Multiple sequence alignment - TraesCS7B01G305200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G305200 chr7B 100.000 3148 0 0 1 3148 546893798 546896945 0.000000e+00 5814
1 TraesCS7B01G305200 chr7B 95.333 450 16 3 2700 3148 277586917 277586472 0.000000e+00 710
2 TraesCS7B01G305200 chr7B 95.333 300 14 0 1 300 593080666 593080965 7.900000e-131 477
3 TraesCS7B01G305200 chr7B 93.694 222 13 1 2485 2706 181326242 181326022 6.510000e-87 331
4 TraesCS7B01G305200 chr7B 96.377 138 3 2 2370 2506 5556546 5556682 3.160000e-55 226
5 TraesCS7B01G305200 chr7B 92.617 149 9 1 2360 2506 602498572 602498720 2.460000e-51 213
6 TraesCS7B01G305200 chr7D 93.079 1936 89 17 303 2225 515809771 515811674 0.000000e+00 2791
7 TraesCS7B01G305200 chr7A 90.228 1975 94 39 303 2225 589427102 589429029 0.000000e+00 2486
8 TraesCS7B01G305200 chr3A 88.288 777 70 14 2379 3140 176906915 176906145 0.000000e+00 911
9 TraesCS7B01G305200 chr6B 95.556 450 16 2 2700 3148 612268378 612267932 0.000000e+00 717
10 TraesCS7B01G305200 chr6B 95.333 450 17 2 2700 3148 570432553 570432999 0.000000e+00 712
11 TraesCS7B01G305200 chr6B 95.833 144 5 1 2364 2506 284329094 284329237 6.790000e-57 231
12 TraesCS7B01G305200 chr6B 92.258 155 10 2 2353 2506 263070359 263070206 5.290000e-53 219
13 TraesCS7B01G305200 chr6B 90.184 163 12 4 2346 2506 579629691 579629851 3.180000e-50 209
14 TraesCS7B01G305200 chr6B 95.420 131 6 0 2376 2506 629047296 629047166 3.180000e-50 209
15 TraesCS7B01G305200 chr5B 95.333 450 17 2 2700 3148 665260613 665261059 0.000000e+00 712
16 TraesCS7B01G305200 chr5B 95.111 450 18 2 2700 3148 665274410 665274856 0.000000e+00 706
17 TraesCS7B01G305200 chr5B 95.333 300 14 0 1 300 98318718 98318419 7.900000e-131 477
18 TraesCS7B01G305200 chr5B 94.667 300 15 1 1 300 400601645 400601347 6.150000e-127 464
19 TraesCS7B01G305200 chr5B 93.151 146 8 2 2362 2506 83079314 83079458 2.460000e-51 213
20 TraesCS7B01G305200 chr5B 92.000 150 10 2 2357 2506 195478694 195478841 3.180000e-50 209
21 TraesCS7B01G305200 chr2B 95.333 450 17 2 2700 3148 588871680 588871234 0.000000e+00 712
22 TraesCS7B01G305200 chr2B 95.122 451 17 3 2700 3148 694076010 694076457 0.000000e+00 706
23 TraesCS7B01G305200 chr2B 95.261 211 10 0 2498 2708 368289443 368289653 5.030000e-88 335
24 TraesCS7B01G305200 chr2B 97.037 135 4 0 2372 2506 712078979 712079113 8.780000e-56 228
25 TraesCS7B01G305200 chr2B 93.197 147 6 4 2362 2506 508144648 508144792 2.460000e-51 213
26 TraesCS7B01G305200 chr4B 95.111 450 18 2 2700 3148 28370307 28369861 0.000000e+00 706
27 TraesCS7B01G305200 chr4B 94.748 457 18 4 2695 3148 623673720 623674173 0.000000e+00 706
28 TraesCS7B01G305200 chr4B 95.000 300 13 2 1 300 656647646 656647943 1.320000e-128 470
29 TraesCS7B01G305200 chr4B 94.333 300 17 0 1 300 414239693 414239992 7.960000e-126 460
30 TraesCS7B01G305200 chr4B 94.762 210 9 2 2500 2708 84771577 84771785 3.030000e-85 326
31 TraesCS7B01G305200 chr4B 94.712 208 11 0 2499 2706 5446053 5445846 1.090000e-84 324
32 TraesCS7B01G305200 chr4B 94.712 208 11 0 2499 2706 84523517 84523724 1.090000e-84 324
33 TraesCS7B01G305200 chr4B 93.103 145 10 0 2362 2506 268281704 268281848 2.460000e-51 213
34 TraesCS7B01G305200 chr3B 95.710 303 13 0 1 303 773039400 773039098 3.650000e-134 488
35 TraesCS7B01G305200 chr3B 95.105 143 6 1 2365 2506 579663236 579663094 1.140000e-54 224
36 TraesCS7B01G305200 chr3B 93.333 150 8 2 2359 2506 519622469 519622618 1.470000e-53 220
37 TraesCS7B01G305200 chr1B 96.000 300 12 0 1 300 612194081 612193782 3.650000e-134 488
38 TraesCS7B01G305200 chr1B 94.333 300 17 0 1 300 115292363 115292662 7.960000e-126 460
39 TraesCS7B01G305200 chr1B 94.333 300 17 0 1 300 507385672 507385373 7.960000e-126 460
40 TraesCS7B01G305200 chr1B 95.804 143 5 1 2365 2506 515637008 515636866 2.440000e-56 230
41 TraesCS7B01G305200 chr4A 94.737 209 11 0 2499 2707 67928589 67928797 3.030000e-85 326
42 TraesCS7B01G305200 chr3D 96.000 200 8 0 2502 2701 392897407 392897606 3.030000e-85 326
43 TraesCS7B01G305200 chr6A 88.462 260 25 4 2457 2715 5477000 5477255 3.050000e-80 309


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G305200 chr7B 546893798 546896945 3147 False 5814 5814 100.000 1 3148 1 chr7B.!!$F2 3147
1 TraesCS7B01G305200 chr7D 515809771 515811674 1903 False 2791 2791 93.079 303 2225 1 chr7D.!!$F1 1922
2 TraesCS7B01G305200 chr7A 589427102 589429029 1927 False 2486 2486 90.228 303 2225 1 chr7A.!!$F1 1922
3 TraesCS7B01G305200 chr3A 176906145 176906915 770 True 911 911 88.288 2379 3140 1 chr3A.!!$R1 761

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
116 117 0.028505 GTGTTGCAGTGCTGTCTGTG 59.971 55.0 17.6 0.0 37.7 3.66 F
399 409 0.101579 AAAAACGTGAAACCCCAGCG 59.898 50.0 0.0 0.0 0.0 5.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1101 1130 0.175760 GGAGGAGTAGCATTGCACGA 59.824 55.0 11.91 0.0 0.00 4.35 R
2272 2350 0.036105 GGGTTGGATTTACCGTCCGT 60.036 55.0 0.00 0.0 42.61 4.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.700350 AGGGGAGAGAGGGTGGGG 61.700 72.222 0.00 0.00 0.00 4.96
20 21 4.741239 GGAGAGAGGGTGGGGCCA 62.741 72.222 4.39 0.00 39.65 5.36
21 22 3.086600 GAGAGAGGGTGGGGCCAG 61.087 72.222 4.39 0.00 39.65 4.85
33 34 2.991540 GGCCAGCCCAAGTGGAAC 60.992 66.667 0.00 0.00 37.23 3.62
34 35 2.203480 GCCAGCCCAAGTGGAACA 60.203 61.111 0.00 0.00 41.43 3.18
50 51 3.337619 CACAGACTGTGCAGTGCC 58.662 61.111 22.06 4.57 41.89 5.01
51 52 2.111878 ACAGACTGTGCAGTGCCC 59.888 61.111 13.72 0.28 42.66 5.36
52 53 2.111669 CAGACTGTGCAGTGCCCA 59.888 61.111 13.72 6.34 42.66 5.36
53 54 1.526686 CAGACTGTGCAGTGCCCAA 60.527 57.895 13.72 0.00 42.66 4.12
54 55 1.228063 AGACTGTGCAGTGCCCAAG 60.228 57.895 13.72 9.81 42.66 3.61
55 56 1.227943 GACTGTGCAGTGCCCAAGA 60.228 57.895 13.72 0.00 42.66 3.02
56 57 1.228063 ACTGTGCAGTGCCCAAGAG 60.228 57.895 13.72 4.53 40.75 2.85
57 58 2.595463 TGTGCAGTGCCCAAGAGC 60.595 61.111 13.72 0.00 0.00 4.09
58 59 2.282040 GTGCAGTGCCCAAGAGCT 60.282 61.111 13.72 0.00 0.00 4.09
59 60 1.003355 GTGCAGTGCCCAAGAGCTA 60.003 57.895 13.72 0.00 0.00 3.32
60 61 1.023513 GTGCAGTGCCCAAGAGCTAG 61.024 60.000 13.72 0.00 0.00 3.42
61 62 1.451028 GCAGTGCCCAAGAGCTAGG 60.451 63.158 2.85 0.00 0.00 3.02
73 74 4.124910 GCTAGGCGCTGCACATTA 57.875 55.556 7.64 0.00 35.14 1.90
74 75 1.643832 GCTAGGCGCTGCACATTAC 59.356 57.895 7.64 0.00 35.14 1.89
75 76 1.089481 GCTAGGCGCTGCACATTACA 61.089 55.000 7.64 0.00 35.14 2.41
76 77 0.933097 CTAGGCGCTGCACATTACAG 59.067 55.000 7.64 0.00 38.22 2.74
77 78 0.461870 TAGGCGCTGCACATTACAGG 60.462 55.000 7.64 0.00 35.62 4.00
78 79 2.040544 GGCGCTGCACATTACAGGT 61.041 57.895 7.64 0.00 35.62 4.00
79 80 1.135315 GCGCTGCACATTACAGGTG 59.865 57.895 0.00 0.00 39.25 4.00
80 81 1.577328 GCGCTGCACATTACAGGTGT 61.577 55.000 0.00 0.00 38.51 4.16
82 83 0.523072 GCTGCACATTACAGGTGTGG 59.477 55.000 8.17 0.00 45.39 4.17
83 84 0.523072 CTGCACATTACAGGTGTGGC 59.477 55.000 8.17 2.17 45.39 5.01
84 85 1.233950 TGCACATTACAGGTGTGGCG 61.234 55.000 8.17 0.00 45.39 5.69
85 86 1.501741 CACATTACAGGTGTGGCGC 59.498 57.895 0.00 0.00 42.43 6.53
86 87 1.674322 ACATTACAGGTGTGGCGCC 60.674 57.895 22.73 22.73 0.00 6.53
87 88 1.377202 CATTACAGGTGTGGCGCCT 60.377 57.895 29.70 7.80 46.26 5.52
88 89 0.107897 CATTACAGGTGTGGCGCCTA 60.108 55.000 29.70 14.39 43.13 3.93
89 90 0.616371 ATTACAGGTGTGGCGCCTAA 59.384 50.000 29.70 16.05 43.13 2.69
90 91 0.036765 TTACAGGTGTGGCGCCTAAG 60.037 55.000 29.70 13.64 43.13 2.18
91 92 1.189524 TACAGGTGTGGCGCCTAAGT 61.190 55.000 29.70 18.52 43.13 2.24
92 93 1.741770 CAGGTGTGGCGCCTAAGTC 60.742 63.158 29.70 13.23 43.13 3.01
93 94 1.913762 AGGTGTGGCGCCTAAGTCT 60.914 57.895 29.70 15.34 43.18 3.24
