Multiple sequence alignment - TraesCS7B01G311600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G311600 chr7B 100.000 5147 0 0 1 5147 557056439 557061585 0.000000e+00 9505.0
1 TraesCS7B01G311600 chr7B 93.651 63 1 3 5029 5089 442536067 442536128 1.970000e-14 91.6
2 TraesCS7B01G311600 chr7B 93.878 49 3 0 5038 5086 625972460 625972508 1.990000e-09 75.0
3 TraesCS7B01G311600 chr7D 91.871 2940 183 30 1833 4743 523046366 523049278 0.000000e+00 4054.0
4 TraesCS7B01G311600 chr7D 92.465 1128 54 14 681 1785 523045242 523046361 0.000000e+00 1583.0
5 TraesCS7B01G311600 chr7D 84.584 493 46 19 1 470 523044612 523045097 3.630000e-126 462.0
6 TraesCS7B01G311600 chr7A 92.872 1922 121 10 2399 4307 603293109 603295027 0.000000e+00 2776.0
7 TraesCS7B01G311600 chr7A 92.999 1057 54 12 742 1785 603291466 603292515 0.000000e+00 1524.0
8 TraesCS7B01G311600 chr7A 87.797 590 45 11 1833 2413 603292520 603293091 0.000000e+00 665.0
9 TraesCS7B01G311600 chr7A 86.916 428 41 11 4299 4721 603296365 603296782 2.810000e-127 466.0
10 TraesCS7B01G311600 chr7A 84.321 287 41 4 10 293 222927599 222927884 1.410000e-70 278.0
11 TraesCS7B01G311600 chr7A 82.943 299 47 4 1 296 198228095 198228392 3.060000e-67 267.0
12 TraesCS7B01G311600 chr7A 80.268 299 54 5 1 296 510144585 510144881 2.410000e-53 220.0
13 TraesCS7B01G311600 chr7A 80.268 299 52 6 2 296 519332644 519332939 8.680000e-53 219.0
14 TraesCS7B01G311600 chr7A 91.803 61 5 0 1770 1830 669633405 669633465 9.180000e-13 86.1
15 TraesCS7B01G311600 chr1D 85.955 356 34 6 1833 2177 264340670 264341020 2.930000e-97 366.0
16 TraesCS7B01G311600 chr1D 84.746 59 9 0 5028 5086 478176710 478176768 5.570000e-05 60.2
17 TraesCS7B01G311600 chr5D 85.154 357 37 7 1833 2177 87100137 87100489 8.200000e-93 351.0
18 TraesCS7B01G311600 chr5D 84.594 357 40 6 1833 2177 399570035 399570388 1.770000e-89 340.0
19 TraesCS7B01G311600 chr5D 84.594 357 40 6 1833 2177 551598009 551598362 1.770000e-89 340.0
20 TraesCS7B01G311600 chr5D 91.667 60 4 1 5030 5089 525465945 525466003 1.190000e-11 82.4
21 TraesCS7B01G311600 chr4D 85.154 357 38 6 1833 2177 255797197 255797550 8.200000e-93 351.0
22 TraesCS7B01G311600 chr4D 94.737 57 3 0 1774 1830 182067329 182067385 7.100000e-14 89.8
23 TraesCS7B01G311600 chr4D 94.737 57 3 0 1774 1830 270678539 270678595 7.100000e-14 89.8
24 TraesCS7B01G311600 chr3B 92.735 234 16 1 1842 2075 52422487 52422255 2.300000e-88 337.0
25 TraesCS7B01G311600 chr3B 98.148 54 1 0 1777 1830 15111017 15111070 1.530000e-15 95.3
26 TraesCS7B01G311600 chr3B 100.000 51 0 0 1780 1830 801129471 801129521 1.530000e-15 95.3
27 TraesCS7B01G311600 chr3B 85.714 63 7 2 5028 5089 637136150 637136089 1.200000e-06 65.8
28 TraesCS7B01G311600 chr1A 87.857 280 30 2 1840 2116 107934508 107934230 4.970000e-85 326.0
29 TraesCS7B01G311600 chr1A 85.405 185 24 3 1994 2177 308300983 308301165 6.800000e-44 189.0
30 TraesCS7B01G311600 chr1A 87.952 83 10 0 3515 3597 385661762 385661844 1.180000e-16 99.0
31 TraesCS7B01G311600 chr4A 83.051 354 45 6 1833 2176 560894762 560894414 1.800000e-79 307.0
32 TraesCS7B01G311600 chr4A 82.799 343 47 10 6 341 517418588 517418251 3.900000e-76 296.0
33 TraesCS7B01G311600 chr4A 81.197 351 56 7 2 346 516357554 516357208 1.830000e-69 274.0
34 TraesCS7B01G311600 chr4A 95.082 61 2 1 1775 1834 590257867 590257807 1.530000e-15 95.3
35 TraesCS7B01G311600 chr2B 85.401 274 32 6 1843 2116 725306401 725306666 1.410000e-70 278.0
36 TraesCS7B01G311600 chr2B 79.706 340 66 3 5 342 432550544 432550206 5.150000e-60 243.0
37 TraesCS7B01G311600 chr2B 92.188 64 3 2 1768 1830 453180985 453180923 7.100000e-14 89.8
38 TraesCS7B01G311600 chr2B 90.385 52 5 0 5038 5089 745779439 745779490 9.250000e-08 69.4
39 TraesCS7B01G311600 chr3D 80.588 340 61 5 2 337 176585013 176584675 1.840000e-64 257.0
40 TraesCS7B01G311600 chr6A 81.481 297 51 4 1 294 22677320 22677615 1.850000e-59 241.0
41 TraesCS7B01G311600 chr6A 95.455 44 1 1 2131 2173 148676045 148676088 9.250000e-08 69.4
42 TraesCS7B01G311600 chr2A 90.604 149 14 0 1936 2084 306139633 306139781 1.130000e-46 198.0
43 TraesCS7B01G311600 chr5B 79.276 304 39 13 1018 1314 658542614 658542900 1.890000e-44 191.0
44 TraesCS7B01G311600 chr5B 94.828 58 3 0 5030 5087 214142485 214142428 1.970000e-14 91.6
45 TraesCS7B01G311600 chr5B 94.545 55 3 0 1776 1830 331307497 331307443 9.180000e-13 86.1
46 TraesCS7B01G311600 chr3A 85.405 185 24 3 1994 2177 175939071 175938889 6.800000e-44 189.0
47 TraesCS7B01G311600 chr6B 88.312 154 18 0 1936 2089 547720960 547721113 8.800000e-43 185.0
48 TraesCS7B01G311600 chr6B 84.756 164 24 1 1927 2089 247030750 247030913 4.120000e-36 163.0
49 TraesCS7B01G311600 chr6B 85.366 164 16 6 1927 2089 266861188 266861344 4.120000e-36 163.0
50 TraesCS7B01G311600 chr2D 73.944 284 54 12 20 300 193291371 193291105 4.240000e-16 97.1
51 TraesCS7B01G311600 chr2D 90.909 66 3 3 1771 1834 49872818 49872882 9.180000e-13 86.1
52 TraesCS7B01G311600 chr2D 93.878 49 3 0 5041 5089 391849650 391849602 1.990000e-09 75.0
53 TraesCS7B01G311600 chr1B 89.091 55 5 1 5034 5088 401331968 401331915 3.330000e-07 67.6
54 TraesCS7B01G311600 chr1B 96.970 33 1 0 1163 1195 9261429 9261397 7.200000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G311600 chr7B 557056439 557061585 5146 False 9505.00 9505 100.000 1 5147 1 chr7B.!!$F2 5146
1 TraesCS7B01G311600 chr7D 523044612 523049278 4666 False 2033.00 4054 89.640 1 4743 3 chr7D.!!$F1 4742
2 TraesCS7B01G311600 chr7A 603291466 603296782 5316 False 1357.75 2776 90.146 742 4721 4 chr7A.!!$F6 3979

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
153 155 0.034896 AATGGATATCCGTCGGTGCC 59.965 55.0 17.01 9.06 39.43 5.01 F
326 330 0.816825 CTGAATGGCCGACTCCCATG 60.817 60.0 0.00 0.00 42.10 3.66 F
1849 1899 0.663153 GTTCCTGTTGCGCTTTGACT 59.337 50.0 9.73 0.00 0.00 3.41 F
1904 1954 0.747255 TCCATCAGAAGCTCGTAGCC 59.253 55.0 0.00 0.00 43.77 3.93 F
1905 1955 0.749649 CCATCAGAAGCTCGTAGCCT 59.250 55.0 0.00 0.00 43.77 4.58 F
3714 3821 0.606401 CCATTGACCACCTTGACGCT 60.606 55.0 0.00 0.00 0.00 5.07 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1829 1879 0.317854 GTCAAAGCGCAACAGGAACC 60.318 55.0 11.47 0.0 0.00 3.62 R
2085 2143 0.540923 AGCTGACAGGAAGCCATCTC 59.459 55.0 4.26 0.0 41.82 2.75 R
2978 3073 0.179134 CAATCACGTCCCGGAGTCTC 60.179 60.0 0.73 0.0 0.00 3.36 R
3699 3806 0.319211 CGTAAGCGTCAAGGTGGTCA 60.319 55.0 0.00 0.0 0.00 4.02 R
3903 4010 0.618458 ACATGAACGTGCCCTGGTAT 59.382 50.0 0.00 0.0 0.00 2.73 R
5087 6557 0.108615 CAGGAGTGGCAAGAGTACCG 60.109 60.0 0.00 0.0 0.00 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 4.399303 GCCCTTTGTGTTGAAGCATATACT 59.601 41.667 0.00 0.00 0.00 2.12
34 35 4.188462 TGTGTTGAAGCATATACTTCCGG 58.812 43.478 12.27 0.00 44.50 5.14
38 39 2.965831 TGAAGCATATACTTCCGGAGCT 59.034 45.455 12.27 5.10 44.50 4.09
39 40 3.005897 TGAAGCATATACTTCCGGAGCTC 59.994 47.826 11.99 4.71 44.50 4.09
40 41 2.598565 AGCATATACTTCCGGAGCTCA 58.401 47.619 17.19 0.00 0.00 4.26
41 42 2.297597 AGCATATACTTCCGGAGCTCAC 59.702 50.000 17.19 4.01 0.00 3.51
42 43 2.035961 GCATATACTTCCGGAGCTCACA 59.964 50.000 17.19 0.00 0.00 3.58
54 55 0.900182 AGCTCACACCAGTCCGATGA 60.900 55.000 0.00 0.00 0.00 2.92
77 78 2.124570 CTGCCGGACATGGGGAAG 60.125 66.667 5.05 0.00 0.00 3.46
92 93 1.169034 GGAAGGCAATGGAGATCCGC 61.169 60.000 0.00 0.00 39.43 5.54
94 95 1.070758 GAAGGCAATGGAGATCCGCTA 59.929 52.381 0.00 0.00 39.43 4.26
95 96 1.356124 AGGCAATGGAGATCCGCTAT 58.644 50.000 0.00 0.00 39.43 2.97
97 98 1.002430 GGCAATGGAGATCCGCTATGA 59.998 52.381 0.00 0.00 39.43 2.15
129 131 5.519808 AGACTAGTCAAGGGTATCATGTCA 58.480 41.667 24.44 0.00 0.00 3.58
142 144 6.354213 GGGTATCATGTCATGGGAATGGATAT 60.354 42.308 12.90 0.00 0.00 1.63
150 152 0.974383 GGGAATGGATATCCGTCGGT 59.026 55.000 17.01 1.42 37.87 4.69
153 155 0.034896 AATGGATATCCGTCGGTGCC 59.965 55.000 17.01 9.06 39.43 5.01
168 170 2.159282 CGGTGCCGACTGTAGACTAATT 60.159 50.000 4.35 0.00 42.83 1.40
250 254 8.178964 TGTTTAGTTTATATGAATTCCACGTGC 58.821 33.333 10.91 0.00 0.00 5.34
263 267 1.621107 CACGTGCTTGCATGGATTTC 58.379 50.000 17.60 0.00 0.00 2.17
287 291 5.584442 GTCCGTTTAGTTCAAACAATGGTT 58.416 37.500 1.32 0.00 45.80 3.67
288 292 5.457473 GTCCGTTTAGTTCAAACAATGGTTG 59.543 40.000 4.33 4.33 45.80 3.77
296 300 9.522804 TTAGTTCAAACAATGGTTGAAATGTAC 57.477 29.630 29.49 17.83 37.30 2.90
299 303 3.196007 ACAATGGTTGAAATGTACGCG 57.804 42.857 3.53 3.53 0.00 6.01
322 326 2.892425 CGCTGAATGGCCGACTCC 60.892 66.667 0.00 0.00 0.00 3.85
323 327 2.514824 GCTGAATGGCCGACTCCC 60.515 66.667 0.00 0.00 0.00 4.30
324 328 2.989639 CTGAATGGCCGACTCCCA 59.010 61.111 0.00 0.00 36.66 4.37
326 330 0.816825 CTGAATGGCCGACTCCCATG 60.817 60.000 0.00 0.00 42.10 3.66
330 353 4.530857 GGCCGACTCCCATGTCCG 62.531 72.222 0.00 0.00 33.70 4.79
