01G312400 chr7A 95.580 362 15 1 900 1260 603942644 603943005 2.350000e-161 579.0
12 TraesCS7B01G312400 chr7A 79.167 504 64 25 420 902 603932291 603932774 9.480000e-81 311.0
13 TraesCS7B01G312400 chr7A 81.507 292 44 9 2384 2673 603904745 603905028 7.590000e-57 231.0
14 TraesCS7B01G312400 chr5B 78.057 1194 209 30 1008 2174 63844304 63845471 0.000000e+00 704.0
15 TraesCS7B01G312400 chr5B 77.713 1198 209 34 1008 2174 72252938 72254108 0.000000e+00 680.0
16 TraesCS7B01G312400 chr5B 77.592 1196 213 40 1008 2174 63631981 63633150 0.000000e+00 673.0
17 TraesCS7B01G312400 chr5B 91.791 134 10 1 3384 3516 591610466 591610333 5.990000e-43 185.0
18 TraesCS7B01G312400 chr5B 86.567 134 17 1 3384 3516 265428405 265428272 2.830000e-31 147.0
19 TraesCS7B01G312400 chr5D 80.579 932 157 15 1008 1936 58677731 58678641 0.000000e+00 697.0
20 TraesCS7B01G312400 chr5D 79.912 906 158 17 1008 1904 58947003 58947893 0.000000e+00 643.0
21 TraesCS7B01G312400 chr5D 80.952 189 35 1 1003 1190 58946023 58946211 7.860000e-32 148.0
22 TraesCS7B01G312400 chr2D 78.672 708 137 7 1101 1795 8976733 8977439 3.200000e-125 459.0
23 TraesCS7B01G312400 chr3B 91.736 121 9 1 3384 3503 713995389 713995509 2.170000e-37 167.0
24 TraesCS7B01G312400 chr3B 84.138 145 10 6 3384 3516 109863086 109863229 1.020000e-25 128.0
25 TraesCS7B01G312400 chr4B 86.014 143 10 3 3384 3516 484807995 484807853 1.020000e-30 145.0
26 TraesCS7B01G312400 chr1B 81.250 144 14 7 3385 3516 482709177 482709319 1.730000e-18 104.0
27 TraesCS7B01G312400 chr1B 95.238 42 1 1 3475 3516 482709332 482709372 8.150000e-07 65.8
28 TraesCS7B01G312400 chr2B 97.436 39 1 0 3466 3504 601933297 601933335 2.270000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G312400 chr7B 558317231 558320746 3515 False 3043.0 5840 100.0000 1 3516 2 chr7B.!!$F2 3515
1 TraesCS7B01G312400 chr7B 558211037 558212419 1382 False 1585.0 1585 87.5630 798 2175 1 chr7B.!!$F1 1377
2 TraesCS7B01G312400 chr7D 523195344 523197022 1678 False 899.0 1550 84.9445 831 2673 2 chr7D.!!$F2 1842
3 TraesCS7B01G312400 chr7D 523265313 523267983 2670 False 851.5 2289 91.6350 709 3148 4 chr7D.!!$F3 2439
4 TraesCS7B01G312400 chr7A 603903324 603905028 1704 False 853.5 1476 83.7965 798 2673 2 chr7A.!!$F3 1875
5 TraesCS7B01G312400 chr5B 63844304 63845471 1167 False 704.0 704 78.0570 1008 2174 1 chr5B.!!$F2 1166
6 TraesCS7B01G312400 chr5B 72252938 72254108 1170 False 680.0 680 77.7130 1008 2174 1 chr5B.!!$F3 1166
7 TraesCS7B01G312400 chr5B 63631981 63633150 1169 False 673.0 673 77.5920 1008 2174 1 chr5B.!!$F1 1166
8 TraesCS7B01G312400 chr5D 58677731 58678641 910 False 697.0 697 80.5790 1008 1936 1 chr5D.!!$F1 928
9 TraesCS7B01G312400 chr5D 58946023 58947893 1870 False 395.5 643 80.4320 1003 1904 2 chr5D.!!$F2 901
10 TraesCS7B01G312400 chr2D 8976733 8977439 706 False 459.0 459 78.6720 1101 1795 1 chr2D.!!$F1 694

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
407 408 0.094730 GATAAGACGCGCGCACTTTT 59.905 50.0 34.38 29.0 0.0 2.27 F
412 413 0.094730 GACGCGCGCACTTTTTAGAT 59.905 50.0 32.58 5.0 0.0 1.98 F
474 475 0.255890 TAGGCTTTGGGGTGAGATGC 59.744 55.0 0.00 0.0 0.0 3.91 F
1873 2895 0.321346 CAATGCCCCCAACCTGAAAC 59.679 55.0 0.00 0.0 0.0 2.78 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1873 2895 1.067582 GCTCCAGGTACCCGAATCG 59.932 63.158 8.74 0.00 0.0 3.34 R
1874 2896 1.335132 TGGCTCCAGGTACCCGAATC 61.335 60.000 8.74 0.70 0.0 2.52 R
2075 3136 1.411394 CAAAACGCACATTCAGGCTG 58.589 50.000 8.58 8.58 0.0 4.85 R
2763 3988 0.398522 ACACTGACCACTCCACTCCA 60.399 55.000 0.00 0.00 0.0 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.375014 TAGATCACGGGATGGCTACA 57.625 50.000 3.97 0.00 32.67 2.74
20 21 0.753262 AGATCACGGGATGGCTACAC 59.247 55.000 3.97 0.00 32.67 2.90
21 22 0.464036 GATCACGGGATGGCTACACA 59.536 55.000 3.97 0.00 32.67 3.72
22 23 0.465705 ATCACGGGATGGCTACACAG 59.534 55.000 0.00 0.00 30.86 3.66
23 24 0.613572 TCACGGGATGGCTACACAGA 60.614 55.000 0.00 0.00 0.00 3.41
24 25 0.179100 CACGGGATGGCTACACAGAG 60.179 60.000 0.00 0.00 0.00 3.35
25 26 0.614979 ACGGGATGGCTACACAGAGT 60.615 55.000 0.00 0.00 0.00 3.24
26 27 0.103208 CGGGATGGCTACACAGAGTC 59.897 60.000 0.00 0.00 0.00 3.36
27 28 0.103208 GGGATGGCTACACAGAGTCG 59.897 60.000 0.00 0.00 0.00 4.18
28 29 1.103803 GGATGGCTACACAGAGTCGA 58.896 55.000 0.00 0.00 0.00 4.20
29 30 1.683917 GGATGGCTACACAGAGTCGAT 59.316 52.381 0.00 0.00 0.00 3.59
30 31 2.544694 GGATGGCTACACAGAGTCGATG 60.545 54.545 0.00 0.00 0.00 3.84
31 32 0.817654 TGGCTACACAGAGTCGATGG 59.182 55.000 0.00 0.00 0.00 3.51
32 33 0.528684 GGCTACACAGAGTCGATGGC 60.529 60.000 0.00 0.00 0.00 4.40
33 34 0.528684 GCTACACAGAGTCGATGGCC 60.529 60.000 0.00 0.00 0.00 5.36
34 35 0.248661 CTACACAGAGTCGATGGCCG 60.249 60.000 0.00 0.00 40.25 6.13
35 36 1.663379 TACACAGAGTCGATGGCCGG 61.663 60.000 0.00 0.00 39.14 6.13
36 37 3.461773 ACAGAGTCGATGGCCGGG 61.462 66.667 2.18 0.00 39.14 5.73
37 38 4.899239 CAGAGTCGATGGCCGGGC 62.899 72.222 23.42 23.42 39.14 6.13
39 40 4.899239 GAGTCGATGGCCGGGCAG 62.899 72.222 35.19 22.92 39.14 4.85
41 42 4.899239 GTCGATGGCCGGGCAGAG 62.899 72.222 35.19 28.82 39.14 3.35
51 52 4.537433 GGGCAGAGCGCTGGGTAG 62.537 72.222 18.48 0.00 42.53 3.18
62 63 3.254629 CTGGGTAGCAGCAATGTGT 57.745 52.632 0.00 0.00 0.00 3.72
63 64 0.806868 CTGGGTAGCAGCAATGTGTG 59.193 55.000 0.00 0.00 0.00 3.82
74 75 1.229428 CAATGTGTGCTCCTTCACGT 58.771 50.000 0.00 0.00 39.73 4.49
75 76 1.069703 CAATGTGTGCTCCTTCACGTG 60.070 52.381 9.94 9.94 39.73 4.49
76 77 0.603707 ATGTGTGCTCCTTCACGTGG 60.604 55.000 17.00 0.00 39.73 4.94
77 78 2.280797 TGTGCTCCTTCACGTGGC 60.281 61.111 17.00 11.27 39.73 5.01
78 79 2.280797 GTGCTCCTTCACGTGGCA 60.281 61.111 17.00 13.97 0.00 4.92
79 80 1.672356 GTGCTCCTTCACGTGGCAT 60.672 57.895 17.00 0.00 35.37 4.40
80 81 1.375908 TGCTCCTTCACGTGGCATC 60.376 57.895 17.00 1.33 0.00 3.91
81 82 2.109126 GCTCCTTCACGTGGCATCC 61.109 63.158 17.00 0.00 0.00 3.51
82 83 1.450312 CTCCTTCACGTGGCATCCC 60.450 63.158 17.00 0.00 0.00 3.85
83 84 2.438434 CCTTCACGTGGCATCCCC 60.438 66.667 17.00 0.00 0.00 4.81
84 85 2.819595 CTTCACGTGGCATCCCCG 60.820 66.667 17.00 0.00 35.87 5.73
92 93 4.171103 GGCATCCCCGCCGTAGTT 62.171 66.667 0.00 0.00 43.52 2.24
93 94 2.588034 GCATCCCCGCCGTAGTTC 60.588 66.667 0.00 0.00 0.00 3.01
94 95 2.279252 CATCCCCGCCGTAGTTCG 60.279 66.667 0.00 0.00 39.52 3.95
95 96 4.217159 ATCCCCGCCGTAGTTCGC 62.217 66.667 0.00 0.00 38.35 4.70
97 98 4.867599 CCCCGCCGTAGTTCGCTC 62.868 72.222 0.00 0.00 38.35 5.03
99 100 4.471726 CCGCCGTAGTTCGCTCGT 62.472 66.667 0.00 0.00 38.35 4.18
100 101 2.943034 CGCCGTAGTTCGCTCGTC 60.943 66.667 0.00 0.00 38.35 4.20
101 102 2.578981 GCCGTAGTTCGCTCGTCC 60.579 66.667 0.00 0.00 38.35 4.79
102 103 2.277120 CCGTAGTTCGCTCGTCCG 60.277 66.667 0.00 0.00 38.35 4.79
103 104 2.277120 CGTAGTTCGCTCGTCCGG 60.277 66.667 0.00 0.00 0.00 5.14
104 105 2.101770 GTAGTTCGCTCGTCCGGG 59.898 66.667 0.00 0.00 0.00 5.73
105 106 3.136123 TAGTTCGCTCGTCCGGGG 61.136 66.667 0.00 0.00 0.00 5.73
125 126 2.959275 CGCAACCGGAGTAGATCAC 58.041 57.895 9.46 0.00 0.00 3.06
126 127 0.866061 CGCAACCGGAGTAGATCACG 60.866 60.000 9.46 0.00 0.00 4.35
127 128 1.146358 GCAACCGGAGTAGATCACGC 61.146 60.000 9.46 0.00 0.00 5.34
128 129 0.172578 CAACCGGAGTAGATCACGCA 59.827 55.000 9.46 0.00 0.00 5.24
129 130 1.112113 AACCGGAGTAGATCACGCAT 58.888 50.000 9.46 0.00 0.00 4.73
130 131 0.669077 ACCGGAGTAGATCACGCATC 59.331 55.000 9.46 0.00 0.00 3.91
131 132 0.668535 CCGGAGTAGATCACGCATCA 59.331 55.000 0.00 0.00 33.29 3.07
132 133 1.600663 CCGGAGTAGATCACGCATCAC 60.601 57.143 0.00 0.00 33.29 3.06
164 165 4.039042 CCCTTTTGGCTGGGATGG 57.961 61.111 0.00 0.00 46.15 3.51
165 166 2.361567 CCCTTTTGGCTGGGATGGC 61.362 63.158 0.00 0.00 46.15 4.40
166 167 2.713967 CCTTTTGGCTGGGATGGCG 61.714 63.158 0.00 0.00 35.06 5.69
167 168 2.679642 TTTTGGCTGGGATGGCGG 60.680 61.111 0.00 0.00 35.06 6.13