94 95 1.003718 GGTGTGGCGCCTAAGTCTT 60.004 57.895 29.70 0.00 0.00 3.01
95 96 0.248289 GGTGTGGCGCCTAAGTCTTA 59.752 55.000 29.70 0.07 0.00 2.10
96 97 1.641577 GTGTGGCGCCTAAGTCTTAG 58.358 55.000 29.70 12.07 0.00 2.18
106 107 4.273148 CCTAAGTCTTAGGTGTTGCAGT 57.727 45.455 25.22 0.00 46.26 4.40
107 108 3.997021 CCTAAGTCTTAGGTGTTGCAGTG 59.003 47.826 25.22 1.65 46.26 3.66
108 109 1.884235 AGTCTTAGGTGTTGCAGTGC 58.116 50.000 8.58 8.58 0.00 4.40
109 110 1.417890 AGTCTTAGGTGTTGCAGTGCT 59.582 47.619 17.60 0.00 0.00 4.40
110 111 1.532868 GTCTTAGGTGTTGCAGTGCTG 59.467 52.381 17.60 0.00 0.00 4.41
111 112 1.140852 TCTTAGGTGTTGCAGTGCTGT 59.859 47.619 17.60 0.00 0.00 4.40
112 113 1.532868 CTTAGGTGTTGCAGTGCTGTC 59.467 52.381 17.60 7.20 0.00 3.51
113 114 0.758734 TAGGTGTTGCAGTGCTGTCT 59.241 50.000 17.60 9.08 0.00 3.41
114 115 0.816825 AGGTGTTGCAGTGCTGTCTG 60.817 55.000 17.60 0.00 38.35 3.51
115 116 1.097547 GGTGTTGCAGTGCTGTCTGT 61.098 55.000 17.60 0.00 37.70 3.41
116 117 0.028505 GTGTTGCAGTGCTGTCTGTG 59.971 55.000 17.60 0.00 37.70 3.66
117 118 1.096967 TGTTGCAGTGCTGTCTGTGG 61.097 55.000 17.60 0.00 37.70 4.17
118 119 1.526686 TTGCAGTGCTGTCTGTGGG 60.527 57.895 17.60 0.00 37.70 4.61
119 120 2.670934 GCAGTGCTGTCTGTGGGG 60.671 66.667 8.18 0.00 37.70 4.96
120 121 2.670934 CAGTGCTGTCTGTGGGGC 60.671 66.667 0.00 0.00 0.00 5.80
121 122 3.958860 AGTGCTGTCTGTGGGGCC 61.959 66.667 0.00 0.00 0.00 5.80
125 126 4.641645 CTGTCTGTGGGGCCGCAA 62.642 66.667 25.93 13.64 35.92 4.85
126 127 4.947147 TGTCTGTGGGGCCGCAAC 62.947 66.667 25.93 19.38 35.92 4.17
127 128 4.643387 GTCTGTGGGGCCGCAACT 62.643 66.667 25.93 0.00 35.92 3.16
128 129 2.925706 TCTGTGGGGCCGCAACTA 60.926 61.111 25.93 12.88 35.92 2.24
129 130 2.436646 CTGTGGGGCCGCAACTAG 60.437 66.667 25.93 18.31 35.92 2.57
130 131 2.925706 TGTGGGGCCGCAACTAGA 60.926 61.111 25.93 3.33 33.12 2.43
131 132 2.436115 GTGGGGCCGCAACTAGAC 60.436 66.667 25.93 7.11 0.00 2.59
132 133 3.712907 TGGGGCCGCAACTAGACC 61.713 66.667 21.93 0.15 0.00 3.85
133 134 3.712907 GGGGCCGCAACTAGACCA 61.713 66.667 16.21 0.00 0.00 4.02
134 135 2.125106 GGGCCGCAACTAGACCAG 60.125 66.667 0.00 0.00 0.00 4.00
135 136 2.125106 GGCCGCAACTAGACCAGG 60.125 66.667 0.00 0.00 0.00 4.45
136 137 2.125106 GCCGCAACTAGACCAGGG 60.125 66.667 0.00 0.00 0.00 4.45
137 138 2.125106 CCGCAACTAGACCAGGGC 60.125 66.667 0.00 0.00 0.00 5.19
138 139 2.660064 CCGCAACTAGACCAGGGCT 61.660 63.158 0.00 0.00 0.00 5.19
139 140 1.448540 CGCAACTAGACCAGGGCTG 60.449 63.158 4.42 0.00 0.00 4.85
140 141 1.746991 GCAACTAGACCAGGGCTGC 60.747 63.158 4.42 0.00 0.00 5.25
141 142 1.078143 CAACTAGACCAGGGCTGCC 60.078 63.158 11.05 11.05 0.00 4.85
142 143 1.538876 AACTAGACCAGGGCTGCCA 60.539 57.895 22.05 0.00 0.00 4.92
143 144 1.842381 AACTAGACCAGGGCTGCCAC 61.842 60.000 22.05 10.03 0.00 5.01
144 145 3.376935 CTAGACCAGGGCTGCCACG 62.377 68.421 22.05 10.35 0.00 4.94
157 158 3.129502 CCACGCTGGCAGGATGTG 61.130 66.667 17.64 9.10 39.31 3.21
166 167 2.494445 CAGGATGTGCGACGCCTA 59.506 61.111 18.69 6.47 0.00 3.93
167 168 1.153647 CAGGATGTGCGACGCCTAA 60.154 57.895 18.69 2.73 0.00 2.69
168 169 1.141881 AGGATGTGCGACGCCTAAG 59.858 57.895 18.69 0.00 0.00 2.18
169 170 1.883084 GGATGTGCGACGCCTAAGG 60.883 63.158 18.69 0.00 0.00 2.69
170 171 1.883084 GATGTGCGACGCCTAAGGG 60.883 63.158 18.69 0.00 0.00 3.95
171 172 2.292794 GATGTGCGACGCCTAAGGGA 62.293 60.000 18.69 0.00 33.58 4.20
172 173 1.895020 ATGTGCGACGCCTAAGGGAA 61.895 55.000 18.69 0.00 33.58 3.97
173 174 1.810030 GTGCGACGCCTAAGGGAAG 60.810 63.158 18.69 0.00 33.58 3.46
174 175 2.202892 GCGACGCCTAAGGGAAGG 60.203 66.667 9.14 0.00 39.87 3.46
175 176 2.499685 CGACGCCTAAGGGAAGGG 59.500 66.667 0.00 0.00 37.11 3.95
176 177 2.189784 GACGCCTAAGGGAAGGGC 59.810 66.667 0.00 0.00 42.18 5.19
179 180 3.798511 GCCTAAGGGAAGGGCGCT 61.799 66.667 7.64 0.00 42.29 5.92
180 181 2.190578 CCTAAGGGAAGGGCGCTG 59.809 66.667 7.64 0.00 40.06 5.18
181 182 2.514824 CTAAGGGAAGGGCGCTGC 60.515 66.667 7.64 0.67 40.06 5.25
182 183 3.326578 TAAGGGAAGGGCGCTGCA 61.327 61.111 11.48 0.00 40.06 4.41
183 184 3.622060 TAAGGGAAGGGCGCTGCAC 62.622 63.158 11.48 7.07 40.06 4.57
187 188 2.047274 GAAGGGCGCTGCACAGTA 60.047 61.111 7.64 0.00 32.33 2.74
188 189 2.046892 AAGGGCGCTGCACAGTAG 60.047 61.111 7.64 0.00 32.33 2.57
189 190 3.612247 AAGGGCGCTGCACAGTAGG 62.612 63.158 7.64 0.00 32.33 3.18
191 192 4.394712 GGCGCTGCACAGTAGGGT 62.395 66.667 7.64 0.00 0.00 4.34
192 193 3.121030 GCGCTGCACAGTAGGGTG 61.121 66.667 0.00 0.00 41.72 4.61
198 199 4.373116 CACAGTAGGGTGCGGCGT 62.373 66.667 9.37 0.00 31.10 5.68
199 200 3.622826 ACAGTAGGGTGCGGCGTT 61.623 61.111 9.37 0.00 0.00 4.84
200 201 2.813908 CAGTAGGGTGCGGCGTTC 60.814 66.667 9.37 1.43 0.00 3.95
201 202 3.307906 AGTAGGGTGCGGCGTTCA 61.308 61.111 9.37 0.00 0.00 3.18
202 203 2.813908 GTAGGGTGCGGCGTTCAG 60.814 66.667 9.37 0.00 0.00 3.02
210 211 3.114616 CGGCGTTCAGCTGTCAGG 61.115 66.667 14.67 8.64 46.91 3.86
212 213 3.782244 GCGTTCAGCTGTCAGGCG 61.782 66.667 14.67 12.61 44.04 5.52
213 214 3.782244 CGTTCAGCTGTCAGGCGC 61.782 66.667 14.67 0.00 37.29 6.53
214 215 3.426568 GTTCAGCTGTCAGGCGCC 61.427 66.667 21.89 21.89 37.29 6.53
215 216 3.939939 TTCAGCTGTCAGGCGCCA 61.940 61.111 31.54 5.56 37.29 5.69
216 217 4.687215 TCAGCTGTCAGGCGCCAC 62.687 66.667 31.54 20.07 37.29 5.01
217 218 4.994471 CAGCTGTCAGGCGCCACA 62.994 66.667 31.54 23.80 37.29 4.17
218 219 4.996434 AGCTGTCAGGCGCCACAC 62.996 66.667 31.54 24.09 37.29 3.82
220 221 4.624364 CTGTCAGGCGCCACACCA 62.624 66.667 31.54 17.82 0.00 4.17
221 222 4.182433 TGTCAGGCGCCACACCAA 62.182 61.111 31.54 6.46 0.00 3.67
222 223 2.904866 GTCAGGCGCCACACCAAA 60.905 61.111 31.54 1.92 0.00 3.28
223 224 2.594303 TCAGGCGCCACACCAAAG 60.594 61.111 31.54 7.49 0.00 2.77
224 225 3.673484 CAGGCGCCACACCAAAGG 61.673 66.667 31.54 1.87 0.00 3.11
225 226 4.974721 AGGCGCCACACCAAAGGG 62.975 66.667 31.54 0.00 41.29 3.95
236 237 2.938354 CCAAAGGGTCAGCAGAGTG 58.062 57.895 0.00 0.00 0.00 3.51
237 238 0.397941 CCAAAGGGTCAGCAGAGTGA 59.602 55.000 0.00 0.00 0.00 3.41
238 239 1.202806 CCAAAGGGTCAGCAGAGTGAA 60.203 52.381 0.00 0.00 0.00 3.18
239 240 2.575532 CAAAGGGTCAGCAGAGTGAAA 58.424 47.619 0.00 0.00 0.00 2.69
240 241 3.152341 CAAAGGGTCAGCAGAGTGAAAT 58.848 45.455 0.00 0.00 0.00 2.17
241 242 3.515602 AAGGGTCAGCAGAGTGAAATT 57.484 42.857 0.00 0.00 0.00 1.82
242 243 3.515602 AGGGTCAGCAGAGTGAAATTT 57.484 42.857 0.00 0.00 0.00 1.82
243 244 3.837355 AGGGTCAGCAGAGTGAAATTTT 58.163 40.909 0.00 0.00 0.00 1.82
244 245 4.218312 AGGGTCAGCAGAGTGAAATTTTT 58.782 39.130 0.00 0.00 0.00 1.94
260 261 2.702592 TTTTTCGTGACCAGGTCAGT 57.297 45.000 23.61 0.00 43.57 3.41
261 262 2.702592 TTTTCGTGACCAGGTCAGTT 57.297 45.000 23.61 0.00 43.57 3.16
262 263 2.702592 TTTCGTGACCAGGTCAGTTT 57.297 45.000 23.61 0.00 43.57 2.66
263 264 1.948104 TTCGTGACCAGGTCAGTTTG 58.052 50.000 23.61 12.88 43.57 2.93
264 265 0.828022 TCGTGACCAGGTCAGTTTGT 59.172 50.000 23.61 0.00 43.57 2.83
265 266 2.033372 TCGTGACCAGGTCAGTTTGTA 58.967 47.619 23.61 2.16 43.57 2.41
266 267 2.431419 TCGTGACCAGGTCAGTTTGTAA 59.569 45.455 23.61 0.00 43.57 2.41
267 268 3.070446 TCGTGACCAGGTCAGTTTGTAAT 59.930 43.478 23.61 0.00 43.57 1.89
268 269 3.813166 CGTGACCAGGTCAGTTTGTAATT 59.187 43.478 23.61 0.00 43.57 1.40
269 270 4.274950 CGTGACCAGGTCAGTTTGTAATTT 59.725 41.667 23.61 0.00 43.57 1.82
270 271 5.519722 GTGACCAGGTCAGTTTGTAATTTG 58.480 41.667 23.61 0.00 43.57 2.32
271 272 5.298276 GTGACCAGGTCAGTTTGTAATTTGA 59.702 40.000 23.61 0.00 43.57 2.69
272 273 6.016276 GTGACCAGGTCAGTTTGTAATTTGAT 60.016 38.462 23.61 0.00 43.57 2.57
273 274 6.549364 TGACCAGGTCAGTTTGTAATTTGATT 59.451 34.615 19.21 0.00 37.67 2.57