336 359 1.535444 ACTCCCATGTCCGTGTCCA 60.535 57.895 0.00 0.00 0.00 4.02
349 372 2.499205 GTCCATGGACGGATGCGA 59.501 61.111 28.52 0.00 37.41 5.10
350 373 1.592669 GTCCATGGACGGATGCGAG 60.593 63.158 28.52 0.00 37.41 5.03
353 376 1.300465 CATGGACGGATGCGAGAGG 60.300 63.158 15.49 0.00 0.00 3.69
354 377 1.455773 ATGGACGGATGCGAGAGGA 60.456 57.895 15.49 0.00 0.00 3.71
360 383 2.009774 ACGGATGCGAGAGGAAATTTG 58.990 47.619 15.49 0.00 32.68 2.32
366 389 1.468914 GCGAGAGGAAATTTGTGGGTC 59.531 52.381 0.00 0.00 0.00 4.46
368 391 3.146066 CGAGAGGAAATTTGTGGGTCAA 58.854 45.455 0.00 0.00 0.00 3.18
380 403 1.069227 GTGGGTCAACGTTGAAGATGC 60.069 52.381 31.20 18.39 39.21 3.91
387 410 1.800805 ACGTTGAAGATGCAGGTCAG 58.199 50.000 0.00 0.00 0.00 3.51
390 413 1.728971 GTTGAAGATGCAGGTCAGACG 59.271 52.381 0.00 0.00 0.00 4.18
421 444 1.067364 TGTTCGACGGTTAACTGAGCA 59.933 47.619 21.29 11.19 0.00 4.26
470 493 6.589523 CGGAATATCAACCTGATTTTTGCAAA 59.410 34.615 8.05 8.05 38.26 3.68
471 494 7.278424 CGGAATATCAACCTGATTTTTGCAAAT 59.722 33.333 13.65 0.00 38.26 2.32
472 495 8.949177 GGAATATCAACCTGATTTTTGCAAATT 58.051 29.630 13.65 3.63 38.26 1.82
473 496 9.977762 GAATATCAACCTGATTTTTGCAAATTC 57.022 29.630 13.65 13.34 38.26 2.17
474 497 5.903764 TCAACCTGATTTTTGCAAATTCG 57.096 34.783 13.65 9.31 32.35 3.34
475 498 4.210955 TCAACCTGATTTTTGCAAATTCGC 59.789 37.500 13.65 3.98 32.35 4.70
476 499 3.726607 ACCTGATTTTTGCAAATTCGCA 58.273 36.364 13.65 8.30 41.03 5.10
477 500 8.853230 ATCAACCTGATTTTTGCAAATTCGCAA 61.853 33.333 13.65 0.00 41.20 4.85
516 539 7.387948 TGACTTTTGTAAGCTTCTATCCTTGAC 59.612 37.037 0.00 0.00 34.60 3.18
522 545 5.643421 AAGCTTCTATCCTTGACCATGAT 57.357 39.130 0.00 0.00 0.00 2.45
523 546 5.226194 AGCTTCTATCCTTGACCATGATC 57.774 43.478 0.00 0.00 0.00 2.92
527 550 1.511613 ATCCTTGACCATGATCCGGT 58.488 50.000 0.00 3.63 40.30 5.28
543 566 2.434336 TCCGGTTCTACAGCTTGCATAT 59.566 45.455 0.00 0.00 0.00 1.78
556 579 3.633525 GCTTGCATATGACCTTGGATTGA 59.366 43.478 6.97 0.00 0.00 2.57
557 580 4.261489 GCTTGCATATGACCTTGGATTGAG 60.261 45.833 6.97 0.00 0.00 3.02
562 585 5.048224 GCATATGACCTTGGATTGAGAATGG 60.048 44.000 6.97 0.00 0.00 3.16
573 596 5.221864 TGGATTGAGAATGGGAGATGATGAG 60.222 44.000 0.00 0.00 0.00 2.90
591 615 4.223320 TGAGAAGCAAAATTGTTCGTCC 57.777 40.909 0.00 0.00 0.00 4.79
615 639 6.415280 CCTAACGAGACTAATGACTTTCATCG 59.585 42.308 0.00 0.00 35.76 3.84
621 645 6.925211 AGACTAATGACTTTCATCGTTGAGA 58.075 36.000 0.00 0.00 35.76 3.27
648 672 7.174946 ACGTGTTCATCTAAGACCATTTCAATT 59.825 33.333 0.00 0.00 0.00 2.32
649 673 8.664798 CGTGTTCATCTAAGACCATTTCAATTA 58.335 33.333 0.00 0.00 0.00 1.40
747 781 1.933853 GTTTTCACCTCGATGATCGGG 59.066 52.381 15.48 11.91 40.73 5.14
757 791 3.344137 ATGATCGGGGGCGTGCTTT 62.344 57.895 0.00 0.00 0.00 3.51
783 817 7.040686 TCAGATTCATATCATTGCATCCAAGTG 60.041 37.037 0.00 0.00 33.80 3.16
843 884 2.337246 CCCGCCTTTTAACACCCCG 61.337 63.158 0.00 0.00 0.00 5.73
950 996 1.931180 GCCCTCTTTTCCCCCTCCT 60.931 63.158 0.00 0.00 0.00 3.69
1098 1144 4.759205 GCCGCCACCCCCTTCAAT 62.759 66.667 0.00 0.00 0.00 2.57
1243 1289 2.772691 GCGCTGGCGGAGTACTACT 61.773 63.158 16.61 0.00 40.19 2.57
1251 1297 1.298488 GGAGTACTACTCGCAGCGC 60.298 63.158 10.87 0.00 45.96 5.92
1252 1298 1.716826 GGAGTACTACTCGCAGCGCT 61.717 60.000 10.87 2.64 45.96 5.92
1340 1386 3.001838 CGTCACTTCATACCTCTCTCTCG 59.998 52.174 0.00 0.00 0.00 4.04
1347 1393 1.973816 TACCTCTCTCTCGCTCCGCT 61.974 60.000 0.00 0.00 0.00 5.52
1374 1420 1.520120 CGCACATGGTCGATGCTCT 60.520 57.895 6.40 0.00 37.20 4.09
1378 1424 1.662629 CACATGGTCGATGCTCTTGTC 59.337 52.381 0.00 0.00 35.15 3.18
1453 1500 6.790285 TTACTCGGTCTTGGATTTGTTTAC 57.210 37.500 0.00 0.00 0.00 2.01
1455 1502 4.755123 ACTCGGTCTTGGATTTGTTTACTG 59.245 41.667 0.00 0.00 0.00 2.74
1457 1504 3.818773 CGGTCTTGGATTTGTTTACTGGT 59.181 43.478 0.00 0.00 0.00 4.00
1461 1508 5.472137 GTCTTGGATTTGTTTACTGGTAGCA 59.528 40.000 0.00 0.00 0.00 3.49
1483 1530 0.875908 GCGTGCGCATTCCTCTGATA 60.876 55.000 15.91 0.00 41.49 2.15
1529 1576 8.149647 AGTATCTGGCAGAATGATTCTCTTAAG 58.850 37.037 22.84 0.00 39.69 1.85
1583 1633 9.262358 GATATTTGGTTAGAGTACTAGCTTTGG 57.738 37.037 0.00 0.00 31.91 3.28
1590 1640 5.763876 AGAGTACTAGCTTTGGTTTCCAT 57.236 39.130 0.00 0.00 31.53 3.41
1656 1706 6.882678 GGACCTACCTTGCTTCATAGTTTAAA 59.117 38.462 0.00 0.00 35.41 1.52
1658 1708 7.459234 ACCTACCTTGCTTCATAGTTTAAAGT 58.541 34.615 0.37 0.37 0.00 2.66
1659 1709 8.599792 ACCTACCTTGCTTCATAGTTTAAAGTA 58.400 33.333 5.24 5.24 0.00 2.24
1660 1710 9.099454 CCTACCTTGCTTCATAGTTTAAAGTAG 57.901 37.037 8.64 3.10 0.00 2.57
1661 1711 9.654663 CTACCTTGCTTCATAGTTTAAAGTAGT 57.345 33.333 8.64 1.31 0.00 2.73
1747 1797 9.433153 AGTTCCTTAAACTTGTACTATAAGTGC 57.567 33.333 0.00 0.00 46.26 4.40
1765 1815 1.234821 GCGTCAATTGTGGTTCAGGA 58.765 50.000 5.13 0.00 0.00 3.86
1788 1838 9.780186 AGGACATATTTAATTAGCAACTACTCC 57.220 33.333 0.00 0.00 0.00 3.85
1789 1839 9.000486 GGACATATTTAATTAGCAACTACTCCC 58.000 37.037 0.00 0.00 0.00 4.30
1790 1840 9.780186 GACATATTTAATTAGCAACTACTCCCT 57.220 33.333 0.00 0.00 0.00 4.20
1791 1841 9.780186 ACATATTTAATTAGCAACTACTCCCTC 57.220 33.333 0.00 0.00 0.00 4.30
1794 1844 6.869206 TTAATTAGCAACTACTCCCTCTGT 57.131 37.500 0.00 0.00 0.00 3.41
1795 1845 7.966339 TTAATTAGCAACTACTCCCTCTGTA 57.034 36.000 0.00 0.00 0.00 2.74
1796 1846 6.869206 AATTAGCAACTACTCCCTCTGTAA 57.131 37.500 0.00 0.00 0.00 2.41
1797 1847 6.869206 ATTAGCAACTACTCCCTCTGTAAA 57.131 37.500 0.00 0.00 0.00 2.01
1798 1848 6.869206 TTAGCAACTACTCCCTCTGTAAAT 57.131 37.500 0.00 0.00 0.00 1.40
1799 1849 5.763876 AGCAACTACTCCCTCTGTAAATT 57.236 39.130 0.00 0.00 0.00 1.82
1800 1850 6.869206 AGCAACTACTCCCTCTGTAAATTA 57.131 37.500 0.00 0.00 0.00 1.40
1801 1851 7.253905 AGCAACTACTCCCTCTGTAAATTAA 57.746 36.000 0.00 0.00 0.00 1.40
1802 1852 7.862675 AGCAACTACTCCCTCTGTAAATTAAT 58.137 34.615 0.00 0.00 0.00 1.40
1803 1853 8.989131 AGCAACTACTCCCTCTGTAAATTAATA 58.011 33.333 0.00 0.00 0.00 0.98
1804 1854 9.780186 GCAACTACTCCCTCTGTAAATTAATAT 57.220 33.333 0.00 0.00 0.00 1.28
1811 1861 9.360093 CTCCCTCTGTAAATTAATATAAGAGCG 57.640 37.037 9.98 4.77 0.00 5.03
1812 1862 8.867097 TCCCTCTGTAAATTAATATAAGAGCGT 58.133 33.333 9.98 0.00 0.00 5.07
1813 1863 9.490379 CCCTCTGTAAATTAATATAAGAGCGTT 57.510 33.333 9.98 0.00 0.00 4.84
1829 1879 9.953697 ATAAGAGCGTTTAGATCACTAAAGTAG 57.046 33.333 0.00 0.00 45.42 2.57
1830 1880 6.797454 AGAGCGTTTAGATCACTAAAGTAGG 58.203 40.000 0.00 0.00 45.42 3.18
1831 1881 6.377712 AGAGCGTTTAGATCACTAAAGTAGGT 59.622 38.462 0.00 0.00 45.42 3.08
1849 1899 0.663153 GTTCCTGTTGCGCTTTGACT 59.337 50.000 9.73 0.00 0.00 3.41
1875 1925 1.623811 GTACCCACAGTCTGACCATGT 59.376 52.381 6.91 0.26 0.00 3.21
1897 1947 6.598503 TGTGATTGAATATCCATCAGAAGCT 58.401 36.000 0.00 0.00 0.00 3.74
1898 1948 6.709397 TGTGATTGAATATCCATCAGAAGCTC 59.291 38.462 0.00 0.00 0.00 4.09
1899 1949 5.930569 TGATTGAATATCCATCAGAAGCTCG 59.069 40.000 0.00 0.00 0.00 5.03
1901 1951 6.405278 TTGAATATCCATCAGAAGCTCGTA 57.595 37.500 0.00 0.00 0.00 3.43
1902 1952 6.018589 TGAATATCCATCAGAAGCTCGTAG 57.981 41.667 0.00 0.00 0.00 3.51
1903 1953 2.810439 ATCCATCAGAAGCTCGTAGC 57.190 50.000 0.00 0.00 42.84 3.58
1904 1954 0.747255 TCCATCAGAAGCTCGTAGCC 59.253 55.000 0.00 0.00 43.77 3.93
1905 1955 0.749649 CCATCAGAAGCTCGTAGCCT 59.250 55.000 0.00 0.00 43.77 4.58
1906 1956 1.137872 CCATCAGAAGCTCGTAGCCTT 59.862 52.381 0.00 0.00 43.77 4.35
1907 1957 2.419297 CCATCAGAAGCTCGTAGCCTTT 60.419 50.000 0.00 0.00 43.77 3.11
1908 1958 3.265791 CATCAGAAGCTCGTAGCCTTTT 58.734 45.455 0.00 0.00 43.77 2.27
1909 1959 3.402628 TCAGAAGCTCGTAGCCTTTTT 57.597 42.857 0.00 0.00 43.77 1.94
1952 2002 3.883830 AGTGGAGTTGCAGAGTATGAG 57.116 47.619 0.00 0.00 0.00 2.90
1962 2012 5.537300 TGCAGAGTATGAGTAGGGAAATC 57.463 43.478 0.00 0.00 0.00 2.17
1969 2019 9.030452 AGAGTATGAGTAGGGAAATCATCATAC 57.970 37.037 12.85 12.85 44.91 2.39
1996 2046 8.165239 TGGCAACACCTACATTATGATTTATC 57.835 34.615 0.00 0.00 46.17 1.75
1997 2047 7.998383 TGGCAACACCTACATTATGATTTATCT 59.002 33.333 0.00 0.00 46.17 1.98
1999 2049 9.884465 GCAACACCTACATTATGATTTATCTTC 57.116 33.333 0.00 0.00 0.00 2.87
2063 2121 9.804758 TTTTCTAGATAGCTCAAGTACTTAAGC 57.195 33.333 21.32 21.32 34.95 3.09
2067 2125 9.810545 CTAGATAGCTCAAGTACTTAAGCTTTT 57.189 33.333 32.99 22.44 42.23 2.27
2085 2143 6.963017 GCTTTTGCAATCATGAAAAACAAG 57.037 33.333 0.00 0.00 38.82 3.16
2088 2146 7.254522 GCTTTTGCAATCATGAAAAACAAGAGA 60.255 33.333 17.97 5.52 38.82 3.10
2091 2149 6.160684 TGCAATCATGAAAAACAAGAGATGG 58.839 36.000 0.00 0.00 29.78 3.51
2092 2150 5.063060 GCAATCATGAAAAACAAGAGATGGC 59.937 40.000 0.00 0.00 32.53 4.40
2093 2151 6.395629 CAATCATGAAAAACAAGAGATGGCT 58.604 36.000 0.00 0.00 29.78 4.75
2154 2212 3.376082 GACCAGTAGTCAGGTCCCA 57.624 57.895 0.00 0.00 46.79 4.37
