Multiple sequence alignment - TraesCS7B01G304200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G304200 chr7B 100.000 3588 0 0 1 3588 544910423 544914010 0.000000e+00 6626.0
1 TraesCS7B01G304200 chr7B 93.035 201 13 1 359 558 138473542 138473742 3.500000e-75 292.0
2 TraesCS7B01G304200 chr7D 96.581 2983 69 13 560 3539 514074093 514077045 0.000000e+00 4913.0
3 TraesCS7B01G304200 chr7D 73.592 515 99 26 2691 3182 29257218 29257718 2.870000e-36 163.0
4 TraesCS7B01G304200 chr7D 96.226 53 2 0 3535 3587 460499490 460499438 1.770000e-13 87.9
5 TraesCS7B01G304200 chr7A 95.446 2218 83 8 573 2785 587364206 587366410 0.000000e+00 3520.0
6 TraesCS7B01G304200 chr7A 95.407 762 35 0 2777 3538 587367721 587368482 0.000000e+00 1214.0
7 TraesCS7B01G304200 chr7A 72.696 586 111 34 2691 3250 6856973 6857535 2.230000e-32 150.0
8 TraesCS7B01G304200 chr7A 88.095 84 10 0 3066 3149 375911748 375911831 2.280000e-17 100.0
9 TraesCS7B01G304200 chr3A 96.176 340 10 3 1 338 522043876 522044214 1.460000e-153 553.0
10 TraesCS7B01G304200 chr3A 96.131 336 11 2 1 335 676073673 676074007 6.770000e-152 547.0
11 TraesCS7B01G304200 chr3A 93.000 200 14 0 359 558 636738544 636738345 3.500000e-75 292.0
12 TraesCS7B01G304200 chr3A 98.000 50 1 0 3538 3587 618920527 618920478 1.770000e-13 87.9
13 TraesCS7B01G304200 chr3A 98.000 50 1 0 3538 3587 618958136 618958087 1.770000e-13 87.9
14 TraesCS7B01G304200 chr3A 98.000 50 1 0 3538 3587 618995746 618995697 1.770000e-13 87.9
15 TraesCS7B01G304200 chr5A 95.601 341 11 4 1 338 57372718 57372379 8.760000e-151 544.0
16 TraesCS7B01G304200 chr5A 73.299 588 109 30 2691 3252 680270865 680271430 4.760000e-39 172.0
17 TraesCS7B01G304200 chr5A 70.875 594 123 33 2693 3253 546102075 546102651 3.810000e-15 93.5
18 TraesCS7B01G304200 chr5A 94.340 53 3 0 3535 3587 382307022 382306970 8.260000e-12 82.4
19 TraesCS7B01G304200 chr6B 95.846 337 11 3 1 335 165072246 165072581 3.150000e-150 542.0
20 TraesCS7B01G304200 chr6B 95.588 340 12 3 1 338 589922514 589922176 3.150000e-150 542.0
21 TraesCS7B01G304200 chr6B 93.467 199 13 0 360 558 45873394 45873196 2.710000e-76 296.0
22 TraesCS7B01G304200 chr4A 95.072 345 16 1 1 344 744302758 744302414 3.150000e-150 542.0
23 TraesCS7B01G304200 chr4A 91.707 205 16 1 358 561 709889580 709889784 2.110000e-72 283.0
24 TraesCS7B01G304200 chr4A 92.000 200 16 0 359 558 662590552 662590751 7.580000e-72 281.0
25 TraesCS7B01G304200 chr2B 94.813 347 12 6 1 345 640687476 640687134 1.470000e-148 536.0
26 TraesCS7B01G304200 chr2A 94.798 346 14 3 1 345 157450483 157450141 1.470000e-148 536.0
27 TraesCS7B01G304200 chr2A 98.000 50 1 0 3538 3587 576747154 576747203 1.770000e-13 87.9
28 TraesCS7B01G304200 chr3B 94.253 348 15 3 1 346 547818724 547819068 8.820000e-146 527.0
29 TraesCS7B01G304200 chr5B 94.000 200 12 0 359 558 127545879 127545680 1.620000e-78 303.0
30 TraesCS7B01G304200 chr5B 78.469 209 41 4 1864 2070 654366560 654366766 2.250000e-27 134.0
31 TraesCS7B01G304200 chr5B 94.643 56 1 2 3532 3587 491223634 491223581 6.380000e-13 86.1
32 TraesCS7B01G304200 chr3D 92.929 198 14 0 361 558 252197449 252197646 4.530000e-74 289.0
33 TraesCS7B01G304200 chr1D 92.500 200 15 0 359 558 195447108 195446909 1.630000e-73 287.0
34 TraesCS7B01G304200 chr1D 92.424 198 15 0 361 558 31491304 31491107 2.110000e-72 283.0
35 TraesCS7B01G304200 chr5D 75.141 531 109 21 2901 3421 250584860 250584343 1.000000e-55 228.0
36 TraesCS7B01G304200 chr5D 76.173 277 58 6 1864 2136 519545937 519546209 4.830000e-29 139.0
37 TraesCS7B01G304200 chr1A 79.736 227 36 8 3033 3255 481706019 481706239 4.800000e-34 156.0
38 TraesCS7B01G304200 chr1A 96.078 51 2 0 3538 3588 340017579 340017529 2.300000e-12 84.2
39 TraesCS7B01G304200 chr4D 74.167 360 61 21 3048 3390 423878779 423878435 1.750000e-23 121.0
40 TraesCS7B01G304200 chr6D 74.368 277 53 15 1863 2130 127379947 127379680 6.340000e-18 102.0
41 TraesCS7B01G304200 chr6A 82.456 114 18 2 3081 3194 447347127 447347016 8.200000e-17 99.0
42 TraesCS7B01G304200 chr6A 98.000 50 1 0 3538 3587 404465620 404465571 1.770000e-13 87.9
43 TraesCS7B01G304200 chr4B 80.808 99 15 4 3133 3231 671835372 671835278 1.380000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G304200 chr7B 544910423 544914010 3587 False 6626 6626 100.0000 1 3588 1 chr7B.!!$F2 3587
1 TraesCS7B01G304200 chr7D 514074093 514077045 2952 False 4913 4913 96.5810 560 3539 1 chr7D.!!$F2 2979
2 TraesCS7B01G304200 chr7A 587364206 587368482 4276 False 2367 3520 95.4265 573 3538 2 chr7A.!!$F3 2965
3 TraesCS7B01G304200 chr5D 250584343 250584860 517 True 228 228 75.1410 2901 3421 1 chr5D.!!$R1 520

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
318 319 0.033642 TGCAAATGCCCACATGTGTG 59.966 50.0 23.79 14.60 42.66 3.82 F
453 454 0.039256 TGCTTGCCAATTCTCGTTGC 60.039 50.0 0.00 0.00 0.00 4.17 F
1206 1207 0.107410 TTATGGACTTCGGCGCCATT 60.107 50.0 28.98 6.51 42.19 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1409 1413 1.078497 CATGTAGCCCTTGCACGGA 60.078 57.895 11.54 0.0 41.13 4.69 R
1655 1659 1.203523 CCGAGCAGCTCAGTTAAGACT 59.796 52.381 22.49 0.0 36.25 3.24 R
2753 2759 1.021390 CCAGGTAAGTGCTTGCTCGG 61.021 60.000 0.51 0.0 0.00 4.63 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 9.624697 TTGTCATGATCTACAAACTAAAATTGC 57.375 29.630 0.00 0.00 32.86 3.56
32 33 8.243426 TGTCATGATCTACAAACTAAAATTGCC 58.757 33.333 0.00 0.00 0.00 4.52
33 34 8.243426 GTCATGATCTACAAACTAAAATTGCCA 58.757 33.333 0.00 0.00 0.00 4.92
34 35 8.243426 TCATGATCTACAAACTAAAATTGCCAC 58.757 33.333 0.00 0.00 0.00 5.01
35 36 7.517614 TGATCTACAAACTAAAATTGCCACA 57.482 32.000 0.00 0.00 0.00 4.17
36 37 8.121305 TGATCTACAAACTAAAATTGCCACAT 57.879 30.769 0.00 0.00 0.00 3.21
37 38 8.028354 TGATCTACAAACTAAAATTGCCACATG 58.972 33.333 0.00 0.00 0.00 3.21
38 39 6.686630 TCTACAAACTAAAATTGCCACATGG 58.313 36.000 0.00 0.00 38.53 3.66
54 55 4.923281 CCACATGGCAACTTTAGTTTAAGC 59.077 41.667 0.00 0.00 35.83 3.09
55 56 4.923281 CACATGGCAACTTTAGTTTAAGCC 59.077 41.667 12.91 12.91 41.94 4.35
56 57 4.021456 ACATGGCAACTTTAGTTTAAGCCC 60.021 41.667 15.69 4.15 41.31 5.19
57 58 3.839778 TGGCAACTTTAGTTTAAGCCCT 58.160 40.909 15.69 0.00 41.31 5.19
58 59 4.988029 TGGCAACTTTAGTTTAAGCCCTA 58.012 39.130 15.69 1.20 41.31 3.53
59 60 5.576128 TGGCAACTTTAGTTTAAGCCCTAT 58.424 37.500 15.69 0.00 41.31 2.57
60 61 5.417580 TGGCAACTTTAGTTTAAGCCCTATG 59.582 40.000 15.69 0.00 41.31 2.23
61 62 5.163550 GGCAACTTTAGTTTAAGCCCTATGG 60.164 44.000 9.98 0.00 38.15 2.74
72 73 2.485677 CCCTATGGCAACTGCAGTG 58.514 57.895 22.49 15.42 44.36 3.66
73 74 0.322816 CCCTATGGCAACTGCAGTGT 60.323 55.000 22.49 7.95 44.36 3.55
74 75 1.065491 CCCTATGGCAACTGCAGTGTA 60.065 52.381 22.49 7.59 44.36 2.90
75 76 2.617788 CCCTATGGCAACTGCAGTGTAA 60.618 50.000 22.49 7.20 44.36 2.41
76 77 3.081061 CCTATGGCAACTGCAGTGTAAA 58.919 45.455 22.49 7.60 44.36 2.01
77 78 3.119849 CCTATGGCAACTGCAGTGTAAAC 60.120 47.826 22.49 10.01 44.36 2.01
78 79 1.756430 TGGCAACTGCAGTGTAAACA 58.244 45.000 22.49 12.56 44.36 2.83
79 80 2.305928 TGGCAACTGCAGTGTAAACAT 58.694 42.857 22.49 0.00 44.36 2.71
80 81 2.692557 TGGCAACTGCAGTGTAAACATT 59.307 40.909 22.49 0.00 44.36 2.71
81 82 3.052036 GGCAACTGCAGTGTAAACATTG 58.948 45.455 22.49 13.25 44.36 2.82
82 83 3.490761 GGCAACTGCAGTGTAAACATTGT 60.491 43.478 22.49 0.00 44.36 2.71
83 84 3.486841 GCAACTGCAGTGTAAACATTGTG 59.513 43.478 22.49 11.72 41.59 3.33
