Multiple sequence alignment - TraesCS7B01G311000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G311000 chr7B 100.000 5107 0 0 1 5107 556466715 556461609 0.000000e+00 9431.0
1 TraesCS7B01G311000 chr7B 100.000 3119 0 0 5330 8448 556461386 556458268 0.000000e+00 5760.0
2 TraesCS7B01G311000 chr7B 93.506 154 7 3 6205 6356 270877005 270876853 8.530000e-55 226.0
3 TraesCS7B01G311000 chr7A 93.300 4373 216 43 748 5107 602813537 602809229 0.000000e+00 6381.0
4 TraesCS7B01G311000 chr7A 91.964 896 37 8 5330 6216 602809189 602808320 0.000000e+00 1223.0
5 TraesCS7B01G311000 chr7A 87.575 837 56 21 6956 7752 602807607 602806779 0.000000e+00 926.0
6 TraesCS7B01G311000 chr7A 93.161 541 21 4 7917 8448 602806635 602806102 0.000000e+00 780.0
7 TraesCS7B01G311000 chr7A 93.933 445 21 4 6517 6956 602808174 602807731 0.000000e+00 667.0
8 TraesCS7B01G311000 chr7A 80.439 547 74 17 112 654 640552948 640553465 3.700000e-103 387.0
9 TraesCS7B01G311000 chr7A 97.531 162 4 0 6338 6499 602808323 602808162 2.320000e-70 278.0
10 TraesCS7B01G311000 chr7A 87.302 63 7 1 686 748 724322401 724322462 4.230000e-08 71.3
11 TraesCS7B01G311000 chr7D 91.122 4348 275 58 795 5107 522517372 522513101 0.000000e+00 5788.0
12 TraesCS7B01G311000 chr7D 90.745 832 46 10 5330 6148 522513061 522512248 0.000000e+00 1081.0
13 TraesCS7B01G311000 chr7D 87.855 774 35 19 7709 8448 522504697 522503949 0.000000e+00 854.0
14 TraesCS7B01G311000 chr7D 89.934 457 27 7 6517 6956 522510932 522510478 9.510000e-159 571.0
15 TraesCS7B01G311000 chr7D 92.162 370 22 5 6955 7319 522510313 522509946 4.520000e-142 516.0
16 TraesCS7B01G311000 chr7D 94.444 162 9 0 7342 7503 522505395 522505234 5.060000e-62 250.0
17 TraesCS7B01G311000 chr7D 83.838 198 17 7 7525 7707 522505059 522504862 3.130000e-39 174.0
18 TraesCS7B01G311000 chr4B 83.724 725 90 19 39 748 576749347 576748636 0.000000e+00 660.0
19 TraesCS7B01G311000 chr4B 81.022 685 89 28 88 748 47625313 47625980 2.720000e-139 507.0
20 TraesCS7B01G311000 chr4B 98.496 133 2 0 6211 6343 576982570 576982438 1.420000e-57 235.0
21 TraesCS7B01G311000 chr1B 83.745 689 91 14 72 748 405970394 405971073 4.300000e-177 632.0
22 TraesCS7B01G311000 chr1B 81.395 172 30 2 1108 1278 599514642 599514472 1.140000e-28 139.0
23 TraesCS7B01G311000 chr6D 83.333 708 90 18 63 748 377837432 377836731 5.570000e-176 628.0
24 TraesCS7B01G311000 chr6D 85.691 601 63 16 64 653 422634668 422634080 5.610000e-171 612.0
25 TraesCS7B01G311000 chr3B 84.494 632 80 14 63 687 683390475 683389855 7.250000e-170 608.0
26 TraesCS7B01G311000 chr3B 96.377 138 4 1 6208 6345 564381522 564381386 8.530000e-55 226.0
27 TraesCS7B01G311000 chr3B 82.812 192 28 4 560 748 78518609 78518798 5.250000e-37 167.0
28 TraesCS7B01G311000 chr4D 84.554 628 76 15 64 683 91230847 91230233 3.370000e-168 603.0
29 TraesCS7B01G311000 chr4A 84.566 622 78 15 64 676 29182112 29181500 1.210000e-167 601.0
30 TraesCS7B01G311000 chr4A 97.080 137 4 0 6204 6340 477881747 477881883 1.830000e-56 231.0
31 TraesCS7B01G311000 chr5B 84.202 633 79 18 64 687 604174054 604173434 5.650000e-166 595.0
32 TraesCS7B01G311000 chr5B 82.514 692 85 28 14 687 711938422 711939095 7.350000e-160 575.0
33 TraesCS7B01G311000 chr5B 92.357 157 8 4 6189 6343 233969178 233969332 3.970000e-53 220.0
34 TraesCS7B01G311000 chr6A 80.663 724 79 39 64 748 71530404 71531105 9.790000e-139 505.0
35 TraesCS7B01G311000 chr6A 85.768 267 32 5 8183 8445 5861556 5861820 2.320000e-70 278.0
36 TraesCS7B01G311000 chr6A 89.167 120 10 1 7601 7717 573531034 573530915 6.830000e-31 147.0
37 TraesCS7B01G311000 chr5A 78.788 792 104 38 10 748 34752772 34753552 2.760000e-129 473.0
38 TraesCS7B01G311000 chr5A 94.595 37 2 0 712 748 472113843 472113807 3.290000e-04 58.4
39 TraesCS7B01G311000 chr6B 86.142 267 31 5 8183 8445 11574687 11574951 4.990000e-72 283.0
40 TraesCS7B01G311000 chr5D 99.231 130 1 0 6213 6342 179062935 179063064 1.420000e-57 235.0
41 TraesCS7B01G311000 chr3D 98.496 133 2 0 6213 6345 67064911 67064779 1.420000e-57 235.0
42 TraesCS7B01G311000 chr3D 78.378 222 36 9 538 748 476318506 476318286 5.320000e-27 134.0
43 TraesCS7B01G311000 chr3A 95.775 142 6 0 6202 6343 712147603 712147462 6.600000e-56 230.0
44 TraesCS7B01G311000 chr2B 95.745 141 6 0 6213 6353 800544910 800545050 2.370000e-55 228.0
45 TraesCS7B01G311000 chr2B 88.312 77 9 0 8298 8374 792677574 792677650 9.030000e-15 93.5
46 TraesCS7B01G311000 chr1D 82.500 160 26 2 1120 1278 441309165 441309007 1.140000e-28 139.0
47 TraesCS7B01G311000 chr1A 89.320 103 11 0 1175 1277 536652640 536652742 6.880000e-26 130.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G311000 chr7B 556458268 556466715 8447 True 7595.500000 9431 100.000000 1 8448 2 chr7B.!!$R2 8447
1 TraesCS7B01G311000 chr7A 602806102 602813537 7435 True 1709.166667 6381 92.910667 748 8448 6 chr7A.!!$R1 7700
2 TraesCS7B01G311000 chr7A 640552948 640553465 517 False 387.000000 387 80.439000 112 654 1 chr7A.!!$F1 542
3 TraesCS7B01G311000 chr7D 522509946 522517372 7426 True 1989.000000 5788 90.990750 795 7319 4 chr7D.!!$R2 6524
4 TraesCS7B01G311000 chr7D 522503949 522505395 1446 True 426.000000 854 88.712333 7342 8448 3 chr7D.!!$R1 1106
5 TraesCS7B01G311000 chr4B 576748636 576749347 711 True 660.000000 660 83.724000 39 748 1 chr4B.!!$R1 709
6 TraesCS7B01G311000 chr4B 47625313 47625980 667 False 507.000000 507 81.022000 88 748 1 chr4B.!!$F1 660
7 TraesCS7B01G311000 chr1B 405970394 405971073 679 False 632.000000 632 83.745000 72 748 1 chr1B.!!$F1 676
8 TraesCS7B01G311000 chr6D 377836731 377837432 701 True 628.000000 628 83.333000 63 748 1 chr6D.!!$R1 685
9 TraesCS7B01G311000 chr6D 422634080 422634668 588 True 612.000000 612 85.691000 64 653 1 chr6D.!!$R2 589
10 TraesCS7B01G311000 chr3B 683389855 683390475 620 True 608.000000 608 84.494000 63 687 1 chr3B.!!$R2 624
11 TraesCS7B01G311000 chr4D 91230233 91230847 614 True 603.000000 603 84.554000 64 683 1 chr4D.!!$R1 619
12 TraesCS7B01G311000 chr4A 29181500 29182112 612 True 601.000000 601 84.566000 64 676 1 chr4A.!!$R1 612
13 TraesCS7B01G311000 chr5B 604173434 604174054 620 True 595.000000 595 84.202000 64 687 1 chr5B.!!$R1 623
14 TraesCS7B01G311000 chr5B 711938422 711939095 673 False 575.000000 575 82.514000 14 687 1 chr5B.!!$F2 673
15 TraesCS7B01G311000 chr6A 71530404 71531105 701 False 505.000000 505 80.663000 64 748 1 chr6A.!!$F2 684
16 TraesCS7B01G311000 chr5A 34752772 34753552 780 False 473.000000 473 78.788000 10 748 1 chr5A.!!$F1 738

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
700 818 0.168128 GCACATACCACTTCGCAACC 59.832 55.000 0.00 0.00 0.00 3.77 F
1300 1428 0.037139 CCCGTGACGATACCAAACCA 60.037 55.000 6.54 0.00 0.00 3.67 F
1628 1775 0.109272 CGCTCGATACACTGTGTGGT 60.109 55.000 22.97 11.60 37.94 4.16 F
3062 3223 1.119684 TGCACGCTATCAGGTATGGT 58.880 50.000 0.00 0.00 0.00 3.55 F
4427 4602 0.739462 TAACCGGACATTGCGAGCTG 60.739 55.000 9.46 0.00 30.86 4.24 F
5386 5568 0.733729 AAGCCGTAGAGACACTAGCG 59.266 55.000 0.00 0.00 30.70 4.26 F
5387 5569 1.096386 AGCCGTAGAGACACTAGCGG 61.096 60.000 12.87 12.87 42.62 5.52 F
6226 7517 1.135170 GTCTTTTACTCCCTCCGTCCG 60.135 57.143 0.00 0.00 0.00 4.79 F
6335 7626 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20 F
6738 8038 0.174845 TGAAGATCGGCGGTAAGGTG 59.825 55.000 7.21 0.00 0.00 4.00 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1946 2093 0.606604 TGTAGCCAAGACCGGAACTC 59.393 55.0 9.46 0.00 0.00 3.01 R
3149 3317 2.092968 TCAGGGGACTATGCAACATGAC 60.093 50.0 0.00 0.00 40.21 3.06 R
3499 3670 1.871080 AGGGCGATTTAGCTTCATCG 58.129 50.0 18.35 18.35 44.24 3.84 R
5047 5227 0.320771 GGAGTGCACGAGTTGGTCAT 60.321 55.0 12.01 0.00 0.00 3.06 R
6316 7607 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.0 5.23 0.00 44.66 2.12 R
6318 7609 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.0 5.23 0.00 44.66 1.40 R
6323 7614 0.107017 TAAGTACTCCCTCCGTCCGG 60.107 60.0 0.00 0.00 0.00 5.14 R
7029 8532 0.392998 CTTTGGCCCGACACTGCTAT 60.393 55.0 0.00 0.00 0.00 2.97 R
7251 8765 0.394352 CAAGGCCCTGTATGGTGGTC 60.394 60.0 0.00 0.00 0.00 4.02 R
7912 9874 0.456221 CCACAGGACCAGTAGTAGCG 59.544 60.0 0.00 0.00 0.00 4.26 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
