Multiple sequence alignment - TraesCS7B01G304500

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G304500 chr7B 100.000 3486 0 0 1 3486 545976275 545972790 0.000000e+00 6438.0
1 TraesCS7B01G304500 chr7B 98.102 2740 27 9 772 3486 544982000 544984739 0.000000e+00 4748.0
2 TraesCS7B01G304500 chr7B 97.852 1769 32 6 727 2492 544880877 544882642 0.000000e+00 3051.0
3 TraesCS7B01G304500 chr7D 95.746 1763 53 7 727 2486 513311688 513313431 0.000000e+00 2820.0
4 TraesCS7B01G304500 chr7D 93.586 1715 62 17 772 2478 514092144 514093818 0.000000e+00 2514.0
5 TraesCS7B01G304500 chr7D 95.592 862 19 3 772 1632 515238205 515237362 0.000000e+00 1363.0
6 TraesCS7B01G304500 chr7D 95.360 862 21 3 772 1632 515221999 515221156 0.000000e+00 1352.0
7 TraesCS7B01G304500 chr7D 96.144 752 29 0 1727 2478 515236979 515236228 0.000000e+00 1229.0
8 TraesCS7B01G304500 chr7D 95.878 752 31 0 1727 2478 515220773 515220022 0.000000e+00 1218.0
9 TraesCS7B01G304500 chr7A 93.894 1736 85 11 746 2476 588740686 588738967 0.000000e+00 2599.0
10 TraesCS7B01G304500 chr7A 93.508 1756 89 19 738 2491 586693951 586692219 0.000000e+00 2588.0
11 TraesCS7B01G304500 chr7A 93.262 1499 56 22 984 2476 587518481 587519940 0.000000e+00 2167.0
12 TraesCS7B01G304500 chr7A 94.521 438 24 0 328 765 588906692 588906255 0.000000e+00 676.0
13 TraesCS7B01G304500 chr7A 89.490 314 29 3 1 313 588946920 588946610 9.070000e-106 394.0
14 TraesCS7B01G304500 chr7A 91.822 269 18 4 728 994 588750806 588750540 4.250000e-99 372.0
15 TraesCS7B01G304500 chr7A 93.478 46 3 0 2502 2547 586692165 586692120 6.240000e-08 69.4
16 TraesCS7B01G304500 chr5B 73.817 634 141 19 46 669 473758691 473758073 9.730000e-56 228.0
17 TraesCS7B01G304500 chr2B 73.284 670 147 24 14 669 182136892 182136241 2.110000e-52 217.0
18 TraesCS7B01G304500 chr2B 77.949 195 33 2 3024 3209 74810099 74809906 2.840000e-21 113.0
19 TraesCS7B01G304500 chr3B 72.956 636 142 25 46 669 804378158 804378775 9.870000e-46 195.0
20 TraesCS7B01G304500 chr3D 81.643 207 25 5 3033 3229 124569245 124569042 3.600000e-35 159.0
21 TraesCS7B01G304500 chr3D 81.143 175 33 0 184 358 611192266 611192440 1.300000e-29 141.0
22 TraesCS7B01G304500 chr3A 80.000 185 32 4 3062 3246 13332494 13332315 7.850000e-27 132.0
23 TraesCS7B01G304500 chr3A 81.022 137 24 2 3094 3229 131918351 131918216 1.320000e-19 108.0
24 TraesCS7B01G304500 chr6D 87.234 94 8 4 3396 3486 331727222 331727130 1.710000e-18 104.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G304500 chr7B 545972790 545976275 3485 True 6438.0 6438 100.000 1 3486 1 chr7B.!!$R1 3485
1 TraesCS7B01G304500 chr7B 544982000 544984739 2739 False 4748.0 4748 98.102 772 3486 1 chr7B.!!$F2 2714
2 TraesCS7B01G304500 chr7B 544880877 544882642 1765 False 3051.0 3051 97.852 727 2492 1 chr7B.!!$F1 1765
3 TraesCS7B01G304500 chr7D 513311688 513313431 1743 False 2820.0 2820 95.746 727 2486 1 chr7D.!!$F1 1759
4 TraesCS7B01G304500 chr7D 514092144 514093818 1674 False 2514.0 2514 93.586 772 2478 1 chr7D.!!$F2 1706
5 TraesCS7B01G304500 chr7D 515236228 515238205 1977 True 1296.0 1363 95.868 772 2478 2 chr7D.!!$R2 1706
6 TraesCS7B01G304500 chr7D 515220022 515221999 1977 True 1285.0 1352 95.619 772 2478 2 chr7D.!!$R1 1706
7 TraesCS7B01G304500 chr7A 588738967 588740686 1719 True 2599.0 2599 93.894 746 2476 1 chr7A.!!$R1 1730
8 TraesCS7B01G304500 chr7A 587518481 587519940 1459 False 2167.0 2167 93.262 984 2476 1 chr7A.!!$F1 1492
9 TraesCS7B01G304500 chr7A 586692120 586693951 1831 True 1328.7 2588 93.493 738 2547 2 chr7A.!!$R5 1809
10 TraesCS7B01G304500 chr5B 473758073 473758691 618 True 228.0 228 73.817 46 669 1 chr5B.!!$R1 623
11 TraesCS7B01G304500 chr2B 182136241 182136892 651 True 217.0 217 73.284 14 669 1 chr2B.!!$R2 655

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
286 288 0.246635 CCAGGTTGTCCTAGACCACG 59.753 60.0 1.53 0.0 43.07 4.94 F
399 401 0.622136 AGATCAGCAATGCCACCTGA 59.378 50.0 0.00 0.0 39.65 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2416 2831 0.246360 CGTGGGTGCAGACAGTCATA 59.754 55.000 2.66 0.0 0.0 2.15 R
2907 3365 4.184629 CTGCTGTATTTGAGTAGACCACC 58.815 47.826 0.00 0.0 0.0 4.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 7.088272 ACCCATCGCTTTTGTTTTTAATAGTC 58.912 34.615 0.00 0.00 0.00 2.59
30 31 6.237201 CCATCGCTTTTGTTTTTAATAGTCGC 60.237 38.462 0.00 0.00 0.00 5.19
33 34 6.141053 TCGCTTTTGTTTTTAATAGTCGCAAC 59.859 34.615 0.00 0.00 0.00 4.17
74 76 9.892130 ATTTACAAAACCAATAACCTCAAACAA 57.108 25.926 0.00 0.00 0.00 2.83
79 81 9.054922 CAAAACCAATAACCTCAAACAAATCAT 57.945 29.630 0.00 0.00 0.00 2.45
98 100 3.888930 TCATTTTTCAGACCCACAAGGAC 59.111 43.478 0.00 0.00 39.89 3.85
99 101 2.358322 TTTTCAGACCCACAAGGACC 57.642 50.000 0.00 0.00 39.89 4.46
100 102 1.518367 TTTCAGACCCACAAGGACCT 58.482 50.000 0.00 0.00 39.89 3.85
101 103 2.409064 TTCAGACCCACAAGGACCTA 57.591 50.000 0.00 0.00 39.89 3.08
102 104 1.640917 TCAGACCCACAAGGACCTAC 58.359 55.000 0.00 0.00 39.89 3.18
103 105 1.132977 TCAGACCCACAAGGACCTACA 60.133 52.381 0.00 0.00 39.89 2.74
107 109 1.683441 CCACAAGGACCTACACCCC 59.317 63.158 0.00 0.00 36.89 4.95
128 130 0.602638 CAGCCGTGTTTACAGCAGGA 60.603 55.000 0.00 0.00 32.57 3.86
131 133 1.069227 GCCGTGTTTACAGCAGGAAAG 60.069 52.381 0.00 0.00 30.50 2.62
132 134 1.069227 CCGTGTTTACAGCAGGAAAGC 60.069 52.381 0.00 0.00 0.00 3.51
141 143 1.404391 CAGCAGGAAAGCTATGCCAAG 59.596 52.381 8.90 0.34 44.54 3.61
142 144 1.005215 AGCAGGAAAGCTATGCCAAGT 59.995 47.619 8.90 0.00 44.50 3.16
143 145 1.133790 GCAGGAAAGCTATGCCAAGTG 59.866 52.381 0.00 0.00 33.81 3.16
146 148 3.084786 AGGAAAGCTATGCCAAGTGAAC 58.915 45.455 0.00 0.00 0.00 3.18
147 149 3.084786 GGAAAGCTATGCCAAGTGAACT 58.915 45.455 0.00 0.00 0.00 3.01
151 153 3.539604 AGCTATGCCAAGTGAACTCATC 58.460 45.455 0.00 0.00 0.00 2.92
155 157 1.271543 TGCCAAGTGAACTCATCCCTG 60.272 52.381 0.00 0.00 0.00 4.45
165 167 3.567478 ACTCATCCCTGCCAGAAATAC 57.433 47.619 0.00 0.00 0.00 1.89
167 169 3.135530 ACTCATCCCTGCCAGAAATACTC 59.864 47.826 0.00 0.00 0.00 2.59
168 170 2.439507 TCATCCCTGCCAGAAATACTCC 59.560 50.000 0.00 0.00 0.00 3.85
179 181 2.761208 AGAAATACTCCTGAGGACGTGG 59.239 50.000 0.00 0.00 0.00 4.94
180 182 1.486211 AATACTCCTGAGGACGTGGG 58.514 55.000 0.00 0.00 0.00 4.61
181 183 0.335361 ATACTCCTGAGGACGTGGGT 59.665 55.000 0.00 0.00 0.00 4.51
182 184 0.994247 TACTCCTGAGGACGTGGGTA 59.006 55.000 0.00 0.00 0.00 3.69
183 185 0.335361 ACTCCTGAGGACGTGGGTAT 59.665 55.000 0.00 0.00 0.00 2.73
184 186 1.033574 CTCCTGAGGACGTGGGTATC 58.966 60.000 0.00 0.00 0.00 2.24
185 187 0.629596 TCCTGAGGACGTGGGTATCT 59.370 55.000 0.00 0.00 0.00 1.98
186 188 1.848388 TCCTGAGGACGTGGGTATCTA 59.152 52.381 0.00 0.00 0.00 1.98
187 189 2.445905 TCCTGAGGACGTGGGTATCTAT 59.554 50.000 0.00 0.00 0.00 1.98
188 190 3.654321 TCCTGAGGACGTGGGTATCTATA 59.346 47.826 0.00 0.00 0.00 1.31
189 191 4.291513 TCCTGAGGACGTGGGTATCTATAT 59.708 45.833 0.00 0.00 0.00 0.86
190 192 5.017490 CCTGAGGACGTGGGTATCTATATT 58.983 45.833 0.00 0.00 0.00 1.28
191 193 5.125739 CCTGAGGACGTGGGTATCTATATTC 59.874 48.000 0.00 0.00 0.00 1.75
192 194 5.888901 TGAGGACGTGGGTATCTATATTCT 58.111 41.667 0.00 0.00 0.00 2.40
193 195 5.944599 TGAGGACGTGGGTATCTATATTCTC 59.055 44.000 0.00 0.00 0.00 2.87
194 196 6.142259 AGGACGTGGGTATCTATATTCTCT 57.858 41.667 0.00 0.00 0.00 3.10
195 197 7.037802 TGAGGACGTGGGTATCTATATTCTCTA 60.038 40.741 0.00 0.00 0.00 2.43
196 198 7.874252 AGGACGTGGGTATCTATATTCTCTAT 58.126 38.462 0.00 0.00 0.00 1.98
197 199 8.337739 AGGACGTGGGTATCTATATTCTCTATT 58.662 37.037 0.00 0.00 0.00 1.73
198 200 8.968969 GGACGTGGGTATCTATATTCTCTATTT 58.031 37.037 0.00 0.00 0.00 1.40
201 203 9.587772 CGTGGGTATCTATATTCTCTATTTTGG 57.412 37.037 0.00 0.00 0.00 3.28
224 226 7.139896 GGTTTCAAACAAACCAACAAAATCT 57.860 32.000 10.74 0.00 46.74 2.40
225 227 8.257830 GGTTTCAAACAAACCAACAAAATCTA 57.742 30.769 10.74 0.00 46.74 1.98
226 228 8.722394 GGTTTCAAACAAACCAACAAAATCTAA 58.278 29.630 10.74 0.00 46.74 2.10
230 232 9.658799 TCAAACAAACCAACAAAATCTAAATGA 57.341 25.926 0.00 0.00 0.00 2.57
234 236 9.612066 ACAAACCAACAAAATCTAAATGATTGT 57.388 25.926 0.00 0.00 43.99 2.71
237 239 9.612066 AACCAACAAAATCTAAATGATTGTTGT 57.388 25.926 21.24 13.59 44.42 3.32
238 240 9.612066 ACCAACAAAATCTAAATGATTGTTGTT 57.388 25.926 21.24 16.82 44.42 2.83
262 264 4.965200 GGAAATCTCCTAGGCACTGTAT 57.035 45.455 2.96 0.00 38.88 2.29
263 265 5.297569 GGAAATCTCCTAGGCACTGTATT 57.702 43.478 2.96 0.00 38.88 1.89