182 183 3.764466 CGGCTCGCAGAAGGAGGT 61.764 66.667 0.00 0.00 34.09 3.85
183 184 2.125350 GGCTCGCAGAAGGAGGTG 60.125 66.667 0.00 0.00 34.09 4.00
184 185 2.650116 GGCTCGCAGAAGGAGGTGA 61.650 63.158 0.00 0.00 34.09 4.02
185 186 1.153667 GCTCGCAGAAGGAGGTGAG 60.154 63.158 0.00 0.00 42.91 3.51
186 187 1.153667 CTCGCAGAAGGAGGTGAGC 60.154 63.158 0.00 0.00 35.18 4.26
187 188 2.507992 CGCAGAAGGAGGTGAGCG 60.508 66.667 0.00 0.00 39.17 5.03
188 189 2.125350 GCAGAAGGAGGTGAGCGG 60.125 66.667 0.00 0.00 0.00 5.52
189 190 2.125350 CAGAAGGAGGTGAGCGGC 60.125 66.667 0.00 0.00 0.00 6.53
190 191 3.764466 AGAAGGAGGTGAGCGGCG 61.764 66.667 0.51 0.51 0.00 6.46
191 192 4.821589 GAAGGAGGTGAGCGGCGG 62.822 72.222 9.78 0.00 0.00 6.13
225 226 2.049063 GCTATGGGCGCGAGGTAG 60.049 66.667 12.10 7.09 0.00 3.18
226 227 2.651361 CTATGGGCGCGAGGTAGG 59.349 66.667 12.10 0.00 0.00 3.18
227 228 3.575351 CTATGGGCGCGAGGTAGGC 62.575 68.421 12.10 0.00 0.00 3.93
260 261 3.857764 CGTAGCCGGGAGAAGGAT 58.142 61.111 2.18 0.00 0.00 3.24
261 262 1.660917 CGTAGCCGGGAGAAGGATC 59.339 63.158 2.18 0.00 0.00 3.36
262 263 1.660917 GTAGCCGGGAGAAGGATCG 59.339 63.158 2.18 0.00 0.00 3.69
263 264 1.530891 TAGCCGGGAGAAGGATCGG 60.531 63.158 2.18 0.00 44.70 4.18
264 265 2.996470 TAGCCGGGAGAAGGATCGGG 62.996 65.000 2.18 0.00 42.43 5.14
265 266 3.234730 CCGGGAGAAGGATCGGGG 61.235 72.222 0.00 0.00 38.93 5.73
266 267 2.444140 CGGGAGAAGGATCGGGGT 60.444 66.667 0.00 0.00 0.00 4.95
267 268 2.797278 CGGGAGAAGGATCGGGGTG 61.797 68.421 0.00 0.00 0.00 4.61
268 269 2.444256 GGGAGAAGGATCGGGGTGG 61.444 68.421 0.00 0.00 0.00 4.61
269 270 2.506472 GAGAAGGATCGGGGTGGC 59.494 66.667 0.00 0.00 0.00 5.01
270 271 2.285368 AGAAGGATCGGGGTGGCA 60.285 61.111 0.00 0.00 0.00 4.92
271 272 1.694169 AGAAGGATCGGGGTGGCAT 60.694 57.895 0.00 0.00 0.00 4.40
272 273 1.227973 GAAGGATCGGGGTGGCATC 60.228 63.158 0.00 0.00 0.00 3.91
273 274 2.682582 GAAGGATCGGGGTGGCATCC 62.683 65.000 8.74 8.74 37.01 3.51
274 275 3.488569 GGATCGGGGTGGCATCCA 61.489 66.667 20.42 0.00 36.78 3.41
284 285 2.903855 GGCATCCACATCGCCAGG 60.904 66.667 0.00 0.00 45.52 4.45
285 286 2.190313 GCATCCACATCGCCAGGA 59.810 61.111 0.00 0.00 35.59 3.86
286 287 1.890979 GCATCCACATCGCCAGGAG 60.891 63.158 0.00 0.00 34.40 3.69
287 288 1.524002 CATCCACATCGCCAGGAGT 59.476 57.895 0.00 0.00 34.40 3.85
288 289 0.752658 CATCCACATCGCCAGGAGTA 59.247 55.000 0.00 0.00 34.40 2.59
289 290 1.043816 ATCCACATCGCCAGGAGTAG 58.956 55.000 0.00 0.00 34.40 2.57
290 291 1.043116 TCCACATCGCCAGGAGTAGG 61.043 60.000 0.00 0.00 0.00 3.18
291 292 1.043116 CCACATCGCCAGGAGTAGGA 61.043 60.000 0.00 0.00 0.00 2.94
292 293 0.387202 CACATCGCCAGGAGTAGGAG 59.613 60.000 0.00 0.00 0.00 3.69
293 294 1.365633 CATCGCCAGGAGTAGGAGC 59.634 63.158 0.00 0.00 0.00 4.70
295 296 4.577246 CGCCAGGAGTAGGAGCGC 62.577 72.222 0.00 0.00 40.35 5.92
296 297 4.577246 GCCAGGAGTAGGAGCGCG 62.577 72.222 0.00 0.00 0.00 6.86
297 298 3.905678 CCAGGAGTAGGAGCGCGG 61.906 72.222 8.83 0.00 0.00 6.46
298 299 4.577246 CAGGAGTAGGAGCGCGGC 62.577 72.222 8.83 0.00 0.00 6.53
301 302 4.189188 GAGTAGGAGCGCGGCGAA 62.189 66.667 28.54 1.94 0.00 4.70
302 303 4.194720 AGTAGGAGCGCGGCGAAG 62.195 66.667 28.54 4.43 0.00 3.79
323 324 3.706373 GCGTGGCCAGGAGAAGGA 61.706 66.667 29.10 0.00 0.00 3.36
324 325 2.581354 CGTGGCCAGGAGAAGGAG 59.419 66.667 20.97 0.00 0.00 3.69
325 326 2.270527 GTGGCCAGGAGAAGGAGC 59.729 66.667 5.11 0.00 0.00 4.70
326 327 3.393970 TGGCCAGGAGAAGGAGCG 61.394 66.667 0.00 0.00 0.00 5.03
327 328 4.168291 GGCCAGGAGAAGGAGCGG 62.168 72.222 0.00 0.00 0.00 5.52
328 329 4.168291 GCCAGGAGAAGGAGCGGG 62.168 72.222 0.00 0.00 0.00 6.13
329 330 3.474570 CCAGGAGAAGGAGCGGGG 61.475 72.222 0.00 0.00 0.00 5.73
330 331 4.168291 CAGGAGAAGGAGCGGGGC 62.168 72.222 0.00 0.00 0.00 5.80
331 332 4.722535 AGGAGAAGGAGCGGGGCA 62.723 66.667 0.00 0.00 0.00 5.36
332 333 4.168291 GGAGAAGGAGCGGGGCAG 62.168 72.222 0.00 0.00 0.00 4.85
333 334 4.847444 GAGAAGGAGCGGGGCAGC 62.847 72.222 0.00 0.00 37.41 5.25
363 364 3.465403 CGGGAGGACTGCTGGAGG 61.465 72.222 0.14 0.00 0.00 4.30
364 365 3.791586 GGGAGGACTGCTGGAGGC 61.792 72.222 0.14 0.00 42.22 4.70
373 374 2.586792 GCTGGAGGCAGGTAGTGG 59.413 66.667 0.00 0.00 41.35 4.00
374 375 3.036429 GCTGGAGGCAGGTAGTGGG 62.036 68.421 0.00 0.00 41.35 4.61
375 376 1.306141 CTGGAGGCAGGTAGTGGGA 60.306 63.158 0.00 0.00 0.00 4.37
376 377 1.306141 TGGAGGCAGGTAGTGGGAG 60.306 63.158 0.00 0.00 0.00 4.30
377 378 1.001760 GGAGGCAGGTAGTGGGAGA 59.998 63.158 0.00 0.00 0.00 3.71
378 379 0.399233 GGAGGCAGGTAGTGGGAGAT 60.399 60.000 0.00 0.00 0.00 2.75
379 380 0.755686 GAGGCAGGTAGTGGGAGATG 59.244 60.000 0.00 0.00 0.00 2.90
380 381 0.692419 AGGCAGGTAGTGGGAGATGG 60.692 60.000 0.00 0.00 0.00 3.51
381 382 1.700042 GGCAGGTAGTGGGAGATGGG 61.700 65.000 0.00 0.00 0.00 4.00
382 383 1.832912 CAGGTAGTGGGAGATGGGC 59.167 63.158 0.00 0.00 0.00 5.36
383 384 1.762460 AGGTAGTGGGAGATGGGCG 60.762 63.158 0.00 0.00 0.00 6.13
384 385 1.760875 GGTAGTGGGAGATGGGCGA 60.761 63.158 0.00 0.00 0.00 5.54
385 386 1.335132 GGTAGTGGGAGATGGGCGAA 61.335 60.000 0.00 0.00 0.00 4.70
386 387 0.759346 GTAGTGGGAGATGGGCGAAT 59.241 55.000 0.00 0.00 0.00 3.34
387 388 0.758734 TAGTGGGAGATGGGCGAATG 59.241 55.000 0.00 0.00 0.00 2.67
388 389 1.526917 GTGGGAGATGGGCGAATGG 60.527 63.158 0.00 0.00 0.00 3.16
389 390 1.692395 TGGGAGATGGGCGAATGGA 60.692 57.895 0.00 0.00 0.00 3.41
390 391 1.061905 TGGGAGATGGGCGAATGGAT 61.062 55.000 0.00 0.00 0.00 3.41
391 392 0.984230 GGGAGATGGGCGAATGGATA 59.016 55.000 0.00 0.00 0.00 2.59
392 393 1.351017 GGGAGATGGGCGAATGGATAA 59.649 52.381 0.00 0.00 0.00 1.75
393 394 2.616510 GGGAGATGGGCGAATGGATAAG 60.617 54.545 0.00 0.00 0.00 1.73
394 395 2.303022 GGAGATGGGCGAATGGATAAGA 59.697 50.000 0.00 0.00 0.00 2.10
395 396 3.330267 GAGATGGGCGAATGGATAAGAC 58.670 50.000 0.00 0.00 0.00 3.01
396 397 2.069273 GATGGGCGAATGGATAAGACG 58.931 52.381 0.00 0.00 0.00 4.18
397 398 0.531974 TGGGCGAATGGATAAGACGC 60.532 55.000 0.00 0.00 46.79 5.19
399 400 1.201825 GCGAATGGATAAGACGCGC 59.798 57.895 5.73 0.00 39.90 6.86
400 401 1.482955 CGAATGGATAAGACGCGCG 59.517 57.895 30.96 30.96 0.00 6.86
401 402 1.201825 GAATGGATAAGACGCGCGC 59.798 57.895 32.58 23.91 0.00 6.86
402 403 1.487452 GAATGGATAAGACGCGCGCA 61.487 55.000 32.58 18.43 0.00 6.09
403 404 1.762222 AATGGATAAGACGCGCGCAC 61.762 55.000 32.58 23.99 0.00 5.34
404 405 2.582498 GGATAAGACGCGCGCACT 60.582 61.111 32.58 25.93 0.00 4.40
405 406 2.165301 GGATAAGACGCGCGCACTT 61.165 57.895 32.78 32.78 0.00 3.16
406 407 1.693083 GGATAAGACGCGCGCACTTT 61.693 55.000 34.38 25.10 0.00 2.66
407 408 0.094730 GATAAGACGCGCGCACTTTT 59.905 50.000 34.38 29.00 0.00 2.27
408 409 0.515564 ATAAGACGCGCGCACTTTTT 59.484 45.000 34.38 23.98 0.00 1.94
409 410 1.138337 TAAGACGCGCGCACTTTTTA 58.862 45.000 34.38 21.21 0.00 1.52
410 411 0.110823 AAGACGCGCGCACTTTTTAG 60.111 50.000 32.58 14.51 0.00 1.85
411 412 0.942410 AGACGCGCGCACTTTTTAGA 60.942 50.000 32.58 0.00 0.00 2.10
412 413 0.094730 GACGCGCGCACTTTTTAGAT 59.905 50.000 32.58 5.00 0.00 1.98
413 414 0.515564 ACGCGCGCACTTTTTAGATT 59.484 45.000 32.58 1.37 0.00 2.40
414 415 1.069500 ACGCGCGCACTTTTTAGATTT 60.069 42.857 32.58 0.82 0.00 2.17
415 416 1.976045 CGCGCGCACTTTTTAGATTTT 59.024 42.857 32.61 0.00 0.00 1.82
416 417 3.157510 CGCGCGCACTTTTTAGATTTTA 58.842 40.909 32.61 0.00 0.00 1.52
417 418 3.235179 CGCGCGCACTTTTTAGATTTTAG 59.765 43.478 32.61 3.88 0.00 1.85
418 419 3.542310 GCGCGCACTTTTTAGATTTTAGG 59.458 43.478 29.10 0.00 0.00 2.69
419 420 4.670735 GCGCGCACTTTTTAGATTTTAGGA 60.671 41.667 29.10 0.00 0.00 2.94
420 421 5.569413 CGCGCACTTTTTAGATTTTAGGAT 58.431 37.500 8.75 0.00 0.00 3.24
421 422 6.711579 CGCGCACTTTTTAGATTTTAGGATA 58.288 36.000 8.75 0.00 0.00 2.59
422 423 7.184106 CGCGCACTTTTTAGATTTTAGGATAA 58.816 34.615 8.75 0.00 0.00 1.75
423 424 7.694784 CGCGCACTTTTTAGATTTTAGGATAAA 59.305 33.333 8.75 0.00 0.00 1.40
