Multiple sequence alignment - TraesCS7B01G301100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G301100 chr7B 100.000 4481 0 0 1 4481 538124492 538128972 0.000000e+00 8275.0
1 TraesCS7B01G301100 chr7B 92.961 2415 148 5 1088 3483 538207986 538205575 0.000000e+00 3498.0
2 TraesCS7B01G301100 chr7B 90.346 549 50 3 2942 3489 538203617 538203071 0.000000e+00 717.0
3 TraesCS7B01G301100 chr7D 92.603 2420 152 10 1088 3489 509697847 509700257 0.000000e+00 3452.0
4 TraesCS7B01G301100 chr7D 92.146 1095 72 6 2403 3485 509836741 509835649 0.000000e+00 1533.0
5 TraesCS7B01G301100 chr7D 90.780 423 22 8 3550 3966 509700407 509700818 2.360000e-152 549.0
6 TraesCS7B01G301100 chr7D 89.547 287 21 1 1 278 509694367 509694653 5.510000e-94 355.0
7 TraesCS7B01G301100 chr7D 94.444 126 7 0 4220 4345 509701021 509701146 1.270000e-45 195.0
8 TraesCS7B01G301100 chr7D 96.591 88 1 1 295 380 509694720 509694807 1.300000e-30 145.0
9 TraesCS7B01G301100 chr7D 85.714 84 7 3 4398 4481 509701234 509701312 2.870000e-12 84.2
10 TraesCS7B01G301100 chr7A 90.809 2622 181 21 896 3489 580657431 580654842 0.000000e+00 3452.0
11 TraesCS7B01G301100 chr7A 80.659 910 117 38 2541 3398 42454630 42453728 0.000000e+00 651.0
12 TraesCS7B01G301100 chr7A 84.843 541 50 13 2949 3488 580650393 580649884 2.390000e-142 516.0
13 TraesCS7B01G301100 chr7A 86.236 356 29 7 1 336 580641761 580642116 7.080000e-98 368.0
14 TraesCS7B01G301100 chr7A 80.473 338 26 20 470 780 580649327 580649651 5.830000e-54 222.0
15 TraesCS7B01G301100 chr7A 96.000 50 2 0 3486 3535 580652732 580652781 1.030000e-11 82.4
16 TraesCS7B01G301100 chr3B 75.722 1870 361 62 1604 3398 70311337 70313188 0.000000e+00 852.0
17 TraesCS7B01G301100 chr4A 80.591 948 122 37 2543 3435 650312827 650311887 0.000000e+00 675.0
18 TraesCS7B01G301100 chr4A 79.227 905 135 28 2543 3398 740178757 740179657 8.360000e-162 580.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G301100 chr7B 538124492 538128972 4480 False 8275.0 8275 100.000000 1 4481 1 chr7B.!!$F1 4480
1 TraesCS7B01G301100 chr7B 538203071 538207986 4915 True 2107.5 3498 91.653500 1088 3489 2 chr7B.!!$R1 2401
2 TraesCS7B01G301100 chr7D 509835649 509836741 1092 True 1533.0 1533 92.146000 2403 3485 1 chr7D.!!$R1 1082
3 TraesCS7B01G301100 chr7D 509694367 509701312 6945 False 796.7 3452 91.613167 1 4481 6 chr7D.!!$F1 4480
4 TraesCS7B01G301100 chr7A 580654842 580657431 2589 True 3452.0 3452 90.809000 896 3489 1 chr7A.!!$R3 2593
5 TraesCS7B01G301100 chr7A 42453728 42454630 902 True 651.0 651 80.659000 2541 3398 1 chr7A.!!$R1 857
6 TraesCS7B01G301100 chr7A 580649884 580650393 509 True 516.0 516 84.843000 2949 3488 1 chr7A.!!$R2 539
7 TraesCS7B01G301100 chr3B 70311337 70313188 1851 False 852.0 852 75.722000 1604 3398 1 chr3B.!!$F1 1794
8 TraesCS7B01G301100 chr4A 650311887 650312827 940 True 675.0 675 80.591000 2543 3435 1 chr4A.!!$R1 892
9 TraesCS7B01G301100 chr4A 740178757 740179657 900 False 580.0 580 79.227000 2543 3398 1 chr4A.!!$F1 855

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
403 463 0.035439 AACATGTCCACACCGGGATC 60.035 55.0 6.32 0.0 39.62 3.36 F
530 2206 0.035739 TCCCTGTTTTGCGTCTACCC 59.964 55.0 0.00 0.0 0.00 3.69 F
820 3302 0.038251 CTAGCTGTGGTCTTGTGCGA 60.038 55.0 0.00 0.0 0.00 5.10 F
2310 4822 0.179100 CGCTGATGATCAACGGGACT 60.179 55.0 10.16 0.0 32.85 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2260 4772 0.038251 TAGCAGTCGTTGAGGCAGTG 60.038 55.0 0.00 0.00 0.0 3.66 R
2495 5019 0.109342 CTTCTTGGTCAGGTGGTGCT 59.891 55.0 0.00 0.00 0.0 4.40 R
2739 5284 1.431488 CGATCATGCGGACCAGGTTG 61.431 60.0 0.00 0.00 0.0 3.77 R
4019 6998 0.109412 AGTCAAGGTGCTACGCGTAC 60.109 55.0 16.41 8.67 0.0 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 2.359975 CTGGACGGTGGGAAAGGC 60.360 66.667 0.00 0.00 0.00 4.35
30 31 1.527380 GGTGGGAAAGGCGTTGTCA 60.527 57.895 0.00 0.00 0.00 3.58
36 37 2.543031 GGGAAAGGCGTTGTCAAGTTTC 60.543 50.000 0.00 0.00 0.00 2.78
130 140 1.077930 ATGAGCAAGTGGAGCGCAT 60.078 52.632 11.47 0.00 45.20 4.73
164 174 2.154462 CTGCCTGGGTTACTTTGTGAG 58.846 52.381 0.00 0.00 0.00 3.51
172 182 5.245531 TGGGTTACTTTGTGAGCTTATGAG 58.754 41.667 0.00 0.00 0.00 2.90
193 203 2.216898 GCTACTCAATGATGTGGGAGC 58.783 52.381 0.00 0.00 33.15 4.70
209 219 3.013219 GGGAGCACTTCAGAAAATCCTC 58.987 50.000 0.00 0.00 0.00 3.71
216 226 5.123979 GCACTTCAGAAAATCCTCGGTAATT 59.876 40.000 0.00 0.00 0.00 1.40
250 260 8.647143 ATTTTGTTGACTGAACCTTGTAAATG 57.353 30.769 0.00 0.00 33.07 2.32
255 265 6.767524 TGACTGAACCTTGTAAATGTTTGT 57.232 33.333 0.00 0.00 34.77 2.83
268 278 3.648339 ATGTTTGTTAGCCAGCAGTTG 57.352 42.857 0.00 0.00 0.00 3.16
272 282 0.602638 TGTTAGCCAGCAGTTGACCG 60.603 55.000 0.00 0.00 0.00 4.79
278 288 1.933853 GCCAGCAGTTGACCGTTATAG 59.066 52.381 0.00 0.00 0.00 1.31
279 289 1.933853 CCAGCAGTTGACCGTTATAGC 59.066 52.381 0.00 0.00 0.00 2.97
280 290 2.616960 CAGCAGTTGACCGTTATAGCA 58.383 47.619 0.00 0.00 0.00 3.49
281 291 2.348666 CAGCAGTTGACCGTTATAGCAC 59.651 50.000 0.00 0.00 0.00 4.40
282 292 1.323534 GCAGTTGACCGTTATAGCACG 59.676 52.381 0.00 0.00 40.02 5.34
283 293 1.323534 CAGTTGACCGTTATAGCACGC 59.676 52.381 0.00 0.00 38.93 5.34
285 295 1.060122 GTTGACCGTTATAGCACGCAC 59.940 52.381 0.00 0.00 38.93 5.34
286 296 0.799152 TGACCGTTATAGCACGCACG 60.799 55.000 0.00 0.00 38.93 5.34
288 298 0.799534 ACCGTTATAGCACGCACGTC 60.800 55.000 0.00 0.00 38.93 4.34
290 300 0.524816 CGTTATAGCACGCACGTCCT 60.525 55.000 0.00 0.00 32.43 3.85
291 301 1.197910 GTTATAGCACGCACGTCCTC 58.802 55.000 0.00 0.00 0.00 3.71
368 428 2.028420 TACTCGTACGCAGCCTTCTA 57.972 50.000 11.24 0.00 0.00 2.10
373 433 1.660614 CGTACGCAGCCTTCTATCTCG 60.661 57.143 0.52 0.00 0.00 4.04
374 434 0.952280 TACGCAGCCTTCTATCTCGG 59.048 55.000 0.00 0.00 0.00 4.63
375 435 0.752009 ACGCAGCCTTCTATCTCGGA 60.752 55.000 0.00 0.00 0.00 4.55
376 436 0.318275 CGCAGCCTTCTATCTCGGAC 60.318 60.000 0.00 0.00 0.00 4.79
380 440 2.363680 CAGCCTTCTATCTCGGACACAT 59.636 50.000 0.00 0.00 0.00 3.21
381 441 3.034635 AGCCTTCTATCTCGGACACATT 58.965 45.455 0.00 0.00 0.00 2.71
382 442 4.038042 CAGCCTTCTATCTCGGACACATTA 59.962 45.833 0.00 0.00 0.00 1.90
383 443 4.835615 AGCCTTCTATCTCGGACACATTAT 59.164 41.667 0.00 0.00 0.00 1.28
384 444 6.010850 AGCCTTCTATCTCGGACACATTATA 58.989 40.000 0.00 0.00 0.00 0.98
385 445 6.493802 AGCCTTCTATCTCGGACACATTATAA 59.506 38.462 0.00 0.00 0.00 0.98
386 446 6.586844 GCCTTCTATCTCGGACACATTATAAC 59.413 42.308 0.00 0.00 0.00 1.89
388 448 8.307483 CCTTCTATCTCGGACACATTATAACAT 58.693 37.037 0.00 0.00 0.00 2.71
389 449 9.133627 CTTCTATCTCGGACACATTATAACATG 57.866 37.037 0.00 0.00 0.00 3.21
390 450 8.178313 TCTATCTCGGACACATTATAACATGT 57.822 34.615 0.00 0.00 37.93 3.21