274 275 7.069331 TGACCAGGTCAGTTTGTAATTTGATTT 59.931 33.333 19.21 0.00 37.67 2.17
275 276 7.433680 ACCAGGTCAGTTTGTAATTTGATTTC 58.566 34.615 0.00 0.00 0.00 2.17
276 277 7.287696 ACCAGGTCAGTTTGTAATTTGATTTCT 59.712 33.333 0.00 0.00 0.00 2.52
277 278 7.596248 CCAGGTCAGTTTGTAATTTGATTTCTG 59.404 37.037 0.00 0.00 0.00 3.02
278 279 7.115378 CAGGTCAGTTTGTAATTTGATTTCTGC 59.885 37.037 0.00 0.00 0.00 4.26
279 280 6.366061 GGTCAGTTTGTAATTTGATTTCTGCC 59.634 38.462 0.00 0.00 0.00 4.85
280 281 7.147976 GTCAGTTTGTAATTTGATTTCTGCCT 58.852 34.615 0.00 0.00 0.00 4.75
281 282 7.327032 GTCAGTTTGTAATTTGATTTCTGCCTC 59.673 37.037 0.00 0.00 0.00 4.70
282 283 7.014134 TCAGTTTGTAATTTGATTTCTGCCTCA 59.986 33.333 0.00 0.00 0.00 3.86
283 284 7.327761 CAGTTTGTAATTTGATTTCTGCCTCAG 59.672 37.037 0.00 0.00 0.00 3.35
284 285 5.902613 TGTAATTTGATTTCTGCCTCAGG 57.097 39.130 0.00 0.00 31.51 3.86
285 286 5.324409 TGTAATTTGATTTCTGCCTCAGGT 58.676 37.500 0.00 0.00 31.51 4.00
286 287 5.415701 TGTAATTTGATTTCTGCCTCAGGTC 59.584 40.000 0.00 0.00 31.51 3.85
287 288 3.507162 TTTGATTTCTGCCTCAGGTCA 57.493 42.857 0.00 0.00 31.51 4.02
288 289 2.775911 TGATTTCTGCCTCAGGTCAG 57.224 50.000 8.45 8.45 31.51 3.51
289 290 2.259917 TGATTTCTGCCTCAGGTCAGA 58.740 47.619 12.37 12.37 35.35 3.27
290 291 2.842496 TGATTTCTGCCTCAGGTCAGAT 59.158 45.455 15.94 5.18 36.40 2.90
291 292 4.033009 TGATTTCTGCCTCAGGTCAGATA 58.967 43.478 15.94 12.60 36.40 1.98
292 293 4.657504 TGATTTCTGCCTCAGGTCAGATAT 59.342 41.667 15.94 15.88 36.40 1.63
293 294 4.412796 TTTCTGCCTCAGGTCAGATATG 57.587 45.455 15.94 0.00 36.40 1.78
294 295 3.037851 TCTGCCTCAGGTCAGATATGT 57.962 47.619 12.37 0.00 33.43 2.29
295 296 4.184649 TCTGCCTCAGGTCAGATATGTA 57.815 45.455 12.37 0.00 33.43 2.29
296 297 4.546674 TCTGCCTCAGGTCAGATATGTAA 58.453 43.478 12.37 0.00 33.43 2.41
297 298 5.150715 TCTGCCTCAGGTCAGATATGTAAT 58.849 41.667 12.37 0.00 33.43 1.89
298 299 5.604231 TCTGCCTCAGGTCAGATATGTAATT 59.396 40.000 12.37 0.00 33.43 1.40
299 300 6.100279 TCTGCCTCAGGTCAGATATGTAATTT 59.900 38.462 12.37 0.00 33.43 1.82
300 301 6.057533 TGCCTCAGGTCAGATATGTAATTTG 58.942 40.000 0.00 0.00 0.00 2.32
301 302 6.058183 GCCTCAGGTCAGATATGTAATTTGT 58.942 40.000 0.00 0.00 0.00 2.83
387 397 2.684374 ACCAAGAAGCGGTTAAAAACGT 59.316 40.909 0.00 0.00 30.53 3.99
399 409 0.101579 AAAAACGTGAAACCCCAGCG 59.898 50.000 0.00 0.00 0.00 5.18
401 411 2.612095 AAACGTGAAACCCCAGCGGA 62.612 55.000 0.00 0.00 34.64 5.54
479 492 1.542492 GAGGAGAGTTGACGGTGGTA 58.458 55.000 0.00 0.00 0.00 3.25
538 551 2.432628 AAAGCGCCTCGAACTCCG 60.433 61.111 2.29 0.00 40.25 4.63
564 577 0.319728 CTCATCGGAATCATCCCGCT 59.680 55.000 0.00 0.00 46.10 5.52
675 692 0.838122 ACTCCCAGTCCCTGTTCCAG 60.838 60.000 0.00 0.00 0.00 3.86
798 819 1.882352 GCTGAAAAGGCCCTCGAAAGA 60.882 52.381 0.00 0.00 39.12 2.52
799 820 2.716217 CTGAAAAGGCCCTCGAAAGAT 58.284 47.619 0.00 0.00 40.84 2.40
986 1007 3.641906 CCTCACTCCGTATTTACTCCCAT 59.358 47.826 0.00 0.00 0.00 4.00
991 1012 4.715297 ACTCCGTATTTACTCCCATCACTT 59.285 41.667 0.00 0.00 0.00 3.16
998 1019 1.356124 ACTCCCATCACTTGCTGTCT 58.644 50.000 0.00 0.00 0.00 3.41
1056 1085 1.065401 GTAGCACAAGCACAAGCAACA 59.935 47.619 0.00 0.00 45.49 3.33
1071 1100 1.972872 CAACAAGGAGCAGGACAAGT 58.027 50.000 0.00 0.00 0.00 3.16
1074 1103 1.073897 AAGGAGCAGGACAAGTGCC 59.926 57.895 0.00 0.00 42.24 5.01
1095 1124 2.192263 GTGGAAGGAAGAGATGGGAGT 58.808 52.381 0.00 0.00 0.00 3.85
1112 1147 1.470098 GAGTTTCCATCGTGCAATGCT 59.530 47.619 6.82 0.00 0.00 3.79
1113 1148 2.677836 GAGTTTCCATCGTGCAATGCTA 59.322 45.455 6.82 0.00 0.00 3.49
1114 1149 2.420022 AGTTTCCATCGTGCAATGCTAC 59.580 45.455 6.82 2.26 0.00 3.58
1129 1164 1.288037 TGCTACTCCTCCTCCTTGCTA 59.712 52.381 0.00 0.00 0.00 3.49
1130 1165 1.684450 GCTACTCCTCCTCCTTGCTAC 59.316 57.143 0.00 0.00 0.00 3.58
1138 1173 0.321653 CCTCCTTGCTACCGTTGCTT 60.322 55.000 6.52 0.00 0.00 3.91
1154 1189 1.083242 GCTTCTCTGCTCCTTGCTCG 61.083 60.000 0.00 0.00 43.37 5.03
1183 1218 0.521242 CGCAAGCATTCAAGGTACGC 60.521 55.000 0.00 0.00 0.00 4.42
1223 1269 7.432545 ACTTAATTATCGATGTCTTCACGTCAG 59.567 37.037 8.54 0.00 38.33 3.51
1338 1396 3.112709 GGTGCTGTCGCCGTTCTC 61.113 66.667 0.00 0.00 32.51 2.87
1339 1397 3.112709 GTGCTGTCGCCGTTCTCC 61.113 66.667 0.00 0.00 34.43 3.71
1340 1398 4.717629 TGCTGTCGCCGTTCTCCG 62.718 66.667 0.00 0.00 34.43 4.63
1411 1469 4.367023 CCGACGGAGCGGTGGAAA 62.367 66.667 8.64 0.00 46.07 3.13
1641 1705 3.716006 CGTCAAGCGGCAGGTGTG 61.716 66.667 1.45 0.00 36.85 3.82
1642 1706 2.591715 GTCAAGCGGCAGGTGTGT 60.592 61.111 1.45 0.00 0.00 3.72
1643 1707 1.301401 GTCAAGCGGCAGGTGTGTA 60.301 57.895 1.45 0.00 0.00 2.90
1686 1750 3.508793 CACCCACGTCTTCTCCTTTACTA 59.491 47.826 0.00 0.00 0.00 1.82
1687 1751 4.159879 CACCCACGTCTTCTCCTTTACTAT 59.840 45.833 0.00 0.00 0.00 2.12
1711 1776 3.069289 CCCTTTTGCTTCTTTTCATGCC 58.931 45.455 0.00 0.00 0.00 4.40
1724 1789 2.610859 ATGCCCCGTCAACCTCCT 60.611 61.111 0.00 0.00 0.00 3.69
1732 1797 2.500098 CCCGTCAACCTCCTTTGATCTA 59.500 50.000 0.00 0.00 37.80 1.98
1736 1801 4.425520 GTCAACCTCCTTTGATCTACTCG 58.574 47.826 0.00 0.00 37.80 4.18
1747 1812 4.186856 TGATCTACTCGCACATTTCACA 57.813 40.909 0.00 0.00 0.00 3.58
1773 1838 4.095483 CCATTCCGATTTTCCTGTTCTCTG 59.905 45.833 0.00 0.00 0.00 3.35
1838 1903 3.152400 GGCTCGACCCGGTATGGT 61.152 66.667 0.00 0.00 42.79 3.55
1851 1916 3.323758 TATGGTGCCGCTGGTGGTC 62.324 63.158 2.05 0.00 0.00 4.02
1877 1942 1.258982 CGTCATGATGGCGTCTTTAGC 59.741 52.381 11.82 0.00 41.12 3.09
1901 1966 8.819643 GCAGCTTTATTATGCTACTAGTAGTT 57.180 34.615 26.76 18.32 37.81 2.24
1902 1967 9.262358 GCAGCTTTATTATGCTACTAGTAGTTT 57.738 33.333 26.76 18.02 37.81 2.66
1971 2042 2.009774 GCAGAGCCGATGAAGCTTTTA 58.990 47.619 0.00 0.00 41.75 1.52
2050 2121 3.576550 GTCTTCCTTTATTTTGGCCACCA 59.423 43.478 3.88 0.00 0.00 4.17
2172 2249 3.639561 GTGGCAGAAAGGGGAAAGTAAAA 59.360 43.478 0.00 0.00 0.00 1.52
2176 2253 4.587262 GCAGAAAGGGGAAAGTAAAAAGGA 59.413 41.667 0.00 0.00 0.00 3.36
2206 2284 2.706723 TGCGTGGTGGTATGGGTATATT 59.293 45.455 0.00 0.00 0.00 1.28
2225 2303 9.758651 GGTATATTGTATACCGATGCATATTCA 57.241 33.333 0.00 0.00 35.25 2.57
2229 2307 7.770801 TTGTATACCGATGCATATTCATAGC 57.229 36.000 0.00 0.00 0.00 2.97
2230 2308 7.112452 TGTATACCGATGCATATTCATAGCT 57.888 36.000 0.00 0.00 0.00 3.32
2231 2309 7.203218 TGTATACCGATGCATATTCATAGCTC 58.797 38.462 0.00 0.00 0.00 4.09
2232 2310 4.541973 ACCGATGCATATTCATAGCTCA 57.458 40.909 0.00 0.00 0.00 4.26
2233 2311 4.502016 ACCGATGCATATTCATAGCTCAG 58.498 43.478 0.00 0.00 0.00 3.35
2234 2312 4.020751 ACCGATGCATATTCATAGCTCAGT 60.021 41.667 0.00 0.00 0.00 3.41
2235 2313 4.934001 CCGATGCATATTCATAGCTCAGTT 59.066 41.667 0.00 0.00 0.00 3.16
2236 2314 5.163884 CCGATGCATATTCATAGCTCAGTTG 60.164 44.000 0.00 0.00 0.00 3.16
2237 2315 5.163884 CGATGCATATTCATAGCTCAGTTGG 60.164 44.000 0.00 0.00 0.00 3.77
2238 2316 3.817084 TGCATATTCATAGCTCAGTTGGC 59.183 43.478 0.00 0.00 0.00 4.52
2239 2317 3.817084 GCATATTCATAGCTCAGTTGGCA 59.183 43.478 0.00 0.00 0.00 4.92
2240 2318 4.276678 GCATATTCATAGCTCAGTTGGCAA 59.723 41.667 0.00 0.00 0.00 4.52
2241 2319 5.562307 GCATATTCATAGCTCAGTTGGCAAG 60.562 44.000 0.00 0.00 0.00 4.01
2242 2320 2.408271 TCATAGCTCAGTTGGCAAGG 57.592 50.000 0.00 0.00 0.00 3.61
2243 2321 1.908619 TCATAGCTCAGTTGGCAAGGA 59.091 47.619 0.00 0.17 0.00 3.36
2244 2322 2.507058 TCATAGCTCAGTTGGCAAGGAT 59.493 45.455 0.00 0.00 0.00 3.24
2245 2323 3.054139 TCATAGCTCAGTTGGCAAGGATT 60.054 43.478 0.00 0.00 0.00 3.01
2259 2337 2.206576 AGGATTGAGAGTTTGCACCC 57.793 50.000 0.00 0.00 0.00 4.61
2260 2338 1.425066 AGGATTGAGAGTTTGCACCCA 59.575 47.619 0.00 0.00 0.00 4.51