84 96 4.201881 CGTTTCTTTTCTTTCACGGGAGTT 60.202 41.667 0.00 0.00 44.67 3.01
103 115 4.134563 AGTTACGGTTTTGCTTCTGTGAT 58.865 39.130 0.00 0.00 0.00 3.06
239 313 3.517296 TGGTTATGCCTCTTGGAAACA 57.483 42.857 0.00 0.00 38.35 2.83
403 498 1.141053 AGAGTCACGGTTTTGCTTCCT 59.859 47.619 0.00 0.00 0.00 3.36
404 499 1.531578 GAGTCACGGTTTTGCTTCCTC 59.468 52.381 0.00 0.00 0.00 3.71
405 500 0.591659 GTCACGGTTTTGCTTCCTCC 59.408 55.000 0.00 0.00 0.00 4.30
406 501 0.181587 TCACGGTTTTGCTTCCTCCA 59.818 50.000 0.00 0.00 0.00 3.86
461 556 1.512156 GGCGTGCCTCTTTCGGAAAA 61.512 55.000 2.98 0.00 0.00 2.29
484 580 2.934886 AAAAACCCGTGCTACCAGTA 57.065 45.000 0.00 0.00 0.00 2.74
564 679 6.183360 GGGATCTAGTTTTGAAGATCTCGACT 60.183 42.308 11.05 0.00 37.77 4.18
568 683 7.658261 TCTAGTTTTGAAGATCTCGACTCAAA 58.342 34.615 13.77 13.77 0.00 2.69
580 695 4.020218 TCTCGACTCAAAGAATCCAATGGT 60.020 41.667 0.00 0.00 0.00 3.55
616 732 6.035650 TCGAGATTTAGACGCATGGTTTAAAG 59.964 38.462 12.33 3.93 38.24 1.85
687 805 1.802069 TGCAACAAGTAGCGCACATA 58.198 45.000 11.47 0.00 0.00 2.29
689 807 1.202031 GCAACAAGTAGCGCACATACC 60.202 52.381 11.47 0.00 0.00 2.73
690 808 2.073056 CAACAAGTAGCGCACATACCA 58.927 47.619 11.47 0.00 0.00 3.25
694 812 2.295253 AGTAGCGCACATACCACTTC 57.705 50.000 11.47 0.00 0.00 3.01
698 816 1.906994 GCGCACATACCACTTCGCAA 61.907 55.000 0.30 0.00 41.84 4.85
699 817 0.179225 CGCACATACCACTTCGCAAC 60.179 55.000 0.00 0.00 0.00 4.17
700 818 0.168128 GCACATACCACTTCGCAACC 59.832 55.000 0.00 0.00 0.00 3.77
701 819 1.808411 CACATACCACTTCGCAACCT 58.192 50.000 0.00 0.00 0.00 3.50
702 820 2.933492 GCACATACCACTTCGCAACCTA 60.933 50.000 0.00 0.00 0.00 3.08
703 821 3.331150 CACATACCACTTCGCAACCTAA 58.669 45.455 0.00 0.00 0.00 2.69
704 822 3.749088 CACATACCACTTCGCAACCTAAA 59.251 43.478 0.00 0.00 0.00 1.85
705 823 4.000988 ACATACCACTTCGCAACCTAAAG 58.999 43.478 0.00 0.00 0.00 1.85
707 825 2.767505 ACCACTTCGCAACCTAAAGAG 58.232 47.619 0.00 0.00 0.00 2.85
754 881 9.152595 GAATACTCCTTAACTAGTGAAAACCTG 57.847 37.037 0.00 0.00 0.00 4.00
765 892 1.202806 TGAAAACCTGTCAGGCTCCAG 60.203 52.381 19.40 4.13 39.63 3.86
770 897 0.321122 CCTGTCAGGCTCCAGTTCAC 60.321 60.000 5.79 0.00 0.00 3.18
771 898 0.321122 CTGTCAGGCTCCAGTTCACC 60.321 60.000 3.13 0.00 0.00 4.02
773 900 0.326264 GTCAGGCTCCAGTTCACCAT 59.674 55.000 0.00 0.00 0.00 3.55
774 901 1.067295 TCAGGCTCCAGTTCACCATT 58.933 50.000 0.00 0.00 0.00 3.16
775 902 2.027192 GTCAGGCTCCAGTTCACCATTA 60.027 50.000 0.00 0.00 0.00 1.90
776 903 2.237143 TCAGGCTCCAGTTCACCATTAG 59.763 50.000 0.00 0.00 0.00 1.73
777 904 1.065126 AGGCTCCAGTTCACCATTAGC 60.065 52.381 0.00 0.00 0.00 3.09
798 925 1.078426 AGCCTGAATACCGCGCTTT 60.078 52.632 5.56 0.00 0.00 3.51
799 926 0.676782 AGCCTGAATACCGCGCTTTT 60.677 50.000 5.56 0.00 0.00 2.27
835 962 2.366916 AGTCCTAATCGAATCAGCCCAG 59.633 50.000 0.00 0.00 0.00 4.45
880 1008 3.443588 GGCGTGGCCCATATTTCC 58.556 61.111 0.00 0.00 44.06 3.13
966 1094 0.905337 CGTCTTCCCCTCCCTTCAGT 60.905 60.000 0.00 0.00 0.00 3.41
988 1116 0.600057 GTCAAAGCTCAAAGGCCAGG 59.400 55.000 5.01 0.00 0.00 4.45
989 1117 0.540365 TCAAAGCTCAAAGGCCAGGG 60.540 55.000 5.01 0.00 0.00 4.45
990 1118 0.829182 CAAAGCTCAAAGGCCAGGGT 60.829 55.000 5.01 0.00 0.00 4.34
1006 1134 2.117206 GTGTGGGTGGAATGGGCA 59.883 61.111 0.00 0.00 0.00 5.36
1007 1135 1.305213 GTGTGGGTGGAATGGGCAT 60.305 57.895 0.00 0.00 0.00 4.40
1008 1136 1.305129 TGTGGGTGGAATGGGCATG 60.305 57.895 0.00 0.00 0.00 4.06
1009 1137 1.000233 GTGGGTGGAATGGGCATGA 60.000 57.895 0.00 0.00 0.00 3.07
1011 1139 2.129785 GGGTGGAATGGGCATGAGC 61.130 63.158 0.00 0.00 41.10 4.26
1014 1142 2.192979 GGAATGGGCATGAGCGGA 59.807 61.111 0.00 0.00 43.41 5.54
1015 1143 2.189499 GGAATGGGCATGAGCGGAC 61.189 63.158 0.00 0.00 43.41 4.79
1016 1144 2.514592 AATGGGCATGAGCGGACG 60.515 61.111 0.00 0.00 43.41 4.79
1080 1208 4.851214 GCGCCTCTCCTCCTCCCT 62.851 72.222 0.00 0.00 0.00 4.20
1280 1408 0.741221 GGCTTCAGCGTCCTGGTAAG 60.741 60.000 0.00 0.00 43.26 2.34
1281 1409 1.362406 GCTTCAGCGTCCTGGTAAGC 61.362 60.000 0.00 0.00 39.89 3.09
1284 1412 3.771160 AGCGTCCTGGTAAGCCCG 61.771 66.667 0.00 0.00 35.15 6.13
1285 1413 4.078516 GCGTCCTGGTAAGCCCGT 62.079 66.667 0.00 0.00 35.15 5.28
1286 1414 2.125673 CGTCCTGGTAAGCCCGTG 60.126 66.667 0.00 0.00 35.15 4.94
1287 1415 2.642254 CGTCCTGGTAAGCCCGTGA 61.642 63.158 0.00 0.00 35.15 4.35
1288 1416 1.079336 GTCCTGGTAAGCCCGTGAC 60.079 63.158 0.00 0.00 35.15 3.67
1289 1417 2.125673 CCTGGTAAGCCCGTGACG 60.126 66.667 0.00 0.00 35.15 4.35
1290 1418 2.642254 CCTGGTAAGCCCGTGACGA 61.642 63.158 6.54 0.00 35.15 4.20
1291 1419 1.515954 CTGGTAAGCCCGTGACGAT 59.484 57.895 6.54 0.00 35.15 3.73
1292 1420 0.742505 CTGGTAAGCCCGTGACGATA 59.257 55.000 6.54 0.00 35.15 2.92
1293 1421 0.457035 TGGTAAGCCCGTGACGATAC 59.543 55.000 6.54 4.22 35.15 2.24
1294 1422 0.249197 GGTAAGCCCGTGACGATACC 60.249 60.000 6.54 9.74 0.00 2.73
1295 1423 0.457035 GTAAGCCCGTGACGATACCA 59.543 55.000 6.54 0.00 0.00 3.25
1296 1424 1.135024 GTAAGCCCGTGACGATACCAA 60.135 52.381 6.54 0.00 0.00 3.67
1297 1425 0.322322 AAGCCCGTGACGATACCAAA 59.678 50.000 6.54 0.00 0.00 3.28
1298 1426 0.390735 AGCCCGTGACGATACCAAAC 60.391 55.000 6.54 0.00 0.00 2.93
1299 1427 1.363885 GCCCGTGACGATACCAAACC 61.364 60.000 6.54 0.00 0.00 3.27
1300 1428 0.037139 CCCGTGACGATACCAAACCA 60.037 55.000 6.54 0.00 0.00 3.67
1301 1429 1.608542 CCCGTGACGATACCAAACCAA 60.609 52.381 6.54 0.00 0.00 3.67
1302 1430 1.730064 CCGTGACGATACCAAACCAAG 59.270 52.381 6.54 0.00 0.00 3.61
1303 1431 1.127951 CGTGACGATACCAAACCAAGC 59.872 52.381 0.00 0.00 0.00 4.01
1304 1432 1.467342 GTGACGATACCAAACCAAGCC 59.533 52.381 0.00 0.00 0.00 4.35
1305 1433 1.349688 TGACGATACCAAACCAAGCCT 59.650 47.619 0.00 0.00 0.00 4.58
1317 1445 1.298859 CCAAGCCTCGTGTTGCTACC 61.299 60.000 0.00 0.00 36.66 3.18
1329 1457 3.556817 TGCTACCTGTGAAGCATGG 57.443 52.632 0.00 0.00 43.56 3.66
1330 1458 0.983467 TGCTACCTGTGAAGCATGGA 59.017 50.000 0.00 0.00 43.56 3.41
1372 1516 4.377839 TGAAGGAAGAGCGAGTTGATAG 57.622 45.455 0.00 0.00 0.00 2.08
1373 1517 3.764434 TGAAGGAAGAGCGAGTTGATAGT 59.236 43.478 0.00 0.00 0.00 2.12
1382 1526 5.292101 AGAGCGAGTTGATAGTAAATGCAAC 59.708 40.000 0.00 0.00 40.54 4.17
1390 1534 0.165944 AGTAAATGCAACGCGAGCAC 59.834 50.000 27.24 17.08 45.95 4.40
1392 1536 1.917782 TAAATGCAACGCGAGCACCC 61.918 55.000 27.24 5.31 45.95 4.61
1397 1541 4.681978 AACGCGAGCACCCAGGAC 62.682 66.667 15.93 0.00 0.00 3.85
1399 1543 4.803426 CGCGAGCACCCAGGACTC 62.803 72.222 0.00 0.00 0.00 3.36
1402 1546 2.680352 GAGCACCCAGGACTCGGA 60.680 66.667 0.00 0.00 0.00 4.55
1403 1547 2.681778 AGCACCCAGGACTCGGAG 60.682 66.667 2.83 2.83 0.00 4.63
1404 1548 4.459089 GCACCCAGGACTCGGAGC 62.459 72.222 4.58 0.00 0.00 4.70
1405 1549 2.681778 CACCCAGGACTCGGAGCT 60.682 66.667 4.58 0.00 0.00 4.09
1406 1550 1.379977 CACCCAGGACTCGGAGCTA 60.380 63.158 4.58 0.00 0.00 3.32
1407 1551 1.380112 ACCCAGGACTCGGAGCTAC 60.380 63.158 4.58 0.00 0.00 3.58
1408 1552 1.076632 CCCAGGACTCGGAGCTACT 60.077 63.158 4.58 0.00 0.00 2.57
1409 1553 0.183014 CCCAGGACTCGGAGCTACTA 59.817 60.000 4.58 0.00 0.00 1.82
1410 1554 1.600023 CCAGGACTCGGAGCTACTAG 58.400 60.000 4.58 0.00 0.00 2.57
1413 1557 1.418637 AGGACTCGGAGCTACTAGAGG 59.581 57.143 4.11 0.00 35.22 3.69
1421 1565 6.039605 ACTCGGAGCTACTAGAGGTTTTAATC 59.960 42.308 4.11 0.00 35.50 1.75
1426 1570 7.658167 GGAGCTACTAGAGGTTTTAATCCATTC 59.342 40.741 0.00 0.00 35.50 2.67
1428 1572 9.435570 AGCTACTAGAGGTTTTAATCCATTCTA 57.564 33.333 0.00 0.00 29.01 2.10
1444 1588 9.430399 AATCCATTCTAAGGAAAATCATCACAT 57.570 29.630 0.00 0.00 38.93 3.21
1449 1593 9.927081 ATTCTAAGGAAAATCATCACATAAGGT 57.073 29.630 0.00 0.00 34.90 3.50
1454 1601 6.995091 AGGAAAATCATCACATAAGGTAGCTC 59.005 38.462 0.00 0.00 0.00 4.09
1459 1606 6.976934 TCATCACATAAGGTAGCTCATGTA 57.023 37.500 10.38 1.00 30.66 2.29
1462 1609 6.791867 TCACATAAGGTAGCTCATGTAACT 57.208 37.500 10.38 0.00 30.66 2.24
1467 1614 5.677319 AAGGTAGCTCATGTAACTAGCAA 57.323 39.130 17.43 0.00 38.75 3.91
1471 1618 3.529533 AGCTCATGTAACTAGCAAGCAG 58.470 45.455 6.17 0.00 38.75 4.24
1472 1619 2.031437 GCTCATGTAACTAGCAAGCAGC 59.969 50.000 0.00 0.00 46.19 5.25
1482 1629 3.174790 GCAAGCAGCAAACAGTCTG 57.825 52.632 0.00 0.00 44.79 3.51
