Multiple sequence alignment - TraesCS7B01G308300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G308300 chr7B 100.000 5132 0 0 1 5132 552130983 552125852 0.000000e+00 9478.0
1 TraesCS7B01G308300 chr7B 98.095 105 1 1 4677 4781 552126195 552126092 1.140000e-41 182.0
2 TraesCS7B01G308300 chr7B 98.095 105 1 1 4789 4892 552126307 552126203 1.140000e-41 182.0
3 TraesCS7B01G308300 chr7B 96.939 98 3 0 4925 5022 552125961 552125864 1.140000e-36 165.0
4 TraesCS7B01G308300 chr7B 96.939 98 3 0 5023 5120 552126059 552125962 1.140000e-36 165.0
5 TraesCS7B01G308300 chr7B 93.878 98 6 0 1846 1943 524776149 524776052 1.150000e-31 148.0
6 TraesCS7B01G308300 chr7B 92.958 71 5 0 4872 4942 463617011 463616941 2.530000e-18 104.0
7 TraesCS7B01G308300 chr7B 97.368 38 0 1 3865 3901 650217481 650217444 4.290000e-06 63.9
8 TraesCS7B01G308300 chr7B 100.000 31 0 0 4871 4901 672402432 672402462 2.000000e-04 58.4
9 TraesCS7B01G308300 chr7D 95.595 4518 123 34 1 4467 518798403 518793911 0.000000e+00 7171.0
10 TraesCS7B01G308300 chr7D 93.884 327 10 5 4458 4780 518793757 518793437 7.730000e-133 484.0
11 TraesCS7B01G308300 chr7D 90.598 234 18 2 4789 5022 518793536 518793307 1.790000e-79 307.0
12 TraesCS7B01G308300 chr7D 79.665 418 64 15 3270 3682 215152838 215152437 1.090000e-71 281.0
13 TraesCS7B01G308300 chr7D 80.180 111 21 1 130 239 531113120 531113010 1.180000e-11 82.4
14 TraesCS7B01G308300 chr7A 97.076 1368 32 4 1958 3317 594557048 594555681 0.000000e+00 2298.0
15 TraesCS7B01G308300 chr7A 94.152 1368 38 13 3366 4702 594555685 594554329 0.000000e+00 2045.0
16 TraesCS7B01G308300 chr7A 96.744 952 23 5 906 1850 594557996 594557046 0.000000e+00 1580.0
17 TraesCS7B01G308300 chr7A 93.410 349 9 9 578 920 594558709 594558369 5.930000e-139 505.0
18 TraesCS7B01G308300 chr7A 90.986 355 25 6 202 554 594578336 594577987 6.010000e-129 472.0
19 TraesCS7B01G308300 chr7A 82.301 452 68 10 3205 3651 119502472 119502916 1.040000e-101 381.0
20 TraesCS7B01G308300 chr7A 91.176 102 8 1 1847 1948 503529076 503529176 2.490000e-28 137.0
21 TraesCS7B01G308300 chr7A 94.872 39 1 1 3868 3905 717239578 717239540 5.550000e-05 60.2
22 TraesCS7B01G308300 chr7A 100.000 29 0 0 3900 3928 5779480 5779508 3.000000e-03 54.7
23 TraesCS7B01G308300 chr1B 83.908 348 52 3 3153 3500 668913799 668913456 3.830000e-86 329.0
24 TraesCS7B01G308300 chr1B 91.549 71 6 0 4872 4942 70501974 70502044 1.180000e-16 99.0
25 TraesCS7B01G308300 chr1B 95.000 60 1 2 3869 3926 27084879 27084820 5.470000e-15 93.5
26 TraesCS7B01G308300 chr1B 82.075 106 19 0 148 253 262390423 262390318 1.970000e-14 91.6
27 TraesCS7B01G308300 chr4B 90.728 151 14 0 4872 5022 634724831 634724981 8.710000e-48 202.0
28 TraesCS7B01G308300 chr4B 92.727 110 8 0 5023 5132 634724884 634724993 5.320000e-35 159.0
29 TraesCS7B01G308300 chr6A 94.059 101 5 1 1846 1945 45983731 45983631 8.900000e-33 152.0
30 TraesCS7B01G308300 chr6A 78.195 133 29 0 121 253 31351456 31351588 9.160000e-13 86.1
31 TraesCS7B01G308300 chr4A 92.523 107 7 1 1848 1954 430430463 430430568 8.900000e-33 152.0
32 TraesCS7B01G308300 chr4A 82.090 134 22 2 121 253 584032188 584032320 4.200000e-21 113.0
33 TraesCS7B01G308300 chr6D 84.932 146 21 1 4861 5006 123165700 123165556 4.140000e-31 147.0
34 TraesCS7B01G308300 chr5A 91.919 99 8 0 1851 1949 452118774 452118676 6.930000e-29 139.0
35 TraesCS7B01G308300 chr5A 90.909 99 9 0 1846 1944 476899623 476899721 3.220000e-27 134.0
36 TraesCS7B01G308300 chr1D 90.099 101 9 1 1849 1949 489445999 489445900 4.170000e-26 130.0
37 TraesCS7B01G308300 chr1D 80.282 142 23 5 105 243 298455968 298455829 9.090000e-18 102.0
38 TraesCS7B01G308300 chr1D 97.368 38 0 1 3865 3901 44612305 44612268 4.290000e-06 63.9
39 TraesCS7B01G308300 chr6B 88.119 101 11 1 1847 1947 79349507 79349408 9.030000e-23 119.0
40 TraesCS7B01G308300 chr1A 81.379 145 18 6 4862 5006 554129595 554129730 5.430000e-20 110.0
41 TraesCS7B01G308300 chr2A 84.091 88 9 4 148 233 761881789 761881873 4.260000e-11 80.5
42 TraesCS7B01G308300 chr2A 89.583 48 3 2 3856 3901 617178906 617178859 5.550000e-05 60.2
43 TraesCS7B01G308300 chr5D 86.667 60 5 2 3869 3928 505019738 505019794 4.290000e-06 63.9
44 TraesCS7B01G308300 chr5B 84.483 58 7 2 3870 3927 568406819 568406764 7.180000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G308300 chr7B 552125852 552130983 5131 True 9478 9478 100.0000 1 5132 1 chr7B.!!$R3 5131
1 TraesCS7B01G308300 chr7D 518793307 518798403 5096 True 2654 7171 93.3590 1 5022 3 chr7D.!!$R3 5021
2 TraesCS7B01G308300 chr7A 594554329 594558709 4380 True 1607 2298 95.3455 578 4702 4 chr7A.!!$R3 4124

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
830 839 0.034574 ATTAATGCGAGCCCACCACA 60.035 50.0 0.0 0.0 0.0 4.17 F
1894 2303 0.476338 TAGCGAGCTCATCCCTCTCT 59.524 55.0 15.4 0.0 0.0 3.10 F
2598 3014 1.128200 GGCCCCAAAAACCTGTTCTT 58.872 50.0 0.0 0.0 0.0 2.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2453 2869 0.411452 TTTGCTTATGGGCCTGGGAA 59.589 50.0 4.53 0.0 0.0 3.97 R
3813 4239 2.033801 CCATAATGCTCTTCTTTGGCCG 59.966 50.0 0.00 0.0 0.0 6.13 R
4312 4751 2.437085 TTAGCTCCCTCGACTGATCA 57.563 50.0 0.00 0.0 0.0 2.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 6.910536 AGTGTGTTTTACTCAGAAGAACAG 57.089 37.500 0.00 0.00 31.58 3.16
119 120 7.241042 ACTGCAACCTCTTACATTAGTCTAA 57.759 36.000 0.00 0.00 0.00 2.10
126 127 8.203681 ACCTCTTACATTAGTCTAAGGTTTGT 57.796 34.615 14.60 8.22 34.24 2.83
127 128 8.095169 ACCTCTTACATTAGTCTAAGGTTTGTG 58.905 37.037 14.60 8.93 34.24 3.33