2261 2339 1.815003 GGATTGAGAGTTTGCACCCAG 59.185 52.381 0.00 0.00 0.00 4.45
2262 2340 1.200948 GATTGAGAGTTTGCACCCAGC 59.799 52.381 0.00 0.00 45.96 4.85
2263 2341 0.823356 TTGAGAGTTTGCACCCAGCC 60.823 55.000 0.00 0.00 44.83 4.85
2264 2342 1.973812 GAGAGTTTGCACCCAGCCC 60.974 63.158 0.00 0.00 44.83 5.19
2265 2343 2.203480 GAGTTTGCACCCAGCCCA 60.203 61.111 0.00 0.00 44.83 5.36
2266 2344 2.521708 AGTTTGCACCCAGCCCAC 60.522 61.111 0.00 0.00 44.83 4.61
2267 2345 3.615709 GTTTGCACCCAGCCCACC 61.616 66.667 0.00 0.00 44.83 4.61
2268 2346 3.831637 TTTGCACCCAGCCCACCT 61.832 61.111 0.00 0.00 44.83 4.00
2269 2347 3.808218 TTTGCACCCAGCCCACCTC 62.808 63.158 0.00 0.00 44.83 3.85
2272 2350 2.285368 CACCCAGCCCACCTCCTA 60.285 66.667 0.00 0.00 0.00 2.94
2273 2351 2.285442 ACCCAGCCCACCTCCTAC 60.285 66.667 0.00 0.00 0.00 3.18
2274 2352 3.470888 CCCAGCCCACCTCCTACG 61.471 72.222 0.00 0.00 0.00 3.51
2275 2353 3.470888 CCAGCCCACCTCCTACGG 61.471 72.222 0.00 0.00 0.00 4.02
2276 2354 2.363795 CAGCCCACCTCCTACGGA 60.364 66.667 0.00 0.00 0.00 4.69
2277 2355 2.363925 AGCCCACCTCCTACGGAC 60.364 66.667 0.00 0.00 0.00 4.79
2278 2356 3.834799 GCCCACCTCCTACGGACG 61.835 72.222 0.00 0.00 0.00 4.79
2279 2357 3.145551 CCCACCTCCTACGGACGG 61.146 72.222 0.00 0.00 0.00 4.79
2280 2358 2.362120 CCACCTCCTACGGACGGT 60.362 66.667 0.00 0.00 34.96 4.83
2281 2359 1.077501 CCACCTCCTACGGACGGTA 60.078 63.158 0.00 0.00 33.64 4.02
2282 2360 0.680921 CCACCTCCTACGGACGGTAA 60.681 60.000 0.00 0.00 33.64 2.85
2283 2361 1.176527 CACCTCCTACGGACGGTAAA 58.823 55.000 0.00 0.00 33.64 2.01
2284 2362 1.753073 CACCTCCTACGGACGGTAAAT 59.247 52.381 0.00 0.00 33.64 1.40
2285 2363 2.027385 ACCTCCTACGGACGGTAAATC 58.973 52.381 0.00 0.00 33.64 2.17
2286 2364 1.339291 CCTCCTACGGACGGTAAATCC 59.661 57.143 0.00 0.00 0.00 3.01
2287 2365 2.026641 CTCCTACGGACGGTAAATCCA 58.973 52.381 0.00 0.00 35.83 3.41
2288 2366 2.428171 CTCCTACGGACGGTAAATCCAA 59.572 50.000 0.00 0.00 35.83 3.53
2289 2367 2.166254 TCCTACGGACGGTAAATCCAAC 59.834 50.000 0.00 0.00 35.83 3.77
2290 2368 2.543641 CTACGGACGGTAAATCCAACC 58.456 52.381 0.00 0.00 35.83 3.77
2291 2369 0.036105 ACGGACGGTAAATCCAACCC 60.036 55.000 0.00 0.00 35.83 4.11
2292 2370 0.036199 CGGACGGTAAATCCAACCCA 60.036 55.000 0.00 0.00 35.83 4.51
2293 2371 1.611148 CGGACGGTAAATCCAACCCAA 60.611 52.381 0.00 0.00 35.83 4.12
2294 2372 2.516906 GGACGGTAAATCCAACCCAAA 58.483 47.619 0.00 0.00 36.15 3.28
2295 2373 2.229543 GGACGGTAAATCCAACCCAAAC 59.770 50.000 0.00 0.00 36.15 2.93
2296 2374 2.885894 GACGGTAAATCCAACCCAAACA 59.114 45.455 0.00 0.00 33.10 2.83
2297 2375 2.888414 ACGGTAAATCCAACCCAAACAG 59.112 45.455 0.00 0.00 33.10 3.16
2298 2376 2.888414 CGGTAAATCCAACCCAAACAGT 59.112 45.455 0.00 0.00 33.10 3.55
2299 2377 3.305064 CGGTAAATCCAACCCAAACAGTG 60.305 47.826 0.00 0.00 33.10 3.66
2300 2378 3.006430 GGTAAATCCAACCCAAACAGTGG 59.994 47.826 0.00 0.00 40.78 4.00
2314 2392 7.703058 CCAAACAGTGGGATAGAAAGTATTT 57.297 36.000 0.00 0.00 44.64 1.40
2361 2439 7.539712 AATTCATGTAATTTCATCGACTCGT 57.460 32.000 0.00 0.00 33.91 4.18
2362 2440 6.961359 TTCATGTAATTTCATCGACTCGTT 57.039 33.333 0.00 0.00 0.00 3.85
2363 2441 6.331170 TCATGTAATTTCATCGACTCGTTG 57.669 37.500 3.50 3.50 0.00 4.10
2364 2442 6.096695 TCATGTAATTTCATCGACTCGTTGA 58.903 36.000 7.91 7.91 34.46 3.18
2365 2443 6.588373 TCATGTAATTTCATCGACTCGTTGAA 59.412 34.615 17.21 17.21 41.62 2.69
2369 2447 4.708868 TTTCATCGACTCGTTGAAAGTG 57.291 40.909 24.16 2.87 44.74 3.16
2370 2448 3.636282 TCATCGACTCGTTGAAAGTGA 57.364 42.857 9.31 0.00 33.56 3.41
2371 2449 3.972403 TCATCGACTCGTTGAAAGTGAA 58.028 40.909 9.31 0.00 33.56 3.18
2372 2450 4.364860 TCATCGACTCGTTGAAAGTGAAA 58.635 39.130 9.31 0.00 33.56 2.69
2373 2451 4.806775 TCATCGACTCGTTGAAAGTGAAAA 59.193 37.500 9.31 0.00 33.56 2.29
2374 2452 5.465390 TCATCGACTCGTTGAAAGTGAAAAT 59.535 36.000 9.31 0.00 33.56 1.82
2375 2453 5.324739 TCGACTCGTTGAAAGTGAAAATC 57.675 39.130 0.00 0.00 0.00 2.17
2376 2454 4.806775 TCGACTCGTTGAAAGTGAAAATCA 59.193 37.500 0.00 0.00 0.00 2.57
2427 2505 3.948719 GGGGTCCCGAACTGTGCA 61.949 66.667 0.48 0.00 0.00 4.57
2431 2509 0.535335 GGTCCCGAACTGTGCATCTA 59.465 55.000 0.00 0.00 0.00 1.98
2435 2513 1.148157 CCGAACTGTGCATCTAGGCG 61.148 60.000 0.00 0.00 36.28 5.52
2469 2548 3.551846 AGACAAGGGACACGATGTTTTT 58.448 40.909 0.00 0.00 0.00 1.94
2489 2568 3.787001 CCAGGTTCGGGCCCTCTC 61.787 72.222 22.43 9.34 0.00 3.20
2492 2571 3.155167 GGTTCGGGCCCTCTCGAT 61.155 66.667 22.43 0.00 35.25 3.59
2493 2572 2.732619 GGTTCGGGCCCTCTCGATT 61.733 63.158 22.43 0.00 35.25 3.34
2544 2623 3.754323 CCGATTAACCAGTTAACTTGCCA 59.246 43.478 5.07 0.00 37.80 4.92
2553 2632 5.186992 ACCAGTTAACTTGCCAATTAATCCC 59.813 40.000 5.07 0.00 0.00 3.85
2559 2638 4.451900 ACTTGCCAATTAATCCCTACTCG 58.548 43.478 0.00 0.00 0.00 4.18
2572 2651 1.679944 CCTACTCGTAGGGTCACCGAA 60.680 57.143 14.08 0.00 46.96 4.30
2578 2657 1.411041 GTAGGGTCACCGAATAGCCT 58.589 55.000 6.78 6.78 45.33 4.58
2588 2667 4.525487 TCACCGAATAGCCTATAAACCGAT 59.475 41.667 0.00 0.00 0.00 4.18
2594 2673 7.762615 CCGAATAGCCTATAAACCGATAAATCA 59.237 37.037 0.00 0.00 0.00 2.57
2628 2707 6.767524 TGATTAAATGGCCGATTAACTTGT 57.232 33.333 13.26 0.65 0.00 3.16
2634 2713 2.675844 TGGCCGATTAACTTGTCGATTG 59.324 45.455 0.00 0.00 40.11 2.67
2638 2717 2.675844 CGATTAACTTGTCGATTGGCCA 59.324 45.455 0.00 0.00 40.11 5.36
2654 2733 3.127250 TGGCCAATTAATCCCCTACTCA 58.873 45.455 0.61 0.00 0.00 3.41
2656 2735 3.487372 GCCAATTAATCCCCTACTCACC 58.513 50.000 0.00 0.00 0.00 4.02
2720 2800 3.344515 GGTAAAACCCTACTCCTGCTTG 58.655 50.000 0.00 0.00 30.04 4.01
2811 2891 5.832539 AGCTAGCCTATGGTATGATTGTT 57.167 39.130 12.13 0.00 0.00 2.83
2812 2892 5.555017 AGCTAGCCTATGGTATGATTGTTG 58.445 41.667 12.13 0.00 0.00 3.33
2813 2893 5.072329 AGCTAGCCTATGGTATGATTGTTGT 59.928 40.000 12.13 0.00 0.00 3.32
2815 2895 6.073003 GCTAGCCTATGGTATGATTGTTGTTC 60.073 42.308 2.29 0.00 0.00 3.18
2822 2911 5.795972 TGGTATGATTGTTGTTCGTCCTAA 58.204 37.500 0.00 0.00 0.00 2.69
2862 2952 1.926108 ATATAGACACCGGAGAGGGC 58.074 55.000 9.46 0.00 46.96 5.19
2875 2965 1.757699 GAGAGGGCTAGGGTTACACAG 59.242 57.143 0.00 0.00 0.00 3.66
2876 2966 1.361543 AGAGGGCTAGGGTTACACAGA 59.638 52.381 0.00 0.00 0.00 3.41
2888 2978 4.562143 GGGTTACACAGAGTCGGTTACAAT 60.562 45.833 0.00 0.00 0.00 2.71
2891 2981 2.289444 ACACAGAGTCGGTTACAATGGG 60.289 50.000 0.00 0.00 0.00 4.00
2899 2989 2.698797 TCGGTTACAATGGGAGGAGATC 59.301 50.000 0.00 0.00 0.00 2.75
2901 2991 3.895656 CGGTTACAATGGGAGGAGATCTA 59.104 47.826 0.00 0.00 0.00 1.98
2907 2997 6.865834 ACAATGGGAGGAGATCTACATATC 57.134 41.667 7.93 0.00 0.00 1.63
2913 3003 5.766174 GGGAGGAGATCTACATATCCGTATC 59.234 48.000 7.93 0.00 44.22 2.24
2917 3007 4.524053 AGATCTACATATCCGTATCGCCA 58.476 43.478 0.00 0.00 0.00 5.69
2926 3016 1.815421 CGTATCGCCAAGCTTGCCT 60.815 57.895 21.43 7.17 0.00 4.75
2933 3023 1.898574 CCAAGCTTGCCTTCCACGT 60.899 57.895 21.43 0.00 0.00 4.49
2934 3024 1.576421 CAAGCTTGCCTTCCACGTC 59.424 57.895 14.65 0.00 0.00 4.34
2938 3028 1.856265 GCTTGCCTTCCACGTCAAGG 61.856 60.000 15.83 15.83 43.13 3.61
2940 3030 0.181587 TTGCCTTCCACGTCAAGGAA 59.818 50.000 22.08 14.54 42.94 3.36
2949 3039 2.076863 CACGTCAAGGAAAGTCCCATC 58.923 52.381 0.00 0.00 37.19 3.51
2952 3042 1.003233 GTCAAGGAAAGTCCCATCCGT 59.997 52.381 0.00 0.00 40.78 4.69
2956 3046 1.553704 AGGAAAGTCCCATCCGTACAC 59.446 52.381 0.00 0.00 40.78 2.90
2985 3075 6.814146 ACGAAGTCTTCAATCTTGTATCTTCC 59.186 38.462 12.99 0.00 29.74 3.46
2986 3076 6.256757 CGAAGTCTTCAATCTTGTATCTTCCC 59.743 42.308 12.99 0.00 0.00 3.97
2987 3077 5.995446 AGTCTTCAATCTTGTATCTTCCCC 58.005 41.667 0.00 0.00 0.00 4.81
2988 3078 5.104318 AGTCTTCAATCTTGTATCTTCCCCC 60.104 44.000 0.00 0.00 0.00 5.40