391 451 8.297426 TCTATCTCGGACACATTATAACATGTC 58.703 37.037 17.17 17.17 40.62 3.06
397 457 6.119144 GACACATTATAACATGTCCACACC 57.881 41.667 15.53 0.00 35.03 4.16
398 458 4.634004 ACACATTATAACATGTCCACACCG 59.366 41.667 0.00 0.00 35.03 4.94
400 460 2.992124 TATAACATGTCCACACCGGG 57.008 50.000 6.32 0.00 34.36 5.73
402 462 1.281419 TAACATGTCCACACCGGGAT 58.719 50.000 6.32 0.00 39.62 3.85
403 463 0.035439 AACATGTCCACACCGGGATC 60.035 55.000 6.32 0.00 39.62 3.36
404 464 1.521457 CATGTCCACACCGGGATCG 60.521 63.158 6.32 0.00 39.62 3.69
414 474 4.496670 CGGGATCGGTGAACAGTC 57.503 61.111 0.00 0.00 0.00 3.51
416 476 0.037697 CGGGATCGGTGAACAGTCAA 60.038 55.000 0.00 0.00 34.87 3.18
417 477 1.726853 GGGATCGGTGAACAGTCAAG 58.273 55.000 0.00 0.00 34.87 3.02
418 478 1.275291 GGGATCGGTGAACAGTCAAGA 59.725 52.381 0.00 0.00 34.87 3.02
419 479 2.093447 GGGATCGGTGAACAGTCAAGAT 60.093 50.000 0.00 0.00 36.60 2.40
431 722 6.204688 TGAACAGTCAAGATAACATGGTGTTC 59.795 38.462 12.89 12.89 40.22 3.18
433 724 7.004555 ACAGTCAAGATAACATGGTGTTCTA 57.995 36.000 0.00 0.00 40.22 2.10
440 736 7.113658 AGATAACATGGTGTTCTACTAGGTG 57.886 40.000 0.00 0.00 40.22 4.00
464 760 6.706055 ACTGAACAGTCAACATATAACGTG 57.294 37.500 1.32 0.00 36.92 4.49
466 762 6.145534 ACTGAACAGTCAACATATAACGTGTG 59.854 38.462 1.32 0.00 36.92 3.82
468 764 5.839262 ACAGTCAACATATAACGTGTGTG 57.161 39.130 0.00 0.00 31.96 3.82
469 765 5.534407 ACAGTCAACATATAACGTGTGTGA 58.466 37.500 0.00 0.00 31.96 3.58
471 767 6.310467 ACAGTCAACATATAACGTGTGTGATC 59.690 38.462 0.00 0.00 31.96 2.92
472 768 5.810587 AGTCAACATATAACGTGTGTGATCC 59.189 40.000 0.00 0.00 31.96 3.36
473 769 5.810587 GTCAACATATAACGTGTGTGATCCT 59.189 40.000 0.00 0.00 31.96 3.24
475 771 6.533723 TCAACATATAACGTGTGTGATCCTTC 59.466 38.462 0.00 0.00 31.96 3.46
476 772 5.357257 ACATATAACGTGTGTGATCCTTCC 58.643 41.667 0.00 0.00 30.22 3.46
479 775 1.125093 ACGTGTGTGATCCTTCCCCA 61.125 55.000 0.00 0.00 0.00 4.96
492 2168 0.704076 TTCCCCACCCTTTCCATCTG 59.296 55.000 0.00 0.00 0.00 2.90
493 2169 1.380380 CCCCACCCTTTCCATCTGC 60.380 63.158 0.00 0.00 0.00 4.26
494 2170 1.383799 CCCACCCTTTCCATCTGCA 59.616 57.895 0.00 0.00 0.00 4.41
498 2174 2.517959 CACCCTTTCCATCTGCAGAAA 58.482 47.619 22.50 7.97 0.00 2.52
501 2177 2.892852 CCCTTTCCATCTGCAGAAAACA 59.107 45.455 22.50 2.49 31.91 2.83
503 2179 4.381292 CCCTTTCCATCTGCAGAAAACATC 60.381 45.833 22.50 0.00 31.91 3.06
507 2183 2.358957 CATCTGCAGAAAACATCCGGA 58.641 47.619 22.50 6.61 0.00 5.14
508 2184 2.099141 TCTGCAGAAAACATCCGGAG 57.901 50.000 15.67 4.72 0.00 4.63
509 2185 1.623311 TCTGCAGAAAACATCCGGAGA 59.377 47.619 15.67 0.00 31.24 3.71
511 2187 1.347707 TGCAGAAAACATCCGGAGACT 59.652 47.619 11.34 0.00 0.00 3.24
512 2188 2.003301 GCAGAAAACATCCGGAGACTC 58.997 52.381 11.34 1.91 0.00 3.36
513 2189 2.622436 CAGAAAACATCCGGAGACTCC 58.378 52.381 11.34 11.87 0.00 3.85
514 2190 1.555533 AGAAAACATCCGGAGACTCCC 59.444 52.381 16.13 0.00 31.13 4.30
515 2191 1.555533 GAAAACATCCGGAGACTCCCT 59.444 52.381 16.13 0.00 31.13 4.20
516 2192 0.905357 AAACATCCGGAGACTCCCTG 59.095 55.000 16.13 12.78 31.13 4.45
517 2193 0.252284 AACATCCGGAGACTCCCTGT 60.252 55.000 16.13 13.39 31.13 4.00
521 2197 0.685097 TCCGGAGACTCCCTGTTTTG 59.315 55.000 16.13 0.00 31.13 2.44
522 2198 0.955919 CCGGAGACTCCCTGTTTTGC 60.956 60.000 16.13 0.00 31.13 3.68
523 2199 1.291877 CGGAGACTCCCTGTTTTGCG 61.292 60.000 16.13 0.00 31.13 4.85
524 2200 0.250338 GGAGACTCCCTGTTTTGCGT 60.250 55.000 10.74 0.00 0.00 5.24
525 2201 1.149148 GAGACTCCCTGTTTTGCGTC 58.851 55.000 0.00 0.00 0.00 5.19
526 2202 0.759346 AGACTCCCTGTTTTGCGTCT 59.241 50.000 0.00 0.00 0.00 4.18
527 2203 1.968493 AGACTCCCTGTTTTGCGTCTA 59.032 47.619 0.00 0.00 30.65 2.59
529 2205 1.270678 ACTCCCTGTTTTGCGTCTACC 60.271 52.381 0.00 0.00 0.00 3.18
530 2206 0.035739 TCCCTGTTTTGCGTCTACCC 59.964 55.000 0.00 0.00 0.00 3.69
531 2207 1.296056 CCCTGTTTTGCGTCTACCCG 61.296 60.000 0.00 0.00 0.00 5.28
533 2209 1.337074 CCTGTTTTGCGTCTACCCGTA 60.337 52.381 0.00 0.00 0.00 4.02
534 2210 1.990563 CTGTTTTGCGTCTACCCGTAG 59.009 52.381 0.00 0.00 34.56 3.51
536 2212 0.317799 TTTTGCGTCTACCCGTAGCA 59.682 50.000 0.00 0.00 35.90 3.49
538 2214 0.179121 TTGCGTCTACCCGTAGCATG 60.179 55.000 0.00 0.00 37.68 4.06
544 2677 1.479323 TCTACCCGTAGCATGTTGACC 59.521 52.381 0.00 0.00 33.32 4.02
546 2679 2.461110 CCCGTAGCATGTTGACCGC 61.461 63.158 0.00 0.00 0.00 5.68
547 2680 1.447838 CCGTAGCATGTTGACCGCT 60.448 57.895 0.00 0.00 39.80 5.52
552 2685 0.957395 AGCATGTTGACCGCTTCCTG 60.957 55.000 0.00 0.00 29.87 3.86
554 2687 1.002134 ATGTTGACCGCTTCCTGGG 60.002 57.895 0.00 0.00 0.00 4.45
559 2692 0.766131 TGACCGCTTCCTGGGTTAAA 59.234 50.000 0.00 0.00 36.46 1.52
560 2693 1.162698 GACCGCTTCCTGGGTTAAAC 58.837 55.000 0.00 0.00 36.46 2.01
564 2697 2.287970 CCGCTTCCTGGGTTAAACAAAC 60.288 50.000 0.00 0.00 37.36 2.93
568 2701 5.179533 GCTTCCTGGGTTAAACAAACAAAA 58.820 37.500 0.00 0.00 40.08 2.44
570 2703 6.238347 GCTTCCTGGGTTAAACAAACAAAATG 60.238 38.462 0.00 0.00 40.08 2.32
571 2704 5.675538 TCCTGGGTTAAACAAACAAAATGG 58.324 37.500 0.00 0.00 40.08 3.16
572 2705 5.425539 TCCTGGGTTAAACAAACAAAATGGA 59.574 36.000 0.00 0.00 40.08 3.41
573 2706 6.100424 TCCTGGGTTAAACAAACAAAATGGAT 59.900 34.615 0.00 0.00 40.08 3.41
575 2708 7.130681 TGGGTTAAACAAACAAAATGGATCT 57.869 32.000 0.00 0.00 40.08 2.75
577 2710 7.713073 TGGGTTAAACAAACAAAATGGATCTTC 59.287 33.333 0.00 0.00 40.08 2.87
579 2712 9.974980 GGTTAAACAAACAAAATGGATCTTCTA 57.025 29.630 0.00 0.00 40.08 2.10
583 2716 9.480053 AAACAAACAAAATGGATCTTCTACATG 57.520 29.630 0.00 0.00 0.00 3.21
584 2717 7.092716 ACAAACAAAATGGATCTTCTACATGC 58.907 34.615 0.00 0.00 0.00 4.06
585 2718 5.490139 ACAAAATGGATCTTCTACATGCG 57.510 39.130 0.00 0.00 0.00 4.73
586 2719 5.185454 ACAAAATGGATCTTCTACATGCGA 58.815 37.500 0.00 0.00 0.00 5.10
588 2721 2.890808 TGGATCTTCTACATGCGACC 57.109 50.000 0.00 0.00 0.00 4.79
589 2722 2.107366 TGGATCTTCTACATGCGACCA 58.893 47.619 0.00 0.00 0.00 4.02
590 2723 2.101415 TGGATCTTCTACATGCGACCAG 59.899 50.000 0.00 0.00 0.00 4.00
603 2736 3.457198 GCGACCAGCTAGAACTTTTTC 57.543 47.619 0.00 0.00 44.04 2.29
604 2737 3.067833 GCGACCAGCTAGAACTTTTTCT 58.932 45.455 0.00 0.00 44.04 2.52
605 2738 3.498777 GCGACCAGCTAGAACTTTTTCTT 59.501 43.478 0.00 0.00 40.05 2.52
606 2739 4.377533 GCGACCAGCTAGAACTTTTTCTTC 60.378 45.833 0.00 0.00 40.05 2.87
607 2740 4.991687 CGACCAGCTAGAACTTTTTCTTCT 59.008 41.667 0.00 0.00 39.17 2.85
609 2742 5.685728 ACCAGCTAGAACTTTTTCTTCTGT 58.314 37.500 0.00 0.00 39.17 3.41
610 2743 6.122964 ACCAGCTAGAACTTTTTCTTCTGTT 58.877 36.000 0.00 0.00 39.17 3.16
611 2744 6.603599 ACCAGCTAGAACTTTTTCTTCTGTTT 59.396 34.615 0.00 1.91 39.17 2.83
612 2745 7.122799 ACCAGCTAGAACTTTTTCTTCTGTTTT 59.877 33.333 0.00 0.00 39.17 2.43