264 266 5.685728 GGAAATCTCCTAGGCACTGTATTT 58.314 41.667 2.96 3.56 38.88 1.40
265 267 6.122964 GGAAATCTCCTAGGCACTGTATTTT 58.877 40.000 2.96 0.00 38.88 1.82
266 268 7.280356 GGAAATCTCCTAGGCACTGTATTTTA 58.720 38.462 2.96 0.00 38.88 1.52
267 269 7.226918 GGAAATCTCCTAGGCACTGTATTTTAC 59.773 40.741 2.96 0.00 38.88 2.01
268 270 5.609533 TCTCCTAGGCACTGTATTTTACC 57.390 43.478 2.96 0.00 41.52 2.85
269 271 5.027460 TCTCCTAGGCACTGTATTTTACCA 58.973 41.667 2.96 0.00 41.52 3.25
270 272 5.128827 TCTCCTAGGCACTGTATTTTACCAG 59.871 44.000 2.96 0.00 41.52 4.00
271 273 4.163458 TCCTAGGCACTGTATTTTACCAGG 59.837 45.833 2.96 0.00 41.52 4.45
272 274 4.080526 CCTAGGCACTGTATTTTACCAGGT 60.081 45.833 0.00 0.00 41.52 4.00
273 275 4.382386 AGGCACTGTATTTTACCAGGTT 57.618 40.909 0.00 0.00 37.18 3.50
274 276 4.079253 AGGCACTGTATTTTACCAGGTTG 58.921 43.478 0.00 0.00 37.18 3.77
275 277 3.824443 GGCACTGTATTTTACCAGGTTGT 59.176 43.478 0.00 0.00 0.00 3.32
276 278 4.082949 GGCACTGTATTTTACCAGGTTGTC 60.083 45.833 0.00 0.00 0.00 3.18
277 279 4.082949 GCACTGTATTTTACCAGGTTGTCC 60.083 45.833 0.00 0.00 0.00 4.02
278 280 5.313712 CACTGTATTTTACCAGGTTGTCCT 58.686 41.667 0.00 0.00 46.37 3.85
279 281 6.469410 CACTGTATTTTACCAGGTTGTCCTA 58.531 40.000 0.00 0.00 43.07 2.94
280 282 6.594159 CACTGTATTTTACCAGGTTGTCCTAG 59.406 42.308 0.00 0.00 43.07 3.02
281 283 6.499350 ACTGTATTTTACCAGGTTGTCCTAGA 59.501 38.462 0.00 0.00 43.07 2.43
282 284 6.704310 TGTATTTTACCAGGTTGTCCTAGAC 58.296 40.000 0.00 0.00 43.07 2.59
283 285 4.628963 TTTTACCAGGTTGTCCTAGACC 57.371 45.455 0.00 0.00 43.07 3.85
284 286 3.263369 TTACCAGGTTGTCCTAGACCA 57.737 47.619 0.00 0.00 43.07 4.02
285 287 1.349067 ACCAGGTTGTCCTAGACCAC 58.651 55.000 1.53 0.00 43.07 4.16
286 288 0.246635 CCAGGTTGTCCTAGACCACG 59.753 60.000 1.53 0.00 43.07 4.94
287 289 0.966920 CAGGTTGTCCTAGACCACGT 59.033 55.000 1.53 0.00 43.07 4.49
288 290 2.165167 CAGGTTGTCCTAGACCACGTA 58.835 52.381 1.53 0.00 43.07 3.57
289 291 2.758979 CAGGTTGTCCTAGACCACGTAT 59.241 50.000 1.53 0.00 43.07 3.06
290 292 3.949754 CAGGTTGTCCTAGACCACGTATA 59.050 47.826 1.53 0.00 43.07 1.47
291 293 4.583489 CAGGTTGTCCTAGACCACGTATAT 59.417 45.833 1.53 0.00 43.07 0.86
292 294 5.068723 CAGGTTGTCCTAGACCACGTATATT 59.931 44.000 1.53 0.00 43.07 1.28
293 295 5.301298 AGGTTGTCCTAGACCACGTATATTC 59.699 44.000 1.53 0.00 43.12 1.75
294 296 5.508657 GGTTGTCCTAGACCACGTATATTCC 60.509 48.000 0.00 0.00 35.95 3.01
295 297 4.795469 TGTCCTAGACCACGTATATTCCA 58.205 43.478 0.00 0.00 0.00 3.53
296 298 4.825634 TGTCCTAGACCACGTATATTCCAG 59.174 45.833 0.00 0.00 0.00 3.86
297 299 5.068636 GTCCTAGACCACGTATATTCCAGA 58.931 45.833 0.00 0.00 0.00 3.86
298 300 5.533903 GTCCTAGACCACGTATATTCCAGAA 59.466 44.000 0.00 0.00 0.00 3.02
299 301 5.768662 TCCTAGACCACGTATATTCCAGAAG 59.231 44.000 0.00 0.00 0.00 2.85
300 302 4.939052 AGACCACGTATATTCCAGAAGG 57.061 45.455 0.00 0.00 0.00 3.46
301 303 3.069729 AGACCACGTATATTCCAGAAGGC 59.930 47.826 0.00 0.00 33.74 4.35
302 304 3.039011 ACCACGTATATTCCAGAAGGCT 58.961 45.455 0.00 0.00 33.74 4.58
303 305 3.069729 ACCACGTATATTCCAGAAGGCTC 59.930 47.826 0.00 0.00 33.74 4.70
304 306 3.555168 CCACGTATATTCCAGAAGGCTCC 60.555 52.174 0.00 0.00 33.74 4.70
305 307 3.322254 CACGTATATTCCAGAAGGCTCCT 59.678 47.826 0.00 0.00 33.74 3.69
306 308 4.523173 CACGTATATTCCAGAAGGCTCCTA 59.477 45.833 0.00 0.00 33.74 2.94
307 309 5.186021 CACGTATATTCCAGAAGGCTCCTAT 59.814 44.000 0.00 0.00 33.74 2.57
308 310 5.419471 ACGTATATTCCAGAAGGCTCCTATC 59.581 44.000 0.00 0.00 33.74 2.08
309 311 5.419155 CGTATATTCCAGAAGGCTCCTATCA 59.581 44.000 0.00 0.00 33.74 2.15
310 312 6.097554 CGTATATTCCAGAAGGCTCCTATCAT 59.902 42.308 0.00 0.00 33.74 2.45
311 313 6.966637 ATATTCCAGAAGGCTCCTATCATT 57.033 37.500 0.00 0.00 33.74 2.57
312 314 5.659849 ATTCCAGAAGGCTCCTATCATTT 57.340 39.130 0.00 0.00 33.74 2.32
313 315 6.770286 ATTCCAGAAGGCTCCTATCATTTA 57.230 37.500 0.00 0.00 33.74 1.40
314 316 6.575244 TTCCAGAAGGCTCCTATCATTTAA 57.425 37.500 0.00 0.00 33.74 1.52
315 317 5.930135 TCCAGAAGGCTCCTATCATTTAAC 58.070 41.667 0.00 0.00 33.74 2.01
316 318 5.667626 TCCAGAAGGCTCCTATCATTTAACT 59.332 40.000 0.00 0.00 33.74 2.24
317 319 6.158695 TCCAGAAGGCTCCTATCATTTAACTT 59.841 38.462 0.00 0.00 33.74 2.66
318 320 6.830838 CCAGAAGGCTCCTATCATTTAACTTT 59.169 38.462 0.00 0.00 0.00 2.66
319 321 7.993183 CCAGAAGGCTCCTATCATTTAACTTTA 59.007 37.037 0.00 0.00 0.00 1.85
320 322 9.396022 CAGAAGGCTCCTATCATTTAACTTTAA 57.604 33.333 0.00 0.00 0.00 1.52
321 323 9.975218 AGAAGGCTCCTATCATTTAACTTTAAA 57.025 29.630 0.00 0.00 37.08 1.52
324 326 9.190317 AGGCTCCTATCATTTAACTTTAAAAGG 57.810 33.333 0.00 1.99 36.35 3.11
325 327 9.185680 GGCTCCTATCATTTAACTTTAAAAGGA 57.814 33.333 10.28 10.28 35.31 3.36
335 337 9.914131 ATTTAACTTTAAAAGGATGAGACAAGC 57.086 29.630 0.00 0.00 36.35 4.01
336 338 5.966742 ACTTTAAAAGGATGAGACAAGCC 57.033 39.130 0.00 0.00 0.00 4.35
337 339 5.385198 ACTTTAAAAGGATGAGACAAGCCA 58.615 37.500 0.00 0.00 0.00 4.75
338 340 5.833131 ACTTTAAAAGGATGAGACAAGCCAA 59.167 36.000 0.00 0.00 0.00 4.52
339 341 6.323739 ACTTTAAAAGGATGAGACAAGCCAAA 59.676 34.615 0.00 0.00 0.00 3.28
340 342 6.723298 TTAAAAGGATGAGACAAGCCAAAA 57.277 33.333 0.00 0.00 0.00 2.44
341 343 4.861102 AAAGGATGAGACAAGCCAAAAG 57.139 40.909 0.00 0.00 0.00 2.27
342 344 2.800250 AGGATGAGACAAGCCAAAAGG 58.200 47.619 0.00 0.00 0.00 3.11
343 345 1.203287 GGATGAGACAAGCCAAAAGGC 59.797 52.381 0.00 0.00 0.00 4.35
354 356 4.105754 AGCCAAAAGGCTTCTTCTTAGT 57.894 40.909 0.00 0.00 43.30 2.24
355 357 5.242795 AGCCAAAAGGCTTCTTCTTAGTA 57.757 39.130 0.00 0.00 43.30 1.82
356 358 5.821097 AGCCAAAAGGCTTCTTCTTAGTAT 58.179 37.500 0.00 0.00 43.30 2.12
357 359 6.249192 AGCCAAAAGGCTTCTTCTTAGTATT 58.751 36.000 0.00 0.00 43.30 1.89
358 360 6.375736 AGCCAAAAGGCTTCTTCTTAGTATTC 59.624 38.462 0.00 0.00 43.30 1.75
359 361 6.151144 GCCAAAAGGCTTCTTCTTAGTATTCA 59.849 38.462 0.00 0.00 0.00 2.57
360 362 7.627300 GCCAAAAGGCTTCTTCTTAGTATTCAG 60.627 40.741 0.00 0.00 0.00 3.02
361 363 7.607991 CCAAAAGGCTTCTTCTTAGTATTCAGA 59.392 37.037 0.00 0.00 0.00 3.27
362 364 9.003658 CAAAAGGCTTCTTCTTAGTATTCAGAA 57.996 33.333 0.00 0.00 0.00 3.02
363 365 9.746457 AAAAGGCTTCTTCTTAGTATTCAGAAT 57.254 29.630 0.00 0.20 0.00 2.40
364 366 9.746457 AAAGGCTTCTTCTTAGTATTCAGAATT 57.254 29.630 0.00 0.00 0.00 2.17
365 367 8.729805 AGGCTTCTTCTTAGTATTCAGAATTG 57.270 34.615 0.00 0.00 0.00 2.32
366 368 7.772757 AGGCTTCTTCTTAGTATTCAGAATTGG 59.227 37.037 0.00 0.00 0.00 3.16
367 369 7.012799 GGCTTCTTCTTAGTATTCAGAATTGGG 59.987 40.741 0.00 0.00 0.00 4.12
368 370 7.554476 GCTTCTTCTTAGTATTCAGAATTGGGT 59.446 37.037 0.00 0.00 0.00 4.51
369 371 9.454859 CTTCTTCTTAGTATTCAGAATTGGGTT 57.545 33.333 0.00 0.00 0.00 4.11
370 372 9.807921 TTCTTCTTAGTATTCAGAATTGGGTTT 57.192 29.630 0.00 0.00 0.00 3.27
371 373 9.807921 TCTTCTTAGTATTCAGAATTGGGTTTT 57.192 29.630 0.00 0.00 0.00 2.43
373 375 8.575649 TCTTAGTATTCAGAATTGGGTTTTCC 57.424 34.615 0.00 0.00 39.75 3.13
374 376 8.167392 TCTTAGTATTCAGAATTGGGTTTTCCA 58.833 33.333 0.00 0.00 45.43 3.53
384 386 3.713826 TGGGTTTTCCACACCTAGATC 57.286 47.619 0.00 0.00 41.46 2.75
385 387 2.983192 TGGGTTTTCCACACCTAGATCA 59.017 45.455 0.00 0.00 41.46 2.92
386 388 3.009033 TGGGTTTTCCACACCTAGATCAG 59.991 47.826 0.00 0.00 41.46 2.90
387 389 3.010420 GGTTTTCCACACCTAGATCAGC 58.990 50.000 0.00 0.00 40.31 4.26
388 390 3.559171 GGTTTTCCACACCTAGATCAGCA 60.559 47.826 0.00 0.00 40.31 4.41
389 391 4.072131 GTTTTCCACACCTAGATCAGCAA 58.928 43.478 0.00 0.00 0.00 3.91
390 392 4.574674 TTTCCACACCTAGATCAGCAAT 57.425 40.909 0.00 0.00 0.00 3.56
391 393 3.548745 TCCACACCTAGATCAGCAATG 57.451 47.619 0.00 0.00 0.00 2.82
392 394 1.945394 CCACACCTAGATCAGCAATGC 59.055 52.381 0.00 0.00 0.00 3.56
393 395 1.945394 CACACCTAGATCAGCAATGCC 59.055 52.381 0.00 0.00 0.00 4.40
394 396 1.561076 ACACCTAGATCAGCAATGCCA 59.439 47.619 0.00 0.00 0.00 4.92
395 397 1.945394 CACCTAGATCAGCAATGCCAC 59.055 52.381 0.00 0.00 0.00 5.01
396 398 1.133976 ACCTAGATCAGCAATGCCACC 60.134 52.381 0.00 0.00 0.00 4.61
397 399 1.142465 CCTAGATCAGCAATGCCACCT 59.858 52.381 0.00 0.00 0.00 4.00
398 400 2.219458 CTAGATCAGCAATGCCACCTG 58.781 52.381 0.00 0.00 0.00 4.00
399 401 0.622136 AGATCAGCAATGCCACCTGA 59.378 50.000 0.00 0.00 39.65 3.86
400 402 1.214673 AGATCAGCAATGCCACCTGAT 59.785 47.619 7.31 7.31 46.01 2.90
401 403 1.688772 ATCAGCAATGCCACCTGATC 58.311 50.000 0.00 0.00 41.17 2.92
402 404 0.622136 TCAGCAATGCCACCTGATCT 59.378 50.000 0.00 0.00 31.16 2.75