2990 3080 6.099845 GTCTTCAATCTTGTATCTTCCCCCTA 59.900 42.308 0.00 0.00 0.00 3.53
2991 3081 6.676632 TCTTCAATCTTGTATCTTCCCCCTAA 59.323 38.462 0.00 0.00 0.00 2.69
2992 3082 7.350921 TCTTCAATCTTGTATCTTCCCCCTAAT 59.649 37.037 0.00 0.00 0.00 1.73
2993 3083 7.079451 TCAATCTTGTATCTTCCCCCTAATC 57.921 40.000 0.00 0.00 0.00 1.75
2997 3087 4.569676 TGTATCTTCCCCCTAATCCAGA 57.430 45.455 0.00 0.00 0.00 3.86
2999 3089 2.961536 TCTTCCCCCTAATCCAGACA 57.038 50.000 0.00 0.00 0.00 3.41
3000 3090 3.438131 TCTTCCCCCTAATCCAGACAT 57.562 47.619 0.00 0.00 0.00 3.06
3001 3091 3.318313 TCTTCCCCCTAATCCAGACATC 58.682 50.000 0.00 0.00 0.00 3.06
3002 3092 2.118403 TCCCCCTAATCCAGACATCC 57.882 55.000 0.00 0.00 0.00 3.51
3003 3093 0.687354 CCCCCTAATCCAGACATCCG 59.313 60.000 0.00 0.00 0.00 4.18
3004 3094 0.687354 CCCCTAATCCAGACATCCGG 59.313 60.000 0.00 0.00 0.00 5.14
3009 3099 0.331278 AATCCAGACATCCGGCCAAA 59.669 50.000 2.24 0.00 0.00 3.28
3012 3102 1.002134 CAGACATCCGGCCAAAGGT 60.002 57.895 2.24 0.00 0.00 3.50
3013 3103 1.026718 CAGACATCCGGCCAAAGGTC 61.027 60.000 2.24 7.34 0.00 3.85
3024 3114 0.463833 CCAAAGGTCATAGTCCGGCC 60.464 60.000 0.00 0.00 0.00 6.13
3025 3115 0.251916 CAAAGGTCATAGTCCGGCCA 59.748 55.000 2.24 0.00 0.00 5.36
3029 3119 1.407656 GGTCATAGTCCGGCCATCCA 61.408 60.000 2.24 0.00 0.00 3.41
3030 3120 0.034059 GTCATAGTCCGGCCATCCAG 59.966 60.000 2.24 0.00 0.00 3.86
3032 3122 0.034059 CATAGTCCGGCCATCCAGAC 59.966 60.000 2.24 0.83 39.55 3.51
3045 3135 0.689745 TCCAGACACCCCCTAATCCG 60.690 60.000 0.00 0.00 0.00 4.18
3047 3137 0.689745 CAGACACCCCCTAATCCGGA 60.690 60.000 6.61 6.61 0.00 5.14
3055 3145 1.049402 CCCTAATCCGGAACTCCCTC 58.951 60.000 9.01 0.00 0.00 4.30
3065 3155 1.307084 AACTCCCTCAGTAGCCCCC 60.307 63.158 0.00 0.00 32.30 5.40
3098 3188 2.579787 GACGATGAGTCCGGTGCG 60.580 66.667 0.00 0.00 43.95 5.34
3102 3192 3.356639 GATGAGTCCGGTGCGCAGA 62.357 63.158 12.22 0.66 0.00 4.26
3103 3193 2.635229 GATGAGTCCGGTGCGCAGAT 62.635 60.000 12.22 0.00 0.00 2.90
3113 3203 0.179215 GTGCGCAGATTTGTCTTCGG 60.179 55.000 12.22 0.00 0.00 4.30
3121 3211 2.163010 AGATTTGTCTTCGGCATTGCAG 59.837 45.455 11.39 6.72 0.00 4.41
3123 3213 1.865788 TTGTCTTCGGCATTGCAGGC 61.866 55.000 11.39 1.42 0.00 4.85
3136 3228 3.068881 CAGGCGGGTTCTTCTCCA 58.931 61.111 0.00 0.00 0.00 3.86
3140 3232 1.075536 AGGCGGGTTCTTCTCCAAATT 59.924 47.619 0.00 0.00 0.00 1.82
3141 3233 1.472878 GGCGGGTTCTTCTCCAAATTC 59.527 52.381 0.00 0.00 0.00 2.17
3142 3234 1.472878 GCGGGTTCTTCTCCAAATTCC 59.527 52.381 0.00 0.00 0.00 3.01
3143 3235 2.790433 CGGGTTCTTCTCCAAATTCCA 58.210 47.619 0.00 0.00 0.00 3.53
3144 3236 3.356290 CGGGTTCTTCTCCAAATTCCAT 58.644 45.455 0.00 0.00 0.00 3.41
3145 3237 4.523083 CGGGTTCTTCTCCAAATTCCATA 58.477 43.478 0.00 0.00 0.00 2.74
3146 3238 5.133221 CGGGTTCTTCTCCAAATTCCATAT 58.867 41.667 0.00 0.00 0.00 1.78
3147 3239 6.296026 CGGGTTCTTCTCCAAATTCCATATA 58.704 40.000 0.00 0.00 0.00 0.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.700350 CCCCACCCTCTCTCCCCT 61.700 72.222 0.00 0.00 0.00 4.79
3 4 4.741239 TGGCCCCACCCTCTCTCC 62.741 72.222 0.00 0.00 37.83 3.71
4 5 3.086600 CTGGCCCCACCCTCTCTC 61.087 72.222 0.00 0.00 37.83 3.20
16 17 2.991540 GTTCCACTTGGGCTGGCC 60.992 66.667 14.23 14.23 36.21 5.36
17 18 2.203480 TGTTCCACTTGGGCTGGC 60.203 61.111 0.00 0.00 36.21 4.85
18 19 1.152777 TGTGTTCCACTTGGGCTGG 60.153 57.895 0.00 0.00 35.11 4.85
19 20 0.179020 TCTGTGTTCCACTTGGGCTG 60.179 55.000 0.00 0.00 35.11 4.85
20 21 0.179018 GTCTGTGTTCCACTTGGGCT 60.179 55.000 0.00 0.00 35.11 5.19
21 22 0.179018 AGTCTGTGTTCCACTTGGGC 60.179 55.000 0.00 0.00 35.11 5.36
22 23 1.134098 ACAGTCTGTGTTCCACTTGGG 60.134 52.381 4.21 0.00 34.94 4.12
23 24 1.942657 CACAGTCTGTGTTCCACTTGG 59.057 52.381 22.62 0.00 43.08 3.61
34 35 2.111878 GGGCACTGCACAGTCTGT 59.888 61.111 0.00 0.00 40.20 3.41
35 36 1.512996 CTTGGGCACTGCACAGTCTG 61.513 60.000 5.99 0.00 45.08 3.51
36 37 1.228063 CTTGGGCACTGCACAGTCT 60.228 57.895 5.99 0.00 45.08 3.24
37 38 1.227943 TCTTGGGCACTGCACAGTC 60.228 57.895 5.99 0.00 45.08 3.51
38 39 1.228063 CTCTTGGGCACTGCACAGT 60.228 57.895 5.99 0.00 45.08 3.55
39 40 2.623915 GCTCTTGGGCACTGCACAG 61.624 63.158 5.99 1.46 45.08 3.66
40 41 1.767654 TAGCTCTTGGGCACTGCACA 61.768 55.000 0.41 0.41 41.67 4.57
41 42 1.003355 TAGCTCTTGGGCACTGCAC 60.003 57.895 2.82 0.00 34.17 4.57
42 43 1.297689 CTAGCTCTTGGGCACTGCA 59.702 57.895 2.82 0.00 34.17 4.41
43 44 1.451028 CCTAGCTCTTGGGCACTGC 60.451 63.158 0.00 0.00 34.17 4.40
44 45 1.451028 GCCTAGCTCTTGGGCACTG 60.451 63.158 12.89 0.00 44.69 3.66
45 46 2.993853 GCCTAGCTCTTGGGCACT 59.006 61.111 12.89 0.00 44.69 4.40
46 47 2.512515 CGCCTAGCTCTTGGGCAC 60.513 66.667 16.39 0.00 45.50 5.01
47 48 4.473520 GCGCCTAGCTCTTGGGCA 62.474 66.667 16.39 0.00 45.50 5.36
57 58 0.933097 CTGTAATGTGCAGCGCCTAG 59.067 55.000 2.29 0.00 0.00 3.02
58 59 0.461870 CCTGTAATGTGCAGCGCCTA 60.462 55.000 2.29 0.00 32.93 3.93
59 60 1.746615 CCTGTAATGTGCAGCGCCT 60.747 57.895 2.29 0.00 32.93 5.52
60 61 2.040544 ACCTGTAATGTGCAGCGCC 61.041 57.895 2.29 0.00 32.93 6.53
61 62 1.135315 CACCTGTAATGTGCAGCGC 59.865 57.895 0.00 0.00 32.93 5.92
62 63 0.166597 CACACCTGTAATGTGCAGCG 59.833 55.000 0.00 0.00 40.94 5.18
63 64 0.523072 CCACACCTGTAATGTGCAGC 59.477 55.000 0.00 0.00 45.05 5.25
64 65 0.523072 GCCACACCTGTAATGTGCAG 59.477 55.000 0.00 0.00 45.05 4.41
65 66 1.233950 CGCCACACCTGTAATGTGCA 61.234 55.000 0.00 0.00 45.05 4.57
66 67 1.501741 CGCCACACCTGTAATGTGC 59.498 57.895 0.00 0.00 45.05 4.57
67 68 1.501741 GCGCCACACCTGTAATGTG 59.498 57.895 0.00 0.00 45.81 3.21
68 69 1.674322 GGCGCCACACCTGTAATGT 60.674 57.895 24.80 0.00 0.00 2.71
69 70 0.107897 TAGGCGCCACACCTGTAATG 60.108 55.000 31.54 0.00 38.26 1.90
70 71 0.616371 TTAGGCGCCACACCTGTAAT 59.384 50.000 31.54 5.89 38.26 1.89
71 72 0.036765 CTTAGGCGCCACACCTGTAA 60.037 55.000 31.54 15.25 38.26 2.41
72 73 1.189524 ACTTAGGCGCCACACCTGTA 61.190 55.000 31.54 7.29 38.26 2.74
73 74 2.347490 CTTAGGCGCCACACCTGT 59.653 61.111 31.54 8.51 38.26 4.00
74 75 1.741770 GACTTAGGCGCCACACCTG 60.742 63.158 31.54 14.27 38.26 4.00
75 76 1.481056 AAGACTTAGGCGCCACACCT 61.481 55.000 31.54 15.57 41.57 4.00
76 77 0.248289 TAAGACTTAGGCGCCACACC 59.752 55.000 31.54 13.38 0.00 4.16
77 78 1.641577 CTAAGACTTAGGCGCCACAC 58.358 55.000 31.54 14.68 0.00 3.82
78 79 0.535335 CCTAAGACTTAGGCGCCACA 59.465 55.000 31.54 13.75 45.72 4.17
79 80 3.364277 CCTAAGACTTAGGCGCCAC 57.636 57.895 31.54 13.93 45.72 5.01
86 87 3.433615 GCACTGCAACACCTAAGACTTAG 59.566 47.826 14.35 14.35 0.00 2.18
87 88 3.071023 AGCACTGCAACACCTAAGACTTA 59.929 43.478 3.30 0.00 0.00 2.24
88 89 2.158755 AGCACTGCAACACCTAAGACTT 60.159 45.455 3.30 0.00 0.00 3.01
89 90 1.417890 AGCACTGCAACACCTAAGACT 59.582 47.619 3.30 0.00 0.00 3.24
90 91 1.532868 CAGCACTGCAACACCTAAGAC 59.467 52.381 3.30 0.00 0.00 3.01
91 92 1.140852 ACAGCACTGCAACACCTAAGA 59.859 47.619 3.30 0.00 0.00 2.10
92 93 1.532868 GACAGCACTGCAACACCTAAG 59.467 52.381 3.30 0.00 0.00 2.18
93 94 1.140852 AGACAGCACTGCAACACCTAA 59.859 47.619 3.30 0.00 0.00 2.69
94 95 0.758734 AGACAGCACTGCAACACCTA 59.241 50.000 3.30 0.00 0.00 3.08
95 96 0.816825 CAGACAGCACTGCAACACCT 60.817 55.000 3.30 0.00 0.00 4.00
96 97 1.097547 ACAGACAGCACTGCAACACC 61.098 55.000 3.30 0.00 41.06 4.16
97 98 0.028505 CACAGACAGCACTGCAACAC 59.971 55.000 3.30 0.00 41.06 3.32
98 99 1.096967 CCACAGACAGCACTGCAACA 61.097 55.000 3.30 0.00 41.06 3.33
99 100 1.650912 CCACAGACAGCACTGCAAC 59.349 57.895 3.30 0.00 41.06 4.17
100 101 1.526686 CCCACAGACAGCACTGCAA 60.527 57.895 3.30 0.00 41.06 4.08
101 102 2.111669 CCCACAGACAGCACTGCA 59.888 61.111 3.30 0.00 41.06 4.41
102 103 2.670934 CCCCACAGACAGCACTGC 60.671 66.667 0.00 0.00 41.06 4.40