140 141 1.713932 GGTTTGTGAGAAAAATCGCGC 59.286 47.619 0.00 0.00 32.21 6.86
143 144 0.886938 TGTGAGAAAAATCGCGCCCA 60.887 50.000 0.00 0.00 32.21 5.36
206 207 2.031465 ATTCCGGACAACGCGGTT 59.969 55.556 12.47 0.00 42.52 4.44
207 208 2.030958 ATTCCGGACAACGCGGTTC 61.031 57.895 12.47 4.27 42.52 3.62
212 213 2.654912 GGACAACGCGGTTCAGACG 61.655 63.158 12.47 0.00 0.00 4.18
235 236 1.217244 CGGGAGGTTTACGGGTCTG 59.783 63.158 0.00 0.00 0.00 3.51
276 277 1.076559 TTAGATGAGACCCGGGCGA 60.077 57.895 24.08 1.19 0.00 5.54
289 290 1.450312 GGGCGATGTTCCACTGGAG 60.450 63.158 0.00 0.00 31.21 3.86
290 291 1.450312 GGCGATGTTCCACTGGAGG 60.450 63.158 0.00 0.00 31.21 4.30
291 292 1.596934 GCGATGTTCCACTGGAGGA 59.403 57.895 0.00 0.00 35.41 3.71
292 293 0.741221 GCGATGTTCCACTGGAGGAC 60.741 60.000 0.00 0.00 37.42 3.85
293 294 0.898320 CGATGTTCCACTGGAGGACT 59.102 55.000 0.00 0.00 37.42 3.85
325 326 7.361457 TCAAGGAAATACATTCTAGGTCGAT 57.639 36.000 0.00 0.00 38.18 3.59
327 328 8.265055 TCAAGGAAATACATTCTAGGTCGATTT 58.735 33.333 0.00 0.00 38.18 2.17
328 329 8.893727 CAAGGAAATACATTCTAGGTCGATTTT 58.106 33.333 0.00 0.00 38.18 1.82
370 371 1.893137 GGACTTCTCGGCCCAATTTTT 59.107 47.619 0.00 0.00 0.00 1.94
532 533 5.718649 ATAGTGCACACGTTTGATGTATC 57.281 39.130 21.04 0.00 36.20 2.24
549 550 7.375834 TGATGTATCATCCCTAACACGATTAC 58.624 38.462 7.18 0.00 0.00 1.89
553 554 3.067180 TCATCCCTAACACGATTACGACC 59.933 47.826 0.00 0.00 42.66 4.79
554 555 1.401552 TCCCTAACACGATTACGACCG 59.598 52.381 0.00 0.00 42.66 4.79
555 556 1.133025 CCCTAACACGATTACGACCGT 59.867 52.381 0.00 0.00 42.66 4.83
556 557 2.444351 CCTAACACGATTACGACCGTC 58.556 52.381 0.00 0.00 42.66 4.79
557 558 2.159531 CCTAACACGATTACGACCGTCA 60.160 50.000 0.00 0.00 42.66 4.35
558 559 1.689959 AACACGATTACGACCGTCAC 58.310 50.000 0.00 0.00 42.66 3.67
559 560 0.453282 ACACGATTACGACCGTCACG 60.453 55.000 0.00 6.40 42.66 4.35
589 590 2.550606 CAGTGAGCTATAGTCGTCTCCC 59.449 54.545 0.84 0.00 0.00 4.30
827 836 0.751643 ACCATTAATGCGAGCCCACC 60.752 55.000 10.11 0.00 0.00 4.61
828 837 0.751277 CCATTAATGCGAGCCCACCA 60.751 55.000 10.11 0.00 0.00 4.17
830 839 0.034574 ATTAATGCGAGCCCACCACA 60.035 50.000 0.00 0.00 0.00 4.17
831 840 0.034574 TTAATGCGAGCCCACCACAT 60.035 50.000 0.00 0.00 0.00 3.21
1239 1638 5.663556 TCTCTCTTTCCCTCCTAATTTCCTC 59.336 44.000 0.00 0.00 0.00 3.71
1316 1715 1.192803 AGAAGGAGACGGGGGTGAAC 61.193 60.000 0.00 0.00 0.00 3.18
1317 1716 1.152096 AAGGAGACGGGGGTGAACT 60.152 57.895 0.00 0.00 0.00 3.01
1322 1721 1.409427 GAGACGGGGGTGAACTATGAG 59.591 57.143 0.00 0.00 0.00 2.90
1550 1949 1.523711 CTCGTGTGCCCTTGTGTGT 60.524 57.895 0.00 0.00 0.00 3.72
1621 2026 6.601332 TGTAAGCTAGCTAAATATTGCCCTT 58.399 36.000 19.70 0.00 0.00 3.95
1738 2143 1.006102 CGCGAAACTCAGGGAGTGT 60.006 57.895 0.00 0.00 42.59 3.55
1785 2190 2.876581 AGTCCCACCTGTTTTTCCATC 58.123 47.619 0.00 0.00 0.00 3.51
1852 2258 7.464045 CGATCAAATCGCACAATTAGTCTTGTA 60.464 37.037 0.00 0.00 46.55 2.41
1888 2297 1.963679 CCTCCTAGCGAGCTCATCC 59.036 63.158 15.40 0.96 37.27 3.51
1894 2303 0.476338 TAGCGAGCTCATCCCTCTCT 59.524 55.000 15.40 0.00 0.00 3.10
1910 2319 7.113658 TCCCTCTCTTATTAAGTGATGTGAC 57.886 40.000 8.27 0.00 31.36 3.67
1927 2336 2.477375 GTGACGCTGGTTGAATCGTAAA 59.523 45.455 0.00 0.00 35.12 2.01
1934 2347 6.315393 ACGCTGGTTGAATCGTAAATAAAGAT 59.685 34.615 0.00 0.00 33.02 2.40
1987 2402 7.693969 AGTTCATAAGCCATATCCATTTAGC 57.306 36.000 0.00 0.00 0.00 3.09
1992 2407 9.806448 TCATAAGCCATATCCATTTAGCTTAAA 57.194 29.630 6.38 0.00 43.65 1.52
2002 2417 7.817418 TCCATTTAGCTTAAAGTGAACAGTT 57.183 32.000 0.00 0.00 0.00 3.16
2003 2418 7.648142 TCCATTTAGCTTAAAGTGAACAGTTG 58.352 34.615 0.00 0.00 0.00 3.16
2351 2767 7.859325 AAACTACATGTTCAGTGTACAAACT 57.141 32.000 2.30 0.00 38.03 2.66
2444 2860 4.821805 GGTGGACTGAAATTCTTCTGAACA 59.178 41.667 0.00 0.00 35.20 3.18
2453 2869 6.950041 TGAAATTCTTCTGAACATCCCTGATT 59.050 34.615 0.00 0.00 34.71 2.57
2598 3014 1.128200 GGCCCCAAAAACCTGTTCTT 58.872 50.000 0.00 0.00 0.00 2.52
2674 3092 4.330944 TGCCCCGTAAATCTGTAGTATG 57.669 45.455 0.00 0.00 0.00 2.39
3349 3772 4.707030 TTGATGATGCCAACAGTTCATC 57.293 40.909 7.68 7.68 42.99 2.92
3553 3976 8.810652 TGCGTTTTATTCTTAGAGCAAATTTT 57.189 26.923 0.00 0.00 0.00 1.82
3829 4255 0.962356 CCACGGCCAAAGAAGAGCAT 60.962 55.000 2.24 0.00 0.00 3.79
3868 4294 9.512588 AGAGTTGCAATTCCTTTATCCTATATG 57.487 33.333 17.41 0.00 0.00 1.78
3931 4357 5.854010 TTACAGAGGGAGTACTATTGCTG 57.146 43.478 0.00 4.63 0.00 4.41
3990 4416 9.090103 TGGTAGATAGTCCTCTATTGTAAATGG 57.910 37.037 0.00 0.00 37.05 3.16
4177 4616 0.318762 GACCTTCACTCCTCGTGCTT 59.681 55.000 0.00 0.00 43.46 3.91
4312 4751 4.248058 GCAGAAATGCTGGTATGCTTTTT 58.752 39.130 0.00 0.00 45.03 1.94
4468 5080 2.159099 TGAAGTGGTCGAGGCATGTATC 60.159 50.000 0.00 0.00 0.00 2.24
4536 5151 7.878644 ACCTTCTGGTTTATCTTTCTGTTCTAC 59.121 37.037 0.00 0.00 46.05 2.59
4581 5196 2.687935 GCGTAACAATGGATTGGATGGT 59.312 45.455 4.45 0.00 41.96 3.55
4620 5235 2.271497 GCTGCAGCTGGATGGAGT 59.729 61.111 31.33 0.00 40.47 3.85
4697 5314 2.417516 CGAGTAGATGGTGGGCCG 59.582 66.667 0.00 0.00 37.67 6.13
4749 5366 7.208080 GCTTTTGAATGCATTCTCTATCCAAT 58.792 34.615 33.23 0.00 37.67 3.16
4750 5367 7.709613 GCTTTTGAATGCATTCTCTATCCAATT 59.290 33.333 33.23 0.31 37.67 2.32
4751 5368 9.595823 CTTTTGAATGCATTCTCTATCCAATTT 57.404 29.630 33.23 0.00 37.67 1.82
4752 5369 9.947433 TTTTGAATGCATTCTCTATCCAATTTT 57.053 25.926 33.23 0.00 37.67 1.82
4753 5370 9.947433 TTTGAATGCATTCTCTATCCAATTTTT 57.053 25.926 33.23 0.00 37.67 1.94