1483 1630 0.383231 GCAAGCAGCAAACAGTCTGT 59.617 50.000 0.00 0.00 44.79 3.41
1484 1631 1.862815 GCAAGCAGCAAACAGTCTGTG 60.863 52.381 6.18 0.00 44.79 3.66
1485 1632 0.383231 AAGCAGCAAACAGTCTGTGC 59.617 50.000 6.18 6.79 38.59 4.57
1486 1633 0.749091 AGCAGCAAACAGTCTGTGCA 60.749 50.000 15.57 0.00 40.83 4.57
1487 1634 0.313043 GCAGCAAACAGTCTGTGCAT 59.687 50.000 15.57 0.24 40.83 3.96
1488 1635 1.536766 GCAGCAAACAGTCTGTGCATA 59.463 47.619 15.57 0.00 40.83 3.14
1489 1636 2.030893 GCAGCAAACAGTCTGTGCATAA 60.031 45.455 15.57 0.00 40.83 1.90
1490 1637 3.366679 GCAGCAAACAGTCTGTGCATAAT 60.367 43.478 15.57 0.00 40.83 1.28
1491 1638 4.163552 CAGCAAACAGTCTGTGCATAATG 58.836 43.478 15.57 3.92 40.83 1.90
1492 1639 4.074259 AGCAAACAGTCTGTGCATAATGA 58.926 39.130 15.57 0.00 40.83 2.57
1493 1640 4.155462 AGCAAACAGTCTGTGCATAATGAG 59.845 41.667 15.57 0.00 40.83 2.90
1494 1641 4.154737 GCAAACAGTCTGTGCATAATGAGA 59.845 41.667 6.18 0.00 38.19 3.27
1502 1649 8.242053 CAGTCTGTGCATAATGAGATTTTCTTT 58.758 33.333 0.00 0.00 0.00 2.52
1523 1670 7.981142 TCTTTTAACACTCCATTTATTAGGCG 58.019 34.615 0.00 0.00 0.00 5.52
1525 1672 8.514330 TTTTAACACTCCATTTATTAGGCGAT 57.486 30.769 0.00 0.00 0.00 4.58
1526 1673 7.490962 TTAACACTCCATTTATTAGGCGATG 57.509 36.000 0.00 0.00 0.00 3.84
1527 1674 3.815401 ACACTCCATTTATTAGGCGATGC 59.185 43.478 0.00 0.00 0.00 3.91
1537 1684 4.771127 GGCGATGCCTAATTCCGA 57.229 55.556 0.00 0.00 46.69 4.55
1578 1725 6.586344 TGAAAATTTTCACCTGTTAATGCCA 58.414 32.000 26.01 2.76 41.88 4.92
1595 1742 1.434287 CATTGCAATGCGCCAGCTA 59.566 52.632 25.50 3.44 45.42 3.32
1610 1757 2.247437 GCTAGGAATGGGAAGCGCG 61.247 63.158 0.00 0.00 0.00 6.86
1616 1763 3.740128 AATGGGAAGCGCGCTCGAT 62.740 57.895 36.57 22.13 38.10 3.59
1620 1767 2.577785 GGAAGCGCGCTCGATACAC 61.578 63.158 36.57 17.99 38.10 2.90
1625 1772 1.514228 CGCGCTCGATACACTGTGT 60.514 57.895 18.51 18.51 38.10 3.72
1628 1775 0.109272 CGCTCGATACACTGTGTGGT 60.109 55.000 22.97 11.60 37.94 4.16
1673 1820 3.772853 TATGCTGGGGACGCATGCC 62.773 63.158 13.15 0.00 45.46 4.40
1793 1940 6.154877 CAGAGATATCATATGGAGCTGGAACT 59.845 42.308 5.32 0.00 0.00 3.01
1803 1950 2.818274 CTGGAACTTACGCCCGGC 60.818 66.667 0.00 0.00 0.00 6.13
1877 2024 3.030291 CCTGCAGGCCCAAAATATTGTA 58.970 45.455 22.33 0.00 34.60 2.41
1946 2093 1.605710 CTGTGCTGGTTCCTTGTTCAG 59.394 52.381 0.00 0.00 0.00 3.02
1948 2095 1.876156 GTGCTGGTTCCTTGTTCAGAG 59.124 52.381 0.00 0.00 0.00 3.35
1997 2144 3.305720 TCTGGCAACCTCGGTATCTTAT 58.694 45.455 0.00 0.00 0.00 1.73
2063 2210 1.536180 TGGCAGAAGGAGTTGGCAA 59.464 52.632 0.00 0.00 45.36 4.52
2111 2258 8.974060 AGGATGTGAACTTGTTTTTAAGTCTA 57.026 30.769 0.00 0.00 39.86 2.59
2159 2306 3.433598 GGTAAGCCTGATATGAGCAACCA 60.434 47.826 0.00 0.00 35.82 3.67
2167 2314 5.389859 TGATATGAGCAACCACCAAAAAG 57.610 39.130 0.00 0.00 0.00 2.27
2176 2323 3.457610 ACCACCAAAAAGCAATGTCTG 57.542 42.857 0.00 0.00 0.00 3.51
2193 2340 9.319143 GCAATGTCTGACTAATAAGTATCTTGT 57.681 33.333 9.51 0.00 35.56 3.16
2234 2381 3.758554 ACTGGGTGAAAAGTGATATGTGC 59.241 43.478 0.00 0.00 0.00 4.57
2246 2393 5.186198 AGTGATATGTGCTTTACCACCTTC 58.814 41.667 0.00 0.00 34.85 3.46
2271 2421 4.531854 TCTTCATGGAACTGGTTGTTTGA 58.468 39.130 0.00 0.00 39.30 2.69
2275 2425 5.441500 TCATGGAACTGGTTGTTTGACTTA 58.558 37.500 0.00 0.00 39.30 2.24
2462 2612 9.653287 AGACGATTTTTGATAGATTCAACAGTA 57.347 29.630 0.00 0.00 43.99 2.74
2571 2721 9.258629 TCCTTTTCCATTTCTTGTGATAATCAT 57.741 29.630 0.00 0.00 0.00 2.45
2600 2755 9.265901 AGTATAATGTTAGCTAGCTTGACATTG 57.734 33.333 37.75 2.61 39.54 2.82
2650 2811 9.167311 CACTAACTTTGGTTCATTTATCTAGCT 57.833 33.333 0.00 0.00 36.92 3.32
3062 3223 1.119684 TGCACGCTATCAGGTATGGT 58.880 50.000 0.00 0.00 0.00 3.55
3070 3231 7.548097 CACGCTATCAGGTATGGTCTAAATAT 58.452 38.462 0.00 0.00 0.00 1.28
3073 3234 7.856398 CGCTATCAGGTATGGTCTAAATATACG 59.144 40.741 0.00 0.00 0.00 3.06
3149 3317 6.375455 AGGAAGCCTTATGTGTAAACAGAATG 59.625 38.462 0.00 0.00 46.00 2.67
3208 3376 2.829741 TAATGCTGTTTGGTTTGCCC 57.170 45.000 0.00 0.00 0.00 5.36
3224 3392 1.266178 GCCCCAAGCATGTTACCTTT 58.734 50.000 0.00 0.00 42.97 3.11
3231 3399 5.343249 CCAAGCATGTTACCTTTGAATAGC 58.657 41.667 0.00 0.00 0.00 2.97
3321 3489 5.431731 ACAGGATAATTTGTAGGATGGGTGA 59.568 40.000 0.00 0.00 0.00 4.02
3323 3491 7.006509 CAGGATAATTTGTAGGATGGGTGAAT 58.993 38.462 0.00 0.00 0.00 2.57
3410 3581 4.541973 ACAAGAAAGCATCAATTTCCCC 57.458 40.909 0.00 0.00 37.37 4.81
3411 3582 3.903090 ACAAGAAAGCATCAATTTCCCCA 59.097 39.130 0.00 0.00 37.37 4.96
3413 3584 2.493278 AGAAAGCATCAATTTCCCCACG 59.507 45.455 0.00 0.00 37.37 4.94
3461 3632 2.997980 TGCTCAAACTCTCACAAACCA 58.002 42.857 0.00 0.00 0.00 3.67
3464 3635 3.817647 GCTCAAACTCTCACAAACCATCT 59.182 43.478 0.00 0.00 0.00 2.90
3499 3670 7.320399 TGTTTTGTCTTCCTTTTCCTTCTTTC 58.680 34.615 0.00 0.00 0.00 2.62
3702 3877 1.350684 TGGATTGTAGCAAGGCACAGA 59.649 47.619 0.00 0.00 0.00 3.41
3767 3942 1.202330 CAACTCCTCCTCAGCTCCAT 58.798 55.000 0.00 0.00 0.00 3.41
3783 3958 0.812811 CCATCACCATCTCCTGCACG 60.813 60.000 0.00 0.00 0.00 5.34
3849 4024 1.067582 CTCCCGCTCAATACCGTCC 59.932 63.158 0.00 0.00 0.00 4.79
3903 4078 2.789409 AGTCCCTGCCAAGAACATAC 57.211 50.000 0.00 0.00 0.00 2.39
3992 4167 1.257743 CTCGTGACCCTCCTCTTGAA 58.742 55.000 0.00 0.00 0.00 2.69
4083 4258 4.284550 ATGGCAACCGCACCACCT 62.285 61.111 0.00 0.00 39.19 4.00
4218 4393 6.208007 TGTCATGAATCTGTCTGAAATTGCTT 59.792 34.615 0.00 0.00 0.00 3.91
4249 4424 2.884639 GTGCTGAAAGGGTTGCTTCTAA 59.115 45.455 0.00 0.00 0.00 2.10
4251 4426 2.884639 GCTGAAAGGGTTGCTTCTAACA 59.115 45.455 0.00 0.00 32.22 2.41
4427 4602 0.739462 TAACCGGACATTGCGAGCTG 60.739 55.000 9.46 0.00 30.86 4.24
4453 4628 1.929836 CAGAAGATTTTCTCCGCCTCG 59.070 52.381 0.00 0.00 41.71 4.63
4456 4631 0.741221 AGATTTTCTCCGCCTCGTGC 60.741 55.000 0.00 0.00 0.00 5.34
4614 4789 2.593725 CCCGCCAGCATCTCCATG 60.594 66.667 0.00 0.00 0.00 3.66
4644 4819 2.481952 AGAACACGCAGAATTTCAGCTC 59.518 45.455 11.38 3.18 0.00 4.09
4657 4832 5.886960 ATTTCAGCTCGCAAACTCTAAAT 57.113 34.783 0.00 0.00 0.00 1.40
4681 4856 1.028330 ACAGAACTGCATGCCATCGG 61.028 55.000 16.68 13.26 0.00 4.18
4734 4909 2.793790 GCACATGTAGAGAAGCTCGATG 59.206 50.000 0.00 0.00 35.36 3.84
4737 4912 4.502282 CACATGTAGAGAAGCTCGATGTTC 59.498 45.833 0.00 0.00 35.36 3.18
4904 5084 5.841237 TCTCCTCAGGCTTTATATACAAGCT 59.159 40.000 19.77 10.08 45.18 3.74
4980 5160 2.863739 CGGCTTAAGGCTTAAGTTTGC 58.136 47.619 35.08 25.98 43.52 3.68
4990 5170 2.162681 CTTAAGTTTGCCACTCCCTGG 58.837 52.381 0.00 0.00 44.08 4.45
5047 5227 4.153475 GCAGTTCCACGCTGTATTCTTTTA 59.847 41.667 0.00 0.00 36.42 1.52
5088 5270 1.995484 CATCACTGTAGCAGTCCAACG 59.005 52.381 0.00 0.00 43.43 4.10
5385 5567 4.571372 AATAAGCCGTAGAGACACTAGC 57.429 45.455 0.00 0.00 0.00 3.42
5386 5568 0.733729 AAGCCGTAGAGACACTAGCG 59.266 55.000 0.00 0.00 30.70 4.26
5387 5569 1.096386 AGCCGTAGAGACACTAGCGG 61.096 60.000 12.87 12.87 42.62 5.52
5388 5570 1.355916 CCGTAGAGACACTAGCGGC 59.644 63.158 0.00 0.00 38.15 6.53
5389 5571 1.096386 CCGTAGAGACACTAGCGGCT 61.096 60.000 7.98 7.98 38.15 5.52
5390 5572 1.579698 CGTAGAGACACTAGCGGCTA 58.420 55.000 9.71 9.71 0.00 3.93
5391 5573 1.261089 CGTAGAGACACTAGCGGCTAC 59.739 57.143 5.42 0.00 0.00 3.58
5392 5574 2.563702 GTAGAGACACTAGCGGCTACT 58.436 52.381 5.42 1.33 0.00 2.57
5393 5575 2.131776 AGAGACACTAGCGGCTACTT 57.868 50.000 5.42 0.00 0.00 2.24
5394 5576 3.278668 AGAGACACTAGCGGCTACTTA 57.721 47.619 5.42 0.00 0.00 2.24
5395 5577 3.207778 AGAGACACTAGCGGCTACTTAG 58.792 50.000 5.42 0.29 0.00 2.18
5466 5648 2.121564 CTTGCCTGCACCAAGACACG 62.122 60.000 14.32 0.00 41.64 4.49
5480 5662 5.299279 ACCAAGACACGTCATTTTCTTTGAT 59.701 36.000 0.00 0.00 0.00 2.57
5573 5755 4.802039 GCCATCACATTTTAGAACATGCAG 59.198 41.667 0.00 0.00 0.00 4.41
5606 5788 4.584327 AACAAACTGGTGGTTTAGATGC 57.416 40.909 0.00 0.00 45.26 3.91
5642 5824 2.037144 AGATCAAATGGATGCAAGCCC 58.963 47.619 6.52 1.78 46.54 5.19
5695 5877 3.437049 CAGCTTGCTTAAACTACTGGACC 59.563 47.826 0.00 0.00 0.00 4.46
5727 5909 8.506168 AACAGTGACTTAACAAAAATGAGAGA 57.494 30.769 0.00 0.00 0.00 3.10
5817 6006 1.612726 GCTTGCACAGGAGGACATCTT 60.613 52.381 0.00 0.00 0.00 2.40
5846 6036 4.118093 TCACATCATCGAACACGGTATT 57.882 40.909 0.00 0.00 0.00 1.89