103 104 2.670934 GCCCCACAGACAGCACTG 60.671 66.667 0.00 0.00 42.78 3.66
104 105 3.958860 GGCCCCACAGACAGCACT 61.959 66.667 0.00 0.00 0.00 4.40
108 109 4.641645 TTGCGGCCCCACAGACAG 62.642 66.667 0.00 0.00 0.00 3.51
109 110 4.947147 GTTGCGGCCCCACAGACA 62.947 66.667 0.00 0.00 0.00 3.41
110 111 3.248446 TAGTTGCGGCCCCACAGAC 62.248 63.158 0.00 0.00 0.00 3.51
111 112 2.925706 TAGTTGCGGCCCCACAGA 60.926 61.111 0.00 0.00 0.00 3.41
112 113 2.436646 CTAGTTGCGGCCCCACAG 60.437 66.667 0.00 0.00 0.00 3.66
113 114 2.925706 TCTAGTTGCGGCCCCACA 60.926 61.111 0.00 0.00 0.00 4.17
114 115 2.436115 GTCTAGTTGCGGCCCCAC 60.436 66.667 0.00 0.00 0.00 4.61
115 116 3.712907 GGTCTAGTTGCGGCCCCA 61.713 66.667 0.00 0.00 0.00 4.96
116 117 3.682292 CTGGTCTAGTTGCGGCCCC 62.682 68.421 0.00 0.00 0.00 5.80
117 118 2.125106 CTGGTCTAGTTGCGGCCC 60.125 66.667 0.00 0.00 0.00 5.80
118 119 2.125106 CCTGGTCTAGTTGCGGCC 60.125 66.667 0.00 0.00 0.00 6.13
119 120 2.125106 CCCTGGTCTAGTTGCGGC 60.125 66.667 0.00 0.00 0.00 6.53
120 121 2.125106 GCCCTGGTCTAGTTGCGG 60.125 66.667 0.00 0.00 0.00 5.69
121 122 1.448540 CAGCCCTGGTCTAGTTGCG 60.449 63.158 0.00 0.00 0.00 4.85
122 123 1.746991 GCAGCCCTGGTCTAGTTGC 60.747 63.158 0.00 0.00 0.00 4.17
123 124 1.078143 GGCAGCCCTGGTCTAGTTG 60.078 63.158 0.00 0.00 0.00 3.16
124 125 1.538876 TGGCAGCCCTGGTCTAGTT 60.539 57.895 9.64 0.00 0.00 2.24
125 126 2.122729 TGGCAGCCCTGGTCTAGT 59.877 61.111 9.64 0.00 0.00 2.57
126 127 2.586792 GTGGCAGCCCTGGTCTAG 59.413 66.667 9.64 0.00 0.00 2.43
127 128 3.390521 CGTGGCAGCCCTGGTCTA 61.391 66.667 9.64 0.00 0.00 2.59
140 141 3.129502 CACATCCTGCCAGCGTGG 61.130 66.667 0.25 0.25 41.55 4.94
141 142 3.807538 GCACATCCTGCCAGCGTG 61.808 66.667 3.57 3.57 40.42 5.34
144 145 3.503363 GTCGCACATCCTGCCAGC 61.503 66.667 0.00 0.00 43.84 4.85
145 146 3.190849 CGTCGCACATCCTGCCAG 61.191 66.667 0.00 0.00 43.84 4.85
148 149 3.716539 TAGGCGTCGCACATCCTGC 62.717 63.158 20.50 0.00 43.21 4.85
149 150 1.148157 CTTAGGCGTCGCACATCCTG 61.148 60.000 20.50 0.00 0.00 3.86
150 151 1.141881 CTTAGGCGTCGCACATCCT 59.858 57.895 20.50 8.84 0.00 3.24
151 152 1.883084 CCTTAGGCGTCGCACATCC 60.883 63.158 20.50 0.35 0.00 3.51
152 153 1.883084 CCCTTAGGCGTCGCACATC 60.883 63.158 20.50 0.77 0.00 3.06
153 154 1.895020 TTCCCTTAGGCGTCGCACAT 61.895 55.000 20.50 6.81 0.00 3.21
154 155 2.501223 CTTCCCTTAGGCGTCGCACA 62.501 60.000 20.50 2.32 0.00 4.57
155 156 1.810030 CTTCCCTTAGGCGTCGCAC 60.810 63.158 20.50 8.57 0.00 5.34
156 157 2.577059 CTTCCCTTAGGCGTCGCA 59.423 61.111 20.50 0.00 0.00 5.10
157 158 2.202892 CCTTCCCTTAGGCGTCGC 60.203 66.667 9.22 9.22 0.00 5.19
158 159 2.499685 CCCTTCCCTTAGGCGTCG 59.500 66.667 0.00 0.00 33.73 5.12
159 160 2.189784 GCCCTTCCCTTAGGCGTC 59.810 66.667 0.00 0.00 36.84 5.19
162 163 3.798511 AGCGCCCTTCCCTTAGGC 61.799 66.667 2.29 0.00 43.53 3.93
163 164 2.190578 CAGCGCCCTTCCCTTAGG 59.809 66.667 2.29 0.00 34.92 2.69
164 165 2.514824 GCAGCGCCCTTCCCTTAG 60.515 66.667 2.29 0.00 0.00 2.18
165 166 3.326578 TGCAGCGCCCTTCCCTTA 61.327 61.111 2.29 0.00 0.00 2.69
169 170 3.605749 TACTGTGCAGCGCCCTTCC 62.606 63.158 2.29 0.00 0.00 3.46
170 171 2.047274 TACTGTGCAGCGCCCTTC 60.047 61.111 2.29 0.00 0.00 3.46
171 172 2.046892 CTACTGTGCAGCGCCCTT 60.047 61.111 2.29 0.00 0.00 3.95
172 173 4.087892 CCTACTGTGCAGCGCCCT 62.088 66.667 2.29 0.00 0.00 5.19
174 175 4.394712 ACCCTACTGTGCAGCGCC 62.395 66.667 2.29 0.00 0.00 6.53
175 176 3.121030 CACCCTACTGTGCAGCGC 61.121 66.667 0.00 0.00 0.00 5.92
181 182 3.876589 AACGCCGCACCCTACTGTG 62.877 63.158 0.00 0.00 39.29 3.66
182 183 3.584868 GAACGCCGCACCCTACTGT 62.585 63.158 0.00 0.00 0.00 3.55
183 184 2.813908 GAACGCCGCACCCTACTG 60.814 66.667 0.00 0.00 0.00 2.74
184 185 3.296709 CTGAACGCCGCACCCTACT 62.297 63.158 0.00 0.00 0.00 2.57
185 186 2.813908 CTGAACGCCGCACCCTAC 60.814 66.667 0.00 0.00 0.00 3.18
186 187 4.752879 GCTGAACGCCGCACCCTA 62.753 66.667 0.00 0.00 0.00 3.53
190 191 4.077188 GACAGCTGAACGCCGCAC 62.077 66.667 23.35 0.00 40.39 5.34
191 192 4.600576 TGACAGCTGAACGCCGCA 62.601 61.111 23.35 3.66 40.39 5.69
192 193 3.782244 CTGACAGCTGAACGCCGC 61.782 66.667 23.35 0.98 40.39 6.53
193 194 3.114616 CCTGACAGCTGAACGCCG 61.115 66.667 23.35 3.14 40.39 6.46
194 195 3.426568 GCCTGACAGCTGAACGCC 61.427 66.667 23.35 4.40 40.39 5.68
195 196 3.782244 CGCCTGACAGCTGAACGC 61.782 66.667 23.35 14.47 39.57 4.84
196 197 3.782244 GCGCCTGACAGCTGAACG 61.782 66.667 23.35 16.19 0.00 3.95
197 198 3.426568 GGCGCCTGACAGCTGAAC 61.427 66.667 23.35 14.31 0.00 3.18
198 199 3.939939 TGGCGCCTGACAGCTGAA 61.940 61.111 29.70 7.24 0.00 3.02
199 200 4.687215 GTGGCGCCTGACAGCTGA 62.687 66.667 29.70 0.00 29.71 4.26
200 201 4.994471 TGTGGCGCCTGACAGCTG 62.994 66.667 29.70 13.48 29.71 4.24
201 202 4.996434 GTGTGGCGCCTGACAGCT 62.996 66.667 29.70 0.00 29.71 4.24
203 204 4.624364 TGGTGTGGCGCCTGACAG 62.624 66.667 29.70 0.00 29.71 3.51
204 205 3.705934 TTTGGTGTGGCGCCTGACA 62.706 57.895 29.70 21.98 34.70 3.58
205 206 2.904866 TTTGGTGTGGCGCCTGAC 60.905 61.111 29.70 22.60 34.70 3.51
206 207 2.594303 CTTTGGTGTGGCGCCTGA 60.594 61.111 29.70 11.36 34.70 3.86
207 208 3.673484 CCTTTGGTGTGGCGCCTG 61.673 66.667 29.70 7.09 34.70 4.85
208 209 4.974721 CCCTTTGGTGTGGCGCCT 62.975 66.667 29.70 0.00 34.70 5.52
218 219 0.397941 TCACTCTGCTGACCCTTTGG 59.602 55.000 0.00 0.00 37.80 3.28
219 220 2.260844 TTCACTCTGCTGACCCTTTG 57.739 50.000 0.00 0.00 0.00 2.77
220 221 3.515602 ATTTCACTCTGCTGACCCTTT 57.484 42.857 0.00 0.00 0.00 3.11
221 222 3.515602 AATTTCACTCTGCTGACCCTT 57.484 42.857 0.00 0.00 0.00 3.95
222 223 3.515602 AAATTTCACTCTGCTGACCCT 57.484 42.857 0.00 0.00 0.00 4.34
223 224 4.590850 AAAAATTTCACTCTGCTGACCC 57.409 40.909 0.00 0.00 0.00 4.46
241 242 2.702592 ACTGACCTGGTCACGAAAAA 57.297 45.000 25.12 3.01 37.67 1.94
242 243 2.680841 CAAACTGACCTGGTCACGAAAA 59.319 45.455 25.12 3.76 37.67 2.29
243 244 2.285083 CAAACTGACCTGGTCACGAAA 58.715 47.619 25.12 4.52 37.67 3.46
244 245 1.208535 ACAAACTGACCTGGTCACGAA 59.791 47.619 25.12 4.91 37.67 3.85
245 246 0.828022 ACAAACTGACCTGGTCACGA 59.172 50.000 25.12 5.29 37.67 4.35
246 247 2.519377 TACAAACTGACCTGGTCACG 57.481 50.000 25.12 21.22 37.67 4.35
247 248 5.298276 TCAAATTACAAACTGACCTGGTCAC 59.702 40.000 25.12 1.62 37.67 3.67
248 249 5.441500 TCAAATTACAAACTGACCTGGTCA 58.558 37.500 26.79 26.79 40.50 4.02
249 250 6.575162 ATCAAATTACAAACTGACCTGGTC 57.425 37.500 19.96 19.96 0.00 4.02
250 251 6.976934 AATCAAATTACAAACTGACCTGGT 57.023 33.333 0.00 0.00 0.00 4.00
251 252 7.596248 CAGAAATCAAATTACAAACTGACCTGG 59.404 37.037 0.00 0.00 0.00 4.45
252 253 7.115378 GCAGAAATCAAATTACAAACTGACCTG 59.885 37.037 0.00 0.00 0.00 4.00
253 254 7.147976 GCAGAAATCAAATTACAAACTGACCT 58.852 34.615 0.00 0.00 0.00 3.85
254 255 6.366061 GGCAGAAATCAAATTACAAACTGACC 59.634 38.462 0.00 0.00 0.00 4.02
255 256 7.147976 AGGCAGAAATCAAATTACAAACTGAC 58.852 34.615 0.00 0.00 0.00 3.51
256 257 7.014134 TGAGGCAGAAATCAAATTACAAACTGA 59.986 33.333 0.00 0.00 0.00 3.41
257 258 7.147312 TGAGGCAGAAATCAAATTACAAACTG 58.853 34.615 0.00 0.00 0.00 3.16
258 259 7.288810 TGAGGCAGAAATCAAATTACAAACT 57.711 32.000 0.00 0.00 0.00 2.66
259 260 6.587608 CCTGAGGCAGAAATCAAATTACAAAC 59.412 38.462 0.00 0.00 32.44 2.93
260 261 6.267471 ACCTGAGGCAGAAATCAAATTACAAA 59.733 34.615 0.00 0.00 32.44 2.83
261 262 5.774690 ACCTGAGGCAGAAATCAAATTACAA 59.225 36.000 0.00 0.00 32.44 2.41
262 263 5.324409 ACCTGAGGCAGAAATCAAATTACA 58.676 37.500 0.00 0.00 32.44 2.41
263 264 5.415701 TGACCTGAGGCAGAAATCAAATTAC 59.584 40.000 0.00 0.00 32.44 1.89
264 265 5.569355 TGACCTGAGGCAGAAATCAAATTA 58.431 37.500 0.00 0.00 32.44 1.40
265 266 4.410099 TGACCTGAGGCAGAAATCAAATT 58.590 39.130 0.00 0.00 32.44 1.82