403 405 1.839354 TCAGCAATGCCACCTGATCTA 59.161 47.619 0.00 0.00 31.16 1.98
404 406 1.945394 CAGCAATGCCACCTGATCTAC 59.055 52.381 0.00 0.00 0.00 2.59
405 407 1.842562 AGCAATGCCACCTGATCTACT 59.157 47.619 0.00 0.00 0.00 2.57
406 408 3.041211 AGCAATGCCACCTGATCTACTA 58.959 45.455 0.00 0.00 0.00 1.82
407 409 3.070734 AGCAATGCCACCTGATCTACTAG 59.929 47.826 0.00 0.00 0.00 2.57
408 410 3.805108 GCAATGCCACCTGATCTACTAGG 60.805 52.174 0.00 0.00 40.01 3.02
409 411 3.619900 ATGCCACCTGATCTACTAGGA 57.380 47.619 3.90 0.00 37.52 2.94
410 412 2.950781 TGCCACCTGATCTACTAGGAG 58.049 52.381 0.00 0.00 37.52 3.69
411 413 2.514160 TGCCACCTGATCTACTAGGAGA 59.486 50.000 7.25 7.25 37.52 3.71
412 414 3.052869 TGCCACCTGATCTACTAGGAGAA 60.053 47.826 9.23 0.00 37.52 2.87
413 415 3.961408 GCCACCTGATCTACTAGGAGAAA 59.039 47.826 9.23 0.00 37.52 2.52
414 416 4.038642 GCCACCTGATCTACTAGGAGAAAG 59.961 50.000 9.23 9.71 37.52 2.62
415 417 5.450453 CCACCTGATCTACTAGGAGAAAGA 58.550 45.833 9.23 0.00 37.52 2.52
416 418 5.894393 CCACCTGATCTACTAGGAGAAAGAA 59.106 44.000 9.23 0.00 37.52 2.52
417 419 6.183360 CCACCTGATCTACTAGGAGAAAGAAC 60.183 46.154 9.23 0.00 37.52 3.01
418 420 6.378564 CACCTGATCTACTAGGAGAAAGAACA 59.621 42.308 9.23 4.22 37.52 3.18
419 421 6.378848 ACCTGATCTACTAGGAGAAAGAACAC 59.621 42.308 9.23 0.00 37.52 3.32
420 422 6.183360 CCTGATCTACTAGGAGAAAGAACACC 60.183 46.154 9.23 0.00 36.11 4.16
421 423 6.253758 TGATCTACTAGGAGAAAGAACACCA 58.746 40.000 9.23 0.00 0.00 4.17
422 424 6.724441 TGATCTACTAGGAGAAAGAACACCAA 59.276 38.462 9.23 0.00 0.00 3.67
423 425 7.400339 TGATCTACTAGGAGAAAGAACACCAAT 59.600 37.037 9.23 0.00 0.00 3.16
424 426 7.171630 TCTACTAGGAGAAAGAACACCAATC 57.828 40.000 0.77 0.00 0.00 2.67
425 427 6.954684 TCTACTAGGAGAAAGAACACCAATCT 59.045 38.462 0.77 0.00 0.00 2.40
426 428 6.043854 ACTAGGAGAAAGAACACCAATCTC 57.956 41.667 0.00 0.00 36.62 2.75
427 429 5.782845 ACTAGGAGAAAGAACACCAATCTCT 59.217 40.000 0.00 0.00 37.33 3.10
428 430 4.904241 AGGAGAAAGAACACCAATCTCTG 58.096 43.478 0.00 0.00 37.33 3.35
429 431 4.349342 AGGAGAAAGAACACCAATCTCTGT 59.651 41.667 0.00 0.00 37.33 3.41
430 432 5.544176 AGGAGAAAGAACACCAATCTCTGTA 59.456 40.000 0.00 0.00 37.33 2.74
431 433 6.214412 AGGAGAAAGAACACCAATCTCTGTAT 59.786 38.462 0.00 0.00 37.33 2.29
432 434 6.314896 GGAGAAAGAACACCAATCTCTGTATG 59.685 42.308 0.00 0.00 37.33 2.39
433 435 6.773638 AGAAAGAACACCAATCTCTGTATGT 58.226 36.000 0.00 0.00 0.00 2.29
434 436 6.652481 AGAAAGAACACCAATCTCTGTATGTG 59.348 38.462 0.00 0.00 0.00 3.21
435 437 4.836825 AGAACACCAATCTCTGTATGTGG 58.163 43.478 0.00 0.00 35.39 4.17
436 438 3.634397 ACACCAATCTCTGTATGTGGG 57.366 47.619 0.00 0.00 33.43 4.61
437 439 2.239654 ACACCAATCTCTGTATGTGGGG 59.760 50.000 0.00 0.00 38.80 4.96
438 440 1.212935 ACCAATCTCTGTATGTGGGGC 59.787 52.381 0.00 0.00 33.43 5.80
439 441 1.212688 CCAATCTCTGTATGTGGGGCA 59.787 52.381 0.00 0.00 0.00 5.36
440 442 2.357050 CCAATCTCTGTATGTGGGGCAA 60.357 50.000 0.00 0.00 0.00 4.52
441 443 2.684881 CAATCTCTGTATGTGGGGCAAC 59.315 50.000 0.00 0.00 0.00 4.17
451 453 6.368805 TGTATGTGGGGCAACATCATTAATA 58.631 36.000 8.16 0.00 41.09 0.98
452 454 7.009550 TGTATGTGGGGCAACATCATTAATAT 58.990 34.615 8.16 0.00 41.09 1.28
458 460 6.274436 TGGGGCAACATCATTAATATCCTCTA 59.726 38.462 0.00 0.00 39.74 2.43
459 461 7.175104 GGGGCAACATCATTAATATCCTCTAA 58.825 38.462 0.00 0.00 39.74 2.10
460 462 7.669722 GGGGCAACATCATTAATATCCTCTAAA 59.330 37.037 0.00 0.00 39.74 1.85
461 463 9.247861 GGGCAACATCATTAATATCCTCTAAAT 57.752 33.333 0.00 0.00 39.74 1.40
475 477 6.500589 TCCTCTAAATCCAAACTATCAGGG 57.499 41.667 0.00 0.00 0.00 4.45
476 478 6.209774 TCCTCTAAATCCAAACTATCAGGGA 58.790 40.000 0.00 0.00 0.00 4.20
477 479 6.327626 TCCTCTAAATCCAAACTATCAGGGAG 59.672 42.308 0.00 0.00 31.96 4.30
478 480 6.327626 CCTCTAAATCCAAACTATCAGGGAGA 59.672 42.308 0.00 0.00 31.96 3.71
479 481 7.147479 CCTCTAAATCCAAACTATCAGGGAGAA 60.147 40.741 0.00 0.00 31.96 2.87
480 482 7.565680 TCTAAATCCAAACTATCAGGGAGAAC 58.434 38.462 0.00 0.00 31.96 3.01
481 483 5.779241 AATCCAAACTATCAGGGAGAACA 57.221 39.130 0.00 0.00 31.96 3.18
482 484 5.779241 ATCCAAACTATCAGGGAGAACAA 57.221 39.130 0.00 0.00 31.96 2.83
483 485 5.779241 TCCAAACTATCAGGGAGAACAAT 57.221 39.130 0.00 0.00 0.00 2.71
484 486 5.745227 TCCAAACTATCAGGGAGAACAATC 58.255 41.667 0.00 0.00 0.00 2.67
485 487 5.488919 TCCAAACTATCAGGGAGAACAATCT 59.511 40.000 0.00 0.00 39.10 2.40
501 503 8.443953 AGAACAATCTCAGGATTAACATAAGC 57.556 34.615 0.00 0.00 39.87 3.09
502 504 8.049117 AGAACAATCTCAGGATTAACATAAGCA 58.951 33.333 0.00 0.00 39.87 3.91
503 505 8.579850 AACAATCTCAGGATTAACATAAGCAA 57.420 30.769 0.00 0.00 39.87 3.91
504 506 8.579850 ACAATCTCAGGATTAACATAAGCAAA 57.420 30.769 0.00 0.00 39.87 3.68
505 507 8.462016 ACAATCTCAGGATTAACATAAGCAAAC 58.538 33.333 0.00 0.00 39.87 2.93
506 508 8.680903 CAATCTCAGGATTAACATAAGCAAACT 58.319 33.333 0.00 0.00 39.87 2.66
507 509 7.615582 TCTCAGGATTAACATAAGCAAACTG 57.384 36.000 0.00 0.00 0.00 3.16
508 510 7.394016 TCTCAGGATTAACATAAGCAAACTGA 58.606 34.615 0.00 0.00 0.00 3.41
509 511 7.882791 TCTCAGGATTAACATAAGCAAACTGAA 59.117 33.333 0.00 0.00 31.74 3.02
510 512 8.044060 TCAGGATTAACATAAGCAAACTGAAG 57.956 34.615 0.00 0.00 0.00 3.02
511 513 7.882791 TCAGGATTAACATAAGCAAACTGAAGA 59.117 33.333 0.00 0.00 0.00 2.87
512 514 7.965107 CAGGATTAACATAAGCAAACTGAAGAC 59.035 37.037 0.00 0.00 0.00 3.01
513 515 7.665559 AGGATTAACATAAGCAAACTGAAGACA 59.334 33.333 0.00 0.00 0.00 3.41
514 516 8.462016 GGATTAACATAAGCAAACTGAAGACAT 58.538 33.333 0.00 0.00 0.00 3.06
515 517 9.495754 GATTAACATAAGCAAACTGAAGACATC 57.504 33.333 0.00 0.00 0.00 3.06
516 518 8.621532 TTAACATAAGCAAACTGAAGACATCT 57.378 30.769 0.00 0.00 0.00 2.90
517 519 9.719355 TTAACATAAGCAAACTGAAGACATCTA 57.281 29.630 0.00 0.00 0.00 1.98
518 520 7.840342 ACATAAGCAAACTGAAGACATCTAG 57.160 36.000 0.00 0.00 0.00 2.43
519 521 6.314896 ACATAAGCAAACTGAAGACATCTAGC 59.685 38.462 0.00 0.00 0.00 3.42
520 522 4.550076 AGCAAACTGAAGACATCTAGCT 57.450 40.909 0.00 0.00 0.00 3.32
521 523 4.904241 AGCAAACTGAAGACATCTAGCTT 58.096 39.130 0.00 0.00 0.00 3.74
522 524 5.312079 AGCAAACTGAAGACATCTAGCTTT 58.688 37.500 0.00 0.00 0.00 3.51
523 525 5.411053 AGCAAACTGAAGACATCTAGCTTTC 59.589 40.000 0.00 0.00 0.00 2.62
524 526 5.411053 GCAAACTGAAGACATCTAGCTTTCT 59.589 40.000 0.00 0.00 0.00 2.52
525 527 6.402011 GCAAACTGAAGACATCTAGCTTTCTC 60.402 42.308 0.00 0.00 0.00 2.87
526 528 5.991933 ACTGAAGACATCTAGCTTTCTCA 57.008 39.130 0.00 0.00 0.00 3.27
527 529 6.543430 ACTGAAGACATCTAGCTTTCTCAT 57.457 37.500 0.00 0.00 0.00 2.90
528 530 6.572519 ACTGAAGACATCTAGCTTTCTCATC 58.427 40.000 0.00 0.00 0.00 2.92
529 531 6.154192 ACTGAAGACATCTAGCTTTCTCATCA 59.846 38.462 0.00 0.00 0.00 3.07
530 532 7.122138 TGAAGACATCTAGCTTTCTCATCAT 57.878 36.000 0.00 0.00 0.00 2.45
531 533 7.563020 TGAAGACATCTAGCTTTCTCATCATT 58.437 34.615 0.00 0.00 0.00 2.57
532 534 8.699130 TGAAGACATCTAGCTTTCTCATCATTA 58.301 33.333 0.00 0.00 0.00 1.90
533 535 9.539825 GAAGACATCTAGCTTTCTCATCATTAA 57.460 33.333 0.00 0.00 0.00 1.40
540 542 9.703892 TCTAGCTTTCTCATCATTAATTAGCTC 57.296 33.333 0.00 0.00 37.58 4.09
541 543 9.709495 CTAGCTTTCTCATCATTAATTAGCTCT 57.291 33.333 0.00 0.00 37.58 4.09
577 579 9.542462 TCATCTTGTTCTTTCCTATTATTACCG 57.458 33.333 0.00 0.00 0.00 4.02
578 580 9.542462 CATCTTGTTCTTTCCTATTATTACCGA 57.458 33.333 0.00 0.00 0.00 4.69
580 582 9.542462 TCTTGTTCTTTCCTATTATTACCGATG 57.458 33.333 0.00 0.00 0.00 3.84
581 583 7.724305 TGTTCTTTCCTATTATTACCGATGC 57.276 36.000 0.00 0.00 0.00 3.91
582 584 7.276658 TGTTCTTTCCTATTATTACCGATGCA 58.723 34.615 0.00 0.00 0.00 3.96
583 585 7.225931 TGTTCTTTCCTATTATTACCGATGCAC 59.774 37.037 0.00 0.00 0.00 4.57
584 586 6.822442 TCTTTCCTATTATTACCGATGCACA 58.178 36.000 0.00 0.00 0.00 4.57
585 587 7.276658 TCTTTCCTATTATTACCGATGCACAA 58.723 34.615 0.00 0.00 0.00 3.33
586 588 7.441157 TCTTTCCTATTATTACCGATGCACAAG 59.559 37.037 0.00 0.00 0.00 3.16
587 589 6.169557 TCCTATTATTACCGATGCACAAGT 57.830 37.500 0.00 0.00 0.00 3.16
588 590 6.220930 TCCTATTATTACCGATGCACAAGTC 58.779 40.000 0.00 0.00 0.00 3.01
589 591 5.989168 CCTATTATTACCGATGCACAAGTCA 59.011 40.000 0.00 0.00 0.00 3.41
590 592 6.481976 CCTATTATTACCGATGCACAAGTCAA 59.518 38.462 0.00 0.00 0.00 3.18
591 593 5.539582 TTATTACCGATGCACAAGTCAAC 57.460 39.130 0.00 0.00 0.00 3.18
592 594 2.831685 TACCGATGCACAAGTCAACT 57.168 45.000 0.00 0.00 0.00 3.16
593 595 1.967319 ACCGATGCACAAGTCAACTT 58.033 45.000 0.00 0.00 36.45 2.66