613 2746 7.433425 CCAGCTAGAACTTTTTCTTCTGTTTTG 59.567 37.037 0.00 0.00 39.17 2.44
614 2747 8.184192 CAGCTAGAACTTTTTCTTCTGTTTTGA 58.816 33.333 0.00 0.00 39.17 2.69
616 2749 8.799091 GCTAGAACTTTTTCTTCTGTTTTGAAC 58.201 33.333 0.00 0.00 39.17 3.18
617 2750 9.840427 CTAGAACTTTTTCTTCTGTTTTGAACA 57.160 29.630 0.00 0.00 39.17 3.18
618 2751 8.520835 AGAACTTTTTCTTCTGTTTTGAACAC 57.479 30.769 0.00 0.00 39.17 3.32
619 2752 6.927933 ACTTTTTCTTCTGTTTTGAACACG 57.072 33.333 0.00 0.00 36.25 4.49
621 2754 6.581166 ACTTTTTCTTCTGTTTTGAACACGTC 59.419 34.615 0.00 0.00 36.25 4.34
622 2755 5.614923 TTTCTTCTGTTTTGAACACGTCA 57.385 34.783 0.00 0.00 36.25 4.35
623 2756 5.811399 TTCTTCTGTTTTGAACACGTCAT 57.189 34.783 0.00 0.00 36.25 3.06
624 2757 5.403897 TCTTCTGTTTTGAACACGTCATC 57.596 39.130 0.00 0.00 36.25 2.92
626 2759 4.794248 TCTGTTTTGAACACGTCATCAG 57.206 40.909 0.00 0.00 36.25 2.90
627 2760 4.188462 TCTGTTTTGAACACGTCATCAGT 58.812 39.130 0.00 0.00 36.25 3.41
628 2761 4.033932 TCTGTTTTGAACACGTCATCAGTG 59.966 41.667 0.00 0.00 44.57 3.66
632 3105 3.452755 TGAACACGTCATCAGTGAACT 57.547 42.857 0.00 0.00 41.83 3.01
633 3106 4.577834 TGAACACGTCATCAGTGAACTA 57.422 40.909 0.00 0.00 41.83 2.24
636 3109 3.759418 ACACGTCATCAGTGAACTATCG 58.241 45.455 0.00 1.24 41.83 2.92
646 3119 1.471684 GTGAACTATCGTGACGACCCT 59.528 52.381 10.91 0.00 39.18 4.34
650 3123 1.092348 CTATCGTGACGACCCTGTCA 58.908 55.000 10.91 0.00 46.15 3.58
657 3130 3.868757 TGACGACCCTGTCAAAGATAG 57.131 47.619 0.00 0.00 45.40 2.08
658 3131 2.094182 TGACGACCCTGTCAAAGATAGC 60.094 50.000 0.00 0.00 45.40 2.97
659 3132 1.899814 ACGACCCTGTCAAAGATAGCA 59.100 47.619 0.00 0.00 32.09 3.49
660 3133 2.093973 ACGACCCTGTCAAAGATAGCAG 60.094 50.000 0.00 0.00 32.09 4.24
662 3135 2.237392 GACCCTGTCAAAGATAGCAGGT 59.763 50.000 8.39 0.00 45.08 4.00
663 3136 3.450904 ACCCTGTCAAAGATAGCAGGTA 58.549 45.455 8.39 0.00 45.08 3.08
665 3138 3.181461 CCCTGTCAAAGATAGCAGGTAGG 60.181 52.174 8.39 0.00 45.08 3.18
666 3139 3.452627 CCTGTCAAAGATAGCAGGTAGGT 59.547 47.826 0.00 0.00 42.47 3.08
667 3140 4.080863 CCTGTCAAAGATAGCAGGTAGGTT 60.081 45.833 0.00 0.00 42.47 3.50
668 3141 5.128827 CCTGTCAAAGATAGCAGGTAGGTTA 59.871 44.000 0.00 0.00 42.47 2.85
670 3143 5.041940 GTCAAAGATAGCAGGTAGGTTACG 58.958 45.833 0.00 0.00 0.00 3.18
671 3144 4.951715 TCAAAGATAGCAGGTAGGTTACGA 59.048 41.667 0.00 0.00 0.00 3.43
672 3145 5.067413 TCAAAGATAGCAGGTAGGTTACGAG 59.933 44.000 0.00 0.00 0.00 4.18
674 3147 2.133281 TAGCAGGTAGGTTACGAGCA 57.867 50.000 0.00 0.00 33.38 4.26
677 3150 1.067071 GCAGGTAGGTTACGAGCAAGT 60.067 52.381 0.00 0.00 31.93 3.16
678 3151 2.165030 GCAGGTAGGTTACGAGCAAGTA 59.835 50.000 0.00 0.00 31.93 2.24
679 3152 3.367703 GCAGGTAGGTTACGAGCAAGTAA 60.368 47.826 0.00 0.69 34.56 2.24
680 3153 4.679905 GCAGGTAGGTTACGAGCAAGTAAT 60.680 45.833 7.19 0.00 38.63 1.89
681 3154 4.804139 CAGGTAGGTTACGAGCAAGTAATG 59.196 45.833 7.19 0.00 38.63 1.90
699 3172 0.320858 TGCGATCTTTTGTGCCCGTA 60.321 50.000 0.00 0.00 0.00 4.02
704 3177 1.434555 TCTTTTGTGCCCGTACATCG 58.565 50.000 0.00 0.00 39.52 3.84
708 3181 2.144833 TTGTGCCCGTACATCGTCGT 62.145 55.000 0.00 0.00 37.94 4.34
722 3204 3.696782 GTCGTGACGTAGACAGCAT 57.303 52.632 4.40 0.00 37.34 3.79
724 3206 3.335786 GTCGTGACGTAGACAGCATAT 57.664 47.619 4.40 0.00 37.34 1.78
732 3214 5.126545 TGACGTAGACAGCATATGTTAAGGT 59.873 40.000 4.29 0.00 44.17 3.50
735 3217 5.687730 CGTAGACAGCATATGTTAAGGTCAG 59.312 44.000 4.29 0.00 44.17 3.51
736 3218 5.683876 AGACAGCATATGTTAAGGTCAGT 57.316 39.130 4.29 0.00 44.17 3.41
742 3224 8.537016 ACAGCATATGTTAAGGTCAGTTAAGTA 58.463 33.333 4.29 0.00 39.96 2.24
744 3226 9.379791 AGCATATGTTAAGGTCAGTTAAGTAAC 57.620 33.333 4.29 0.00 36.46 2.50
747 3229 7.974482 ATGTTAAGGTCAGTTAAGTAACCAC 57.026 36.000 5.38 0.00 36.88 4.16
751 3233 3.062042 GGTCAGTTAAGTAACCACGTGG 58.938 50.000 32.83 32.83 36.88 4.94
760 3242 2.028385 AGTAACCACGTGGGATCTTGTC 60.028 50.000 36.47 18.27 41.15 3.18
769 3251 2.486796 GGATCTTGTCCAAGCCAGC 58.513 57.895 2.09 0.00 46.96 4.85
770 3252 0.322816 GGATCTTGTCCAAGCCAGCA 60.323 55.000 2.09 0.00 46.96 4.41
772 3254 0.111061 ATCTTGTCCAAGCCAGCACA 59.889 50.000 2.09 0.00 38.28 4.57
774 3256 1.521450 CTTGTCCAAGCCAGCACAGG 61.521 60.000 0.00 0.00 0.00 4.00
775 3257 2.113986 GTCCAAGCCAGCACAGGT 59.886 61.111 0.00 0.00 0.00 4.00
776 3258 1.529244 GTCCAAGCCAGCACAGGTT 60.529 57.895 0.00 0.00 0.00 3.50
778 3260 0.476338 TCCAAGCCAGCACAGGTTAA 59.524 50.000 0.00 0.00 0.00 2.01
779 3261 0.883833 CCAAGCCAGCACAGGTTAAG 59.116 55.000 0.00 0.00 0.00 1.85
781 3263 1.808945 CAAGCCAGCACAGGTTAAGAG 59.191 52.381 0.00 0.00 0.00 2.85
782 3264 0.322008 AGCCAGCACAGGTTAAGAGC 60.322 55.000 0.00 0.00 0.00 4.09
783 3265 0.606401 GCCAGCACAGGTTAAGAGCA 60.606 55.000 0.00 0.00 0.00 4.26
784 3266 1.160137 CCAGCACAGGTTAAGAGCAC 58.840 55.000 0.00 0.00 0.00 4.40
786 3268 2.221169 CAGCACAGGTTAAGAGCACAA 58.779 47.619 0.00 0.00 0.00 3.33
787 3269 2.225019 CAGCACAGGTTAAGAGCACAAG 59.775 50.000 0.00 0.00 0.00 3.16
789 3271 2.618709 GCACAGGTTAAGAGCACAAGTT 59.381 45.455 0.00 0.00 0.00 2.66
790 3272 3.548818 GCACAGGTTAAGAGCACAAGTTG 60.549 47.826 0.00 0.00 0.00 3.16
791 3273 3.627577 CACAGGTTAAGAGCACAAGTTGT 59.372 43.478 1.64 1.64 0.00 3.32
793 3275 4.335594 ACAGGTTAAGAGCACAAGTTGTTC 59.664 41.667 5.57 0.74 35.71 3.18
794 3276 3.883489 AGGTTAAGAGCACAAGTTGTTCC 59.117 43.478 5.57 0.34 36.10 3.62
795 3277 3.630312 GGTTAAGAGCACAAGTTGTTCCA 59.370 43.478 5.57 0.00 36.10 3.53
796 3278 4.097286 GGTTAAGAGCACAAGTTGTTCCAA 59.903 41.667 5.57 0.00 36.10 3.53
798 3280 3.281727 AGAGCACAAGTTGTTCCAAGA 57.718 42.857 5.57 0.00 36.10 3.02
799 3281 3.209410 AGAGCACAAGTTGTTCCAAGAG 58.791 45.455 5.57 0.00 36.10 2.85
800 3282 3.118261 AGAGCACAAGTTGTTCCAAGAGA 60.118 43.478 5.57 0.00 36.10 3.10
803 3285 4.127171 GCACAAGTTGTTCCAAGAGACTA 58.873 43.478 5.57 0.00 0.00 2.59
804 3286 4.212214 GCACAAGTTGTTCCAAGAGACTAG 59.788 45.833 5.57 0.00 0.00 2.57
805 3287 4.212214 CACAAGTTGTTCCAAGAGACTAGC 59.788 45.833 5.57 0.00 0.00 3.42
806 3288 4.101741 ACAAGTTGTTCCAAGAGACTAGCT 59.898 41.667 1.64 0.00 0.00 3.32
807 3289 4.264460 AGTTGTTCCAAGAGACTAGCTG 57.736 45.455 0.00 0.00 0.00 4.24
809 3291 3.667497 TGTTCCAAGAGACTAGCTGTG 57.333 47.619 0.00 0.00 0.00 3.66
811 3293 2.300437 GTTCCAAGAGACTAGCTGTGGT 59.700 50.000 0.00 0.00 0.00 4.16
814 3296 2.564947 CCAAGAGACTAGCTGTGGTCTT 59.435 50.000 16.15 8.29 44.13 3.01
815 3297 3.583806 CAAGAGACTAGCTGTGGTCTTG 58.416 50.000 16.15 14.64 44.13 3.02
817 3299 2.560542 AGAGACTAGCTGTGGTCTTGTG 59.439 50.000 16.15 0.00 44.13 3.33
820 3302 0.038251 CTAGCTGTGGTCTTGTGCGA 60.038 55.000 0.00 0.00 0.00 5.10
821 3303 0.319555 TAGCTGTGGTCTTGTGCGAC 60.320 55.000 0.00 0.00 0.00 5.19