424 425 9.516314 GCGCACTTTTTAGATTTTAGGATAAAT 57.484 29.630 0.30 0.00 0.00 1.40
460 461 8.579850 TGTAAACTTTCATGATGAAATAGGCT 57.420 30.769 19.72 7.08 44.37 4.58
461 462 9.023962 TGTAAACTTTCATGATGAAATAGGCTT 57.976 29.630 19.72 9.50 44.37 4.35
462 463 9.860898 GTAAACTTTCATGATGAAATAGGCTTT 57.139 29.630 19.72 13.70 44.37 3.51
463 464 8.767478 AAACTTTCATGATGAAATAGGCTTTG 57.233 30.769 19.72 9.03 44.37 2.77
464 465 6.870769 ACTTTCATGATGAAATAGGCTTTGG 58.129 36.000 19.72 8.39 44.37 3.28
465 466 5.857471 TTCATGATGAAATAGGCTTTGGG 57.143 39.130 5.21 0.00 32.71 4.12
466 467 4.217510 TCATGATGAAATAGGCTTTGGGG 58.782 43.478 0.00 0.00 0.00 4.96
467 468 3.756082 TGATGAAATAGGCTTTGGGGT 57.244 42.857 0.00 0.00 0.00 4.95
468 469 3.364549 TGATGAAATAGGCTTTGGGGTG 58.635 45.455 0.00 0.00 0.00 4.61
469 470 3.011144 TGATGAAATAGGCTTTGGGGTGA 59.989 43.478 0.00 0.00 0.00 4.02
470 471 3.085952 TGAAATAGGCTTTGGGGTGAG 57.914 47.619 0.00 0.00 0.00 3.51
471 472 2.647299 TGAAATAGGCTTTGGGGTGAGA 59.353 45.455 0.00 0.00 0.00 3.27
472 473 3.269381 TGAAATAGGCTTTGGGGTGAGAT 59.731 43.478 0.00 0.00 0.00 2.75
473 474 3.303351 AATAGGCTTTGGGGTGAGATG 57.697 47.619 0.00 0.00 0.00 2.90
474 475 0.255890 TAGGCTTTGGGGTGAGATGC 59.744 55.000 0.00 0.00 0.00 3.91
475 476 1.304381 GGCTTTGGGGTGAGATGCA 60.304 57.895 0.00 0.00 0.00 3.96
476 477 0.685458 GGCTTTGGGGTGAGATGCAT 60.685 55.000 0.00 0.00 0.00 3.96
477 478 1.410083 GGCTTTGGGGTGAGATGCATA 60.410 52.381 0.00 0.00 0.00 3.14
478 479 2.378038 GCTTTGGGGTGAGATGCATAA 58.622 47.619 0.00 0.00 0.00 1.90
479 480 2.760092 GCTTTGGGGTGAGATGCATAAA 59.240 45.455 0.00 0.00 0.00 1.40
480 481 3.195396 GCTTTGGGGTGAGATGCATAAAA 59.805 43.478 0.00 0.00 0.00 1.52
481 482 4.322650 GCTTTGGGGTGAGATGCATAAAAA 60.323 41.667 0.00 0.00 0.00 1.94
516 517 7.603180 ATGGACTTGTATAGAGAATAGTGCA 57.397 36.000 0.00 0.00 38.12 4.57
517 518 7.603180 TGGACTTGTATAGAGAATAGTGCAT 57.397 36.000 0.00 0.00 30.64 3.96
518 519 7.436933 TGGACTTGTATAGAGAATAGTGCATG 58.563 38.462 0.00 0.00 30.64 4.06
519 520 7.069950 TGGACTTGTATAGAGAATAGTGCATGT 59.930 37.037 0.00 0.00 30.64 3.21
520 521 8.577296 GGACTTGTATAGAGAATAGTGCATGTA 58.423 37.037 0.00 0.00 0.00 2.29
521 522 9.400638 GACTTGTATAGAGAATAGTGCATGTAC 57.599 37.037 5.71 5.71 0.00 2.90
522 523 9.137459 ACTTGTATAGAGAATAGTGCATGTACT 57.863 33.333 20.58 20.58 34.71 2.73
561 562 5.860941 TTTTTGTGTAGCTCCCATCAAAA 57.139 34.783 15.03 15.03 34.50 2.44
562 563 4.846779 TTTGTGTAGCTCCCATCAAAAC 57.153 40.909 0.00 0.00 0.00 2.43
563 564 2.422597 TGTGTAGCTCCCATCAAAACG 58.577 47.619 0.00 0.00 0.00 3.60
564 565 2.224426 TGTGTAGCTCCCATCAAAACGT 60.224 45.455 0.00 0.00 0.00 3.99
565 566 3.007074 TGTGTAGCTCCCATCAAAACGTA 59.993 43.478 0.00 0.00 0.00 3.57
566 567 4.189231 GTGTAGCTCCCATCAAAACGTAT 58.811 43.478 0.00 0.00 0.00 3.06
567 568 4.634443 GTGTAGCTCCCATCAAAACGTATT 59.366 41.667 0.00 0.00 0.00 1.89
568 569 5.123344 GTGTAGCTCCCATCAAAACGTATTT 59.877 40.000 0.00 0.00 0.00 1.40
569 570 4.965119 AGCTCCCATCAAAACGTATTTC 57.035 40.909 0.00 0.00 0.00 2.17
570 571 4.331968 AGCTCCCATCAAAACGTATTTCA 58.668 39.130 0.00 0.00 0.00 2.69
571 572 4.949856 AGCTCCCATCAAAACGTATTTCAT 59.050 37.500 0.00 0.00 0.00 2.57
572 573 5.066505 AGCTCCCATCAAAACGTATTTCATC 59.933 40.000 0.00 0.00 0.00 2.92
573 574 5.163663 GCTCCCATCAAAACGTATTTCATCA 60.164 40.000 0.00 0.00 0.00 3.07
574 575 6.460123 GCTCCCATCAAAACGTATTTCATCAT 60.460 38.462 0.00 0.00 0.00 2.45
575 576 6.794374 TCCCATCAAAACGTATTTCATCATG 58.206 36.000 0.00 0.00 0.00 3.07
576 577 6.601217 TCCCATCAAAACGTATTTCATCATGA 59.399 34.615 0.00 0.00 0.00 3.07
577 578 7.121907 TCCCATCAAAACGTATTTCATCATGAA 59.878 33.333 0.00 0.00 34.03 2.57
603 604 9.462606 AAAAATACAAAGATGTAGTCCCTAAGG 57.537 33.333 0.00 0.00 44.85 2.69
604 605 7.750947 AATACAAAGATGTAGTCCCTAAGGT 57.249 36.000 0.00 0.00 44.85 3.50
605 606 7.750947 ATACAAAGATGTAGTCCCTAAGGTT 57.249 36.000 0.00 0.00 44.85 3.50
606 607 6.051179 ACAAAGATGTAGTCCCTAAGGTTC 57.949 41.667 0.00 0.00 38.24 3.62
607 608 5.546499 ACAAAGATGTAGTCCCTAAGGTTCA 59.454 40.000 0.00 0.00 38.24 3.18
608 609 6.215636 ACAAAGATGTAGTCCCTAAGGTTCAT 59.784 38.462 0.00 0.00 38.24 2.57
609 610 5.878406 AGATGTAGTCCCTAAGGTTCATG 57.122 43.478 0.00 0.00 0.00 3.07
610 611 5.281314 AGATGTAGTCCCTAAGGTTCATGT 58.719 41.667 0.00 0.00 0.00 3.21
611 612 4.819105 TGTAGTCCCTAAGGTTCATGTG 57.181 45.455 0.00 0.00 0.00 3.21
612 613 4.164981 TGTAGTCCCTAAGGTTCATGTGT 58.835 43.478 0.00 0.00 0.00 3.72
613 614 5.335261 TGTAGTCCCTAAGGTTCATGTGTA 58.665 41.667 0.00 0.00 0.00 2.90
614 615 5.962031 TGTAGTCCCTAAGGTTCATGTGTAT 59.038 40.000 0.00 0.00 0.00 2.29
615 616 6.442564 TGTAGTCCCTAAGGTTCATGTGTATT 59.557 38.462 0.00 0.00 0.00 1.89
616 617 5.990668 AGTCCCTAAGGTTCATGTGTATTC 58.009 41.667 0.00 0.00 0.00 1.75
617 618 5.726793 AGTCCCTAAGGTTCATGTGTATTCT 59.273 40.000 0.00 0.00 0.00 2.40
618 619 6.049790 GTCCCTAAGGTTCATGTGTATTCTC 58.950 44.000 0.00 0.00 0.00 2.87
619 620 5.964477 TCCCTAAGGTTCATGTGTATTCTCT 59.036 40.000 0.00 0.00 0.00 3.10
620 621 6.098409 TCCCTAAGGTTCATGTGTATTCTCTC 59.902 42.308 0.00 0.00 0.00 3.20
621 622 6.127054 CCCTAAGGTTCATGTGTATTCTCTCA 60.127 42.308 0.00 0.00 0.00 3.27
622 623 7.419518 CCCTAAGGTTCATGTGTATTCTCTCAT 60.420 40.741 0.00 0.00 0.00 2.90
623 624 8.642432 CCTAAGGTTCATGTGTATTCTCTCATA 58.358 37.037 0.00 0.00 0.00 2.15
626 627 9.911788 AAGGTTCATGTGTATTCTCTCATATTT 57.088 29.630 0.00 0.00 0.00 1.40
627 628 9.911788 AGGTTCATGTGTATTCTCTCATATTTT 57.088 29.630 0.00 0.00 0.00 1.82
685 686 9.988815 TTTTAAGAAGAGATATCCATGTAGCTC 57.011 33.333 0.00 1.40 37.37 4.09
686 687 5.895636 AGAAGAGATATCCATGTAGCTCG 57.104 43.478 0.00 0.00 40.93 5.03
687 688 5.565509 AGAAGAGATATCCATGTAGCTCGA 58.434 41.667 0.00 0.00 40.93 4.04
688 689 5.647658 AGAAGAGATATCCATGTAGCTCGAG 59.352 44.000 8.45 8.45 40.93 4.04
689 690 3.694072 AGAGATATCCATGTAGCTCGAGC 59.306 47.826 30.01 30.01 40.93 5.03
690 691 3.425659 AGATATCCATGTAGCTCGAGCA 58.574 45.455 36.87 21.06 45.16 4.26
691 692 3.443329 AGATATCCATGTAGCTCGAGCAG 59.557 47.826 36.87 20.46 45.16 4.24
692 693 1.407936 ATCCATGTAGCTCGAGCAGT 58.592 50.000 36.87 21.32 45.16 4.40
693 694 2.052782 TCCATGTAGCTCGAGCAGTA 57.947 50.000 36.87 22.62 45.16 2.74
694 695 2.375146 TCCATGTAGCTCGAGCAGTAA 58.625 47.619 36.87 20.44 45.16 2.24
695 696 2.099263 TCCATGTAGCTCGAGCAGTAAC 59.901 50.000 36.87 26.77 45.16 2.50
696 697 2.159240 CCATGTAGCTCGAGCAGTAACA 60.159 50.000 36.87 30.64 45.16 2.41
697 698 2.921634 TGTAGCTCGAGCAGTAACAG 57.078 50.000 36.87 0.00 45.16 3.16
698 699 2.160205 TGTAGCTCGAGCAGTAACAGT 58.840 47.619 36.87 17.60 45.16 3.55
699 700 2.161808 TGTAGCTCGAGCAGTAACAGTC 59.838 50.000 36.87 16.20 45.16 3.51
700 701 1.248486 AGCTCGAGCAGTAACAGTCA 58.752 50.000 36.87 0.00 45.16 3.41
701 702 1.821753 AGCTCGAGCAGTAACAGTCAT 59.178 47.619 36.87 10.86 45.16 3.06
702 703 2.232452 AGCTCGAGCAGTAACAGTCATT 59.768 45.455 36.87 10.65 45.16 2.57
703 704 2.996621 GCTCGAGCAGTAACAGTCATTT 59.003 45.455 31.91 0.00 41.59 2.32
704 705 3.433615 GCTCGAGCAGTAACAGTCATTTT 59.566 43.478 31.91 0.00 41.59 1.82
705 706 4.434857 GCTCGAGCAGTAACAGTCATTTTC 60.435 45.833 31.91 0.00 41.59 2.29
706 707 3.673338 TCGAGCAGTAACAGTCATTTTCG 59.327 43.478 0.00 0.00 0.00 3.46
707 708 3.673338 CGAGCAGTAACAGTCATTTTCGA 59.327 43.478 0.00 0.00 0.00 3.71
708 709 4.433022 CGAGCAGTAACAGTCATTTTCGAC 60.433 45.833 0.00 0.00 36.08 4.20
710 711 5.057149 AGCAGTAACAGTCATTTTCGACTT 58.943 37.500 0.00 0.00 43.84 3.01
711 712 6.220930 AGCAGTAACAGTCATTTTCGACTTA 58.779 36.000 0.00 0.00 43.84 2.24
712 713 6.145696 AGCAGTAACAGTCATTTTCGACTTAC 59.854 38.462 0.00 0.00 43.84 2.34
713 714 6.073980 GCAGTAACAGTCATTTTCGACTTACA 60.074 38.462 0.00 0.00 43.84 2.41
714 715 7.360101 GCAGTAACAGTCATTTTCGACTTACAT 60.360 37.037 0.00 0.00 43.84 2.29
738 739 6.910536 ACCTTATTTTACTTGCTCTCATCG 57.089 37.500 0.00 0.00 0.00 3.84
749 750 5.578727 ACTTGCTCTCATCGAGTGAATTAAC 59.421 40.000 0.00 0.00 41.98 2.01