2173 2231 4.021544 TCCCATTAACCAAATGCTTCACAC 60.022 41.667 0.00 0.00 43.18 3.82
2177 2235 5.699097 TTAACCAAATGCTTCACACCTAC 57.301 39.130 0.00 0.00 0.00 3.18
2180 2238 3.149196 CCAAATGCTTCACACCTACTGT 58.851 45.455 0.00 0.00 0.00 3.55
2181 2239 4.202419 ACCAAATGCTTCACACCTACTGTA 60.202 41.667 0.00 0.00 0.00 2.74
2182 2240 4.943705 CCAAATGCTTCACACCTACTGTAT 59.056 41.667 0.00 0.00 0.00 2.29
2183 2241 5.415701 CCAAATGCTTCACACCTACTGTATT 59.584 40.000 0.00 0.00 0.00 1.89
2184 2242 6.597672 CCAAATGCTTCACACCTACTGTATTA 59.402 38.462 0.00 0.00 0.00 0.98
2194 2252 8.512138 TCACACCTACTGTATTATGTATGATCG 58.488 37.037 0.00 0.00 0.00 3.69
2197 2255 7.755373 CACCTACTGTATTATGTATGATCGTGG 59.245 40.741 0.00 0.00 0.00 4.94
2232 2290 7.487822 TGGAAACTGGAGAGATATATCATCC 57.512 40.000 21.71 21.71 36.21 3.51
2280 2341 4.976224 CATGAAAATCATGTGCTCTCCA 57.024 40.909 11.31 0.00 46.80 3.86
2326 2388 4.081087 AGACCTAATTCTACAACCATGCGT 60.081 41.667 0.00 0.00 0.00 5.24
2329 2391 7.014905 AGACCTAATTCTACAACCATGCGTATA 59.985 37.037 0.00 0.00 0.00 1.47
2340 2402 3.938963 ACCATGCGTATACTGTTTTGAGG 59.061 43.478 0.56 0.00 0.00 3.86
2359 2421 3.775316 GAGGAAAACATCTGGGAGTCCTA 59.225 47.826 9.58 1.02 34.17 2.94
2364 2426 4.883021 AACATCTGGGAGTCCTAGACTA 57.117 45.455 26.07 6.14 43.53 2.59
2377 2439 7.255660 GGAGTCCTAGACTACATTTACCTGATG 60.256 44.444 0.41 0.00 43.53 3.07
2422 2516 5.880054 ACTCAGTGGTATTTGCAACATAC 57.120 39.130 16.80 16.80 0.00 2.39
2473 2568 3.637273 GGGGGTCACTGTTCGCCT 61.637 66.667 12.89 0.00 36.96 5.52
2481 2576 4.060205 GGTCACTGTTCGCCTAAGTTTTA 58.940 43.478 0.00 0.00 0.00 1.52
2534 2629 7.485418 TTGATCTTGTAGTTTCTGCGTAAAA 57.515 32.000 0.00 0.00 0.00 1.52
2537 2632 8.015087 TGATCTTGTAGTTTCTGCGTAAAATTG 58.985 33.333 0.00 0.00 0.00 2.32
2555 2650 6.385649 AAATTGTAAACTTCCACACACGAT 57.614 33.333 0.00 0.00 0.00 3.73
2582 2677 4.853924 TCTCTTTTCAAACAATCTGCCC 57.146 40.909 0.00 0.00 0.00 5.36
2589 2684 6.723298 TTTCAAACAATCTGCCCTTTTCTA 57.277 33.333 0.00 0.00 0.00 2.10
2601 2696 7.736893 TCTGCCCTTTTCTAGAGATATTTACC 58.263 38.462 0.00 0.00 0.00 2.85
2623 2718 6.979465 ACCGTAATTTATGTCTAGTAGAGGC 58.021 40.000 0.00 0.00 0.00 4.70
2647 2742 5.485620 TCTTCTGATTCTCACACTTGATGG 58.514 41.667 0.00 0.00 0.00 3.51
2665 2760 9.277783 ACTTGATGGACATATAGCAAGTTTATC 57.722 33.333 9.84 0.00 42.07 1.75
2728 2823 5.831103 ACATTGTTGGATAGGTTTCCTCAT 58.169 37.500 0.00 0.00 36.68 2.90
2749 2844 7.147958 TCATGTCCCTGGAATATACAATCAA 57.852 36.000 0.00 0.00 0.00 2.57
2815 2910 1.844687 AGGGAGGCATCTTTTTCTGC 58.155 50.000 0.00 0.00 37.66 4.26
2852 2947 1.805869 CAGAGCTTCTCACCAAGGTG 58.194 55.000 13.03 13.03 46.64 4.00
2872 2967 7.624360 AGGTGTGTATTTATGTGTGTAATGG 57.376 36.000 0.00 0.00 0.00 3.16
2896 2991 3.964909 ACACAGTTTCTTTGAAATCCGC 58.035 40.909 0.00 0.00 0.00 5.54
2924 3019 3.523606 TTACTAAACGCAATCGCCCTA 57.476 42.857 0.00 0.00 39.84 3.53
2944 3039 5.397899 CCCTAGATTATCAGTTGCCCTTGAA 60.398 44.000 0.00 0.00 0.00 2.69
3041 3136 8.826710 TCTGGATTACAACATATTGAAATCGTC 58.173 33.333 0.00 0.00 39.30 4.20
3057 3153 6.708502 TGAAATCGTCAAAACATAGAAGACCA 59.291 34.615 0.00 0.00 31.51 4.02
3082 3178 6.315393 ACAAACGTCATAACTCTTGTGTTCTT 59.685 34.615 0.00 0.00 30.86 2.52
3184 3291 4.553330 ACGTACCATCTGTTCTCCAATT 57.447 40.909 0.00 0.00 0.00 2.32
3250 3357 3.474600 CTGCTCCAATATCCTCAACTGG 58.525 50.000 0.00 0.00 0.00 4.00
3299 3406 7.236529 AGATATTGTTGCCTGATGGTTCATAT 58.763 34.615 0.00 0.00 35.27 1.78
3371 3478 1.024271 TTGAGCAATATCGCCAAGCC 58.976 50.000 0.00 0.00 0.00 4.35
3404 3511 1.904287 TCAAAGCAGGTAAACGGCAT 58.096 45.000 0.00 0.00 43.19 4.40
3507 3614 1.076485 ATGAACTGCATCCCCAGGC 60.076 57.895 0.00 0.00 37.16 4.85
3519 3626 1.454479 CCCAGGCTTCGATGGCATT 60.454 57.895 23.87 4.41 35.10 3.56
3558 3665 4.406648 TGGCTACATCATCGATCAGTTT 57.593 40.909 0.00 0.00 0.00 2.66
3567 3674 4.748892 TCATCGATCAGTTTCTCAAGGAC 58.251 43.478 0.00 0.00 0.00 3.85
3573 3680 2.565391 TCAGTTTCTCAAGGACGGCATA 59.435 45.455 0.00 0.00 0.00 3.14
3588 3695 1.426041 GCATAAACGACCGCACCGAT 61.426 55.000 0.00 0.00 0.00 4.18
3594 3701 1.585521 CGACCGCACCGATGAGTAC 60.586 63.158 0.00 0.00 0.00 2.73
3654 3761 2.043248 ACCCGAGCCGTGGTATCT 60.043 61.111 6.15 0.00 31.03 1.98
3699 3806 3.256960 AGGGTGTCACCGGCCATT 61.257 61.111 15.93 0.00 39.83 3.16
3714 3821 0.606401 CCATTGACCACCTTGACGCT 60.606 55.000 0.00 0.00 0.00 5.07
3717 3824 1.873698 TTGACCACCTTGACGCTTAC 58.126 50.000 0.00 0.00 0.00 2.34
3810 3917 2.181021 GCCTACCTCCACGTGACG 59.819 66.667 19.30 2.24 0.00 4.35
3879 3986 4.882396 GCCGAGGAAGAGAGCCGC 62.882 72.222 0.00 0.00 0.00 6.53
4011 4118 2.885113 GGGCGGCTGTTCATTTCC 59.115 61.111 9.56 0.00 0.00 3.13
4171 4278 4.082354 GTGTACAAGGTTAGTGATCGGAGT 60.082 45.833 0.00 0.00 0.00 3.85
4181 4288 4.138487 AGTGATCGGAGTTGGGATTTAC 57.862 45.455 0.00 0.00 0.00 2.01
4314 5774 8.106247 ACGTGACTGTAATTTATTTCACCAAT 57.894 30.769 0.00 0.00 31.57 3.16
4558 6021 9.491675 TTTCGTAACATGATGGTTTCTACTTTA 57.508 29.630 0.00 0.00 32.29 1.85
4568 6031 8.087750 TGATGGTTTCTACTTTAAAAATGGCTG 58.912 33.333 0.00 0.00 0.00 4.85
4584 6048 9.482627 AAAAATGGCTGACAACGATTTTTATAA 57.517 25.926 17.45 0.00 35.49 0.98
4629 6094 6.293004 CCCCCTTTTTCAGCAATACATTTA 57.707 37.500 0.00 0.00 0.00 1.40
4708 6178 1.135402 CCACTTTGGCCGTTTGCTATC 60.135 52.381 0.00 0.00 40.92 2.08
4727 6197 0.245539 CGTACTGATGGTTGGGACGT 59.754 55.000 0.00 0.00 0.00 4.34
4728 6198 1.722011 GTACTGATGGTTGGGACGTG 58.278 55.000 0.00 0.00 0.00 4.49
4738 6208 1.579084 TTGGGACGTGTTATTGCGCC 61.579 55.000 4.18 0.00 0.00 6.53
4752 6222 4.454948 CGCCCCGCATAAGATGAA 57.545 55.556 0.00 0.00 0.00 2.57
4753 6223 2.932663 CGCCCCGCATAAGATGAAT 58.067 52.632 0.00 0.00 0.00 2.57
4754 6224 1.238439 CGCCCCGCATAAGATGAATT 58.762 50.000 0.00 0.00 0.00 2.17
4755 6225 1.608590 CGCCCCGCATAAGATGAATTT 59.391 47.619 0.00 0.00 0.00 1.82
4756 6226 2.605338 CGCCCCGCATAAGATGAATTTG 60.605 50.000 0.00 0.00 0.00 2.32
4757 6227 2.863704 GCCCCGCATAAGATGAATTTGC 60.864 50.000 0.00 0.00 0.00 3.68
4761 6231 3.360249 GCATAAGATGAATTTGCGCCT 57.640 42.857 4.18 0.00 0.00 5.52
4762 6232 3.709987 GCATAAGATGAATTTGCGCCTT 58.290 40.909 4.18 0.06 0.00 4.35
4763 6233 4.858935 GCATAAGATGAATTTGCGCCTTA 58.141 39.130 4.18 2.71 0.00 2.69
4764 6234 4.913924 GCATAAGATGAATTTGCGCCTTAG 59.086 41.667 4.18 0.00 0.00 2.18
4765 6235 3.427161 AAGATGAATTTGCGCCTTAGC 57.573 42.857 4.18 0.00 37.71 3.09
4766 6236 1.678101 AGATGAATTTGCGCCTTAGCC 59.322 47.619 4.18 0.00 36.02 3.93
4767 6237 1.405105 GATGAATTTGCGCCTTAGCCA 59.595 47.619 4.18 0.00 36.02 4.75
4768 6238 1.252175 TGAATTTGCGCCTTAGCCAA 58.748 45.000 4.18 0.00 36.02 4.52
4769 6239 1.067915 TGAATTTGCGCCTTAGCCAAC 60.068 47.619 4.18 0.00 36.02 3.77
4770 6240 1.202348 GAATTTGCGCCTTAGCCAACT 59.798 47.619 4.18 0.00 36.02 3.16
4771 6241 2.122783 ATTTGCGCCTTAGCCAACTA 57.877 45.000 4.18 0.00 36.02 2.24
4772 6242 2.122783 TTTGCGCCTTAGCCAACTAT 57.877 45.000 4.18 0.00 36.02 2.12
4773 6243 1.663695 TTGCGCCTTAGCCAACTATC 58.336 50.000 4.18 0.00 36.02 2.08
4774 6244 0.830648 TGCGCCTTAGCCAACTATCT 59.169 50.000 4.18 0.00 36.02 1.98
4775 6245 1.202533 TGCGCCTTAGCCAACTATCTC 60.203 52.381 4.18 0.00 36.02 2.75
4776 6246 1.202533 GCGCCTTAGCCAACTATCTCA 60.203 52.381 0.00 0.00 34.57 3.27
4777 6247 2.474816 CGCCTTAGCCAACTATCTCAC 58.525 52.381 0.00 0.00 34.57 3.51
4778 6248 2.159099 CGCCTTAGCCAACTATCTCACA 60.159 50.000 0.00 0.00 34.57 3.58
4779 6249 3.678806 CGCCTTAGCCAACTATCTCACAA 60.679 47.826 0.00 0.00 34.57 3.33
4780 6250 4.261801 GCCTTAGCCAACTATCTCACAAA 58.738 43.478 0.00 0.00 0.00 2.83
4781 6251 4.700213 GCCTTAGCCAACTATCTCACAAAA 59.300 41.667 0.00 0.00 0.00 2.44
4782 6252 5.392057 GCCTTAGCCAACTATCTCACAAAAC 60.392 44.000 0.00 0.00 0.00 2.43
4783 6253 5.163854 CCTTAGCCAACTATCTCACAAAACG 60.164 44.000 0.00 0.00 0.00 3.60
4784 6254 4.002906 AGCCAACTATCTCACAAAACGA 57.997 40.909 0.00 0.00 0.00 3.85
4785 6255 3.997021 AGCCAACTATCTCACAAAACGAG 59.003 43.478 0.00 0.00 0.00 4.18
4786 6256 3.424962 GCCAACTATCTCACAAAACGAGC 60.425 47.826 0.00 0.00 0.00 5.03
4787 6257 3.125316 CCAACTATCTCACAAAACGAGCC 59.875 47.826 0.00 0.00 0.00 4.70
4788 6258 2.973945 ACTATCTCACAAAACGAGCCC 58.026 47.619 0.00 0.00 0.00 5.19
4789 6259 1.927174 CTATCTCACAAAACGAGCCCG 59.073 52.381 0.00 0.00 42.50 6.13
4790 6260 0.320374 ATCTCACAAAACGAGCCCGA 59.680 50.000 0.00 0.00 39.50 5.14
4791 6261 0.320374 TCTCACAAAACGAGCCCGAT 59.680 50.000 0.00 0.00 39.50 4.18
4792 6262 1.156736 CTCACAAAACGAGCCCGATT 58.843 50.000 0.00 0.00 39.50 3.34
4793 6263 1.128692 CTCACAAAACGAGCCCGATTC 59.871 52.381 0.00 0.00 39.50 2.52
4794 6264 0.168128 CACAAAACGAGCCCGATTCC 59.832 55.000 0.00 0.00 39.50 3.01
4795 6265 0.958876 ACAAAACGAGCCCGATTCCC 60.959 55.000 0.00 0.00 39.50 3.97
4796 6266 1.378119 AAAACGAGCCCGATTCCCC 60.378 57.895 0.00 0.00 39.50 4.81