5871 6061 4.742167 CGAACAGATAGCTTGTAGATGTGG 59.258 45.833 0.00 0.00 0.00 4.17
5891 6081 5.185454 GTGGATCACCTCATCACATTACAA 58.815 41.667 0.00 0.00 37.04 2.41
5892 6082 5.647658 GTGGATCACCTCATCACATTACAAA 59.352 40.000 0.00 0.00 37.04 2.83
5998 6188 4.078571 TGGTCCTCATCAGGTAGTAGGATT 60.079 45.833 0.00 0.00 41.28 3.01
6003 6193 4.878968 TCATCAGGTAGTAGGATTCCACA 58.121 43.478 5.29 0.00 0.00 4.17
6150 7441 6.238703 CCTTAAACGTTGGGCTTAAACAGTAA 60.239 38.462 0.00 0.00 0.00 2.24
6217 7508 8.843885 ACATAAGTAGGTTTGTCTTTTACTCC 57.156 34.615 0.00 0.00 0.00 3.85
6218 7509 7.881751 ACATAAGTAGGTTTGTCTTTTACTCCC 59.118 37.037 0.00 0.00 0.00 4.30
6219 7510 6.511017 AAGTAGGTTTGTCTTTTACTCCCT 57.489 37.500 0.00 0.00 0.00 4.20
6220 7511 6.111669 AGTAGGTTTGTCTTTTACTCCCTC 57.888 41.667 0.00 0.00 0.00 4.30
6221 7512 4.368565 AGGTTTGTCTTTTACTCCCTCC 57.631 45.455 0.00 0.00 0.00 4.30
6222 7513 3.072211 GGTTTGTCTTTTACTCCCTCCG 58.928 50.000 0.00 0.00 0.00 4.63
6223 7514 3.495629 GGTTTGTCTTTTACTCCCTCCGT 60.496 47.826 0.00 0.00 0.00 4.69
6224 7515 3.672767 TTGTCTTTTACTCCCTCCGTC 57.327 47.619 0.00 0.00 0.00 4.79
6225 7516 1.897802 TGTCTTTTACTCCCTCCGTCC 59.102 52.381 0.00 0.00 0.00 4.79
6226 7517 1.135170 GTCTTTTACTCCCTCCGTCCG 60.135 57.143 0.00 0.00 0.00 4.79
6227 7518 1.180029 CTTTTACTCCCTCCGTCCGA 58.820 55.000 0.00 0.00 0.00 4.55
6228 7519 1.547372 CTTTTACTCCCTCCGTCCGAA 59.453 52.381 0.00 0.00 0.00 4.30
6229 7520 1.631405 TTTACTCCCTCCGTCCGAAA 58.369 50.000 0.00 0.00 0.00 3.46
6230 7521 1.631405 TTACTCCCTCCGTCCGAAAA 58.369 50.000 0.00 0.00 0.00 2.29
6231 7522 1.856629 TACTCCCTCCGTCCGAAAAT 58.143 50.000 0.00 0.00 0.00 1.82
6232 7523 1.856629 ACTCCCTCCGTCCGAAAATA 58.143 50.000 0.00 0.00 0.00 1.40
6233 7524 1.479730 ACTCCCTCCGTCCGAAAATAC 59.520 52.381 0.00 0.00 0.00 1.89
6234 7525 1.755380 CTCCCTCCGTCCGAAAATACT 59.245 52.381 0.00 0.00 0.00 2.12
6235 7526 2.167900 CTCCCTCCGTCCGAAAATACTT 59.832 50.000 0.00 0.00 0.00 2.24
6236 7527 2.093869 TCCCTCCGTCCGAAAATACTTG 60.094 50.000 0.00 0.00 0.00 3.16
6237 7528 2.354403 CCCTCCGTCCGAAAATACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
6238 7529 2.928116 CCTCCGTCCGAAAATACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
6239 7530 3.581755 CTCCGTCCGAAAATACTTGTCA 58.418 45.455 0.00 0.00 0.00 3.58
6240 7531 4.181578 CTCCGTCCGAAAATACTTGTCAT 58.818 43.478 0.00 0.00 0.00 3.06
6241 7532 4.178540 TCCGTCCGAAAATACTTGTCATC 58.821 43.478 0.00 0.00 0.00 2.92
6242 7533 3.930229 CCGTCCGAAAATACTTGTCATCA 59.070 43.478 0.00 0.00 0.00 3.07
6243 7534 4.390603 CCGTCCGAAAATACTTGTCATCAA 59.609 41.667 0.00 0.00 0.00 2.57
6244 7535 5.106869 CCGTCCGAAAATACTTGTCATCAAA 60.107 40.000 0.00 0.00 32.87 2.69
6245 7536 6.367421 CGTCCGAAAATACTTGTCATCAAAA 58.633 36.000 0.00 0.00 32.87 2.44
6246 7537 6.853872 CGTCCGAAAATACTTGTCATCAAAAA 59.146 34.615 0.00 0.00 32.87 1.94
6247 7538 7.059488 CGTCCGAAAATACTTGTCATCAAAAAG 59.941 37.037 0.00 0.00 32.87 2.27
6248 7539 7.326063 GTCCGAAAATACTTGTCATCAAAAAGG 59.674 37.037 0.00 0.00 32.87 3.11
6249 7540 7.229707 TCCGAAAATACTTGTCATCAAAAAGGA 59.770 33.333 0.00 0.00 32.87 3.36
6250 7541 7.326063 CCGAAAATACTTGTCATCAAAAAGGAC 59.674 37.037 0.00 0.00 32.87 3.85
6251 7542 7.860373 CGAAAATACTTGTCATCAAAAAGGACA 59.140 33.333 0.00 0.00 39.60 4.02
6252 7543 9.528018 GAAAATACTTGTCATCAAAAAGGACAA 57.472 29.630 5.33 5.33 46.09 3.18
6258 7549 5.669477 TGTCATCAAAAAGGACAAAAAGGG 58.331 37.500 0.00 0.00 38.50 3.95
6259 7550 5.423610 TGTCATCAAAAAGGACAAAAAGGGA 59.576 36.000 0.00 0.00 38.50 4.20
6260 7551 6.099557 TGTCATCAAAAAGGACAAAAAGGGAT 59.900 34.615 0.00 0.00 38.50 3.85
6261 7552 6.424812 GTCATCAAAAAGGACAAAAAGGGATG 59.575 38.462 0.00 0.00 0.00 3.51
6262 7553 5.948742 TCAAAAAGGACAAAAAGGGATGT 57.051 34.783 0.00 0.00 0.00 3.06
6263 7554 7.288852 TCATCAAAAAGGACAAAAAGGGATGTA 59.711 33.333 0.00 0.00 32.47 2.29
6264 7555 7.610580 TCAAAAAGGACAAAAAGGGATGTAT 57.389 32.000 0.00 0.00 0.00 2.29
6265 7556 7.666623 TCAAAAAGGACAAAAAGGGATGTATC 58.333 34.615 0.00 0.00 0.00 2.24
6266 7557 7.508977 TCAAAAAGGACAAAAAGGGATGTATCT 59.491 33.333 0.00 0.00 0.00 1.98
6267 7558 8.802267 CAAAAAGGACAAAAAGGGATGTATCTA 58.198 33.333 0.00 0.00 0.00 1.98
6268 7559 8.581253 AAAAGGACAAAAAGGGATGTATCTAG 57.419 34.615 0.00 0.00 0.00 2.43
6269 7560 7.510675 AAGGACAAAAAGGGATGTATCTAGA 57.489 36.000 0.00 0.00 0.00 2.43
6270 7561 7.510675 AGGACAAAAAGGGATGTATCTAGAA 57.489 36.000 0.00 0.00 0.00 2.10
6271 7562 7.339482 AGGACAAAAAGGGATGTATCTAGAAC 58.661 38.462 0.00 0.00 0.00 3.01
6272 7563 7.182930 AGGACAAAAAGGGATGTATCTAGAACT 59.817 37.037 0.00 0.00 0.00 3.01
6273 7564 8.483758 GGACAAAAAGGGATGTATCTAGAACTA 58.516 37.037 0.00 0.00 0.00 2.24
6274 7565 9.886132 GACAAAAAGGGATGTATCTAGAACTAA 57.114 33.333 0.00 0.00 0.00 2.24
6296 7587 9.845214 ACTAAAATACATCTAGATACATCCCCT 57.155 33.333 4.54 0.00 0.00 4.79
6304 7595 9.170890 ACATCTAGATACATCCCCTTTTATTCA 57.829 33.333 4.54 0.00 0.00 2.57
6310 7601 9.713684 AGATACATCCCCTTTTATTCATTTTGA 57.286 29.630 0.00 0.00 0.00 2.69
6313 7604 8.378115 ACATCCCCTTTTATTCATTTTGATGA 57.622 30.769 0.00 0.00 32.39 2.92
6314 7605 8.260114 ACATCCCCTTTTATTCATTTTGATGAC 58.740 33.333 0.00 0.00 32.39 3.06
6315 7606 7.789202 TCCCCTTTTATTCATTTTGATGACA 57.211 32.000 0.00 0.00 0.00 3.58
6316 7607 8.200024 TCCCCTTTTATTCATTTTGATGACAA 57.800 30.769 0.00 0.00 0.00 3.18
6317 7608 8.313292 TCCCCTTTTATTCATTTTGATGACAAG 58.687 33.333 0.00 0.00 37.32 3.16
6318 7609 8.096414 CCCCTTTTATTCATTTTGATGACAAGT 58.904 33.333 0.00 0.00 37.32 3.16
6325 7616 8.915871 ATTCATTTTGATGACAAGTATTTCCG 57.084 30.769 0.00 0.00 37.32 4.30
6326 7617 6.851609 TCATTTTGATGACAAGTATTTCCGG 58.148 36.000 0.00 0.00 37.32 5.14
6327 7618 6.657117 TCATTTTGATGACAAGTATTTCCGGA 59.343 34.615 0.00 0.00 37.32 5.14
6328 7619 5.873179 TTTGATGACAAGTATTTCCGGAC 57.127 39.130 1.83 0.00 37.32 4.79
6329 7620 3.517602 TGATGACAAGTATTTCCGGACG 58.482 45.455 1.83 0.00 0.00 4.79
6330 7621 2.373540 TGACAAGTATTTCCGGACGG 57.626 50.000 1.83 3.96 0.00 4.79
6331 7622 1.894466 TGACAAGTATTTCCGGACGGA 59.106 47.619 1.83 9.76 43.52 4.69
6332 7623 2.094390 TGACAAGTATTTCCGGACGGAG 60.094 50.000 13.64 3.15 46.06 4.63
6333 7624 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
6334 7625 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
6335 7626 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
6336 7627 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
6472 7765 0.608130 GTTCAAATGCCCACCCCTTC 59.392 55.000 0.00 0.00 0.00 3.46
6496 7789 8.750515 TCAACATTAGATTTGCCTTCATATGA 57.249 30.769 0.00 0.00 0.00 2.15
6498 7791 8.843262 CAACATTAGATTTGCCTTCATATGAGA 58.157 33.333 5.39 0.00 0.00 3.27
6499 7792 9.584008 AACATTAGATTTGCCTTCATATGAGAT 57.416 29.630 5.39 0.00 0.00 2.75
6500 7793 9.584008 ACATTAGATTTGCCTTCATATGAGATT 57.416 29.630 5.39 0.00 0.00 2.40
6530 7823 9.705103 TTTTTGAGGAATCCTTCATATGAGAAT 57.295 29.630 2.09 0.00 31.76 2.40
6581 7874 6.316390 GGAAACATTAGTACTGATCTTGGGTG 59.684 42.308 5.39 0.00 0.00 4.61
6669 7969 2.923121 TGCTCCTTCATCAACCTATGC 58.077 47.619 0.00 0.00 0.00 3.14
6715 8015 6.873076 CCCTTCAGCTGTTATTTTTGCATTTA 59.127 34.615 14.67 0.00 0.00 1.40
6729 8029 4.818534 TGCATTTATTCTGAAGATCGGC 57.181 40.909 0.00 0.00 0.00 5.54
6738 8038 0.174845 TGAAGATCGGCGGTAAGGTG 59.825 55.000 7.21 0.00 0.00 4.00
6741 8041 1.591863 GATCGGCGGTAAGGTGAGC 60.592 63.158 7.21 0.00 0.00 4.26
6743 8043 2.017559 ATCGGCGGTAAGGTGAGCTC 62.018 60.000 6.82 6.82 0.00 4.09
6771 8076 7.068702 TGTTTTATGCAATTCTGGGAGGATAT 58.931 34.615 0.00 0.00 0.00 1.63
6778 8083 5.195940 CAATTCTGGGAGGATATGTTGTGT 58.804 41.667 0.00 0.00 0.00 3.72
6805 8110 3.453717 TCTGCCTGAATTCTAGCATGAGT 59.546 43.478 19.00 0.00 34.16 3.41
6814 8119 4.744795 TTCTAGCATGAGTCTCCTTTCC 57.255 45.455 0.00 0.00 0.00 3.13
6824 8129 2.528127 TCCTTTCCGTGGCAGGGA 60.528 61.111 24.17 24.17 0.00 4.20
6848 8153 1.496001 TGGCTGGGAATCATATGTGCT 59.504 47.619 1.90 0.00 0.00 4.40
6864 8169 8.102676 TCATATGTGCTATGGTAGTGCAAATAT 58.897 33.333 1.90 0.00 44.04 1.28
6919 8224 2.601905 GGATAAAGAGGTAGGCCCGTA 58.398 52.381 0.00 0.00 38.74 4.02
6943 8253 6.479006 ACTCTCTGTTGATGAAATTGGATGA 58.521 36.000 0.00 0.00 0.00 2.92
7000 8503 3.494561 TGGGAAGGACCAGCTTACT 57.505 52.632 0.00 0.00 41.20 2.24