757 759 4.866508 TCGAGTGAATTAACAGTGGACT 57.133 40.909 0.00 0.00 0.00 3.85
853 858 3.777925 CGCCCGAAGCAGACAACG 61.778 66.667 0.00 0.00 44.04 4.10
888 893 2.226330 CTACATCTCCTCTCCTCACCG 58.774 57.143 0.00 0.00 0.00 4.94
908 913 2.108514 CGCCGCCATTCACTCACAT 61.109 57.895 0.00 0.00 0.00 3.21
909 914 0.809636 CGCCGCCATTCACTCACATA 60.810 55.000 0.00 0.00 0.00 2.29
910 915 0.657840 GCCGCCATTCACTCACATAC 59.342 55.000 0.00 0.00 0.00 2.39
976 993 4.504916 CGGGCTCCTCGTGCTCTG 62.505 72.222 0.00 0.00 0.00 3.35
977 994 4.828925 GGGCTCCTCGTGCTCTGC 62.829 72.222 0.00 0.00 0.00 4.26
978 995 3.768922 GGCTCCTCGTGCTCTGCT 61.769 66.667 0.00 0.00 0.00 4.24
979 996 2.418910 GGCTCCTCGTGCTCTGCTA 61.419 63.158 0.00 0.00 0.00 3.49
980 997 1.739049 GCTCCTCGTGCTCTGCTAT 59.261 57.895 0.00 0.00 0.00 2.97
1033 1050 1.033574 GCTCCTGCCGTACATCTACT 58.966 55.000 0.00 0.00 0.00 2.57
1162 2153 2.043852 ACATCGTCTCCCGCCTCT 60.044 61.111 0.00 0.00 36.19 3.69
1260 2251 0.337082 TCGATACCCACCTCCTGGAA 59.663 55.000 0.00 0.00 43.95 3.53
1479 2491 3.082579 GCGCGAGGTGAATCTCCCT 62.083 63.158 12.10 0.00 0.00 4.20
1620 2635 3.971894 GTCATGGAGGACGGGGAT 58.028 61.111 0.00 0.00 0.00 3.85
1767 2789 1.030488 AGATCGTCGTCGTGGTGGAT 61.030 55.000 1.33 0.00 38.33 3.41
1819 2841 3.117552 AGGTTCGGGGATCTCTAAACT 57.882 47.619 9.50 2.66 0.00 2.66
1873 2895 0.321346 CAATGCCCCCAACCTGAAAC 59.679 55.000 0.00 0.00 0.00 2.78
1874 2896 1.184970 AATGCCCCCAACCTGAAACG 61.185 55.000 0.00 0.00 0.00 3.60
1951 2983 6.387041 TCATGGTAGATCACGTACCTAAAG 57.613 41.667 10.16 0.50 40.70 1.85
2047 3108 1.586028 GGATGAAGCCAAGCGCAAA 59.414 52.632 11.47 0.00 41.38 3.68
2118 3182 3.117625 AGTCCATGATGATGCCAAGATGT 60.118 43.478 0.00 0.00 0.00 3.06
2199 3265 2.609747 TCATCACCACCCTATAGGCTC 58.390 52.381 13.85 0.00 40.58 4.70
2211 3277 6.784969 CACCCTATAGGCTCCTAGCATTATAT 59.215 42.308 13.85 0.00 44.75 0.86
2259 3325 0.517316 GCAAACTAGTGCCGTCCTTG 59.483 55.000 0.00 0.00 38.66 3.61
2265 3331 4.755266 ACTAGTGCCGTCCTTGAAATAT 57.245 40.909 0.00 0.00 0.00 1.28
2271 3337 4.065088 TGCCGTCCTTGAAATATGCTATC 58.935 43.478 0.00 0.00 0.00 2.08
2272 3338 4.202357 TGCCGTCCTTGAAATATGCTATCT 60.202 41.667 0.00 0.00 0.00 1.98
2273 3339 4.757149 GCCGTCCTTGAAATATGCTATCTT 59.243 41.667 0.00 0.00 0.00 2.40
2274 3340 5.334414 GCCGTCCTTGAAATATGCTATCTTG 60.334 44.000 0.00 0.00 0.00 3.02
2275 3341 5.760253 CCGTCCTTGAAATATGCTATCTTGT 59.240 40.000 0.00 0.00 0.00 3.16
2276 3342 6.929049 CCGTCCTTGAAATATGCTATCTTGTA 59.071 38.462 0.00 0.00 0.00 2.41
2306 3409 7.498900 AGACATCGTCCATTGATTTATTTAGCA 59.501 33.333 0.00 0.00 32.18 3.49
2329 3432 7.966157 CAAGACATTGCTTAGAATGCTTTAG 57.034 36.000 0.00 0.00 36.89 1.85
2441 3545 6.260050 TGAACTGTTCACTGACTTAACCAATC 59.740 38.462 18.69 0.00 34.08 2.67
2491 3598 3.399330 TGGGAAGCTCGAACTTAAGTTG 58.601 45.455 25.17 16.30 38.56 3.16
2512 3619 0.853530 GGGATGAGGTTGGCCCTATT 59.146 55.000 0.00 0.00 46.51 1.73
2623 3731 3.664495 CAAGGGTGCTGACTGCTG 58.336 61.111 5.87 0.00 43.37 4.41
2624 3732 1.071987 CAAGGGTGCTGACTGCTGA 59.928 57.895 5.87 0.00 43.37 4.26
2686 3794 4.715523 TCAAGGGCGAAAGGGCGG 62.716 66.667 0.00 0.00 43.46 6.13
2715 3823 3.553922 GCGGGGAATCTGACTAATCTGAG 60.554 52.174 0.00 0.00 36.37 3.35
2733 3841 2.771943 TGAGATGGGGCAGTACTAAAGG 59.228 50.000 0.00 0.00 0.00 3.11
2752 3977 1.645455 CTGCGGAATCATCCAAGCG 59.355 57.895 0.00 0.00 46.97 4.68
2759 3984 3.059597 CGGAATCATCCAAGCGTAATGTC 60.060 47.826 0.00 0.00 46.97 3.06
2761 3986 1.934589 TCATCCAAGCGTAATGTCCG 58.065 50.000 0.00 0.00 0.00 4.79
2763 3988 2.006888 CATCCAAGCGTAATGTCCGTT 58.993 47.619 0.00 0.00 0.00 4.44
2764 3989 1.434555 TCCAAGCGTAATGTCCGTTG 58.565 50.000 0.00 0.00 0.00 4.10
2765 3990 0.446222 CCAAGCGTAATGTCCGTTGG 59.554 55.000 0.00 0.00 33.54 3.77
2766 3991 1.434555 CAAGCGTAATGTCCGTTGGA 58.565 50.000 0.00 0.00 0.00 3.53
2767 3992 1.393539 CAAGCGTAATGTCCGTTGGAG 59.606 52.381 0.00 0.00 29.39 3.86
2768 3993 0.606604 AGCGTAATGTCCGTTGGAGT 59.393 50.000 0.00 0.00 29.39 3.85
2783 4008 0.759346 GGAGTGGAGTGGTCAGTGTT 59.241 55.000 0.00 0.00 0.00 3.32
2797 4022 3.725740 GTCAGTGTTCTTTTGCAACATCG 59.274 43.478 0.00 0.00 36.19 3.84
2798 4023 3.376859 TCAGTGTTCTTTTGCAACATCGT 59.623 39.130 0.00 0.00 36.19 3.73
2799 4024 4.572795 TCAGTGTTCTTTTGCAACATCGTA 59.427 37.500 0.00 0.00 36.19 3.43
2813 4038 2.353889 ACATCGTACTACAAGCGATCGT 59.646 45.455 17.81 0.26 42.48 3.73
2819 4044 2.073816 ACTACAAGCGATCGTTTTGGG 58.926 47.619 26.64 21.98 0.00 4.12
2820 4045 0.800012 TACAAGCGATCGTTTTGGGC 59.200 50.000 26.64 8.45 0.00 5.36
2821 4046 1.169661 ACAAGCGATCGTTTTGGGCA 61.170 50.000 26.64 0.00 0.00 5.36
2869 4114 1.837439 TGAAGTGTTGAGGTCAGTGGT 59.163 47.619 0.00 0.00 0.00 4.16
2879 4124 1.344763 AGGTCAGTGGTGCTACTGTTC 59.655 52.381 13.89 9.26 46.32 3.18
2886 4131 1.003118 TGGTGCTACTGTTCATGGACC 59.997 52.381 0.46 0.00 40.58 4.46
2968 4217 3.136443 TGGGCTTATCTTGGTAGTGATGG 59.864 47.826 0.00 0.00 0.00 3.51
2969 4218 3.142174 GGCTTATCTTGGTAGTGATGGC 58.858 50.000 0.00 0.00 0.00 4.40
2977 4226 0.179062 GGTAGTGATGGCTGCCTGAG 60.179 60.000 21.03 0.00 38.09 3.35
2983 4232 0.813821 GATGGCTGCCTGAGAAAACC 59.186 55.000 21.03 0.00 0.00 3.27
3026 4342 4.853924 TTTGGCTTCTCTTTGGCTTAAG 57.146 40.909 0.00 0.00 0.00 1.85
3027 4343 3.508845 TGGCTTCTCTTTGGCTTAAGT 57.491 42.857 4.02 0.00 0.00 2.24
3028 4344 4.634012 TGGCTTCTCTTTGGCTTAAGTA 57.366 40.909 4.02 0.00 0.00 2.24
3029 4345 4.579869 TGGCTTCTCTTTGGCTTAAGTAG 58.420 43.478 4.02 0.00 0.00 2.57
3030 4346 4.041691 TGGCTTCTCTTTGGCTTAAGTAGT 59.958 41.667 4.02 0.00 0.00 2.73
3079 4395 1.453745 AATCCATGCACGGCGGATT 60.454 52.632 13.24 13.18 43.23 3.01
3097 4413 5.220491 GCGGATTGAATCTTGTTGTCTACTC 60.220 44.000 5.03 0.00 0.00 2.59
3098 4414 5.292101 CGGATTGAATCTTGTTGTCTACTCC 59.708 44.000 5.03 0.00 0.00 3.85
3099 4415 6.173339 GGATTGAATCTTGTTGTCTACTCCA 58.827 40.000 5.03 0.00 0.00 3.86
3100 4416 6.092807 GGATTGAATCTTGTTGTCTACTCCAC 59.907 42.308 5.03 0.00 0.00 4.02
3101 4417 5.808366 TGAATCTTGTTGTCTACTCCACT 57.192 39.130 0.00 0.00 0.00 4.00
3102 4418 5.784177 TGAATCTTGTTGTCTACTCCACTC 58.216 41.667 0.00 0.00 0.00 3.51
3103 4419 3.917329 TCTTGTTGTCTACTCCACTCG 57.083 47.619 0.00 0.00 0.00 4.18
3104 4420 3.220110 TCTTGTTGTCTACTCCACTCGT 58.780 45.455 0.00 0.00 0.00 4.18
3105 4421 4.392047 TCTTGTTGTCTACTCCACTCGTA 58.608 43.478 0.00 0.00 0.00 3.43
3106 4422 5.008331 TCTTGTTGTCTACTCCACTCGTAT 58.992 41.667 0.00 0.00 0.00 3.06
3113 4429 5.121811 GTCTACTCCACTCGTATGGTTAGA 58.878 45.833 7.44 10.68 40.95 2.10
3135 4451 4.280819 ACCCTGTACAATGCAATGCTTAT 58.719 39.130 6.82 0.00 0.00 1.73
3148 4464 4.591202 CAATGCTTATTCGTGGTGCTTAG 58.409 43.478 0.00 0.00 0.00 2.18
3149 4465 3.603158 TGCTTATTCGTGGTGCTTAGA 57.397 42.857 0.00 0.00 0.00 2.10
3150 4466 3.521560 TGCTTATTCGTGGTGCTTAGAG 58.478 45.455 0.00 0.00 0.00 2.43
3151 4467 2.285488 GCTTATTCGTGGTGCTTAGAGC 59.715 50.000 0.00 0.00 42.82 4.09
3402 4718 1.826327 CATAAAAATCGCCGCCTGTG 58.174 50.000 0.00 0.00 0.00 3.66
3403 4719 0.738389 ATAAAAATCGCCGCCTGTGG 59.262 50.000 0.00 0.00 0.00 4.17
3404 4720 1.309499 TAAAAATCGCCGCCTGTGGG 61.309 55.000 0.00 0.00 0.00 4.61
3429 4745 4.536687 GCGGCAAAATCGGCTCGG 62.537 66.667 0.00 0.00 0.00 4.63
3430 4746 3.876198 CGGCAAAATCGGCTCGGG 61.876 66.667 0.00 0.00 0.00 5.14
3431 4747 3.518068 GGCAAAATCGGCTCGGGG 61.518 66.667 0.00 0.00 0.00 5.73
3432 4748 3.518068 GCAAAATCGGCTCGGGGG 61.518 66.667 0.00 0.00 0.00 5.40
3433 4749 3.518068 CAAAATCGGCTCGGGGGC 61.518 66.667 0.00 0.00 37.12 5.80
3471 4787 2.362889 CCCCCAGGCAGCGATTTT 60.363 61.111 0.00 0.00 0.00 1.82
3472 4788 2.713967 CCCCCAGGCAGCGATTTTG 61.714 63.158 0.00 0.00 0.00 2.44
3473 4789 2.713967 CCCCAGGCAGCGATTTTGG 61.714 63.158 0.00 0.00 0.00 3.28
3474 4790 2.182537 CCAGGCAGCGATTTTGGC 59.817 61.111 0.00 0.00 41.05 4.52
3475 4791 2.182537 CAGGCAGCGATTTTGGCC 59.817 61.111 0.00 0.00 46.77 5.36