4797 6267 2.831894 AAAACGAGCCCGATTCCCCC 62.832 60.000 0.00 0.00 39.50 5.40
4813 6283 4.899239 CCGGCGTGCCTCCATCTC 62.899 72.222 9.55 0.00 0.00 2.75
4814 6284 4.147449 CGGCGTGCCTCCATCTCA 62.147 66.667 9.55 0.00 0.00 3.27
4815 6285 2.512515 GGCGTGCCTCCATCTCAC 60.513 66.667 2.98 0.00 0.00 3.51
4816 6286 2.265739 GCGTGCCTCCATCTCACA 59.734 61.111 0.00 0.00 0.00 3.58
4817 6287 1.375908 GCGTGCCTCCATCTCACAA 60.376 57.895 0.00 0.00 0.00 3.33
4818 6288 0.955428 GCGTGCCTCCATCTCACAAA 60.955 55.000 0.00 0.00 0.00 2.83
4819 6289 1.522668 CGTGCCTCCATCTCACAAAA 58.477 50.000 0.00 0.00 0.00 2.44
4820 6290 1.879380 CGTGCCTCCATCTCACAAAAA 59.121 47.619 0.00 0.00 0.00 1.94
4845 6315 9.809096 AAAAGAAAAGAAAATCTTTCTCACCTC 57.191 29.630 5.86 0.14 45.19 3.85
4846 6316 8.525290 AAGAAAAGAAAATCTTTCTCACCTCA 57.475 30.769 5.86 0.00 45.19 3.86
4847 6317 8.525290 AGAAAAGAAAATCTTTCTCACCTCAA 57.475 30.769 5.86 0.00 45.19 3.02
4848 6318 8.409371 AGAAAAGAAAATCTTTCTCACCTCAAC 58.591 33.333 5.86 0.00 45.19 3.18
4849 6319 6.641169 AAGAAAATCTTTCTCACCTCAACC 57.359 37.500 2.28 0.00 31.57 3.77
4850 6320 5.694995 AGAAAATCTTTCTCACCTCAACCA 58.305 37.500 0.00 0.00 0.00 3.67
4851 6321 6.129179 AGAAAATCTTTCTCACCTCAACCAA 58.871 36.000 0.00 0.00 0.00 3.67
4852 6322 5.774498 AAATCTTTCTCACCTCAACCAAC 57.226 39.130 0.00 0.00 0.00 3.77
4853 6323 4.713792 ATCTTTCTCACCTCAACCAACT 57.286 40.909 0.00 0.00 0.00 3.16
4854 6324 5.825593 ATCTTTCTCACCTCAACCAACTA 57.174 39.130 0.00 0.00 0.00 2.24
4855 6325 5.215252 TCTTTCTCACCTCAACCAACTAG 57.785 43.478 0.00 0.00 0.00 2.57
4856 6326 4.040461 TCTTTCTCACCTCAACCAACTAGG 59.960 45.833 0.00 0.00 45.67 3.02
4857 6327 3.254093 TCTCACCTCAACCAACTAGGA 57.746 47.619 0.00 0.00 41.22 2.94
4858 6328 3.165875 TCTCACCTCAACCAACTAGGAG 58.834 50.000 0.00 0.00 41.22 3.69
4859 6329 3.165875 CTCACCTCAACCAACTAGGAGA 58.834 50.000 0.00 0.00 41.22 3.71
4860 6330 3.772025 CTCACCTCAACCAACTAGGAGAT 59.228 47.826 0.00 0.00 41.22 2.75
4861 6331 3.515502 TCACCTCAACCAACTAGGAGATG 59.484 47.826 0.00 0.00 41.22 2.90
4862 6332 3.515502 CACCTCAACCAACTAGGAGATGA 59.484 47.826 0.00 0.00 41.22 2.92
4863 6333 3.515901 ACCTCAACCAACTAGGAGATGAC 59.484 47.826 0.00 0.00 41.22 3.06
4864 6334 3.515502 CCTCAACCAACTAGGAGATGACA 59.484 47.826 0.00 0.00 41.22 3.58
4865 6335 4.163078 CCTCAACCAACTAGGAGATGACAT 59.837 45.833 0.00 0.00 41.22 3.06
4866 6336 5.089970 TCAACCAACTAGGAGATGACATG 57.910 43.478 0.00 0.00 41.22 3.21
4867 6337 4.532126 TCAACCAACTAGGAGATGACATGT 59.468 41.667 0.00 0.00 41.22 3.21
4868 6338 4.478206 ACCAACTAGGAGATGACATGTG 57.522 45.455 1.15 0.00 41.22 3.21
4869 6339 3.198635 ACCAACTAGGAGATGACATGTGG 59.801 47.826 1.15 0.00 41.22 4.17
4870 6340 3.432749 CCAACTAGGAGATGACATGTGGG 60.433 52.174 1.15 0.00 41.22 4.61
4871 6341 3.404869 ACTAGGAGATGACATGTGGGA 57.595 47.619 1.15 0.00 0.00 4.37
4872 6342 3.034635 ACTAGGAGATGACATGTGGGAC 58.965 50.000 1.15 0.00 0.00 4.46
4873 6343 1.207791 AGGAGATGACATGTGGGACC 58.792 55.000 1.15 0.08 0.00 4.46
4874 6344 1.207791 GGAGATGACATGTGGGACCT 58.792 55.000 1.15 0.00 0.00 3.85
4875 6345 1.561542 GGAGATGACATGTGGGACCTT 59.438 52.381 1.15 0.00 0.00 3.50
4876 6346 2.771943 GGAGATGACATGTGGGACCTTA 59.228 50.000 1.15 0.00 0.00 2.69
4877 6347 3.432326 GGAGATGACATGTGGGACCTTAC 60.432 52.174 1.15 0.00 0.00 2.34
4878 6348 3.181329 AGATGACATGTGGGACCTTACA 58.819 45.455 1.15 4.90 0.00 2.41
4879 6349 3.782523 AGATGACATGTGGGACCTTACAT 59.217 43.478 1.15 8.52 37.99 2.29
4880 6350 3.627395 TGACATGTGGGACCTTACATC 57.373 47.619 1.15 4.73 35.46 3.06
4881 6351 2.238646 TGACATGTGGGACCTTACATCC 59.761 50.000 1.15 7.64 35.46 3.51
4882 6352 2.238646 GACATGTGGGACCTTACATCCA 59.761 50.000 1.15 0.00 38.06 3.41
4883 6353 2.852449 ACATGTGGGACCTTACATCCAT 59.148 45.455 0.00 0.57 38.06 3.41
4884 6354 3.117888 ACATGTGGGACCTTACATCCATC 60.118 47.826 0.00 0.00 38.06 3.51
4885 6355 2.845659 TGTGGGACCTTACATCCATCT 58.154 47.619 0.00 0.00 38.06 2.90
4886 6356 4.002256 TGTGGGACCTTACATCCATCTA 57.998 45.455 0.00 0.00 38.06 1.98
4887 6357 4.367166 TGTGGGACCTTACATCCATCTAA 58.633 43.478 0.00 0.00 38.06 2.10
4888 6358 4.785914 TGTGGGACCTTACATCCATCTAAA 59.214 41.667 0.00 0.00 38.06 1.85
4889 6359 5.251932 TGTGGGACCTTACATCCATCTAAAA 59.748 40.000 0.00 0.00 38.06 1.52
4890 6360 6.184789 GTGGGACCTTACATCCATCTAAAAA 58.815 40.000 0.00 0.00 38.06 1.94
4917 6387 9.803315 AAAGACTCACTTCCATTTTAAAAGAAC 57.197 29.630 6.79 0.00 37.93 3.01
4918 6388 8.519799 AGACTCACTTCCATTTTAAAAGAACA 57.480 30.769 6.79 0.00 0.00 3.18
4919 6389 8.966868 AGACTCACTTCCATTTTAAAAGAACAA 58.033 29.630 6.79 0.00 0.00 2.83
4920 6390 9.581099 GACTCACTTCCATTTTAAAAGAACAAA 57.419 29.630 6.79 0.00 0.00 2.83
4921 6391 9.366216 ACTCACTTCCATTTTAAAAGAACAAAC 57.634 29.630 6.79 0.00 0.00 2.93
4922 6392 8.710835 TCACTTCCATTTTAAAAGAACAAACC 57.289 30.769 6.79 0.00 0.00 3.27
4923 6393 8.314751 TCACTTCCATTTTAAAAGAACAAACCA 58.685 29.630 6.79 0.00 0.00 3.67
4924 6394 8.940952 CACTTCCATTTTAAAAGAACAAACCAA 58.059 29.630 6.79 0.00 0.00 3.67
4925 6395 9.508642 ACTTCCATTTTAAAAGAACAAACCAAA 57.491 25.926 6.79 0.00 0.00 3.28
4928 6398 9.508642 TCCATTTTAAAAGAACAAACCAAAACT 57.491 25.926 6.79 0.00 0.00 2.66
4935 6405 8.669946 AAAAGAACAAACCAAAACTTTTCTCA 57.330 26.923 0.00 0.00 34.09 3.27
4936 6406 7.889589 AAGAACAAACCAAAACTTTTCTCAG 57.110 32.000 0.00 0.00 0.00 3.35
4937 6407 7.227049 AGAACAAACCAAAACTTTTCTCAGA 57.773 32.000 0.00 0.00 0.00 3.27
4938 6408 7.840931 AGAACAAACCAAAACTTTTCTCAGAT 58.159 30.769 0.00 0.00 0.00 2.90
4939 6409 8.966868 AGAACAAACCAAAACTTTTCTCAGATA 58.033 29.630 0.00 0.00 0.00 1.98
4940 6410 9.581099 GAACAAACCAAAACTTTTCTCAGATAA 57.419 29.630 0.00 0.00 0.00 1.75
4941 6411 9.936759 AACAAACCAAAACTTTTCTCAGATAAA 57.063 25.926 0.00 0.00 0.00 1.40
4942 6412 9.936759 ACAAACCAAAACTTTTCTCAGATAAAA 57.063 25.926 0.00 0.00 0.00 1.52
4959 6429 1.859302 AAAAAGTTCCACCACAGCCA 58.141 45.000 0.00 0.00 0.00 4.75
4960 6430 1.859302 AAAAGTTCCACCACAGCCAA 58.141 45.000 0.00 0.00 0.00 4.52
4961 6431 1.111277 AAAGTTCCACCACAGCCAAC 58.889 50.000 0.00 0.00 0.00 3.77
4962 6432 0.755327 AAGTTCCACCACAGCCAACC 60.755 55.000 0.00 0.00 0.00 3.77
4963 6433 1.454847 GTTCCACCACAGCCAACCA 60.455 57.895 0.00 0.00 0.00 3.67
4964 6434 1.152777 TTCCACCACAGCCAACCAG 60.153 57.895 0.00 0.00 0.00 4.00
4965 6435 3.297620 CCACCACAGCCAACCAGC 61.298 66.667 0.00 0.00 0.00 4.85
4966 6436 2.519063 CACCACAGCCAACCAGCA 60.519 61.111 0.00 0.00 34.23 4.41
4967 6437 2.203394 ACCACAGCCAACCAGCAG 60.203 61.111 0.00 0.00 34.23 4.24
4968 6438 2.987547 CCACAGCCAACCAGCAGG 60.988 66.667 0.00 0.00 42.21 4.85
4981 6451 3.724494 GCAGGTCCTTATGCGCTC 58.276 61.111 9.73 0.00 31.87 5.03
4982 6452 2.240500 GCAGGTCCTTATGCGCTCG 61.241 63.158 9.73 0.00 31.87 5.03
4983 6453 1.141881 CAGGTCCTTATGCGCTCGT 59.858 57.895 9.73 0.00 0.00 4.18
4984 6454 0.460284 CAGGTCCTTATGCGCTCGTT 60.460 55.000 9.73 0.00 0.00 3.85
4985 6455 0.249398 AGGTCCTTATGCGCTCGTTT 59.751 50.000 9.73 0.00 0.00 3.60
4986 6456 0.651031 GGTCCTTATGCGCTCGTTTC 59.349 55.000 9.73 0.00 0.00 2.78
4987 6457 0.651031 GTCCTTATGCGCTCGTTTCC 59.349 55.000 9.73 0.00 0.00 3.13
4988 6458 0.248012 TCCTTATGCGCTCGTTTCCA 59.752 50.000 9.73 0.00 0.00 3.53
4989 6459 1.134521 TCCTTATGCGCTCGTTTCCAT 60.135 47.619 9.73 0.00 0.00 3.41
4990 6460 1.670811 CCTTATGCGCTCGTTTCCATT 59.329 47.619 9.73 0.00 0.00 3.16
4991 6461 2.097466 CCTTATGCGCTCGTTTCCATTT 59.903 45.455 9.73 0.00 0.00 2.32
4992 6462 3.354397 CTTATGCGCTCGTTTCCATTTC 58.646 45.455 9.73 0.00 0.00 2.17
4993 6463 1.164411 ATGCGCTCGTTTCCATTTCA 58.836 45.000 9.73 0.00 0.00 2.69
4994 6464 0.947960 TGCGCTCGTTTCCATTTCAA 59.052 45.000 9.73 0.00 0.00 2.69
4995 6465 1.335182 TGCGCTCGTTTCCATTTCAAA 59.665 42.857 9.73 0.00 0.00 2.69
4996 6466 1.978782 GCGCTCGTTTCCATTTCAAAG 59.021 47.619 0.00 0.00 0.00 2.77
4997 6467 2.350388 GCGCTCGTTTCCATTTCAAAGA 60.350 45.455 0.00 0.00 0.00 2.52
4998 6468 3.851838 GCGCTCGTTTCCATTTCAAAGAA 60.852 43.478 0.00 0.00 0.00 2.52
4999 6469 4.286910 CGCTCGTTTCCATTTCAAAGAAA 58.713 39.130 0.00 0.00 0.00 2.52
5000 6470 4.737765 CGCTCGTTTCCATTTCAAAGAAAA 59.262 37.500 0.00 0.00 31.71 2.29
5001 6471 5.231147 CGCTCGTTTCCATTTCAAAGAAAAA 59.769 36.000 0.00 0.00 31.71 1.94
5052 6522 8.920509 AATTATAAATGGTAAACGTTTGAGGC 57.079 30.769 23.46 10.32 38.68 4.70
5053 6523 3.653539 AAATGGTAAACGTTTGAGGCC 57.346 42.857 23.46 18.11 36.94 5.19
5054 6524 1.161843 ATGGTAAACGTTTGAGGCCG 58.838 50.000 23.46 0.00 0.00 6.13
5055 6525 0.885596 TGGTAAACGTTTGAGGCCGG 60.886 55.000 23.46 0.00 0.00 6.13
5056 6526 1.208358 GTAAACGTTTGAGGCCGGC 59.792 57.895 23.46 21.18 0.00 6.13
5057 6527 2.319096 TAAACGTTTGAGGCCGGCG 61.319 57.895 23.46 7.07 0.00 6.46
5082 6552 4.697756 CGAAGCTTGGGCCGGTCA 62.698 66.667 9.07 1.16 39.73 4.02
5083 6553 3.056328 GAAGCTTGGGCCGGTCAC 61.056 66.667 9.07 0.00 39.73 3.67