594 596 2.297701 ACCGATGCACAAGTCAACTTT 58.702 42.857 0.00 0.00 33.11 2.66
595 597 3.472652 ACCGATGCACAAGTCAACTTTA 58.527 40.909 0.00 0.00 33.11 1.85
596 598 3.498397 ACCGATGCACAAGTCAACTTTAG 59.502 43.478 0.00 0.00 33.11 1.85
597 599 3.498397 CCGATGCACAAGTCAACTTTAGT 59.502 43.478 0.00 0.00 33.11 2.24
598 600 4.688879 CCGATGCACAAGTCAACTTTAGTA 59.311 41.667 0.00 0.00 33.11 1.82
599 601 5.163953 CCGATGCACAAGTCAACTTTAGTAG 60.164 44.000 0.00 0.00 33.11 2.57
600 602 5.405571 CGATGCACAAGTCAACTTTAGTAGT 59.594 40.000 0.00 0.00 39.32 2.73
601 603 5.984233 TGCACAAGTCAACTTTAGTAGTG 57.016 39.130 6.13 6.13 37.12 2.74
602 604 5.424757 TGCACAAGTCAACTTTAGTAGTGT 58.575 37.500 10.26 0.00 37.12 3.55
603 605 5.293324 TGCACAAGTCAACTTTAGTAGTGTG 59.707 40.000 10.26 7.81 37.12 3.82
604 606 5.522460 GCACAAGTCAACTTTAGTAGTGTGA 59.478 40.000 11.22 0.00 37.12 3.58
605 607 6.292381 GCACAAGTCAACTTTAGTAGTGTGAG 60.292 42.308 11.22 0.00 37.12 3.51
606 608 6.978659 CACAAGTCAACTTTAGTAGTGTGAGA 59.021 38.462 3.82 0.00 37.12 3.27
607 609 7.491372 CACAAGTCAACTTTAGTAGTGTGAGAA 59.509 37.037 3.82 0.00 37.12 2.87
608 610 8.038944 ACAAGTCAACTTTAGTAGTGTGAGAAA 58.961 33.333 0.00 0.00 37.12 2.52
609 611 8.328864 CAAGTCAACTTTAGTAGTGTGAGAAAC 58.671 37.037 0.00 0.00 37.12 2.78
610 612 7.553334 AGTCAACTTTAGTAGTGTGAGAAACA 58.447 34.615 0.00 0.00 37.12 2.83
611 613 8.038944 AGTCAACTTTAGTAGTGTGAGAAACAA 58.961 33.333 0.00 0.00 41.57 2.83
612 614 8.328864 GTCAACTTTAGTAGTGTGAGAAACAAG 58.671 37.037 0.00 0.00 41.57 3.16
613 615 8.038944 TCAACTTTAGTAGTGTGAGAAACAAGT 58.961 33.333 0.00 0.00 41.57 3.16
614 616 8.665685 CAACTTTAGTAGTGTGAGAAACAAGTT 58.334 33.333 0.00 0.00 41.57 2.66
615 617 8.421673 ACTTTAGTAGTGTGAGAAACAAGTTC 57.578 34.615 0.00 0.00 41.57 3.01
616 618 8.038944 ACTTTAGTAGTGTGAGAAACAAGTTCA 58.961 33.333 0.00 0.00 41.57 3.18
617 619 8.958119 TTTAGTAGTGTGAGAAACAAGTTCAT 57.042 30.769 0.00 0.00 41.57 2.57
618 620 6.851222 AGTAGTGTGAGAAACAAGTTCATG 57.149 37.500 0.00 0.00 41.57 3.07
619 621 6.582636 AGTAGTGTGAGAAACAAGTTCATGA 58.417 36.000 0.00 0.00 41.57 3.07
620 622 5.998454 AGTGTGAGAAACAAGTTCATGAG 57.002 39.130 0.00 0.00 41.57 2.90
621 623 4.818546 AGTGTGAGAAACAAGTTCATGAGG 59.181 41.667 0.00 0.00 41.57 3.86
622 624 4.576463 GTGTGAGAAACAAGTTCATGAGGT 59.424 41.667 0.00 0.00 41.57 3.85
623 625 5.066505 GTGTGAGAAACAAGTTCATGAGGTT 59.933 40.000 0.00 0.00 41.57 3.50
624 626 5.296780 TGTGAGAAACAAGTTCATGAGGTTC 59.703 40.000 2.95 2.95 38.86 3.62
625 627 4.821805 TGAGAAACAAGTTCATGAGGTTCC 59.178 41.667 6.80 1.29 38.86 3.62
626 628 4.792068 AGAAACAAGTTCATGAGGTTCCA 58.208 39.130 6.80 0.00 38.86 3.53
627 629 5.388654 AGAAACAAGTTCATGAGGTTCCAT 58.611 37.500 6.80 0.00 38.86 3.41
628 630 5.242393 AGAAACAAGTTCATGAGGTTCCATG 59.758 40.000 6.80 0.00 43.88 3.66
629 631 4.104383 ACAAGTTCATGAGGTTCCATGT 57.896 40.909 0.00 0.00 43.22 3.21
630 632 4.473444 ACAAGTTCATGAGGTTCCATGTT 58.527 39.130 0.00 0.00 43.22 2.71
631 633 5.630121 ACAAGTTCATGAGGTTCCATGTTA 58.370 37.500 0.00 0.00 43.22 2.41
632 634 5.707298 ACAAGTTCATGAGGTTCCATGTTAG 59.293 40.000 0.00 0.00 43.22 2.34
633 635 4.265073 AGTTCATGAGGTTCCATGTTAGC 58.735 43.478 0.00 0.00 43.22 3.09
634 636 3.998913 TCATGAGGTTCCATGTTAGCA 57.001 42.857 0.00 0.00 43.22 3.49
635 637 4.299586 TCATGAGGTTCCATGTTAGCAA 57.700 40.909 0.00 0.00 43.22 3.91
636 638 4.661222 TCATGAGGTTCCATGTTAGCAAA 58.339 39.130 0.00 0.00 43.22 3.68
637 639 5.263599 TCATGAGGTTCCATGTTAGCAAAT 58.736 37.500 0.00 0.00 43.22 2.32
638 640 5.125900 TCATGAGGTTCCATGTTAGCAAATG 59.874 40.000 0.00 0.00 43.22 2.32
639 641 4.661222 TGAGGTTCCATGTTAGCAAATGA 58.339 39.130 0.00 0.00 0.00 2.57
640 642 5.263599 TGAGGTTCCATGTTAGCAAATGAT 58.736 37.500 0.00 0.00 0.00 2.45
641 643 5.716228 TGAGGTTCCATGTTAGCAAATGATT 59.284 36.000 0.00 0.00 0.00 2.57
642 644 6.211184 TGAGGTTCCATGTTAGCAAATGATTT 59.789 34.615 0.00 0.00 0.00 2.17
643 645 7.395772 TGAGGTTCCATGTTAGCAAATGATTTA 59.604 33.333 0.00 0.00 0.00 1.40
644 646 7.547227 AGGTTCCATGTTAGCAAATGATTTAC 58.453 34.615 0.00 0.00 0.00 2.01
645 647 6.756542 GGTTCCATGTTAGCAAATGATTTACC 59.243 38.462 0.00 0.00 0.00 2.85
646 648 7.363793 GGTTCCATGTTAGCAAATGATTTACCT 60.364 37.037 0.00 0.00 0.00 3.08
647 649 7.716799 TCCATGTTAGCAAATGATTTACCTT 57.283 32.000 0.00 0.00 0.00 3.50
648 650 8.133024 TCCATGTTAGCAAATGATTTACCTTT 57.867 30.769 0.00 0.00 0.00 3.11
649 651 8.034215 TCCATGTTAGCAAATGATTTACCTTTG 58.966 33.333 0.00 0.00 37.24 2.77
650 652 8.034215 CCATGTTAGCAAATGATTTACCTTTGA 58.966 33.333 0.00 0.00 36.63 2.69
651 653 9.421806 CATGTTAGCAAATGATTTACCTTTGAA 57.578 29.630 0.00 0.00 36.63 2.69
652 654 9.995003 ATGTTAGCAAATGATTTACCTTTGAAA 57.005 25.926 0.00 0.00 36.63 2.69
653 655 9.474920 TGTTAGCAAATGATTTACCTTTGAAAG 57.525 29.630 0.00 0.00 36.63 2.62
654 656 9.476202 GTTAGCAAATGATTTACCTTTGAAAGT 57.524 29.630 4.02 0.00 36.63 2.66
657 659 8.860088 AGCAAATGATTTACCTTTGAAAGTAGT 58.140 29.630 4.02 0.00 36.63 2.73
658 660 9.476202 GCAAATGATTTACCTTTGAAAGTAGTT 57.524 29.630 4.02 0.00 36.63 2.24
660 662 9.981114 AAATGATTTACCTTTGAAAGTAGTTGG 57.019 29.630 4.02 0.00 0.00 3.77
661 663 7.519032 TGATTTACCTTTGAAAGTAGTTGGG 57.481 36.000 4.02 0.00 0.00 4.12
662 664 7.291566 TGATTTACCTTTGAAAGTAGTTGGGA 58.708 34.615 4.02 0.00 0.00 4.37
663 665 7.947890 TGATTTACCTTTGAAAGTAGTTGGGAT 59.052 33.333 4.02 0.00 0.00 3.85
664 666 7.754851 TTTACCTTTGAAAGTAGTTGGGATC 57.245 36.000 4.02 0.00 0.00 3.36
665 667 5.584551 ACCTTTGAAAGTAGTTGGGATCT 57.415 39.130 4.02 0.00 0.00 2.75
666 668 5.561679 ACCTTTGAAAGTAGTTGGGATCTC 58.438 41.667 4.02 0.00 0.00 2.75
667 669 4.944317 CCTTTGAAAGTAGTTGGGATCTCC 59.056 45.833 4.02 0.00 0.00 3.71
668 670 5.514834 CCTTTGAAAGTAGTTGGGATCTCCA 60.515 44.000 4.02 0.00 45.43 3.86
669 671 5.779241 TTGAAAGTAGTTGGGATCTCCAT 57.221 39.130 4.04 0.00 46.52 3.41
670 672 5.102953 TGAAAGTAGTTGGGATCTCCATG 57.897 43.478 4.04 0.00 46.52 3.66
671 673 4.536090 TGAAAGTAGTTGGGATCTCCATGT 59.464 41.667 4.04 0.00 46.52 3.21
672 674 5.014123 TGAAAGTAGTTGGGATCTCCATGTT 59.986 40.000 4.04 0.00 46.52 2.71
673 675 5.520748 AAGTAGTTGGGATCTCCATGTTT 57.479 39.130 4.04 0.00 46.52 2.83
674 676 5.520748 AGTAGTTGGGATCTCCATGTTTT 57.479 39.130 4.04 0.00 46.52 2.43
675 677 5.892348 AGTAGTTGGGATCTCCATGTTTTT 58.108 37.500 4.04 0.00 46.52 1.94
676 678 5.711976 AGTAGTTGGGATCTCCATGTTTTTG 59.288 40.000 4.04 0.00 46.52 2.44
677 679 3.834231 AGTTGGGATCTCCATGTTTTTGG 59.166 43.478 4.04 0.00 46.52 3.28
678 680 3.824001 TGGGATCTCCATGTTTTTGGA 57.176 42.857 0.00 0.00 43.56 3.53
679 681 4.335735 TGGGATCTCCATGTTTTTGGAT 57.664 40.909 0.00 0.00 44.66 3.41
680 682 4.280819 TGGGATCTCCATGTTTTTGGATC 58.719 43.478 0.00 0.00 44.66 3.36
681 683 4.264307 TGGGATCTCCATGTTTTTGGATCA 60.264 41.667 0.00 0.00 44.66 2.92
682 684 4.098501 GGGATCTCCATGTTTTTGGATCAC 59.901 45.833 0.00 0.00 44.66 3.06
683 685 4.706476 GGATCTCCATGTTTTTGGATCACA 59.294 41.667 0.00 0.00 44.66 3.58
684 686 5.361857 GGATCTCCATGTTTTTGGATCACAT 59.638 40.000 0.00 0.00 44.66 3.21
685 687 5.902613 TCTCCATGTTTTTGGATCACATC 57.097 39.130 0.00 0.00 44.66 3.06
686 688 5.573219 TCTCCATGTTTTTGGATCACATCT 58.427 37.500 0.00 0.00 44.66 2.90
687 689 5.416639 TCTCCATGTTTTTGGATCACATCTG 59.583 40.000 0.00 0.00 44.66 2.90
688 690 5.323581 TCCATGTTTTTGGATCACATCTGA 58.676 37.500 0.00 0.00 40.90 3.27
689 691 5.953548 TCCATGTTTTTGGATCACATCTGAT 59.046 36.000 0.00 0.00 40.90 2.90
702 704 7.981102 ATCACATCTGATCACTATGAATTGG 57.019 36.000 16.59 4.80 30.64 3.16
703 705 6.293698 TCACATCTGATCACTATGAATTGGG 58.706 40.000 16.59 1.15 0.00 4.12
704 706 6.100134 TCACATCTGATCACTATGAATTGGGA 59.900 38.462 16.59 3.17 0.00 4.37
705 707 6.427242 CACATCTGATCACTATGAATTGGGAG 59.573 42.308 16.59 0.00 0.00 4.30
706 708 6.328410 ACATCTGATCACTATGAATTGGGAGA 59.672 38.462 16.59 0.00 0.00 3.71
707 709 6.416631 TCTGATCACTATGAATTGGGAGAG 57.583 41.667 0.00 0.00 0.00 3.20
708 710 4.965814 TGATCACTATGAATTGGGAGAGC 58.034 43.478 0.00 0.00 0.00 4.09
709 711 4.657504 TGATCACTATGAATTGGGAGAGCT 59.342 41.667 0.00 0.00 0.00 4.09
710 712 5.131642 TGATCACTATGAATTGGGAGAGCTT 59.868 40.000 0.00 0.00 0.00 3.74
711 713 6.327365 TGATCACTATGAATTGGGAGAGCTTA 59.673 38.462 0.00 0.00 0.00 3.09
712 714 6.753913 TCACTATGAATTGGGAGAGCTTAT 57.246 37.500 0.00 0.00 0.00 1.73
713 715 6.528321 TCACTATGAATTGGGAGAGCTTATG 58.472 40.000 0.00 0.00 0.00 1.90
714 716 6.100279 TCACTATGAATTGGGAGAGCTTATGT 59.900 38.462 0.00 0.00 0.00 2.29