3477 4793 3.381136 GGCAGCGATTTTGGCCCA 61.381 61.111 0.00 0.00 40.55 5.36
3478 4794 2.724273 GGCAGCGATTTTGGCCCAT 61.724 57.895 0.00 0.00 40.55 4.00
3479 4795 1.218854 GCAGCGATTTTGGCCCATT 59.781 52.632 0.00 0.00 0.00 3.16
3480 4796 0.459489 GCAGCGATTTTGGCCCATTA 59.541 50.000 0.00 0.00 0.00 1.90
3481 4797 1.069049 GCAGCGATTTTGGCCCATTAT 59.931 47.619 0.00 0.00 0.00 1.28
3482 4798 2.483538 GCAGCGATTTTGGCCCATTATT 60.484 45.455 0.00 0.00 0.00 1.40
3483 4799 3.383761 CAGCGATTTTGGCCCATTATTC 58.616 45.455 0.00 0.00 0.00 1.75
3484 4800 2.034558 AGCGATTTTGGCCCATTATTCG 59.965 45.455 0.00 2.77 0.00 3.34
3485 4801 2.862140 GCGATTTTGGCCCATTATTCGG 60.862 50.000 0.00 0.00 0.00 4.30
3486 4802 2.754472 GATTTTGGCCCATTATTCGGC 58.246 47.619 0.00 0.00 44.92 5.54
3490 4806 3.443588 GCCCATTATTCGGCCCAC 58.556 61.111 0.00 0.00 39.39 4.61
3491 4807 1.152756 GCCCATTATTCGGCCCACT 60.153 57.895 0.00 0.00 39.39 4.00
3492 4808 0.755327 GCCCATTATTCGGCCCACTT 60.755 55.000 0.00 0.00 39.39 3.16
3493 4809 1.775385 CCCATTATTCGGCCCACTTT 58.225 50.000 0.00 0.00 0.00 2.66
3494 4810 1.681264 CCCATTATTCGGCCCACTTTC 59.319 52.381 0.00 0.00 0.00 2.62
3495 4811 1.333619 CCATTATTCGGCCCACTTTCG 59.666 52.381 0.00 0.00 0.00 3.46
3496 4812 2.014128 CATTATTCGGCCCACTTTCGT 58.986 47.619 0.00 0.00 0.00 3.85
3497 4813 1.729284 TTATTCGGCCCACTTTCGTC 58.271 50.000 0.00 0.00 0.00 4.20
3498 4814 0.609151 TATTCGGCCCACTTTCGTCA 59.391 50.000 0.00 0.00 0.00 4.35
3499 4815 0.250553 ATTCGGCCCACTTTCGTCAA 60.251 50.000 0.00 0.00 0.00 3.18
3500 4816 0.464013 TTCGGCCCACTTTCGTCAAA 60.464 50.000 0.00 0.00 0.00 2.69
3501 4817 0.464013 TCGGCCCACTTTCGTCAAAA 60.464 50.000 0.00 0.00 0.00 2.44
3502 4818 0.382515 CGGCCCACTTTCGTCAAAAA 59.617 50.000 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.961394 GTGTAGCCATCCCGTGATCTA 59.039 52.381 0.00 0.00 0.00 1.98
1 2 0.753262 GTGTAGCCATCCCGTGATCT 59.247 55.000 0.00 0.00 0.00 2.75
2 3 0.464036 TGTGTAGCCATCCCGTGATC 59.536 55.000 0.00 0.00 0.00 2.92
4 5 0.613572 TCTGTGTAGCCATCCCGTGA 60.614 55.000 0.00 0.00 0.00 4.35
5 6 0.179100 CTCTGTGTAGCCATCCCGTG 60.179 60.000 0.00 0.00 0.00 4.94
8 9 0.103208 CGACTCTGTGTAGCCATCCC 59.897 60.000 0.00 0.00 0.00 3.85
9 10 1.103803 TCGACTCTGTGTAGCCATCC 58.896 55.000 0.00 0.00 0.00 3.51
10 11 2.544694 CCATCGACTCTGTGTAGCCATC 60.545 54.545 0.00 0.00 0.00 3.51
11 12 1.410517 CCATCGACTCTGTGTAGCCAT 59.589 52.381 0.00 0.00 0.00 4.40
12 13 0.817654 CCATCGACTCTGTGTAGCCA 59.182 55.000 0.00 0.00 0.00 4.75
13 14 0.528684 GCCATCGACTCTGTGTAGCC 60.529 60.000 0.00 0.00 0.00 3.93
14 15 0.528684 GGCCATCGACTCTGTGTAGC 60.529 60.000 0.00 0.00 0.00 3.58
15 16 0.248661 CGGCCATCGACTCTGTGTAG 60.249 60.000 2.24 0.00 42.43 2.74
16 17 1.663379 CCGGCCATCGACTCTGTGTA 61.663 60.000 2.24 0.00 42.43 2.90
17 18 2.573869 CGGCCATCGACTCTGTGT 59.426 61.111 2.24 0.00 42.43 3.72
18 19 2.202797 CCGGCCATCGACTCTGTG 60.203 66.667 2.24 0.00 42.43 3.66
19 20 3.461773 CCCGGCCATCGACTCTGT 61.462 66.667 2.24 0.00 42.43 3.41
20 21 4.899239 GCCCGGCCATCGACTCTG 62.899 72.222 2.24 0.00 42.43 3.35
22 23 4.899239 CTGCCCGGCCATCGACTC 62.899 72.222 7.03 0.00 42.43 3.36
24 25 4.899239 CTCTGCCCGGCCATCGAC 62.899 72.222 7.03 0.00 42.43 4.20
44 45 0.806868 CACACATTGCTGCTACCCAG 59.193 55.000 0.00 0.00 44.67 4.45
45 46 2.945510 CACACATTGCTGCTACCCA 58.054 52.632 0.00 0.00 0.00 4.51
55 56 1.069703 CACGTGAAGGAGCACACATTG 60.070 52.381 10.90 0.00 38.69 2.82
56 57 1.229428 CACGTGAAGGAGCACACATT 58.771 50.000 10.90 0.00 38.69 2.71
57 58 0.603707 CCACGTGAAGGAGCACACAT 60.604 55.000 19.30 0.00 38.69 3.21
58 59 1.227527 CCACGTGAAGGAGCACACA 60.228 57.895 19.30 0.00 38.69 3.72
59 60 2.607892 GCCACGTGAAGGAGCACAC 61.608 63.158 19.30 0.00 38.69 3.82
60 61 2.280797 GCCACGTGAAGGAGCACA 60.281 61.111 19.30 0.00 38.69 4.57
61 62 1.639298 GATGCCACGTGAAGGAGCAC 61.639 60.000 19.30 8.53 35.34 4.40
62 63 1.375908 GATGCCACGTGAAGGAGCA 60.376 57.895 19.30 17.84 36.62 4.26
63 64 2.109126 GGATGCCACGTGAAGGAGC 61.109 63.158 19.30 12.11 0.00 4.70
64 65 1.450312 GGGATGCCACGTGAAGGAG 60.450 63.158 19.30 0.00 0.00 3.69
65 66 2.668632 GGGATGCCACGTGAAGGA 59.331 61.111 19.30 2.17 0.00 3.36
66 67 2.438434 GGGGATGCCACGTGAAGG 60.438 66.667 19.30 0.50 0.00 3.46
67 68 2.819595 CGGGGATGCCACGTGAAG 60.820 66.667 19.30 1.58 46.51 3.02
76 77 2.588034 GAACTACGGCGGGGATGC 60.588 66.667 13.24 0.00 0.00 3.91
77 78 2.279252 CGAACTACGGCGGGGATG 60.279 66.667 13.24 0.00 38.46 3.51
78 79 4.217159 GCGAACTACGGCGGGGAT 62.217 66.667 13.24 0.00 42.83 3.85
80 81 4.867599 GAGCGAACTACGGCGGGG 62.868 72.222 13.24 5.77 42.83 5.73
82 83 4.471726 ACGAGCGAACTACGGCGG 62.472 66.667 13.24 0.00 42.83 6.13
83 84 2.943034 GACGAGCGAACTACGGCG 60.943 66.667 4.80 4.80 42.83 6.46
84 85 2.578981 GGACGAGCGAACTACGGC 60.579 66.667 0.00 0.00 42.83 5.68
85 86 2.277120 CGGACGAGCGAACTACGG 60.277 66.667 0.00 0.00 42.83 4.02
86 87 2.277120 CCGGACGAGCGAACTACG 60.277 66.667 0.00 0.00 45.66 3.51
87 88 2.101770 CCCGGACGAGCGAACTAC 59.898 66.667 0.73 0.00 0.00 2.73
88 89 3.136123 CCCCGGACGAGCGAACTA 61.136 66.667 0.73 0.00 0.00 2.24
103 104 4.832608 CTACTCCGGTTGCGGCCC 62.833 72.222 0.00 0.00 0.00 5.80
104 105 2.973180 GATCTACTCCGGTTGCGGCC 62.973 65.000 0.00 0.00 0.00 6.13
105 106 1.591863 GATCTACTCCGGTTGCGGC 60.592 63.158 0.00 0.00 0.00 6.53
106 107 0.527817 GTGATCTACTCCGGTTGCGG 60.528 60.000 0.00 0.00 0.00 5.69
107 108 0.866061 CGTGATCTACTCCGGTTGCG 60.866 60.000 0.00 0.00 0.00 4.85
108 109 1.146358 GCGTGATCTACTCCGGTTGC 61.146 60.000 0.00 0.00 0.00 4.17
109 110 0.172578 TGCGTGATCTACTCCGGTTG 59.827 55.000 0.00 0.00 0.00 3.77
110 111 1.067212 GATGCGTGATCTACTCCGGTT 59.933 52.381 0.00 0.00 0.00 4.44
111 112 0.669077 GATGCGTGATCTACTCCGGT 59.331 55.000 0.00 0.00 0.00 5.28
112 113 0.668535 TGATGCGTGATCTACTCCGG 59.331 55.000 0.00 0.00 31.55 5.14
113 114 1.759994 GTGATGCGTGATCTACTCCG 58.240 55.000 0.00 0.00 31.55 4.63
114 115 1.600663 CCGTGATGCGTGATCTACTCC 60.601 57.143 0.00 0.00 39.32 3.85
115 116 1.600663 CCCGTGATGCGTGATCTACTC 60.601 57.143 0.00 0.00 39.32 2.59
116 117 0.385751 CCCGTGATGCGTGATCTACT 59.614 55.000 0.00 0.00 39.32 2.57
117 118 1.215655 GCCCGTGATGCGTGATCTAC 61.216 60.000 0.00 0.00 39.32 2.59
118 119 1.067416 GCCCGTGATGCGTGATCTA 59.933 57.895 0.00 0.00 39.32 1.98
119 120 2.202932 GCCCGTGATGCGTGATCT 60.203 61.111 0.00 0.00 39.32 2.75
120 121 3.630148 CGCCCGTGATGCGTGATC 61.630 66.667 0.00 0.00 46.59 2.92
147 148 2.361567 GCCATCCCAGCCAAAAGGG 61.362 63.158 0.00 0.00 46.90 3.95
148 149 2.713967 CGCCATCCCAGCCAAAAGG 61.714 63.158 0.00 0.00 0.00 3.11
149 150 2.713967 CCGCCATCCCAGCCAAAAG 61.714 63.158 0.00 0.00 0.00 2.27
150 151 2.679642 CCGCCATCCCAGCCAAAA 60.680 61.111 0.00 0.00 0.00 2.44
165 166 3.764466 ACCTCCTTCTGCGAGCCG 61.764 66.667 0.00 0.00 0.00 5.52
166 167 2.125350 CACCTCCTTCTGCGAGCC 60.125 66.667 0.00 0.00 0.00 4.70
167 168 1.153667 CTCACCTCCTTCTGCGAGC 60.154 63.158 0.00 0.00 0.00 5.03
168 169 1.153667 GCTCACCTCCTTCTGCGAG 60.154 63.158 0.00 0.00 0.00 5.03
169 170 2.973899 GCTCACCTCCTTCTGCGA 59.026 61.111 0.00 0.00 0.00 5.10
170 171 2.507992 CGCTCACCTCCTTCTGCG 60.508 66.667 0.00 0.00 37.57 5.18
171 172 2.125350 CCGCTCACCTCCTTCTGC 60.125 66.667 0.00 0.00 0.00 4.26
172 173 2.125350 GCCGCTCACCTCCTTCTG 60.125 66.667 0.00 0.00 0.00 3.02
173 174 3.764466 CGCCGCTCACCTCCTTCT 61.764 66.667 0.00 0.00 0.00 2.85
174 175 4.821589 CCGCCGCTCACCTCCTTC 62.822 72.222 0.00 0.00 0.00 3.46
193 194 3.371097 TAGCTGCCGCTAGTGCACC 62.371 63.158 14.63 0.00 46.79 5.01
194 195 2.184322 TAGCTGCCGCTAGTGCAC 59.816 61.111 9.40 9.40 46.79 4.57
206 207 2.755542 CTACCTCGCGCCCATAGCTG 62.756 65.000 0.00 0.00 40.39 4.24
207 208 2.520982 TACCTCGCGCCCATAGCT 60.521 61.111 0.00 0.00 40.39 3.32
208 209 2.049063 CTACCTCGCGCCCATAGC 60.049 66.667 0.00 0.00 38.52 2.97
209 210 2.651361 CCTACCTCGCGCCCATAG 59.349 66.667 0.00 0.12 0.00 2.23
210 211 3.612681 GCCTACCTCGCGCCCATA 61.613 66.667 0.00 0.00 0.00 2.74