266 267 4.015084 CTGACCTGAGGCAGAAATCAAAT 58.985 43.478 15.03 0.00 32.44 2.32
267 268 3.072915 TCTGACCTGAGGCAGAAATCAAA 59.927 43.478 18.82 0.38 34.66 2.69
268 269 2.639347 TCTGACCTGAGGCAGAAATCAA 59.361 45.455 18.82 0.96 34.66 2.57
269 270 2.259917 TCTGACCTGAGGCAGAAATCA 58.740 47.619 18.82 5.33 34.66 2.57
270 271 3.557228 ATCTGACCTGAGGCAGAAATC 57.443 47.619 22.88 4.01 38.54 2.17
271 272 4.411540 ACATATCTGACCTGAGGCAGAAAT 59.588 41.667 22.88 13.76 38.54 2.17
272 273 3.776969 ACATATCTGACCTGAGGCAGAAA 59.223 43.478 22.88 7.84 38.54 2.52
273 274 3.378512 ACATATCTGACCTGAGGCAGAA 58.621 45.455 22.88 15.15 38.54 3.02
274 275 3.037851 ACATATCTGACCTGAGGCAGA 57.962 47.619 21.84 21.84 39.05 4.26
275 276 4.944619 TTACATATCTGACCTGAGGCAG 57.055 45.455 14.27 14.27 0.00 4.85
276 277 5.894298 AATTACATATCTGACCTGAGGCA 57.106 39.130 0.00 0.00 0.00 4.75
277 278 6.058183 ACAAATTACATATCTGACCTGAGGC 58.942 40.000 0.00 0.00 0.00 4.70
278 279 7.275183 TGACAAATTACATATCTGACCTGAGG 58.725 38.462 0.00 0.00 0.00 3.86
279 280 7.042187 GCTGACAAATTACATATCTGACCTGAG 60.042 40.741 0.00 0.00 0.00 3.35
280 281 6.763135 GCTGACAAATTACATATCTGACCTGA 59.237 38.462 0.00 0.00 0.00 3.86
281 282 6.539826 TGCTGACAAATTACATATCTGACCTG 59.460 38.462 0.00 0.00 0.00 4.00
282 283 6.653020 TGCTGACAAATTACATATCTGACCT 58.347 36.000 0.00 0.00 0.00 3.85
283 284 6.925610 TGCTGACAAATTACATATCTGACC 57.074 37.500 0.00 0.00 0.00 4.02
284 285 7.286508 CGATGCTGACAAATTACATATCTGAC 58.713 38.462 0.00 0.00 0.00 3.51
285 286 6.073602 GCGATGCTGACAAATTACATATCTGA 60.074 38.462 0.00 0.00 0.00 3.27
286 287 6.075918 GCGATGCTGACAAATTACATATCTG 58.924 40.000 0.00 0.00 0.00 2.90
287 288 5.759763 TGCGATGCTGACAAATTACATATCT 59.240 36.000 0.00 0.00 0.00 1.98
288 289 5.989249 TGCGATGCTGACAAATTACATATC 58.011 37.500 0.00 0.00 0.00 1.63
289 290 6.376177 CATGCGATGCTGACAAATTACATAT 58.624 36.000 0.00 0.00 0.00 1.78
290 291 5.750650 CATGCGATGCTGACAAATTACATA 58.249 37.500 0.00 0.00 0.00 2.29
291 292 4.603985 CATGCGATGCTGACAAATTACAT 58.396 39.130 0.00 0.00 0.00 2.29
292 293 4.018649 CATGCGATGCTGACAAATTACA 57.981 40.909 0.00 0.00 0.00 2.41
387 397 4.323477 CCGTCCGCTGGGGTTTCA 62.323 66.667 10.81 0.00 37.00 2.69
435 445 2.825982 CTGTCCCGGTCACCAACA 59.174 61.111 0.00 0.00 0.00 3.33
675 692 1.300697 ACGGACGAACAGAAGGTGC 60.301 57.895 0.00 0.00 0.00 5.01
798 819 0.822164 ACTAAAGCACGGACGCCTAT 59.178 50.000 0.00 0.00 0.00 2.57
799 820 1.462616 TACTAAAGCACGGACGCCTA 58.537 50.000 0.00 0.00 0.00 3.93
986 1007 1.300931 GTGGCGAGACAGCAAGTGA 60.301 57.895 0.00 0.00 39.27 3.41
1056 1085 1.073897 GGCACTTGTCCTGCTCCTT 59.926 57.895 0.00 0.00 34.84 3.36
1071 1100 0.250234 CATCTCTTCCTTCCACGGCA 59.750 55.000 0.00 0.00 0.00 5.69
1074 1103 1.137872 CTCCCATCTCTTCCTTCCACG 59.862 57.143 0.00 0.00 0.00 4.94
1095 1124 2.677836 GAGTAGCATTGCACGATGGAAA 59.322 45.455 11.91 0.00 29.75 3.13
1101 1130 0.175760 GGAGGAGTAGCATTGCACGA 59.824 55.000 11.91 0.00 0.00 4.35
1112 1147 1.409802 CGGTAGCAAGGAGGAGGAGTA 60.410 57.143 0.00 0.00 0.00 2.59
1113 1148 0.684805 CGGTAGCAAGGAGGAGGAGT 60.685 60.000 0.00 0.00 0.00 3.85
1114 1149 0.684805 ACGGTAGCAAGGAGGAGGAG 60.685 60.000 0.00 0.00 0.00 3.69
1129 1164 1.004440 GGAGCAGAGAAGCAACGGT 60.004 57.895 0.00 0.00 36.85 4.83
1130 1165 0.321122 AAGGAGCAGAGAAGCAACGG 60.321 55.000 0.00 0.00 36.85 4.44
1154 1189 2.257286 AATGCTTGCGACGGATGCAC 62.257 55.000 27.42 2.98 43.10 4.57
1200 1246 6.183360 ACCTGACGTGAAGACATCGATAATTA 60.183 38.462 0.00 0.00 0.00 1.40
1223 1269 4.107622 ACGCAGTGTTATATTCACGTACC 58.892 43.478 0.00 0.00 42.51 3.34
1640 1704 4.118995 CCGGCGGCACTACGTACA 62.119 66.667 15.42 0.00 35.98 2.90
1641 1705 3.631487 AACCGGCGGCACTACGTAC 62.631 63.158 28.71 0.00 35.98 3.67
1642 1706 3.340953 GAACCGGCGGCACTACGTA 62.341 63.158 28.71 0.00 35.98 3.57
1643 1707 4.729856 GAACCGGCGGCACTACGT 62.730 66.667 28.71 0.15 35.98 3.57
1686 1750 5.568223 GCATGAAAAGAAGCAAAAGGGAGAT 60.568 40.000 0.00 0.00 0.00 2.75
1687 1751 4.262164 GCATGAAAAGAAGCAAAAGGGAGA 60.262 41.667 0.00 0.00 0.00 3.71
1711 1776 1.279271 AGATCAAAGGAGGTTGACGGG 59.721 52.381 0.00 0.00 40.22 5.28
1724 1789 4.994217 TGTGAAATGTGCGAGTAGATCAAA 59.006 37.500 0.00 0.00 0.00 2.69
1732 1797 0.944386 GGTGTGTGAAATGTGCGAGT 59.056 50.000 0.00 0.00 0.00 4.18
1736 1801 2.676076 GGAATGGTGTGTGAAATGTGC 58.324 47.619 0.00 0.00 0.00 4.57
1747 1812 3.154827 ACAGGAAAATCGGAATGGTGT 57.845 42.857 0.00 0.00 0.00 4.16
1773 1838 8.336806 TGCAAAAGATGAATCAAAATGTCAAAC 58.663 29.630 0.00 0.00 0.00 2.93
1851 1916 2.969238 GCCATCATGACGAGCCCG 60.969 66.667 0.00 0.00 42.50 6.13
1919 1984 3.274288 ACGGCTACTACCACTACTACAC 58.726 50.000 0.00 0.00 0.00 2.90
1971 2042 4.457257 CAGCGAGAAAGGAGGAGAAAAATT 59.543 41.667 0.00 0.00 0.00 1.82
2050 2121 4.042684 AGGAGCAGAAAGGAAGACAAAGAT 59.957 41.667 0.00 0.00 0.00 2.40
2206 2284 7.112452 AGCTATGAATATGCATCGGTATACA 57.888 36.000 0.19 0.00 0.00 2.29
2225 2303 3.054139 TCAATCCTTGCCAACTGAGCTAT 60.054 43.478 0.00 0.00 0.00 2.97
2226 2304 2.305635 TCAATCCTTGCCAACTGAGCTA 59.694 45.455 0.00 0.00 0.00 3.32
2227 2305 1.074405 TCAATCCTTGCCAACTGAGCT 59.926 47.619 0.00 0.00 0.00 4.09
2228 2306 1.471684 CTCAATCCTTGCCAACTGAGC 59.528 52.381 0.00 0.00 0.00 4.26
2229 2307 3.008330 CTCTCAATCCTTGCCAACTGAG 58.992 50.000 0.00 0.00 33.21 3.35
2230 2308 2.373169 ACTCTCAATCCTTGCCAACTGA 59.627 45.455 0.00 0.00 0.00 3.41
2231 2309 2.787994 ACTCTCAATCCTTGCCAACTG 58.212 47.619 0.00 0.00 0.00 3.16
2232 2310 3.515602 AACTCTCAATCCTTGCCAACT 57.484 42.857 0.00 0.00 0.00 3.16
2233 2311 3.858503 GCAAACTCTCAATCCTTGCCAAC 60.859 47.826 0.00 0.00 37.10 3.77
2234 2312 2.297033 GCAAACTCTCAATCCTTGCCAA 59.703 45.455 0.00 0.00 37.10 4.52
2235 2313 1.888512 GCAAACTCTCAATCCTTGCCA 59.111 47.619 0.00 0.00 37.10 4.92
2236 2314 1.888512 TGCAAACTCTCAATCCTTGCC 59.111 47.619 2.93 0.00 41.29 4.52
2237 2315 2.352127 GGTGCAAACTCTCAATCCTTGC 60.352 50.000 0.00 0.00 42.12 4.01
2238 2316 2.229784 GGGTGCAAACTCTCAATCCTTG 59.770 50.000 0.00 0.00 0.00 3.61
2239 2317 2.158475 TGGGTGCAAACTCTCAATCCTT 60.158 45.455 0.00 0.00 0.00 3.36
2240 2318 1.425066 TGGGTGCAAACTCTCAATCCT 59.575 47.619 0.00 0.00 0.00 3.24
2241 2319 1.815003 CTGGGTGCAAACTCTCAATCC 59.185 52.381 0.00 0.00 0.00 3.01
2242 2320 1.200948 GCTGGGTGCAAACTCTCAATC 59.799 52.381 0.00 0.00 42.31 2.67
2243 2321 1.251251 GCTGGGTGCAAACTCTCAAT 58.749 50.000 0.00 0.00 42.31 2.57
2244 2322 0.823356 GGCTGGGTGCAAACTCTCAA 60.823 55.000 0.00 0.00 45.15 3.02
2245 2323 1.228245 GGCTGGGTGCAAACTCTCA 60.228 57.895 0.00 0.00 45.15 3.27
2246 2324 1.973812 GGGCTGGGTGCAAACTCTC 60.974 63.158 0.00 0.00 45.15 3.20
2247 2325 2.116125 GGGCTGGGTGCAAACTCT 59.884 61.111 0.00 0.00 45.15 3.24
2248 2326 2.203480 TGGGCTGGGTGCAAACTC 60.203 61.111 0.00 0.00 45.15 3.01
2249 2327 2.521708 GTGGGCTGGGTGCAAACT 60.522 61.111 0.00 0.00 45.15 2.66
2250 2328 3.615709 GGTGGGCTGGGTGCAAAC 61.616 66.667 0.00 0.00 45.15 2.93
2251 2329 3.808218 GAGGTGGGCTGGGTGCAAA 62.808 63.158 0.00 0.00 45.15 3.68
2252 2330 4.284550 GAGGTGGGCTGGGTGCAA 62.285 66.667 0.00 0.00 45.15 4.08
2255 2333 2.285368 TAGGAGGTGGGCTGGGTG 60.285 66.667 0.00 0.00 0.00 4.61
2256 2334 2.285442 GTAGGAGGTGGGCTGGGT 60.285 66.667 0.00 0.00 0.00 4.51
2257 2335 3.470888 CGTAGGAGGTGGGCTGGG 61.471 72.222 0.00 0.00 0.00 4.45
2270 2348 2.543641 GGTTGGATTTACCGTCCGTAG 58.456 52.381 0.00 0.00 42.61 3.51
2271 2349 1.206849 GGGTTGGATTTACCGTCCGTA 59.793 52.381 0.00 0.00 42.61 4.02
2272 2350 0.036105 GGGTTGGATTTACCGTCCGT 60.036 55.000 0.00 0.00 42.61 4.69
2273 2351 0.036199 TGGGTTGGATTTACCGTCCG 60.036 55.000 0.00 0.00 42.61 4.79
2274 2352 2.203470 TTGGGTTGGATTTACCGTCC 57.797 50.000 0.00 0.00 42.61 4.79