715 717 6.204301 CACTATGAATTGGGAGAGCTTATGTG 59.796 42.308 0.00 0.00 0.00 3.21
716 718 4.574674 TGAATTGGGAGAGCTTATGTGT 57.425 40.909 0.00 0.00 0.00 3.72
717 719 4.264253 TGAATTGGGAGAGCTTATGTGTG 58.736 43.478 0.00 0.00 0.00 3.82
718 720 4.019411 TGAATTGGGAGAGCTTATGTGTGA 60.019 41.667 0.00 0.00 0.00 3.58
719 721 4.785346 ATTGGGAGAGCTTATGTGTGAT 57.215 40.909 0.00 0.00 0.00 3.06
720 722 3.827008 TGGGAGAGCTTATGTGTGATC 57.173 47.619 0.00 0.00 0.00 2.92
721 723 3.106827 TGGGAGAGCTTATGTGTGATCA 58.893 45.455 0.00 0.00 0.00 2.92
722 724 3.713248 TGGGAGAGCTTATGTGTGATCAT 59.287 43.478 0.00 0.00 0.00 2.45
723 725 4.063689 GGGAGAGCTTATGTGTGATCATG 58.936 47.826 0.00 0.00 0.00 3.07
724 726 3.497640 GGAGAGCTTATGTGTGATCATGC 59.502 47.826 0.00 0.00 0.00 4.06
725 727 3.474600 AGAGCTTATGTGTGATCATGCC 58.525 45.455 0.00 0.00 0.00 4.40
726 728 3.136077 AGAGCTTATGTGTGATCATGCCT 59.864 43.478 0.00 0.00 0.00 4.75
727 729 3.881688 GAGCTTATGTGTGATCATGCCTT 59.118 43.478 0.00 0.00 0.00 4.35
728 730 3.630769 AGCTTATGTGTGATCATGCCTTG 59.369 43.478 0.00 0.00 0.00 3.61
729 731 3.628942 GCTTATGTGTGATCATGCCTTGA 59.371 43.478 0.00 0.00 39.12 3.02
730 732 4.261072 GCTTATGTGTGATCATGCCTTGAG 60.261 45.833 0.00 0.00 37.89 3.02
731 733 3.639672 ATGTGTGATCATGCCTTGAGA 57.360 42.857 0.00 0.00 37.89 3.27
732 734 2.981898 TGTGTGATCATGCCTTGAGAG 58.018 47.619 0.00 0.00 37.89 3.20
733 735 2.568509 TGTGTGATCATGCCTTGAGAGA 59.431 45.455 0.00 0.00 37.89 3.10
736 738 4.005650 TGTGATCATGCCTTGAGAGAAAC 58.994 43.478 0.00 0.00 37.89 2.78
779 781 5.468409 TGAATTTTCAGACACGAGCAACATA 59.532 36.000 0.00 0.00 32.50 2.29
964 969 0.837691 TCTGAAGCTCCTGGCCTGAA 60.838 55.000 11.88 0.00 43.05 3.02
2416 2831 1.134220 TCCGGCAAGAACAACAAGACT 60.134 47.619 0.00 0.00 0.00 3.24
2809 3267 0.611896 AAACCCTGCCGGAATGAAGG 60.612 55.000 5.05 2.85 34.64 3.46
2907 3365 7.658179 TTACTTGCAGATTCACTAGTCAAAG 57.342 36.000 0.00 0.00 0.00 2.77
3037 3495 4.614749 AGACTCCCCTTATGAGATAGGGAT 59.385 45.833 8.74 0.00 45.67 3.85
3214 3672 0.892358 TGGGAGCGACTTGTACGACT 60.892 55.000 0.00 0.00 0.00 4.18
3249 3732 5.046878 ACATGATAGGTTGTTTCCTACGACA 60.047 40.000 0.00 0.00 42.12 4.35
3254 3737 3.135994 GGTTGTTTCCTACGACACATGT 58.864 45.455 0.00 0.00 42.12 3.21
3274 3757 8.390354 CACATGTATTATTGATTTCGTGTCACT 58.610 33.333 0.00 0.00 0.00 3.41
3341 3824 7.328249 ACCGTTATGCAAAATTGAATTAGTGTG 59.672 33.333 0.00 0.00 0.00 3.82
3342 3825 7.540400 CCGTTATGCAAAATTGAATTAGTGTGA 59.460 33.333 0.00 0.00 0.00 3.58
3393 3876 3.479231 CGTTTTCGTACACATGTAGTCGC 60.479 47.826 0.00 0.00 38.65 5.19
3469 3952 1.266867 GCAGCCACCCATCCCATTTT 61.267 55.000 0.00 0.00 0.00 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 7.929245 ACTATTAAAAACAAAAGCGATGGGTTT 59.071 29.630 0.00 0.00 45.21 3.27
2 3 7.438564 ACTATTAAAAACAAAAGCGATGGGTT 58.561 30.769 0.00 0.00 34.82 4.11
4 5 6.250527 CGACTATTAAAAACAAAAGCGATGGG 59.749 38.462 0.00 0.00 0.00 4.00
5 6 6.237201 GCGACTATTAAAAACAAAAGCGATGG 60.237 38.462 0.00 0.00 0.00 3.51
6 7 6.304445 TGCGACTATTAAAAACAAAAGCGATG 59.696 34.615 0.00 0.00 0.00 3.84
8 9 5.749620 TGCGACTATTAAAAACAAAAGCGA 58.250 33.333 0.00 0.00 0.00 4.93
9 10 6.075310 TGTTGCGACTATTAAAAACAAAAGCG 60.075 34.615 5.50 0.00 0.00 4.68
10 11 7.155858 TGTTGCGACTATTAAAAACAAAAGC 57.844 32.000 5.50 0.00 0.00 3.51
11 12 9.566624 CATTGTTGCGACTATTAAAAACAAAAG 57.433 29.630 5.50 0.00 39.94 2.27
12 13 8.058915 GCATTGTTGCGACTATTAAAAACAAAA 58.941 29.630 5.50 0.00 39.94 2.44
51 53 9.535878 GATTTGTTTGAGGTTATTGGTTTTGTA 57.464 29.630 0.00 0.00 0.00 2.41
53 55 8.430801 TGATTTGTTTGAGGTTATTGGTTTTG 57.569 30.769 0.00 0.00 0.00 2.44
63 65 7.495606 GGTCTGAAAAATGATTTGTTTGAGGTT 59.504 33.333 0.00 0.00 0.00 3.50
66 68 6.985645 TGGGTCTGAAAAATGATTTGTTTGAG 59.014 34.615 0.00 0.00 0.00 3.02
69 71 6.648192 TGTGGGTCTGAAAAATGATTTGTTT 58.352 32.000 0.00 0.00 0.00 2.83
72 74 5.697633 CCTTGTGGGTCTGAAAAATGATTTG 59.302 40.000 0.00 0.00 0.00 2.32
74 76 5.011023 GTCCTTGTGGGTCTGAAAAATGATT 59.989 40.000 0.00 0.00 36.25 2.57
79 81 2.243736 AGGTCCTTGTGGGTCTGAAAAA 59.756 45.455 0.00 0.00 36.25 1.94
84 86 1.002087 GTGTAGGTCCTTGTGGGTCTG 59.998 57.143 0.00 0.00 36.25 3.51
107 109 1.577328 CTGCTGTAAACACGGCTGGG 61.577 60.000 9.76 0.00 42.22 4.45
113 115 1.873591 AGCTTTCCTGCTGTAAACACG 59.126 47.619 0.00 0.00 42.33 4.49
128 130 3.754965 TGAGTTCACTTGGCATAGCTTT 58.245 40.909 0.00 0.00 0.00 3.51
131 133 2.615912 GGATGAGTTCACTTGGCATAGC 59.384 50.000 0.00 0.00 0.00 2.97
132 134 3.118112 AGGGATGAGTTCACTTGGCATAG 60.118 47.826 0.00 0.00 32.72 2.23
133 135 2.846206 AGGGATGAGTTCACTTGGCATA 59.154 45.455 0.00 0.00 32.72 3.14
141 143 0.615331 TCTGGCAGGGATGAGTTCAC 59.385 55.000 15.73 0.00 0.00 3.18
142 144 1.361204 TTCTGGCAGGGATGAGTTCA 58.639 50.000 15.73 0.00 0.00 3.18
143 145 2.496899 TTTCTGGCAGGGATGAGTTC 57.503 50.000 15.73 0.00 0.00 3.01
146 148 3.495806 GGAGTATTTCTGGCAGGGATGAG 60.496 52.174 15.73 0.00 0.00 2.90
147 149 2.439507 GGAGTATTTCTGGCAGGGATGA 59.560 50.000 15.73 0.00 0.00 2.92
151 153 1.839994 TCAGGAGTATTTCTGGCAGGG 59.160 52.381 15.73 0.00 0.00 4.45
155 157 2.482142 CGTCCTCAGGAGTATTTCTGGC 60.482 54.545 0.00 0.00 29.39 4.85
165 167 1.033574 GATACCCACGTCCTCAGGAG 58.966 60.000 0.00 0.00 29.39 3.69
167 169 2.359981 TAGATACCCACGTCCTCAGG 57.640 55.000 0.00 0.00 0.00 3.86
168 170 5.946972 AGAATATAGATACCCACGTCCTCAG 59.053 44.000 0.00 0.00 0.00 3.35
188 190 9.325198 GGTTTGTTTGAAACCAAAATAGAGAAT 57.675 29.630 5.50 0.00 46.74 2.40
189 191 8.710835 GGTTTGTTTGAAACCAAAATAGAGAA 57.289 30.769 5.50 0.00 46.74 2.87
204 206 9.658799 TCATTTAGATTTTGTTGGTTTGTTTGA 57.341 25.926 0.00 0.00 0.00 2.69
208 210 9.612066 ACAATCATTTAGATTTTGTTGGTTTGT 57.388 25.926 0.00 0.00 44.48 2.83
241 243 4.965200 ATACAGTGCCTAGGAGATTTCC 57.035 45.455 14.75 0.00 44.39 3.13
242 244 7.226918 GGTAAAATACAGTGCCTAGGAGATTTC 59.773 40.741 14.75 0.00 0.00 2.17
243 245 7.054751 GGTAAAATACAGTGCCTAGGAGATTT 58.945 38.462 14.75 5.21 0.00 2.17
244 246 6.157994 TGGTAAAATACAGTGCCTAGGAGATT 59.842 38.462 14.75 0.00 0.00 2.40
245 247 5.665812 TGGTAAAATACAGTGCCTAGGAGAT 59.334 40.000 14.75 0.00 0.00 2.75
246 248 5.027460 TGGTAAAATACAGTGCCTAGGAGA 58.973 41.667 14.75 0.00 0.00 3.71
247 249 5.353394 TGGTAAAATACAGTGCCTAGGAG 57.647 43.478 14.75 0.83 0.00 3.69
248 250 4.163458 CCTGGTAAAATACAGTGCCTAGGA 59.837 45.833 14.75 0.00 32.90 2.94
249 251 4.080526 ACCTGGTAAAATACAGTGCCTAGG 60.081 45.833 3.67 3.67 32.90 3.02
250 252 5.099042 ACCTGGTAAAATACAGTGCCTAG 57.901 43.478 0.00 0.00 32.90 3.02
251 253 5.221966 ACAACCTGGTAAAATACAGTGCCTA 60.222 40.000 0.00 0.00 32.90 3.93
252 254 4.079253 CAACCTGGTAAAATACAGTGCCT 58.921 43.478 0.00 0.00 32.90 4.75
253 255 3.824443 ACAACCTGGTAAAATACAGTGCC 59.176 43.478 0.00 0.00 32.90 5.01
254 256 4.082949 GGACAACCTGGTAAAATACAGTGC 60.083 45.833 0.00 0.00 32.90 4.40
255 257 5.313712 AGGACAACCTGGTAAAATACAGTG 58.686 41.667 0.00 0.00 45.92 3.66
256 258 5.578157 AGGACAACCTGGTAAAATACAGT 57.422 39.130 0.00 0.00 45.92 3.55
270 272 5.508657 GGAATATACGTGGTCTAGGACAACC 60.509 48.000 0.00 0.00 33.24 3.77
271 273 5.068198 TGGAATATACGTGGTCTAGGACAAC 59.932 44.000 0.00 0.00 33.48 3.32
272 274 5.202765 TGGAATATACGTGGTCTAGGACAA 58.797 41.667 0.00 0.00 33.68 3.18
273 275 4.795469 TGGAATATACGTGGTCTAGGACA 58.205 43.478 0.00 0.00 33.68 4.02
274 276 5.068636 TCTGGAATATACGTGGTCTAGGAC 58.931 45.833 0.00 0.00 0.00 3.85
275 277 5.314718 TCTGGAATATACGTGGTCTAGGA 57.685 43.478 0.00 0.00 0.00 2.94
276 278 5.047943 CCTTCTGGAATATACGTGGTCTAGG 60.048 48.000 0.00 0.00 34.57 3.02
277 279 5.565045 GCCTTCTGGAATATACGTGGTCTAG 60.565 48.000 0.00 0.00 34.57 2.43
278 280 4.280174 GCCTTCTGGAATATACGTGGTCTA 59.720 45.833 0.00 0.00 34.57 2.59
279 281 3.069729 GCCTTCTGGAATATACGTGGTCT 59.930 47.826 0.00 0.00 34.57 3.85
280 282 3.069729 AGCCTTCTGGAATATACGTGGTC 59.930 47.826 0.00 0.00 34.57 4.02
281 283 3.039011 AGCCTTCTGGAATATACGTGGT 58.961 45.455 0.00 0.00 34.57 4.16
282 284 3.555168 GGAGCCTTCTGGAATATACGTGG 60.555 52.174 0.00 0.00 34.57 4.94
283 285 3.322254 AGGAGCCTTCTGGAATATACGTG 59.678 47.826 0.00 0.00 34.57 4.49
284 286 3.577919 AGGAGCCTTCTGGAATATACGT 58.422 45.455 0.00 0.00 34.57 3.57
285 287 5.419155 TGATAGGAGCCTTCTGGAATATACG 59.581 44.000 0.00 0.00 34.57 3.06
286 288 6.859112 TGATAGGAGCCTTCTGGAATATAC 57.141 41.667 0.00 0.00 34.57 1.47
287 289 8.454859 AAATGATAGGAGCCTTCTGGAATATA 57.545 34.615 0.00 0.00 34.57 0.86
288 290 6.966637 AATGATAGGAGCCTTCTGGAATAT 57.033 37.500 0.00 0.00 34.57 1.28