84 85 3.988379 ACTGCAGTGTAAACATTGTGG 57.012 42.857 20.97 3.85 36.18 4.17
85 86 2.034558 ACTGCAGTGTAAACATTGTGGC 59.965 45.455 20.97 0.00 36.18 5.01
86 87 2.027385 TGCAGTGTAAACATTGTGGCA 58.973 42.857 7.35 0.00 36.18 4.92
87 88 2.428530 TGCAGTGTAAACATTGTGGCAA 59.571 40.909 7.35 0.00 36.18 4.52
88 89 2.794350 GCAGTGTAAACATTGTGGCAAC 59.206 45.455 7.35 0.00 36.18 4.17
89 90 3.490761 GCAGTGTAAACATTGTGGCAACT 60.491 43.478 7.35 0.00 36.18 3.16
90 91 4.681744 CAGTGTAAACATTGTGGCAACTT 58.318 39.130 0.00 0.00 37.61 2.66
91 92 4.739716 CAGTGTAAACATTGTGGCAACTTC 59.260 41.667 0.00 0.00 37.61 3.01
92 93 4.644685 AGTGTAAACATTGTGGCAACTTCT 59.355 37.500 0.00 0.00 37.61 2.85
93 94 4.739716 GTGTAAACATTGTGGCAACTTCTG 59.260 41.667 0.00 0.00 37.61 3.02
94 95 3.457610 AAACATTGTGGCAACTTCTGG 57.542 42.857 0.00 0.00 37.61 3.86
124 125 8.964420 AAAAATTCGTCGAAACATATCAACAT 57.036 26.923 12.40 0.00 0.00 2.71
125 126 7.953305 AAATTCGTCGAAACATATCAACATG 57.047 32.000 12.40 0.00 0.00 3.21
126 127 5.463499 TTCGTCGAAACATATCAACATGG 57.537 39.130 4.91 0.00 0.00 3.66
127 128 3.868661 TCGTCGAAACATATCAACATGGG 59.131 43.478 0.00 0.00 0.00 4.00
128 129 3.002246 CGTCGAAACATATCAACATGGGG 59.998 47.826 0.00 0.00 0.00 4.96
129 130 3.945285 GTCGAAACATATCAACATGGGGT 59.055 43.478 0.00 0.00 0.00 4.95
130 131 4.035208 GTCGAAACATATCAACATGGGGTC 59.965 45.833 0.00 0.00 0.00 4.46
131 132 4.080582 TCGAAACATATCAACATGGGGTCT 60.081 41.667 0.00 0.00 0.00 3.85
132 133 5.129650 TCGAAACATATCAACATGGGGTCTA 59.870 40.000 0.00 0.00 0.00 2.59
133 134 5.466728 CGAAACATATCAACATGGGGTCTAG 59.533 44.000 0.00 0.00 0.00 2.43
134 135 5.975988 AACATATCAACATGGGGTCTAGT 57.024 39.130 0.00 0.00 0.00 2.57
135 136 5.975988 ACATATCAACATGGGGTCTAGTT 57.024 39.130 0.00 0.00 0.00 2.24
136 137 6.327386 ACATATCAACATGGGGTCTAGTTT 57.673 37.500 0.00 0.00 0.00 2.66
137 138 6.731467 ACATATCAACATGGGGTCTAGTTTT 58.269 36.000 0.00 0.00 0.00 2.43
138 139 6.603201 ACATATCAACATGGGGTCTAGTTTTG 59.397 38.462 0.00 0.00 0.00 2.44
139 140 4.715534 TCAACATGGGGTCTAGTTTTGA 57.284 40.909 0.00 0.00 0.00 2.69
140 141 5.055265 TCAACATGGGGTCTAGTTTTGAA 57.945 39.130 0.00 0.00 0.00 2.69
141 142 5.070001 TCAACATGGGGTCTAGTTTTGAAG 58.930 41.667 0.00 0.00 0.00 3.02
142 143 4.993705 ACATGGGGTCTAGTTTTGAAGA 57.006 40.909 0.00 0.00 0.00 2.87
143 144 5.520748 ACATGGGGTCTAGTTTTGAAGAT 57.479 39.130 0.00 0.00 0.00 2.40
144 145 5.501156 ACATGGGGTCTAGTTTTGAAGATC 58.499 41.667 0.00 0.00 0.00 2.75
145 146 5.251700 ACATGGGGTCTAGTTTTGAAGATCT 59.748 40.000 0.00 0.00 0.00 2.75
146 147 5.422214 TGGGGTCTAGTTTTGAAGATCTC 57.578 43.478 0.00 0.00 0.00 2.75
147 148 4.081642 TGGGGTCTAGTTTTGAAGATCTCG 60.082 45.833 0.00 0.00 0.00 4.04
148 149 4.081586 GGGGTCTAGTTTTGAAGATCTCGT 60.082 45.833 0.00 0.00 0.00 4.18
149 150 5.103687 GGGTCTAGTTTTGAAGATCTCGTC 58.896 45.833 0.00 0.00 0.00 4.20
150 151 4.794246 GGTCTAGTTTTGAAGATCTCGTCG 59.206 45.833 0.00 0.00 0.00 5.12
151 152 5.391736 GGTCTAGTTTTGAAGATCTCGTCGA 60.392 44.000 0.00 0.00 0.00 4.20
152 153 5.735427 GTCTAGTTTTGAAGATCTCGTCGAG 59.265 44.000 16.33 16.33 0.00 4.04
153 154 4.768130 AGTTTTGAAGATCTCGTCGAGA 57.232 40.909 26.15 26.15 43.20 4.04
154 155 4.477780 AGTTTTGAAGATCTCGTCGAGAC 58.522 43.478 26.46 18.95 41.76 3.36
168 169 3.777478 GTCGAGACGGATTTAATGGTGA 58.223 45.455 0.00 0.00 0.00 4.02
169 170 4.178540 GTCGAGACGGATTTAATGGTGAA 58.821 43.478 0.00 0.00 0.00 3.18
170 171 4.628333 GTCGAGACGGATTTAATGGTGAAA 59.372 41.667 0.00 0.00 0.00 2.69
171 172 5.121142 GTCGAGACGGATTTAATGGTGAAAA 59.879 40.000 0.00 0.00 0.00 2.29
172 173 5.121142 TCGAGACGGATTTAATGGTGAAAAC 59.879 40.000 0.00 0.00 0.00 2.43
173 174 5.291293 AGACGGATTTAATGGTGAAAACG 57.709 39.130 0.00 0.00 0.00 3.60
174 175 4.155280 AGACGGATTTAATGGTGAAAACGG 59.845 41.667 0.00 0.00 0.00 4.44
175 176 4.073549 ACGGATTTAATGGTGAAAACGGA 58.926 39.130 0.00 0.00 0.00 4.69
176 177 4.703093 ACGGATTTAATGGTGAAAACGGAT 59.297 37.500 0.00 0.00 0.00 4.18
177 178 5.184287 ACGGATTTAATGGTGAAAACGGATT 59.816 36.000 0.00 0.00 0.00 3.01
178 179 6.096695 CGGATTTAATGGTGAAAACGGATTT 58.903 36.000 0.00 0.00 0.00 2.17
179 180 6.588373 CGGATTTAATGGTGAAAACGGATTTT 59.412 34.615 0.00 0.00 40.83 1.82
180 181 7.117092 CGGATTTAATGGTGAAAACGGATTTTT 59.883 33.333 0.00 0.00 38.17 1.94
181 182 9.425577 GGATTTAATGGTGAAAACGGATTTTTA 57.574 29.630 0.00 0.00 38.17 1.52
183 184 9.990360 ATTTAATGGTGAAAACGGATTTTTAGT 57.010 25.926 0.00 0.00 38.17 2.24
184 185 9.819267 TTTAATGGTGAAAACGGATTTTTAGTT 57.181 25.926 0.00 0.00 38.17 2.24
185 186 7.940178 AATGGTGAAAACGGATTTTTAGTTC 57.060 32.000 0.00 0.00 38.17 3.01
186 187 6.452494 TGGTGAAAACGGATTTTTAGTTCA 57.548 33.333 0.00 0.00 38.17 3.18
187 188 6.267070 TGGTGAAAACGGATTTTTAGTTCAC 58.733 36.000 0.00 0.00 38.17 3.18
188 189 6.095720 TGGTGAAAACGGATTTTTAGTTCACT 59.904 34.615 11.96 0.00 38.17 3.41
189 190 6.976349 GGTGAAAACGGATTTTTAGTTCACTT 59.024 34.615 11.96 0.00 38.17 3.16
190 191 7.490079 GGTGAAAACGGATTTTTAGTTCACTTT 59.510 33.333 11.96 0.00 38.17 2.66
191 192 8.865978 GTGAAAACGGATTTTTAGTTCACTTTT 58.134 29.630 6.42 0.00 38.17 2.27
192 193 9.425577 TGAAAACGGATTTTTAGTTCACTTTTT 57.574 25.926 0.00 0.00 38.17 1.94
262 263 8.622948 TCTACTGATGTCATCTATTCATACGT 57.377 34.615 13.90 0.00 0.00 3.57
263 264 8.507249 TCTACTGATGTCATCTATTCATACGTG 58.493 37.037 13.90 0.00 0.00 4.49
264 265 6.450545 ACTGATGTCATCTATTCATACGTGG 58.549 40.000 13.90 0.00 0.00 4.94
265 266 5.230182 TGATGTCATCTATTCATACGTGGC 58.770 41.667 13.90 0.00 0.00 5.01
266 267 4.664150 TGTCATCTATTCATACGTGGCA 57.336 40.909 0.00 0.00 0.00 4.92
267 268 5.017294 TGTCATCTATTCATACGTGGCAA 57.983 39.130 0.00 0.00 0.00 4.52
268 269 5.423886 TGTCATCTATTCATACGTGGCAAA 58.576 37.500 0.00 0.00 0.00 3.68
269 270 5.877564 TGTCATCTATTCATACGTGGCAAAA 59.122 36.000 0.00 0.00 0.00 2.44
270 271 6.542005 TGTCATCTATTCATACGTGGCAAAAT 59.458 34.615 0.00 0.00 0.00 1.82
271 272 6.852853 GTCATCTATTCATACGTGGCAAAATG 59.147 38.462 0.00 0.00 0.00 2.32
272 273 6.765512 TCATCTATTCATACGTGGCAAAATGA 59.234 34.615 0.00 0.00 0.00 2.57
273 274 6.603237 TCTATTCATACGTGGCAAAATGAG 57.397 37.500 0.00 0.00 30.53 2.90
274 275 6.112734 TCTATTCATACGTGGCAAAATGAGT 58.887 36.000 0.00 0.00 30.53 3.41
275 276 4.418013 TTCATACGTGGCAAAATGAGTG 57.582 40.909 0.00 0.00 30.53 3.51
276 277 2.746904 TCATACGTGGCAAAATGAGTGG 59.253 45.455 0.00 0.00 0.00 4.00
277 278 2.264005 TACGTGGCAAAATGAGTGGT 57.736 45.000 0.00 0.00 0.00 4.16
278 279 0.667993 ACGTGGCAAAATGAGTGGTG 59.332 50.000 0.00 0.00 0.00 4.17
279 280 0.950836 CGTGGCAAAATGAGTGGTGA 59.049 50.000 0.00 0.00 0.00 4.02
280 281 1.541147 CGTGGCAAAATGAGTGGTGAT 59.459 47.619 0.00 0.00 0.00 3.06
281 282 2.669113 CGTGGCAAAATGAGTGGTGATG 60.669 50.000 0.00 0.00 0.00 3.07
282 283 1.894466 TGGCAAAATGAGTGGTGATGG 59.106 47.619 0.00 0.00 0.00 3.51
283 284 2.170166 GGCAAAATGAGTGGTGATGGA 58.830 47.619 0.00 0.00 0.00 3.41
284 285 2.165030 GGCAAAATGAGTGGTGATGGAG 59.835 50.000 0.00 0.00 0.00 3.86
285 286 2.165030 GCAAAATGAGTGGTGATGGAGG 59.835 50.000 0.00 0.00 0.00 4.30
286 287 2.134789 AAATGAGTGGTGATGGAGGC 57.865 50.000 0.00 0.00 0.00 4.70
287 288 0.107508 AATGAGTGGTGATGGAGGCG 60.108 55.000 0.00 0.00 0.00 5.52
288 289 1.267574 ATGAGTGGTGATGGAGGCGT 61.268 55.000 0.00 0.00 0.00 5.68
289 290 1.448540 GAGTGGTGATGGAGGCGTG 60.449 63.158 0.00 0.00 0.00 5.34
290 291 2.172483 GAGTGGTGATGGAGGCGTGT 62.172 60.000 0.00 0.00 0.00 4.49
291 292 2.034879 GTGGTGATGGAGGCGTGTG 61.035 63.158 0.00 0.00 0.00 3.82