822 3304 2.943345 GCTGTGGTCTTGTGCGACG 61.943 63.158 0.00 0.00 34.75 5.12
823 3305 1.299850 CTGTGGTCTTGTGCGACGA 60.300 57.895 0.00 0.00 34.75 4.20
824 3306 1.548973 CTGTGGTCTTGTGCGACGAC 61.549 60.000 0.00 0.00 41.29 4.34
825 3307 1.590525 GTGGTCTTGTGCGACGACA 60.591 57.895 0.00 0.00 40.81 4.35
827 3309 2.645510 GGTCTTGTGCGACGACACG 61.646 63.158 14.58 7.44 43.74 4.49
829 3311 1.656263 TCTTGTGCGACGACACGAC 60.656 57.895 14.58 0.00 43.74 4.34
830 3312 2.645510 CTTGTGCGACGACACGACC 61.646 63.158 14.58 0.00 43.74 4.79
831 3313 3.128632 TTGTGCGACGACACGACCT 62.129 57.895 14.58 0.00 43.74 3.85
832 3314 2.354305 GTGCGACGACACGACCTT 60.354 61.111 0.00 0.00 35.09 3.50
833 3315 2.354188 TGCGACGACACGACCTTG 60.354 61.111 0.00 0.00 35.09 3.61
834 3316 3.103911 GCGACGACACGACCTTGG 61.104 66.667 0.00 0.00 35.09 3.61
835 3317 3.103911 CGACGACACGACCTTGGC 61.104 66.667 0.00 0.00 35.09 4.52
860 3342 4.157120 GCGTGGAGCCGTACCCAT 62.157 66.667 0.00 0.00 40.81 4.00
861 3343 2.202878 CGTGGAGCCGTACCCATG 60.203 66.667 0.00 0.00 34.58 3.66
862 3344 2.513897 GTGGAGCCGTACCCATGC 60.514 66.667 0.00 0.00 34.58 4.06
863 3345 4.155733 TGGAGCCGTACCCATGCG 62.156 66.667 0.00 0.00 0.00 4.73
869 3351 4.562425 CGTACCCATGCGCCCCAT 62.562 66.667 4.18 0.00 33.39 4.00
870 3352 2.594592 GTACCCATGCGCCCCATC 60.595 66.667 4.18 0.00 29.71 3.51
871 3353 4.248842 TACCCATGCGCCCCATCG 62.249 66.667 4.18 0.00 29.71 3.84
879 3361 2.592574 CGCCCCATCGCATCACAT 60.593 61.111 0.00 0.00 0.00 3.21
880 3362 2.900167 CGCCCCATCGCATCACATG 61.900 63.158 0.00 0.00 0.00 3.21
881 3363 2.558286 GCCCCATCGCATCACATGG 61.558 63.158 0.00 0.00 39.58 3.66
882 3364 1.152902 CCCCATCGCATCACATGGT 60.153 57.895 0.00 0.00 38.37 3.55
883 3365 1.449726 CCCCATCGCATCACATGGTG 61.450 60.000 0.00 0.00 38.37 4.17
884 3366 1.449726 CCCATCGCATCACATGGTGG 61.450 60.000 0.00 0.00 38.37 4.61
885 3367 1.357690 CATCGCATCACATGGTGGC 59.642 57.895 0.00 0.00 33.87 5.01
886 3368 1.077572 ATCGCATCACATGGTGGCA 60.078 52.632 0.00 0.00 33.87 4.92
887 3369 1.099295 ATCGCATCACATGGTGGCAG 61.099 55.000 0.00 0.00 33.87 4.85
888 3370 2.042259 CGCATCACATGGTGGCAGT 61.042 57.895 0.00 0.00 33.87 4.40
889 3371 1.509463 GCATCACATGGTGGCAGTG 59.491 57.895 0.00 0.00 33.87 3.66
890 3372 1.509463 CATCACATGGTGGCAGTGC 59.491 57.895 6.55 6.55 33.87 4.40
902 3384 2.203252 CAGTGCCACTGCCACACT 60.203 61.111 12.63 0.00 45.25 3.55
927 3409 2.995283 TCTTGACGAGGAATCGGAGTA 58.005 47.619 2.46 0.00 37.45 2.59
936 3418 4.679662 GAGGAATCGGAGTAAACGAATGA 58.320 43.478 0.00 0.00 44.20 2.57
937 3419 5.080969 AGGAATCGGAGTAAACGAATGAA 57.919 39.130 0.00 0.00 44.20 2.57
938 3420 5.671493 AGGAATCGGAGTAAACGAATGAAT 58.329 37.500 0.00 0.00 44.20 2.57
939 3421 6.812998 AGGAATCGGAGTAAACGAATGAATA 58.187 36.000 0.00 0.00 44.20 1.75
945 3435 5.170981 CGGAGTAAACGAATGAATACGAGTC 59.829 44.000 0.00 0.00 0.00 3.36
964 3455 6.918569 ACGAGTCATTATTAGATCAAACTCCG 59.081 38.462 0.00 0.00 30.58 4.63
965 3456 6.363626 CGAGTCATTATTAGATCAAACTCCGG 59.636 42.308 0.00 0.00 30.58 5.14
967 3458 5.179555 GTCATTATTAGATCAAACTCCGGCC 59.820 44.000 0.00 0.00 0.00 6.13
968 3459 2.640316 ATTAGATCAAACTCCGGCCC 57.360 50.000 0.00 0.00 0.00 5.80
969 3460 1.580059 TTAGATCAAACTCCGGCCCT 58.420 50.000 0.00 0.00 0.00 5.19
972 3463 0.462759 GATCAAACTCCGGCCCTCTG 60.463 60.000 0.00 0.00 0.00 3.35
1010 3501 3.607163 CCCAACAATGGCATCGCT 58.393 55.556 0.00 0.00 46.09 4.93
1011 3502 1.140161 CCCAACAATGGCATCGCTG 59.860 57.895 0.00 0.00 46.09 5.18
1012 3503 2.894240 CCCAACAATGGCATCGCTGC 62.894 60.000 1.78 1.78 46.09 5.25
1020 3511 2.823147 GCATCGCTGCCTTGCTCT 60.823 61.111 12.61 0.00 42.88 4.09
1036 3527 1.000270 TCTGCTCTCTTCCTCGCCT 60.000 57.895 0.00 0.00 0.00 5.52
1037 3528 0.613292 TCTGCTCTCTTCCTCGCCTT 60.613 55.000 0.00 0.00 0.00 4.35
1039 3530 1.813337 GCTCTCTTCCTCGCCTTGC 60.813 63.158 0.00 0.00 0.00 4.01
1047 3538 3.130160 CTCGCCTTGCTCCTTGCC 61.130 66.667 0.00 0.00 42.00 4.52
1054 3545 1.364626 CTTGCTCCTTGCCGTGCTAG 61.365 60.000 1.54 1.54 42.00 3.42
1055 3546 2.111999 TTGCTCCTTGCCGTGCTAGT 62.112 55.000 6.59 0.00 42.00 2.57
1056 3547 2.103042 GCTCCTTGCCGTGCTAGTG 61.103 63.158 6.59 1.99 35.15 2.74
1057 3548 2.047274 TCCTTGCCGTGCTAGTGC 60.047 61.111 6.59 0.00 40.20 4.40
1066 3557 2.429930 TGCTAGTGCACCACCACC 59.570 61.111 14.63 0.00 45.31 4.61
1067 3558 2.429930 GCTAGTGCACCACCACCA 59.570 61.111 14.63 0.00 39.41 4.17
1068 3559 1.672356 GCTAGTGCACCACCACCAG 60.672 63.158 14.63 0.87 39.41 4.00
1069 3560 1.672356 CTAGTGCACCACCACCAGC 60.672 63.158 14.63 0.00 36.38 4.85
1070 3561 3.190738 TAGTGCACCACCACCAGCC 62.191 63.158 14.63 0.00 36.38 4.85
1071 3562 4.892965 GTGCACCACCACCAGCCA 62.893 66.667 5.22 0.00 0.00 4.75
1072 3563 4.892965 TGCACCACCACCAGCCAC 62.893 66.667 0.00 0.00 0.00 5.01
1076 3567 4.579384 CCACCACCAGCCACGGTT 62.579 66.667 0.00 0.00 37.07 4.44
1077 3568 3.286751 CACCACCAGCCACGGTTG 61.287 66.667 0.00 0.00 37.07 3.77
1079 3570 4.954970 CCACCAGCCACGGTTGCT 62.955 66.667 0.12 0.12 37.07 3.91
1080 3571 3.357079 CACCAGCCACGGTTGCTC 61.357 66.667 3.40 0.00 37.07 4.26
1081 3572 4.988598 ACCAGCCACGGTTGCTCG 62.989 66.667 3.40 0.20 34.91 5.03
1082 3573 4.988598 CCAGCCACGGTTGCTCGT 62.989 66.667 3.40 0.00 44.91 4.18
1083 3574 2.048597 CAGCCACGGTTGCTCGTA 60.049 61.111 3.40 0.00 41.86 3.43
1084 3575 2.094659 CAGCCACGGTTGCTCGTAG 61.095 63.158 3.40 0.00 41.86 3.51
1085 3576 3.488090 GCCACGGTTGCTCGTAGC 61.488 66.667 0.00 3.35 41.86 3.58
1086 3577 2.813908 CCACGGTTGCTCGTAGCC 60.814 66.667 4.73 0.00 41.51 3.93
1312 3806 3.423154 GGTTCGCCAAGCAGTCGG 61.423 66.667 0.00 0.00 37.19 4.79
1313 3807 3.423154 GTTCGCCAAGCAGTCGGG 61.423 66.667 0.00 0.00 0.00 5.14
1314 3808 3.936203 TTCGCCAAGCAGTCGGGT 61.936 61.111 0.00 0.00 0.00 5.28
1362 3856 4.379243 CAGTCCGGCCTCAGCGTT 62.379 66.667 0.00 0.00 41.24 4.84
1367 3861 4.430765 CGGCCTCAGCGTTACGGT 62.431 66.667 2.83 2.83 41.24 4.83
1424 3924 2.477176 GCAACCGTGTGCTGTGGAA 61.477 57.895 0.55 0.00 41.51 3.53
1447 3947 1.338136 GCCGATCCCCCTCTTCAAGA 61.338 60.000 0.00 0.00 0.00 3.02
1544 4047 2.656069 GGGCGAGCTTCTGGTACCA 61.656 63.158 15.39 15.39 0.00 3.25
1580 4083 2.843545 GGGCCAGTCCTTGACCAA 59.156 61.111 4.39 0.00 29.37 3.67
1611 4114 2.066393 CCGGGGGAAGCTCATCTCA 61.066 63.158 0.00 0.00 0.00 3.27
1783 4286 1.733399 GTGACCTTCGACGACCAGC 60.733 63.158 0.00 0.00 0.00 4.85
1834 4337 0.385751 CGTCCACAGCCTGATATCGT 59.614 55.000 0.00 0.00 0.00 3.73
1838 4341 0.941463 CACAGCCTGATATCGTCGGC 60.941 60.000 17.88 17.88 42.81 5.54
1840 4343 3.106407 GCCTGATATCGTCGGCGC 61.106 66.667 3.52 0.00 37.00 6.53
1841 4344 2.645567 CCTGATATCGTCGGCGCT 59.354 61.111 3.52 0.00 38.14 5.92
1911 4417 2.348104 TGTCGTCCGTGCCTATGCT 61.348 57.895 0.00 0.00 38.71 3.79