5095 6565 4.112341 GGTCACGCGCGGTACTCT 62.112 66.667 35.22 8.98 0.00 3.24
5096 6566 2.126580 GTCACGCGCGGTACTCTT 60.127 61.111 35.22 8.09 0.00 2.85
5097 6567 2.126618 TCACGCGCGGTACTCTTG 60.127 61.111 35.22 20.89 0.00 3.02
5098 6568 3.838795 CACGCGCGGTACTCTTGC 61.839 66.667 35.22 0.00 0.00 4.01
5101 6571 3.488090 GCGCGGTACTCTTGCCAC 61.488 66.667 8.83 0.00 0.00 5.01
5102 6572 2.261671 CGCGGTACTCTTGCCACT 59.738 61.111 0.00 0.00 0.00 4.00
5103 6573 1.805945 CGCGGTACTCTTGCCACTC 60.806 63.158 0.00 0.00 0.00 3.51
5104 6574 1.448013 GCGGTACTCTTGCCACTCC 60.448 63.158 0.00 0.00 0.00 3.85
5105 6575 1.889530 GCGGTACTCTTGCCACTCCT 61.890 60.000 0.00 0.00 0.00 3.69
5106 6576 0.108615 CGGTACTCTTGCCACTCCTG 60.109 60.000 0.00 0.00 0.00 3.86
5107 6577 1.267121 GGTACTCTTGCCACTCCTGA 58.733 55.000 0.00 0.00 0.00 3.86
5108 6578 1.834263 GGTACTCTTGCCACTCCTGAT 59.166 52.381 0.00 0.00 0.00 2.90
5109 6579 3.031736 GGTACTCTTGCCACTCCTGATA 58.968 50.000 0.00 0.00 0.00 2.15
5110 6580 3.068873 GGTACTCTTGCCACTCCTGATAG 59.931 52.174 0.00 0.00 0.00 2.08
5111 6581 1.484240 ACTCTTGCCACTCCTGATAGC 59.516 52.381 0.00 0.00 0.00 2.97
5112 6582 1.761784 CTCTTGCCACTCCTGATAGCT 59.238 52.381 0.00 0.00 0.00 3.32
5113 6583 2.170187 CTCTTGCCACTCCTGATAGCTT 59.830 50.000 0.00 0.00 0.00 3.74
5114 6584 2.573462 TCTTGCCACTCCTGATAGCTTT 59.427 45.455 0.00 0.00 0.00 3.51
5115 6585 2.698855 TGCCACTCCTGATAGCTTTC 57.301 50.000 0.00 0.00 0.00 2.62
5116 6586 1.210478 TGCCACTCCTGATAGCTTTCC 59.790 52.381 0.00 0.00 0.00 3.13
5117 6587 1.210478 GCCACTCCTGATAGCTTTCCA 59.790 52.381 0.00 0.00 0.00 3.53
5118 6588 2.911484 CCACTCCTGATAGCTTTCCAC 58.089 52.381 0.00 0.00 0.00 4.02
5119 6589 2.544685 CACTCCTGATAGCTTTCCACG 58.455 52.381 0.00 0.00 0.00 4.94
5120 6590 2.093973 CACTCCTGATAGCTTTCCACGT 60.094 50.000 0.00 0.00 0.00 4.49
5121 6591 2.093973 ACTCCTGATAGCTTTCCACGTG 60.094 50.000 9.08 9.08 0.00 4.49
5122 6592 1.207089 TCCTGATAGCTTTCCACGTGG 59.793 52.381 29.26 29.26 0.00 4.94
5123 6593 1.066143 CCTGATAGCTTTCCACGTGGT 60.066 52.381 32.74 16.78 36.34 4.16
5124 6594 2.271800 CTGATAGCTTTCCACGTGGTC 58.728 52.381 32.74 21.21 36.34 4.02
5125 6595 1.066430 TGATAGCTTTCCACGTGGTCC 60.066 52.381 32.74 18.85 36.34 4.46
5126 6596 0.252197 ATAGCTTTCCACGTGGTCCC 59.748 55.000 32.74 19.17 36.34 4.46
5127 6597 1.122632 TAGCTTTCCACGTGGTCCCA 61.123 55.000 32.74 12.31 36.34 4.37
5128 6598 2.258726 GCTTTCCACGTGGTCCCAC 61.259 63.158 32.74 16.49 43.01 4.61
5146 6616 4.760047 GCGTCGTGGTGGCATCCT 62.760 66.667 0.00 0.00 0.00 3.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
14 15 4.693283 CTCCGGAAGTATATGCTTCAACA 58.307 43.478 27.88 13.80 44.81 3.33
16 17 3.388024 AGCTCCGGAAGTATATGCTTCAA 59.612 43.478 27.88 15.44 44.81 2.69
29 30 1.816863 GACTGGTGTGAGCTCCGGAA 61.817 60.000 12.15 0.00 37.89 4.30
34 35 0.459237 CATCGGACTGGTGTGAGCTC 60.459 60.000 6.82 6.82 0.00 4.09
38 39 1.591703 GCTCATCGGACTGGTGTGA 59.408 57.895 0.69 0.00 0.00 3.58
39 40 1.807165 CGCTCATCGGACTGGTGTG 60.807 63.158 0.00 0.00 33.78 3.82
40 41 2.573869 CGCTCATCGGACTGGTGT 59.426 61.111 0.00 0.00 33.78 4.16
77 78 1.002430 TCATAGCGGATCTCCATTGCC 59.998 52.381 0.00 0.00 35.14 4.52
92 93 3.726607 ACTAGTCTACGGTCGGTCATAG 58.273 50.000 0.00 0.00 0.00 2.23
94 95 2.093288 TGACTAGTCTACGGTCGGTCAT 60.093 50.000 23.01 0.00 33.21 3.06
95 96 1.276138 TGACTAGTCTACGGTCGGTCA 59.724 52.381 23.01 0.00 33.21 4.02
97 98 2.354259 CTTGACTAGTCTACGGTCGGT 58.646 52.381 23.01 0.00 33.21 4.69
129 131 1.555075 CCGACGGATATCCATTCCCAT 59.445 52.381 21.70 0.00 35.14 4.00
150 152 5.186409 AGGTAAAATTAGTCTACAGTCGGCA 59.814 40.000 0.00 0.00 0.00 5.69
224 227 8.178964 GCACGTGGAATTCATATAAACTAAACA 58.821 33.333 18.88 0.00 0.00 2.83
229 232 6.677920 GCAAGCACGTGGAATTCATATAAACT 60.678 38.462 18.88 0.00 0.00 2.66
271 275 7.858382 CGTACATTTCAACCATTGTTTGAACTA 59.142 33.333 8.68 0.00 30.42 2.24
287 291 0.785378 CGTTGTCCGCGTACATTTCA 59.215 50.000 5.02 0.00 0.00 2.69
288 292 3.555817 CGTTGTCCGCGTACATTTC 57.444 52.632 5.02 0.00 0.00 2.17
299 303 2.877691 GGCCATTCAGCGTTGTCC 59.122 61.111 0.00 0.00 0.00 4.02
310 314 1.224592 GACATGGGAGTCGGCCATT 59.775 57.895 2.24 0.00 0.00 3.16
314 318 3.771160 ACGGACATGGGAGTCGGC 61.771 66.667 0.00 0.00 41.07 5.54
330 353 2.173669 CGCATCCGTCCATGGACAC 61.174 63.158 37.42 22.08 44.77 3.67
336 359 1.043116 TTCCTCTCGCATCCGTCCAT 61.043 55.000 0.00 0.00 35.54 3.41
342 365 2.098117 CCACAAATTTCCTCTCGCATCC 59.902 50.000 0.00 0.00 0.00 3.51
349 372 2.884639 CGTTGACCCACAAATTTCCTCT 59.115 45.455 0.00 0.00 40.36 3.69
350 373 2.621526 ACGTTGACCCACAAATTTCCTC 59.378 45.455 0.00 0.00 40.36 3.71
353 376 4.035278 TCAACGTTGACCCACAAATTTC 57.965 40.909 26.53 0.00 40.36 2.17
354 377 4.158764 TCTTCAACGTTGACCCACAAATTT 59.841 37.500 29.74 0.00 40.36 1.82
360 383 1.069227 GCATCTTCAACGTTGACCCAC 60.069 52.381 29.74 14.77 36.83 4.61
366 389 1.872952 TGACCTGCATCTTCAACGTTG 59.127 47.619 22.35 22.35 0.00 4.10
368 391 1.344438 TCTGACCTGCATCTTCAACGT 59.656 47.619 0.00 0.00 0.00 3.99
380 403 2.201436 CTCGACCCACGTCTGACCTG 62.201 65.000 1.55 0.96 43.13 4.00
387 410 1.733399 GAACAGCTCGACCCACGTC 60.733 63.158 0.00 0.00 43.13 4.34
402 425 1.774639 TGCTCAGTTAACCGTCGAAC 58.225 50.000 0.88 0.00 0.00 3.95
421 444 7.273917 GAGCCTACATAAGGATGCATCCCTT 62.274 48.000 36.81 29.66 46.71 3.95
437 460 3.069586 CAGGTTGATATTCCGAGCCTACA 59.930 47.826 0.00 0.00 0.00 2.74
438 461 3.321111 TCAGGTTGATATTCCGAGCCTAC 59.679 47.826 0.00 0.00 0.00 3.18
439 462 3.572642 TCAGGTTGATATTCCGAGCCTA 58.427 45.455 0.00 0.00 0.00 3.93
440 463 2.398588 TCAGGTTGATATTCCGAGCCT 58.601 47.619 0.00 0.00 0.00 4.58
441 464 2.910688 TCAGGTTGATATTCCGAGCC 57.089 50.000 0.00 0.00 0.00 4.70
482 505 5.932619 AGCTTACAAAAGTCAGGGTTTTT 57.067 34.783 0.00 0.00 34.99 1.94
483 506 5.656859 AGAAGCTTACAAAAGTCAGGGTTTT 59.343 36.000 0.00 0.00 34.99 2.43
484 507 5.201243 AGAAGCTTACAAAAGTCAGGGTTT 58.799 37.500 0.00 0.00 34.99 3.27
485 508 4.793201 AGAAGCTTACAAAAGTCAGGGTT 58.207 39.130 0.00 0.00 34.99 4.11
486 509 4.439253 AGAAGCTTACAAAAGTCAGGGT 57.561 40.909 0.00 0.00 34.99 4.34
487 510 5.586643 GGATAGAAGCTTACAAAAGTCAGGG 59.413 44.000 0.00 0.00 34.99 4.45
488 511 6.410540 AGGATAGAAGCTTACAAAAGTCAGG 58.589 40.000 0.00 0.00 34.99 3.86
489 512 7.604164 TCAAGGATAGAAGCTTACAAAAGTCAG 59.396 37.037 0.00 0.00 34.99 3.51
490 513 7.387948 GTCAAGGATAGAAGCTTACAAAAGTCA 59.612 37.037 0.00 0.00 34.99 3.41
491 514 7.148390 GGTCAAGGATAGAAGCTTACAAAAGTC 60.148 40.741 0.00 0.00 34.99 3.01
492 515 6.655425 GGTCAAGGATAGAAGCTTACAAAAGT 59.345 38.462 0.00 0.00 34.99 2.66
493 516 6.655003 TGGTCAAGGATAGAAGCTTACAAAAG 59.345 38.462 0.00 0.00 35.68 2.27
494 517 6.539173 TGGTCAAGGATAGAAGCTTACAAAA 58.461 36.000 0.00 0.00 0.00 2.44
495 518 6.121776 TGGTCAAGGATAGAAGCTTACAAA 57.878 37.500 0.00 0.00 0.00 2.83
496 519 5.755409 TGGTCAAGGATAGAAGCTTACAA 57.245 39.130 0.00 0.00 0.00 2.41
497 520 5.425217 TCATGGTCAAGGATAGAAGCTTACA 59.575 40.000 0.00 0.00 0.00 2.41
498 521 5.918608 TCATGGTCAAGGATAGAAGCTTAC 58.081 41.667 0.00 0.00 0.00 2.34
499 522 6.239714 GGATCATGGTCAAGGATAGAAGCTTA 60.240 42.308 8.54 0.00 0.00 3.09
500 523 5.455899 GGATCATGGTCAAGGATAGAAGCTT 60.456 44.000 8.54 0.00 0.00 3.74
501 524 4.041444 GGATCATGGTCAAGGATAGAAGCT 59.959 45.833 8.54 0.00 0.00 3.74
502 525 4.322567 GGATCATGGTCAAGGATAGAAGC 58.677 47.826 8.54 0.00 0.00 3.86
516 539 1.414181 AGCTGTAGAACCGGATCATGG 59.586 52.381 9.46 0.00 0.00 3.66
522 545 0.613260 ATGCAAGCTGTAGAACCGGA 59.387 50.000 9.46 0.00 0.00 5.14
523 546 2.309528 TATGCAAGCTGTAGAACCGG 57.690 50.000 0.00 0.00 0.00 5.28
527 550 4.760530 AGGTCATATGCAAGCTGTAGAA 57.239 40.909 0.00 0.00 0.00 2.10
543 566 2.918934 TCCCATTCTCAATCCAAGGTCA 59.081 45.455 0.00 0.00 0.00 4.02
556 579 3.715315 TGCTTCTCATCATCTCCCATTCT 59.285 43.478 0.00 0.00 0.00 2.40
557 580 4.082665 TGCTTCTCATCATCTCCCATTC 57.917 45.455 0.00 0.00 0.00 2.67
562 585 6.205101 ACAATTTTGCTTCTCATCATCTCC 57.795 37.500 0.00 0.00 0.00 3.71
591 615 6.967767 ACGATGAAAGTCATTAGTCTCGTTAG 59.032 38.462 0.00 0.00 37.20 2.34
596 620 7.030165 TCTCAACGATGAAAGTCATTAGTCTC 58.970 38.462 0.00 0.00 37.20 3.36
615 639 5.118817 GGTCTTAGATGAACACGTTCTCAAC 59.881 44.000 11.01 0.00 40.14 3.18
621 645 5.995282 TGAAATGGTCTTAGATGAACACGTT 59.005 36.000 0.00 0.00 36.40 3.99
700 724 8.578308 TTTTCTTCAGCTATGTGTTGATTTTG 57.422 30.769 0.00 0.00 35.85 2.44
747 781 1.098050 ATGAATCTGAAAGCACGCCC 58.902 50.000 0.00 0.00 0.00 6.13
751 785 6.500910 TGCAATGATATGAATCTGAAAGCAC 58.499 36.000 0.00 0.00 32.93 4.40
757 791 7.002276 ACTTGGATGCAATGATATGAATCTGA 58.998 34.615 0.00 0.00 35.91 3.27
783 817 1.476074 CATGTGGTTTGCGTGTTGAC 58.524 50.000 0.00 0.00 0.00 3.18
798 834 3.416156 GAGGAGGTCTTTTTCAGCATGT 58.584 45.455 0.00 0.00 37.40 3.21