7001 8504 2.634639 TGGGAAGGACCAGCTTACTA 57.365 50.000 0.00 0.00 41.20 1.82
7002 8505 2.467880 TGGGAAGGACCAGCTTACTAG 58.532 52.381 0.00 0.00 41.20 2.57
7021 8524 1.679311 CTTACACAGCAGGGCAGGA 59.321 57.895 0.00 0.00 0.00 3.86
7039 8542 2.366916 AGGACATAGCCATAGCAGTGTC 59.633 50.000 10.79 10.79 46.48 3.67
7043 8546 2.028125 TAGCCATAGCAGTGTCGGGC 62.028 60.000 8.57 8.57 43.56 6.13
7045 8548 2.584064 CATAGCAGTGTCGGGCCA 59.416 61.111 4.39 0.00 0.00 5.36
7048 8551 0.392998 ATAGCAGTGTCGGGCCAAAG 60.393 55.000 4.39 0.00 0.00 2.77
7055 8558 2.944390 TCGGGCCAAAGGGGGAAT 60.944 61.111 4.39 0.00 37.04 3.01
7058 8561 2.777146 GGCCAAAGGGGGAATGGA 59.223 61.111 0.00 0.00 36.27 3.41
7070 8573 1.679139 GGAATGGAATGCACCGATGA 58.321 50.000 0.00 0.00 0.00 2.92
7124 8637 7.373493 CCTTTTATGCTCTGTGACAAGAAAAT 58.627 34.615 0.00 0.00 0.00 1.82
7125 8638 8.514594 CCTTTTATGCTCTGTGACAAGAAAATA 58.485 33.333 0.00 0.00 0.00 1.40
7163 8677 2.103432 TCCGCTGAACTTACTTTCCACA 59.897 45.455 0.00 0.00 0.00 4.17
7164 8678 3.074412 CCGCTGAACTTACTTTCCACAT 58.926 45.455 0.00 0.00 0.00 3.21
7222 8736 6.376018 TGCTTGGTAAAGTTGGTATGATAACC 59.624 38.462 0.00 0.00 36.57 2.85
7246 8760 5.627182 AGTCTGGTATGATTGAATCTGCT 57.373 39.130 6.73 0.00 0.00 4.24
7251 8765 4.571984 TGGTATGATTGAATCTGCTTCACG 59.428 41.667 6.73 0.00 43.54 4.35
7263 8777 1.337728 TGCTTCACGACCACCATACAG 60.338 52.381 0.00 0.00 0.00 2.74
7303 8825 3.129502 CGTCATGCTGTGCTGGGG 61.130 66.667 0.00 0.00 0.00 4.96
7431 8953 5.341872 AGAGTTCAGGAATCAGATGACAG 57.658 43.478 0.00 0.00 0.00 3.51
7454 8976 4.030529 GCATAACATTTGCGTGAATGTCAC 59.969 41.667 15.55 0.00 46.53 3.67
7505 9197 1.066645 GCCCAGCTTTTCATCCAAAGG 60.067 52.381 0.00 0.00 34.75 3.11
7510 9202 5.125356 CCAGCTTTTCATCCAAAGGTTTTT 58.875 37.500 0.00 0.00 41.49 1.94
7513 9205 4.808895 GCTTTTCATCCAAAGGTTTTTCGT 59.191 37.500 0.00 0.00 34.75 3.85
7518 9210 6.308371 TCATCCAAAGGTTTTTCGTAGTTC 57.692 37.500 0.00 0.00 0.00 3.01
7535 9227 5.632347 CGTAGTTCGATACAGTTGAAAAGGT 59.368 40.000 0.00 0.00 42.86 3.50
7550 9242 2.767644 AAGGTAACAAAAGCCAGGGT 57.232 45.000 0.00 0.00 41.41 4.34
7551 9243 1.995376 AGGTAACAAAAGCCAGGGTG 58.005 50.000 0.00 0.00 41.41 4.61
7623 9327 4.952335 AGGTCATCATTTCTGATTGTTCCC 59.048 41.667 0.00 0.00 40.20 3.97
7628 9332 4.280819 TCATTTCTGATTGTTCCCCCATC 58.719 43.478 0.00 0.00 0.00 3.51
7641 9355 2.090210 TCCCCCATCAAGGTAGATGCTA 60.090 50.000 0.00 0.00 43.15 3.49
7695 9412 5.973651 TGAATGTCATCATTTCTCGCTAC 57.026 39.130 0.00 0.00 43.33 3.58
7703 9420 2.002586 CATTTCTCGCTACACCACCAG 58.997 52.381 0.00 0.00 0.00 4.00
7707 9424 1.542915 TCTCGCTACACCACCAGTAAC 59.457 52.381 0.00 0.00 0.00 2.50
7752 9689 1.593006 GTTCATTCATACCGCGGAGTG 59.407 52.381 35.90 27.74 38.04 3.51
7753 9690 0.821517 TCATTCATACCGCGGAGTGT 59.178 50.000 35.90 12.54 35.45 3.55
7754 9691 1.202371 TCATTCATACCGCGGAGTGTC 60.202 52.381 35.90 0.00 35.45 3.67
7755 9692 0.248907 ATTCATACCGCGGAGTGTCG 60.249 55.000 35.90 13.56 35.45 4.35
7761 9698 2.795973 CGCGGAGTGTCGGATACA 59.204 61.111 7.64 0.00 35.06 2.29
7762 9699 1.359117 CGCGGAGTGTCGGATACAT 59.641 57.895 7.64 0.00 41.10 2.29
7763 9700 0.934901 CGCGGAGTGTCGGATACATG 60.935 60.000 7.64 0.00 41.10 3.21
7764 9701 0.102481 GCGGAGTGTCGGATACATGT 59.898 55.000 2.69 2.69 41.10 3.21
7765 9702 1.470979 GCGGAGTGTCGGATACATGTT 60.471 52.381 2.30 0.00 41.10 2.71
7766 9703 2.888594 CGGAGTGTCGGATACATGTTT 58.111 47.619 2.30 0.00 41.10 2.83
7767 9704 2.603110 CGGAGTGTCGGATACATGTTTG 59.397 50.000 2.30 0.00 41.10 2.93
7768 9705 3.674955 CGGAGTGTCGGATACATGTTTGA 60.675 47.826 2.30 0.00 41.10 2.69
7769 9706 4.442706 GGAGTGTCGGATACATGTTTGAT 58.557 43.478 2.30 0.00 41.10 2.57
7770 9707 4.271049 GGAGTGTCGGATACATGTTTGATG 59.729 45.833 2.30 0.00 41.10 3.07
7771 9708 4.832248 AGTGTCGGATACATGTTTGATGT 58.168 39.130 2.30 0.00 41.10 3.06
7772 9709 5.972935 AGTGTCGGATACATGTTTGATGTA 58.027 37.500 2.30 0.00 41.10 2.29
7773 9710 6.582636 AGTGTCGGATACATGTTTGATGTAT 58.417 36.000 2.30 6.96 45.01 2.29
7774 9711 7.722363 AGTGTCGGATACATGTTTGATGTATA 58.278 34.615 2.30 0.00 43.10 1.47
7775 9712 8.367911 AGTGTCGGATACATGTTTGATGTATAT 58.632 33.333 2.30 0.00 43.10 0.86
7776 9713 8.988934 GTGTCGGATACATGTTTGATGTATATT 58.011 33.333 2.30 0.00 43.10 1.28
7777 9714 9.554395 TGTCGGATACATGTTTGATGTATATTT 57.446 29.630 2.30 0.00 43.10 1.40
7834 9771 6.426980 TGATATGCTCAAGTGATTGAACAC 57.573 37.500 0.00 0.00 40.60 3.32
7838 9775 3.002246 TGCTCAAGTGATTGAACACGTTC 59.998 43.478 2.89 2.89 44.35 3.95
7850 9787 5.728351 TGAACACGTTCAGAAACCTTTAG 57.272 39.130 8.51 0.00 43.90 1.85
7851 9788 5.180271 TGAACACGTTCAGAAACCTTTAGT 58.820 37.500 8.51 0.00 43.90 2.24
7852 9789 6.339730 TGAACACGTTCAGAAACCTTTAGTA 58.660 36.000 8.51 0.00 43.90 1.82
7859 9796 8.529476 ACGTTCAGAAACCTTTAGTATATCTGT 58.471 33.333 0.00 0.00 36.20 3.41
7890 9852 4.617253 ACTAACTGTGCACATTCACCTA 57.383 40.909 22.00 3.10 36.17 3.08
7906 9868 5.818678 TCACCTACACAGTTTCCATACTT 57.181 39.130 0.00 0.00 0.00 2.24
7907 9869 6.921486 TCACCTACACAGTTTCCATACTTA 57.079 37.500 0.00 0.00 0.00 2.24
7910 9872 5.544948 ACCTACACAGTTTCCATACTTACCA 59.455 40.000 0.00 0.00 0.00 3.25
7912 9874 6.761714 CCTACACAGTTTCCATACTTACCATC 59.238 42.308 0.00 0.00 0.00 3.51
7913 9875 5.175859 ACACAGTTTCCATACTTACCATCG 58.824 41.667 0.00 0.00 0.00 3.84
7918 9903 5.363005 AGTTTCCATACTTACCATCGCTACT 59.637 40.000 0.00 0.00 0.00 2.57
7920 9905 5.954296 TCCATACTTACCATCGCTACTAC 57.046 43.478 0.00 0.00 0.00 2.73
7922 9907 5.472478 TCCATACTTACCATCGCTACTACTG 59.528 44.000 0.00 0.00 0.00 2.74
7930 9915 1.460504 TCGCTACTACTGGTCCTGTG 58.539 55.000 11.49 4.61 0.00 3.66
7977 9962 2.374184 GCAAATGGTGGTAGGCATACA 58.626 47.619 11.12 0.00 33.21 2.29
8012 9997 5.468072 CGAAAGCTGCAAGAGACCATATTAT 59.532 40.000 1.02 0.00 34.07 1.28
8013 9998 6.017605 CGAAAGCTGCAAGAGACCATATTATT 60.018 38.462 1.02 0.00 34.07 1.40
8014 9999 7.171508 CGAAAGCTGCAAGAGACCATATTATTA 59.828 37.037 1.02 0.00 34.07 0.98
8015 10000 8.930846 AAAGCTGCAAGAGACCATATTATTAT 57.069 30.769 1.02 0.00 34.07 1.28
8017 10002 9.664332 AAGCTGCAAGAGACCATATTATTATAG 57.336 33.333 1.02 0.00 34.07 1.31
8093 10078 4.202419 ACCTGTACAGTTTTGCCAGTCATA 60.202 41.667 21.18 0.00 0.00 2.15
8201 10201 2.969238 GCATCTCGTCGCCATGGG 60.969 66.667 15.13 3.69 0.00 4.00
8236 10236 1.920325 CTCCTCTCCACCTTGGCCA 60.920 63.158 0.00 0.00 37.47 5.36
8439 10439 3.681835 AGCTCCGTCGTGGTGGTC 61.682 66.667 0.00 0.00 37.38 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 9.436957 TTTATCGAAAAGCTAAGAAAGACAGAT 57.563 29.630 0.00 0.00 0.00 2.90
51 58 5.540282 AAGAAAAGAAACGCGATTTTTCG 57.460 34.783 15.93 0.00 41.81 3.46
52 59 6.834371 GTGAAAGAAAAGAAACGCGATTTTTC 59.166 34.615 15.93 20.26 38.93 2.29
58 70 2.285950 CCGTGAAAGAAAAGAAACGCGA 60.286 45.455 15.93 0.00 34.05 5.87
59 71 2.034076 CCGTGAAAGAAAAGAAACGCG 58.966 47.619 3.53 3.53 0.00 6.01
66 78 3.185797 CCGTAACTCCCGTGAAAGAAAAG 59.814 47.826 0.00 0.00 0.00 2.27
84 96 4.250464 CCTATCACAGAAGCAAAACCGTA 58.750 43.478 0.00 0.00 0.00 4.02
103 115 0.589223 CGAAAGCAAAACGGTGCCTA 59.411 50.000 4.59 0.00 46.14 3.93
179 227 4.170723 GTGACTCTCGCGAAAGGG 57.829 61.111 14.96 3.76 46.71 3.95
404 499 4.379243 AACCGTGCCTCTCGCTGG 62.379 66.667 0.00 0.00 39.00 4.85
405 500 3.114616 CAACCGTGCCTCTCGCTG 61.115 66.667 0.00 0.00 38.78 5.18
406 501 3.616721 ACAACCGTGCCTCTCGCT 61.617 61.111 0.00 0.00 38.78 4.93
519 632 7.557719 AGATCCCATGTTGATAGGTTTTAACAG 59.442 37.037 0.00 0.00 36.59 3.16
564 679 5.540911 GCTTTCAACCATTGGATTCTTTGA 58.459 37.500 10.37 5.66 0.00 2.69
568 683 2.493278 CCGCTTTCAACCATTGGATTCT 59.507 45.455 10.37 0.00 0.00 2.40
580 695 4.387862 GTCTAAATCTCGAACCGCTTTCAA 59.612 41.667 0.00 0.00 33.24 2.69
671 789 2.073816 GTGGTATGTGCGCTACTTGTT 58.926 47.619 9.73 0.00 0.00 2.83
687 805 2.550208 CCTCTTTAGGTTGCGAAGTGGT 60.550 50.000 0.00 0.00 38.19 4.16
700 818 5.123027 GCAAAGATCACTCCAACCTCTTTAG 59.877 44.000 0.00 0.00 35.12 1.85
701 819 5.003804 GCAAAGATCACTCCAACCTCTTTA 58.996 41.667 0.00 0.00 35.12 1.85
702 820 3.823304 GCAAAGATCACTCCAACCTCTTT 59.177 43.478 0.00 0.00 36.79 2.52
703 821 3.181440 TGCAAAGATCACTCCAACCTCTT 60.181 43.478 0.00 0.00 0.00 2.85
704 822 2.373169 TGCAAAGATCACTCCAACCTCT 59.627 45.455 0.00 0.00 0.00 3.69
705 823 2.783135 TGCAAAGATCACTCCAACCTC 58.217 47.619 0.00 0.00 0.00 3.85