289 291 6.770286 AAATGATAGGAGCCTTCTGGAATA 57.230 37.500 0.00 0.00 34.57 1.75
290 292 5.659849 AAATGATAGGAGCCTTCTGGAAT 57.340 39.130 0.00 0.00 34.57 3.01
291 293 6.158695 AGTTAAATGATAGGAGCCTTCTGGAA 59.841 38.462 0.00 0.00 34.57 3.53
292 294 5.667626 AGTTAAATGATAGGAGCCTTCTGGA 59.332 40.000 0.00 0.00 34.57 3.86
293 295 5.934781 AGTTAAATGATAGGAGCCTTCTGG 58.065 41.667 0.00 0.00 0.00 3.86
294 296 7.872113 AAAGTTAAATGATAGGAGCCTTCTG 57.128 36.000 0.00 0.00 0.00 3.02
295 297 9.975218 TTTAAAGTTAAATGATAGGAGCCTTCT 57.025 29.630 0.00 0.00 0.00 2.85
298 300 9.190317 CCTTTTAAAGTTAAATGATAGGAGCCT 57.810 33.333 3.91 0.00 32.48 4.58
299 301 9.185680 TCCTTTTAAAGTTAAATGATAGGAGCC 57.814 33.333 3.91 0.00 33.92 4.70
309 311 9.914131 GCTTGTCTCATCCTTTTAAAGTTAAAT 57.086 29.630 3.91 0.00 33.12 1.40
310 312 8.357402 GGCTTGTCTCATCCTTTTAAAGTTAAA 58.643 33.333 3.91 0.00 0.00 1.52
311 313 7.504238 TGGCTTGTCTCATCCTTTTAAAGTTAA 59.496 33.333 3.91 0.00 0.00 2.01
312 314 7.001674 TGGCTTGTCTCATCCTTTTAAAGTTA 58.998 34.615 3.91 0.00 0.00 2.24
313 315 5.833131 TGGCTTGTCTCATCCTTTTAAAGTT 59.167 36.000 3.91 0.00 0.00 2.66
314 316 5.385198 TGGCTTGTCTCATCCTTTTAAAGT 58.615 37.500 3.91 0.00 0.00 2.66
315 317 5.964958 TGGCTTGTCTCATCCTTTTAAAG 57.035 39.130 0.00 0.00 0.00 1.85
316 318 6.723298 TTTGGCTTGTCTCATCCTTTTAAA 57.277 33.333 0.00 0.00 0.00 1.52
317 319 6.239289 CCTTTTGGCTTGTCTCATCCTTTTAA 60.239 38.462 0.00 0.00 0.00 1.52
318 320 5.243730 CCTTTTGGCTTGTCTCATCCTTTTA 59.756 40.000 0.00 0.00 0.00 1.52
319 321 4.039609 CCTTTTGGCTTGTCTCATCCTTTT 59.960 41.667 0.00 0.00 0.00 2.27
320 322 3.575687 CCTTTTGGCTTGTCTCATCCTTT 59.424 43.478 0.00 0.00 0.00 3.11
321 323 3.160269 CCTTTTGGCTTGTCTCATCCTT 58.840 45.455 0.00 0.00 0.00 3.36
322 324 2.800250 CCTTTTGGCTTGTCTCATCCT 58.200 47.619 0.00 0.00 0.00 3.24
335 337 7.607991 TCTGAATACTAAGAAGAAGCCTTTTGG 59.392 37.037 0.00 0.00 44.18 3.28
336 338 8.553459 TCTGAATACTAAGAAGAAGCCTTTTG 57.447 34.615 0.00 0.00 31.62 2.44
337 339 9.746457 ATTCTGAATACTAAGAAGAAGCCTTTT 57.254 29.630 0.00 0.00 35.95 2.27
338 340 9.746457 AATTCTGAATACTAAGAAGAAGCCTTT 57.254 29.630 2.85 0.00 35.95 3.11
339 341 9.171877 CAATTCTGAATACTAAGAAGAAGCCTT 57.828 33.333 2.85 0.00 35.95 4.35
340 342 7.772757 CCAATTCTGAATACTAAGAAGAAGCCT 59.227 37.037 2.85 0.00 35.95 4.58
341 343 7.012799 CCCAATTCTGAATACTAAGAAGAAGCC 59.987 40.741 2.85 0.00 35.95 4.35
342 344 7.554476 ACCCAATTCTGAATACTAAGAAGAAGC 59.446 37.037 2.85 0.00 35.95 3.86
343 345 9.454859 AACCCAATTCTGAATACTAAGAAGAAG 57.545 33.333 2.85 0.00 35.95 2.85
344 346 9.807921 AAACCCAATTCTGAATACTAAGAAGAA 57.192 29.630 2.85 0.00 35.95 2.52
345 347 9.807921 AAAACCCAATTCTGAATACTAAGAAGA 57.192 29.630 2.85 0.00 35.95 2.87
347 349 9.020731 GGAAAACCCAATTCTGAATACTAAGAA 57.979 33.333 2.85 0.00 34.36 2.52
348 350 8.167392 TGGAAAACCCAATTCTGAATACTAAGA 58.833 33.333 2.85 0.00 43.29 2.10
349 351 8.348285 TGGAAAACCCAATTCTGAATACTAAG 57.652 34.615 2.85 0.00 43.29 2.18
367 369 3.674997 TGCTGATCTAGGTGTGGAAAAC 58.325 45.455 0.00 0.00 0.00 2.43
368 370 4.365514 TTGCTGATCTAGGTGTGGAAAA 57.634 40.909 0.00 0.00 0.00 2.29
369 371 4.264253 CATTGCTGATCTAGGTGTGGAAA 58.736 43.478 0.00 0.00 0.00 3.13
370 372 3.877559 CATTGCTGATCTAGGTGTGGAA 58.122 45.455 0.00 0.00 0.00 3.53
371 373 2.420547 GCATTGCTGATCTAGGTGTGGA 60.421 50.000 0.16 0.00 0.00 4.02
372 374 1.945394 GCATTGCTGATCTAGGTGTGG 59.055 52.381 0.16 0.00 0.00 4.17
373 375 1.945394 GGCATTGCTGATCTAGGTGTG 59.055 52.381 8.82 0.00 0.00 3.82
374 376 1.561076 TGGCATTGCTGATCTAGGTGT 59.439 47.619 8.82 0.00 0.00 4.16
375 377 1.945394 GTGGCATTGCTGATCTAGGTG 59.055 52.381 8.82 0.00 0.00 4.00
376 378 1.133976 GGTGGCATTGCTGATCTAGGT 60.134 52.381 8.82 0.00 0.00 3.08
377 379 1.142465 AGGTGGCATTGCTGATCTAGG 59.858 52.381 8.82 0.00 0.00 3.02
378 380 2.158856 TCAGGTGGCATTGCTGATCTAG 60.159 50.000 8.82 0.00 0.00 2.43
379 381 1.839354 TCAGGTGGCATTGCTGATCTA 59.161 47.619 8.82 0.00 0.00 1.98
380 382 0.622136 TCAGGTGGCATTGCTGATCT 59.378 50.000 8.82 0.00 0.00 2.75
381 383 1.607628 GATCAGGTGGCATTGCTGATC 59.392 52.381 17.58 17.58 42.02 2.92
382 384 1.214673 AGATCAGGTGGCATTGCTGAT 59.785 47.619 8.82 9.50 37.46 2.90
383 385 0.622136 AGATCAGGTGGCATTGCTGA 59.378 50.000 8.82 4.70 0.00 4.26
384 386 1.945394 GTAGATCAGGTGGCATTGCTG 59.055 52.381 8.82 0.00 0.00 4.41
385 387 1.842562 AGTAGATCAGGTGGCATTGCT 59.157 47.619 8.82 0.00 0.00 3.91
386 388 2.338577 AGTAGATCAGGTGGCATTGC 57.661 50.000 0.00 0.00 0.00 3.56
387 389 3.643320 TCCTAGTAGATCAGGTGGCATTG 59.357 47.826 0.00 0.00 33.37 2.82
388 390 3.900601 CTCCTAGTAGATCAGGTGGCATT 59.099 47.826 0.00 0.00 33.37 3.56
389 391 3.141083 TCTCCTAGTAGATCAGGTGGCAT 59.859 47.826 0.00 0.00 33.37 4.40
390 392 2.514160 TCTCCTAGTAGATCAGGTGGCA 59.486 50.000 0.00 0.00 33.37 4.92
391 393 3.231207 TCTCCTAGTAGATCAGGTGGC 57.769 52.381 0.00 0.00 33.37 5.01
392 394 5.450453 TCTTTCTCCTAGTAGATCAGGTGG 58.550 45.833 0.00 0.00 33.37 4.61
393 395 6.378564 TGTTCTTTCTCCTAGTAGATCAGGTG 59.621 42.308 0.00 0.00 33.37 4.00
394 396 6.378848 GTGTTCTTTCTCCTAGTAGATCAGGT 59.621 42.308 0.00 0.00 33.37 4.00
395 397 6.183360 GGTGTTCTTTCTCCTAGTAGATCAGG 60.183 46.154 0.00 0.00 0.00 3.86
396 398 6.378564 TGGTGTTCTTTCTCCTAGTAGATCAG 59.621 42.308 0.00 0.00 0.00 2.90
397 399 6.253758 TGGTGTTCTTTCTCCTAGTAGATCA 58.746 40.000 0.00 0.00 0.00 2.92
398 400 6.777213 TGGTGTTCTTTCTCCTAGTAGATC 57.223 41.667 0.00 0.00 0.00 2.75
399 401 7.621683 AGATTGGTGTTCTTTCTCCTAGTAGAT 59.378 37.037 0.00 0.00 0.00 1.98
400 402 6.954684 AGATTGGTGTTCTTTCTCCTAGTAGA 59.045 38.462 0.00 0.00 0.00 2.59
401 403 7.123547 AGAGATTGGTGTTCTTTCTCCTAGTAG 59.876 40.741 0.00 0.00 34.67 2.57
402 404 6.954684 AGAGATTGGTGTTCTTTCTCCTAGTA 59.045 38.462 0.00 0.00 34.67 1.82
403 405 5.782845 AGAGATTGGTGTTCTTTCTCCTAGT 59.217 40.000 0.00 0.00 34.67 2.57
404 406 6.105333 CAGAGATTGGTGTTCTTTCTCCTAG 58.895 44.000 0.00 0.00 34.67 3.02
405 407 5.544176 ACAGAGATTGGTGTTCTTTCTCCTA 59.456 40.000 0.00 0.00 34.67 2.94
406 408 4.349342 ACAGAGATTGGTGTTCTTTCTCCT 59.651 41.667 0.00 0.00 34.67 3.69
407 409 4.646572 ACAGAGATTGGTGTTCTTTCTCC 58.353 43.478 0.00 0.00 34.67 3.71
408 410 6.876257 ACATACAGAGATTGGTGTTCTTTCTC 59.124 38.462 0.00 0.00 34.40 2.87
409 411 6.652481 CACATACAGAGATTGGTGTTCTTTCT 59.348 38.462 0.00 0.00 30.40 2.52
410 412 6.128172 CCACATACAGAGATTGGTGTTCTTTC 60.128 42.308 0.00 0.00 30.40 2.62
411 413 5.707298 CCACATACAGAGATTGGTGTTCTTT 59.293 40.000 0.00 0.00 30.40 2.52
412 414 5.248640 CCACATACAGAGATTGGTGTTCTT 58.751 41.667 0.00 0.00 30.40 2.52
413 415 4.323792 CCCACATACAGAGATTGGTGTTCT 60.324 45.833 0.00 0.00 30.40 3.01
414 416 3.941483 CCCACATACAGAGATTGGTGTTC 59.059 47.826 0.00 0.00 30.40 3.18
415 417 3.308402 CCCCACATACAGAGATTGGTGTT 60.308 47.826 0.00 0.00 30.40 3.32
416 418 2.239654 CCCCACATACAGAGATTGGTGT 59.760 50.000 0.00 0.00 32.22 4.16
417 419 2.923121 CCCCACATACAGAGATTGGTG 58.077 52.381 0.00 0.00 0.00 4.17
418 420 1.212935 GCCCCACATACAGAGATTGGT 59.787 52.381 0.00 0.00 0.00 3.67
419 421 1.212688 TGCCCCACATACAGAGATTGG 59.787 52.381 0.00 0.00 0.00 3.16
420 422 2.684881 GTTGCCCCACATACAGAGATTG 59.315 50.000 0.00 0.00 0.00 2.67
421 423 2.308570 TGTTGCCCCACATACAGAGATT 59.691 45.455 0.00 0.00 0.00 2.40
422 424 1.915489 TGTTGCCCCACATACAGAGAT 59.085 47.619 0.00 0.00 0.00 2.75
423 425 1.357137 TGTTGCCCCACATACAGAGA 58.643 50.000 0.00 0.00 0.00 3.10
424 426 2.292267 GATGTTGCCCCACATACAGAG 58.708 52.381 0.00 0.00 37.52 3.35
425 427 1.632920 TGATGTTGCCCCACATACAGA 59.367 47.619 0.00 0.00 37.52 3.41
426 428 2.127271 TGATGTTGCCCCACATACAG 57.873 50.000 0.00 0.00 37.52 2.74
427 429 2.824689 ATGATGTTGCCCCACATACA 57.175 45.000 0.00 0.00 37.52 2.29
428 430 5.789643 ATTAATGATGTTGCCCCACATAC 57.210 39.130 0.00 0.00 37.52 2.39
429 431 6.663093 GGATATTAATGATGTTGCCCCACATA 59.337 38.462 0.00 0.00 37.52 2.29
430 432 5.481473 GGATATTAATGATGTTGCCCCACAT 59.519 40.000 0.00 0.00 40.25 3.21
431 433 4.832266 GGATATTAATGATGTTGCCCCACA 59.168 41.667 0.00 0.00 0.00 4.17
432 434 5.079643 AGGATATTAATGATGTTGCCCCAC 58.920 41.667 0.00 0.00 0.00 4.61
433 435 5.074929 AGAGGATATTAATGATGTTGCCCCA 59.925 40.000 0.00 0.00 0.00 4.96
434 436 5.574188 AGAGGATATTAATGATGTTGCCCC 58.426 41.667 0.00 0.00 0.00 5.80
435 437 8.635765 TTTAGAGGATATTAATGATGTTGCCC 57.364 34.615 0.00 0.00 0.00 5.36
451 453 6.851836 TCCCTGATAGTTTGGATTTAGAGGAT 59.148 38.462 0.00 0.00 0.00 3.24
452 454 6.209774 TCCCTGATAGTTTGGATTTAGAGGA 58.790 40.000 0.00 0.00 0.00 3.71