843 884 0.898575 GAACGAATTAAAGCGCACGC 59.101 50.000 11.47 6.99 42.33 5.34
1027 1073 4.116328 CGGCGAGAAGAGCGTGGA 62.116 66.667 0.00 0.00 35.00 4.02
1087 1133 4.796495 GCGCGGATTGAAGGGGGT 62.796 66.667 8.83 0.00 0.00 4.95
1119 1165 1.169577 GAGTGAGCGAAGACCAGAGA 58.830 55.000 0.00 0.00 0.00 3.10
1266 1312 2.420890 CCCTCGGAGATGAGCAGC 59.579 66.667 6.58 0.00 33.89 5.25
1374 1420 3.256631 GGACAGTAAACTAGTCCGGACAA 59.743 47.826 35.00 11.07 42.02 3.18
1475 1522 8.980596 AGATCTAGCAGGAATATTTATCAGAGG 58.019 37.037 0.00 0.00 0.00 3.69
1478 1525 9.806203 CTCAGATCTAGCAGGAATATTTATCAG 57.194 37.037 0.00 0.00 0.00 2.90
1483 1530 9.545928 AGATACTCAGATCTAGCAGGAATATTT 57.454 33.333 0.00 0.00 34.29 1.40
1529 1576 3.181470 ACAAAATGGCCTAACAACCACAC 60.181 43.478 3.32 0.00 39.19 3.82
1590 1640 8.553153 TCAACCACCACCTATGAATAGAAATAA 58.447 33.333 0.00 0.00 32.05 1.40
1632 1682 7.606839 ACTTTAAACTATGAAGCAAGGTAGGTC 59.393 37.037 0.00 0.00 0.00 3.85
1658 1708 8.017373 GCCGAACATATGTTACTCGTTATACTA 58.983 37.037 20.83 0.00 38.56 1.82
1659 1709 6.860023 GCCGAACATATGTTACTCGTTATACT 59.140 38.462 20.83 0.00 38.56 2.12
1660 1710 6.860023 AGCCGAACATATGTTACTCGTTATAC 59.140 38.462 20.83 4.08 38.56 1.47
1661 1711 6.973843 AGCCGAACATATGTTACTCGTTATA 58.026 36.000 20.83 0.00 38.56 0.98
1663 1713 5.252969 AGCCGAACATATGTTACTCGTTA 57.747 39.130 20.83 0.00 38.56 3.18
1665 1715 3.795623 AGCCGAACATATGTTACTCGT 57.204 42.857 20.83 3.73 38.56 4.18
1666 1716 3.863424 ACAAGCCGAACATATGTTACTCG 59.137 43.478 20.83 18.98 38.56 4.18
1667 1717 4.868171 TCACAAGCCGAACATATGTTACTC 59.132 41.667 20.83 12.07 38.56 2.59
1668 1718 4.827692 TCACAAGCCGAACATATGTTACT 58.172 39.130 20.83 15.07 38.56 2.24
1669 1719 5.734855 ATCACAAGCCGAACATATGTTAC 57.265 39.130 20.83 13.18 38.56 2.50
1670 1720 6.751514 AAATCACAAGCCGAACATATGTTA 57.248 33.333 20.83 2.84 38.56 2.41
1671 1721 5.643379 AAATCACAAGCCGAACATATGTT 57.357 34.783 20.93 20.93 41.64 2.71
1747 1797 2.217750 TGTCCTGAACCACAATTGACG 58.782 47.619 13.59 3.68 0.00 4.35
1765 1815 9.780186 GAGGGAGTAGTTGCTAATTAAATATGT 57.220 33.333 0.00 0.00 0.00 2.29
1785 1835 9.360093 CGCTCTTATATTAATTTACAGAGGGAG 57.640 37.037 20.74 5.24 40.49 4.30
1787 1837 9.490379 AACGCTCTTATATTAATTTACAGAGGG 57.510 33.333 21.96 21.96 42.53 4.30
1803 1853 9.953697 CTACTTTAGTGATCTAAACGCTCTTAT 57.046 33.333 0.00 0.00 40.05 1.73
1804 1854 8.404000 CCTACTTTAGTGATCTAAACGCTCTTA 58.596 37.037 0.00 0.00 40.05 2.10
1805 1855 7.093858 ACCTACTTTAGTGATCTAAACGCTCTT 60.094 37.037 0.00 0.00 40.05 2.85
1806 1856 6.377712 ACCTACTTTAGTGATCTAAACGCTCT 59.622 38.462 0.00 0.00 40.05 4.09
1807 1857 6.562518 ACCTACTTTAGTGATCTAAACGCTC 58.437 40.000 0.00 0.00 40.05 5.03
1808 1858 6.527057 ACCTACTTTAGTGATCTAAACGCT 57.473 37.500 0.00 0.00 40.05 5.07
1809 1859 6.255237 GGAACCTACTTTAGTGATCTAAACGC 59.745 42.308 0.00 0.00 40.05 4.84
1810 1860 7.488471 CAGGAACCTACTTTAGTGATCTAAACG 59.512 40.741 0.00 0.00 40.05 3.60
1811 1861 8.312564 ACAGGAACCTACTTTAGTGATCTAAAC 58.687 37.037 0.00 0.00 40.05 2.01
1812 1862 8.431910 ACAGGAACCTACTTTAGTGATCTAAA 57.568 34.615 0.00 0.00 41.87 1.85
1813 1863 8.311836 CAACAGGAACCTACTTTAGTGATCTAA 58.688 37.037 0.00 0.00 34.76 2.10
1814 1864 7.578955 GCAACAGGAACCTACTTTAGTGATCTA 60.579 40.741 0.00 0.00 0.00 1.98
1815 1865 6.702329 CAACAGGAACCTACTTTAGTGATCT 58.298 40.000 0.00 0.00 0.00 2.75
1816 1866 5.351740 GCAACAGGAACCTACTTTAGTGATC 59.648 44.000 0.00 0.00 0.00 2.92
1817 1867 5.246307 GCAACAGGAACCTACTTTAGTGAT 58.754 41.667 0.00 0.00 0.00 3.06
1818 1868 4.638304 GCAACAGGAACCTACTTTAGTGA 58.362 43.478 0.00 0.00 0.00 3.41
1819 1869 3.432252 CGCAACAGGAACCTACTTTAGTG 59.568 47.826 0.00 0.00 0.00 2.74
1820 1870 3.660865 CGCAACAGGAACCTACTTTAGT 58.339 45.455 0.00 0.00 0.00 2.24
1821 1871 2.415512 GCGCAACAGGAACCTACTTTAG 59.584 50.000 0.30 0.00 0.00 1.85
1822 1872 2.038033 AGCGCAACAGGAACCTACTTTA 59.962 45.455 11.47 0.00 0.00 1.85
1823 1873 1.202770 AGCGCAACAGGAACCTACTTT 60.203 47.619 11.47 0.00 0.00 2.66
1824 1874 0.396811 AGCGCAACAGGAACCTACTT 59.603 50.000 11.47 0.00 0.00 2.24
1825 1875 0.396811 AAGCGCAACAGGAACCTACT 59.603 50.000 11.47 0.00 0.00 2.57
1826 1876 1.069227 CAAAGCGCAACAGGAACCTAC 60.069 52.381 11.47 0.00 0.00 3.18
1827 1877 1.202710 TCAAAGCGCAACAGGAACCTA 60.203 47.619 11.47 0.00 0.00 3.08
1828 1878 0.465460 TCAAAGCGCAACAGGAACCT 60.465 50.000 11.47 0.00 0.00 3.50
1829 1879 0.317854 GTCAAAGCGCAACAGGAACC 60.318 55.000 11.47 0.00 0.00 3.62
1830 1880 0.663153 AGTCAAAGCGCAACAGGAAC 59.337 50.000 11.47 0.00 0.00 3.62
1831 1881 0.944386 GAGTCAAAGCGCAACAGGAA 59.056 50.000 11.47 0.00 0.00 3.36
1849 1899 3.767673 GGTCAGACTGTGGGTACATTAGA 59.232 47.826 1.59 0.00 35.97 2.10
1875 1925 5.930569 CGAGCTTCTGATGGATATTCAATCA 59.069 40.000 0.00 0.00 0.00 2.57
1907 1957 2.978156 AGGGCATGGAGTCAGAAAAA 57.022 45.000 0.00 0.00 0.00 1.94
1908 1958 2.978156 AAGGGCATGGAGTCAGAAAA 57.022 45.000 0.00 0.00 0.00 2.29
1909 1959 2.978156 AAAGGGCATGGAGTCAGAAA 57.022 45.000 0.00 0.00 0.00 2.52
1910 1960 2.108075 TGAAAAGGGCATGGAGTCAGAA 59.892 45.455 0.00 0.00 0.00 3.02
1911 1961 1.704628 TGAAAAGGGCATGGAGTCAGA 59.295 47.619 0.00 0.00 0.00 3.27
1952 2002 5.316167 TGCCATGTATGATGATTTCCCTAC 58.684 41.667 0.00 0.00 0.00 3.18
1962 2012 4.198530 TGTAGGTGTTGCCATGTATGATG 58.801 43.478 0.00 0.00 40.61 3.07
1969 2019 6.395426 AATCATAATGTAGGTGTTGCCATG 57.605 37.500 0.00 0.00 40.61 3.66
1996 2046 4.211584 CGAATCCAATGCATCTCTCTGAAG 59.788 45.833 0.00 0.00 0.00 3.02
1997 2047 4.124970 CGAATCCAATGCATCTCTCTGAA 58.875 43.478 0.00 0.00 0.00 3.02
1999 2049 2.223611 GCGAATCCAATGCATCTCTCTG 59.776 50.000 0.00 0.00 0.00 3.35
2062 2120 6.717413 TCTTGTTTTTCATGATTGCAAAAGC 58.283 32.000 1.71 0.00 30.34 3.51
2063 2121 8.133754 TCTCTTGTTTTTCATGATTGCAAAAG 57.866 30.769 1.71 0.00 30.34 2.27
2067 2125 6.160684 CCATCTCTTGTTTTTCATGATTGCA 58.839 36.000 0.00 0.00 31.42 4.08
2085 2143 0.540923 AGCTGACAGGAAGCCATCTC 59.459 55.000 4.26 0.00 41.82 2.75
2088 2146 1.378250 GCAGCTGACAGGAAGCCAT 60.378 57.895 20.43 0.00 41.82 4.40
2091 2149 0.604780 TTGAGCAGCTGACAGGAAGC 60.605 55.000 20.43 0.00 41.15 3.86
2092 2150 1.440708 CTTGAGCAGCTGACAGGAAG 58.559 55.000 20.43 7.40 0.00 3.46
2093 2151 0.604780 GCTTGAGCAGCTGACAGGAA 60.605 55.000 20.43 0.90 46.27 3.36
2119 2177 9.448587 ACTACTGGTCCCTTCTATATTTGTTAT 57.551 33.333 0.00 0.00 0.00 1.89
2127 2185 4.481280 ACCTGACTACTGGTCCCTTCTATA 59.519 45.833 0.00 0.00 43.20 1.31
2131 2189 1.939980 ACCTGACTACTGGTCCCTTC 58.060 55.000 0.00 0.00 43.20 3.46
2154 2212 6.010219 AGTAGGTGTGAAGCATTTGGTTAAT 58.990 36.000 0.00 0.00 35.69 1.40
2173 2231 7.827701 ACCACGATCATACATAATACAGTAGG 58.172 38.462 0.00 0.00 0.00 3.18
2194 2252 8.429641 TCTCCAGTTTCCAAATATCTATACCAC 58.570 37.037 0.00 0.00 0.00 4.16
2225 2283 5.924356 TCCAGCTCATTTTTACGGATGATA 58.076 37.500 0.00 0.00 32.31 2.15
2226 2284 4.780815 TCCAGCTCATTTTTACGGATGAT 58.219 39.130 0.00 0.00 32.31 2.45
2227 2285 4.214986 TCCAGCTCATTTTTACGGATGA 57.785 40.909 0.00 0.00 0.00 2.92
2232 2290 3.313526 CCAGGATCCAGCTCATTTTTACG 59.686 47.826 15.82 0.00 0.00 3.18
2288 2349 9.915564 AGAATTAGGTCTCCCCTATAGTTTATT 57.084 33.333 0.00 0.00 45.44 1.40
2310 2372 5.914033 ACAGTATACGCATGGTTGTAGAAT 58.086 37.500 0.00 0.00 0.00 2.40
2313 2375 6.091577 TCAAAACAGTATACGCATGGTTGTAG 59.908 38.462 0.00 0.00 0.00 2.74
2340 2402 4.468153 AGTCTAGGACTCCCAGATGTTTTC 59.532 45.833 0.00 0.00 38.71 2.29
2403 2465 5.182950 TCCTTGTATGTTGCAAATACCACTG 59.817 40.000 19.82 11.42 30.80 3.66
2432 2526 7.554118 CCCACTGACTCTTGTTCAATATGTAAT 59.446 37.037 0.00 0.00 0.00 1.89
2470 2565 9.597999 CAAAAGATGCAAATTTAAAACTTAGGC 57.402 29.630 0.00 0.00 0.00 3.93
2512 2607 8.015658 ACAATTTTACGCAGAAACTACAAGATC 58.984 33.333 0.00 0.00 0.00 2.75
2528 2623 6.139482 CGTGTGTGGAAGTTTACAATTTTACG 59.861 38.462 0.00 0.00 0.00 3.18
2534 2629 6.385649 AAATCGTGTGTGGAAGTTTACAAT 57.614 33.333 0.00 0.00 0.00 2.71
2560 2655 4.895297 AGGGCAGATTGTTTGAAAAGAGAA 59.105 37.500 0.00 0.00 0.00 2.87
2577 2672 6.647067 CGGTAAATATCTCTAGAAAAGGGCAG 59.353 42.308 0.00 0.00 0.00 4.85
2601 2696 8.101654 AGAGCCTCTACTAGACATAAATTACG 57.898 38.462 0.00 0.00 0.00 3.18
2609 2704 5.381184 TCAGAAGAGCCTCTACTAGACAT 57.619 43.478 0.00 0.00 0.00 3.06
2665 2760 5.642063 TCTGAATTGGCGGTAGAAAACTAAG 59.358 40.000 0.00 0.00 0.00 2.18
2669 2764 4.454504 TCTTCTGAATTGGCGGTAGAAAAC 59.545 41.667 0.00 0.00 0.00 2.43
2709 2804 4.324254 GGACATGAGGAAACCTATCCAACA 60.324 45.833 0.00 0.00 42.27 3.33
2728 2823 6.688922 GCTCTTGATTGTATATTCCAGGGACA 60.689 42.308 0.00 0.00 0.00 4.02
2749 2844 5.901413 TTTTCCATCCATCTATCTGCTCT 57.099 39.130 0.00 0.00 0.00 4.09
2815 2910 1.603802 CTGCCTACGTGCCATAATTGG 59.396 52.381 0.00 0.00 46.66 3.16
2852 2947 9.763465 GTGTTACCATTACACACATAAATACAC 57.237 33.333 0.00 0.00 44.08 2.90
2872 2967 5.398416 GCGGATTTCAAAGAAACTGTGTTAC 59.602 40.000 0.00 0.00 0.00 2.50