707 825 3.507233 TCATTGCAAAGATCACTCCAACC 59.493 43.478 1.71 0.00 0.00 3.77
750 877 0.764369 TGAACTGGAGCCTGACAGGT 60.764 55.000 22.58 9.63 37.80 4.00
754 881 0.326264 ATGGTGAACTGGAGCCTGAC 59.674 55.000 0.08 0.00 0.00 3.51
765 892 0.034089 AGGCTGGGCTAATGGTGAAC 60.034 55.000 0.00 0.00 0.00 3.18
770 897 2.508526 GTATTCAGGCTGGGCTAATGG 58.491 52.381 15.73 0.00 0.00 3.16
771 898 2.508526 GGTATTCAGGCTGGGCTAATG 58.491 52.381 15.73 0.00 0.00 1.90
773 900 0.468226 CGGTATTCAGGCTGGGCTAA 59.532 55.000 15.73 1.24 0.00 3.09
774 901 2.040009 GCGGTATTCAGGCTGGGCTA 62.040 60.000 15.73 1.13 0.00 3.93
775 902 2.911143 CGGTATTCAGGCTGGGCT 59.089 61.111 15.73 2.14 0.00 5.19
776 903 2.902343 GCGGTATTCAGGCTGGGC 60.902 66.667 15.73 5.35 0.00 5.36
777 904 2.588877 CGCGGTATTCAGGCTGGG 60.589 66.667 15.73 0.00 0.00 4.45
798 925 2.783510 AGGACTGGGTTTCTTTCTCCAA 59.216 45.455 0.00 0.00 0.00 3.53
799 926 2.418669 AGGACTGGGTTTCTTTCTCCA 58.581 47.619 0.00 0.00 0.00 3.86
880 1008 0.745845 CAGGCGATGAAAGGGGACAG 60.746 60.000 0.00 0.00 0.00 3.51
966 1094 0.951558 GGCCTTTGAGCTTTGACGAA 59.048 50.000 0.00 0.00 0.00 3.85
988 1116 2.679996 GCCCATTCCACCCACACC 60.680 66.667 0.00 0.00 0.00 4.16
989 1117 1.305213 ATGCCCATTCCACCCACAC 60.305 57.895 0.00 0.00 0.00 3.82
990 1118 1.305129 CATGCCCATTCCACCCACA 60.305 57.895 0.00 0.00 0.00 4.17
1280 1408 1.363885 GGTTTGGTATCGTCACGGGC 61.364 60.000 0.00 0.00 0.00 6.13
1281 1409 0.037139 TGGTTTGGTATCGTCACGGG 60.037 55.000 0.00 0.00 0.00 5.28
1284 1412 1.467342 GGCTTGGTTTGGTATCGTCAC 59.533 52.381 0.00 0.00 0.00 3.67
1285 1413 1.349688 AGGCTTGGTTTGGTATCGTCA 59.650 47.619 0.00 0.00 0.00 4.35
1286 1414 2.007608 GAGGCTTGGTTTGGTATCGTC 58.992 52.381 0.00 0.00 0.00 4.20
1287 1415 1.674817 CGAGGCTTGGTTTGGTATCGT 60.675 52.381 0.00 0.00 0.00 3.73
1288 1416 1.006832 CGAGGCTTGGTTTGGTATCG 58.993 55.000 0.00 0.00 0.00 2.92
1289 1417 1.737793 CACGAGGCTTGGTTTGGTATC 59.262 52.381 6.71 0.00 0.00 2.24
1290 1418 1.073284 ACACGAGGCTTGGTTTGGTAT 59.927 47.619 6.71 0.00 0.00 2.73
1291 1419 0.470766 ACACGAGGCTTGGTTTGGTA 59.529 50.000 6.71 0.00 0.00 3.25
1292 1420 0.395173 AACACGAGGCTTGGTTTGGT 60.395 50.000 6.71 0.00 0.00 3.67
1293 1421 0.030638 CAACACGAGGCTTGGTTTGG 59.969 55.000 6.71 0.00 0.00 3.28
1294 1422 0.594796 GCAACACGAGGCTTGGTTTG 60.595 55.000 6.71 9.58 0.00 2.93
1295 1423 0.751643 AGCAACACGAGGCTTGGTTT 60.752 50.000 6.71 0.00 36.92 3.27
1296 1424 0.107831 TAGCAACACGAGGCTTGGTT 59.892 50.000 6.71 4.87 41.41 3.67
1297 1425 0.602905 GTAGCAACACGAGGCTTGGT 60.603 55.000 6.71 0.00 41.41 3.67
1298 1426 1.298859 GGTAGCAACACGAGGCTTGG 61.299 60.000 6.71 0.00 41.41 3.61
1299 1427 0.320771 AGGTAGCAACACGAGGCTTG 60.321 55.000 0.00 0.00 41.41 4.01
1300 1428 0.320771 CAGGTAGCAACACGAGGCTT 60.321 55.000 0.00 0.00 41.41 4.35
1301 1429 1.293498 CAGGTAGCAACACGAGGCT 59.707 57.895 0.00 0.00 43.94 4.58
1302 1430 1.004918 ACAGGTAGCAACACGAGGC 60.005 57.895 0.00 0.00 0.00 4.70
1303 1431 0.317160 TCACAGGTAGCAACACGAGG 59.683 55.000 0.00 0.00 0.00 4.63
1304 1432 2.061773 CTTCACAGGTAGCAACACGAG 58.938 52.381 0.00 0.00 0.00 4.18
1305 1433 1.872237 GCTTCACAGGTAGCAACACGA 60.872 52.381 0.00 0.00 37.38 4.35
1372 1516 0.793104 GGTGCTCGCGTTGCATTTAC 60.793 55.000 25.67 15.80 42.69 2.01
1373 1517 1.499949 GGTGCTCGCGTTGCATTTA 59.500 52.632 25.67 6.66 42.69 1.40
1382 1526 4.803426 GAGTCCTGGGTGCTCGCG 62.803 72.222 0.00 0.00 0.00 5.87
1390 1534 0.183014 TAGTAGCTCCGAGTCCTGGG 59.817 60.000 0.00 0.00 0.00 4.45
1392 1536 2.489971 CTCTAGTAGCTCCGAGTCCTG 58.510 57.143 0.00 0.00 0.00 3.86
1397 1541 5.831702 TTAAAACCTCTAGTAGCTCCGAG 57.168 43.478 0.00 0.00 0.00 4.63
1398 1542 5.301298 GGATTAAAACCTCTAGTAGCTCCGA 59.699 44.000 0.00 0.00 0.00 4.55
1399 1543 5.068723 TGGATTAAAACCTCTAGTAGCTCCG 59.931 44.000 0.00 0.00 0.00 4.63
1400 1544 6.481434 TGGATTAAAACCTCTAGTAGCTCC 57.519 41.667 0.00 0.00 0.00 4.70
1402 1546 8.325477 AGAATGGATTAAAACCTCTAGTAGCT 57.675 34.615 0.00 0.00 0.00 3.32
1406 1550 9.280456 TCCTTAGAATGGATTAAAACCTCTAGT 57.720 33.333 0.00 0.00 0.00 2.57
1409 1553 9.822727 TTTTCCTTAGAATGGATTAAAACCTCT 57.177 29.630 4.19 2.78 33.09 3.69
1426 1570 8.778358 GCTACCTTATGTGATGATTTTCCTTAG 58.222 37.037 0.00 0.00 0.00 2.18
1428 1572 7.349598 AGCTACCTTATGTGATGATTTTCCTT 58.650 34.615 0.00 0.00 0.00 3.36
1431 1575 7.792374 TGAGCTACCTTATGTGATGATTTTC 57.208 36.000 0.00 0.00 0.00 2.29
1437 1581 7.212976 AGTTACATGAGCTACCTTATGTGATG 58.787 38.462 0.00 0.00 44.90 3.07
1442 1586 6.749139 TGCTAGTTACATGAGCTACCTTATG 58.251 40.000 0.00 0.00 40.03 1.90
1444 1588 6.683110 GCTTGCTAGTTACATGAGCTACCTTA 60.683 42.308 0.00 0.00 37.12 2.69
1447 1591 3.804873 GCTTGCTAGTTACATGAGCTACC 59.195 47.826 0.00 0.00 37.12 3.18
1448 1592 4.433615 TGCTTGCTAGTTACATGAGCTAC 58.566 43.478 0.00 0.00 37.12 3.58
1449 1593 4.686972 CTGCTTGCTAGTTACATGAGCTA 58.313 43.478 0.00 0.00 37.12 3.32
1450 1594 3.529533 CTGCTTGCTAGTTACATGAGCT 58.470 45.455 0.00 0.00 37.12 4.09
1454 1601 4.161333 GTTTGCTGCTTGCTAGTTACATG 58.839 43.478 0.00 0.00 43.37 3.21
1459 1606 2.291741 GACTGTTTGCTGCTTGCTAGTT 59.708 45.455 0.00 0.00 43.37 2.24
1462 1609 1.875514 CAGACTGTTTGCTGCTTGCTA 59.124 47.619 0.00 0.00 43.37 3.49
1467 1614 0.749091 TGCACAGACTGTTTGCTGCT 60.749 50.000 16.41 0.00 37.16 4.24
1471 1618 4.154737 TCTCATTATGCACAGACTGTTTGC 59.845 41.667 5.04 8.24 36.76 3.68
1472 1619 5.868043 TCTCATTATGCACAGACTGTTTG 57.132 39.130 5.04 0.00 0.00 2.93
1476 1623 7.317842 AGAAAATCTCATTATGCACAGACTG 57.682 36.000 0.00 0.00 0.00 3.51
1477 1624 7.934855 AAGAAAATCTCATTATGCACAGACT 57.065 32.000 0.00 0.00 0.00 3.24
1478 1625 8.976986 AAAAGAAAATCTCATTATGCACAGAC 57.023 30.769 0.00 0.00 0.00 3.51
1502 1649 6.017440 GCATCGCCTAATAAATGGAGTGTTAA 60.017 38.462 0.00 0.00 0.00 2.01
1521 1668 1.400242 GCAATCGGAATTAGGCATCGC 60.400 52.381 0.00 0.00 0.00 4.58
1523 1670 3.988379 TTGCAATCGGAATTAGGCATC 57.012 42.857 0.00 0.00 0.00 3.91
1529 1676 9.681692 CATCAAATCTAATTGCAATCGGAATTA 57.318 29.630 13.38 0.00 40.93 1.40
1531 1678 7.944061 TCATCAAATCTAATTGCAATCGGAAT 58.056 30.769 13.38 4.52 34.13 3.01
1532 1679 7.332213 TCATCAAATCTAATTGCAATCGGAA 57.668 32.000 13.38 0.00 0.00 4.30
1533 1680 6.940831 TCATCAAATCTAATTGCAATCGGA 57.059 33.333 13.38 13.76 0.00 4.55
1534 1681 7.990541 TTTCATCAAATCTAATTGCAATCGG 57.009 32.000 13.38 8.70 0.00 4.18
1595 1742 4.101448 AGCGCGCTTCCCATTCCT 62.101 61.111 31.32 0.91 0.00 3.36
1610 1757 1.067846 TGACCACACAGTGTATCGAGC 60.068 52.381 5.69 0.00 0.00 5.03
1616 1763 5.427378 CCATATGATTGACCACACAGTGTA 58.573 41.667 5.69 0.00 0.00 2.90
1620 1767 3.216800 CCCCATATGATTGACCACACAG 58.783 50.000 3.65 0.00 0.00 3.66
1625 1772 3.395054 TTTGCCCCATATGATTGACCA 57.605 42.857 3.65 0.00 0.00 4.02
1628 1775 4.352009 ACTGTTTTGCCCCATATGATTGA 58.648 39.130 3.65 0.00 0.00 2.57
1673 1820 2.035632 AGAACGAAGATAGCCCTCTGG 58.964 52.381 0.00 0.00 0.00 3.86
1793 1940 1.003112 AATCAACAGCCGGGCGTAA 60.003 52.632 14.39 7.30 0.00 3.18
1803 1950 3.365364 GCGAAAAGACCAGGAATCAACAG 60.365 47.826 0.00 0.00 0.00 3.16
1946 2093 0.606604 TGTAGCCAAGACCGGAACTC 59.393 55.000 9.46 0.00 0.00 3.01
1948 2095 0.606604 TCTGTAGCCAAGACCGGAAC 59.393 55.000 9.46 0.99 0.00 3.62
1997 2144 5.651576 TGCTAGCAATATCACATTGAACCAA 59.348 36.000 16.84 0.00 0.00 3.67
2063 2210 2.610859 ACCGCCCTTGACCATCCT 60.611 61.111 0.00 0.00 0.00 3.24
2111 2258 6.006449 GGTCATAAATGTAGATGGAATGGCT 58.994 40.000 0.00 0.00 0.00 4.75
2159 2306 6.655078 ATTAGTCAGACATTGCTTTTTGGT 57.345 33.333 2.66 0.00 0.00 3.67
2167 2314 9.319143 ACAAGATACTTATTAGTCAGACATTGC 57.681 33.333 2.66 0.00 35.78 3.56
2201 2348 5.126545 ACTTTTCACCCAGTTGTAAAGGAAC 59.873 40.000 7.02 0.00 37.88 3.62
2203 2350 4.642885 CACTTTTCACCCAGTTGTAAAGGA 59.357 41.667 7.02 0.00 37.88 3.36
2204 2351 4.642885 TCACTTTTCACCCAGTTGTAAAGG 59.357 41.667 7.02 0.00 37.88 3.11
2234 2381 6.003950 TCCATGAAGAAAGAAGGTGGTAAAG 58.996 40.000 0.00 0.00 0.00 1.85
2246 2393 5.520376 AACAACCAGTTCCATGAAGAAAG 57.480 39.130 0.00 0.00 34.74 2.62
2271 2421 5.865085 TCCAAGCTGAACTATGTTGTAAGT 58.135 37.500 0.00 0.00 0.00 2.24
2275 2425 4.357918 ACTCCAAGCTGAACTATGTTGT 57.642 40.909 0.00 0.00 0.00 3.32
2279 2429 4.437239 CCAGTACTCCAAGCTGAACTATG 58.563 47.826 0.00 0.00 32.39 2.23
2545 2695 8.648698 TGATTATCACAAGAAATGGAAAAGGA 57.351 30.769 0.00 0.00 0.00 3.36