4780 5397 1.769026 GGAAAAGCTTCCCCTCATCC 58.231 55.000 0.00 0.00 44.91 3.51
4781 5398 1.286257 GGAAAAGCTTCCCCTCATCCT 59.714 52.381 0.00 0.00 44.91 3.24
4782 5399 2.649190 GAAAAGCTTCCCCTCATCCTC 58.351 52.381 0.00 0.00 0.00 3.71
4783 5400 1.978361 AAAGCTTCCCCTCATCCTCT 58.022 50.000 0.00 0.00 0.00 3.69
4784 5401 2.877154 AAGCTTCCCCTCATCCTCTA 57.123 50.000 0.00 0.00 0.00 2.43
4785 5402 3.359110 AAGCTTCCCCTCATCCTCTAT 57.641 47.619 0.00 0.00 0.00 1.98
4786 5403 2.618794 AGCTTCCCCTCATCCTCTATG 58.381 52.381 0.00 0.00 36.88 2.23
4787 5404 1.003003 GCTTCCCCTCATCCTCTATGC 59.997 57.143 0.00 0.00 35.38 3.14
4788 5405 1.627834 CTTCCCCTCATCCTCTATGCC 59.372 57.143 0.00 0.00 35.38 4.40
4789 5406 0.567687 TCCCCTCATCCTCTATGCCA 59.432 55.000 0.00 0.00 35.38 4.92
4790 5407 0.689623 CCCCTCATCCTCTATGCCAC 59.310 60.000 0.00 0.00 35.38 5.01
4791 5408 1.427809 CCCTCATCCTCTATGCCACA 58.572 55.000 0.00 0.00 35.38 4.17
4792 5409 1.071385 CCCTCATCCTCTATGCCACAC 59.929 57.143 0.00 0.00 35.38 3.82
4793 5410 1.269988 CCTCATCCTCTATGCCACACG 60.270 57.143 0.00 0.00 35.38 4.49
4794 5411 1.683385 CTCATCCTCTATGCCACACGA 59.317 52.381 0.00 0.00 35.38 4.35
4795 5412 1.683385 TCATCCTCTATGCCACACGAG 59.317 52.381 0.00 0.00 35.38 4.18
4796 5413 1.410517 CATCCTCTATGCCACACGAGT 59.589 52.381 0.00 0.00 0.00 4.18
4797 5414 2.430248 TCCTCTATGCCACACGAGTA 57.570 50.000 0.00 0.00 0.00 2.59
4798 5415 2.298610 TCCTCTATGCCACACGAGTAG 58.701 52.381 0.00 0.00 0.00 2.57
4799 5416 2.092592 TCCTCTATGCCACACGAGTAGA 60.093 50.000 0.00 0.00 0.00 2.59
4800 5417 2.887783 CCTCTATGCCACACGAGTAGAT 59.112 50.000 0.00 0.00 0.00 1.98
4801 5418 3.304996 CCTCTATGCCACACGAGTAGATG 60.305 52.174 0.00 0.00 0.00 2.90
4802 5419 2.623416 TCTATGCCACACGAGTAGATGG 59.377 50.000 0.00 0.00 34.29 3.51
4803 5420 1.195115 ATGCCACACGAGTAGATGGT 58.805 50.000 0.00 0.00 33.89 3.55
4804 5421 1.842052 TGCCACACGAGTAGATGGTA 58.158 50.000 0.00 0.00 33.89 3.25
4805 5422 1.749063 TGCCACACGAGTAGATGGTAG 59.251 52.381 0.00 0.00 33.89 3.18
4806 5423 1.067212 GCCACACGAGTAGATGGTAGG 59.933 57.143 0.00 0.00 33.89 3.18
4807 5424 1.067212 CCACACGAGTAGATGGTAGGC 59.933 57.143 0.00 0.00 0.00 3.93
4808 5425 1.067212 CACACGAGTAGATGGTAGGCC 59.933 57.143 0.00 0.00 0.00 5.19
4809 5426 0.311165 CACGAGTAGATGGTAGGCCG 59.689 60.000 0.00 0.00 37.67 6.13
4810 5427 0.182061 ACGAGTAGATGGTAGGCCGA 59.818 55.000 0.00 0.00 37.67 5.54
4811 5428 1.315690 CGAGTAGATGGTAGGCCGAA 58.684 55.000 0.00 0.00 37.67 4.30
4812 5429 1.679680 CGAGTAGATGGTAGGCCGAAA 59.320 52.381 0.00 0.00 37.67 3.46
4813 5430 2.287668 CGAGTAGATGGTAGGCCGAAAG 60.288 54.545 0.00 0.00 37.67 2.62
4814 5431 2.957006 GAGTAGATGGTAGGCCGAAAGA 59.043 50.000 0.00 0.00 37.67 2.52
4815 5432 3.371965 AGTAGATGGTAGGCCGAAAGAA 58.628 45.455 0.00 0.00 37.67 2.52
4816 5433 3.773119 AGTAGATGGTAGGCCGAAAGAAA 59.227 43.478 0.00 0.00 37.67 2.52
4817 5434 3.713826 AGATGGTAGGCCGAAAGAAAA 57.286 42.857 0.00 0.00 37.67 2.29
4818 5435 3.344515 AGATGGTAGGCCGAAAGAAAAC 58.655 45.455 0.00 0.00 37.67 2.43
4819 5436 1.900245 TGGTAGGCCGAAAGAAAACC 58.100 50.000 0.00 0.00 37.67 3.27
4820 5437 1.143277 TGGTAGGCCGAAAGAAAACCA 59.857 47.619 0.00 0.00 37.67 3.67
4821 5438 1.810755 GGTAGGCCGAAAGAAAACCAG 59.189 52.381 0.00 0.00 0.00 4.00
4822 5439 1.199327 GTAGGCCGAAAGAAAACCAGC 59.801 52.381 0.00 0.00 0.00 4.85
4823 5440 0.467290 AGGCCGAAAGAAAACCAGCA 60.467 50.000 0.00 0.00 0.00 4.41
4824 5441 0.039165 GGCCGAAAGAAAACCAGCAG 60.039 55.000 0.00 0.00 0.00 4.24
4825 5442 0.039165 GCCGAAAGAAAACCAGCAGG 60.039 55.000 0.00 0.00 42.21 4.85
4826 5443 0.039165 CCGAAAGAAAACCAGCAGGC 60.039 55.000 0.00 0.00 39.06 4.85
4827 5444 0.954452 CGAAAGAAAACCAGCAGGCT 59.046 50.000 0.00 0.00 39.06 4.58
4828 5445 1.338020 CGAAAGAAAACCAGCAGGCTT 59.662 47.619 0.00 0.00 39.06 4.35
4829 5446 2.552315 CGAAAGAAAACCAGCAGGCTTA 59.448 45.455 0.00 0.00 39.06 3.09
4830 5447 3.365364 CGAAAGAAAACCAGCAGGCTTAG 60.365 47.826 0.00 0.00 39.06 2.18
4831 5448 2.206576 AGAAAACCAGCAGGCTTAGG 57.793 50.000 0.00 0.00 39.06 2.69
4832 5449 1.425448 AGAAAACCAGCAGGCTTAGGT 59.575 47.619 0.00 0.00 39.06 3.08
4833 5450 2.158460 AGAAAACCAGCAGGCTTAGGTT 60.158 45.455 9.52 9.52 45.73 3.50
4834 5451 3.073946 AGAAAACCAGCAGGCTTAGGTTA 59.926 43.478 14.24 0.00 43.17 2.85
4835 5452 2.789409 AACCAGCAGGCTTAGGTTAG 57.211 50.000 12.74 0.00 42.23 2.34
4836 5453 0.912486 ACCAGCAGGCTTAGGTTAGG 59.088 55.000 0.00 0.00 39.06 2.69
4837 5454 0.464554 CCAGCAGGCTTAGGTTAGGC 60.465 60.000 0.00 0.00 40.76 3.93
4846 5463 4.998788 GGCTTAGGTTAGGCTTTTGAATG 58.001 43.478 0.00 0.00 37.69 2.67
4847 5464 4.424626 GCTTAGGTTAGGCTTTTGAATGC 58.575 43.478 0.00 0.00 0.00 3.56
4848 5465 4.082245 GCTTAGGTTAGGCTTTTGAATGCA 60.082 41.667 0.00 0.00 0.00 3.96
4849 5466 5.394553 GCTTAGGTTAGGCTTTTGAATGCAT 60.395 40.000 0.00 0.00 0.00 3.96
4850 5467 6.603940 TTAGGTTAGGCTTTTGAATGCATT 57.396 33.333 12.83 12.83 0.00 3.56
4851 5468 5.077134 AGGTTAGGCTTTTGAATGCATTC 57.923 39.130 28.83 28.83 37.31 2.67
4852 5469 4.774200 AGGTTAGGCTTTTGAATGCATTCT 59.226 37.500 33.23 17.86 37.67 2.40
4853 5470 5.105063 GGTTAGGCTTTTGAATGCATTCTC 58.895 41.667 33.23 15.22 37.67 2.87
4854 5471 5.105595 GGTTAGGCTTTTGAATGCATTCTCT 60.106 40.000 33.23 22.49 37.67 3.10
4855 5472 6.095440 GGTTAGGCTTTTGAATGCATTCTCTA 59.905 38.462 33.23 21.73 37.67 2.43
4856 5473 7.201857 GGTTAGGCTTTTGAATGCATTCTCTAT 60.202 37.037 33.23 18.01 37.67 1.98
4857 5474 6.388435 AGGCTTTTGAATGCATTCTCTATC 57.612 37.500 33.23 21.03 37.67 2.08