292 293 2.436646 GGTGATGGAGGCGTGTGG 60.437 66.667 0.00 0.00 0.00 4.17
293 294 2.436646 GTGATGGAGGCGTGTGGG 60.437 66.667 0.00 0.00 0.00 4.61
294 295 4.408821 TGATGGAGGCGTGTGGGC 62.409 66.667 0.00 0.00 42.69 5.36
310 311 3.199551 GCGATCTGCAAATGCCCA 58.800 55.556 2.46 0.00 45.45 5.36
311 312 1.226773 GCGATCTGCAAATGCCCAC 60.227 57.895 2.46 0.00 45.45 4.61
312 313 1.936436 GCGATCTGCAAATGCCCACA 61.936 55.000 2.46 0.00 45.45 4.17
313 314 0.742505 CGATCTGCAAATGCCCACAT 59.257 50.000 2.46 0.00 41.18 3.21
314 315 1.535226 CGATCTGCAAATGCCCACATG 60.535 52.381 2.46 0.00 41.18 3.21
315 316 1.479323 GATCTGCAAATGCCCACATGT 59.521 47.619 2.46 0.00 41.18 3.21
316 317 0.604073 TCTGCAAATGCCCACATGTG 59.396 50.000 19.31 19.31 43.44 3.21
317 318 0.319083 CTGCAAATGCCCACATGTGT 59.681 50.000 23.79 2.81 42.66 3.72
318 319 0.033642 TGCAAATGCCCACATGTGTG 59.966 50.000 23.79 14.60 42.66 3.82
326 327 3.743208 CACATGTGTGGGCGTTCA 58.257 55.556 18.03 0.00 42.10 3.18
327 328 1.282570 CACATGTGTGGGCGTTCAC 59.717 57.895 18.03 3.83 42.10 3.18
328 329 1.153066 ACATGTGTGGGCGTTCACA 60.153 52.632 0.00 8.49 46.23 3.58
333 334 2.336341 TGTGGGCGTTCACATTTCC 58.664 52.632 8.49 0.00 42.05 3.13
334 335 1.209127 GTGGGCGTTCACATTTCCG 59.791 57.895 5.60 0.00 37.57 4.30
335 336 1.071642 TGGGCGTTCACATTTCCGA 59.928 52.632 0.00 0.00 0.00 4.55
336 337 0.535328 TGGGCGTTCACATTTCCGAA 60.535 50.000 0.00 0.00 0.00 4.30
337 338 0.594110 GGGCGTTCACATTTCCGAAA 59.406 50.000 0.00 0.00 0.00 3.46
338 339 1.401018 GGGCGTTCACATTTCCGAAAG 60.401 52.381 0.00 0.00 0.00 2.62
339 340 1.533731 GGCGTTCACATTTCCGAAAGA 59.466 47.619 0.00 0.00 0.00 2.52
340 341 2.571206 GCGTTCACATTTCCGAAAGAC 58.429 47.619 0.00 0.00 0.00 3.01
341 342 2.032377 GCGTTCACATTTCCGAAAGACA 60.032 45.455 0.00 0.00 0.00 3.41
342 343 3.547214 GCGTTCACATTTCCGAAAGACAA 60.547 43.478 0.00 0.00 0.00 3.18
343 344 4.593157 CGTTCACATTTCCGAAAGACAAA 58.407 39.130 0.00 0.00 0.00 2.83
344 345 5.031578 CGTTCACATTTCCGAAAGACAAAA 58.968 37.500 0.00 0.00 0.00 2.44
345 346 5.513495 CGTTCACATTTCCGAAAGACAAAAA 59.487 36.000 0.00 0.00 0.00 1.94
346 347 6.505732 CGTTCACATTTCCGAAAGACAAAAAC 60.506 38.462 0.00 0.00 0.00 2.43
347 348 5.955488 TCACATTTCCGAAAGACAAAAACA 58.045 33.333 0.00 0.00 0.00 2.83
348 349 6.390721 TCACATTTCCGAAAGACAAAAACAA 58.609 32.000 0.00 0.00 0.00 2.83
349 350 6.868864 TCACATTTCCGAAAGACAAAAACAAA 59.131 30.769 0.00 0.00 0.00 2.83
350 351 6.953189 CACATTTCCGAAAGACAAAAACAAAC 59.047 34.615 0.00 0.00 0.00 2.93
351 352 6.091577 ACATTTCCGAAAGACAAAAACAAACC 59.908 34.615 0.00 0.00 0.00 3.27
352 353 3.760537 TCCGAAAGACAAAAACAAACCG 58.239 40.909 0.00 0.00 0.00 4.44
353 354 3.439476 TCCGAAAGACAAAAACAAACCGA 59.561 39.130 0.00 0.00 0.00 4.69
354 355 4.082895 TCCGAAAGACAAAAACAAACCGAA 60.083 37.500 0.00 0.00 0.00 4.30
355 356 4.621886 CCGAAAGACAAAAACAAACCGAAA 59.378 37.500 0.00 0.00 0.00 3.46
356 357 5.118817 CCGAAAGACAAAAACAAACCGAAAA 59.881 36.000 0.00 0.00 0.00 2.29
357 358 6.230654 CGAAAGACAAAAACAAACCGAAAAG 58.769 36.000 0.00 0.00 0.00 2.27
358 359 6.129035 CGAAAGACAAAAACAAACCGAAAAGT 60.129 34.615 0.00 0.00 0.00 2.66
359 360 7.060864 CGAAAGACAAAAACAAACCGAAAAGTA 59.939 33.333 0.00 0.00 0.00 2.24
360 361 7.806149 AAGACAAAAACAAACCGAAAAGTAG 57.194 32.000 0.00 0.00 0.00 2.57
361 362 7.148355 AGACAAAAACAAACCGAAAAGTAGA 57.852 32.000 0.00 0.00 0.00 2.59
362 363 7.248437 AGACAAAAACAAACCGAAAAGTAGAG 58.752 34.615 0.00 0.00 0.00 2.43
363 364 5.803461 ACAAAAACAAACCGAAAAGTAGAGC 59.197 36.000 0.00 0.00 0.00 4.09
364 365 5.570234 AAAACAAACCGAAAAGTAGAGCA 57.430 34.783 0.00 0.00 0.00 4.26
365 366 5.767816 AAACAAACCGAAAAGTAGAGCAT 57.232 34.783 0.00 0.00 0.00 3.79
366 367 6.870971 AAACAAACCGAAAAGTAGAGCATA 57.129 33.333 0.00 0.00 0.00 3.14
367 368 6.870971 AACAAACCGAAAAGTAGAGCATAA 57.129 33.333 0.00 0.00 0.00 1.90
368 369 7.448748 AACAAACCGAAAAGTAGAGCATAAT 57.551 32.000 0.00 0.00 0.00 1.28
369 370 7.448748 ACAAACCGAAAAGTAGAGCATAATT 57.551 32.000 0.00 0.00 0.00 1.40
370 371 7.305474 ACAAACCGAAAAGTAGAGCATAATTG 58.695 34.615 0.00 0.00 0.00 2.32
371 372 6.436843 AACCGAAAAGTAGAGCATAATTGG 57.563 37.500 0.00 0.00 0.00 3.16
372 373 5.497474 ACCGAAAAGTAGAGCATAATTGGT 58.503 37.500 0.00 0.00 35.95 3.67
373 374 5.944007 ACCGAAAAGTAGAGCATAATTGGTT 59.056 36.000 0.00 0.00 32.62 3.67
374 375 6.433093 ACCGAAAAGTAGAGCATAATTGGTTT 59.567 34.615 0.00 0.00 32.62 3.27
375 376 6.747280 CCGAAAAGTAGAGCATAATTGGTTTG 59.253 38.462 0.00 0.00 32.62 2.93
376 377 7.361713 CCGAAAAGTAGAGCATAATTGGTTTGA 60.362 37.037 0.00 0.00 32.62 2.69
377 378 8.184192 CGAAAAGTAGAGCATAATTGGTTTGAT 58.816 33.333 0.00 0.00 32.62 2.57
378 379 9.294030 GAAAAGTAGAGCATAATTGGTTTGATG 57.706 33.333 0.00 0.00 32.62 3.07
379 380 6.382869 AGTAGAGCATAATTGGTTTGATGC 57.617 37.500 1.15 1.15 44.05 3.91
380 381 4.660789 AGAGCATAATTGGTTTGATGCC 57.339 40.909 5.24 0.00 44.65 4.40
381 382 4.025360 AGAGCATAATTGGTTTGATGCCA 58.975 39.130 5.24 0.00 44.65 4.92
396 397 4.766970 CCAAAAATTGGCGTGCCA 57.233 50.000 10.06 10.06 45.17 4.92
422 423 3.799281 TGGCAACTGCTAAATATTGGC 57.201 42.857 1.06 2.72 45.18 4.52
423 424 3.364549 TGGCAACTGCTAAATATTGGCT 58.635 40.909 10.21 0.00 45.20 4.75
424 425 4.531854 TGGCAACTGCTAAATATTGGCTA 58.468 39.130 10.21 0.00 45.20 3.93
425 426 4.952957 TGGCAACTGCTAAATATTGGCTAA 59.047 37.500 10.21 0.00 45.20 3.09
426 427 5.420421 TGGCAACTGCTAAATATTGGCTAAA 59.580 36.000 10.21 0.00 45.20 1.85
427 428 5.748630 GGCAACTGCTAAATATTGGCTAAAC 59.251 40.000 12.73 2.54 42.56 2.01
428 429 6.329496 GCAACTGCTAAATATTGGCTAAACA 58.671 36.000 12.73 0.00 38.08 2.83
429 430 6.980397 GCAACTGCTAAATATTGGCTAAACAT 59.020 34.615 12.73 0.00 38.08 2.71
430 431 7.492344 GCAACTGCTAAATATTGGCTAAACATT 59.508 33.333 12.73 0.00 38.08 2.71
431 432 8.810427 CAACTGCTAAATATTGGCTAAACATTG 58.190 33.333 12.73 6.53 38.08 2.82
432 433 7.491682 ACTGCTAAATATTGGCTAAACATTGG 58.508 34.615 12.73 0.00 38.08 3.16
433 434 7.124147 ACTGCTAAATATTGGCTAAACATTGGT 59.876 33.333 12.73 0.00 38.08 3.67
434 435 7.846066 TGCTAAATATTGGCTAAACATTGGTT 58.154 30.769 12.73 0.00 38.08 3.67
435 436 7.763528 TGCTAAATATTGGCTAAACATTGGTTG 59.236 33.333 12.73 0.00 36.27 3.77
436 437 6.983474 AAATATTGGCTAAACATTGGTTGC 57.017 33.333 0.00 0.00 37.30 4.17
437 438 5.937975 ATATTGGCTAAACATTGGTTGCT 57.062 34.783 0.00 0.00 37.30 3.91
438 439 4.622260 ATTGGCTAAACATTGGTTGCTT 57.378 36.364 0.00 0.00 37.30 3.91
439 440 3.383620 TGGCTAAACATTGGTTGCTTG 57.616 42.857 0.00 0.00 37.30 4.01
440 441 2.068519 GGCTAAACATTGGTTGCTTGC 58.931 47.619 0.00 0.00 37.30 4.01
441 442 2.068519 GCTAAACATTGGTTGCTTGCC 58.931 47.619 0.00 0.00 37.30 4.52
442 443 2.547642 GCTAAACATTGGTTGCTTGCCA 60.548 45.455 0.00 0.00 37.30 4.92
448 449 2.818130 TTGGTTGCTTGCCAATTCTC 57.182 45.000 3.67 0.00 40.69 2.87
449 450 0.597568 TGGTTGCTTGCCAATTCTCG 59.402 50.000 0.00 0.00 35.55 4.04
450 451 0.598065 GGTTGCTTGCCAATTCTCGT 59.402 50.000 0.00 0.00 35.55 4.18
451 452 1.000274 GGTTGCTTGCCAATTCTCGTT 60.000 47.619 0.00 0.00 35.55 3.85
452 453 2.053627 GTTGCTTGCCAATTCTCGTTG 58.946 47.619 0.00 0.00 35.55 4.10
453 454 0.039256 TGCTTGCCAATTCTCGTTGC 60.039 50.000 0.00 0.00 0.00 4.17
454 455 0.733909 GCTTGCCAATTCTCGTTGCC 60.734 55.000 0.00 0.00 0.00 4.52
455 456 0.597568 CTTGCCAATTCTCGTTGCCA 59.402 50.000 0.00 0.00 0.00 4.92
456 457 1.000385 CTTGCCAATTCTCGTTGCCAA 60.000 47.619 0.00 0.00 0.00 4.52
457 458 1.255882 TGCCAATTCTCGTTGCCAAT 58.744 45.000 0.00 0.00 0.00 3.16