241 242 4.222847 CCTTCTCCCGGCTACGCC 62.223 72.222 0.00 0.00 46.75 5.68
242 243 2.423290 GATCCTTCTCCCGGCTACGC 62.423 65.000 0.00 0.00 39.22 4.42
243 244 1.660917 GATCCTTCTCCCGGCTACG 59.339 63.158 0.00 0.00 40.55 3.51
244 245 1.660917 CGATCCTTCTCCCGGCTAC 59.339 63.158 0.00 0.00 0.00 3.58
245 246 1.530891 CCGATCCTTCTCCCGGCTA 60.531 63.158 0.00 0.00 35.29 3.93
246 247 2.840102 CCGATCCTTCTCCCGGCT 60.840 66.667 0.00 0.00 35.29 5.52
247 248 3.930012 CCCGATCCTTCTCCCGGC 61.930 72.222 0.00 0.00 40.56 6.13
248 249 3.234730 CCCCGATCCTTCTCCCGG 61.235 72.222 0.00 0.00 41.47 5.73
249 250 2.444140 ACCCCGATCCTTCTCCCG 60.444 66.667 0.00 0.00 0.00 5.14
250 251 2.444256 CCACCCCGATCCTTCTCCC 61.444 68.421 0.00 0.00 0.00 4.30
251 252 3.108288 GCCACCCCGATCCTTCTCC 62.108 68.421 0.00 0.00 0.00 3.71
252 253 1.700042 ATGCCACCCCGATCCTTCTC 61.700 60.000 0.00 0.00 0.00 2.87
253 254 1.694169 ATGCCACCCCGATCCTTCT 60.694 57.895 0.00 0.00 0.00 2.85
254 255 1.227973 GATGCCACCCCGATCCTTC 60.228 63.158 0.00 0.00 0.00 3.46
255 256 2.757124 GGATGCCACCCCGATCCTT 61.757 63.158 0.00 0.00 34.00 3.36
256 257 3.171388 GGATGCCACCCCGATCCT 61.171 66.667 0.00 0.00 34.00 3.24
257 258 3.488569 TGGATGCCACCCCGATCC 61.489 66.667 0.00 0.00 36.87 3.36
268 269 1.890979 CTCCTGGCGATGTGGATGC 60.891 63.158 0.00 0.00 0.00 3.91
269 270 0.752658 TACTCCTGGCGATGTGGATG 59.247 55.000 0.00 0.00 0.00 3.51
270 271 1.043816 CTACTCCTGGCGATGTGGAT 58.956 55.000 0.00 0.00 0.00 3.41
271 272 1.043116 CCTACTCCTGGCGATGTGGA 61.043 60.000 0.00 0.00 0.00 4.02
272 273 1.043116 TCCTACTCCTGGCGATGTGG 61.043 60.000 0.00 0.00 0.00 4.17
273 274 0.387202 CTCCTACTCCTGGCGATGTG 59.613 60.000 0.00 0.00 0.00 3.21
274 275 1.395826 GCTCCTACTCCTGGCGATGT 61.396 60.000 0.00 0.00 0.00 3.06
275 276 1.365633 GCTCCTACTCCTGGCGATG 59.634 63.158 0.00 0.00 0.00 3.84
276 277 3.863606 GCTCCTACTCCTGGCGAT 58.136 61.111 0.00 0.00 0.00 4.58
279 280 4.577246 CGCGCTCCTACTCCTGGC 62.577 72.222 5.56 0.00 0.00 4.85
280 281 3.905678 CCGCGCTCCTACTCCTGG 61.906 72.222 5.56 0.00 0.00 4.45
281 282 4.577246 GCCGCGCTCCTACTCCTG 62.577 72.222 5.56 0.00 0.00 3.86
284 285 4.189188 TTCGCCGCGCTCCTACTC 62.189 66.667 8.21 0.00 0.00 2.59
285 286 4.194720 CTTCGCCGCGCTCCTACT 62.195 66.667 8.21 0.00 0.00 2.57
306 307 3.672295 CTCCTTCTCCTGGCCACGC 62.672 68.421 0.00 0.00 0.00 5.34
307 308 2.581354 CTCCTTCTCCTGGCCACG 59.419 66.667 0.00 0.00 0.00 4.94
308 309 2.270527 GCTCCTTCTCCTGGCCAC 59.729 66.667 0.00 0.00 0.00 5.01
309 310 3.393970 CGCTCCTTCTCCTGGCCA 61.394 66.667 4.71 4.71 0.00 5.36
310 311 4.168291 CCGCTCCTTCTCCTGGCC 62.168 72.222 0.00 0.00 0.00 5.36
311 312 4.168291 CCCGCTCCTTCTCCTGGC 62.168 72.222 0.00 0.00 0.00 4.85
312 313 3.474570 CCCCGCTCCTTCTCCTGG 61.475 72.222 0.00 0.00 0.00 4.45
313 314 4.168291 GCCCCGCTCCTTCTCCTG 62.168 72.222 0.00 0.00 0.00 3.86
314 315 4.722535 TGCCCCGCTCCTTCTCCT 62.723 66.667 0.00 0.00 0.00 3.69
315 316 4.168291 CTGCCCCGCTCCTTCTCC 62.168 72.222 0.00 0.00 0.00 3.71
316 317 4.847444 GCTGCCCCGCTCCTTCTC 62.847 72.222 0.00 0.00 0.00 2.87
339 340 3.760035 CAGTCCTCCCGGGTGACG 61.760 72.222 28.26 21.97 43.80 4.35
340 341 4.083862 GCAGTCCTCCCGGGTGAC 62.084 72.222 27.89 27.89 36.25 3.67
341 342 4.316823 AGCAGTCCTCCCGGGTGA 62.317 66.667 24.22 17.11 36.25 4.02
342 343 4.087892 CAGCAGTCCTCCCGGGTG 62.088 72.222 22.86 19.18 36.25 4.61
345 346 3.465403 CTCCAGCAGTCCTCCCGG 61.465 72.222 0.00 0.00 0.00 5.73
346 347 3.465403 CCTCCAGCAGTCCTCCCG 61.465 72.222 0.00 0.00 0.00 5.14
347 348 3.791586 GCCTCCAGCAGTCCTCCC 61.792 72.222 0.00 0.00 42.97 4.30
356 357 2.586792 CCACTACCTGCCTCCAGC 59.413 66.667 0.00 0.00 44.14 4.85
357 358 1.306141 TCCCACTACCTGCCTCCAG 60.306 63.158 0.00 0.00 38.85 3.86
358 359 1.306141 CTCCCACTACCTGCCTCCA 60.306 63.158 0.00 0.00 0.00 3.86
359 360 0.399233 ATCTCCCACTACCTGCCTCC 60.399 60.000 0.00 0.00 0.00 4.30
360 361 0.755686 CATCTCCCACTACCTGCCTC 59.244 60.000 0.00 0.00 0.00 4.70
361 362 0.692419 CCATCTCCCACTACCTGCCT 60.692 60.000 0.00 0.00 0.00 4.75
362 363 1.700042 CCCATCTCCCACTACCTGCC 61.700 65.000 0.00 0.00 0.00 4.85
363 364 1.832912 CCCATCTCCCACTACCTGC 59.167 63.158 0.00 0.00 0.00 4.85
364 365 1.832912 GCCCATCTCCCACTACCTG 59.167 63.158 0.00 0.00 0.00 4.00
365 366 1.762460 CGCCCATCTCCCACTACCT 60.762 63.158 0.00 0.00 0.00 3.08
366 367 1.335132 TTCGCCCATCTCCCACTACC 61.335 60.000 0.00 0.00 0.00 3.18
367 368 0.759346 ATTCGCCCATCTCCCACTAC 59.241 55.000 0.00 0.00 0.00 2.73
368 369 0.758734 CATTCGCCCATCTCCCACTA 59.241 55.000 0.00 0.00 0.00 2.74
369 370 1.528824 CATTCGCCCATCTCCCACT 59.471 57.895 0.00 0.00 0.00 4.00
370 371 1.526917 CCATTCGCCCATCTCCCAC 60.527 63.158 0.00 0.00 0.00 4.61
371 372 1.061905 ATCCATTCGCCCATCTCCCA 61.062 55.000 0.00 0.00 0.00 4.37
372 373 0.984230 TATCCATTCGCCCATCTCCC 59.016 55.000 0.00 0.00 0.00 4.30
373 374 2.303022 TCTTATCCATTCGCCCATCTCC 59.697 50.000 0.00 0.00 0.00 3.71
374 375 3.330267 GTCTTATCCATTCGCCCATCTC 58.670 50.000 0.00 0.00 0.00 2.75
375 376 2.289072 CGTCTTATCCATTCGCCCATCT 60.289 50.000 0.00 0.00 0.00 2.90
376 377 2.069273 CGTCTTATCCATTCGCCCATC 58.931 52.381 0.00 0.00 0.00 3.51
377 378 1.878102 GCGTCTTATCCATTCGCCCAT 60.878 52.381 0.00 0.00 40.83 4.00
378 379 0.531974 GCGTCTTATCCATTCGCCCA 60.532 55.000 0.00 0.00 40.83 5.36
379 380 1.557443 CGCGTCTTATCCATTCGCCC 61.557 60.000 0.00 0.00 43.18 6.13
380 381 1.853319 CGCGTCTTATCCATTCGCC 59.147 57.895 0.00 0.00 43.18 5.54
381 382 1.201825 GCGCGTCTTATCCATTCGC 59.798 57.895 8.43 0.00 42.78 4.70
382 383 1.482955 CGCGCGTCTTATCCATTCG 59.517 57.895 24.19 0.00 0.00 3.34
383 384 1.201825 GCGCGCGTCTTATCCATTC 59.798 57.895 32.35 5.70 0.00 2.67
384 385 1.520564 TGCGCGCGTCTTATCCATT 60.521 52.632 32.35 0.00 0.00 3.16
385 386 2.106131 TGCGCGCGTCTTATCCAT 59.894 55.556 32.35 0.00 0.00 3.41
386 387 2.829043 AAGTGCGCGCGTCTTATCCA 62.829 55.000 32.35 15.96 0.00 3.41
387 388 1.693083 AAAGTGCGCGCGTCTTATCC 61.693 55.000 30.67 13.22 0.00 2.59
388 389 0.094730 AAAAGTGCGCGCGTCTTATC 59.905 50.000 30.67 14.02 0.00 1.75
389 390 0.515564 AAAAAGTGCGCGCGTCTTAT 59.484 45.000 30.67 22.72 0.00 1.73
390 391 1.125384 CTAAAAAGTGCGCGCGTCTTA 59.875 47.619 30.67 20.22 0.00 2.10
391 392 0.110823 CTAAAAAGTGCGCGCGTCTT 60.111 50.000 32.35 29.03 0.00 3.01
392 393 0.942410 TCTAAAAAGTGCGCGCGTCT 60.942 50.000 32.35 25.31 0.00 4.18
393 394 0.094730 ATCTAAAAAGTGCGCGCGTC 59.905 50.000 32.35 23.18 0.00 5.19
394 395 0.515564 AATCTAAAAAGTGCGCGCGT 59.484 45.000 32.35 13.99 0.00 6.01
395 396 1.602191 AAATCTAAAAAGTGCGCGCG 58.398 45.000 28.44 28.44 0.00 6.86
396 397 3.542310 CCTAAAATCTAAAAAGTGCGCGC 59.458 43.478 27.26 27.26 0.00 6.86
397 398 4.965062 TCCTAAAATCTAAAAAGTGCGCG 58.035 39.130 0.00 0.00 0.00 6.86
398 399 8.905103 TTTATCCTAAAATCTAAAAAGTGCGC 57.095 30.769 0.00 0.00 0.00 6.09
443 444 4.650588 CCCCAAAGCCTATTTCATCATGAA 59.349 41.667 0.00 0.00 34.03 2.57
444 445 4.217510 CCCCAAAGCCTATTTCATCATGA 58.782 43.478 0.00 0.00 0.00 3.07
445 446 3.962718 ACCCCAAAGCCTATTTCATCATG 59.037 43.478 0.00 0.00 0.00 3.07
446 447 3.962718 CACCCCAAAGCCTATTTCATCAT 59.037 43.478 0.00 0.00 0.00 2.45
447 448 3.011144 TCACCCCAAAGCCTATTTCATCA 59.989 43.478 0.00 0.00 0.00 3.07
448 449 3.631250 TCACCCCAAAGCCTATTTCATC 58.369 45.455 0.00 0.00 0.00 2.92
449 450 3.269381 TCTCACCCCAAAGCCTATTTCAT 59.731 43.478 0.00 0.00 0.00 2.57
450 451 2.647299 TCTCACCCCAAAGCCTATTTCA 59.353 45.455 0.00 0.00 0.00 2.69
451 452 3.366052 TCTCACCCCAAAGCCTATTTC 57.634 47.619 0.00 0.00 0.00 2.17
452 453 3.635591 CATCTCACCCCAAAGCCTATTT 58.364 45.455 0.00 0.00 0.00 1.40
453 454 2.687914 GCATCTCACCCCAAAGCCTATT 60.688 50.000 0.00 0.00 0.00 1.73
454 455 1.133668 GCATCTCACCCCAAAGCCTAT 60.134 52.381 0.00 0.00 0.00 2.57
455 456 0.255890 GCATCTCACCCCAAAGCCTA 59.744 55.000 0.00 0.00 0.00 3.93
456 457 1.000396 GCATCTCACCCCAAAGCCT 60.000 57.895 0.00 0.00 0.00 4.58
457 458 0.685458 ATGCATCTCACCCCAAAGCC 60.685 55.000 0.00 0.00 0.00 4.35