4858 5475 5.301298 AGGCTTTTGAATGCATTCTCTATCC 59.699 40.000 33.23 26.73 37.67 2.59
4859 5476 5.068198 GGCTTTTGAATGCATTCTCTATCCA 59.932 40.000 33.23 14.50 37.67 3.41
4860 5477 6.406177 GGCTTTTGAATGCATTCTCTATCCAA 60.406 38.462 33.23 18.93 37.67 3.53
4861 5478 7.208080 GCTTTTGAATGCATTCTCTATCCAAT 58.792 34.615 33.23 0.00 37.67 3.16
4862 5479 7.709613 GCTTTTGAATGCATTCTCTATCCAATT 59.290 33.333 33.23 0.31 37.67 2.32
4863 5480 9.595823 CTTTTGAATGCATTCTCTATCCAATTT 57.404 29.630 33.23 0.00 37.67 1.82
4891 5508 1.769026 GGAAAAGCTTCCCCTCATCC 58.231 55.000 0.00 0.00 44.91 3.51
4903 5520 1.349026 CCCTCATCCGGCTGATTACAT 59.651 52.381 8.73 0.00 0.00 2.29
4905 5522 2.613977 CCTCATCCGGCTGATTACATCC 60.614 54.545 8.73 0.00 0.00 3.51
4919 5536 1.308069 ACATCCTGTGCATCAACCGC 61.308 55.000 0.00 0.00 0.00 5.68
4928 5545 3.064324 ATCAACCGCTTGGGCTGC 61.064 61.111 0.00 0.00 40.62 5.25
4943 5560 3.865929 CTGCTTGACGCGTGTCCCT 62.866 63.158 25.28 0.00 44.86 4.20
4944 5561 2.260434 GCTTGACGCGTGTCCCTA 59.740 61.111 25.28 10.53 44.86 3.53
4946 5563 0.101759 GCTTGACGCGTGTCCCTATA 59.898 55.000 25.28 4.26 44.86 1.31
4956 5573 1.128200 TGTCCCTATAAGCCACGCAT 58.872 50.000 0.00 0.00 0.00 4.73
4970 5587 2.046313 CACGCATTCTTGTTGCTGAAC 58.954 47.619 0.00 0.00 37.96 3.18
4979 5596 3.073798 TCTTGTTGCTGAACCTTATCCCA 59.926 43.478 0.00 0.00 0.00 4.37
4993 5610 4.836736 CCTTATCCCATCATGCCTTCATTT 59.163 41.667 0.00 0.00 0.00 2.32
4994 5611 5.306160 CCTTATCCCATCATGCCTTCATTTT 59.694 40.000 0.00 0.00 0.00 1.82
5013 5630 2.119801 TCAGGAAATCTCAGCAAGCC 57.880 50.000 0.00 0.00 0.00 4.35
5017 5634 0.813821 GAAATCTCAGCAAGCCCCAC 59.186 55.000 0.00 0.00 0.00 4.61
5022 5639 3.673484 CAGCAAGCCCCACCAACG 61.673 66.667 0.00 0.00 0.00 4.10
5025 5642 3.673484 CAAGCCCCACCAACGCTG 61.673 66.667 0.00 0.00 31.92 5.18
5029 5646 3.673484 CCCCACCAACGCTGCTTG 61.673 66.667 0.00 1.64 0.00 4.01
5030 5647 2.594303 CCCACCAACGCTGCTTGA 60.594 61.111 11.64 0.00 0.00 3.02
5031 5648 2.639286 CCACCAACGCTGCTTGAC 59.361 61.111 11.64 0.00 0.00 3.18
5032 5649 2.249309 CACCAACGCTGCTTGACG 59.751 61.111 11.64 0.00 0.00 4.35
5033 5650 3.649986 ACCAACGCTGCTTGACGC 61.650 61.111 11.64 0.00 39.77 5.19
5038 5655 4.415501 CGCTGCTTGACGCGTGTC 62.416 66.667 20.70 22.00 44.01 3.67
5039 5656 4.077188 GCTGCTTGACGCGTGTCC 62.077 66.667 25.28 11.36 44.86 4.02
5040 5657 3.414700 CTGCTTGACGCGTGTCCC 61.415 66.667 25.28 14.23 44.86 4.46
5041 5658 3.865929 CTGCTTGACGCGTGTCCCT 62.866 63.158 25.28 0.00 44.86 4.20
5042 5659 3.414700 GCTTGACGCGTGTCCCTG 61.415 66.667 25.28 15.77 44.86 4.45
5043 5660 2.029073 CTTGACGCGTGTCCCTGT 59.971 61.111 25.28 0.00 44.86 4.00
5044 5661 1.287815 CTTGACGCGTGTCCCTGTA 59.712 57.895 25.28 4.26 44.86 2.74
5045 5662 0.319211 CTTGACGCGTGTCCCTGTAA 60.319 55.000 25.28 11.98 44.86 2.41
5046 5663 0.319211 TTGACGCGTGTCCCTGTAAG 60.319 55.000 25.28 0.00 44.86 2.34
5047 5664 2.048503 ACGCGTGTCCCTGTAAGC 60.049 61.111 12.93 0.00 0.00 3.09
5048 5665 2.813908 CGCGTGTCCCTGTAAGCC 60.814 66.667 0.00 0.00 0.00 4.35
5049 5666 2.345991 GCGTGTCCCTGTAAGCCA 59.654 61.111 0.00 0.00 0.00 4.75
5050 5667 2.033194 GCGTGTCCCTGTAAGCCAC 61.033 63.158 0.00 0.00 0.00 5.01
5051 5668 1.736645 CGTGTCCCTGTAAGCCACG 60.737 63.158 0.00 0.00 40.59 4.94
5052 5669 2.033194 GTGTCCCTGTAAGCCACGC 61.033 63.158 0.00 0.00 0.00 5.34
5053 5670 2.345991 GTCCCTGTAAGCCACGCA 59.654 61.111 0.00 0.00 0.00 5.24
5054 5671 1.078426 GTCCCTGTAAGCCACGCAT 60.078 57.895 0.00 0.00 0.00 4.73
5055 5672 0.676782 GTCCCTGTAAGCCACGCATT 60.677 55.000 0.00 0.00 0.00 3.56
5056 5673 0.392461 TCCCTGTAAGCCACGCATTC 60.392 55.000 0.00 0.00 0.00 2.67
5057 5674 0.392998 CCCTGTAAGCCACGCATTCT 60.393 55.000 0.00 0.00 0.00 2.40
5058 5675 1.453155 CCTGTAAGCCACGCATTCTT 58.547 50.000 0.00 0.00 0.00 2.52
5059 5676 1.131126 CCTGTAAGCCACGCATTCTTG 59.869 52.381 0.00 0.00 0.00 3.02
5060 5677 1.806542 CTGTAAGCCACGCATTCTTGT 59.193 47.619 0.00 0.00 0.00 3.16
5061 5678 2.226330 TGTAAGCCACGCATTCTTGTT 58.774 42.857 0.00 0.00 0.00 2.83
5062 5679 2.031245 TGTAAGCCACGCATTCTTGTTG 60.031 45.455 0.00 0.00 0.00 3.33
5063 5680 0.318955 AAGCCACGCATTCTTGTTGC 60.319 50.000 0.00 0.00 36.74 4.17
5064 5681 1.174712 AGCCACGCATTCTTGTTGCT 61.175 50.000 0.00 0.00 37.96 3.91
5065 5682 1.005294 GCCACGCATTCTTGTTGCTG 61.005 55.000 0.00 0.00 37.96 4.41
5066 5683 0.592637 CCACGCATTCTTGTTGCTGA 59.407 50.000 0.00 0.00 37.96 4.26
5067 5684 1.001487 CCACGCATTCTTGTTGCTGAA 60.001 47.619 0.00 0.00 37.96 3.02
5068 5685 2.046313 CACGCATTCTTGTTGCTGAAC 58.954 47.619 0.00 0.00 37.96 3.18
5069 5686 1.001378 ACGCATTCTTGTTGCTGAACC 60.001 47.619 0.00 0.00 37.96 3.62
5070 5687 1.267806 CGCATTCTTGTTGCTGAACCT 59.732 47.619 0.00 0.00 37.96 3.50
5071 5688 2.287788 CGCATTCTTGTTGCTGAACCTT 60.288 45.455 0.00 0.00 37.96 3.50
5072 5689 3.058293 CGCATTCTTGTTGCTGAACCTTA 60.058 43.478 0.00 0.00 37.96 2.69
5073 5690 4.379813 CGCATTCTTGTTGCTGAACCTTAT 60.380 41.667 0.00 0.00 37.96 1.73
5074 5691 5.098211 GCATTCTTGTTGCTGAACCTTATC 58.902 41.667 0.00 0.00 37.14 1.75
5075 5692 5.644644 CATTCTTGTTGCTGAACCTTATCC 58.355 41.667 0.00 0.00 0.00 2.59
5076 5693 3.686016 TCTTGTTGCTGAACCTTATCCC 58.314 45.455 0.00 0.00 0.00 3.85
5077 5694 3.073798 TCTTGTTGCTGAACCTTATCCCA 59.926 43.478 0.00 0.00 0.00 4.37
5078 5695 3.737559 TGTTGCTGAACCTTATCCCAT 57.262 42.857 0.00 0.00 0.00 4.00
5079 5696 3.620488 TGTTGCTGAACCTTATCCCATC 58.380 45.455 0.00 0.00 0.00 3.51
5080 5697 3.010027 TGTTGCTGAACCTTATCCCATCA 59.990 43.478 0.00 0.00 0.00 3.07
5081 5698 4.210331 GTTGCTGAACCTTATCCCATCAT 58.790 43.478 0.00 0.00 0.00 2.45