458 459 1.202114 TGCCAATTCTCGTTGCCAATC 59.798 47.619 0.00 0.00 0.00 2.67
459 460 1.474077 GCCAATTCTCGTTGCCAATCT 59.526 47.619 0.00 0.00 0.00 2.40
460 461 2.478539 GCCAATTCTCGTTGCCAATCTC 60.479 50.000 0.00 0.00 0.00 2.75
461 462 2.749076 CCAATTCTCGTTGCCAATCTCA 59.251 45.455 0.00 0.00 0.00 3.27
462 463 3.426695 CCAATTCTCGTTGCCAATCTCAC 60.427 47.826 0.00 0.00 0.00 3.51
463 464 2.542020 TTCTCGTTGCCAATCTCACA 57.458 45.000 0.00 0.00 0.00 3.58
464 465 2.542020 TCTCGTTGCCAATCTCACAA 57.458 45.000 0.00 0.00 0.00 3.33
465 466 2.844946 TCTCGTTGCCAATCTCACAAA 58.155 42.857 0.00 0.00 0.00 2.83
466 467 3.210227 TCTCGTTGCCAATCTCACAAAA 58.790 40.909 0.00 0.00 0.00 2.44
467 468 3.629855 TCTCGTTGCCAATCTCACAAAAA 59.370 39.130 0.00 0.00 0.00 1.94
468 469 3.963665 TCGTTGCCAATCTCACAAAAAG 58.036 40.909 0.00 0.00 0.00 2.27
469 470 3.380004 TCGTTGCCAATCTCACAAAAAGT 59.620 39.130 0.00 0.00 0.00 2.66
470 471 4.111916 CGTTGCCAATCTCACAAAAAGTT 58.888 39.130 0.00 0.00 0.00 2.66
471 472 4.026640 CGTTGCCAATCTCACAAAAAGTTG 60.027 41.667 0.00 0.00 40.84 3.16
472 473 3.456280 TGCCAATCTCACAAAAAGTTGC 58.544 40.909 0.00 0.00 38.39 4.17
473 474 2.802247 GCCAATCTCACAAAAAGTTGCC 59.198 45.455 0.00 0.00 38.39 4.52
474 475 3.740764 GCCAATCTCACAAAAAGTTGCCA 60.741 43.478 0.00 0.00 38.39 4.92
475 476 4.440880 CCAATCTCACAAAAAGTTGCCAA 58.559 39.130 0.00 0.00 38.39 4.52
476 477 4.874966 CCAATCTCACAAAAAGTTGCCAAA 59.125 37.500 0.00 0.00 38.39 3.28
477 478 5.528320 CCAATCTCACAAAAAGTTGCCAAAT 59.472 36.000 0.00 0.00 38.39 2.32
478 479 6.705381 CCAATCTCACAAAAAGTTGCCAAATA 59.295 34.615 0.00 0.00 38.39 1.40
479 480 7.388500 CCAATCTCACAAAAAGTTGCCAAATAT 59.612 33.333 0.00 0.00 38.39 1.28
480 481 8.776470 CAATCTCACAAAAAGTTGCCAAATATT 58.224 29.630 0.00 0.00 38.39 1.28
481 482 7.712264 TCTCACAAAAAGTTGCCAAATATTG 57.288 32.000 0.00 2.90 38.39 1.90
496 497 7.910441 CCAAATATTGGCAACTTCTGATTTT 57.090 32.000 0.00 0.00 45.17 1.82
497 498 7.745015 CCAAATATTGGCAACTTCTGATTTTG 58.255 34.615 0.00 4.44 45.17 2.44
498 499 6.973229 AATATTGGCAACTTCTGATTTTGC 57.027 33.333 0.00 12.84 44.05 3.68
504 505 5.025986 GCAACTTCTGATTTTGCCAAATG 57.974 39.130 0.00 0.00 39.82 2.32
505 506 4.512571 GCAACTTCTGATTTTGCCAAATGT 59.487 37.500 0.00 0.00 39.82 2.71
506 507 5.007921 GCAACTTCTGATTTTGCCAAATGTT 59.992 36.000 0.00 0.00 39.82 2.71
507 508 6.423862 CAACTTCTGATTTTGCCAAATGTTG 58.576 36.000 0.00 5.05 32.35 3.33
523 524 8.545229 CCAAATGTTGGCTTGTCAAATATTAA 57.455 30.769 0.00 0.00 45.17 1.40
524 525 8.442384 CCAAATGTTGGCTTGTCAAATATTAAC 58.558 33.333 0.00 0.00 45.17 2.01
525 526 8.986847 CAAATGTTGGCTTGTCAAATATTAACA 58.013 29.630 0.00 0.00 0.00 2.41
526 527 9.553064 AAATGTTGGCTTGTCAAATATTAACAA 57.447 25.926 12.99 12.99 0.00 2.83
527 528 9.723601 AATGTTGGCTTGTCAAATATTAACAAT 57.276 25.926 13.68 0.00 32.85 2.71
528 529 8.531622 TGTTGGCTTGTCAAATATTAACAATG 57.468 30.769 13.68 10.34 32.85 2.82
529 530 7.117523 TGTTGGCTTGTCAAATATTAACAATGC 59.882 33.333 13.68 16.12 32.85 3.56
530 531 6.105333 TGGCTTGTCAAATATTAACAATGCC 58.895 36.000 26.05 26.05 41.86 4.40
531 532 6.105333 GGCTTGTCAAATATTAACAATGCCA 58.895 36.000 26.77 7.50 41.54 4.92
532 533 6.593382 GGCTTGTCAAATATTAACAATGCCAA 59.407 34.615 26.77 12.36 41.54 4.52
533 534 7.118971 GGCTTGTCAAATATTAACAATGCCAAA 59.881 33.333 26.77 8.87 41.54 3.28
534 535 8.667463 GCTTGTCAAATATTAACAATGCCAAAT 58.333 29.630 13.68 0.00 32.85 2.32
535 536 9.976255 CTTGTCAAATATTAACAATGCCAAATG 57.024 29.630 13.68 1.30 32.85 2.32
536 537 9.499479 TTGTCAAATATTAACAATGCCAAATGT 57.501 25.926 10.67 0.00 0.00 2.71
537 538 9.499479 TGTCAAATATTAACAATGCCAAATGTT 57.501 25.926 4.88 4.88 42.16 2.71
546 547 7.976135 AACAATGCCAAATGTTAATAGCAAA 57.024 28.000 0.00 0.00 37.96 3.68
547 548 7.363205 ACAATGCCAAATGTTAATAGCAAAC 57.637 32.000 0.00 0.00 33.35 2.93
548 549 6.371271 ACAATGCCAAATGTTAATAGCAAACC 59.629 34.615 0.00 0.00 33.35 3.27
549 550 5.474578 TGCCAAATGTTAATAGCAAACCA 57.525 34.783 0.00 0.00 0.00 3.67
550 551 5.858381 TGCCAAATGTTAATAGCAAACCAA 58.142 33.333 0.00 0.00 0.00 3.67
551 552 6.471146 TGCCAAATGTTAATAGCAAACCAAT 58.529 32.000 0.00 0.00 0.00 3.16
552 553 6.939163 TGCCAAATGTTAATAGCAAACCAATT 59.061 30.769 0.00 0.00 0.00 2.32
553 554 8.097038 TGCCAAATGTTAATAGCAAACCAATTA 58.903 29.630 0.00 0.00 0.00 1.40
554 555 9.108284 GCCAAATGTTAATAGCAAACCAATTAT 57.892 29.630 0.00 0.00 0.00 1.28
556 557 9.919348 CAAATGTTAATAGCAAACCAATTATGC 57.081 29.630 0.00 0.00 40.34 3.14
695 696 3.079578 CACCATCAGCAAGAACAGATGT 58.920 45.455 0.00 0.00 36.91 3.06
702 703 1.532868 GCAAGAACAGATGTTGACGCT 59.467 47.619 2.31 0.00 38.56 5.07
935 936 6.938030 ACACTTTCAAGAATACGTTATGGGAA 59.062 34.615 0.00 0.00 0.00 3.97
1103 1104 2.110011 TCCATAGGAGATCGGACATGGA 59.890 50.000 14.42 14.42 39.60 3.41
1206 1207 0.107410 TTATGGACTTCGGCGCCATT 60.107 50.000 28.98 6.51 42.19 3.16
1288 1289 1.401539 GCCACGAGGAATTTGCAAGTC 60.402 52.381 1.86 1.20 36.89 3.01
1295 1297 1.067354 GGAATTTGCAAGTCAGGGCTG 60.067 52.381 12.65 0.00 0.00 4.85
1650 1654 3.516615 GCTAATTTCTCGCTGTCTCACT 58.483 45.455 0.00 0.00 0.00 3.41
1651 1655 3.549873 GCTAATTTCTCGCTGTCTCACTC 59.450 47.826 0.00 0.00 0.00 3.51
1652 1656 3.951775 AATTTCTCGCTGTCTCACTCT 57.048 42.857 0.00 0.00 0.00 3.24
1653 1657 3.951775 ATTTCTCGCTGTCTCACTCTT 57.048 42.857 0.00 0.00 0.00 2.85
1654 1658 5.392767 AATTTCTCGCTGTCTCACTCTTA 57.607 39.130 0.00 0.00 0.00 2.10
1655 1659 4.848562 TTTCTCGCTGTCTCACTCTTAA 57.151 40.909 0.00 0.00 0.00 1.85
1656 1660 4.427096 TTCTCGCTGTCTCACTCTTAAG 57.573 45.455 0.00 0.00 0.00 1.85
1686 1690 3.120979 CTGCTCGGCCGACATCGTA 62.121 63.158 27.28 13.49 37.74 3.43
1718 1722 7.987750 AGAACTTCTCCTTAACCATTTCTTC 57.012 36.000 0.00 0.00 0.00 2.87
1735 1741 4.767255 CACTCTGCTCCGGCACCC 62.767 72.222 0.00 0.00 44.28 4.61
1814 1820 1.527311 GACAGCAAGTTCTTCCACGTC 59.473 52.381 0.00 0.00 0.00 4.34
2729 2735 6.592607 GGTGCATTTCATTGACTCAAAATGAT 59.407 34.615 14.78 0.00 42.15 2.45
2771 2777 0.320771 ACCGAGCAAGCACTTACCTG 60.321 55.000 0.00 0.00 0.00 4.00
2926 4251 5.607939 AACTACATCAACGATCATACCCA 57.392 39.130 0.00 0.00 0.00 4.51
3493 4824 0.630134 TCAATGGCCACCATGATCCA 59.370 50.000 8.16 0.00 44.40 3.41
3517 4848 4.810191 ACTCAAGTGAGATAGAACCACC 57.190 45.455 15.15 0.00 44.74 4.61
3539 4870 4.822026 CTCAACAAGGAACCGATCTAACT 58.178 43.478 0.00 0.00 0.00 2.24
3540 4871 4.566004 TCAACAAGGAACCGATCTAACTG 58.434 43.478 0.00 0.00 0.00 3.16
3541 4872 4.282449 TCAACAAGGAACCGATCTAACTGA 59.718 41.667 0.00 0.00 0.00 3.41
3542 4873 4.884668 ACAAGGAACCGATCTAACTGAA 57.115 40.909 0.00 0.00 0.00 3.02
3543 4874 4.822026 ACAAGGAACCGATCTAACTGAAG 58.178 43.478 0.00 0.00 0.00 3.02
3544 4875 4.184629 CAAGGAACCGATCTAACTGAAGG 58.815 47.826 0.00 0.00 34.23 3.46
3545 4876 3.709587 AGGAACCGATCTAACTGAAGGA 58.290 45.455 0.00 0.00 32.95 3.36
3546 4877 4.094476 AGGAACCGATCTAACTGAAGGAA 58.906 43.478 0.00 0.00 32.95 3.36
3547 4878 4.530946 AGGAACCGATCTAACTGAAGGAAA 59.469 41.667 0.00 0.00 32.95 3.13
3548 4879 5.189934 AGGAACCGATCTAACTGAAGGAAAT 59.810 40.000 0.00 0.00 32.95 2.17
3549 4880 6.383147 AGGAACCGATCTAACTGAAGGAAATA 59.617 38.462 0.00 0.00 32.95 1.40
3550 4881 7.071321 AGGAACCGATCTAACTGAAGGAAATAT 59.929 37.037 0.00 0.00 32.95 1.28
3551 4882 7.171678 GGAACCGATCTAACTGAAGGAAATATG 59.828 40.741 0.00 0.00 32.95 1.78
3552 4883 7.361457 ACCGATCTAACTGAAGGAAATATGA 57.639 36.000 0.00 0.00 32.95 2.15
3553 4884 7.210873 ACCGATCTAACTGAAGGAAATATGAC 58.789 38.462 0.00 0.00 32.95 3.06