458 459 2.057137 TATGCATCTCACCCCAAAGC 57.943 50.000 0.19 0.00 0.00 3.51
459 460 5.404466 TTTTTATGCATCTCACCCCAAAG 57.596 39.130 0.19 0.00 0.00 2.77
490 491 9.143155 TGCACTATTCTCTATACAAGTCCATAA 57.857 33.333 0.00 0.00 0.00 1.90
491 492 8.706322 TGCACTATTCTCTATACAAGTCCATA 57.294 34.615 0.00 0.00 0.00 2.74
492 493 7.603180 TGCACTATTCTCTATACAAGTCCAT 57.397 36.000 0.00 0.00 0.00 3.41
493 494 7.069950 ACATGCACTATTCTCTATACAAGTCCA 59.930 37.037 0.00 0.00 0.00 4.02
494 495 7.437748 ACATGCACTATTCTCTATACAAGTCC 58.562 38.462 0.00 0.00 0.00 3.85
495 496 9.400638 GTACATGCACTATTCTCTATACAAGTC 57.599 37.037 0.00 0.00 0.00 3.01
496 497 9.137459 AGTACATGCACTATTCTCTATACAAGT 57.863 33.333 0.00 0.00 0.00 3.16
539 540 5.596845 GTTTTGATGGGAGCTACACAAAAA 58.403 37.500 21.00 14.34 38.37 1.94
540 541 4.261405 CGTTTTGATGGGAGCTACACAAAA 60.261 41.667 17.70 17.70 34.70 2.44
541 542 3.252215 CGTTTTGATGGGAGCTACACAAA 59.748 43.478 0.00 4.71 34.70 2.83
542 543 2.811431 CGTTTTGATGGGAGCTACACAA 59.189 45.455 0.00 0.00 34.70 3.33
543 544 2.224426 ACGTTTTGATGGGAGCTACACA 60.224 45.455 0.00 0.00 35.88 3.72
544 545 2.423577 ACGTTTTGATGGGAGCTACAC 58.576 47.619 0.00 0.00 0.00 2.90
545 546 2.851263 ACGTTTTGATGGGAGCTACA 57.149 45.000 0.00 0.00 0.00 2.74
546 547 5.353123 TGAAATACGTTTTGATGGGAGCTAC 59.647 40.000 0.00 0.00 0.00 3.58
547 548 5.492895 TGAAATACGTTTTGATGGGAGCTA 58.507 37.500 0.00 0.00 0.00 3.32
548 549 4.331968 TGAAATACGTTTTGATGGGAGCT 58.668 39.130 0.00 0.00 0.00 4.09
549 550 4.695217 TGAAATACGTTTTGATGGGAGC 57.305 40.909 0.00 0.00 0.00 4.70
550 551 6.435430 TGATGAAATACGTTTTGATGGGAG 57.565 37.500 0.00 0.00 0.00 4.30
551 552 6.601217 TCATGATGAAATACGTTTTGATGGGA 59.399 34.615 0.00 0.00 0.00 4.37
552 553 6.794374 TCATGATGAAATACGTTTTGATGGG 58.206 36.000 0.00 0.00 0.00 4.00
553 554 8.686397 TTTCATGATGAAATACGTTTTGATGG 57.314 30.769 16.04 0.00 41.02 3.51
577 578 9.462606 CCTTAGGGACTACATCTTTGTATTTTT 57.537 33.333 0.00 0.00 42.67 1.94
578 579 8.612145 ACCTTAGGGACTACATCTTTGTATTTT 58.388 33.333 2.32 0.00 42.67 1.82
579 580 8.159229 ACCTTAGGGACTACATCTTTGTATTT 57.841 34.615 2.32 0.00 42.67 1.40
580 581 7.750947 ACCTTAGGGACTACATCTTTGTATT 57.249 36.000 2.32 0.00 42.67 1.89
581 582 7.402071 TGAACCTTAGGGACTACATCTTTGTAT 59.598 37.037 2.32 0.00 42.67 2.29
582 583 6.727231 TGAACCTTAGGGACTACATCTTTGTA 59.273 38.462 2.32 0.00 42.67 2.41
583 584 5.546499 TGAACCTTAGGGACTACATCTTTGT 59.454 40.000 2.32 0.00 42.67 2.83
584 585 6.049955 TGAACCTTAGGGACTACATCTTTG 57.950 41.667 2.32 0.00 42.67 2.77
585 586 6.215636 ACATGAACCTTAGGGACTACATCTTT 59.784 38.462 2.32 0.00 42.67 2.52
586 587 5.726793 ACATGAACCTTAGGGACTACATCTT 59.273 40.000 2.32 0.00 42.67 2.40
587 588 5.129485 CACATGAACCTTAGGGACTACATCT 59.871 44.000 2.32 0.00 42.67 2.90
588 589 5.104900 ACACATGAACCTTAGGGACTACATC 60.105 44.000 2.32 0.00 42.67 3.06
589 590 4.783227 ACACATGAACCTTAGGGACTACAT 59.217 41.667 2.32 0.00 42.67 2.29
590 591 4.164981 ACACATGAACCTTAGGGACTACA 58.835 43.478 2.32 0.00 42.67 2.74
591 592 4.820894 ACACATGAACCTTAGGGACTAC 57.179 45.455 2.32 0.00 42.67 2.73
592 593 6.901300 AGAATACACATGAACCTTAGGGACTA 59.099 38.462 2.32 0.00 41.75 2.59
593 594 5.726793 AGAATACACATGAACCTTAGGGACT 59.273 40.000 2.32 0.00 46.37 3.85
594 595 5.990668 AGAATACACATGAACCTTAGGGAC 58.009 41.667 2.32 0.00 36.25 4.46
595 596 5.964477 AGAGAATACACATGAACCTTAGGGA 59.036 40.000 2.32 0.00 36.25 4.20
596 597 6.127054 TGAGAGAATACACATGAACCTTAGGG 60.127 42.308 2.32 0.00 38.88 3.53
597 598 6.878317 TGAGAGAATACACATGAACCTTAGG 58.122 40.000 0.00 0.00 0.00 2.69
600 601 9.911788 AAATATGAGAGAATACACATGAACCTT 57.088 29.630 0.00 0.00 0.00 3.50
601 602 9.911788 AAAATATGAGAGAATACACATGAACCT 57.088 29.630 0.00 0.00 0.00 3.50
659 660 9.988815 GAGCTACATGGATATCTCTTCTTAAAA 57.011 33.333 2.05 0.00 0.00 1.52
660 661 8.300286 CGAGCTACATGGATATCTCTTCTTAAA 58.700 37.037 2.05 0.00 0.00 1.52
661 662 7.665974 TCGAGCTACATGGATATCTCTTCTTAA 59.334 37.037 2.05 0.00 0.00 1.85
662 663 7.168905 TCGAGCTACATGGATATCTCTTCTTA 58.831 38.462 2.05 0.00 0.00 2.10
663 664 6.007076 TCGAGCTACATGGATATCTCTTCTT 58.993 40.000 2.05 0.00 0.00 2.52
664 665 5.565509 TCGAGCTACATGGATATCTCTTCT 58.434 41.667 2.05 0.00 0.00 2.85
665 666 5.676079 GCTCGAGCTACATGGATATCTCTTC 60.676 48.000 29.88 0.00 38.21 2.87
666 667 4.157656 GCTCGAGCTACATGGATATCTCTT 59.842 45.833 29.88 0.00 38.21 2.85
667 668 3.694072 GCTCGAGCTACATGGATATCTCT 59.306 47.826 29.88 0.00 38.21 3.10
668 669 3.441922 TGCTCGAGCTACATGGATATCTC 59.558 47.826 35.27 3.86 42.66 2.75
669 670 3.425659 TGCTCGAGCTACATGGATATCT 58.574 45.455 35.27 0.00 42.66 1.98
670 671 3.192422 ACTGCTCGAGCTACATGGATATC 59.808 47.826 35.27 4.97 42.66 1.63
671 672 3.161067 ACTGCTCGAGCTACATGGATAT 58.839 45.455 35.27 8.04 42.66 1.63
672 673 2.587522 ACTGCTCGAGCTACATGGATA 58.412 47.619 35.27 13.14 42.66 2.59
673 674 1.407936 ACTGCTCGAGCTACATGGAT 58.592 50.000 35.27 11.02 42.66 3.41
674 675 2.052782 TACTGCTCGAGCTACATGGA 57.947 50.000 35.27 14.62 42.66 3.41
675 676 2.159240 TGTTACTGCTCGAGCTACATGG 60.159 50.000 35.27 20.01 42.66 3.66
676 677 3.111838 CTGTTACTGCTCGAGCTACATG 58.888 50.000 35.27 21.64 42.66 3.21
677 678 2.755655 ACTGTTACTGCTCGAGCTACAT 59.244 45.455 35.27 20.64 42.66 2.29
678 679 2.160205 ACTGTTACTGCTCGAGCTACA 58.840 47.619 35.27 28.19 42.66 2.74
679 680 2.161808 TGACTGTTACTGCTCGAGCTAC 59.838 50.000 35.27 25.73 42.66 3.58
680 681 2.433436 TGACTGTTACTGCTCGAGCTA 58.567 47.619 35.27 19.54 42.66 3.32
681 682 1.248486 TGACTGTTACTGCTCGAGCT 58.752 50.000 35.27 20.62 42.66 4.09
682 683 2.285827 ATGACTGTTACTGCTCGAGC 57.714 50.000 30.42 30.42 42.50 5.03
683 684 4.201532 CGAAAATGACTGTTACTGCTCGAG 60.202 45.833 8.45 8.45 0.00 4.04
684 685 3.673338 CGAAAATGACTGTTACTGCTCGA 59.327 43.478 0.00 0.00 0.00 4.04
685 686 3.673338 TCGAAAATGACTGTTACTGCTCG 59.327 43.478 0.00 0.00 0.00 5.03
686 687 4.947420 GTCGAAAATGACTGTTACTGCTC 58.053 43.478 0.00 0.00 35.95 4.26
687 688 4.992381 GTCGAAAATGACTGTTACTGCT 57.008 40.909 0.00 0.00 35.95 4.24
704 705 9.090692 GCAAGTAAAATAAGGTATGTAAGTCGA 57.909 33.333 0.00 0.00 0.00 4.20
705 706 9.095065 AGCAAGTAAAATAAGGTATGTAAGTCG 57.905 33.333 0.00 0.00 0.00 4.18
711 712 9.331282 GATGAGAGCAAGTAAAATAAGGTATGT 57.669 33.333 0.00 0.00 0.00 2.29
712 713 8.491152 CGATGAGAGCAAGTAAAATAAGGTATG 58.509 37.037 0.00 0.00 0.00 2.39
713 714 8.421784 TCGATGAGAGCAAGTAAAATAAGGTAT 58.578 33.333 0.00 0.00 0.00 2.73
714 715 7.778083 TCGATGAGAGCAAGTAAAATAAGGTA 58.222 34.615 0.00 0.00 0.00 3.08
732 733 5.289675 GTCCACTGTTAATTCACTCGATGAG 59.710 44.000 0.00 0.00 38.99 2.90
738 739 5.227908 TCGAAGTCCACTGTTAATTCACTC 58.772 41.667 0.00 0.00 0.00 3.51
749 750 7.526608 TGCTTTATTTATTTCGAAGTCCACTG 58.473 34.615 0.00 0.00 0.00 3.66
787 789 4.974645 TGGGCCCATCAATTAGTAGTAG 57.025 45.455 24.45 0.00 0.00 2.57
791 793 3.435026 GCTCTTGGGCCCATCAATTAGTA 60.435 47.826 29.23 5.98 0.00 1.82
792 794 2.687914 GCTCTTGGGCCCATCAATTAGT 60.688 50.000 29.23 0.00 0.00 2.24
793 795 1.959282 GCTCTTGGGCCCATCAATTAG 59.041 52.381 29.23 19.47 0.00 1.73
794 796 1.287442 TGCTCTTGGGCCCATCAATTA 59.713 47.619 29.23 8.68 0.00 1.40
853 858 1.673337 GTAGGGTTTGGTCGGTGGC 60.673 63.158 0.00 0.00 0.00 5.01
888 893 2.434185 TGAGTGAATGGCGGCGAC 60.434 61.111 12.98 9.31 0.00 5.19
898 903 2.609491 GCGAGGTGTGTATGTGAGTGAA 60.609 50.000 0.00 0.00 0.00 3.18
902 907 1.469940 GGAGCGAGGTGTGTATGTGAG 60.470 57.143 0.00 0.00 0.00 3.51
908 913 0.251209 AGTGAGGAGCGAGGTGTGTA 60.251 55.000 0.00 0.00 0.00 2.90
909 914 1.528292 GAGTGAGGAGCGAGGTGTGT 61.528 60.000 0.00 0.00 0.00 3.72
910 915 1.214062 GAGTGAGGAGCGAGGTGTG 59.786 63.158 0.00 0.00 0.00 3.82
994 1011 2.509336 CTCCGCGTCCATGGTCAC 60.509 66.667 12.58 2.13 0.00 3.67
995 1012 4.451150 GCTCCGCGTCCATGGTCA 62.451 66.667 12.58 0.00 0.00 4.02
997 1014 4.457496 CTGCTCCGCGTCCATGGT 62.457 66.667 12.58 0.00 0.00 3.55
1162 2153 2.047274 CGCGGCTTCCTTGAAGGA 60.047 61.111 10.46 10.46 44.10 3.36