5082 5699 3.824133 TGCTGAACCTTATCCCATCATG 58.176 45.455 0.00 0.00 0.00 3.07
5083 5700 2.555757 GCTGAACCTTATCCCATCATGC 59.444 50.000 0.00 0.00 0.00 4.06
5084 5701 3.152341 CTGAACCTTATCCCATCATGCC 58.848 50.000 0.00 0.00 0.00 4.40
5085 5702 2.785269 TGAACCTTATCCCATCATGCCT 59.215 45.455 0.00 0.00 0.00 4.75
5086 5703 3.205056 TGAACCTTATCCCATCATGCCTT 59.795 43.478 0.00 0.00 0.00 4.35
5087 5704 3.515602 ACCTTATCCCATCATGCCTTC 57.484 47.619 0.00 0.00 0.00 3.46
5088 5705 2.785269 ACCTTATCCCATCATGCCTTCA 59.215 45.455 0.00 0.00 0.00 3.02
5089 5706 3.400322 ACCTTATCCCATCATGCCTTCAT 59.600 43.478 0.00 0.00 0.00 2.57
5090 5707 4.140853 ACCTTATCCCATCATGCCTTCATT 60.141 41.667 0.00 0.00 0.00 2.57
5091 5708 4.836736 CCTTATCCCATCATGCCTTCATTT 59.163 41.667 0.00 0.00 0.00 2.32
5092 5709 5.047519 CCTTATCCCATCATGCCTTCATTTC 60.048 44.000 0.00 0.00 0.00 2.17
5093 5710 2.669781 TCCCATCATGCCTTCATTTCC 58.330 47.619 0.00 0.00 0.00 3.13
5094 5711 2.024177 TCCCATCATGCCTTCATTTCCA 60.024 45.455 0.00 0.00 0.00 3.53
5095 5712 2.364324 CCCATCATGCCTTCATTTCCAG 59.636 50.000 0.00 0.00 0.00 3.86
5096 5713 2.364324 CCATCATGCCTTCATTTCCAGG 59.636 50.000 0.00 0.00 0.00 4.45
5097 5714 3.293337 CATCATGCCTTCATTTCCAGGA 58.707 45.455 0.00 0.00 30.81 3.86
5098 5715 3.454719 TCATGCCTTCATTTCCAGGAA 57.545 42.857 0.00 0.00 30.81 3.36
5099 5716 3.777087 TCATGCCTTCATTTCCAGGAAA 58.223 40.909 17.33 17.33 35.94 3.13
5100 5717 4.355549 TCATGCCTTCATTTCCAGGAAAT 58.644 39.130 20.35 20.35 42.14 2.17
5101 5718 4.403432 TCATGCCTTCATTTCCAGGAAATC 59.597 41.667 22.79 12.78 39.82 2.17
5102 5719 4.051661 TGCCTTCATTTCCAGGAAATCT 57.948 40.909 22.79 3.31 39.82 2.40
5103 5720 4.419282 TGCCTTCATTTCCAGGAAATCTT 58.581 39.130 22.79 2.55 39.82 2.40
5104 5721 5.579047 TGCCTTCATTTCCAGGAAATCTTA 58.421 37.500 22.79 10.09 39.82 2.10
5105 5722 5.653769 TGCCTTCATTTCCAGGAAATCTTAG 59.346 40.000 22.79 18.13 39.82 2.18
5106 5723 5.451103 GCCTTCATTTCCAGGAAATCTTAGC 60.451 44.000 22.79 18.62 39.82 3.09
5107 5724 5.653769 CCTTCATTTCCAGGAAATCTTAGCA 59.346 40.000 22.79 3.72 39.82 3.49
5108 5725 6.153340 CCTTCATTTCCAGGAAATCTTAGCAA 59.847 38.462 22.79 9.21 39.82 3.91
5109 5726 6.764308 TCATTTCCAGGAAATCTTAGCAAG 57.236 37.500 22.79 10.58 39.82 4.01
5110 5727 5.126061 TCATTTCCAGGAAATCTTAGCAAGC 59.874 40.000 22.79 0.00 39.82 4.01
5111 5728 3.004752 TCCAGGAAATCTTAGCAAGCC 57.995 47.619 0.00 0.00 0.00 4.35
5112 5729 2.027385 CCAGGAAATCTTAGCAAGCCC 58.973 52.381 0.00 0.00 0.00 5.19
5113 5730 2.027385 CAGGAAATCTTAGCAAGCCCC 58.973 52.381 0.00 0.00 0.00 5.80
5114 5731 1.640670 AGGAAATCTTAGCAAGCCCCA 59.359 47.619 0.00 0.00 0.00 4.96
5115 5732 1.751351 GGAAATCTTAGCAAGCCCCAC 59.249 52.381 0.00 0.00 0.00 4.61
5116 5733 1.751351 GAAATCTTAGCAAGCCCCACC 59.249 52.381 0.00 0.00 0.00 4.61
5117 5734 0.704076 AATCTTAGCAAGCCCCACCA 59.296 50.000 0.00 0.00 0.00 4.17
5118 5735 0.704076 ATCTTAGCAAGCCCCACCAA 59.296 50.000 0.00 0.00 0.00 3.67
5119 5736 0.251165 TCTTAGCAAGCCCCACCAAC 60.251 55.000 0.00 0.00 0.00 3.77
5120 5737 1.228737 TTAGCAAGCCCCACCAACC 60.229 57.895 0.00 0.00 0.00 3.77
5121 5738 1.725169 TTAGCAAGCCCCACCAACCT 61.725 55.000 0.00 0.00 0.00 3.50
5122 5739 1.725169 TAGCAAGCCCCACCAACCTT 61.725 55.000 0.00 0.00 0.00 3.50
5123 5740 2.140138 GCAAGCCCCACCAACCTTT 61.140 57.895 0.00 0.00 0.00 3.11
5124 5741 2.049435 CAAGCCCCACCAACCTTTC 58.951 57.895 0.00 0.00 0.00 2.62
5125 5742 1.530655 AAGCCCCACCAACCTTTCG 60.531 57.895 0.00 0.00 0.00 3.46
5126 5743 2.203437 GCCCCACCAACCTTTCGT 60.203 61.111 0.00 0.00 0.00 3.85
5127 5744 2.265904 GCCCCACCAACCTTTCGTC 61.266 63.158 0.00 0.00 0.00 4.20
5128 5745 1.602605 CCCCACCAACCTTTCGTCC 60.603 63.158 0.00 0.00 0.00 4.79
5129 5746 1.454539 CCCACCAACCTTTCGTCCT 59.545 57.895 0.00 0.00 0.00 3.85
5130 5747 0.179001 CCCACCAACCTTTCGTCCTT 60.179 55.000 0.00 0.00 0.00 3.36
5131 5748 1.235724 CCACCAACCTTTCGTCCTTC 58.764 55.000 0.00 0.00 0.00 3.46
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
94 95 6.852420 AGACTAATGTAAGAGGTTGCAGTA 57.148 37.500 0.00 0.00 31.17 2.74
113 114 6.293462 GCGATTTTTCTCACAAACCTTAGACT 60.293 38.462 0.00 0.00 0.00 3.24
119 120 2.604614 GCGCGATTTTTCTCACAAACCT 60.605 45.455 12.10 0.00 0.00 3.50
126 127 1.922135 GCTGGGCGCGATTTTTCTCA 61.922 55.000 12.10 0.00 0.00 3.27
127 128 1.226407 GCTGGGCGCGATTTTTCTC 60.226 57.895 12.10 0.00 0.00 2.87
206 207 3.691342 CCTCCCGCAACCGTCTGA 61.691 66.667 0.00 0.00 0.00 3.27
207 208 3.530910 AACCTCCCGCAACCGTCTG 62.531 63.158 0.00 0.00 0.00 3.51
212 213 2.036571 CCGTAAACCTCCCGCAACC 61.037 63.158 0.00 0.00 0.00 3.77
235 236 1.483004 GAGTAAGGGCCTCTCCAAGAC 59.517 57.143 6.46 0.00 36.21 3.01
276 277 4.993705 TTTTAGTCCTCCAGTGGAACAT 57.006 40.909 14.17 2.30 44.52 2.71
302 303 8.438676 AAATCGACCTAGAATGTATTTCCTTG 57.561 34.615 0.00 0.00 34.67 3.61
340 341 2.917933 CCGAGAAGTCCAATGCCATTA 58.082 47.619 0.00 0.00 0.00 1.90
370 371 2.214376 AATCCGATGAAGGTGCCAAA 57.786 45.000 0.00 0.00 0.00 3.28
502 503 8.551205 CATCAAACGTGTGCACTATATAATTCT 58.449 33.333 19.41 0.00 0.00 2.40
509 510 6.334202 TGATACATCAAACGTGTGCACTATA 58.666 36.000 19.41 0.00 33.08 1.31
512 513 3.398406 TGATACATCAAACGTGTGCACT 58.602 40.909 19.41 0.00 33.08 4.40
532 533 3.378339 GGTCGTAATCGTGTTAGGGATG 58.622 50.000 0.00 0.00 38.33 3.51
549 550 3.167945 GTTACGGCGTGACGGTCG 61.168 66.667 24.86 3.32 41.63 4.79
553 554 1.081641 ACTGAGTTACGGCGTGACG 60.082 57.895 25.86 16.06 40.31 4.35
554 555 0.039798 TCACTGAGTTACGGCGTGAC 60.040 55.000 25.16 25.16 30.41 3.67