3554 4885 7.070074 ACCGATCTAACTGAAGGAAATATGACT 59.930 37.037 0.00 0.00 32.95 3.41
3555 4886 7.928706 CCGATCTAACTGAAGGAAATATGACTT 59.071 37.037 0.00 0.00 0.00 3.01
3556 4887 9.967346 CGATCTAACTGAAGGAAATATGACTTA 57.033 33.333 0.00 0.00 0.00 2.24
3560 4891 9.757227 CTAACTGAAGGAAATATGACTTAGAGG 57.243 37.037 0.00 0.00 0.00 3.69
3561 4892 6.587273 ACTGAAGGAAATATGACTTAGAGGC 58.413 40.000 0.00 0.00 0.00 4.70
3562 4893 6.156949 ACTGAAGGAAATATGACTTAGAGGCA 59.843 38.462 0.00 0.00 37.84 4.75
3563 4894 6.957631 TGAAGGAAATATGACTTAGAGGCAA 58.042 36.000 0.00 0.00 36.42 4.52
3564 4895 7.577303 TGAAGGAAATATGACTTAGAGGCAAT 58.423 34.615 0.00 0.00 36.42 3.56
3565 4896 8.713971 TGAAGGAAATATGACTTAGAGGCAATA 58.286 33.333 0.00 0.00 36.42 1.90
3566 4897 9.561069 GAAGGAAATATGACTTAGAGGCAATAA 57.439 33.333 0.00 0.00 36.42 1.40
3575 4906 9.905713 ATGACTTAGAGGCAATAATAAAGTTGA 57.094 29.630 0.00 0.00 36.42 3.18
3576 4907 9.905713 TGACTTAGAGGCAATAATAAAGTTGAT 57.094 29.630 0.00 0.00 23.92 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 9.624697 GCAATTTTAGTTTGTAGATCATGACAA 57.375 29.630 0.00 0.00 33.81 3.18
6 7 8.243426 GGCAATTTTAGTTTGTAGATCATGACA 58.757 33.333 0.00 0.00 0.00 3.58
7 8 8.243426 TGGCAATTTTAGTTTGTAGATCATGAC 58.757 33.333 0.00 0.00 0.00 3.06
8 9 8.243426 GTGGCAATTTTAGTTTGTAGATCATGA 58.757 33.333 0.00 0.00 0.00 3.07
9 10 8.028354 TGTGGCAATTTTAGTTTGTAGATCATG 58.972 33.333 0.00 0.00 0.00 3.07
10 11 8.121305 TGTGGCAATTTTAGTTTGTAGATCAT 57.879 30.769 0.00 0.00 0.00 2.45
11 12 7.517614 TGTGGCAATTTTAGTTTGTAGATCA 57.482 32.000 0.00 0.00 0.00 2.92
12 13 7.489113 CCATGTGGCAATTTTAGTTTGTAGATC 59.511 37.037 0.00 0.00 0.00 2.75
13 14 7.322664 CCATGTGGCAATTTTAGTTTGTAGAT 58.677 34.615 0.00 0.00 0.00 1.98
14 15 6.686630 CCATGTGGCAATTTTAGTTTGTAGA 58.313 36.000 0.00 0.00 0.00 2.59
15 16 6.949578 CCATGTGGCAATTTTAGTTTGTAG 57.050 37.500 0.00 0.00 0.00 2.74
31 32 4.923281 GCTTAAACTAAAGTTGCCATGTGG 59.077 41.667 0.00 0.00 38.44 4.17
32 33 4.923281 GGCTTAAACTAAAGTTGCCATGTG 59.077 41.667 14.54 0.00 41.51 3.21
33 34 4.021456 GGGCTTAAACTAAAGTTGCCATGT 60.021 41.667 18.84 0.00 42.80 3.21
34 35 4.220602 AGGGCTTAAACTAAAGTTGCCATG 59.779 41.667 18.84 0.00 42.80 3.66
35 36 4.416516 AGGGCTTAAACTAAAGTTGCCAT 58.583 39.130 18.84 12.34 42.80 4.40
36 37 3.839778 AGGGCTTAAACTAAAGTTGCCA 58.160 40.909 18.84 0.00 42.80 4.92
37 38 5.163550 CCATAGGGCTTAAACTAAAGTTGCC 60.164 44.000 12.13 12.13 41.29 4.52
38 39 5.891451 CCATAGGGCTTAAACTAAAGTTGC 58.109 41.667 0.00 0.00 38.44 4.17
54 55 0.322816 ACACTGCAGTTGCCATAGGG 60.323 55.000 18.94 4.96 41.18 3.53
55 56 2.401583 TACACTGCAGTTGCCATAGG 57.598 50.000 18.94 5.76 41.18 2.57
56 57 3.501828 TGTTTACACTGCAGTTGCCATAG 59.498 43.478 18.94 6.59 41.18 2.23
57 58 3.481453 TGTTTACACTGCAGTTGCCATA 58.519 40.909 18.94 2.04 41.18 2.74
58 59 2.305928 TGTTTACACTGCAGTTGCCAT 58.694 42.857 18.94 3.07 41.18 4.40
59 60 1.756430 TGTTTACACTGCAGTTGCCA 58.244 45.000 18.94 6.98 41.18 4.92
60 61 3.052036 CAATGTTTACACTGCAGTTGCC 58.948 45.455 18.94 4.24 41.18 4.52
61 62 3.486841 CACAATGTTTACACTGCAGTTGC 59.513 43.478 18.94 6.29 42.50 4.17
62 63 4.043750 CCACAATGTTTACACTGCAGTTG 58.956 43.478 18.94 15.15 0.00 3.16
63 64 3.490761 GCCACAATGTTTACACTGCAGTT 60.491 43.478 18.94 11.49 0.00 3.16
64 65 2.034558 GCCACAATGTTTACACTGCAGT 59.965 45.455 15.25 15.25 0.00 4.40
65 66 2.034432 TGCCACAATGTTTACACTGCAG 59.966 45.455 13.48 13.48 0.00 4.41
66 67 2.027385 TGCCACAATGTTTACACTGCA 58.973 42.857 0.00 0.00 0.00 4.41
67 68 2.791383 TGCCACAATGTTTACACTGC 57.209 45.000 0.00 0.00 0.00 4.40
68 69 4.305989 AGTTGCCACAATGTTTACACTG 57.694 40.909 0.00 0.00 0.00 3.66
69 70 4.644685 AGAAGTTGCCACAATGTTTACACT 59.355 37.500 0.00 0.00 0.00 3.55
70 71 4.739716 CAGAAGTTGCCACAATGTTTACAC 59.260 41.667 0.00 0.00 0.00 2.90
71 72 4.202101 CCAGAAGTTGCCACAATGTTTACA 60.202 41.667 0.00 0.00 0.00 2.41
72 73 4.298332 CCAGAAGTTGCCACAATGTTTAC 58.702 43.478 0.00 0.00 0.00 2.01
73 74 3.243704 GCCAGAAGTTGCCACAATGTTTA 60.244 43.478 0.00 0.00 0.00 2.01
74 75 2.483538 GCCAGAAGTTGCCACAATGTTT 60.484 45.455 0.00 0.00 0.00 2.83
75 76 1.069049 GCCAGAAGTTGCCACAATGTT 59.931 47.619 0.00 0.00 0.00 2.71
76 77 0.675633 GCCAGAAGTTGCCACAATGT 59.324 50.000 0.00 0.00 0.00 2.71
77 78 0.675083 TGCCAGAAGTTGCCACAATG 59.325 50.000 0.00 0.00 0.00 2.82
78 79 1.412079 TTGCCAGAAGTTGCCACAAT 58.588 45.000 0.00 0.00 0.00 2.71
79 80 1.189752 TTTGCCAGAAGTTGCCACAA 58.810 45.000 0.00 0.00 0.00 3.33
80 81 1.189752 TTTTGCCAGAAGTTGCCACA 58.810 45.000 0.00 0.00 0.00 4.17
81 82 2.307934 TTTTTGCCAGAAGTTGCCAC 57.692 45.000 0.00 0.00 0.00 5.01
99 100 8.849490 CATGTTGATATGTTTCGACGAATTTTT 58.151 29.630 11.71 0.03 33.42 1.94
100 101 7.484641 CCATGTTGATATGTTTCGACGAATTTT 59.515 33.333 11.71 1.80 33.42 1.82
101 102 6.966632 CCATGTTGATATGTTTCGACGAATTT 59.033 34.615 11.71 2.15 33.42 1.82
102 103 6.458206 CCCATGTTGATATGTTTCGACGAATT 60.458 38.462 11.71 2.51 33.42 2.17
103 104 5.007626 CCCATGTTGATATGTTTCGACGAAT 59.992 40.000 11.71 0.00 33.42 3.34
104 105 4.331443 CCCATGTTGATATGTTTCGACGAA 59.669 41.667 6.10 6.10 33.42 3.85
105 106 3.868661 CCCATGTTGATATGTTTCGACGA 59.131 43.478 0.00 0.00 33.42 4.20
106 107 3.002246 CCCCATGTTGATATGTTTCGACG 59.998 47.826 0.00 0.00 33.42 5.12
107 108 3.945285 ACCCCATGTTGATATGTTTCGAC 59.055 43.478 0.00 0.00 0.00 4.20
108 109 4.080582 AGACCCCATGTTGATATGTTTCGA 60.081 41.667 0.00 0.00 0.00 3.71
109 110 4.199310 AGACCCCATGTTGATATGTTTCG 58.801 43.478 0.00 0.00 0.00 3.46
110 111 6.357367 ACTAGACCCCATGTTGATATGTTTC 58.643 40.000 0.00 0.00 0.00 2.78
111 112 6.327386 ACTAGACCCCATGTTGATATGTTT 57.673 37.500 0.00 0.00 0.00 2.83
112 113 5.975988 ACTAGACCCCATGTTGATATGTT 57.024 39.130 0.00 0.00 0.00 2.71
113 114 5.975988 AACTAGACCCCATGTTGATATGT 57.024 39.130 0.00 0.00 0.00 2.29
114 115 6.828273 TCAAAACTAGACCCCATGTTGATATG 59.172 38.462 0.00 0.00 0.00 1.78
115 116 6.969043 TCAAAACTAGACCCCATGTTGATAT 58.031 36.000 0.00 0.00 0.00 1.63
116 117 6.381498 TCAAAACTAGACCCCATGTTGATA 57.619 37.500 0.00 0.00 0.00 2.15
117 118 5.255397 TCAAAACTAGACCCCATGTTGAT 57.745 39.130 0.00 0.00 0.00 2.57
118 119 4.715534 TCAAAACTAGACCCCATGTTGA 57.284 40.909 0.00 0.00 0.00 3.18
119 120 5.070001 TCTTCAAAACTAGACCCCATGTTG 58.930 41.667 0.00 0.00 0.00 3.33
120 121 5.319043 TCTTCAAAACTAGACCCCATGTT 57.681 39.130 0.00 0.00 0.00 2.71
121 122 4.993705 TCTTCAAAACTAGACCCCATGT 57.006 40.909 0.00 0.00 0.00 3.21
122 123 5.749462 AGATCTTCAAAACTAGACCCCATG 58.251 41.667 0.00 0.00 0.00 3.66
123 124 5.395768 CGAGATCTTCAAAACTAGACCCCAT 60.396 44.000 0.00 0.00 0.00 4.00
124 125 4.081642 CGAGATCTTCAAAACTAGACCCCA 60.082 45.833 0.00 0.00 0.00 4.96
125 126 4.081586 ACGAGATCTTCAAAACTAGACCCC 60.082 45.833 0.00 0.00 0.00 4.95
126 127 5.074584 ACGAGATCTTCAAAACTAGACCC 57.925 43.478 0.00 0.00 0.00 4.46
127 128 4.794246 CGACGAGATCTTCAAAACTAGACC 59.206 45.833 0.00 0.00 0.00 3.85
128 129 5.629097 TCGACGAGATCTTCAAAACTAGAC 58.371 41.667 0.00 0.00 0.00 2.59
129 130 5.642491 TCTCGACGAGATCTTCAAAACTAGA 59.358 40.000 23.27 0.00 33.35 2.43
130 131 5.735427 GTCTCGACGAGATCTTCAAAACTAG 59.265 44.000 28.81 0.00 40.98 2.57
131 132 5.629097 GTCTCGACGAGATCTTCAAAACTA 58.371 41.667 28.81 0.33 40.98 2.24
132 133 4.477780 GTCTCGACGAGATCTTCAAAACT 58.522 43.478 28.81 0.00 40.98 2.66
133 134 4.809455 GTCTCGACGAGATCTTCAAAAC 57.191 45.455 28.81 10.84 40.98 2.43
147 148 3.777478 TCACCATTAAATCCGTCTCGAC 58.223 45.455 0.00 0.00 0.00 4.20