2275 2353 2.885894 TGTTTGGGTTGGATTTACCGTC 59.114 45.455 0.00 0.00 42.61 4.79
2276 2354 2.888414 CTGTTTGGGTTGGATTTACCGT 59.112 45.455 0.00 0.00 42.61 4.83
2277 2355 2.888414 ACTGTTTGGGTTGGATTTACCG 59.112 45.455 0.00 0.00 42.61 4.02
2278 2356 3.006430 CCACTGTTTGGGTTGGATTTACC 59.994 47.826 0.00 0.00 42.54 2.85
2279 2357 4.251543 CCACTGTTTGGGTTGGATTTAC 57.748 45.455 0.00 0.00 42.54 2.01
2290 2368 7.414098 CGAAATACTTTCTATCCCACTGTTTGG 60.414 40.741 0.00 0.00 40.22 3.28
2291 2369 7.414098 CCGAAATACTTTCTATCCCACTGTTTG 60.414 40.741 0.00 0.00 37.52 2.93
2292 2370 6.598064 CCGAAATACTTTCTATCCCACTGTTT 59.402 38.462 0.00 0.00 37.52 2.83
2293 2371 6.113411 CCGAAATACTTTCTATCCCACTGTT 58.887 40.000 0.00 0.00 37.52 3.16
2294 2372 5.189145 ACCGAAATACTTTCTATCCCACTGT 59.811 40.000 0.00 0.00 37.52 3.55
2295 2373 5.523916 CACCGAAATACTTTCTATCCCACTG 59.476 44.000 0.00 0.00 37.52 3.66
2296 2374 5.189145 ACACCGAAATACTTTCTATCCCACT 59.811 40.000 0.00 0.00 37.52 4.00
2297 2375 5.425630 ACACCGAAATACTTTCTATCCCAC 58.574 41.667 0.00 0.00 37.52 4.61
2298 2376 5.687166 ACACCGAAATACTTTCTATCCCA 57.313 39.130 0.00 0.00 37.52 4.37
2299 2377 6.997239 AAACACCGAAATACTTTCTATCCC 57.003 37.500 0.00 0.00 37.52 3.85
2300 2378 8.713737 AGTAAACACCGAAATACTTTCTATCC 57.286 34.615 0.00 0.00 37.52 2.59
2337 2415 7.539712 ACGAGTCGATGAAATTACATGAATT 57.460 32.000 21.50 0.00 39.56 2.17
2338 2416 7.277760 TCAACGAGTCGATGAAATTACATGAAT 59.722 33.333 21.44 0.00 35.87 2.57
2339 2417 6.588373 TCAACGAGTCGATGAAATTACATGAA 59.412 34.615 21.44 0.00 35.87 2.57
2340 2418 6.096695 TCAACGAGTCGATGAAATTACATGA 58.903 36.000 21.44 0.00 35.87 3.07
2341 2419 6.331170 TCAACGAGTCGATGAAATTACATG 57.669 37.500 21.44 0.00 35.87 3.21
2342 2420 6.961359 TTCAACGAGTCGATGAAATTACAT 57.039 33.333 29.02 0.00 43.37 2.29
2349 2427 3.972403 TCACTTTCAACGAGTCGATGAA 58.028 40.909 27.92 27.92 44.29 2.57
2350 2428 3.636282 TCACTTTCAACGAGTCGATGA 57.364 42.857 20.08 20.08 36.92 2.92
2351 2429 4.708868 TTTCACTTTCAACGAGTCGATG 57.291 40.909 21.50 18.45 0.00 3.84
2352 2430 5.465390 TGATTTTCACTTTCAACGAGTCGAT 59.535 36.000 21.50 3.95 0.00 3.59
2353 2431 4.806775 TGATTTTCACTTTCAACGAGTCGA 59.193 37.500 21.50 0.00 0.00 4.20
2354 2432 4.898488 GTGATTTTCACTTTCAACGAGTCG 59.102 41.667 11.85 11.85 43.73 4.18
2427 2505 5.047235 GTCTAATGTTACCATCCGCCTAGAT 60.047 44.000 0.00 0.00 0.00 1.98
2431 2509 2.769663 TGTCTAATGTTACCATCCGCCT 59.230 45.455 0.00 0.00 0.00 5.52
2435 2513 5.123936 GTCCCTTGTCTAATGTTACCATCC 58.876 45.833 0.00 0.00 0.00 3.51
2446 2525 4.345859 AAACATCGTGTCCCTTGTCTAA 57.654 40.909 0.00 0.00 0.00 2.10
2447 2526 4.345859 AAAACATCGTGTCCCTTGTCTA 57.654 40.909 0.00 0.00 0.00 2.59
2450 2529 3.566742 GGTAAAAACATCGTGTCCCTTGT 59.433 43.478 0.00 0.00 0.00 3.16
2453 2532 2.106857 TGGGTAAAAACATCGTGTCCCT 59.893 45.455 10.79 0.00 32.37 4.20
2456 2535 3.143728 ACCTGGGTAAAAACATCGTGTC 58.856 45.455 0.00 0.00 0.00 3.67
2489 2568 3.067684 ACAGGGGTTTTACCTCAATCG 57.932 47.619 0.00 0.00 42.77 3.34
2492 2571 3.955524 TGAACAGGGGTTTTACCTCAA 57.044 42.857 0.00 0.00 42.77 3.02
2493 2572 3.460340 TCTTGAACAGGGGTTTTACCTCA 59.540 43.478 0.00 0.00 42.77 3.86
2553 2632 1.742761 TTCGGTGACCCTACGAGTAG 58.257 55.000 0.00 3.39 37.95 2.57
2559 2638 1.411041 AGGCTATTCGGTGACCCTAC 58.589 55.000 0.00 0.00 0.00 3.18
2572 2651 7.926555 CGGATGATTTATCGGTTTATAGGCTAT 59.073 37.037 12.41 12.41 36.62 2.97
2594 2673 6.432783 TCGGCCATTTAATCAATTAATCGGAT 59.567 34.615 2.24 0.00 32.78 4.18
2628 2707 2.176798 AGGGGATTAATTGGCCAATCGA 59.823 45.455 30.74 21.51 32.92 3.59
2634 2713 3.487372 GTGAGTAGGGGATTAATTGGCC 58.513 50.000 0.00 0.00 0.00 5.36
2638 2717 3.138468 GGCTGGTGAGTAGGGGATTAATT 59.862 47.826 0.00 0.00 0.00 1.40
2656 2735 2.103042 GTAGCTGCTCGGTTGGCTG 61.103 63.158 4.91 0.00 36.40 4.85
2855 2945 1.757699 CTGTGTAACCCTAGCCCTCTC 59.242 57.143 0.00 0.00 34.36 3.20
2862 2952 2.444421 ACCGACTCTGTGTAACCCTAG 58.556 52.381 0.00 0.00 34.36 3.02
2875 2965 1.829222 TCCTCCCATTGTAACCGACTC 59.171 52.381 0.00 0.00 0.00 3.36
2876 2966 1.831736 CTCCTCCCATTGTAACCGACT 59.168 52.381 0.00 0.00 0.00 4.18
2888 2978 3.333980 ACGGATATGTAGATCTCCTCCCA 59.666 47.826 0.00 0.00 0.00 4.37
2891 2981 5.049954 GCGATACGGATATGTAGATCTCCTC 60.050 48.000 0.00 0.00 0.00 3.71
2899 2989 3.119459 AGCTTGGCGATACGGATATGTAG 60.119 47.826 0.00 0.00 0.00 2.74
2901 2991 1.618837 AGCTTGGCGATACGGATATGT 59.381 47.619 0.00 0.00 0.00 2.29
2907 2997 2.709475 GCAAGCTTGGCGATACGG 59.291 61.111 27.10 0.00 0.00 4.02
2917 3007 0.465460 TTGACGTGGAAGGCAAGCTT 60.465 50.000 0.00 0.00 0.00 3.74
2926 3016 1.202722 GGGACTTTCCTTGACGTGGAA 60.203 52.381 0.00 0.00 41.33 3.53
2933 3023 1.358152 ACGGATGGGACTTTCCTTGA 58.642 50.000 0.00 0.00 36.57 3.02
2934 3024 2.027561 TGTACGGATGGGACTTTCCTTG 60.028 50.000 0.00 0.00 36.57 3.61
2938 3028 1.636988 CGTGTACGGATGGGACTTTC 58.363 55.000 0.00 0.00 35.37 2.62
2952 3042 1.608055 TGAAGACTTCGTCCCGTGTA 58.392 50.000 10.56 0.00 32.18 2.90
2956 3046 2.656560 AGATTGAAGACTTCGTCCCG 57.343 50.000 10.56 0.00 32.18 5.14
2958 3048 6.334202 AGATACAAGATTGAAGACTTCGTCC 58.666 40.000 10.56 2.18 32.18 4.79
2985 3075 0.687354 CCGGATGTCTGGATTAGGGG 59.313 60.000 0.00 0.00 45.36 4.79
2986 3076 0.035458 GCCGGATGTCTGGATTAGGG 59.965 60.000 5.05 0.00 45.36 3.53
2987 3077 0.035458 GGCCGGATGTCTGGATTAGG 59.965 60.000 5.05 0.00 45.36 2.69
2988 3078 0.758734 TGGCCGGATGTCTGGATTAG 59.241 55.000 5.05 0.00 45.36 1.73
2990 3080 0.331278 TTTGGCCGGATGTCTGGATT 59.669 50.000 5.05 0.00 45.36 3.01
2991 3081 0.107017 CTTTGGCCGGATGTCTGGAT 60.107 55.000 5.05 0.00 45.36 3.41
2992 3082 1.299648 CTTTGGCCGGATGTCTGGA 59.700 57.895 5.05 0.00 45.36 3.86
2993 3083 1.750399 CCTTTGGCCGGATGTCTGG 60.750 63.158 5.05 3.41 45.30 3.86
2997 3087 0.916086 TATGACCTTTGGCCGGATGT 59.084 50.000 5.05 0.00 0.00 3.06
2999 3089 1.141053 GACTATGACCTTTGGCCGGAT 59.859 52.381 5.05 0.00 0.00 4.18
3000 3090 0.539986 GACTATGACCTTTGGCCGGA 59.460 55.000 5.05 0.00 0.00 5.14
3001 3091 0.463833 GGACTATGACCTTTGGCCGG 60.464 60.000 0.00 0.00 0.00 6.13
3002 3092 0.810031 CGGACTATGACCTTTGGCCG 60.810 60.000 0.00 0.00 0.00 6.13
3003 3093 0.463833 CCGGACTATGACCTTTGGCC 60.464 60.000 0.00 0.00 0.00 5.36
3004 3094 1.095807 GCCGGACTATGACCTTTGGC 61.096 60.000 5.05 0.00 0.00 4.52
3009 3099 1.122019 GGATGGCCGGACTATGACCT 61.122 60.000 9.82 0.00 0.00 3.85
3012 3102 0.105709 TCTGGATGGCCGGACTATGA 60.106 55.000 9.82 0.00 44.72 2.15
3013 3103 2.440946 TCTGGATGGCCGGACTATG 58.559 57.895 9.82 0.00 44.72 2.23
3024 3114 1.421646 GGATTAGGGGGTGTCTGGATG 59.578 57.143 0.00 0.00 0.00 3.51
3025 3115 1.821088 GGATTAGGGGGTGTCTGGAT 58.179 55.000 0.00 0.00 0.00 3.41
3029 3119 0.043637 TTCCGGATTAGGGGGTGTCT 59.956 55.000 4.15 0.00 0.00 3.41
3030 3120 0.179702 GTTCCGGATTAGGGGGTGTC 59.820 60.000 4.15 0.00 0.00 3.67
3032 3122 0.468648 GAGTTCCGGATTAGGGGGTG 59.531 60.000 4.15 0.00 0.00 4.61
3045 3135 1.338890 GGGGCTACTGAGGGAGTTCC 61.339 65.000 0.00 0.00 35.96 3.62
3047 3137 1.307084 GGGGGCTACTGAGGGAGTT 60.307 63.158 0.00 0.00 35.96 3.01
3055 3145 2.584608 CTGGTTCGGGGGCTACTG 59.415 66.667 0.00 0.00 0.00 2.74
3065 3155 0.443869 CGTCATTGAAGCCTGGTTCG 59.556 55.000 4.80 0.00 0.00 3.95
3098 3188 2.523015 CAATGCCGAAGACAAATCTGC 58.477 47.619 0.00 0.00 34.48 4.26
3102 3192 1.203052 CCTGCAATGCCGAAGACAAAT 59.797 47.619 1.53 0.00 0.00 2.32
3103 3193 0.597568 CCTGCAATGCCGAAGACAAA 59.402 50.000 1.53 0.00 0.00 2.83
3113 3203 2.548127 GAAGAACCCGCCTGCAATGC 62.548 60.000 0.00 0.00 0.00 3.56
3121 3211 1.472878 GAATTTGGAGAAGAACCCGCC 59.527 52.381 0.00 0.00 0.00 6.13
3123 3213 2.790433 TGGAATTTGGAGAAGAACCCG 58.210 47.619 0.00 0.00 0.00 5.28


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.