2877 2972 4.142271 TGTTGCGGATTTCAAAGAAACTGT 60.142 37.500 0.00 0.00 0.00 3.55
2879 2974 4.499696 CCTGTTGCGGATTTCAAAGAAACT 60.500 41.667 0.00 0.00 0.00 2.66
2896 2991 4.843984 CGATTGCGTTTAGTAAACCTGTTG 59.156 41.667 17.99 6.70 38.14 3.33
2924 3019 5.441718 TCTTCAAGGGCAACTGATAATCT 57.558 39.130 0.00 0.00 0.00 2.40
2971 3066 1.000506 CGTCCCGGAGTCTCAAGAAAA 59.999 52.381 0.73 0.00 0.00 2.29
2978 3073 0.179134 CAATCACGTCCCGGAGTCTC 60.179 60.000 0.73 0.00 0.00 3.36
3032 3127 6.708502 TGGTCTTCTATGTTTTGACGATTTCA 59.291 34.615 0.00 0.00 0.00 2.69
3038 3133 5.666969 TTGTGGTCTTCTATGTTTTGACG 57.333 39.130 0.00 0.00 0.00 4.35
3041 3136 5.816919 ACGTTTGTGGTCTTCTATGTTTTG 58.183 37.500 0.00 0.00 0.00 2.44
3057 3153 5.815740 AGAACACAAGAGTTATGACGTTTGT 59.184 36.000 6.87 6.87 37.55 2.83
3168 3273 5.972107 AGTCAAAATTGGAGAACAGATGG 57.028 39.130 0.00 0.00 0.00 3.51
3172 3277 8.571336 AGAACATTAGTCAAAATTGGAGAACAG 58.429 33.333 0.00 0.00 0.00 3.16
3184 3291 6.775142 TGGTGGATGAAAGAACATTAGTCAAA 59.225 34.615 0.00 0.00 0.00 2.69
3227 3334 1.869767 GTTGAGGATATTGGAGCAGCG 59.130 52.381 0.00 0.00 0.00 5.18
3371 3478 1.826327 CTTTGATGGCGTTTATGGCG 58.174 50.000 0.00 0.00 37.19 5.69
3404 3511 5.423015 TGCAAAGGTTTGTGAATTTAAGCA 58.577 33.333 4.45 0.00 40.24 3.91
3464 3571 7.492524 TCTCCATATCAGCTTACAACTTACAG 58.507 38.462 0.00 0.00 0.00 2.74
3498 3605 3.125376 GCCATCGAAGCCTGGGGAT 62.125 63.158 4.99 0.00 31.94 3.85
3507 3614 2.547211 GTGGATCTCAATGCCATCGAAG 59.453 50.000 0.00 0.00 33.66 3.79
3519 3626 2.426406 ATGAGCGCCGTGGATCTCA 61.426 57.895 2.29 11.26 39.54 3.27
3558 3665 1.546923 TCGTTTATGCCGTCCTTGAGA 59.453 47.619 0.00 0.00 0.00 3.27
3573 3680 1.736645 CTCATCGGTGCGGTCGTTT 60.737 57.895 0.00 0.00 0.00 3.60
3654 3761 2.125552 CGTTCTGCTCCGATGGCA 60.126 61.111 0.00 0.00 38.10 4.92
3669 3776 3.231736 ACCCTCACCGCAGTTCGT 61.232 61.111 0.00 0.00 36.19 3.85
3699 3806 0.319211 CGTAAGCGTCAAGGTGGTCA 60.319 55.000 0.00 0.00 0.00 4.02
3760 3867 2.743928 CTGCTGGAGGGCGTTGAC 60.744 66.667 0.00 0.00 34.52 3.18
3903 4010 0.618458 ACATGAACGTGCCCTGGTAT 59.382 50.000 0.00 0.00 0.00 2.73
4011 4118 3.296709 CTCGACCAGGTCCGGGTTG 62.297 68.421 19.80 19.80 39.19 3.77
4171 4278 7.040062 CCAAATACACTTCACAGTAAATCCCAA 60.040 37.037 0.00 0.00 0.00 4.12
4181 4288 8.454106 CCTTATTTCTCCAAATACACTTCACAG 58.546 37.037 0.00 0.00 34.73 3.66
4543 6006 8.303876 TCAGCCATTTTTAAAGTAGAAACCATC 58.696 33.333 0.00 0.00 0.00 3.51
4545 6008 7.068839 TGTCAGCCATTTTTAAAGTAGAAACCA 59.931 33.333 0.00 0.00 0.00 3.67
4558 6021 7.961325 ATAAAAATCGTTGTCAGCCATTTTT 57.039 28.000 17.21 17.21 39.10 1.94
4678 6148 1.659233 CCAAAGTGGCGTCATTGCA 59.341 52.632 0.00 0.00 36.28 4.08
4699 6169 4.034048 CCAACCATCAGTACGATAGCAAAC 59.966 45.833 0.00 0.00 42.67 2.93
4708 6178 0.245539 ACGTCCCAACCATCAGTACG 59.754 55.000 0.00 0.00 35.17 3.67
4743 6213 4.022849 GGCTAAGGCGCAAATTCATCTTAT 60.023 41.667 10.83 0.00 39.81 1.73
4744 6214 3.315191 GGCTAAGGCGCAAATTCATCTTA 59.685 43.478 10.83 3.99 39.81 2.10
4745 6215 2.099756 GGCTAAGGCGCAAATTCATCTT 59.900 45.455 10.83 2.84 39.81 2.40
4746 6216 1.678101 GGCTAAGGCGCAAATTCATCT 59.322 47.619 10.83 0.00 39.81 2.90
4747 6217 1.405105 TGGCTAAGGCGCAAATTCATC 59.595 47.619 10.83 0.00 39.81 2.92
4748 6218 1.473258 TGGCTAAGGCGCAAATTCAT 58.527 45.000 10.83 0.00 39.81 2.57
4749 6219 1.067915 GTTGGCTAAGGCGCAAATTCA 60.068 47.619 10.83 0.00 39.81 2.57
4750 6220 1.202348 AGTTGGCTAAGGCGCAAATTC 59.798 47.619 10.83 0.00 39.81 2.17
4751 6221 1.256812 AGTTGGCTAAGGCGCAAATT 58.743 45.000 10.83 3.00 39.81 1.82
4752 6222 2.122783 TAGTTGGCTAAGGCGCAAAT 57.877 45.000 10.83 0.00 39.81 2.32
4753 6223 2.014128 GATAGTTGGCTAAGGCGCAAA 58.986 47.619 10.83 0.00 39.81 3.68
4754 6224 1.209504 AGATAGTTGGCTAAGGCGCAA 59.790 47.619 10.83 0.00 39.81 4.85
4755 6225 0.830648 AGATAGTTGGCTAAGGCGCA 59.169 50.000 10.83 0.00 39.81 6.09
4756 6226 1.202533 TGAGATAGTTGGCTAAGGCGC 60.203 52.381 0.00 0.00 39.81 6.53
4757 6227 2.159099 TGTGAGATAGTTGGCTAAGGCG 60.159 50.000 0.00 0.00 39.81 5.52
4758 6228 3.543680 TGTGAGATAGTTGGCTAAGGC 57.456 47.619 0.00 0.00 37.82 4.35
4759 6229 5.163854 CGTTTTGTGAGATAGTTGGCTAAGG 60.164 44.000 0.00 0.00 0.00 2.69
4760 6230 5.637810 TCGTTTTGTGAGATAGTTGGCTAAG 59.362 40.000 0.00 0.00 0.00 2.18
4761 6231 5.543714 TCGTTTTGTGAGATAGTTGGCTAA 58.456 37.500 0.00 0.00 0.00 3.09
4762 6232 5.142061 TCGTTTTGTGAGATAGTTGGCTA 57.858 39.130 0.00 0.00 0.00 3.93
4763 6233 3.997021 CTCGTTTTGTGAGATAGTTGGCT 59.003 43.478 0.00 0.00 35.43 4.75
4764 6234 3.424962 GCTCGTTTTGTGAGATAGTTGGC 60.425 47.826 0.00 0.00 35.43 4.52
4765 6235 3.125316 GGCTCGTTTTGTGAGATAGTTGG 59.875 47.826 0.00 0.00 35.43 3.77
4766 6236 3.125316 GGGCTCGTTTTGTGAGATAGTTG 59.875 47.826 0.00 0.00 35.43 3.16
4767 6237 3.335579 GGGCTCGTTTTGTGAGATAGTT 58.664 45.455 0.00 0.00 35.43 2.24
4768 6238 2.674177 CGGGCTCGTTTTGTGAGATAGT 60.674 50.000 0.00 0.00 35.43 2.12
4769 6239 1.927174 CGGGCTCGTTTTGTGAGATAG 59.073 52.381 0.00 0.00 35.43 2.08
4770 6240 1.546923 TCGGGCTCGTTTTGTGAGATA 59.453 47.619 5.57 0.00 35.43 1.98
4771 6241 0.320374 TCGGGCTCGTTTTGTGAGAT 59.680 50.000 5.57 0.00 35.43 2.75
4772 6242 0.320374 ATCGGGCTCGTTTTGTGAGA 59.680 50.000 5.57 0.00 35.43 3.27
4773 6243 1.128692 GAATCGGGCTCGTTTTGTGAG 59.871 52.381 5.57 0.00 37.69 3.51
4774 6244 1.153353 GAATCGGGCTCGTTTTGTGA 58.847 50.000 5.57 0.00 37.69 3.58
4775 6245 0.168128 GGAATCGGGCTCGTTTTGTG 59.832 55.000 5.57 0.00 37.69 3.33
4776 6246 0.958876 GGGAATCGGGCTCGTTTTGT 60.959 55.000 5.57 0.00 37.69 2.83
4777 6247 1.654023 GGGGAATCGGGCTCGTTTTG 61.654 60.000 5.57 0.00 37.69 2.44
4778 6248 1.378119 GGGGAATCGGGCTCGTTTT 60.378 57.895 5.57 0.30 37.69 2.43
4779 6249 2.271173 GGGGAATCGGGCTCGTTT 59.729 61.111 5.57 3.12 37.69 3.60
4780 6250 3.793888 GGGGGAATCGGGCTCGTT 61.794 66.667 5.57 0.00 37.69 3.85
4799 6269 0.955428 TTTGTGAGATGGAGGCACGC 60.955 55.000 0.00 0.00 35.37 5.34
4800 6270 1.522668 TTTTGTGAGATGGAGGCACG 58.477 50.000 0.00 0.00 35.37 5.34
4819 6289 9.809096 GAGGTGAGAAAGATTTTCTTTTCTTTT 57.191 29.630 5.62 0.00 45.85 2.27
4820 6290 8.971073 TGAGGTGAGAAAGATTTTCTTTTCTTT 58.029 29.630 5.62 0.00 45.85 2.52
4821 6291 8.525290 TGAGGTGAGAAAGATTTTCTTTTCTT 57.475 30.769 5.62 0.00 45.85 2.52
4822 6292 8.409371 GTTGAGGTGAGAAAGATTTTCTTTTCT 58.591 33.333 5.62 0.68 45.85 2.52
4823 6293 7.649705 GGTTGAGGTGAGAAAGATTTTCTTTTC 59.350 37.037 5.62 5.14 45.85 2.29
4824 6294 7.124147 TGGTTGAGGTGAGAAAGATTTTCTTTT 59.876 33.333 5.62 0.00 45.85 2.27
4826 6296 6.129179 TGGTTGAGGTGAGAAAGATTTTCTT 58.871 36.000 5.62 0.00 38.59 2.52
4827 6297 5.694995 TGGTTGAGGTGAGAAAGATTTTCT 58.305 37.500 3.86 3.86 0.00 2.52
4828 6298 6.039829 AGTTGGTTGAGGTGAGAAAGATTTTC 59.960 38.462 0.00 0.00 0.00 2.29
4829 6299 5.893824 AGTTGGTTGAGGTGAGAAAGATTTT 59.106 36.000 0.00 0.00 0.00 1.82
4830 6300 5.449553 AGTTGGTTGAGGTGAGAAAGATTT 58.550 37.500 0.00 0.00 0.00 2.17
4831 6301 5.053978 AGTTGGTTGAGGTGAGAAAGATT 57.946 39.130 0.00 0.00 0.00 2.40
4832 6302 4.713792 AGTTGGTTGAGGTGAGAAAGAT 57.286 40.909 0.00 0.00 0.00 2.40
4833 6303 4.040461 CCTAGTTGGTTGAGGTGAGAAAGA 59.960 45.833 0.00 0.00 0.00 2.52
4834 6304 4.040461 TCCTAGTTGGTTGAGGTGAGAAAG 59.960 45.833 0.00 0.00 37.07 2.62
4835 6305 3.971305 TCCTAGTTGGTTGAGGTGAGAAA 59.029 43.478 0.00 0.00 37.07 2.52
4836 6306 3.578716 CTCCTAGTTGGTTGAGGTGAGAA 59.421 47.826 0.00 0.00 37.07 2.87
4837 6307 3.165875 CTCCTAGTTGGTTGAGGTGAGA 58.834 50.000 0.00 0.00 37.07 3.27
4838 6308 3.165875 TCTCCTAGTTGGTTGAGGTGAG 58.834 50.000 0.00 0.00 37.07 3.51
4839 6309 3.254093 TCTCCTAGTTGGTTGAGGTGA 57.746 47.619 0.00 0.00 37.07 4.02
4840 6310 3.515502 TCATCTCCTAGTTGGTTGAGGTG 59.484 47.826 0.00 0.00 37.32 4.00
4841 6311 3.515901 GTCATCTCCTAGTTGGTTGAGGT 59.484 47.826 0.00 0.00 37.07 3.85
4842 6312 3.515502 TGTCATCTCCTAGTTGGTTGAGG 59.484 47.826 0.00 0.00 37.07 3.86
4843 6313 4.808414 TGTCATCTCCTAGTTGGTTGAG 57.192 45.455 0.00 0.00 37.07 3.02
4844 6314 4.532126 ACATGTCATCTCCTAGTTGGTTGA 59.468 41.667 0.00 0.00 37.07 3.18
4845 6315 4.633126 CACATGTCATCTCCTAGTTGGTTG 59.367 45.833 0.00 0.00 37.07 3.77
4846 6316 4.323792 CCACATGTCATCTCCTAGTTGGTT 60.324 45.833 0.00 0.00 37.07 3.67
4847 6317 3.198635 CCACATGTCATCTCCTAGTTGGT 59.801 47.826 0.00 0.00 37.07 3.67
4848 6318 3.432749 CCCACATGTCATCTCCTAGTTGG 60.433 52.174 0.00 0.00 37.10 3.77
4849 6319 3.452264 TCCCACATGTCATCTCCTAGTTG 59.548 47.826 0.00 0.00 0.00 3.16
4850 6320 3.452627 GTCCCACATGTCATCTCCTAGTT 59.547 47.826 0.00 0.00 0.00 2.24
4851 6321 3.034635 GTCCCACATGTCATCTCCTAGT 58.965 50.000 0.00 0.00 0.00 2.57
4852 6322 2.366916 GGTCCCACATGTCATCTCCTAG 59.633 54.545 0.00 0.00 0.00 3.02
4853 6323 2.023015 AGGTCCCACATGTCATCTCCTA 60.023 50.000 0.00 0.00 0.00 2.94
4854 6324 1.207791 GGTCCCACATGTCATCTCCT 58.792 55.000 0.00 0.00 0.00 3.69