148 149 4.459390 TTCACCATTAAATCCGTCTCGA 57.541 40.909 0.00 0.00 0.00 4.04
149 150 5.321516 GTTTTCACCATTAAATCCGTCTCG 58.678 41.667 0.00 0.00 0.00 4.04
150 151 5.321516 CGTTTTCACCATTAAATCCGTCTC 58.678 41.667 0.00 0.00 0.00 3.36
151 152 4.155280 CCGTTTTCACCATTAAATCCGTCT 59.845 41.667 0.00 0.00 0.00 4.18
152 153 4.154556 TCCGTTTTCACCATTAAATCCGTC 59.845 41.667 0.00 0.00 0.00 4.79
153 154 4.073549 TCCGTTTTCACCATTAAATCCGT 58.926 39.130 0.00 0.00 0.00 4.69
154 155 4.688511 TCCGTTTTCACCATTAAATCCG 57.311 40.909 0.00 0.00 0.00 4.18
155 156 7.899178 AAAATCCGTTTTCACCATTAAATCC 57.101 32.000 0.00 0.00 32.14 3.01
157 158 9.990360 ACTAAAAATCCGTTTTCACCATTAAAT 57.010 25.926 0.00 0.00 40.07 1.40
158 159 9.819267 AACTAAAAATCCGTTTTCACCATTAAA 57.181 25.926 0.00 0.00 40.07 1.52
159 160 9.465985 GAACTAAAAATCCGTTTTCACCATTAA 57.534 29.630 0.00 0.00 40.07 1.40
160 161 8.630917 TGAACTAAAAATCCGTTTTCACCATTA 58.369 29.630 0.00 0.00 40.07 1.90
161 162 7.436970 GTGAACTAAAAATCCGTTTTCACCATT 59.563 33.333 0.00 0.00 40.07 3.16
162 163 6.921307 GTGAACTAAAAATCCGTTTTCACCAT 59.079 34.615 0.00 0.00 40.07 3.55
163 164 6.095720 AGTGAACTAAAAATCCGTTTTCACCA 59.904 34.615 7.71 0.00 40.07 4.17
164 165 6.500910 AGTGAACTAAAAATCCGTTTTCACC 58.499 36.000 7.71 0.00 40.07 4.02
165 166 7.980742 AAGTGAACTAAAAATCCGTTTTCAC 57.019 32.000 0.00 0.00 40.07 3.18
166 167 8.989653 AAAAGTGAACTAAAAATCCGTTTTCA 57.010 26.923 0.00 0.00 40.07 2.69
236 237 9.237187 ACGTATGAATAGATGACATCAGTAGAT 57.763 33.333 17.57 6.40 33.87 1.98
237 238 8.507249 CACGTATGAATAGATGACATCAGTAGA 58.493 37.037 17.57 0.00 0.00 2.59
238 239 7.752686 CCACGTATGAATAGATGACATCAGTAG 59.247 40.741 17.57 2.12 0.00 2.57
239 240 7.593825 CCACGTATGAATAGATGACATCAGTA 58.406 38.462 17.57 2.75 0.00 2.74
240 241 6.450545 CCACGTATGAATAGATGACATCAGT 58.549 40.000 17.57 2.70 0.00 3.41
241 242 5.347093 GCCACGTATGAATAGATGACATCAG 59.653 44.000 17.57 0.66 0.00 2.90
242 243 5.221422 TGCCACGTATGAATAGATGACATCA 60.221 40.000 17.57 4.35 0.00 3.07
243 244 5.230182 TGCCACGTATGAATAGATGACATC 58.770 41.667 7.39 7.39 0.00 3.06
244 245 5.213891 TGCCACGTATGAATAGATGACAT 57.786 39.130 0.00 0.00 0.00 3.06
245 246 4.664150 TGCCACGTATGAATAGATGACA 57.336 40.909 0.00 0.00 0.00 3.58
246 247 5.984233 TTTGCCACGTATGAATAGATGAC 57.016 39.130 0.00 0.00 0.00 3.06
247 248 6.765512 TCATTTTGCCACGTATGAATAGATGA 59.234 34.615 0.00 0.00 0.00 2.92
248 249 6.958255 TCATTTTGCCACGTATGAATAGATG 58.042 36.000 0.00 0.00 0.00 2.90
249 250 6.767902 ACTCATTTTGCCACGTATGAATAGAT 59.232 34.615 0.00 0.00 0.00 1.98
250 251 6.037062 CACTCATTTTGCCACGTATGAATAGA 59.963 38.462 0.00 0.00 0.00 1.98
251 252 6.194463 CACTCATTTTGCCACGTATGAATAG 58.806 40.000 0.00 0.00 0.00 1.73
252 253 5.065859 CCACTCATTTTGCCACGTATGAATA 59.934 40.000 0.00 0.00 0.00 1.75
253 254 4.142403 CCACTCATTTTGCCACGTATGAAT 60.142 41.667 0.00 0.00 0.00 2.57
254 255 3.190327 CCACTCATTTTGCCACGTATGAA 59.810 43.478 0.00 0.00 0.00 2.57
255 256 2.746904 CCACTCATTTTGCCACGTATGA 59.253 45.455 0.00 0.00 0.00 2.15
256 257 2.487762 ACCACTCATTTTGCCACGTATG 59.512 45.455 0.00 0.00 0.00 2.39
257 258 2.487762 CACCACTCATTTTGCCACGTAT 59.512 45.455 0.00 0.00 0.00 3.06
258 259 1.876799 CACCACTCATTTTGCCACGTA 59.123 47.619 0.00 0.00 0.00 3.57
259 260 0.667993 CACCACTCATTTTGCCACGT 59.332 50.000 0.00 0.00 0.00 4.49
260 261 0.950836 TCACCACTCATTTTGCCACG 59.049 50.000 0.00 0.00 0.00 4.94
261 262 2.353011 CCATCACCACTCATTTTGCCAC 60.353 50.000 0.00 0.00 0.00 5.01
262 263 1.894466 CCATCACCACTCATTTTGCCA 59.106 47.619 0.00 0.00 0.00 4.92
263 264 2.165030 CTCCATCACCACTCATTTTGCC 59.835 50.000 0.00 0.00 0.00 4.52
264 265 2.165030 CCTCCATCACCACTCATTTTGC 59.835 50.000 0.00 0.00 0.00 3.68
265 266 2.165030 GCCTCCATCACCACTCATTTTG 59.835 50.000 0.00 0.00 0.00 2.44
266 267 2.450476 GCCTCCATCACCACTCATTTT 58.550 47.619 0.00 0.00 0.00 1.82
267 268 1.679944 CGCCTCCATCACCACTCATTT 60.680 52.381 0.00 0.00 0.00 2.32
268 269 0.107508 CGCCTCCATCACCACTCATT 60.108 55.000 0.00 0.00 0.00 2.57
269 270 1.267574 ACGCCTCCATCACCACTCAT 61.268 55.000 0.00 0.00 0.00 2.90
270 271 1.913262 ACGCCTCCATCACCACTCA 60.913 57.895 0.00 0.00 0.00 3.41
271 272 1.448540 CACGCCTCCATCACCACTC 60.449 63.158 0.00 0.00 0.00 3.51
272 273 2.217038 ACACGCCTCCATCACCACT 61.217 57.895 0.00 0.00 0.00 4.00
273 274 2.034879 CACACGCCTCCATCACCAC 61.035 63.158 0.00 0.00 0.00 4.16
274 275 2.347114 CACACGCCTCCATCACCA 59.653 61.111 0.00 0.00 0.00 4.17
275 276 2.436646 CCACACGCCTCCATCACC 60.437 66.667 0.00 0.00 0.00 4.02
276 277 2.436646 CCCACACGCCTCCATCAC 60.437 66.667 0.00 0.00 0.00 3.06
277 278 4.408821 GCCCACACGCCTCCATCA 62.409 66.667 0.00 0.00 0.00 3.07
282 283 4.148825 AGATCGCCCACACGCCTC 62.149 66.667 0.00 0.00 0.00 4.70
283 284 4.457496 CAGATCGCCCACACGCCT 62.457 66.667 0.00 0.00 0.00 5.52
286 287 1.647545 ATTTGCAGATCGCCCACACG 61.648 55.000 7.00 0.00 41.33 4.49
287 288 0.179156 CATTTGCAGATCGCCCACAC 60.179 55.000 7.00 0.00 41.33 3.82
288 289 1.936436 GCATTTGCAGATCGCCCACA 61.936 55.000 7.00 0.00 41.33 4.17
289 290 1.226773 GCATTTGCAGATCGCCCAC 60.227 57.895 7.00 0.00 41.33 4.61
290 291 2.417257 GGCATTTGCAGATCGCCCA 61.417 57.895 15.39 0.00 44.36 5.36
291 292 2.414594 GGCATTTGCAGATCGCCC 59.585 61.111 15.39 2.13 44.36 6.13
292 293 2.414594 GGGCATTTGCAGATCGCC 59.585 61.111 17.04 17.04 44.36 5.54
293 294 1.226773 GTGGGCATTTGCAGATCGC 60.227 57.895 4.74 3.07 44.36 4.58
294 295 0.742505 ATGTGGGCATTTGCAGATCG 59.257 50.000 4.74 0.00 44.36 3.69
295 296 1.479323 ACATGTGGGCATTTGCAGATC 59.521 47.619 0.00 0.00 44.36 2.75
296 297 1.206132 CACATGTGGGCATTTGCAGAT 59.794 47.619 18.51 0.00 44.36 2.90
297 298 0.604073 CACATGTGGGCATTTGCAGA 59.396 50.000 18.51 0.00 44.36 4.26
298 299 0.319083 ACACATGTGGGCATTTGCAG 59.681 50.000 28.64 0.23 44.36 4.41
299 300 0.033642 CACACATGTGGGCATTTGCA 59.966 50.000 28.64 0.00 42.10 4.08
300 301 2.830264 CACACATGTGGGCATTTGC 58.170 52.632 28.64 0.00 42.10 3.68
309 310 1.282570 GTGAACGCCCACACATGTG 59.717 57.895 24.25 24.25 45.23 3.21
310 311 1.153066 TGTGAACGCCCACACATGT 60.153 52.632 6.40 0.00 41.63 3.21
311 312 3.743208 TGTGAACGCCCACACATG 58.257 55.556 6.40 0.00 41.63 3.21
316 317 1.209127 CGGAAATGTGAACGCCCAC 59.791 57.895 1.29 1.29 37.55 4.61
317 318 0.535328 TTCGGAAATGTGAACGCCCA 60.535 50.000 0.00 0.00 0.00 5.36
318 319 0.594110 TTTCGGAAATGTGAACGCCC 59.406 50.000 0.00 0.00 0.00 6.13
319 320 1.533731 TCTTTCGGAAATGTGAACGCC 59.466 47.619 3.24 0.00 0.00 5.68
320 321 2.032377 TGTCTTTCGGAAATGTGAACGC 60.032 45.455 3.24 0.00 0.00 4.84
321 322 3.870723 TGTCTTTCGGAAATGTGAACG 57.129 42.857 3.24 0.00 0.00 3.95
322 323 6.309251 TGTTTTTGTCTTTCGGAAATGTGAAC 59.691 34.615 3.24 5.85 0.00 3.18
323 324 6.390721 TGTTTTTGTCTTTCGGAAATGTGAA 58.609 32.000 3.24 0.00 0.00 3.18
324 325 5.955488 TGTTTTTGTCTTTCGGAAATGTGA 58.045 33.333 3.24 0.00 0.00 3.58
325 326 6.639671 TTGTTTTTGTCTTTCGGAAATGTG 57.360 33.333 3.24 0.00 0.00 3.21
326 327 6.091577 GGTTTGTTTTTGTCTTTCGGAAATGT 59.908 34.615 3.24 0.00 0.00 2.71
327 328 6.474364 GGTTTGTTTTTGTCTTTCGGAAATG 58.526 36.000 3.24 0.00 0.00 2.32
328 329 5.289917 CGGTTTGTTTTTGTCTTTCGGAAAT 59.710 36.000 3.24 0.00 0.00 2.17
329 330 4.621886 CGGTTTGTTTTTGTCTTTCGGAAA 59.378 37.500 2.78 2.78 0.00 3.13
330 331 4.082895 TCGGTTTGTTTTTGTCTTTCGGAA 60.083 37.500 0.00 0.00 0.00 4.30
331 332 3.439476 TCGGTTTGTTTTTGTCTTTCGGA 59.561 39.130 0.00 0.00 0.00 4.55
332 333 3.760537 TCGGTTTGTTTTTGTCTTTCGG 58.239 40.909 0.00 0.00 0.00 4.30