1479 2491 4.393155 ATGCGGAAGAGCGTGCCA 62.393 61.111 0.00 0.00 40.67 4.92
1751 2766 1.647545 GGTATCCACCACGACGACGA 61.648 60.000 15.32 0.00 45.04 4.20
1839 2861 1.563111 CATTGCCAATGTTGATCGCC 58.437 50.000 9.30 0.00 34.18 5.54
1873 2895 1.067582 GCTCCAGGTACCCGAATCG 59.932 63.158 8.74 0.00 0.00 3.34
1874 2896 1.335132 TGGCTCCAGGTACCCGAATC 61.335 60.000 8.74 0.70 0.00 2.52
1951 2983 5.747951 TTGCCAATTGAACAAATGGAAAC 57.252 34.783 21.25 7.88 42.55 2.78
2075 3136 1.411394 CAAAACGCACATTCAGGCTG 58.589 50.000 8.58 8.58 0.00 4.85
2245 3311 3.248602 GCATATTTCAAGGACGGCACTAG 59.751 47.826 0.00 0.00 0.00 2.57
2246 3312 3.118408 AGCATATTTCAAGGACGGCACTA 60.118 43.478 0.00 0.00 0.00 2.74
2249 3315 2.418368 AGCATATTTCAAGGACGGCA 57.582 45.000 0.00 0.00 0.00 5.69
2259 3325 6.863645 TGTCTCGCTACAAGATAGCATATTTC 59.136 38.462 6.73 0.00 40.39 2.17
2265 3331 3.304057 CGATGTCTCGCTACAAGATAGCA 60.304 47.826 6.73 0.00 40.39 3.49
2287 3390 9.807649 AATGTCTTGCTAAATAAATCAATGGAC 57.192 29.630 0.00 0.00 0.00 4.02
2306 3409 6.558909 GCTAAAGCATTCTAAGCAATGTCTT 58.441 36.000 0.00 0.00 41.59 3.01
2441 3545 3.749609 TCATCACATCTTTCACACTGCAG 59.250 43.478 13.48 13.48 0.00 4.41
2491 3598 2.043953 GGGCCAACCTCATCCCAC 60.044 66.667 4.39 0.00 38.62 4.61
2509 3616 4.629251 TGCGCAACATAATGCTCAAATA 57.371 36.364 8.16 0.00 44.21 1.40
2512 3619 2.539344 CGATGCGCAACATAATGCTCAA 60.539 45.455 17.11 0.00 43.46 3.02
2580 3688 4.887748 TCTGCAGGAAGTACTTGAGAAAG 58.112 43.478 14.14 5.45 0.00 2.62
2620 3728 3.044059 GAACACCGCATGCCTCAGC 62.044 63.158 13.15 0.00 40.48 4.26
2621 3729 1.028330 ATGAACACCGCATGCCTCAG 61.028 55.000 13.15 2.18 29.45 3.35
2622 3730 1.002257 ATGAACACCGCATGCCTCA 60.002 52.632 13.15 7.74 0.00 3.86
2623 3731 0.745845 AGATGAACACCGCATGCCTC 60.746 55.000 13.15 1.92 0.00 4.70
2624 3732 0.322816 AAGATGAACACCGCATGCCT 60.323 50.000 13.15 0.00 0.00 4.75
2686 3794 1.048601 TCAGATTCCCCGCTATGGAC 58.951 55.000 0.00 0.00 42.00 4.02
2715 3823 1.490910 AGCCTTTAGTACTGCCCCATC 59.509 52.381 5.39 0.00 0.00 3.51
2733 3841 1.358046 GCTTGGATGATTCCGCAGC 59.642 57.895 1.54 1.54 45.89 5.25
2752 3977 2.028385 ACTCCACTCCAACGGACATTAC 60.028 50.000 0.00 0.00 0.00 1.89
2759 3984 1.004918 GACCACTCCACTCCAACGG 60.005 63.158 0.00 0.00 0.00 4.44
2761 3986 0.759346 ACTGACCACTCCACTCCAAC 59.241 55.000 0.00 0.00 0.00 3.77
2763 3988 0.398522 ACACTGACCACTCCACTCCA 60.399 55.000 0.00 0.00 0.00 3.86
2764 3989 0.759346 AACACTGACCACTCCACTCC 59.241 55.000 0.00 0.00 0.00 3.85
2765 3990 1.689273 AGAACACTGACCACTCCACTC 59.311 52.381 0.00 0.00 0.00 3.51
2766 3991 1.794714 AGAACACTGACCACTCCACT 58.205 50.000 0.00 0.00 0.00 4.00
2767 3992 2.622064 AAGAACACTGACCACTCCAC 57.378 50.000 0.00 0.00 0.00 4.02
2768 3993 3.278574 CAAAAGAACACTGACCACTCCA 58.721 45.455 0.00 0.00 0.00 3.86
2783 4008 5.333798 GCTTGTAGTACGATGTTGCAAAAGA 60.334 40.000 0.00 0.00 0.00 2.52
2797 4022 3.061697 CCCAAAACGATCGCTTGTAGTAC 59.938 47.826 16.60 0.00 0.00 2.73
2798 4023 3.255725 CCCAAAACGATCGCTTGTAGTA 58.744 45.455 16.60 0.00 0.00 1.82
2799 4024 2.073816 CCCAAAACGATCGCTTGTAGT 58.926 47.619 16.60 0.00 0.00 2.73
2813 4038 1.859302 ACCAAGAACACTGCCCAAAA 58.141 45.000 0.00 0.00 0.00 2.44
2819 4044 2.494059 TGCTAGAACCAAGAACACTGC 58.506 47.619 0.00 0.00 0.00 4.40
2820 4045 4.318332 TCATGCTAGAACCAAGAACACTG 58.682 43.478 0.00 0.00 0.00 3.66
2821 4046 4.623932 TCATGCTAGAACCAAGAACACT 57.376 40.909 0.00 0.00 0.00 3.55
2869 4114 3.609853 GAATGGTCCATGAACAGTAGCA 58.390 45.455 4.74 0.00 30.70 3.49
2909 4157 8.430801 AGCAGCATTATCTACTTAAACAGAAG 57.569 34.615 0.00 0.00 0.00 2.85
2968 4217 1.831580 ATCTGGTTTTCTCAGGCAGC 58.168 50.000 0.00 0.00 33.36 5.25
2969 4218 3.152341 ACAATCTGGTTTTCTCAGGCAG 58.848 45.455 0.00 0.00 33.36 4.85
2977 4226 7.433680 ACATCCAGTTTTACAATCTGGTTTTC 58.566 34.615 11.62 0.00 46.04 2.29
2983 4232 9.357652 CCAAATAACATCCAGTTTTACAATCTG 57.642 33.333 0.00 0.00 41.64 2.90
3004 4257 4.835056 ACTTAAGCCAAAGAGAAGCCAAAT 59.165 37.500 1.29 0.00 0.00 2.32
3026 4342 3.262405 TCAAACCATCCCCACTACACTAC 59.738 47.826 0.00 0.00 0.00 2.73
3027 4343 3.522759 TCAAACCATCCCCACTACACTA 58.477 45.455 0.00 0.00 0.00 2.74
3028 4344 2.344592 TCAAACCATCCCCACTACACT 58.655 47.619 0.00 0.00 0.00 3.55
3029 4345 2.871096 TCAAACCATCCCCACTACAC 57.129 50.000 0.00 0.00 0.00 2.90
3030 4346 4.367166 TCTATCAAACCATCCCCACTACA 58.633 43.478 0.00 0.00 0.00 2.74
3079 4395 5.564848 CGAGTGGAGTAGACAACAAGATTCA 60.565 44.000 0.00 0.00 0.00 2.57
3097 4413 2.100916 CAGGGTCTAACCATACGAGTGG 59.899 54.545 8.87 8.87 41.02 4.00
3098 4414 2.758979 ACAGGGTCTAACCATACGAGTG 59.241 50.000 0.00 0.00 41.02 3.51
3099 4415 3.097342 ACAGGGTCTAACCATACGAGT 57.903 47.619 0.00 0.00 41.02 4.18
3100 4416 3.949754 TGTACAGGGTCTAACCATACGAG 59.050 47.826 0.00 0.00 41.02 4.18
3101 4417 3.966979 TGTACAGGGTCTAACCATACGA 58.033 45.455 0.00 0.00 41.02 3.43
3102 4418 4.724074 TTGTACAGGGTCTAACCATACG 57.276 45.455 0.00 0.00 41.02 3.06
3103 4419 4.814771 GCATTGTACAGGGTCTAACCATAC 59.185 45.833 0.00 0.00 41.02 2.39
3104 4420 4.471747 TGCATTGTACAGGGTCTAACCATA 59.528 41.667 0.00 0.00 41.02 2.74
3105 4421 3.265737 TGCATTGTACAGGGTCTAACCAT 59.734 43.478 0.00 0.00 41.02 3.55
3106 4422 2.640332 TGCATTGTACAGGGTCTAACCA 59.360 45.455 0.00 0.00 41.02 3.67
3113 4429 2.220653 AGCATTGCATTGTACAGGGT 57.779 45.000 11.91 0.00 0.00 4.34
3383 4699 1.533756 CCACAGGCGGCGATTTTTATG 60.534 52.381 12.98 0.00 0.00 1.90
3384 4700 0.738389 CCACAGGCGGCGATTTTTAT 59.262 50.000 12.98 0.00 0.00 1.40
3385 4701 1.309499 CCCACAGGCGGCGATTTTTA 61.309 55.000 12.98 0.00 0.00 1.52
3386 4702 2.635443 CCCACAGGCGGCGATTTTT 61.635 57.895 12.98 0.00 0.00 1.94
3387 4703 3.061848 CCCACAGGCGGCGATTTT 61.062 61.111 12.98 0.00 0.00 1.82
3410 4726 4.536687 GAGCCGATTTTGCCGCCG 62.537 66.667 0.00 0.00 0.00 6.46
3411 4727 4.536687 CGAGCCGATTTTGCCGCC 62.537 66.667 0.00 0.00 0.00 6.13
3412 4728 4.536687 CCGAGCCGATTTTGCCGC 62.537 66.667 0.00 0.00 0.00 6.53
3413 4729 3.876198 CCCGAGCCGATTTTGCCG 61.876 66.667 0.00 0.00 0.00 5.69
3414 4730 3.518068 CCCCGAGCCGATTTTGCC 61.518 66.667 0.00 0.00 0.00 4.52
3415 4731 3.518068 CCCCCGAGCCGATTTTGC 61.518 66.667 0.00 0.00 0.00 3.68
3416 4732 3.518068 GCCCCCGAGCCGATTTTG 61.518 66.667 0.00 0.00 0.00 2.44
3435 4751 2.985847 GACAGCTGGGTGCCCAAC 60.986 66.667 19.93 6.99 46.63 3.77
3436 4752 4.641645 CGACAGCTGGGTGCCCAA 62.642 66.667 19.93 0.00 46.63 4.12
3454 4770 2.362889 AAAATCGCTGCCTGGGGG 60.363 61.111 0.00 0.00 0.00 5.40
3455 4771 2.713967 CCAAAATCGCTGCCTGGGG 61.714 63.158 0.00 0.00 0.00 4.96
3456 4772 2.887360 CCAAAATCGCTGCCTGGG 59.113 61.111 0.00 0.00 0.00 4.45
3457 4773 2.182537 GCCAAAATCGCTGCCTGG 59.817 61.111 0.00 0.00 0.00 4.45
3458 4774 2.182537 GGCCAAAATCGCTGCCTG 59.817 61.111 0.00 0.00 40.77 4.85
3459 4775 3.070576 GGGCCAAAATCGCTGCCT 61.071 61.111 4.39 0.00 43.50 4.75
3460 4776 2.242797 AATGGGCCAAAATCGCTGCC 62.243 55.000 11.89 0.00 43.26 4.85
3461 4777 0.459489 TAATGGGCCAAAATCGCTGC 59.541 50.000 11.89 0.00 0.00 5.25
3462 4778 3.383761 GAATAATGGGCCAAAATCGCTG 58.616 45.455 11.89 0.00 0.00 5.18
3463 4779 2.034558 CGAATAATGGGCCAAAATCGCT 59.965 45.455 11.89 0.00 0.00 4.93
3464 4780 2.393764 CGAATAATGGGCCAAAATCGC 58.606 47.619 11.89 2.56 0.00 4.58
3465 4781 2.862140 GCCGAATAATGGGCCAAAATCG 60.862 50.000 11.89 17.76 44.10 3.34
3466 4782 2.754472 GCCGAATAATGGGCCAAAATC 58.246 47.619 11.89 6.10 44.10 2.17
3467 4783 2.908688 GCCGAATAATGGGCCAAAAT 57.091 45.000 11.89 3.86 44.10 1.82
3474 4790 1.681264 GAAAGTGGGCCGAATAATGGG 59.319 52.381 0.00 0.00 0.00 4.00
3475 4791 1.333619 CGAAAGTGGGCCGAATAATGG 59.666 52.381 0.00 0.00 0.00 3.16
3476 4792 2.014128 ACGAAAGTGGGCCGAATAATG 58.986 47.619 0.00 0.00 46.97 1.90
3477 4793 2.413310 ACGAAAGTGGGCCGAATAAT 57.587 45.000 0.00 0.00 46.97 1.28
3478 4794 3.940229 ACGAAAGTGGGCCGAATAA 57.060 47.368 0.00 0.00 46.97 1.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.