1928 4434 2.202946 TCGTGCCAAGAACGTGCA 60.203 55.556 0.00 0.00 41.70 4.57
1990 4499 4.799473 CCAGCGACGCATGCAACG 62.799 66.667 23.70 22.98 33.85 4.10
1991 4500 4.799473 CAGCGACGCATGCAACGG 62.799 66.667 26.34 11.30 34.00 4.44
2159 4671 2.125912 CTGCGACGGGGAGAACAG 60.126 66.667 0.00 0.00 35.87 3.16
2257 4769 3.147595 CGGAGGATCAGTGCCGGA 61.148 66.667 5.05 0.00 40.08 5.14
2260 4772 1.153349 GAGGATCAGTGCCGGAACC 60.153 63.158 9.68 0.00 33.17 3.62
2303 4815 3.264159 CGCCGCGCTGATGATCAA 61.264 61.111 5.56 0.00 0.00 2.57
2310 4822 0.179100 CGCTGATGATCAACGGGACT 60.179 55.000 10.16 0.00 32.85 3.85
2313 4825 2.484417 GCTGATGATCAACGGGACTGAT 60.484 50.000 13.16 0.00 36.21 2.90
2319 4831 3.118454 AACGGGACTGATTGCGCG 61.118 61.111 0.00 0.00 44.59 6.86
2523 5050 3.070302 ACCTGACCAAGAAGAACAGAGAC 59.930 47.826 0.00 0.00 0.00 3.36
2525 5052 4.443457 CCTGACCAAGAAGAACAGAGACAA 60.443 45.833 0.00 0.00 0.00 3.18
2940 5495 1.524002 CTCCCCGATCATGCACTGT 59.476 57.895 0.00 0.00 0.00 3.55
3489 6076 6.368791 TCGTGTCTTCTGTTTGATTAGATTGG 59.631 38.462 0.00 0.00 0.00 3.16
3537 6170 2.484417 CCAACCATCCATCTCTTCCTCG 60.484 54.545 0.00 0.00 0.00 4.63
3542 6175 3.386078 CCATCCATCTCTTCCTCGAAAGA 59.614 47.826 0.00 0.00 39.12 2.52
3543 6176 4.141846 CCATCCATCTCTTCCTCGAAAGAA 60.142 45.833 1.47 0.00 41.32 2.52
3547 6180 4.390297 CCATCTCTTCCTCGAAAGAACAAC 59.610 45.833 1.47 0.00 41.32 3.32
3548 6181 4.665833 TCTCTTCCTCGAAAGAACAACA 57.334 40.909 1.47 0.00 41.32 3.33
3571 6247 2.561419 GGATATGAGCAACCGTAGCCTA 59.439 50.000 0.00 0.00 32.77 3.93
3597 6273 3.638160 CCCTATGGCAGTATTGTGCAATT 59.362 43.478 2.56 0.00 45.93 2.32
3611 6287 9.040939 GTATTGTGCAATTTACTCTTTTGGTTT 57.959 29.630 2.56 0.00 32.50 3.27
3632 6308 7.040755 TGGTTTTACAGTAGTTCCATCATGTTG 60.041 37.037 0.00 0.00 0.00 3.33
3714 6390 8.616076 AGCAATAAACTAGCTTCACATATGTTC 58.384 33.333 5.37 0.00 34.37 3.18
3720 6396 4.292186 AGCTTCACATATGTTCCACACT 57.708 40.909 5.37 0.00 0.00 3.55
3747 6423 7.425224 TTTTTCCCAAAATGTCTTCAACCTA 57.575 32.000 0.00 0.00 0.00 3.08
3750 6426 6.648879 TCCCAAAATGTCTTCAACCTAAAG 57.351 37.500 0.00 0.00 0.00 1.85
3752 6428 5.221422 CCCAAAATGTCTTCAACCTAAAGCA 60.221 40.000 0.00 0.00 0.00 3.91
3756 6432 9.474920 CAAAATGTCTTCAACCTAAAGCATTTA 57.525 29.630 13.43 0.00 40.09 1.40
3812 6492 9.226345 CAAACTCTCTGAACATTGTTTAAGTTC 57.774 33.333 3.08 0.00 41.42 3.01
3853 6533 0.245539 CTGGCCTTTTGTGCATGGAG 59.754 55.000 3.32 0.00 0.00 3.86
3859 6539 3.193267 GCCTTTTGTGCATGGAGATGTAA 59.807 43.478 0.00 0.00 31.50 2.41
3869 6549 3.695830 TGGAGATGTAACTGTCCCAAC 57.304 47.619 0.00 0.00 0.00 3.77
3870 6550 2.976185 TGGAGATGTAACTGTCCCAACA 59.024 45.455 0.00 0.00 0.00 3.33
3872 6552 4.141367 TGGAGATGTAACTGTCCCAACAAA 60.141 41.667 0.00 0.00 34.24 2.83
3873 6553 4.455877 GGAGATGTAACTGTCCCAACAAAG 59.544 45.833 0.00 0.00 34.24 2.77
3874 6554 5.048846 AGATGTAACTGTCCCAACAAAGT 57.951 39.130 0.00 0.00 34.24 2.66
3875 6555 6.182507 AGATGTAACTGTCCCAACAAAGTA 57.817 37.500 0.00 0.00 34.24 2.24
3876 6556 6.231211 AGATGTAACTGTCCCAACAAAGTAG 58.769 40.000 0.00 0.00 34.24 2.57
3877 6557 4.131596 TGTAACTGTCCCAACAAAGTAGC 58.868 43.478 0.00 0.00 34.24 3.58
3936 6915 4.330347 GGAACTCTAAATCCACGAAGAAGC 59.670 45.833 0.00 0.00 35.71 3.86
3966 6945 6.292061 CGAAATTCGTTTGATTTGGCTTTTGA 60.292 34.615 7.29 0.00 34.72 2.69
3967 6946 7.495135 AAATTCGTTTGATTTGGCTTTTGAT 57.505 28.000 0.00 0.00 0.00 2.57
3969 6948 8.776376 AATTCGTTTGATTTGGCTTTTGATAT 57.224 26.923 0.00 0.00 0.00 1.63
3971 6950 8.682128 TTCGTTTGATTTGGCTTTTGATATAC 57.318 30.769 0.00 0.00 0.00 1.47
3972 6951 6.964370 TCGTTTGATTTGGCTTTTGATATACG 59.036 34.615 0.00 0.00 0.00 3.06
3974 6953 7.906010 CGTTTGATTTGGCTTTTGATATACGTA 59.094 33.333 0.00 0.00 0.00 3.57
3975 6954 9.221775 GTTTGATTTGGCTTTTGATATACGTAG 57.778 33.333 0.08 0.00 0.00 3.51
3976 6955 6.954944 TGATTTGGCTTTTGATATACGTAGC 58.045 36.000 0.08 0.00 0.00 3.58
3977 6956 5.398176 TTTGGCTTTTGATATACGTAGCG 57.602 39.130 0.08 0.00 0.00 4.26
3978 6957 4.049546 TGGCTTTTGATATACGTAGCGT 57.950 40.909 0.08 0.00 44.35 5.07
3983 6962 3.703286 TTGATATACGTAGCGTGCAGT 57.297 42.857 0.08 0.00 41.39 4.40
3984 6963 3.703286 TGATATACGTAGCGTGCAGTT 57.297 42.857 0.08 0.00 41.39 3.16
3985 6964 3.624900 TGATATACGTAGCGTGCAGTTC 58.375 45.455 0.08 0.00 41.39 3.01
3986 6965 2.480224 TATACGTAGCGTGCAGTTCC 57.520 50.000 0.08 0.00 41.39 3.62
3988 6967 0.387622 TACGTAGCGTGCAGTTCCAC 60.388 55.000 4.32 0.00 41.39 4.02
3994 6973 3.712881 GTGCAGTTCCACGCGACC 61.713 66.667 15.93 0.00 0.00 4.79
3995 6974 4.228567 TGCAGTTCCACGCGACCA 62.229 61.111 15.93 0.00 0.00 4.02
3996 6975 2.970324 GCAGTTCCACGCGACCAA 60.970 61.111 15.93 0.00 0.00 3.67
3997 6976 2.325082 GCAGTTCCACGCGACCAAT 61.325 57.895 15.93 0.00 0.00 3.16
3998 6977 1.852067 GCAGTTCCACGCGACCAATT 61.852 55.000 15.93 0.00 0.00 2.32
3999 6978 0.165944 CAGTTCCACGCGACCAATTC 59.834 55.000 15.93 0.00 0.00 2.17
4010 6989 2.324477 CCAATTCGATCCGTGCGC 59.676 61.111 0.00 0.00 0.00 6.09
4011 6990 2.324477 CAATTCGATCCGTGCGCC 59.676 61.111 4.18 0.00 0.00 6.53
4013 6992 1.449601 AATTCGATCCGTGCGCCTT 60.450 52.632 4.18 0.00 0.00 4.35
4014 6993 1.024579 AATTCGATCCGTGCGCCTTT 61.025 50.000 4.18 0.00 0.00 3.11
4015 6994 1.705337 ATTCGATCCGTGCGCCTTTG 61.705 55.000 4.18 0.00 0.00 2.77
4016 6995 4.520846 CGATCCGTGCGCCTTTGC 62.521 66.667 4.18 0.00 0.00 3.68
4017 6996 3.127533 GATCCGTGCGCCTTTGCT 61.128 61.111 4.18 0.00 35.36 3.91
4018 6997 3.386867 GATCCGTGCGCCTTTGCTG 62.387 63.158 4.18 0.00 35.36 4.41
4021 7000 3.047280 CGTGCGCCTTTGCTGGTA 61.047 61.111 4.18 0.00 35.36 3.25
4022 7001 2.561373 GTGCGCCTTTGCTGGTAC 59.439 61.111 4.18 0.00 35.36 3.34
4023 7002 3.047280 TGCGCCTTTGCTGGTACG 61.047 61.111 4.18 0.00 35.36 3.67
4025 7004 4.147322 CGCCTTTGCTGGTACGCG 62.147 66.667 3.53 3.53 34.43 6.01
4056 7359 0.038251 CTGGTCGTTCAGTGCAGCTA 60.038 55.000 0.00 0.00 0.00 3.32
4059 7362 0.319555 GTCGTTCAGTGCAGCTACCA 60.320 55.000 0.00 0.00 0.00 3.25
4067 7394 0.890683 GTGCAGCTACCATTGCCTTT 59.109 50.000 0.00 0.00 39.54 3.11
4137 7464 4.475135 GGCAAGCGGGAGAGGGAC 62.475 72.222 0.00 0.00 0.00 4.46
4138 7465 3.706373 GCAAGCGGGAGAGGGACA 61.706 66.667 0.00 0.00 0.00 4.02
4160 7500 3.075005 GCCCTGCCTCTCGTACCA 61.075 66.667 0.00 0.00 0.00 3.25
4350 7755 1.666234 TGCATTGCACGTACAGCGA 60.666 52.632 7.38 0.18 44.82 4.93
4351 7756 1.225745 GCATTGCACGTACAGCGAC 60.226 57.895 3.15 0.00 44.77 5.19
4352 7757 1.896339 GCATTGCACGTACAGCGACA 61.896 55.000 3.15 0.00 44.77 4.35
4353 7758 0.093535 CATTGCACGTACAGCGACAG 59.906 55.000 0.00 0.00 44.77 3.51
4354 7759 0.319555 ATTGCACGTACAGCGACAGT 60.320 50.000 0.00 0.00 44.77 3.55
4355 7760 0.311477 TTGCACGTACAGCGACAGTA 59.689 50.000 0.00 0.00 44.77 2.74