333 334 5.748872 TTTCGGTTTGTTTTTGTCTTTCG 57.251 34.783 0.00 0.00 0.00 3.46
334 335 7.112528 ACTTTTCGGTTTGTTTTTGTCTTTC 57.887 32.000 0.00 0.00 0.00 2.62
335 336 8.083462 TCTACTTTTCGGTTTGTTTTTGTCTTT 58.917 29.630 0.00 0.00 0.00 2.52
336 337 7.595604 TCTACTTTTCGGTTTGTTTTTGTCTT 58.404 30.769 0.00 0.00 0.00 3.01
337 338 7.148355 TCTACTTTTCGGTTTGTTTTTGTCT 57.852 32.000 0.00 0.00 0.00 3.41
338 339 6.020916 GCTCTACTTTTCGGTTTGTTTTTGTC 60.021 38.462 0.00 0.00 0.00 3.18
339 340 5.803461 GCTCTACTTTTCGGTTTGTTTTTGT 59.197 36.000 0.00 0.00 0.00 2.83
340 341 5.802956 TGCTCTACTTTTCGGTTTGTTTTTG 59.197 36.000 0.00 0.00 0.00 2.44
341 342 5.956642 TGCTCTACTTTTCGGTTTGTTTTT 58.043 33.333 0.00 0.00 0.00 1.94
342 343 5.570234 TGCTCTACTTTTCGGTTTGTTTT 57.430 34.783 0.00 0.00 0.00 2.43
343 344 5.767816 ATGCTCTACTTTTCGGTTTGTTT 57.232 34.783 0.00 0.00 0.00 2.83
344 345 6.870971 TTATGCTCTACTTTTCGGTTTGTT 57.129 33.333 0.00 0.00 0.00 2.83
345 346 7.305474 CAATTATGCTCTACTTTTCGGTTTGT 58.695 34.615 0.00 0.00 0.00 2.83
346 347 6.747280 CCAATTATGCTCTACTTTTCGGTTTG 59.253 38.462 0.00 0.00 0.00 2.93
347 348 6.433093 ACCAATTATGCTCTACTTTTCGGTTT 59.567 34.615 0.00 0.00 0.00 3.27
348 349 5.944007 ACCAATTATGCTCTACTTTTCGGTT 59.056 36.000 0.00 0.00 0.00 4.44
349 350 5.497474 ACCAATTATGCTCTACTTTTCGGT 58.503 37.500 0.00 0.00 0.00 4.69
350 351 6.436843 AACCAATTATGCTCTACTTTTCGG 57.563 37.500 0.00 0.00 0.00 4.30
351 352 7.526608 TCAAACCAATTATGCTCTACTTTTCG 58.473 34.615 0.00 0.00 0.00 3.46
352 353 9.294030 CATCAAACCAATTATGCTCTACTTTTC 57.706 33.333 0.00 0.00 0.00 2.29
353 354 7.761249 GCATCAAACCAATTATGCTCTACTTTT 59.239 33.333 0.00 0.00 41.16 2.27
354 355 7.260603 GCATCAAACCAATTATGCTCTACTTT 58.739 34.615 0.00 0.00 41.16 2.66
355 356 6.183360 GGCATCAAACCAATTATGCTCTACTT 60.183 38.462 8.17 0.00 43.33 2.24
356 357 5.300286 GGCATCAAACCAATTATGCTCTACT 59.700 40.000 8.17 0.00 43.33 2.57
357 358 5.067674 TGGCATCAAACCAATTATGCTCTAC 59.932 40.000 8.17 0.00 43.33 2.59
358 359 5.199723 TGGCATCAAACCAATTATGCTCTA 58.800 37.500 8.17 0.00 43.33 2.43
359 360 4.025360 TGGCATCAAACCAATTATGCTCT 58.975 39.130 8.17 0.00 43.33 4.09
360 361 4.389890 TGGCATCAAACCAATTATGCTC 57.610 40.909 8.17 1.21 43.33 4.26
361 362 4.822685 TTGGCATCAAACCAATTATGCT 57.177 36.364 8.17 0.00 42.23 3.79
362 363 5.876612 TTTTGGCATCAAACCAATTATGC 57.123 34.783 0.00 0.00 46.25 3.14
363 364 7.755822 CCAATTTTTGGCATCAAACCAATTATG 59.244 33.333 0.00 0.00 46.25 1.90
364 365 7.828712 CCAATTTTTGGCATCAAACCAATTAT 58.171 30.769 0.00 0.00 46.25 1.28
365 366 7.211966 CCAATTTTTGGCATCAAACCAATTA 57.788 32.000 0.00 0.00 46.25 1.40
366 367 6.086785 CCAATTTTTGGCATCAAACCAATT 57.913 33.333 0.00 0.00 46.25 2.32
367 368 5.708877 CCAATTTTTGGCATCAAACCAAT 57.291 34.783 0.00 0.00 46.25 3.16
387 388 4.766970 CCAAAATTTGGCACGCCA 57.233 50.000 12.23 6.67 45.17 5.69
395 396 7.964011 CCAATATTTAGCAGTTGCCAAAATTTG 59.036 33.333 15.72 16.52 43.38 2.32
396 397 7.361971 GCCAATATTTAGCAGTTGCCAAAATTT 60.362 33.333 15.72 8.84 43.38 1.82
397 398 6.093909 GCCAATATTTAGCAGTTGCCAAAATT 59.906 34.615 15.72 8.73 43.38 1.82
398 399 5.585844 GCCAATATTTAGCAGTTGCCAAAAT 59.414 36.000 15.17 15.17 43.38 1.82
399 400 4.934602 GCCAATATTTAGCAGTTGCCAAAA 59.065 37.500 2.07 3.77 43.38 2.44
400 401 4.222588 AGCCAATATTTAGCAGTTGCCAAA 59.777 37.500 9.34 0.04 43.38 3.28
401 402 3.768757 AGCCAATATTTAGCAGTTGCCAA 59.231 39.130 9.34 0.00 43.38 4.52
402 403 3.364549 AGCCAATATTTAGCAGTTGCCA 58.635 40.909 9.34 0.00 43.38 4.92
403 404 5.514274 TTAGCCAATATTTAGCAGTTGCC 57.486 39.130 9.34 0.00 43.38 4.52
404 405 6.329496 TGTTTAGCCAATATTTAGCAGTTGC 58.671 36.000 9.34 0.00 42.49 4.17
405 406 8.810427 CAATGTTTAGCCAATATTTAGCAGTTG 58.190 33.333 9.34 2.81 0.00 3.16
406 407 7.981225 CCAATGTTTAGCCAATATTTAGCAGTT 59.019 33.333 9.34 0.00 0.00 3.16
407 408 7.124147 ACCAATGTTTAGCCAATATTTAGCAGT 59.876 33.333 9.34 0.00 0.00 4.40
408 409 7.491682 ACCAATGTTTAGCCAATATTTAGCAG 58.508 34.615 9.34 0.00 0.00 4.24
409 410 7.416964 ACCAATGTTTAGCCAATATTTAGCA 57.583 32.000 9.34 0.00 0.00 3.49
410 411 7.254421 GCAACCAATGTTTAGCCAATATTTAGC 60.254 37.037 0.00 0.00 30.42 3.09
411 412 7.981225 AGCAACCAATGTTTAGCCAATATTTAG 59.019 33.333 0.00 0.00 30.42 1.85
412 413 7.846066 AGCAACCAATGTTTAGCCAATATTTA 58.154 30.769 0.00 0.00 30.42 1.40
413 414 6.710278 AGCAACCAATGTTTAGCCAATATTT 58.290 32.000 0.00 0.00 30.42 1.40
414 415 6.298441 AGCAACCAATGTTTAGCCAATATT 57.702 33.333 0.00 0.00 30.42 1.28
415 416 5.937975 AGCAACCAATGTTTAGCCAATAT 57.062 34.783 0.00 0.00 30.42 1.28
416 417 5.477510 CAAGCAACCAATGTTTAGCCAATA 58.522 37.500 0.00 0.00 30.53 1.90
417 418 4.317488 CAAGCAACCAATGTTTAGCCAAT 58.683 39.130 0.00 0.00 30.53 3.16
418 419 3.726607 CAAGCAACCAATGTTTAGCCAA 58.273 40.909 0.00 0.00 30.53 4.52
419 420 2.547642 GCAAGCAACCAATGTTTAGCCA 60.548 45.455 0.00 0.00 30.53 4.75
420 421 2.068519 GCAAGCAACCAATGTTTAGCC 58.931 47.619 0.00 0.00 30.53 3.93
421 422 2.068519 GGCAAGCAACCAATGTTTAGC 58.931 47.619 0.00 0.00 30.53 3.09
422 423 3.383620 TGGCAAGCAACCAATGTTTAG 57.616 42.857 0.00 0.00 33.12 1.85
423 424 3.827008 TTGGCAAGCAACCAATGTTTA 57.173 38.095 0.00 0.00 42.23 2.01
424 425 2.706339 TTGGCAAGCAACCAATGTTT 57.294 40.000 0.00 0.00 42.23 2.83
430 431 0.597568 CGAGAATTGGCAAGCAACCA 59.402 50.000 5.96 0.00 34.65 3.67
431 432 0.598065 ACGAGAATTGGCAAGCAACC 59.402 50.000 5.96 0.00 0.00 3.77
432 433 2.053627 CAACGAGAATTGGCAAGCAAC 58.946 47.619 5.96 0.00 0.00 4.17
433 434 1.602668 GCAACGAGAATTGGCAAGCAA 60.603 47.619 5.96 0.00 0.00 3.91
434 435 0.039256 GCAACGAGAATTGGCAAGCA 60.039 50.000 5.96 0.00 0.00 3.91
435 436 2.729378 GCAACGAGAATTGGCAAGC 58.271 52.632 5.96 0.00 0.00 4.01
440 441 2.749076 TGAGATTGGCAACGAGAATTGG 59.251 45.455 0.00 0.00 42.51 3.16
441 442 3.189080 TGTGAGATTGGCAACGAGAATTG 59.811 43.478 0.00 0.00 42.51 2.32
442 443 3.411446 TGTGAGATTGGCAACGAGAATT 58.589 40.909 0.00 0.00 42.51 2.17
443 444 3.057969 TGTGAGATTGGCAACGAGAAT 57.942 42.857 0.00 0.00 42.51 2.40
444 445 2.542020 TGTGAGATTGGCAACGAGAA 57.458 45.000 0.00 0.00 42.51 2.87
445 446 2.542020 TTGTGAGATTGGCAACGAGA 57.458 45.000 0.00 0.00 42.51 4.04
446 447 3.624326 TTTTGTGAGATTGGCAACGAG 57.376 42.857 0.00 0.00 42.51 4.18
447 448 3.380004 ACTTTTTGTGAGATTGGCAACGA 59.620 39.130 0.00 0.00 42.51 3.85
448 449 3.705604 ACTTTTTGTGAGATTGGCAACG 58.294 40.909 0.00 0.00 42.51 4.10
449 450 4.260334 GCAACTTTTTGTGAGATTGGCAAC 60.260 41.667 0.00 0.00 34.90 4.17
450 451 3.870419 GCAACTTTTTGTGAGATTGGCAA 59.130 39.130 0.68 0.68 34.90 4.52
451 452 3.456280 GCAACTTTTTGTGAGATTGGCA 58.544 40.909 0.00 0.00 34.90 4.92
452 453 2.802247 GGCAACTTTTTGTGAGATTGGC 59.198 45.455 0.00 0.00 34.90 4.52
453 454 4.057406 TGGCAACTTTTTGTGAGATTGG 57.943 40.909 0.00 0.00 34.90 3.16
454 455 6.607735 ATTTGGCAACTTTTTGTGAGATTG 57.392 33.333 0.00 0.00 34.90 2.67
455 456 8.776470 CAATATTTGGCAACTTTTTGTGAGATT 58.224 29.630 0.00 0.00 34.90 2.40
456 457 7.388500 CCAATATTTGGCAACTTTTTGTGAGAT 59.612 33.333 0.00 0.00 45.17 2.75
457 458 6.705381 CCAATATTTGGCAACTTTTTGTGAGA 59.295 34.615 0.00 0.00 45.17 3.27
458 459 6.890558 CCAATATTTGGCAACTTTTTGTGAG 58.109 36.000 0.00 0.00 45.17 3.51
459 460 6.857777 CCAATATTTGGCAACTTTTTGTGA 57.142 33.333 0.00 0.00 45.17 3.58
473 474 7.238571 GCAAAATCAGAAGTTGCCAATATTTG 58.761 34.615 9.37 0.00 41.41 2.32
474 475 7.368480 GCAAAATCAGAAGTTGCCAATATTT 57.632 32.000 9.37 0.00 41.41 1.40