555 556 0.240145 CTCACTGAGTTACGGCGTGA 59.760 55.000 24.86 12.70 33.94 4.35
556 557 1.344942 GCTCACTGAGTTACGGCGTG 61.345 60.000 24.86 7.06 31.39 5.34
557 558 1.080705 GCTCACTGAGTTACGGCGT 60.081 57.895 19.64 19.64 31.39 5.68
558 559 0.450583 TAGCTCACTGAGTTACGGCG 59.549 55.000 4.80 4.80 31.39 6.46
559 560 2.873133 ATAGCTCACTGAGTTACGGC 57.127 50.000 7.89 0.00 28.89 5.68
600 601 7.287810 ACATTGGTAGTAAGTTGAAAGAACCT 58.712 34.615 0.00 0.00 0.00 3.50
601 602 7.506328 ACATTGGTAGTAAGTTGAAAGAACC 57.494 36.000 0.00 0.00 0.00 3.62
659 661 9.430623 GCATAATGGTGGTAAGTTTTTGTTATT 57.569 29.630 0.00 0.00 0.00 1.40
664 666 7.721286 TTTGCATAATGGTGGTAAGTTTTTG 57.279 32.000 0.00 0.00 0.00 2.44
1239 1638 4.083855 CCCCAATCACGACAATATTCGATG 60.084 45.833 3.88 0.00 41.78 3.84
1316 1715 3.066342 TCTTACCGTTCTTCGCCTCATAG 59.934 47.826 0.00 0.00 38.35 2.23
1317 1716 3.018856 TCTTACCGTTCTTCGCCTCATA 58.981 45.455 0.00 0.00 38.35 2.15
1322 1721 0.529378 TCCTCTTACCGTTCTTCGCC 59.471 55.000 0.00 0.00 38.35 5.54
1550 1949 3.487202 GCGGCGTTCATGAAGCGA 61.487 61.111 24.74 0.00 0.00 4.93
1621 2026 5.055812 GCCAAATTCACAAATTGGAACAGA 58.944 37.500 7.90 0.00 42.39 3.41
1668 2073 7.394923 CCCACCTCATACAATACCTTACAAAAA 59.605 37.037 0.00 0.00 0.00 1.94
1738 2143 1.644509 TGTAGAGGCTCTTCCAAGCA 58.355 50.000 24.13 9.49 44.35 3.91
1785 2190 8.689251 TCAACGAGATCAAACTAGAAGTATTG 57.311 34.615 0.00 0.00 0.00 1.90
1888 2297 5.460419 GCGTCACATCACTTAATAAGAGAGG 59.540 44.000 7.06 8.65 36.26 3.69
1894 2303 4.827692 ACCAGCGTCACATCACTTAATAA 58.172 39.130 0.00 0.00 0.00 1.40
1910 2319 6.102006 TCTTTATTTACGATTCAACCAGCG 57.898 37.500 0.00 0.00 0.00 5.18
1956 2371 6.126507 TGGATATGGCTTATGAACTTGGAAGA 60.127 38.462 0.00 0.00 0.00 2.87
2351 2767 4.351874 AGTGAAATCGTTCCTCTCCAAA 57.648 40.909 0.00 0.00 32.28 3.28
2453 2869 0.411452 TTTGCTTATGGGCCTGGGAA 59.589 50.000 4.53 0.00 0.00 3.97
2598 3014 2.325583 ACTTTCACGGCTTCTTGTGA 57.674 45.000 0.00 0.00 42.98 3.58
3024 3447 6.018016 TCAGGCATGAACAATTATATGTGACG 60.018 38.462 0.00 0.00 32.81 4.35
3560 3983 7.071069 TCATAATCTGACATAGCAACTCCAT 57.929 36.000 0.00 0.00 0.00 3.41
3665 4088 6.856426 GCAGAACGGGCATTTATATTTCTAAC 59.144 38.462 0.00 0.00 0.00 2.34
3813 4239 2.033801 CCATAATGCTCTTCTTTGGCCG 59.966 50.000 0.00 0.00 0.00 6.13
3829 4255 6.899393 ATTGCAACTCTTTCACTTCCATAA 57.101 33.333 0.00 0.00 0.00 1.90
4018 4457 5.675684 TGGATCAGTAACTCAATGCACTA 57.324 39.130 0.00 0.00 0.00 2.74
4024 4463 6.435277 AGCAAAACATGGATCAGTAACTCAAT 59.565 34.615 0.00 0.00 0.00 2.57
4312 4751 2.437085 TTAGCTCCCTCGACTGATCA 57.563 50.000 0.00 0.00 0.00 2.92
4581 5196 2.719531 TCAACAAACCTACCAGCACA 57.280 45.000 0.00 0.00 0.00 4.57
4620 5235 4.019321 ACACTTTGGATGGAGCTTAGCTAA 60.019 41.667 6.75 5.94 39.88 3.09
4697 5314 3.057245 CCTAAGCCTGCTGGTTTTCTTTC 60.057 47.826 16.54 0.00 37.87 2.62
4761 5378 1.286257 AGGATGAGGGGAAGCTTTTCC 59.714 52.381 0.00 5.80 40.38 3.13
4762 5379 2.240921 AGAGGATGAGGGGAAGCTTTTC 59.759 50.000 0.00 0.00 0.00 2.29
4763 5380 2.282900 AGAGGATGAGGGGAAGCTTTT 58.717 47.619 0.00 0.00 0.00 2.27
4764 5381 1.978361 AGAGGATGAGGGGAAGCTTT 58.022 50.000 0.00 0.00 0.00 3.51
4765 5382 2.877154 TAGAGGATGAGGGGAAGCTT 57.123 50.000 0.00 0.00 0.00 3.74
4766 5383 2.618794 CATAGAGGATGAGGGGAAGCT 58.381 52.381 0.00 0.00 37.82 3.74
4767 5384 1.003003 GCATAGAGGATGAGGGGAAGC 59.997 57.143 0.00 0.00 37.82 3.86
4768 5385 1.627834 GGCATAGAGGATGAGGGGAAG 59.372 57.143 0.00 0.00 37.82 3.46
4769 5386 1.061424 TGGCATAGAGGATGAGGGGAA 60.061 52.381 0.00 0.00 37.82 3.97
4770 5387 0.567687 TGGCATAGAGGATGAGGGGA 59.432 55.000 0.00 0.00 37.82 4.81
4771 5388 0.689623 GTGGCATAGAGGATGAGGGG 59.310 60.000 0.00 0.00 37.82 4.79
4772 5389 1.071385 GTGTGGCATAGAGGATGAGGG 59.929 57.143 0.00 0.00 37.82 4.30
4773 5390 1.269988 CGTGTGGCATAGAGGATGAGG 60.270 57.143 0.00 0.00 37.82 3.86
4774 5391 1.683385 TCGTGTGGCATAGAGGATGAG 59.317 52.381 0.00 0.00 37.82 2.90
4775 5392 1.683385 CTCGTGTGGCATAGAGGATGA 59.317 52.381 0.00 0.00 37.82 2.92
4776 5393 1.410517 ACTCGTGTGGCATAGAGGATG 59.589 52.381 16.98 0.00 38.73 3.51
4777 5394 1.781786 ACTCGTGTGGCATAGAGGAT 58.218 50.000 16.98 0.09 35.22 3.24
4778 5395 2.092592 TCTACTCGTGTGGCATAGAGGA 60.093 50.000 16.98 10.35 35.22 3.71
4779 5396 2.298610 TCTACTCGTGTGGCATAGAGG 58.701 52.381 16.98 4.97 35.22 3.69
4780 5397 3.304996 CCATCTACTCGTGTGGCATAGAG 60.305 52.174 12.95 12.95 36.83 2.43
4781 5398 2.623416 CCATCTACTCGTGTGGCATAGA 59.377 50.000 0.00 0.00 0.00 1.98
4782 5399 2.362397 ACCATCTACTCGTGTGGCATAG 59.638 50.000 0.00 0.00 35.11 2.23
4783 5400 2.384828 ACCATCTACTCGTGTGGCATA 58.615 47.619 0.00 0.00 35.11 3.14
4784 5401 1.195115 ACCATCTACTCGTGTGGCAT 58.805 50.000 0.00 0.00 35.11 4.40
4785 5402 1.749063 CTACCATCTACTCGTGTGGCA 59.251 52.381 0.00 0.00 35.11 4.92
4786 5403 1.067212 CCTACCATCTACTCGTGTGGC 59.933 57.143 0.00 0.00 35.11 5.01
4787 5404 1.067212 GCCTACCATCTACTCGTGTGG 59.933 57.143 0.00 0.00 37.74 4.17
4788 5405 1.067212 GGCCTACCATCTACTCGTGTG 59.933 57.143 0.00 0.00 35.26 3.82
4789 5406 1.400737 GGCCTACCATCTACTCGTGT 58.599 55.000 0.00 0.00 35.26 4.49
4790 5407 0.311165 CGGCCTACCATCTACTCGTG 59.689 60.000 0.00 0.00 34.57 4.35
4791 5408 0.182061 TCGGCCTACCATCTACTCGT 59.818 55.000 0.00 0.00 34.57 4.18
4792 5409 1.315690 TTCGGCCTACCATCTACTCG 58.684 55.000 0.00 0.00 34.57 4.18
4793 5410 2.957006 TCTTTCGGCCTACCATCTACTC 59.043 50.000 0.00 0.00 34.57 2.59
4794 5411 3.028094 TCTTTCGGCCTACCATCTACT 57.972 47.619 0.00 0.00 34.57 2.57
4795 5412 3.814005 TTCTTTCGGCCTACCATCTAC 57.186 47.619 0.00 0.00 34.57 2.59