4356 7761 0.109919 TGCACGTACAGCGACAGTAG 60.110 55.000 0.00 0.00 44.77 2.57
4357 7762 0.797249 GCACGTACAGCGACAGTAGG 60.797 60.000 0.00 0.00 44.77 3.18
4358 7763 0.520404 CACGTACAGCGACAGTAGGT 59.480 55.000 0.00 0.00 44.77 3.08
4359 7764 0.801251 ACGTACAGCGACAGTAGGTC 59.199 55.000 0.00 0.00 44.77 3.85
4360 7765 0.098376 CGTACAGCGACAGTAGGTCC 59.902 60.000 0.00 0.00 43.95 4.46
4361 7766 0.098376 GTACAGCGACAGTAGGTCCG 59.902 60.000 0.00 0.00 43.95 4.79
4362 7767 0.321919 TACAGCGACAGTAGGTCCGT 60.322 55.000 0.00 0.00 43.95 4.69
4363 7768 0.321919 ACAGCGACAGTAGGTCCGTA 60.322 55.000 0.00 0.00 43.95 4.02
4364 7769 1.022735 CAGCGACAGTAGGTCCGTAT 58.977 55.000 0.00 0.00 43.95 3.06
4365 7770 1.022735 AGCGACAGTAGGTCCGTATG 58.977 55.000 0.00 0.00 43.95 2.39
4366 7771 0.030369 GCGACAGTAGGTCCGTATGG 59.970 60.000 0.00 0.00 43.95 2.74
4367 7772 0.666913 CGACAGTAGGTCCGTATGGG 59.333 60.000 0.00 0.00 43.95 4.00
4368 7773 1.748244 CGACAGTAGGTCCGTATGGGA 60.748 57.143 0.00 0.00 43.95 4.37
4386 7791 1.273886 GGACACTGACCCTGAGTCTTC 59.726 57.143 0.00 0.00 46.46 2.87
4390 7795 1.431243 ACTGACCCTGAGTCTTCTCCT 59.569 52.381 0.00 0.00 46.46 3.69
4392 7797 0.534873 GACCCTGAGTCTTCTCCTGC 59.465 60.000 0.00 0.00 42.69 4.85
4449 7921 4.087079 CACGACGAACACGACGCG 62.087 66.667 3.53 3.53 45.13 6.01
4451 7923 3.381212 CGACGAACACGACGCGTT 61.381 61.111 15.53 0.00 38.32 4.84
4452 7924 2.068716 CGACGAACACGACGCGTTA 61.069 57.895 15.53 0.00 38.32 3.18
4454 7926 0.289981 GACGAACACGACGCGTTATC 59.710 55.000 15.53 6.90 38.32 1.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 4.323477 CGCCTTTCCCACCGTCCA 62.323 66.667 0.00 0.00 0.00 4.02
11 12 2.593436 ACAACGCCTTTCCCACCG 60.593 61.111 0.00 0.00 0.00 4.94
13 14 0.310854 CTTGACAACGCCTTTCCCAC 59.689 55.000 0.00 0.00 0.00 4.61
19 20 3.502211 CCATAGAAACTTGACAACGCCTT 59.498 43.478 0.00 0.00 0.00 4.35
23 24 6.898041 TGAATTCCATAGAAACTTGACAACG 58.102 36.000 2.27 0.00 35.09 4.10
30 31 9.178758 GTACTCCAATGAATTCCATAGAAACTT 57.821 33.333 2.27 0.00 35.09 2.66
36 37 6.488006 CCCAAGTACTCCAATGAATTCCATAG 59.512 42.308 2.27 0.00 34.45 2.23
164 174 5.178996 CACATCATTGAGTAGCCTCATAAGC 59.821 44.000 0.00 0.00 46.80 3.09
172 182 2.843701 CTCCCACATCATTGAGTAGCC 58.156 52.381 0.00 0.00 0.00 3.93
193 203 6.743575 AATTACCGAGGATTTTCTGAAGTG 57.256 37.500 0.00 0.00 0.00 3.16
231 241 7.164230 ACAAACATTTACAAGGTTCAGTCAA 57.836 32.000 0.00 0.00 33.79 3.18
233 243 7.378728 GCTAACAAACATTTACAAGGTTCAGTC 59.621 37.037 0.00 0.00 33.79 3.51
250 260 2.287608 GGTCAACTGCTGGCTAACAAAC 60.288 50.000 0.00 0.00 0.00 2.93
255 265 0.107831 AACGGTCAACTGCTGGCTAA 59.892 50.000 0.00 0.00 0.00 3.09
268 278 0.799534 ACGTGCGTGCTATAACGGTC 60.800 55.000 7.25 0.00 43.75 4.79
272 282 1.197910 GAGGACGTGCGTGCTATAAC 58.802 55.000 17.93 3.16 46.60 1.89
282 292 4.373116 TCCAAGCCGAGGACGTGC 62.373 66.667 0.00 0.00 37.88 5.34
283 293 2.125912 CTCCAAGCCGAGGACGTG 60.126 66.667 0.00 0.00 37.88 4.49
290 300 2.032528 CAGCAACCTCCAAGCCGA 59.967 61.111 0.00 0.00 0.00 5.54
291 301 3.741476 GCAGCAACCTCCAAGCCG 61.741 66.667 0.00 0.00 0.00 5.52
374 434 5.220586 CGGTGTGGACATGTTATAATGTGTC 60.221 44.000 17.96 17.96 40.87 3.67
375 435 4.634004 CGGTGTGGACATGTTATAATGTGT 59.366 41.667 0.00 5.65 40.87 3.72
376 436 4.035091 CCGGTGTGGACATGTTATAATGTG 59.965 45.833 0.00 0.00 40.87 3.21
380 440 2.838813 TCCCGGTGTGGACATGTTATAA 59.161 45.455 0.00 0.00 42.00 0.98
381 441 2.468915 TCCCGGTGTGGACATGTTATA 58.531 47.619 0.00 0.00 42.00 0.98
382 442 1.281419 TCCCGGTGTGGACATGTTAT 58.719 50.000 0.00 0.00 42.00 1.89
383 443 1.208535 GATCCCGGTGTGGACATGTTA 59.791 52.381 0.00 0.00 42.00 2.41
384 444 0.035439 GATCCCGGTGTGGACATGTT 60.035 55.000 0.00 0.00 42.00 2.71
385 445 1.602237 GATCCCGGTGTGGACATGT 59.398 57.895 0.00 0.00 42.00 3.21
386 446 1.521457 CGATCCCGGTGTGGACATG 60.521 63.158 0.00 0.00 42.00 3.21
397 457 0.037697 TTGACTGTTCACCGATCCCG 60.038 55.000 0.00 0.00 0.00 5.14
398 458 1.275291 TCTTGACTGTTCACCGATCCC 59.725 52.381 0.00 0.00 0.00 3.85
400 460 5.168569 TGTTATCTTGACTGTTCACCGATC 58.831 41.667 0.00 0.00 0.00 3.69
402 462 4.594123 TGTTATCTTGACTGTTCACCGA 57.406 40.909 0.00 0.00 0.00 4.69
403 463 4.093408 CCATGTTATCTTGACTGTTCACCG 59.907 45.833 0.00 0.00 0.00 4.94
404 464 5.003804 ACCATGTTATCTTGACTGTTCACC 58.996 41.667 0.00 0.00 0.00 4.02
405 465 5.470098 ACACCATGTTATCTTGACTGTTCAC 59.530 40.000 0.00 0.00 0.00 3.18
407 467 6.428159 AGAACACCATGTTATCTTGACTGTTC 59.572 38.462 14.52 14.52 41.28 3.18
408 468 6.299141 AGAACACCATGTTATCTTGACTGTT 58.701 36.000 0.00 0.00 41.28 3.16
409 469 5.869579 AGAACACCATGTTATCTTGACTGT 58.130 37.500 0.00 0.00 41.28 3.55
410 470 7.099764 AGTAGAACACCATGTTATCTTGACTG 58.900 38.462 0.00 0.00 41.28 3.51
411 471 7.246171 AGTAGAACACCATGTTATCTTGACT 57.754 36.000 0.00 0.00 41.28 3.41
412 472 7.707035 CCTAGTAGAACACCATGTTATCTTGAC 59.293 40.741 0.00 0.00 41.28 3.18
413 473 7.399191 ACCTAGTAGAACACCATGTTATCTTGA 59.601 37.037 0.00 0.00 41.28 3.02
414 474 7.492669 CACCTAGTAGAACACCATGTTATCTTG 59.507 40.741 0.00 0.00 41.28 3.02
416 476 6.895756 TCACCTAGTAGAACACCATGTTATCT 59.104 38.462 0.00 0.00 41.28 1.98
417 477 6.979238 GTCACCTAGTAGAACACCATGTTATC 59.021 42.308 0.00 0.00 41.28 1.75
418 478 6.668283 AGTCACCTAGTAGAACACCATGTTAT 59.332 38.462 0.00 0.00 41.28 1.89
419 479 6.014647 AGTCACCTAGTAGAACACCATGTTA 58.985 40.000 0.00 0.00 41.28 2.41
431 722 5.009710 TGTTGACTGTTCAGTCACCTAGTAG 59.990 44.000 28.01 0.00 46.98 2.57
433 724 3.704566 TGTTGACTGTTCAGTCACCTAGT 59.295 43.478 28.01 0.00 46.98 2.57
440 736 6.365247 ACACGTTATATGTTGACTGTTCAGTC 59.635 38.462 21.57 21.57 39.15 3.51
456 752 3.133362 GGGGAAGGATCACACACGTTATA 59.867 47.826 0.00 0.00 0.00 0.98
459 755 0.036306 GGGGAAGGATCACACACGTT 59.964 55.000 0.00 0.00 0.00 3.99
462 758 0.322546 GGTGGGGAAGGATCACACAC 60.323 60.000 0.00 0.00 36.96 3.82
463 759 1.497309 GGGTGGGGAAGGATCACACA 61.497 60.000 0.00 0.00 36.96 3.72
464 760 1.208165 AGGGTGGGGAAGGATCACAC 61.208 60.000 0.00 0.00 35.47 3.82
466 762 0.704664 AAAGGGTGGGGAAGGATCAC 59.295 55.000 0.00 0.00 0.00 3.06
468 764 0.259065 GGAAAGGGTGGGGAAGGATC 59.741 60.000 0.00 0.00 0.00 3.36
469 765 0.479589 TGGAAAGGGTGGGGAAGGAT 60.480 55.000 0.00 0.00 0.00 3.24
471 767 0.033109 GATGGAAAGGGTGGGGAAGG 60.033 60.000 0.00 0.00 0.00 3.46
472 768 1.002857 AGATGGAAAGGGTGGGGAAG 58.997 55.000 0.00 0.00 0.00 3.46
473 769 0.704076 CAGATGGAAAGGGTGGGGAA 59.296 55.000 0.00 0.00 0.00 3.97
475 771 1.380380 GCAGATGGAAAGGGTGGGG 60.380 63.158 0.00 0.00 0.00 4.96
476 772 0.682209 CTGCAGATGGAAAGGGTGGG 60.682 60.000 8.42 0.00 0.00 4.61
479 775 2.893489 GTTTTCTGCAGATGGAAAGGGT 59.107 45.455 19.04 0.00 33.77 4.34
492 2168 2.003301 GAGTCTCCGGATGTTTTCTGC 58.997 52.381 3.57 0.00 0.00 4.26
493 2169 2.622436 GGAGTCTCCGGATGTTTTCTG 58.378 52.381 3.57 0.00 0.00 3.02