458 460 6.139679 TGTTCTCCCTGATAGTTTGGATTT 57.860 37.500 0.00 0.00 0.00 2.17
459 461 5.779241 TGTTCTCCCTGATAGTTTGGATT 57.221 39.130 0.00 0.00 0.00 3.01
460 462 5.779241 TTGTTCTCCCTGATAGTTTGGAT 57.221 39.130 0.00 0.00 0.00 3.41
461 463 5.488919 AGATTGTTCTCCCTGATAGTTTGGA 59.511 40.000 0.00 0.00 0.00 3.53
462 464 5.749462 AGATTGTTCTCCCTGATAGTTTGG 58.251 41.667 0.00 0.00 0.00 3.28
463 465 6.409704 TGAGATTGTTCTCCCTGATAGTTTG 58.590 40.000 0.83 0.00 46.67 2.93
464 466 6.352565 CCTGAGATTGTTCTCCCTGATAGTTT 60.353 42.308 0.83 0.00 46.67 2.66
465 467 5.130145 CCTGAGATTGTTCTCCCTGATAGTT 59.870 44.000 0.83 0.00 46.67 2.24
466 468 4.653341 CCTGAGATTGTTCTCCCTGATAGT 59.347 45.833 0.83 0.00 46.67 2.12
467 469 4.898265 TCCTGAGATTGTTCTCCCTGATAG 59.102 45.833 0.83 0.00 46.67 2.08
468 470 4.883759 TCCTGAGATTGTTCTCCCTGATA 58.116 43.478 0.83 0.00 46.67 2.15
469 471 3.729108 TCCTGAGATTGTTCTCCCTGAT 58.271 45.455 0.83 0.00 46.67 2.90
470 472 3.190383 TCCTGAGATTGTTCTCCCTGA 57.810 47.619 0.83 0.00 46.67 3.86
471 473 4.500499 AATCCTGAGATTGTTCTCCCTG 57.500 45.455 0.83 0.00 46.67 4.45
472 474 5.488919 TGTTAATCCTGAGATTGTTCTCCCT 59.511 40.000 0.83 0.00 46.67 4.20
473 475 5.745227 TGTTAATCCTGAGATTGTTCTCCC 58.255 41.667 0.83 0.00 46.67 4.30
474 476 8.964476 TTATGTTAATCCTGAGATTGTTCTCC 57.036 34.615 0.83 0.00 46.67 3.71
476 478 8.049117 TGCTTATGTTAATCCTGAGATTGTTCT 58.951 33.333 0.00 0.00 42.78 3.01
477 479 8.213518 TGCTTATGTTAATCCTGAGATTGTTC 57.786 34.615 0.00 0.00 42.78 3.18
478 480 8.579850 TTGCTTATGTTAATCCTGAGATTGTT 57.420 30.769 0.00 0.00 42.78 2.83
479 481 8.462016 GTTTGCTTATGTTAATCCTGAGATTGT 58.538 33.333 0.00 0.00 42.78 2.71
480 482 8.680903 AGTTTGCTTATGTTAATCCTGAGATTG 58.319 33.333 0.00 0.00 42.78 2.67
481 483 8.680903 CAGTTTGCTTATGTTAATCCTGAGATT 58.319 33.333 0.00 0.00 44.95 2.40
482 484 8.049117 TCAGTTTGCTTATGTTAATCCTGAGAT 58.951 33.333 0.00 0.00 0.00 2.75
483 485 7.394016 TCAGTTTGCTTATGTTAATCCTGAGA 58.606 34.615 0.00 0.00 0.00 3.27
484 486 7.615582 TCAGTTTGCTTATGTTAATCCTGAG 57.384 36.000 0.00 0.00 0.00 3.35
485 487 7.882791 TCTTCAGTTTGCTTATGTTAATCCTGA 59.117 33.333 0.00 0.00 0.00 3.86
486 488 7.965107 GTCTTCAGTTTGCTTATGTTAATCCTG 59.035 37.037 0.00 0.00 0.00 3.86
487 489 7.665559 TGTCTTCAGTTTGCTTATGTTAATCCT 59.334 33.333 0.00 0.00 0.00 3.24
488 490 7.816640 TGTCTTCAGTTTGCTTATGTTAATCC 58.183 34.615 0.00 0.00 0.00 3.01
489 491 9.495754 GATGTCTTCAGTTTGCTTATGTTAATC 57.504 33.333 0.00 0.00 0.00 1.75
490 492 9.236006 AGATGTCTTCAGTTTGCTTATGTTAAT 57.764 29.630 0.00 0.00 0.00 1.40
491 493 8.621532 AGATGTCTTCAGTTTGCTTATGTTAA 57.378 30.769 0.00 0.00 0.00 2.01
492 494 9.371136 CTAGATGTCTTCAGTTTGCTTATGTTA 57.629 33.333 0.00 0.00 0.00 2.41
493 495 7.148340 GCTAGATGTCTTCAGTTTGCTTATGTT 60.148 37.037 0.00 0.00 0.00 2.71
494 496 6.314896 GCTAGATGTCTTCAGTTTGCTTATGT 59.685 38.462 0.00 0.00 0.00 2.29
495 497 6.538021 AGCTAGATGTCTTCAGTTTGCTTATG 59.462 38.462 0.00 0.00 0.00 1.90
496 498 6.648192 AGCTAGATGTCTTCAGTTTGCTTAT 58.352 36.000 0.00 0.00 0.00 1.73
497 499 6.042638 AGCTAGATGTCTTCAGTTTGCTTA 57.957 37.500 0.00 0.00 0.00 3.09
498 500 4.904241 AGCTAGATGTCTTCAGTTTGCTT 58.096 39.130 0.00 0.00 0.00 3.91
499 501 4.550076 AGCTAGATGTCTTCAGTTTGCT 57.450 40.909 0.00 0.00 0.00 3.91
500 502 5.411053 AGAAAGCTAGATGTCTTCAGTTTGC 59.589 40.000 0.00 0.00 0.00 3.68
501 503 6.648310 TGAGAAAGCTAGATGTCTTCAGTTTG 59.352 38.462 1.36 0.00 0.00 2.93
502 504 6.763355 TGAGAAAGCTAGATGTCTTCAGTTT 58.237 36.000 1.36 0.00 0.00 2.66
503 505 6.352016 TGAGAAAGCTAGATGTCTTCAGTT 57.648 37.500 1.36 0.00 0.00 3.16
504 506 5.991933 TGAGAAAGCTAGATGTCTTCAGT 57.008 39.130 1.36 0.00 0.00 3.41
505 507 6.571605 TGATGAGAAAGCTAGATGTCTTCAG 58.428 40.000 1.36 0.00 0.00 3.02
506 508 6.535963 TGATGAGAAAGCTAGATGTCTTCA 57.464 37.500 1.36 0.24 0.00 3.02
507 509 9.539825 TTAATGATGAGAAAGCTAGATGTCTTC 57.460 33.333 1.36 0.00 0.00 2.87
514 516 9.703892 GAGCTAATTAATGATGAGAAAGCTAGA 57.296 33.333 0.00 0.00 37.87 2.43
515 517 9.709495 AGAGCTAATTAATGATGAGAAAGCTAG 57.291 33.333 0.00 0.00 37.87 3.42
551 553 9.542462 CGGTAATAATAGGAAAGAACAAGATGA 57.458 33.333 0.00 0.00 0.00 2.92
552 554 9.542462 TCGGTAATAATAGGAAAGAACAAGATG 57.458 33.333 0.00 0.00 0.00 2.90
554 556 9.542462 CATCGGTAATAATAGGAAAGAACAAGA 57.458 33.333 0.00 0.00 0.00 3.02
555 557 8.283291 GCATCGGTAATAATAGGAAAGAACAAG 58.717 37.037 0.00 0.00 0.00 3.16
556 558 7.771361 TGCATCGGTAATAATAGGAAAGAACAA 59.229 33.333 0.00 0.00 0.00 2.83
557 559 7.225931 GTGCATCGGTAATAATAGGAAAGAACA 59.774 37.037 0.00 0.00 0.00 3.18
558 560 7.225931 TGTGCATCGGTAATAATAGGAAAGAAC 59.774 37.037 0.00 0.00 0.00 3.01
559 561 7.276658 TGTGCATCGGTAATAATAGGAAAGAA 58.723 34.615 0.00 0.00 0.00 2.52
560 562 6.822442 TGTGCATCGGTAATAATAGGAAAGA 58.178 36.000 0.00 0.00 0.00 2.52
561 563 7.226720 ACTTGTGCATCGGTAATAATAGGAAAG 59.773 37.037 0.00 0.00 0.00 2.62
562 564 7.051623 ACTTGTGCATCGGTAATAATAGGAAA 58.948 34.615 0.00 0.00 0.00 3.13
563 565 6.588204 ACTTGTGCATCGGTAATAATAGGAA 58.412 36.000 0.00 0.00 0.00 3.36
564 566 6.169557 ACTTGTGCATCGGTAATAATAGGA 57.830 37.500 0.00 0.00 0.00 2.94
565 567 5.989168 TGACTTGTGCATCGGTAATAATAGG 59.011 40.000 0.00 0.00 0.00 2.57
566 568 7.224753 AGTTGACTTGTGCATCGGTAATAATAG 59.775 37.037 0.00 0.00 0.00 1.73
567 569 7.045416 AGTTGACTTGTGCATCGGTAATAATA 58.955 34.615 0.00 0.00 0.00 0.98
568 570 5.880332 AGTTGACTTGTGCATCGGTAATAAT 59.120 36.000 0.00 0.00 0.00 1.28
569 571 5.242434 AGTTGACTTGTGCATCGGTAATAA 58.758 37.500 0.00 0.00 0.00 1.40
570 572 4.827692 AGTTGACTTGTGCATCGGTAATA 58.172 39.130 0.00 0.00 0.00 0.98
571 573 3.674997 AGTTGACTTGTGCATCGGTAAT 58.325 40.909 0.00 0.00 0.00 1.89
572 574 3.120321 AGTTGACTTGTGCATCGGTAA 57.880 42.857 0.00 0.00 0.00 2.85
573 575 2.831685 AGTTGACTTGTGCATCGGTA 57.168 45.000 0.00 0.00 0.00 4.02
574 576 1.967319 AAGTTGACTTGTGCATCGGT 58.033 45.000 0.00 0.00 34.38 4.69
575 577 3.498397 ACTAAAGTTGACTTGTGCATCGG 59.502 43.478 0.00 0.00 36.12 4.18
576 578 4.732285 ACTAAAGTTGACTTGTGCATCG 57.268 40.909 0.00 0.00 36.12 3.84
577 579 6.202954 ACACTACTAAAGTTGACTTGTGCATC 59.797 38.462 9.75 0.00 35.76 3.91
578 580 6.017934 CACACTACTAAAGTTGACTTGTGCAT 60.018 38.462 9.75 0.00 35.76 3.96
579 581 5.293324 CACACTACTAAAGTTGACTTGTGCA 59.707 40.000 9.75 0.00 35.76 4.57
580 582 5.522460 TCACACTACTAAAGTTGACTTGTGC 59.478 40.000 9.75 0.00 35.76 4.57
581 583 6.978659 TCTCACACTACTAAAGTTGACTTGTG 59.021 38.462 8.76 8.76 35.76 3.33
582 584 7.108841 TCTCACACTACTAAAGTTGACTTGT 57.891 36.000 0.00 0.00 35.76 3.16
583 585 8.328864 GTTTCTCACACTACTAAAGTTGACTTG 58.671 37.037 0.00 0.00 35.76 3.16
584 586 8.038944 TGTTTCTCACACTACTAAAGTTGACTT 58.961 33.333 0.00 0.00 35.76 3.01
585 587 7.553334 TGTTTCTCACACTACTAAAGTTGACT 58.447 34.615 0.00 0.00 35.76 3.41
586 588 7.766219 TGTTTCTCACACTACTAAAGTTGAC 57.234 36.000 0.00 0.00 35.76 3.18
587 589 8.038944 ACTTGTTTCTCACACTACTAAAGTTGA 58.961 33.333 0.00 0.00 35.76 3.18
588 590 8.197988 ACTTGTTTCTCACACTACTAAAGTTG 57.802 34.615 0.00 0.00 35.76 3.16
589 591 8.788325 AACTTGTTTCTCACACTACTAAAGTT 57.212 30.769 0.00 0.00 35.76 2.66
590 592 8.038944 TGAACTTGTTTCTCACACTACTAAAGT 58.961 33.333 0.00 0.00 35.29 2.66
591 593 8.420374 TGAACTTGTTTCTCACACTACTAAAG 57.580 34.615 0.00 0.00 33.98 1.85
592 594 8.826710 CATGAACTTGTTTCTCACACTACTAAA 58.173 33.333 0.00 0.00 33.98 1.85
593 595 8.201464 TCATGAACTTGTTTCTCACACTACTAA 58.799 33.333 0.00 0.00 33.98 2.24
594 596 7.722363 TCATGAACTTGTTTCTCACACTACTA 58.278 34.615 0.00 0.00 33.98 1.82
595 597 6.582636 TCATGAACTTGTTTCTCACACTACT 58.417 36.000 0.00 0.00 33.98 2.57
596 598 6.073548 CCTCATGAACTTGTTTCTCACACTAC 60.074 42.308 0.00 0.00 33.98 2.73
597 599 5.991606 CCTCATGAACTTGTTTCTCACACTA 59.008 40.000 0.00 0.00 33.98 2.74
598 600 4.818546 CCTCATGAACTTGTTTCTCACACT 59.181 41.667 0.00 0.00 33.98 3.55
599 601 4.576463 ACCTCATGAACTTGTTTCTCACAC 59.424 41.667 0.00 0.00 33.98 3.82
600 602 4.780815 ACCTCATGAACTTGTTTCTCACA 58.219 39.130 0.00 0.00 34.97 3.58
601 603 5.278022 GGAACCTCATGAACTTGTTTCTCAC 60.278 44.000 0.00 0.00 34.97 3.51
602 604 4.821805 GGAACCTCATGAACTTGTTTCTCA 59.178 41.667 0.00 0.00 34.97 3.27
603 605 4.821805 TGGAACCTCATGAACTTGTTTCTC 59.178 41.667 0.00 0.00 34.97 2.87
604 606 4.792068 TGGAACCTCATGAACTTGTTTCT 58.208 39.130 0.00 0.00 34.97 2.52
605 607 5.010012 ACATGGAACCTCATGAACTTGTTTC 59.990 40.000 11.20 0.00 45.30 2.78
606 608 4.895297 ACATGGAACCTCATGAACTTGTTT 59.105 37.500 11.20 0.00 45.30 2.83
607 609 4.473444 ACATGGAACCTCATGAACTTGTT 58.527 39.130 11.20 0.00 45.30 2.83