475 476 6.973229 GCAAAATCAGAAGTTGCCAATATT 57.027 33.333 9.37 0.00 41.41 1.28
482 483 4.512571 ACATTTGGCAAAATCAGAAGTTGC 59.487 37.500 17.70 11.38 45.48 4.17
483 484 6.423862 CAACATTTGGCAAAATCAGAAGTTG 58.576 36.000 17.70 16.48 33.59 3.16
484 485 5.528320 CCAACATTTGGCAAAATCAGAAGTT 59.472 36.000 17.70 9.90 45.17 2.66
485 486 5.058490 CCAACATTTGGCAAAATCAGAAGT 58.942 37.500 17.70 4.62 45.17 3.01
486 487 5.600908 CCAACATTTGGCAAAATCAGAAG 57.399 39.130 17.70 3.78 45.17 2.85
499 500 8.986847 TGTTAATATTTGACAAGCCAACATTTG 58.013 29.630 0.00 0.00 0.00 2.32
500 501 9.553064 TTGTTAATATTTGACAAGCCAACATTT 57.447 25.926 11.07 0.00 0.00 2.32
501 502 9.723601 ATTGTTAATATTTGACAAGCCAACATT 57.276 25.926 16.96 4.43 36.80 2.71
502 503 9.153721 CATTGTTAATATTTGACAAGCCAACAT 57.846 29.630 16.96 2.84 36.80 2.71
503 504 7.117523 GCATTGTTAATATTTGACAAGCCAACA 59.882 33.333 16.96 6.81 36.80 3.33
504 505 7.412891 GGCATTGTTAATATTTGACAAGCCAAC 60.413 37.037 26.70 13.77 41.64 3.77
505 506 6.593382 GGCATTGTTAATATTTGACAAGCCAA 59.407 34.615 26.70 10.55 41.64 4.52
506 507 6.105333 GGCATTGTTAATATTTGACAAGCCA 58.895 36.000 26.70 11.07 41.64 4.75
507 508 6.105333 TGGCATTGTTAATATTTGACAAGCC 58.895 36.000 25.99 25.99 41.96 4.35
508 509 7.593875 TTGGCATTGTTAATATTTGACAAGC 57.406 32.000 16.96 17.52 36.80 4.01
509 510 9.976255 CATTTGGCATTGTTAATATTTGACAAG 57.024 29.630 16.96 12.17 36.72 3.16
510 511 9.499479 ACATTTGGCATTGTTAATATTTGACAA 57.501 25.926 15.26 15.26 37.64 3.18
511 512 9.499479 AACATTTGGCATTGTTAATATTTGACA 57.501 25.926 12.91 0.00 34.42 3.58
520 521 9.494271 TTTGCTATTAACATTTGGCATTGTTAA 57.506 25.926 25.55 25.55 46.50 2.01
521 522 8.930760 GTTTGCTATTAACATTTGGCATTGTTA 58.069 29.630 15.54 15.54 37.29 2.41
522 523 7.094848 GGTTTGCTATTAACATTTGGCATTGTT 60.095 33.333 17.13 17.13 39.32 2.83
523 524 6.371271 GGTTTGCTATTAACATTTGGCATTGT 59.629 34.615 0.00 0.00 0.00 2.71
524 525 6.370994 TGGTTTGCTATTAACATTTGGCATTG 59.629 34.615 0.00 0.00 0.00 2.82
525 526 6.471146 TGGTTTGCTATTAACATTTGGCATT 58.529 32.000 0.00 0.00 0.00 3.56
526 527 6.047511 TGGTTTGCTATTAACATTTGGCAT 57.952 33.333 0.00 0.00 0.00 4.40
527 528 5.474578 TGGTTTGCTATTAACATTTGGCA 57.525 34.783 0.00 0.00 0.00 4.92
528 529 6.983474 ATTGGTTTGCTATTAACATTTGGC 57.017 33.333 0.00 0.00 0.00 4.52
530 531 9.919348 GCATAATTGGTTTGCTATTAACATTTG 57.081 29.630 0.00 0.00 33.61 2.32
531 532 9.889128 AGCATAATTGGTTTGCTATTAACATTT 57.111 25.926 5.54 0.00 44.51 2.32
532 533 9.316730 CAGCATAATTGGTTTGCTATTAACATT 57.683 29.630 6.67 0.00 44.54 2.71
533 534 8.477256 ACAGCATAATTGGTTTGCTATTAACAT 58.523 29.630 6.67 0.00 44.54 2.71
534 535 7.835822 ACAGCATAATTGGTTTGCTATTAACA 58.164 30.769 6.67 0.00 44.54 2.41
535 536 9.233232 GTACAGCATAATTGGTTTGCTATTAAC 57.767 33.333 6.67 0.00 44.54 2.01
536 537 8.961634 TGTACAGCATAATTGGTTTGCTATTAA 58.038 29.630 0.00 0.00 44.54 1.40
537 538 8.512966 TGTACAGCATAATTGGTTTGCTATTA 57.487 30.769 0.00 0.00 44.54 0.98
538 539 7.403312 TGTACAGCATAATTGGTTTGCTATT 57.597 32.000 0.00 2.03 44.54 1.73
539 540 7.122650 AGTTGTACAGCATAATTGGTTTGCTAT 59.877 33.333 12.54 0.44 44.54 2.97
540 541 6.432783 AGTTGTACAGCATAATTGGTTTGCTA 59.567 34.615 12.54 0.00 44.54 3.49
542 543 5.469479 AGTTGTACAGCATAATTGGTTTGC 58.531 37.500 12.54 0.00 36.63 3.68
543 544 6.071952 AGGAGTTGTACAGCATAATTGGTTTG 60.072 38.462 12.54 0.00 0.00 2.93
544 545 6.010219 AGGAGTTGTACAGCATAATTGGTTT 58.990 36.000 12.54 0.00 0.00 3.27
545 546 5.570320 AGGAGTTGTACAGCATAATTGGTT 58.430 37.500 12.54 0.00 0.00 3.67
546 547 5.179452 AGGAGTTGTACAGCATAATTGGT 57.821 39.130 12.54 0.00 0.00 3.67
547 548 5.760253 CCTAGGAGTTGTACAGCATAATTGG 59.240 44.000 12.54 3.39 0.00 3.16
548 549 5.237344 GCCTAGGAGTTGTACAGCATAATTG 59.763 44.000 14.75 0.00 0.00 2.32
549 550 5.131142 AGCCTAGGAGTTGTACAGCATAATT 59.869 40.000 14.75 0.00 0.00 1.40
550 551 4.656112 AGCCTAGGAGTTGTACAGCATAAT 59.344 41.667 14.75 0.00 0.00 1.28
551 552 4.030913 AGCCTAGGAGTTGTACAGCATAA 58.969 43.478 14.75 0.00 0.00 1.90
552 553 3.643237 AGCCTAGGAGTTGTACAGCATA 58.357 45.455 14.75 1.47 0.00 3.14
553 554 2.472029 AGCCTAGGAGTTGTACAGCAT 58.528 47.619 14.75 0.31 0.00 3.79
554 555 1.938585 AGCCTAGGAGTTGTACAGCA 58.061 50.000 14.75 0.00 0.00 4.41
555 556 3.181474 CCTTAGCCTAGGAGTTGTACAGC 60.181 52.174 14.75 0.72 37.50 4.40
556 557 3.181474 GCCTTAGCCTAGGAGTTGTACAG 60.181 52.174 14.75 0.00 37.50 2.74
557 558 2.764572 GCCTTAGCCTAGGAGTTGTACA 59.235 50.000 14.75 0.00 37.50 2.90
558 559 3.032459 AGCCTTAGCCTAGGAGTTGTAC 58.968 50.000 14.75 0.00 41.25 2.90
607 608 0.884259 TGGTTGCACTCATCACCGTG 60.884 55.000 0.00 0.00 0.00 4.94
609 610 1.935873 CTATGGTTGCACTCATCACCG 59.064 52.381 4.44 0.00 0.00 4.94
655 656 4.054671 GGTGATGGATCGAATCTTGACTC 58.945 47.826 8.11 0.00 0.00 3.36
695 696 2.228103 ACTATCTGTCGACAAGCGTCAA 59.772 45.455 20.49 0.39 42.74 3.18
924 925 1.806623 GCGCTCTCATTCCCATAACGT 60.807 52.381 0.00 0.00 0.00 3.99
935 936 1.303309 GTTATGCTTGGCGCTCTCAT 58.697 50.000 7.64 8.65 40.11 2.90
1103 1104 0.111253 CAGAGCAACCAGGGGAAACT 59.889 55.000 0.00 0.00 0.00 2.66
1206 1207 3.989838 ATCCGTCTCTCCGTCGGCA 62.990 63.158 6.34 0.00 43.35 5.69
1280 1281 2.598394 GGCAGCCCTGACTTGCAA 60.598 61.111 0.00 0.00 39.54 4.08
1288 1289 2.438075 GCAGAGAAGGCAGCCCTG 60.438 66.667 8.22 9.52 41.90 4.45
1313 1315 1.597742 CCTTCATCCACGCCCTTATG 58.402 55.000 0.00 0.00 0.00 1.90
1394 1398 3.692406 GGACCGCGGAAGACCACT 61.692 66.667 35.90 6.14 35.59 4.00
1409 1413 1.078497 CATGTAGCCCTTGCACGGA 60.078 57.895 11.54 0.00 41.13 4.69
1650 1654 5.620205 CGAGCAGCTCAGTTAAGACTTAAGA 60.620 44.000 22.49 2.83 32.54 2.10
1651 1655 4.560819 CGAGCAGCTCAGTTAAGACTTAAG 59.439 45.833 22.49 0.00 32.54 1.85
1652 1656 4.486090 CGAGCAGCTCAGTTAAGACTTAA 58.514 43.478 22.49 3.44 32.54 1.85
1653 1657 3.119459 CCGAGCAGCTCAGTTAAGACTTA 60.119 47.826 22.49 0.00 32.54 2.24
1654 1658 2.353208 CCGAGCAGCTCAGTTAAGACTT 60.353 50.000 22.49 0.00 32.54 3.01
1655 1659 1.203523 CCGAGCAGCTCAGTTAAGACT 59.796 52.381 22.49 0.00 36.25 3.24
1656 1660 1.634702 CCGAGCAGCTCAGTTAAGAC 58.365 55.000 22.49 0.00 0.00 3.01
1686 1690 7.918076 TGGTTAAGGAGAAGTTCTATCATGTT 58.082 34.615 5.09 0.00 0.00 2.71
1735 1741 1.209275 CCCGAGCTTTATCGACTGCG 61.209 60.000 0.00 0.00 45.56 5.18
1814 1820 1.235281 CCTGGCTGCCGATGATGATG 61.235 60.000 14.98 0.00 0.00 3.07
1978 1984 4.735132 ACACGGTGATGTCGGCGG 62.735 66.667 16.29 0.00 0.00 6.13
2708 2714 7.589574 TGCATCATTTTGAGTCAATGAAATG 57.410 32.000 17.28 17.28 42.53 2.32
2753 2759 1.021390 CCAGGTAAGTGCTTGCTCGG 61.021 60.000 0.51 0.00 0.00 4.63
2771 2777 6.414732 TGTGCATCCTATATATACAAAGGCC 58.585 40.000 0.00 0.00 0.00 5.19
2830 4155 5.163652 GGTATAATTTTGCTCTTTGCCGACT 60.164 40.000 0.00 0.00 42.00 4.18
2873 4198 6.093357 GTGTTTGATTTTTCTTTTTCCTGGCA 59.907 34.615 0.00 0.00 0.00 4.92
2926 4251 3.527253 TGGGGTCAAGATATGGTTGATGT 59.473 43.478 1.41 0.00 36.35 3.06
3487 4818 4.897509 ATCTCACTTGAGTTGTGGATCA 57.102 40.909 6.15 0.00 42.60 2.92
3493 4824 5.511545 GGTGGTTCTATCTCACTTGAGTTGT 60.512 44.000 6.15 0.00 42.60 3.32
3517 4848 4.627467 CAGTTAGATCGGTTCCTTGTTGAG 59.373 45.833 0.00 0.00 0.00 3.02
3539 4870 6.560003 TGCCTCTAAGTCATATTTCCTTCA 57.440 37.500 0.00 0.00 0.00 3.02
3540 4871 9.561069 TTATTGCCTCTAAGTCATATTTCCTTC 57.439 33.333 0.00 0.00 0.00 3.46
3549 4880 9.905713 TCAACTTTATTATTGCCTCTAAGTCAT 57.094 29.630 0.00 0.00 0.00 3.06
3550 4881 9.905713 ATCAACTTTATTATTGCCTCTAAGTCA 57.094 29.630 0.00 0.00 0.00 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.