4855 6325 1.207791 AGGTCCCACATGTCATCTCC 58.792 55.000 0.00 0.00 0.00 3.71
4856 6326 3.197766 TGTAAGGTCCCACATGTCATCTC 59.802 47.826 0.00 0.00 0.00 2.75
4857 6327 3.181329 TGTAAGGTCCCACATGTCATCT 58.819 45.455 0.00 0.00 0.00 2.90
4858 6328 3.627395 TGTAAGGTCCCACATGTCATC 57.373 47.619 0.00 0.00 0.00 2.92
4859 6329 3.117888 GGATGTAAGGTCCCACATGTCAT 60.118 47.826 10.69 0.00 35.55 3.06
4860 6330 2.238646 GGATGTAAGGTCCCACATGTCA 59.761 50.000 10.69 0.00 35.55 3.58
4861 6331 2.238646 TGGATGTAAGGTCCCACATGTC 59.761 50.000 10.69 4.95 35.55 3.06
4862 6332 2.274542 TGGATGTAAGGTCCCACATGT 58.725 47.619 10.69 0.00 35.55 3.21
4863 6333 3.137176 AGATGGATGTAAGGTCCCACATG 59.863 47.826 10.69 0.00 35.55 3.21
4864 6334 3.397527 AGATGGATGTAAGGTCCCACAT 58.602 45.455 6.44 6.44 38.08 3.21
4865 6335 2.845659 AGATGGATGTAAGGTCCCACA 58.154 47.619 0.00 0.00 34.76 4.17
4866 6336 5.367945 TTTAGATGGATGTAAGGTCCCAC 57.632 43.478 0.00 0.00 34.76 4.61
4867 6337 6.395780 TTTTTAGATGGATGTAAGGTCCCA 57.604 37.500 0.00 0.00 34.76 4.37
4891 6361 9.803315 GTTCTTTTAAAATGGAAGTGAGTCTTT 57.197 29.630 0.09 0.00 36.40 2.52
4892 6362 8.966868 TGTTCTTTTAAAATGGAAGTGAGTCTT 58.033 29.630 0.09 0.00 39.32 3.01
4893 6363 8.519799 TGTTCTTTTAAAATGGAAGTGAGTCT 57.480 30.769 0.09 0.00 0.00 3.24
4894 6364 9.581099 TTTGTTCTTTTAAAATGGAAGTGAGTC 57.419 29.630 0.09 0.00 0.00 3.36
4895 6365 9.366216 GTTTGTTCTTTTAAAATGGAAGTGAGT 57.634 29.630 0.09 0.00 0.00 3.41
4896 6366 8.817100 GGTTTGTTCTTTTAAAATGGAAGTGAG 58.183 33.333 0.09 0.00 0.00 3.51
4897 6367 8.314751 TGGTTTGTTCTTTTAAAATGGAAGTGA 58.685 29.630 0.09 0.00 0.00 3.41
4898 6368 8.485976 TGGTTTGTTCTTTTAAAATGGAAGTG 57.514 30.769 0.09 0.00 0.00 3.16
4899 6369 9.508642 TTTGGTTTGTTCTTTTAAAATGGAAGT 57.491 25.926 0.09 0.00 0.00 3.01
4902 6372 9.508642 AGTTTTGGTTTGTTCTTTTAAAATGGA 57.491 25.926 0.09 0.00 0.00 3.41
4909 6379 9.765795 TGAGAAAAGTTTTGGTTTGTTCTTTTA 57.234 25.926 5.36 0.00 35.97 1.52
4910 6380 8.669946 TGAGAAAAGTTTTGGTTTGTTCTTTT 57.330 26.923 5.36 0.00 37.66 2.27
4911 6381 8.147704 TCTGAGAAAAGTTTTGGTTTGTTCTTT 58.852 29.630 5.36 0.00 0.00 2.52
4912 6382 7.666623 TCTGAGAAAAGTTTTGGTTTGTTCTT 58.333 30.769 5.36 0.00 0.00 2.52
4913 6383 7.227049 TCTGAGAAAAGTTTTGGTTTGTTCT 57.773 32.000 5.36 0.00 0.00 3.01
4914 6384 9.581099 TTATCTGAGAAAAGTTTTGGTTTGTTC 57.419 29.630 5.36 0.00 0.00 3.18
4915 6385 9.936759 TTTATCTGAGAAAAGTTTTGGTTTGTT 57.063 25.926 5.36 0.00 0.00 2.83
4916 6386 9.936759 TTTTATCTGAGAAAAGTTTTGGTTTGT 57.063 25.926 5.36 0.00 0.00 2.83
4940 6410 1.859302 TGGCTGTGGTGGAACTTTTT 58.141 45.000 0.00 0.00 36.74 1.94
4941 6411 1.480545 GTTGGCTGTGGTGGAACTTTT 59.519 47.619 0.00 0.00 36.74 2.27
4942 6412 1.111277 GTTGGCTGTGGTGGAACTTT 58.889 50.000 0.00 0.00 36.74 2.66
4943 6413 0.755327 GGTTGGCTGTGGTGGAACTT 60.755 55.000 0.00 0.00 36.74 2.66
4944 6414 1.152756 GGTTGGCTGTGGTGGAACT 60.153 57.895 0.00 0.00 36.74 3.01
4945 6415 1.454847 TGGTTGGCTGTGGTGGAAC 60.455 57.895 0.00 0.00 0.00 3.62
4946 6416 1.152777 CTGGTTGGCTGTGGTGGAA 60.153 57.895 0.00 0.00 0.00 3.53
4947 6417 2.515398 CTGGTTGGCTGTGGTGGA 59.485 61.111 0.00 0.00 0.00 4.02
4948 6418 3.297620 GCTGGTTGGCTGTGGTGG 61.298 66.667 0.00 0.00 0.00 4.61
4949 6419 2.519063 TGCTGGTTGGCTGTGGTG 60.519 61.111 0.00 0.00 0.00 4.17
4950 6420 2.203394 CTGCTGGTTGGCTGTGGT 60.203 61.111 0.00 0.00 0.00 4.16
4951 6421 2.987547 CCTGCTGGTTGGCTGTGG 60.988 66.667 0.51 0.00 0.00 4.17
4952 6422 2.203394 ACCTGCTGGTTGGCTGTG 60.203 61.111 9.88 0.00 46.05 3.66
4961 6431 2.182842 GCGCATAAGGACCTGCTGG 61.183 63.158 8.29 8.29 36.23 4.85
4962 6432 1.153289 AGCGCATAAGGACCTGCTG 60.153 57.895 11.47 1.29 36.23 4.41
4963 6433 1.144936 GAGCGCATAAGGACCTGCT 59.855 57.895 11.47 3.01 36.23 4.24
4964 6434 2.240500 CGAGCGCATAAGGACCTGC 61.241 63.158 11.47 0.00 35.02 4.85
4965 6435 0.460284 AACGAGCGCATAAGGACCTG 60.460 55.000 11.47 0.00 0.00 4.00
4966 6436 0.249398 AAACGAGCGCATAAGGACCT 59.751 50.000 11.47 0.00 0.00 3.85
4967 6437 0.651031 GAAACGAGCGCATAAGGACC 59.349 55.000 11.47 0.00 0.00 4.46
4968 6438 0.651031 GGAAACGAGCGCATAAGGAC 59.349 55.000 11.47 0.00 0.00 3.85
4969 6439 0.248012 TGGAAACGAGCGCATAAGGA 59.752 50.000 11.47 0.00 0.00 3.36
4970 6440 1.299541 ATGGAAACGAGCGCATAAGG 58.700 50.000 11.47 0.00 0.00 2.69
4971 6441 3.181511 TGAAATGGAAACGAGCGCATAAG 60.182 43.478 11.47 0.00 0.00 1.73
4972 6442 2.744741 TGAAATGGAAACGAGCGCATAA 59.255 40.909 11.47 0.00 0.00 1.90
4973 6443 2.351455 TGAAATGGAAACGAGCGCATA 58.649 42.857 11.47 0.00 0.00 3.14
4974 6444 1.164411 TGAAATGGAAACGAGCGCAT 58.836 45.000 11.47 0.00 0.00 4.73
4975 6445 0.947960 TTGAAATGGAAACGAGCGCA 59.052 45.000 11.47 0.00 0.00 6.09
4976 6446 1.978782 CTTTGAAATGGAAACGAGCGC 59.021 47.619 0.00 0.00 0.00 5.92
4977 6447 3.536158 TCTTTGAAATGGAAACGAGCG 57.464 42.857 0.00 0.00 0.00 5.03
4978 6448 6.582437 TTTTTCTTTGAAATGGAAACGAGC 57.418 33.333 0.00 0.00 0.00 5.03
5026 6496 9.016623 GCCTCAAACGTTTACCATTTATAATTC 57.983 33.333 14.20 0.00 0.00 2.17
5027 6497 7.977293 GGCCTCAAACGTTTACCATTTATAATT 59.023 33.333 14.20 0.00 0.00 1.40
5028 6498 7.485810 GGCCTCAAACGTTTACCATTTATAAT 58.514 34.615 14.20 0.00 0.00 1.28
5029 6499 6.403418 CGGCCTCAAACGTTTACCATTTATAA 60.403 38.462 14.20 0.00 0.00 0.98
5030 6500 5.064962 CGGCCTCAAACGTTTACCATTTATA 59.935 40.000 14.20 0.00 0.00 0.98
5031 6501 4.142556 CGGCCTCAAACGTTTACCATTTAT 60.143 41.667 14.20 0.00 0.00 1.40
5032 6502 3.188873 CGGCCTCAAACGTTTACCATTTA 59.811 43.478 14.20 0.00 0.00 1.40
5033 6503 2.030628 CGGCCTCAAACGTTTACCATTT 60.031 45.455 14.20 0.00 0.00 2.32
5034 6504 1.538075 CGGCCTCAAACGTTTACCATT 59.462 47.619 14.20 0.00 0.00 3.16
5035 6505 1.161843 CGGCCTCAAACGTTTACCAT 58.838 50.000 14.20 0.00 0.00 3.55
5036 6506 0.885596 CCGGCCTCAAACGTTTACCA 60.886 55.000 14.20 0.00 0.00 3.25
5037 6507 1.871077 CCGGCCTCAAACGTTTACC 59.129 57.895 14.20 11.66 0.00 2.85
5038 6508 1.208358 GCCGGCCTCAAACGTTTAC 59.792 57.895 18.11 3.73 0.00 2.01
5039 6509 2.319096 CGCCGGCCTCAAACGTTTA 61.319 57.895 23.46 1.84 0.00 2.01
5040 6510 3.656045 CGCCGGCCTCAAACGTTT 61.656 61.111 23.46 7.96 0.00 3.60
5065 6535 4.697756 TGACCGGCCCAAGCTTCG 62.698 66.667 0.00 0.00 39.73 3.79
5066 6536 3.056328 GTGACCGGCCCAAGCTTC 61.056 66.667 0.00 0.00 39.73 3.86
5078 6548 3.621892 AAGAGTACCGCGCGTGACC 62.622 63.158 29.95 17.71 0.00 4.02
5079 6549 2.126580 AAGAGTACCGCGCGTGAC 60.127 61.111 29.95 24.39 0.00 3.67
5080 6550 2.126618 CAAGAGTACCGCGCGTGA 60.127 61.111 29.95 13.40 0.00 4.35
5081 6551 3.838795 GCAAGAGTACCGCGCGTG 61.839 66.667 29.95 21.87 0.00 5.34
5084 6554 3.488090 GTGGCAAGAGTACCGCGC 61.488 66.667 0.00 0.00 0.00 6.86
5085 6555 1.805945 GAGTGGCAAGAGTACCGCG 60.806 63.158 0.00 0.00 41.45 6.46
5086 6556 1.448013 GGAGTGGCAAGAGTACCGC 60.448 63.158 0.00 0.00 36.68 5.68
5087 6557 0.108615 CAGGAGTGGCAAGAGTACCG 60.109 60.000 0.00 0.00 0.00 4.02
5088 6558 1.267121 TCAGGAGTGGCAAGAGTACC 58.733 55.000 0.00 0.00 0.00 3.34
5089 6559 3.491792 GCTATCAGGAGTGGCAAGAGTAC 60.492 52.174 0.00 0.00 0.00 2.73
5090 6560 2.695666 GCTATCAGGAGTGGCAAGAGTA 59.304 50.000 0.00 0.00 0.00 2.59
5091 6561 1.484240 GCTATCAGGAGTGGCAAGAGT 59.516 52.381 0.00 0.00 0.00 3.24
5092 6562 1.761784 AGCTATCAGGAGTGGCAAGAG 59.238 52.381 0.00 0.00 0.00 2.85
5093 6563 1.871418 AGCTATCAGGAGTGGCAAGA 58.129 50.000 0.00 0.00 0.00 3.02
5094 6564 2.706339 AAGCTATCAGGAGTGGCAAG 57.294 50.000 0.00 0.00 0.00 4.01
5095 6565 2.356125 GGAAAGCTATCAGGAGTGGCAA 60.356 50.000 0.00 0.00 0.00 4.52
5096 6566 1.210478 GGAAAGCTATCAGGAGTGGCA 59.790 52.381 0.00 0.00 0.00 4.92
5097 6567 1.210478 TGGAAAGCTATCAGGAGTGGC 59.790 52.381 0.00 0.00 0.00 5.01
5098 6568 2.739932 CGTGGAAAGCTATCAGGAGTGG 60.740 54.545 0.00 0.00 0.00 4.00
5099 6569 2.093973 ACGTGGAAAGCTATCAGGAGTG 60.094 50.000 9.50 0.00 0.00 3.51
5100 6570 2.093973 CACGTGGAAAGCTATCAGGAGT 60.094 50.000 7.95 0.00 0.00 3.85
5101 6571 2.544685 CACGTGGAAAGCTATCAGGAG 58.455 52.381 7.95 0.64 0.00 3.69
5102 6572 1.207089 CCACGTGGAAAGCTATCAGGA 59.793 52.381 31.31 0.00 37.39 3.86
5103 6573 1.066143 ACCACGTGGAAAGCTATCAGG 60.066 52.381 40.21 10.02 38.94 3.86
5104 6574 2.271800 GACCACGTGGAAAGCTATCAG 58.728 52.381 40.21 10.03 38.94 2.90
5105 6575 1.066430 GGACCACGTGGAAAGCTATCA 60.066 52.381 40.21 0.00 38.94 2.15
5106 6576 1.653151 GGACCACGTGGAAAGCTATC 58.347 55.000 40.21 24.00 38.94 2.08
5107 6577 0.252197 GGGACCACGTGGAAAGCTAT 59.748 55.000 40.21 16.93 38.94 2.97
5108 6578 1.122632 TGGGACCACGTGGAAAGCTA 61.123 55.000 40.21 17.70 38.94 3.32
5109 6579 2.430367 GGGACCACGTGGAAAGCT 59.570 61.111 40.21 18.59 38.94 3.74
5110 6580 2.112297 TGGGACCACGTGGAAAGC 59.888 61.111 40.21 23.69 38.94 3.51
5111 6581 4.058797 GTGGGACCACGTGGAAAG 57.941 61.111 40.21 14.92 37.19 2.62
5129 6599 4.760047 AGGATGCCACCACGACGC 62.760 66.667 0.00 0.00 0.00 5.19


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.