608 610 4.104383 ACATGGAACCTCATGAACTTGT 57.896 40.909 11.20 0.00 45.30 3.16
609 611 5.392380 GCTAACATGGAACCTCATGAACTTG 60.392 44.000 11.20 0.00 45.30 3.16
610 612 4.702131 GCTAACATGGAACCTCATGAACTT 59.298 41.667 11.20 0.00 45.30 2.66
611 613 4.263462 TGCTAACATGGAACCTCATGAACT 60.263 41.667 11.20 0.00 45.30 3.01
612 614 4.009675 TGCTAACATGGAACCTCATGAAC 58.990 43.478 11.20 0.00 45.30 3.18
613 615 4.299586 TGCTAACATGGAACCTCATGAA 57.700 40.909 11.20 0.00 45.30 2.57
614 616 3.998913 TGCTAACATGGAACCTCATGA 57.001 42.857 11.20 0.00 45.30 3.07
616 618 5.263599 TCATTTGCTAACATGGAACCTCAT 58.736 37.500 0.00 0.00 0.00 2.90
617 619 4.661222 TCATTTGCTAACATGGAACCTCA 58.339 39.130 0.00 0.00 0.00 3.86
618 620 5.841957 ATCATTTGCTAACATGGAACCTC 57.158 39.130 0.00 0.00 0.00 3.85
619 621 6.610075 AAATCATTTGCTAACATGGAACCT 57.390 33.333 0.00 0.00 0.00 3.50
620 622 6.756542 GGTAAATCATTTGCTAACATGGAACC 59.243 38.462 0.00 0.00 0.00 3.62
621 623 7.547227 AGGTAAATCATTTGCTAACATGGAAC 58.453 34.615 0.00 0.00 0.00 3.62
622 624 7.716799 AGGTAAATCATTTGCTAACATGGAA 57.283 32.000 0.00 0.00 0.00 3.53
623 625 7.716799 AAGGTAAATCATTTGCTAACATGGA 57.283 32.000 0.00 0.00 0.00 3.41
624 626 8.034215 TCAAAGGTAAATCATTTGCTAACATGG 58.966 33.333 0.00 0.00 44.30 3.66
625 627 8.984891 TCAAAGGTAAATCATTTGCTAACATG 57.015 30.769 0.00 0.00 44.30 3.21
626 628 9.995003 TTTCAAAGGTAAATCATTTGCTAACAT 57.005 25.926 0.00 0.00 44.30 2.71
627 629 9.474920 CTTTCAAAGGTAAATCATTTGCTAACA 57.525 29.630 0.00 0.00 44.30 2.41
628 630 9.476202 ACTTTCAAAGGTAAATCATTTGCTAAC 57.524 29.630 1.31 0.00 44.30 2.34
631 633 8.860088 ACTACTTTCAAAGGTAAATCATTTGCT 58.140 29.630 1.31 0.00 44.30 3.91
632 634 9.476202 AACTACTTTCAAAGGTAAATCATTTGC 57.524 29.630 1.31 0.00 44.30 3.68
634 636 9.981114 CCAACTACTTTCAAAGGTAAATCATTT 57.019 29.630 1.31 0.00 0.00 2.32
635 637 8.585018 CCCAACTACTTTCAAAGGTAAATCATT 58.415 33.333 1.31 0.00 0.00 2.57
636 638 7.947890 TCCCAACTACTTTCAAAGGTAAATCAT 59.052 33.333 1.31 0.00 0.00 2.45
637 639 7.291566 TCCCAACTACTTTCAAAGGTAAATCA 58.708 34.615 1.31 0.00 0.00 2.57
638 640 7.754851 TCCCAACTACTTTCAAAGGTAAATC 57.245 36.000 1.31 0.00 0.00 2.17
639 641 8.170730 AGATCCCAACTACTTTCAAAGGTAAAT 58.829 33.333 1.31 0.00 0.00 1.40
640 642 7.523415 AGATCCCAACTACTTTCAAAGGTAAA 58.477 34.615 1.31 0.00 0.00 2.01
641 643 7.086685 AGATCCCAACTACTTTCAAAGGTAA 57.913 36.000 1.31 0.00 0.00 2.85
642 644 6.296259 GGAGATCCCAACTACTTTCAAAGGTA 60.296 42.308 1.31 0.00 34.14 3.08
643 645 5.515008 GGAGATCCCAACTACTTTCAAAGGT 60.515 44.000 1.31 0.00 34.14 3.50
644 646 4.944317 GGAGATCCCAACTACTTTCAAAGG 59.056 45.833 1.31 0.00 34.14 3.11
645 647 5.560724 TGGAGATCCCAACTACTTTCAAAG 58.439 41.667 0.00 0.00 43.29 2.77
646 648 5.576563 TGGAGATCCCAACTACTTTCAAA 57.423 39.130 0.84 0.00 43.29 2.69
666 668 5.648178 TCAGATGTGATCCAAAAACATGG 57.352 39.130 0.00 0.00 42.12 3.66
678 680 6.940867 CCCAATTCATAGTGATCAGATGTGAT 59.059 38.462 4.78 4.78 46.75 3.06
679 681 6.100134 TCCCAATTCATAGTGATCAGATGTGA 59.900 38.462 14.35 9.41 37.02 3.58
680 682 6.293698 TCCCAATTCATAGTGATCAGATGTG 58.706 40.000 14.35 7.56 0.00 3.21
681 683 6.328410 TCTCCCAATTCATAGTGATCAGATGT 59.672 38.462 14.35 0.00 0.00 3.06
682 684 6.766429 TCTCCCAATTCATAGTGATCAGATG 58.234 40.000 10.17 10.17 0.00 2.90
683 685 6.520401 GCTCTCCCAATTCATAGTGATCAGAT 60.520 42.308 0.00 0.00 0.00 2.90
684 686 5.221601 GCTCTCCCAATTCATAGTGATCAGA 60.222 44.000 0.00 0.00 0.00 3.27
685 687 4.996122 GCTCTCCCAATTCATAGTGATCAG 59.004 45.833 0.00 0.00 0.00 2.90
686 688 4.657504 AGCTCTCCCAATTCATAGTGATCA 59.342 41.667 0.00 0.00 0.00 2.92
687 689 5.226194 AGCTCTCCCAATTCATAGTGATC 57.774 43.478 0.00 0.00 0.00 2.92
688 690 5.643421 AAGCTCTCCCAATTCATAGTGAT 57.357 39.130 0.00 0.00 0.00 3.06
689 691 6.100279 ACATAAGCTCTCCCAATTCATAGTGA 59.900 38.462 0.00 0.00 0.00 3.41
690 692 6.204301 CACATAAGCTCTCCCAATTCATAGTG 59.796 42.308 0.00 0.00 0.00 2.74
691 693 6.126652 ACACATAAGCTCTCCCAATTCATAGT 60.127 38.462 0.00 0.00 0.00 2.12
692 694 6.204301 CACACATAAGCTCTCCCAATTCATAG 59.796 42.308 0.00 0.00 0.00 2.23
693 695 6.057533 CACACATAAGCTCTCCCAATTCATA 58.942 40.000 0.00 0.00 0.00 2.15
694 696 4.885907 CACACATAAGCTCTCCCAATTCAT 59.114 41.667 0.00 0.00 0.00 2.57
695 697 4.019411 TCACACATAAGCTCTCCCAATTCA 60.019 41.667 0.00 0.00 0.00 2.57
696 698 4.517285 TCACACATAAGCTCTCCCAATTC 58.483 43.478 0.00 0.00 0.00 2.17
697 699 4.574674 TCACACATAAGCTCTCCCAATT 57.425 40.909 0.00 0.00 0.00 2.32
698 700 4.164796 TGATCACACATAAGCTCTCCCAAT 59.835 41.667 0.00 0.00 0.00 3.16
699 701 3.519107 TGATCACACATAAGCTCTCCCAA 59.481 43.478 0.00 0.00 0.00 4.12
700 702 3.106827 TGATCACACATAAGCTCTCCCA 58.893 45.455 0.00 0.00 0.00 4.37
701 703 3.827008 TGATCACACATAAGCTCTCCC 57.173 47.619 0.00 0.00 0.00 4.30
702 704 3.497640 GCATGATCACACATAAGCTCTCC 59.502 47.826 0.00 0.00 0.00 3.71
703 705 3.497640 GGCATGATCACACATAAGCTCTC 59.502 47.826 0.00 0.00 0.00 3.20
704 706 3.136077 AGGCATGATCACACATAAGCTCT 59.864 43.478 0.00 0.00 0.00 4.09
705 707 3.474600 AGGCATGATCACACATAAGCTC 58.525 45.455 0.00 0.00 0.00 4.09
706 708 3.572632 AGGCATGATCACACATAAGCT 57.427 42.857 0.00 0.00 0.00 3.74
707 709 3.628942 TCAAGGCATGATCACACATAAGC 59.371 43.478 0.00 0.00 31.50 3.09
708 710 5.121105 TCTCAAGGCATGATCACACATAAG 58.879 41.667 0.00 0.00 37.44 1.73
709 711 5.101648 TCTCAAGGCATGATCACACATAA 57.898 39.130 0.00 0.00 37.44 1.90
710 712 4.406649 TCTCTCAAGGCATGATCACACATA 59.593 41.667 0.00 0.00 37.44 2.29
711 713 3.199289 TCTCTCAAGGCATGATCACACAT 59.801 43.478 0.00 0.00 37.44 3.21
712 714 2.568509 TCTCTCAAGGCATGATCACACA 59.431 45.455 0.00 0.00 37.44 3.72
713 715 3.257469 TCTCTCAAGGCATGATCACAC 57.743 47.619 0.00 0.00 37.44 3.82
714 716 3.986996 TTCTCTCAAGGCATGATCACA 57.013 42.857 0.00 0.00 37.44 3.58
715 717 4.005650 TGTTTCTCTCAAGGCATGATCAC 58.994 43.478 0.00 0.00 37.44 3.06
716 718 4.005650 GTGTTTCTCTCAAGGCATGATCA 58.994 43.478 0.00 0.00 37.44 2.92
717 719 3.063180 CGTGTTTCTCTCAAGGCATGATC 59.937 47.826 0.00 0.00 37.44 2.92
718 720 3.005554 CGTGTTTCTCTCAAGGCATGAT 58.994 45.455 0.00 0.00 37.44 2.45
719 721 2.037121 TCGTGTTTCTCTCAAGGCATGA 59.963 45.455 0.00 0.00 36.38 3.07
720 722 2.414481 CTCGTGTTTCTCTCAAGGCATG 59.586 50.000 0.00 0.00 0.00 4.06
721 723 2.300152 TCTCGTGTTTCTCTCAAGGCAT 59.700 45.455 0.00 0.00 0.00 4.40
722 724 1.686587 TCTCGTGTTTCTCTCAAGGCA 59.313 47.619 0.00 0.00 0.00 4.75
723 725 2.440539 TCTCGTGTTTCTCTCAAGGC 57.559 50.000 0.00 0.00 0.00 4.35
724 726 3.056536 TCCATCTCGTGTTTCTCTCAAGG 60.057 47.826 0.00 0.00 0.00 3.61
725 727 4.172505 CTCCATCTCGTGTTTCTCTCAAG 58.827 47.826 0.00 0.00 0.00 3.02
726 728 3.615110 GCTCCATCTCGTGTTTCTCTCAA 60.615 47.826 0.00 0.00 0.00 3.02
727 729 2.094494 GCTCCATCTCGTGTTTCTCTCA 60.094 50.000 0.00 0.00 0.00 3.27
728 730 2.165437 AGCTCCATCTCGTGTTTCTCTC 59.835 50.000 0.00 0.00 0.00 3.20
729 731 2.094286 CAGCTCCATCTCGTGTTTCTCT 60.094 50.000 0.00 0.00 0.00 3.10
730 732 2.266554 CAGCTCCATCTCGTGTTTCTC 58.733 52.381 0.00 0.00 0.00 2.87
731 733 1.066573 CCAGCTCCATCTCGTGTTTCT 60.067 52.381 0.00 0.00 0.00 2.52
732 734 1.066858 TCCAGCTCCATCTCGTGTTTC 60.067 52.381 0.00 0.00 0.00 2.78
733 735 0.976641 TCCAGCTCCATCTCGTGTTT 59.023 50.000 0.00 0.00 0.00 2.83
736 738 1.227205 GCTCCAGCTCCATCTCGTG 60.227 63.158 0.00 0.00 38.21 4.35
770 772 5.043903 TGCTACTTCGATTCTATGTTGCTC 58.956 41.667 10.21 0.00 32.44 4.26
779 781 4.537135 TCACCTTTGCTACTTCGATTCT 57.463 40.909 0.00 0.00 0.00 2.40
964 969 2.703007 CCTCCTCGATCCTTGATCCTTT 59.297 50.000 0.00 0.00 35.83 3.11
1075 1080 0.744281 CTCTCCTTCTTCTCCGCCTC 59.256 60.000 0.00 0.00 0.00 4.70
2416 2831 0.246360 CGTGGGTGCAGACAGTCATA 59.754 55.000 2.66 0.00 0.00 2.15
2907 3365 4.184629 CTGCTGTATTTGAGTAGACCACC 58.815 47.826 0.00 0.00 0.00 4.61
3037 3495 5.888161 GGAAGGAGGAGCATCAAAATAGAAA 59.112 40.000 0.00 0.00 36.25 2.52
3214 3672 6.121590 ACAACCTATCATGTGAATGCATGTA 58.878 36.000 0.00 0.00 44.68 2.29
3249 3732 8.390354 CAGTGACACGAAATCAATAATACATGT 58.610 33.333 2.69 2.69 0.00 3.21
3254 3737 5.295787 GGCCAGTGACACGAAATCAATAATA 59.704 40.000 0.00 0.00 0.00 0.98
3274 3757 2.335316 AACTGTGTAGAAAACGGCCA 57.665 45.000 2.24 0.00 0.00 5.36
3341 3824 2.159627 CGCTATGTGGAAACAACAGGTC 59.840 50.000 0.00 0.00 46.06 3.85
3342 3825 2.151202 CGCTATGTGGAAACAACAGGT 58.849 47.619 0.00 0.00 46.06 4.00
3393 3876 1.227999 ATTAATGGGCGACGGCGATG 61.228 55.000 18.90 6.30 41.24 3.84


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.