2571 2721 8.474831 TGTCAAGCTAGCTAACATTATACTTCA 58.525 33.333 19.70 0.00 0.00 3.02
2600 2755 5.142962 GCATAATCAAGTATCTGAAAGCGC 58.857 41.667 0.00 0.00 0.00 5.92
2650 2811 9.078990 TGTATAAACCATCCACATTGTGTTTAA 57.921 29.630 15.34 0.00 33.46 1.52
3149 3317 2.092968 TCAGGGGACTATGCAACATGAC 60.093 50.000 0.00 0.00 40.21 3.06
3208 3376 5.105797 TGCTATTCAAAGGTAACATGCTTGG 60.106 40.000 4.44 0.00 41.41 3.61
3224 3392 4.426736 TCAATCTGATGGCTGCTATTCA 57.573 40.909 0.00 0.15 0.00 2.57
3231 3399 5.578005 ATTGAAGTTCAATCTGATGGCTG 57.422 39.130 22.70 0.00 43.03 4.85
3410 3581 7.246311 AGAAATATCAACTGCAATTTCTCGTG 58.754 34.615 13.54 0.00 42.24 4.35
3411 3582 7.383102 AGAAATATCAACTGCAATTTCTCGT 57.617 32.000 13.54 0.00 42.24 4.18
3499 3670 1.871080 AGGGCGATTTAGCTTCATCG 58.129 50.000 18.35 18.35 44.24 3.84
3767 3942 2.659063 CCCGTGCAGGAGATGGTGA 61.659 63.158 8.24 0.00 45.00 4.02
3783 3958 3.906846 AGATGGTGGATGAGAAGTATCCC 59.093 47.826 0.00 0.00 42.79 3.85
3849 4024 3.485431 CTTGCAGTGCGCCTCTCG 61.485 66.667 11.20 0.34 41.33 4.04
3867 4042 2.022129 CTTCGACACGGTGAGCCAC 61.022 63.158 16.29 0.00 34.09 5.01
3992 4167 2.190578 GGCTCTGCCCTATTGCGT 59.809 61.111 0.00 0.00 44.06 5.24
4083 4258 0.955428 GGACTTGCCTCGTCATTGCA 60.955 55.000 0.00 0.00 33.11 4.08
4218 4393 1.679139 CTTTCAGCACCACCACAAGA 58.321 50.000 0.00 0.00 0.00 3.02
4427 4602 5.124617 AGGCGGAGAAAATCTTCTGAAATTC 59.875 40.000 0.00 0.00 42.19 2.17
4436 4611 1.726853 CACGAGGCGGAGAAAATCTT 58.273 50.000 0.00 0.00 0.00 2.40
4456 4631 3.349927 TCATCCTTCCAATGCTTCACAG 58.650 45.455 0.00 0.00 0.00 3.66
4561 4736 4.749099 CCTGAACATAGAGCAAGAGTATGC 59.251 45.833 0.00 0.00 46.78 3.14
4614 4789 1.667830 TGCGTGTTCTGTAGCAGGC 60.668 57.895 0.00 0.00 43.97 4.85
4621 4796 2.031682 GCTGAAATTCTGCGTGTTCTGT 60.032 45.455 9.01 0.00 31.90 3.41
4644 4819 6.912591 AGTTCTGTTGAAATTTAGAGTTTGCG 59.087 34.615 0.00 0.00 33.52 4.85
4657 4832 2.030371 TGGCATGCAGTTCTGTTGAAA 58.970 42.857 21.36 0.00 33.52 2.69
4681 4856 7.264947 TCTGTTTTCTCTTCCCAAAACAATTC 58.735 34.615 10.30 0.00 46.60 2.17
4734 4909 1.868997 CGTGCATCCACAGGTGAAC 59.131 57.895 0.00 0.00 42.17 3.18
4737 4912 3.792047 CGCGTGCATCCACAGGTG 61.792 66.667 0.00 0.00 42.17 4.00
4871 5047 4.953940 AAGCCTGAGGAGAGATACATTC 57.046 45.455 0.65 0.00 0.00 2.67
4904 5084 4.635765 CACGAGATTTTTATTGGCTCAGGA 59.364 41.667 0.00 0.00 0.00 3.86
4913 5093 7.425606 ACAAGACAAAGCACGAGATTTTTATT 58.574 30.769 0.00 0.00 29.40 1.40
4990 5170 2.614259 TCAGGAGATATCCAAGGGAGC 58.386 52.381 9.50 0.00 34.05 4.70
4992 5172 3.407540 AGGATCAGGAGATATCCAAGGGA 59.592 47.826 9.50 0.96 43.55 4.20
4994 5174 4.423913 TCAGGATCAGGAGATATCCAAGG 58.576 47.826 9.50 0.00 43.55 3.61
4996 5176 4.423913 CCTCAGGATCAGGAGATATCCAA 58.576 47.826 9.50 0.00 43.55 3.53
5035 5215 7.456253 CACGAGTTGGTCATAAAAGAATACAG 58.544 38.462 0.00 0.00 0.00 2.74
5047 5227 0.320771 GGAGTGCACGAGTTGGTCAT 60.321 55.000 12.01 0.00 0.00 3.06
5385 5567 3.553096 CCTGAAGCATACCTAAGTAGCCG 60.553 52.174 0.00 0.00 0.00 5.52
5386 5568 3.388350 ACCTGAAGCATACCTAAGTAGCC 59.612 47.826 0.00 0.00 0.00 3.93
5387 5569 4.372656 CACCTGAAGCATACCTAAGTAGC 58.627 47.826 0.00 0.00 0.00 3.58
5388 5570 4.100189 AGCACCTGAAGCATACCTAAGTAG 59.900 45.833 0.00 0.00 0.00 2.57
5389 5571 4.030913 AGCACCTGAAGCATACCTAAGTA 58.969 43.478 0.00 0.00 0.00 2.24
5390 5572 2.840651 AGCACCTGAAGCATACCTAAGT 59.159 45.455 0.00 0.00 0.00 2.24
5391 5573 3.118629 TGAGCACCTGAAGCATACCTAAG 60.119 47.826 0.00 0.00 0.00 2.18
5392 5574 2.837591 TGAGCACCTGAAGCATACCTAA 59.162 45.455 0.00 0.00 0.00 2.69
5393 5575 2.466846 TGAGCACCTGAAGCATACCTA 58.533 47.619 0.00 0.00 0.00 3.08
5394 5576 1.279496 TGAGCACCTGAAGCATACCT 58.721 50.000 0.00 0.00 0.00 3.08
5395 5577 2.012673 CTTGAGCACCTGAAGCATACC 58.987 52.381 0.00 0.00 0.00 2.73
5456 5638 4.638421 TCAAAGAAAATGACGTGTCTTGGT 59.362 37.500 0.00 0.00 30.85 3.67
5573 5755 3.993736 ACCAGTTTGTTTCTTTGCACAAC 59.006 39.130 0.00 0.00 32.57 3.32
5642 5824 9.309516 CAATTGATCTGTTTAAATTGATCTGGG 57.690 33.333 22.40 12.61 40.73 4.45
5817 6006 4.627035 GTGTTCGATGATGTGATCAGACAA 59.373 41.667 0.00 0.00 43.53 3.18
5846 6036 4.645136 ACATCTACAAGCTATCTGTTCGGA 59.355 41.667 0.00 0.00 0.00 4.55
5849 6039 5.907207 TCCACATCTACAAGCTATCTGTTC 58.093 41.667 0.00 0.00 0.00 3.18
5856 6046 4.290093 AGGTGATCCACATCTACAAGCTA 58.710 43.478 0.00 0.00 38.30 3.32
5871 6061 7.558161 TGATTTGTAATGTGATGAGGTGATC 57.442 36.000 0.00 0.00 0.00 2.92
6048 6238 0.251698 TGGCACTGCAAATGGGATCA 60.252 50.000 2.82 0.00 0.00 2.92
6150 7441 2.440599 GACCATGCCCCCTGTTGT 59.559 61.111 0.00 0.00 0.00 3.32
6212 7503 1.856629 ATTTTCGGACGGAGGGAGTA 58.143 50.000 0.00 0.00 0.00 2.59
6213 7504 1.479730 GTATTTTCGGACGGAGGGAGT 59.520 52.381 0.00 0.00 0.00 3.85
6214 7505 1.755380 AGTATTTTCGGACGGAGGGAG 59.245 52.381 0.00 0.00 0.00 4.30
6215 7506 1.856629 AGTATTTTCGGACGGAGGGA 58.143 50.000 0.00 0.00 0.00 4.20
6216 7507 2.277084 CAAGTATTTTCGGACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
6217 7508 2.928116 GACAAGTATTTTCGGACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
6218 7509 3.581755 TGACAAGTATTTTCGGACGGAG 58.418 45.455 0.00 0.00 0.00 4.63
6219 7510 3.663995 TGACAAGTATTTTCGGACGGA 57.336 42.857 0.00 0.00 0.00 4.69
6220 7511 3.930229 TGATGACAAGTATTTTCGGACGG 59.070 43.478 0.00 0.00 0.00 4.79
6221 7512 5.524511 TTGATGACAAGTATTTTCGGACG 57.475 39.130 0.00 0.00 0.00 4.79
6222 7513 7.326063 CCTTTTTGATGACAAGTATTTTCGGAC 59.674 37.037 0.00 0.00 37.32 4.79
6223 7514 7.229707 TCCTTTTTGATGACAAGTATTTTCGGA 59.770 33.333 0.00 0.00 37.32 4.55
6224 7515 7.326063 GTCCTTTTTGATGACAAGTATTTTCGG 59.674 37.037 0.00 0.00 37.32 4.30
6225 7516 7.860373 TGTCCTTTTTGATGACAAGTATTTTCG 59.140 33.333 0.00 0.00 36.16 3.46
6226 7517 9.528018 TTGTCCTTTTTGATGACAAGTATTTTC 57.472 29.630 0.00 0.00 42.36 2.29
6227 7518 9.883142 TTTGTCCTTTTTGATGACAAGTATTTT 57.117 25.926 0.00 0.00 46.27 1.82
6228 7519 9.883142 TTTTGTCCTTTTTGATGACAAGTATTT 57.117 25.926 0.00 0.00 46.27 1.40
6229 7520 9.883142 TTTTTGTCCTTTTTGATGACAAGTATT 57.117 25.926 0.00 0.00 46.27 1.89
6230 7521 9.533253 CTTTTTGTCCTTTTTGATGACAAGTAT 57.467 29.630 0.00 0.00 46.27 2.12
6231 7522 7.978975 CCTTTTTGTCCTTTTTGATGACAAGTA 59.021 33.333 0.00 0.00 46.27 2.24
6232 7523 6.818142 CCTTTTTGTCCTTTTTGATGACAAGT 59.182 34.615 0.00 0.00 46.27 3.16
6233 7524 6.258507 CCCTTTTTGTCCTTTTTGATGACAAG 59.741 38.462 0.00 0.00 46.27 3.16
6234 7525 6.070538 TCCCTTTTTGTCCTTTTTGATGACAA 60.071 34.615 0.00 0.00 44.70 3.18
6235 7526 5.423610 TCCCTTTTTGTCCTTTTTGATGACA 59.576 36.000 0.00 0.00 37.24 3.58
6236 7527 5.912892 TCCCTTTTTGTCCTTTTTGATGAC 58.087 37.500 0.00 0.00 0.00 3.06
6237 7528 6.099557 ACATCCCTTTTTGTCCTTTTTGATGA 59.900 34.615 0.00 0.00 32.39 2.92
6238 7529 6.290605 ACATCCCTTTTTGTCCTTTTTGATG 58.709 36.000 0.00 0.00 33.80 3.07
6239 7530 6.499106 ACATCCCTTTTTGTCCTTTTTGAT 57.501 33.333 0.00 0.00 0.00 2.57
6240 7531 5.948742 ACATCCCTTTTTGTCCTTTTTGA 57.051 34.783 0.00 0.00 0.00 2.69
6241 7532 7.670364 AGATACATCCCTTTTTGTCCTTTTTG 58.330 34.615 0.00 0.00 0.00 2.44
6242 7533 7.855784 AGATACATCCCTTTTTGTCCTTTTT 57.144 32.000 0.00 0.00 0.00 1.94
6243 7534 8.390921 TCTAGATACATCCCTTTTTGTCCTTTT 58.609 33.333 0.00 0.00 0.00 2.27
6244 7535 7.928873 TCTAGATACATCCCTTTTTGTCCTTT 58.071 34.615 0.00 0.00 0.00 3.11
6245 7536 7.510675 TCTAGATACATCCCTTTTTGTCCTT 57.489 36.000 0.00 0.00 0.00 3.36
6246 7537 7.182930 AGTTCTAGATACATCCCTTTTTGTCCT 59.817 37.037 0.00 0.00 0.00 3.85
6247 7538 7.339482 AGTTCTAGATACATCCCTTTTTGTCC 58.661 38.462 0.00 0.00 0.00 4.02
6248 7539 9.886132 TTAGTTCTAGATACATCCCTTTTTGTC 57.114 33.333 0.00 0.00 0.00 3.18
6270 7561 9.845214 AGGGGATGTATCTAGATGTATTTTAGT 57.155 33.333 15.79 0.00 0.00 2.24
6278 7569 9.170890 TGAATAAAAGGGGATGTATCTAGATGT 57.829 33.333 15.79 1.25 0.00 3.06
6284 7575 9.713684 TCAAAATGAATAAAAGGGGATGTATCT 57.286 29.630 0.00 0.00 0.00 1.98
6287 7578 9.486123 TCATCAAAATGAATAAAAGGGGATGTA 57.514 29.630 0.00 0.00 38.97 2.29
6288 7579 8.260114 GTCATCAAAATGAATAAAAGGGGATGT 58.740 33.333 0.00 0.00 43.42 3.06
6289 7580 8.259411 TGTCATCAAAATGAATAAAAGGGGATG 58.741 33.333 0.00 0.00 43.42 3.51
6290 7581 8.378115 TGTCATCAAAATGAATAAAAGGGGAT 57.622 30.769 0.00 0.00 43.42 3.85