494 2170 1.555533 GGGAGTCTCCGGATGTTTTCT 59.444 52.381 12.91 0.00 37.43 2.52
498 2174 0.252284 ACAGGGAGTCTCCGGATGTT 60.252 55.000 12.91 0.00 37.43 2.71
501 2177 1.279271 CAAAACAGGGAGTCTCCGGAT 59.721 52.381 12.91 0.00 37.43 4.18
503 2179 0.955919 GCAAAACAGGGAGTCTCCGG 60.956 60.000 12.91 9.90 37.43 5.14
507 2183 0.759346 AGACGCAAAACAGGGAGTCT 59.241 50.000 0.00 0.00 38.98 3.24
508 2184 2.067013 GTAGACGCAAAACAGGGAGTC 58.933 52.381 0.00 0.00 34.57 3.36
509 2185 1.270678 GGTAGACGCAAAACAGGGAGT 60.271 52.381 0.00 0.00 0.00 3.85
511 2187 0.035739 GGGTAGACGCAAAACAGGGA 59.964 55.000 0.00 0.00 0.00 4.20
512 2188 1.296056 CGGGTAGACGCAAAACAGGG 61.296 60.000 0.00 0.00 0.00 4.45
513 2189 0.601841 ACGGGTAGACGCAAAACAGG 60.602 55.000 0.00 0.00 37.37 4.00
514 2190 1.990563 CTACGGGTAGACGCAAAACAG 59.009 52.381 0.00 0.00 37.37 3.16
515 2191 1.936203 GCTACGGGTAGACGCAAAACA 60.936 52.381 9.94 0.00 37.37 2.83
516 2192 0.717784 GCTACGGGTAGACGCAAAAC 59.282 55.000 9.94 0.00 37.37 2.43
517 2193 0.317799 TGCTACGGGTAGACGCAAAA 59.682 50.000 9.94 0.00 37.37 2.44
521 2197 0.179119 AACATGCTACGGGTAGACGC 60.179 55.000 9.94 0.00 37.37 5.19
522 2198 1.133598 TCAACATGCTACGGGTAGACG 59.866 52.381 9.94 0.07 35.21 4.18
523 2199 2.537401 GTCAACATGCTACGGGTAGAC 58.463 52.381 9.94 2.40 35.21 2.59
524 2200 1.479323 GGTCAACATGCTACGGGTAGA 59.521 52.381 9.94 0.00 35.21 2.59
525 2201 1.801395 CGGTCAACATGCTACGGGTAG 60.801 57.143 1.45 1.45 36.29 3.18
526 2202 0.173935 CGGTCAACATGCTACGGGTA 59.826 55.000 0.00 0.00 0.00 3.69
527 2203 1.079405 CGGTCAACATGCTACGGGT 60.079 57.895 0.00 0.00 0.00 5.28
529 2205 1.019278 AAGCGGTCAACATGCTACGG 61.019 55.000 0.00 0.00 38.17 4.02
530 2206 0.370273 GAAGCGGTCAACATGCTACG 59.630 55.000 0.00 0.00 38.17 3.51
531 2207 0.727398 GGAAGCGGTCAACATGCTAC 59.273 55.000 0.00 0.00 38.17 3.58
533 2209 0.957395 CAGGAAGCGGTCAACATGCT 60.957 55.000 0.00 0.00 41.60 3.79
534 2210 1.503542 CAGGAAGCGGTCAACATGC 59.496 57.895 0.00 0.00 0.00 4.06
536 2212 1.002134 CCCAGGAAGCGGTCAACAT 60.002 57.895 0.00 0.00 0.00 2.71
538 2214 0.035739 TAACCCAGGAAGCGGTCAAC 59.964 55.000 0.00 0.00 0.00 3.18
544 2677 2.359531 TGTTTGTTTAACCCAGGAAGCG 59.640 45.455 0.00 0.00 35.81 4.68
546 2679 6.259829 CCATTTTGTTTGTTTAACCCAGGAAG 59.740 38.462 0.00 0.00 35.81 3.46
547 2680 6.070194 TCCATTTTGTTTGTTTAACCCAGGAA 60.070 34.615 0.00 0.00 35.81 3.36
552 2685 7.931407 AGAAGATCCATTTTGTTTGTTTAACCC 59.069 33.333 0.00 0.00 35.81 4.11
559 2692 7.092716 GCATGTAGAAGATCCATTTTGTTTGT 58.907 34.615 0.00 0.00 0.00 2.83
560 2693 6.252015 CGCATGTAGAAGATCCATTTTGTTTG 59.748 38.462 0.00 0.00 0.00 2.93
564 2697 5.504665 GGTCGCATGTAGAAGATCCATTTTG 60.505 44.000 0.00 0.00 0.00 2.44
568 2701 2.700371 TGGTCGCATGTAGAAGATCCAT 59.300 45.455 0.00 0.00 0.00 3.41
570 2703 2.748605 CTGGTCGCATGTAGAAGATCC 58.251 52.381 0.00 0.00 0.00 3.36
571 2704 2.131183 GCTGGTCGCATGTAGAAGATC 58.869 52.381 0.00 0.00 38.92 2.75
572 2705 1.759445 AGCTGGTCGCATGTAGAAGAT 59.241 47.619 0.00 0.00 42.61 2.40
573 2706 1.186200 AGCTGGTCGCATGTAGAAGA 58.814 50.000 0.00 0.00 42.61 2.87
575 2708 2.375146 TCTAGCTGGTCGCATGTAGAA 58.625 47.619 0.00 0.00 42.61 2.10
577 2710 2.099921 AGTTCTAGCTGGTCGCATGTAG 59.900 50.000 0.00 0.00 42.61 2.74
579 2712 0.898320 AGTTCTAGCTGGTCGCATGT 59.102 50.000 0.00 0.00 42.61 3.21
580 2713 2.015736 AAGTTCTAGCTGGTCGCATG 57.984 50.000 0.00 0.00 42.61 4.06
581 2714 2.770164 AAAGTTCTAGCTGGTCGCAT 57.230 45.000 0.00 0.00 42.61 4.73
582 2715 2.543777 AAAAGTTCTAGCTGGTCGCA 57.456 45.000 0.00 0.00 42.61 5.10
583 2716 3.067833 AGAAAAAGTTCTAGCTGGTCGC 58.932 45.455 0.00 0.00 42.53 5.19
584 2717 4.991687 AGAAGAAAAAGTTCTAGCTGGTCG 59.008 41.667 0.00 0.00 43.59 4.79
585 2718 5.760743 ACAGAAGAAAAAGTTCTAGCTGGTC 59.239 40.000 16.82 0.00 43.59 4.02
586 2719 5.685728 ACAGAAGAAAAAGTTCTAGCTGGT 58.314 37.500 16.82 0.00 43.59 4.00
588 2721 8.184192 TCAAAACAGAAGAAAAAGTTCTAGCTG 58.816 33.333 0.00 13.43 43.59 4.24
589 2722 8.281212 TCAAAACAGAAGAAAAAGTTCTAGCT 57.719 30.769 0.00 0.00 43.59 3.32
590 2723 8.799091 GTTCAAAACAGAAGAAAAAGTTCTAGC 58.201 33.333 0.00 0.00 43.59 3.42
591 2724 9.840427 TGTTCAAAACAGAAGAAAAAGTTCTAG 57.160 29.630 0.00 0.00 38.69 2.43
593 2726 7.326063 CGTGTTCAAAACAGAAGAAAAAGTTCT 59.674 33.333 0.00 0.00 43.36 3.01
594 2727 7.114388 ACGTGTTCAAAACAGAAGAAAAAGTTC 59.886 33.333 0.00 0.00 43.10 3.01
595 2728 6.921307 ACGTGTTCAAAACAGAAGAAAAAGTT 59.079 30.769 0.00 0.00 43.10 2.66
596 2729 6.443792 ACGTGTTCAAAACAGAAGAAAAAGT 58.556 32.000 0.00 0.00 43.10 2.66
597 2730 6.580791 TGACGTGTTCAAAACAGAAGAAAAAG 59.419 34.615 0.00 0.00 43.10 2.27
599 2732 6.003234 TGACGTGTTCAAAACAGAAGAAAA 57.997 33.333 0.00 0.00 43.10 2.29
603 2736 5.155509 TGATGACGTGTTCAAAACAGAAG 57.844 39.130 0.00 0.00 43.10 2.85
604 2737 4.634004 ACTGATGACGTGTTCAAAACAGAA 59.366 37.500 0.00 0.00 43.10 3.02
605 2738 4.033932 CACTGATGACGTGTTCAAAACAGA 59.966 41.667 0.00 0.00 43.10 3.41
606 2739 4.033932 TCACTGATGACGTGTTCAAAACAG 59.966 41.667 0.00 0.00 43.10 3.16
607 2740 3.935828 TCACTGATGACGTGTTCAAAACA 59.064 39.130 0.00 0.00 37.92 2.83
609 2742 4.634004 AGTTCACTGATGACGTGTTCAAAA 59.366 37.500 0.00 0.00 37.92 2.44
610 2743 4.188462 AGTTCACTGATGACGTGTTCAAA 58.812 39.130 0.00 0.00 37.92 2.69
611 2744 3.792401 AGTTCACTGATGACGTGTTCAA 58.208 40.909 0.00 0.00 37.92 2.69
612 2745 3.452755 AGTTCACTGATGACGTGTTCA 57.547 42.857 0.00 0.00 39.11 3.18
613 2746 4.263209 CGATAGTTCACTGATGACGTGTTC 59.737 45.833 0.00 0.00 33.38 3.18
614 2747 4.166523 CGATAGTTCACTGATGACGTGTT 58.833 43.478 0.00 0.00 33.38 3.32
628 2761 4.969293 TGACAGGGTCGTCACGATAGTTC 61.969 52.174 1.61 0.00 41.34 3.01
632 3105 1.536940 TTGACAGGGTCGTCACGATA 58.463 50.000 1.61 0.00 45.36 2.92
633 3106 0.677288 TTTGACAGGGTCGTCACGAT 59.323 50.000 1.61 0.00 45.36 3.73
636 3109 2.457366 ATCTTTGACAGGGTCGTCAC 57.543 50.000 0.00 0.00 45.36 3.67
646 3119 5.393787 CGTAACCTACCTGCTATCTTTGACA 60.394 44.000 0.00 0.00 0.00 3.58
650 3123 4.202131 GCTCGTAACCTACCTGCTATCTTT 60.202 45.833 0.00 0.00 0.00 2.52
655 3128 2.133281 TGCTCGTAACCTACCTGCTA 57.867 50.000 0.00 0.00 0.00 3.49
657 3130 1.067071 ACTTGCTCGTAACCTACCTGC 60.067 52.381 0.00 0.00 0.00 4.85
658 3131 4.445452 TTACTTGCTCGTAACCTACCTG 57.555 45.455 0.00 0.00 0.00 4.00
659 3132 5.007385 CATTACTTGCTCGTAACCTACCT 57.993 43.478 1.43 0.00 32.67 3.08
674 3147 3.119495 GGGCACAAAAGATCGCATTACTT 60.119 43.478 0.00 0.00 0.00 2.24
677 3150 1.400142 CGGGCACAAAAGATCGCATTA 59.600 47.619 0.00 0.00 0.00 1.90
678 3151 0.171007 CGGGCACAAAAGATCGCATT 59.829 50.000 0.00 0.00 0.00 3.56
679 3152 0.960364 ACGGGCACAAAAGATCGCAT 60.960 50.000 0.00 0.00 0.00 4.73
680 3153 0.320858 TACGGGCACAAAAGATCGCA 60.321 50.000 0.00 0.00 0.00 5.10