4796 5413 4.510571 GTTTTCTTTCGGCCTACCATCTA 58.489 43.478 0.00 0.00 34.57 1.98
4797 5414 3.344515 GTTTTCTTTCGGCCTACCATCT 58.655 45.455 0.00 0.00 34.57 2.90
4798 5415 2.422479 GGTTTTCTTTCGGCCTACCATC 59.578 50.000 0.00 0.00 34.57 3.51
4799 5416 2.224917 TGGTTTTCTTTCGGCCTACCAT 60.225 45.455 0.00 0.00 34.57 3.55
4800 5417 1.143277 TGGTTTTCTTTCGGCCTACCA 59.857 47.619 0.00 0.00 34.57 3.25
4801 5418 1.810755 CTGGTTTTCTTTCGGCCTACC 59.189 52.381 0.00 0.00 0.00 3.18
4802 5419 1.199327 GCTGGTTTTCTTTCGGCCTAC 59.801 52.381 0.00 0.00 0.00 3.18
4803 5420 1.202830 TGCTGGTTTTCTTTCGGCCTA 60.203 47.619 0.00 0.00 32.23 3.93
4804 5421 0.467290 TGCTGGTTTTCTTTCGGCCT 60.467 50.000 0.00 0.00 32.23 5.19
4805 5422 0.039165 CTGCTGGTTTTCTTTCGGCC 60.039 55.000 0.00 0.00 32.23 6.13
4806 5423 0.039165 CCTGCTGGTTTTCTTTCGGC 60.039 55.000 0.51 0.00 0.00 5.54
4807 5424 0.039165 GCCTGCTGGTTTTCTTTCGG 60.039 55.000 11.69 0.00 35.27 4.30
4808 5425 0.954452 AGCCTGCTGGTTTTCTTTCG 59.046 50.000 11.69 0.00 35.27 3.46
4809 5426 3.057245 CCTAAGCCTGCTGGTTTTCTTTC 60.057 47.826 16.54 0.00 37.87 2.62
4810 5427 2.893489 CCTAAGCCTGCTGGTTTTCTTT 59.107 45.455 16.54 0.00 37.87 2.52
4811 5428 2.158460 ACCTAAGCCTGCTGGTTTTCTT 60.158 45.455 16.54 10.54 37.87 2.52
4812 5429 1.425448 ACCTAAGCCTGCTGGTTTTCT 59.575 47.619 16.54 0.00 37.87 2.52
4813 5430 1.911057 ACCTAAGCCTGCTGGTTTTC 58.089 50.000 16.54 0.00 37.87 2.29
4814 5431 2.381752 AACCTAAGCCTGCTGGTTTT 57.618 45.000 16.54 11.02 39.48 2.43
4815 5432 2.290960 CCTAACCTAAGCCTGCTGGTTT 60.291 50.000 16.26 15.70 42.14 3.27
4816 5433 1.282157 CCTAACCTAAGCCTGCTGGTT 59.718 52.381 15.59 15.59 44.03 3.67
4817 5434 0.912486 CCTAACCTAAGCCTGCTGGT 59.088 55.000 11.69 0.00 35.27 4.00
4818 5435 0.464554 GCCTAACCTAAGCCTGCTGG 60.465 60.000 5.03 5.03 0.00 4.85
4819 5436 0.543749 AGCCTAACCTAAGCCTGCTG 59.456 55.000 0.00 0.00 0.00 4.41
4820 5437 1.290134 AAGCCTAACCTAAGCCTGCT 58.710 50.000 0.00 0.00 0.00 4.24
4821 5438 2.130272 AAAGCCTAACCTAAGCCTGC 57.870 50.000 0.00 0.00 0.00 4.85
4822 5439 3.686016 TCAAAAGCCTAACCTAAGCCTG 58.314 45.455 0.00 0.00 0.00 4.85
4823 5440 4.382386 TTCAAAAGCCTAACCTAAGCCT 57.618 40.909 0.00 0.00 0.00 4.58
4824 5441 4.678044 GCATTCAAAAGCCTAACCTAAGCC 60.678 45.833 0.00 0.00 0.00 4.35
4825 5442 4.082245 TGCATTCAAAAGCCTAACCTAAGC 60.082 41.667 0.00 0.00 0.00 3.09
4826 5443 5.643379 TGCATTCAAAAGCCTAACCTAAG 57.357 39.130 0.00 0.00 0.00 2.18
4827 5444 6.437162 AGAATGCATTCAAAAGCCTAACCTAA 59.563 34.615 34.59 0.00 39.23 2.69
4828 5445 5.951747 AGAATGCATTCAAAAGCCTAACCTA 59.048 36.000 34.59 0.00 39.23 3.08
4829 5446 4.774200 AGAATGCATTCAAAAGCCTAACCT 59.226 37.500 34.59 11.82 39.23 3.50
4830 5447 5.077134 AGAATGCATTCAAAAGCCTAACC 57.923 39.130 34.59 9.59 39.23 2.85
4831 5448 5.958955 AGAGAATGCATTCAAAAGCCTAAC 58.041 37.500 34.59 15.25 39.23 2.34
4832 5449 7.013655 GGATAGAGAATGCATTCAAAAGCCTAA 59.986 37.037 34.59 13.81 39.23 2.69
4833 5450 6.488006 GGATAGAGAATGCATTCAAAAGCCTA 59.512 38.462 34.59 23.89 39.23 3.93
4834 5451 5.301298 GGATAGAGAATGCATTCAAAAGCCT 59.699 40.000 34.59 22.87 39.23 4.58
4835 5452 5.068198 TGGATAGAGAATGCATTCAAAAGCC 59.932 40.000 34.59 28.66 39.23 4.35
4836 5453 6.140303 TGGATAGAGAATGCATTCAAAAGC 57.860 37.500 34.59 22.67 39.23 3.51
4837 5454 9.595823 AAATTGGATAGAGAATGCATTCAAAAG 57.404 29.630 34.59 0.00 39.23 2.27
4838 5455 9.947433 AAAATTGGATAGAGAATGCATTCAAAA 57.053 25.926 34.59 21.66 39.23 2.44
4839 5456 9.947433 AAAAATTGGATAGAGAATGCATTCAAA 57.053 25.926 34.59 21.97 39.23 2.69
4903 5520 1.073025 AAGCGGTTGATGCACAGGA 59.927 52.632 0.00 0.00 33.85 3.86
4905 5522 1.210931 CCAAGCGGTTGATGCACAG 59.789 57.895 27.92 6.04 35.46 3.66
4928 5545 2.460918 CTTATAGGGACACGCGTCAAG 58.539 52.381 9.86 0.00 44.54 3.02
4943 5560 3.181501 GCAACAAGAATGCGTGGCTTATA 60.182 43.478 0.00 0.00 33.57 0.98
4944 5561 2.415893 GCAACAAGAATGCGTGGCTTAT 60.416 45.455 0.00 0.00 33.57 1.73
4946 5563 0.318955 GCAACAAGAATGCGTGGCTT 60.319 50.000 0.00 0.00 33.57 4.35
4956 5573 4.079253 GGGATAAGGTTCAGCAACAAGAA 58.921 43.478 0.00 0.00 33.70 2.52
4970 5587 3.513909 TGAAGGCATGATGGGATAAGG 57.486 47.619 0.00 0.00 0.00 2.69
4979 5596 6.383147 AGATTTCCTGAAAATGAAGGCATGAT 59.617 34.615 0.00 0.00 37.70 2.45
4993 5610 2.440409 GGCTTGCTGAGATTTCCTGAA 58.560 47.619 0.00 0.00 0.00 3.02
4994 5611 1.340405 GGGCTTGCTGAGATTTCCTGA 60.340 52.381 0.00 0.00 0.00 3.86
5013 5630 2.594303 TCAAGCAGCGTTGGTGGG 60.594 61.111 4.27 0.73 34.72 4.61
5025 5642 2.758770 TACAGGGACACGCGTCAAGC 62.759 60.000 9.86 0.00 44.54 4.01
5026 5643 0.319211 TTACAGGGACACGCGTCAAG 60.319 55.000 9.86 0.00 44.54 3.02
5027 5644 0.319211 CTTACAGGGACACGCGTCAA 60.319 55.000 9.86 0.00 44.54 3.18
5028 5645 1.287815 CTTACAGGGACACGCGTCA 59.712 57.895 9.86 0.00 44.54 4.35
5029 5646 2.092882 GCTTACAGGGACACGCGTC 61.093 63.158 9.86 0.00 41.80 5.19
5030 5647 2.048503 GCTTACAGGGACACGCGT 60.049 61.111 5.58 5.58 0.00 6.01
5031 5648 2.813908 GGCTTACAGGGACACGCG 60.814 66.667 3.53 3.53 0.00 6.01
5032 5649 2.033194 GTGGCTTACAGGGACACGC 61.033 63.158 0.00 0.00 32.80 5.34
5033 5650 4.278956 GTGGCTTACAGGGACACG 57.721 61.111 0.00 0.00 32.80 4.49
5034 5651 2.033194 GCGTGGCTTACAGGGACAC 61.033 63.158 0.00 0.00 39.17 3.67
5035 5652 1.836999 ATGCGTGGCTTACAGGGACA 61.837 55.000 0.00 0.00 38.12 4.02
5036 5653 0.676782 AATGCGTGGCTTACAGGGAC 60.677 55.000 0.00 0.00 38.12 4.46
5037 5654 0.392461 GAATGCGTGGCTTACAGGGA 60.392 55.000 0.00 0.00 39.61 4.20
5038 5655 0.392998 AGAATGCGTGGCTTACAGGG 60.393 55.000 0.00 0.00 35.55 4.45