6291 7582 7.789202 TGTCATCAAAATGAATAAAAGGGGA 57.211 32.000 0.00 0.00 43.42 4.81
6292 7583 8.096414 ACTTGTCATCAAAATGAATAAAAGGGG 58.904 33.333 0.00 0.00 43.42 4.79
6300 7591 7.975616 CCGGAAATACTTGTCATCAAAATGAAT 59.024 33.333 0.00 0.00 43.42 2.57
6301 7592 7.175816 TCCGGAAATACTTGTCATCAAAATGAA 59.824 33.333 0.00 0.00 43.42 2.57
6302 7593 6.657117 TCCGGAAATACTTGTCATCAAAATGA 59.343 34.615 0.00 0.00 39.63 2.57
6303 7594 6.747280 GTCCGGAAATACTTGTCATCAAAATG 59.253 38.462 5.23 0.00 32.87 2.32
6304 7595 6.403200 CGTCCGGAAATACTTGTCATCAAAAT 60.403 38.462 5.23 0.00 32.87 1.82
6305 7596 5.106869 CGTCCGGAAATACTTGTCATCAAAA 60.107 40.000 5.23 0.00 32.87 2.44
6306 7597 4.390603 CGTCCGGAAATACTTGTCATCAAA 59.609 41.667 5.23 0.00 32.87 2.69
6307 7598 3.930229 CGTCCGGAAATACTTGTCATCAA 59.070 43.478 5.23 0.00 0.00 2.57
6308 7599 3.517602 CGTCCGGAAATACTTGTCATCA 58.482 45.455 5.23 0.00 0.00 3.07
6309 7600 2.864343 CCGTCCGGAAATACTTGTCATC 59.136 50.000 5.23 0.00 37.50 2.92
6310 7601 2.498481 TCCGTCCGGAAATACTTGTCAT 59.502 45.455 5.23 0.00 42.05 3.06
6311 7602 1.894466 TCCGTCCGGAAATACTTGTCA 59.106 47.619 5.23 0.00 42.05 3.58
6312 7603 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
6313 7604 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
6314 7605 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
6315 7606 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
6316 7607 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
6317 7608 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
6318 7609 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
6319 7610 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
6320 7611 0.967380 GTACTCCCTCCGTCCGGAAA 60.967 60.000 5.23 0.00 44.66 3.13
6321 7612 1.379044 GTACTCCCTCCGTCCGGAA 60.379 63.158 5.23 0.00 44.66 4.30
6322 7613 1.856539 AAGTACTCCCTCCGTCCGGA 61.857 60.000 0.00 0.00 42.90 5.14
6323 7614 0.107017 TAAGTACTCCCTCCGTCCGG 60.107 60.000 0.00 0.00 0.00 5.14
6324 7615 1.755179 TTAAGTACTCCCTCCGTCCG 58.245 55.000 0.00 0.00 0.00 4.79
6325 7616 4.321824 GCATATTAAGTACTCCCTCCGTCC 60.322 50.000 0.00 0.00 0.00 4.79
6326 7617 4.523558 AGCATATTAAGTACTCCCTCCGTC 59.476 45.833 0.00 0.00 0.00 4.79
6327 7618 4.481072 AGCATATTAAGTACTCCCTCCGT 58.519 43.478 0.00 0.00 0.00 4.69
6328 7619 5.010719 TGAAGCATATTAAGTACTCCCTCCG 59.989 44.000 0.00 0.00 0.00 4.63
6329 7620 6.420913 TGAAGCATATTAAGTACTCCCTCC 57.579 41.667 0.00 0.00 0.00 4.30
6330 7621 8.778358 CATTTGAAGCATATTAAGTACTCCCTC 58.222 37.037 0.00 0.00 0.00 4.30
6331 7622 7.721399 CCATTTGAAGCATATTAAGTACTCCCT 59.279 37.037 0.00 0.00 0.00 4.20
6332 7623 7.522236 GCCATTTGAAGCATATTAAGTACTCCC 60.522 40.741 0.00 0.00 0.00 4.30
6333 7624 7.363431 GCCATTTGAAGCATATTAAGTACTCC 58.637 38.462 0.00 0.00 0.00 3.85
6334 7625 7.013274 TGGCCATTTGAAGCATATTAAGTACTC 59.987 37.037 0.00 0.00 0.00 2.59
6335 7626 6.833416 TGGCCATTTGAAGCATATTAAGTACT 59.167 34.615 0.00 0.00 0.00 2.73
6336 7627 6.918022 GTGGCCATTTGAAGCATATTAAGTAC 59.082 38.462 9.72 0.00 0.00 2.73
6472 7765 8.843262 TCTCATATGAAGGCAAATCTAATGTTG 58.157 33.333 6.90 0.00 0.00 3.33
6504 7797 9.705103 ATTCTCATATGAAGGATTCCTCAAAAA 57.295 29.630 5.48 0.00 46.93 1.94
6519 7812 9.488762 ACGGGGTAGATTATTATTCTCATATGA 57.511 33.333 5.07 5.07 0.00 2.15
6520 7813 9.534565 CACGGGGTAGATTATTATTCTCATATG 57.465 37.037 0.00 0.00 0.00 1.78
6521 7814 9.268282 ACACGGGGTAGATTATTATTCTCATAT 57.732 33.333 0.00 0.00 0.00 1.78
6522 7815 8.660295 ACACGGGGTAGATTATTATTCTCATA 57.340 34.615 0.00 0.00 0.00 2.15
6523 7816 7.554959 ACACGGGGTAGATTATTATTCTCAT 57.445 36.000 0.00 0.00 0.00 2.90
6524 7817 6.989155 ACACGGGGTAGATTATTATTCTCA 57.011 37.500 0.00 0.00 0.00 3.27
6525 7818 7.093858 AGCTACACGGGGTAGATTATTATTCTC 60.094 40.741 21.24 0.00 46.13 2.87
6669 7969 5.344207 GGATACCAAAAGCATAGTAAGCG 57.656 43.478 0.00 0.00 37.01 4.68
6715 8015 2.224066 CCTTACCGCCGATCTTCAGAAT 60.224 50.000 0.00 0.00 0.00 2.40
6729 8029 3.802948 AACATAGAGCTCACCTTACCG 57.197 47.619 17.77 0.00 0.00 4.02
6738 8038 7.137426 CCAGAATTGCATAAAACATAGAGCTC 58.863 38.462 5.27 5.27 0.00 4.09
6741 8041 7.255381 CCTCCCAGAATTGCATAAAACATAGAG 60.255 40.741 0.00 0.00 0.00 2.43
6743 8043 6.547141 TCCTCCCAGAATTGCATAAAACATAG 59.453 38.462 0.00 0.00 0.00 2.23
6771 8076 0.751277 CAGGCAGAACCCACACAACA 60.751 55.000 0.00 0.00 40.58 3.33
6778 8083 2.356125 GCTAGAATTCAGGCAGAACCCA 60.356 50.000 8.44 0.00 39.49 4.51
6805 8110 2.592993 CCCTGCCACGGAAAGGAGA 61.593 63.158 6.79 0.00 32.43 3.71
6814 8119 3.365265 GCCAAAGTCCCTGCCACG 61.365 66.667 0.00 0.00 0.00 4.94
6824 8129 3.956199 CACATATGATTCCCAGCCAAAGT 59.044 43.478 10.38 0.00 0.00 2.66
6848 8153 6.650807 GCAGAGCTAATATTTGCACTACCATA 59.349 38.462 21.26 0.00 34.99 2.74
6864 8169 2.941064 GCATCATCACAAGCAGAGCTAA 59.059 45.455 0.00 0.00 38.25 3.09
6919 8224 6.479006 TCATCCAATTTCATCAACAGAGAGT 58.521 36.000 0.00 0.00 0.00 3.24
7007 8510 0.463295 CTATGTCCTGCCCTGCTGTG 60.463 60.000 0.00 0.00 0.00 3.66
7021 8524 1.069204 CCGACACTGCTATGGCTATGT 59.931 52.381 9.84 9.84 38.97 2.29
7029 8532 0.392998 CTTTGGCCCGACACTGCTAT 60.393 55.000 0.00 0.00 0.00 2.97
7039 8542 2.759560 CATTCCCCCTTTGGCCCG 60.760 66.667 0.00 0.00 0.00 6.13
7043 8546 0.832626 GCATTCCATTCCCCCTTTGG 59.167 55.000 0.00 0.00 0.00 3.28
7045 8548 1.571955 GTGCATTCCATTCCCCCTTT 58.428 50.000 0.00 0.00 0.00 3.11
7048 8551 2.127232 CGGTGCATTCCATTCCCCC 61.127 63.158 0.00 0.00 0.00 5.40
7055 8558 0.740149 GCATTCATCGGTGCATTCCA 59.260 50.000 0.00 0.00 40.94 3.53
7070 8573 9.573133 GTAATTTACAAAGACTAATGCTGCATT 57.427 29.630 28.55 28.55 37.80 3.56
7124 8637 4.037446 AGCGGAAACAAGAACTGCATTTTA 59.963 37.500 0.00 0.00 38.24 1.52
7125 8638 3.123050 GCGGAAACAAGAACTGCATTTT 58.877 40.909 0.00 0.00 36.16 1.82
7163 8677 9.319060 AGGCTAATGATCGATATGGATATGTAT 57.681 33.333 0.00 0.00 0.00 2.29
7164 8678 8.712228 AGGCTAATGATCGATATGGATATGTA 57.288 34.615 0.00 0.00 0.00 2.29
7222 8736 5.821470 AGCAGATTCAATCATACCAGACTTG 59.179 40.000 0.00 0.00 0.00 3.16
7246 8760 0.611200 CCCTGTATGGTGGTCGTGAA 59.389 55.000 0.00 0.00 0.00 3.18
7251 8765 0.394352 CAAGGCCCTGTATGGTGGTC 60.394 60.000 0.00 0.00 0.00 4.02
7431 8953 4.030529 GTGACATTCACGCAAATGTTATGC 59.969 41.667 14.89 5.59 46.99 3.14
7454 8976 8.355913 GGCCTTTTCTCTAAATATCAGAAATGG 58.644 37.037 15.97 15.97 45.58 3.16
7513 9205 8.143193 TGTTACCTTTTCAACTGTATCGAACTA 58.857 33.333 0.00 0.00 0.00 2.24
7518 9210 7.112984 GCTTTTGTTACCTTTTCAACTGTATCG 59.887 37.037 0.00 0.00 0.00 2.92
7571 9264 8.654485 TTATCCTTGGTTGTAGACTTGTAGTA 57.346 34.615 0.00 0.00 0.00 1.82
7623 9327 4.630644 ATGTAGCATCTACCTTGATGGG 57.369 45.455 6.62 0.00 42.82 4.00
7628 9332 6.932356 ATGTTCAATGTAGCATCTACCTTG 57.068 37.500 12.65 12.65 0.00 3.61
7641 9355 7.596248 GCATCAAGTTTGAACTATGTTCAATGT 59.404 33.333 21.44 12.07 41.13 2.71
7647 9361 6.435277 AGATGGCATCAAGTTTGAACTATGTT 59.565 34.615 27.93 0.00 41.13 2.71
7666 9383 6.145338 AGAAATGATGACATTCAAGATGGC 57.855 37.500 0.00 0.00 44.67 4.40
7695 9412 2.094182 AGCATCTACGTTACTGGTGGTG 60.094 50.000 0.00 0.00 0.00 4.17
7834 9771 8.808529 CACAGATATACTAAAGGTTTCTGAACG 58.191 37.037 4.21 0.00 36.61 3.95
7859 9796 7.686438 ATGTGCACAGTTAGTATTTCATTCA 57.314 32.000 25.84 0.00 0.00 2.57
7869 9806 3.492102 AGGTGAATGTGCACAGTTAGT 57.508 42.857 25.84 4.67 40.52 2.24
7890 9852 5.175859 CGATGGTAAGTATGGAAACTGTGT 58.824 41.667 0.00 0.00 0.00 3.72
7906 9868 2.174210 AGGACCAGTAGTAGCGATGGTA 59.826 50.000 0.00 0.00 45.92 3.25
7910 9872 2.025155 CACAGGACCAGTAGTAGCGAT 58.975 52.381 0.00 0.00 0.00 4.58
7912 9874 0.456221 CCACAGGACCAGTAGTAGCG 59.544 60.000 0.00 0.00 0.00 4.26
7913 9875 1.558233 ACCACAGGACCAGTAGTAGC 58.442 55.000 0.00 0.00 0.00 3.58
7930 9915 2.547826 GATGGTTTAGTGTCGCCTACC 58.452 52.381 0.00 0.00 0.00 3.18
7977 9962 1.405661 GCAGCTTTCGCTTACCTACCT 60.406 52.381 0.00 0.00 46.47 3.08
8015 10000 9.082313 ACAGCTTTTACTTACCAACTACTACTA 57.918 33.333 0.00 0.00 0.00 1.82
8016 10001 7.871463 CACAGCTTTTACTTACCAACTACTACT 59.129 37.037 0.00 0.00 0.00 2.57
8017 10002 7.117379 CCACAGCTTTTACTTACCAACTACTAC 59.883 40.741 0.00 0.00 0.00 2.73
8201 10201 2.514824 GCAACGGGAGAGGGATGC 60.515 66.667 0.00 0.00 0.00 3.91
8236 10236 2.928801 TAGCATATGGTCACGGCAAT 57.071 45.000 11.40 0.00 0.00 3.56


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.