5039 5656 1.131126 CAAGAATGCGTGGCTTACAGG 59.869 52.381 0.00 0.00 37.99 4.00
5040 5657 1.806542 ACAAGAATGCGTGGCTTACAG 59.193 47.619 0.00 0.00 0.00 2.74
5041 5658 1.890876 ACAAGAATGCGTGGCTTACA 58.109 45.000 0.00 0.00 0.00 2.41
5042 5659 2.584791 CAACAAGAATGCGTGGCTTAC 58.415 47.619 0.00 0.00 0.00 2.34
5043 5660 1.068610 GCAACAAGAATGCGTGGCTTA 60.069 47.619 0.00 0.00 33.57 3.09
5044 5661 0.318955 GCAACAAGAATGCGTGGCTT 60.319 50.000 0.00 0.00 33.57 4.35
5045 5662 1.286880 GCAACAAGAATGCGTGGCT 59.713 52.632 0.00 0.00 33.57 4.75
5046 5663 3.846754 GCAACAAGAATGCGTGGC 58.153 55.556 0.00 0.00 33.57 5.01
5051 5668 3.375782 AAGGTTCAGCAACAAGAATGC 57.624 42.857 0.00 0.00 44.15 3.56
5052 5669 5.393461 GGGATAAGGTTCAGCAACAAGAATG 60.393 44.000 0.00 0.00 33.70 2.67
5053 5670 4.706962 GGGATAAGGTTCAGCAACAAGAAT 59.293 41.667 0.00 0.00 33.70 2.40
5054 5671 4.079253 GGGATAAGGTTCAGCAACAAGAA 58.921 43.478 0.00 0.00 33.70 2.52
5055 5672 3.073798 TGGGATAAGGTTCAGCAACAAGA 59.926 43.478 0.00 0.00 33.70 3.02
5056 5673 3.420893 TGGGATAAGGTTCAGCAACAAG 58.579 45.455 0.00 0.00 33.70 3.16
5057 5674 3.517296 TGGGATAAGGTTCAGCAACAA 57.483 42.857 0.00 0.00 33.70 2.83
5058 5675 3.010027 TGATGGGATAAGGTTCAGCAACA 59.990 43.478 0.00 0.00 33.70 3.33
5059 5676 3.620488 TGATGGGATAAGGTTCAGCAAC 58.380 45.455 0.00 0.00 0.00 4.17
5060 5677 4.209538 CATGATGGGATAAGGTTCAGCAA 58.790 43.478 0.00 0.00 0.00 3.91
5061 5678 3.824133 CATGATGGGATAAGGTTCAGCA 58.176 45.455 0.00 0.00 0.00 4.41
5062 5679 2.555757 GCATGATGGGATAAGGTTCAGC 59.444 50.000 0.00 0.00 0.00 4.26
5063 5680 3.152341 GGCATGATGGGATAAGGTTCAG 58.848 50.000 0.00 0.00 0.00 3.02
5064 5681 2.785269 AGGCATGATGGGATAAGGTTCA 59.215 45.455 0.00 0.00 0.00 3.18
5065 5682 3.515602 AGGCATGATGGGATAAGGTTC 57.484 47.619 0.00 0.00 0.00 3.62
5066 5683 3.205056 TGAAGGCATGATGGGATAAGGTT 59.795 43.478 0.00 0.00 0.00 3.50
5067 5684 2.785269 TGAAGGCATGATGGGATAAGGT 59.215 45.455 0.00 0.00 0.00 3.50
5068 5685 3.513909 TGAAGGCATGATGGGATAAGG 57.486 47.619 0.00 0.00 0.00 2.69
5069 5686 5.047519 GGAAATGAAGGCATGATGGGATAAG 60.048 44.000 0.00 0.00 34.26 1.73
5070 5687 4.834496 GGAAATGAAGGCATGATGGGATAA 59.166 41.667 0.00 0.00 34.26 1.75
5071 5688 4.140971 TGGAAATGAAGGCATGATGGGATA 60.141 41.667 0.00 0.00 34.26 2.59
5072 5689 3.236896 GGAAATGAAGGCATGATGGGAT 58.763 45.455 0.00 0.00 34.26 3.85
5073 5690 2.024177 TGGAAATGAAGGCATGATGGGA 60.024 45.455 0.00 0.00 34.26 4.37
5074 5691 2.364324 CTGGAAATGAAGGCATGATGGG 59.636 50.000 0.00 0.00 34.26 4.00
5075 5692 2.364324 CCTGGAAATGAAGGCATGATGG 59.636 50.000 0.00 0.00 34.26 3.51
5076 5693 3.293337 TCCTGGAAATGAAGGCATGATG 58.707 45.455 0.00 0.00 34.26 3.07
5077 5694 3.675348 TCCTGGAAATGAAGGCATGAT 57.325 42.857 0.00 0.00 34.26 2.45
5078 5695 3.454719 TTCCTGGAAATGAAGGCATGA 57.545 42.857 6.68 0.00 34.26 3.07
5079 5696 4.404715 AGATTTCCTGGAAATGAAGGCATG 59.595 41.667 33.19 0.00 41.56 4.06
5080 5697 4.617593 AGATTTCCTGGAAATGAAGGCAT 58.382 39.130 33.19 12.61 41.56 4.40
5081 5698 4.051661 AGATTTCCTGGAAATGAAGGCA 57.948 40.909 33.19 7.47 41.56 4.75
5082 5699 5.451103 GCTAAGATTTCCTGGAAATGAAGGC 60.451 44.000 33.19 25.60 41.56 4.35
5083 5700 5.653769 TGCTAAGATTTCCTGGAAATGAAGG 59.346 40.000 33.19 21.55 41.56 3.46
5084 5701 6.764308 TGCTAAGATTTCCTGGAAATGAAG 57.236 37.500 33.19 25.65 41.56 3.02
5085 5702 6.350445 GCTTGCTAAGATTTCCTGGAAATGAA 60.350 38.462 33.19 18.94 41.56 2.57
5086 5703 5.126061 GCTTGCTAAGATTTCCTGGAAATGA 59.874 40.000 33.19 19.13 41.56 2.57
5087 5704 5.346522 GCTTGCTAAGATTTCCTGGAAATG 58.653 41.667 33.19 21.42 41.56 2.32
5088 5705 4.403752 GGCTTGCTAAGATTTCCTGGAAAT 59.596 41.667 29.68 29.68 43.77 2.17
5089 5706 3.763897 GGCTTGCTAAGATTTCCTGGAAA 59.236 43.478 23.08 23.08 35.94 3.13
5090 5707 3.356290 GGCTTGCTAAGATTTCCTGGAA 58.644 45.455 4.68 4.68 0.00 3.53
5091 5708 2.357154 GGGCTTGCTAAGATTTCCTGGA 60.357 50.000 0.00 0.00 0.00 3.86
5092 5709 2.027385 GGGCTTGCTAAGATTTCCTGG 58.973 52.381 0.00 0.00 0.00 4.45
5093 5710 2.027385 GGGGCTTGCTAAGATTTCCTG 58.973 52.381 0.00 0.00 0.00 3.86
5094 5711 1.640670 TGGGGCTTGCTAAGATTTCCT 59.359 47.619 0.00 0.00 0.00 3.36
5095 5712 1.751351 GTGGGGCTTGCTAAGATTTCC 59.249 52.381 0.00 0.00 0.00 3.13
5096 5713 1.751351 GGTGGGGCTTGCTAAGATTTC 59.249 52.381 0.00 0.00 0.00 2.17
5097 5714 1.077005 TGGTGGGGCTTGCTAAGATTT 59.923 47.619 0.00 0.00 0.00 2.17
5098 5715 0.704076 TGGTGGGGCTTGCTAAGATT 59.296 50.000 0.00 0.00 0.00 2.40
5099 5716 0.704076 TTGGTGGGGCTTGCTAAGAT 59.296 50.000 0.00 0.00 0.00 2.40
5100 5717 0.251165 GTTGGTGGGGCTTGCTAAGA 60.251 55.000 0.00 0.00 0.00 2.10
5101 5718 1.250840 GGTTGGTGGGGCTTGCTAAG 61.251 60.000 0.00 0.00 0.00 2.18
5102 5719 1.228737 GGTTGGTGGGGCTTGCTAA 60.229 57.895 0.00 0.00 0.00 3.09
5103 5720 1.725169 AAGGTTGGTGGGGCTTGCTA 61.725 55.000 0.00 0.00 0.00 3.49
5104 5721 2.603933 AAAGGTTGGTGGGGCTTGCT 62.604 55.000 0.00 0.00 0.00 3.91
5105 5722 2.099652 GAAAGGTTGGTGGGGCTTGC 62.100 60.000 0.00 0.00 0.00 4.01
5106 5723 1.805428 CGAAAGGTTGGTGGGGCTTG 61.805 60.000 0.00 0.00 0.00 4.01
5107 5724 1.530655 CGAAAGGTTGGTGGGGCTT 60.531 57.895 0.00 0.00 0.00 4.35
5108 5725 2.115266 CGAAAGGTTGGTGGGGCT 59.885 61.111 0.00 0.00 0.00 5.19
5109 5726 2.203437 ACGAAAGGTTGGTGGGGC 60.203 61.111 0.00 0.00 0.00 5.80
5110 5727 1.602605 GGACGAAAGGTTGGTGGGG 60.603 63.158 0.00 0.00 0.00 4.96
5111 5728 0.179001 AAGGACGAAAGGTTGGTGGG 60.179 55.000 0.00 0.00 0.00 4.61
5112 5729 1.235724 GAAGGACGAAAGGTTGGTGG 58.764 55.000 0.00 0.00 0.00 4.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.