681 3154 0.096454 GTACGGGCACAAAAGATCGC 59.904 55.000 0.00 0.00 0.00 4.58
682 3155 1.434555 TGTACGGGCACAAAAGATCG 58.565 50.000 0.00 0.00 0.00 3.69
683 3156 2.030457 CGATGTACGGGCACAAAAGATC 59.970 50.000 0.00 0.00 38.46 2.75
684 3157 2.006888 CGATGTACGGGCACAAAAGAT 58.993 47.619 0.00 0.00 38.46 2.40
685 3158 1.434555 CGATGTACGGGCACAAAAGA 58.565 50.000 0.00 0.00 38.46 2.52
686 3159 3.967734 CGATGTACGGGCACAAAAG 57.032 52.632 0.00 0.00 38.46 2.27
704 3177 2.819422 TATGCTGTCTACGTCACGAC 57.181 50.000 2.91 0.00 0.00 4.34
708 3181 5.126545 ACCTTAACATATGCTGTCTACGTCA 59.873 40.000 1.58 0.00 36.98 4.35
713 3186 6.791867 ACTGACCTTAACATATGCTGTCTA 57.208 37.500 1.58 0.00 36.98 2.59
722 3204 7.814107 CGTGGTTACTTAACTGACCTTAACATA 59.186 37.037 0.00 0.00 36.47 2.29
724 3206 5.984926 CGTGGTTACTTAACTGACCTTAACA 59.015 40.000 0.00 0.00 36.47 2.41
732 3214 2.964464 TCCCACGTGGTTACTTAACTGA 59.036 45.455 31.80 15.41 36.47 3.41
735 3217 4.198028 AGATCCCACGTGGTTACTTAAC 57.802 45.455 31.80 14.00 34.77 2.01
736 3218 4.040706 ACAAGATCCCACGTGGTTACTTAA 59.959 41.667 31.80 9.39 34.77 1.85
742 3224 0.036306 GGACAAGATCCCACGTGGTT 59.964 55.000 31.80 19.62 42.46 3.67
744 3226 4.617875 GGACAAGATCCCACGTGG 57.382 61.111 28.26 28.26 42.46 4.94
760 3242 0.883833 CTTAACCTGTGCTGGCTTGG 59.116 55.000 0.00 0.00 0.00 3.61
761 3243 1.808945 CTCTTAACCTGTGCTGGCTTG 59.191 52.381 0.00 0.00 0.00 4.01
762 3244 1.884067 GCTCTTAACCTGTGCTGGCTT 60.884 52.381 0.00 0.00 0.00 4.35
763 3245 0.322008 GCTCTTAACCTGTGCTGGCT 60.322 55.000 0.00 0.00 0.00 4.75
766 3248 1.882912 TGTGCTCTTAACCTGTGCTG 58.117 50.000 0.00 0.00 0.00 4.41
768 3250 2.222027 ACTTGTGCTCTTAACCTGTGC 58.778 47.619 0.00 0.00 0.00 4.57
769 3251 3.627577 ACAACTTGTGCTCTTAACCTGTG 59.372 43.478 0.00 0.00 0.00 3.66
770 3252 3.886123 ACAACTTGTGCTCTTAACCTGT 58.114 40.909 0.00 0.00 0.00 4.00
772 3254 3.883489 GGAACAACTTGTGCTCTTAACCT 59.117 43.478 0.00 0.00 0.00 3.50
774 3256 4.893424 TGGAACAACTTGTGCTCTTAAC 57.107 40.909 0.00 0.00 31.92 2.01
789 3271 2.300152 CCACAGCTAGTCTCTTGGAACA 59.700 50.000 0.00 0.00 0.00 3.18
790 3272 2.300437 ACCACAGCTAGTCTCTTGGAAC 59.700 50.000 13.78 0.00 0.00 3.62
791 3273 2.563179 GACCACAGCTAGTCTCTTGGAA 59.437 50.000 13.78 0.00 0.00 3.53
793 3275 2.175202 AGACCACAGCTAGTCTCTTGG 58.825 52.381 7.28 1.44 39.08 3.61
794 3276 3.006323 ACAAGACCACAGCTAGTCTCTTG 59.994 47.826 19.15 19.15 42.48 3.02
795 3277 3.006323 CACAAGACCACAGCTAGTCTCTT 59.994 47.826 12.23 6.75 42.48 2.85
796 3278 2.560542 CACAAGACCACAGCTAGTCTCT 59.439 50.000 12.23 1.99 42.48 3.10
798 3280 1.001406 GCACAAGACCACAGCTAGTCT 59.999 52.381 7.28 7.28 45.18 3.24
799 3281 1.433534 GCACAAGACCACAGCTAGTC 58.566 55.000 3.17 3.17 0.00 2.59
800 3282 0.319900 CGCACAAGACCACAGCTAGT 60.320 55.000 0.00 0.00 0.00 2.57
803 3285 1.595382 GTCGCACAAGACCACAGCT 60.595 57.895 0.00 0.00 35.22 4.24
804 3286 2.939022 GTCGCACAAGACCACAGC 59.061 61.111 0.00 0.00 35.22 4.40
805 3287 1.299850 TCGTCGCACAAGACCACAG 60.300 57.895 0.00 0.00 37.85 3.66
806 3288 1.590525 GTCGTCGCACAAGACCACA 60.591 57.895 0.00 0.00 37.85 4.17
807 3289 1.590525 TGTCGTCGCACAAGACCAC 60.591 57.895 0.00 0.00 37.85 4.16
809 3291 2.645510 CGTGTCGTCGCACAAGACC 61.646 63.158 16.31 0.00 39.19 3.85
811 3293 1.656263 GTCGTGTCGTCGCACAAGA 60.656 57.895 16.31 12.39 39.19 3.02
814 3296 3.128632 AAGGTCGTGTCGTCGCACA 62.129 57.895 16.31 6.93 39.19 4.57
815 3297 2.354305 AAGGTCGTGTCGTCGCAC 60.354 61.111 9.00 9.00 36.12 5.34
817 3299 3.103911 CCAAGGTCGTGTCGTCGC 61.104 66.667 0.00 0.00 0.00 5.19
820 3302 3.836176 GACGCCAAGGTCGTGTCGT 62.836 63.158 12.04 0.74 40.59 4.34
821 3303 3.103911 GACGCCAAGGTCGTGTCG 61.104 66.667 12.04 0.00 40.59 4.35
822 3304 2.737376 GGACGCCAAGGTCGTGTC 60.737 66.667 12.04 4.45 40.59 3.67
823 3305 3.231736 AGGACGCCAAGGTCGTGT 61.232 61.111 12.04 0.00 40.59 4.49
824 3306 2.738521 CAGGACGCCAAGGTCGTG 60.739 66.667 12.04 3.87 43.62 4.35
825 3307 4.681978 GCAGGACGCCAAGGTCGT 62.682 66.667 8.00 8.00 43.49 4.34
843 3325 4.157120 ATGGGTACGGCTCCACGC 62.157 66.667 0.00 0.00 35.67 5.34
844 3326 2.202878 CATGGGTACGGCTCCACG 60.203 66.667 0.00 0.00 35.67 4.94
845 3327 2.513897 GCATGGGTACGGCTCCAC 60.514 66.667 0.00 0.00 35.67 4.02
846 3328 4.155733 CGCATGGGTACGGCTCCA 62.156 66.667 0.68 0.00 37.46 3.86
852 3334 4.562425 ATGGGGCGCATGGGTACG 62.562 66.667 16.95 0.00 0.00 3.67
853 3335 2.594592 GATGGGGCGCATGGGTAC 60.595 66.667 22.65 2.99 0.00 3.34
854 3336 4.248842 CGATGGGGCGCATGGGTA 62.249 66.667 22.65 0.00 0.00 3.69
862 3344 2.592574 ATGTGATGCGATGGGGCG 60.593 61.111 0.00 0.00 35.06 6.13
863 3345 2.558286 CCATGTGATGCGATGGGGC 61.558 63.158 0.00 0.00 36.26 5.80
864 3346 1.152902 ACCATGTGATGCGATGGGG 60.153 57.895 0.00 0.00 43.13 4.96
865 3347 1.449726 CCACCATGTGATGCGATGGG 61.450 60.000 0.00 0.00 43.13 4.00
866 3348 2.027325 CCACCATGTGATGCGATGG 58.973 57.895 0.00 0.00 44.23 3.51
867 3349 1.357690 GCCACCATGTGATGCGATG 59.642 57.895 0.00 0.00 35.23 3.84
868 3350 1.077572 TGCCACCATGTGATGCGAT 60.078 52.632 0.00 0.00 35.23 4.58
869 3351 1.746239 CTGCCACCATGTGATGCGA 60.746 57.895 0.00 0.00 35.23 5.10
870 3352 2.042259 ACTGCCACCATGTGATGCG 61.042 57.895 0.00 0.00 35.23 4.73
871 3353 1.509463 CACTGCCACCATGTGATGC 59.491 57.895 0.00 0.00 35.23 3.91
872 3354 1.509463 GCACTGCCACCATGTGATG 59.491 57.895 0.00 0.00 35.23 3.07
873 3355 4.007457 GCACTGCCACCATGTGAT 57.993 55.556 0.00 0.00 35.23 3.06
888 3370 2.203195 GTGAGTGTGGCAGTGGCA 60.203 61.111 16.56 16.56 43.71 4.92
889 3371 1.580845 GATGTGAGTGTGGCAGTGGC 61.581 60.000 10.30 10.30 40.13 5.01
890 3372 0.035881 AGATGTGAGTGTGGCAGTGG 59.964 55.000 0.00 0.00 0.00 4.00
891 3373 1.534163 CAAGATGTGAGTGTGGCAGTG 59.466 52.381 0.00 0.00 0.00 3.66
892 3374 1.417517 TCAAGATGTGAGTGTGGCAGT 59.582 47.619 0.00 0.00 0.00 4.40
893 3375 1.802960 GTCAAGATGTGAGTGTGGCAG 59.197 52.381 0.00 0.00 36.74 4.85
894 3376 1.873486 CGTCAAGATGTGAGTGTGGCA 60.873 52.381 0.00 0.00 36.74 4.92
902 3384 2.159240 CCGATTCCTCGTCAAGATGTGA 60.159 50.000 0.00 0.00 43.49 3.58
937 3419 9.915629 GGAGTTTGATCTAATAATGACTCGTAT 57.084 33.333 0.00 0.00 34.58 3.06
938 3420 8.074370 CGGAGTTTGATCTAATAATGACTCGTA 58.926 37.037 0.00 0.00 34.58 3.43
939 3421 6.918569 CGGAGTTTGATCTAATAATGACTCGT 59.081 38.462 0.00 0.00 34.58 4.18
945 3435 4.455877 GGGCCGGAGTTTGATCTAATAATG 59.544 45.833 5.05 0.00 0.00 1.90
1010 3501 0.036577 GAAGAGAGCAGAGCAAGGCA 60.037 55.000 0.00 0.00 0.00 4.75
1011 3502 0.744057 GGAAGAGAGCAGAGCAAGGC 60.744 60.000 0.00 0.00 0.00 4.35
1012 3503 0.903942 AGGAAGAGAGCAGAGCAAGG 59.096 55.000 0.00 0.00 0.00 3.61
1014 3505 0.529833 CGAGGAAGAGAGCAGAGCAA 59.470 55.000 0.00 0.00 0.00 3.91
1015 3506 1.943116 GCGAGGAAGAGAGCAGAGCA 61.943 60.000 0.00 0.00 0.00 4.26
1016 3507 1.226945 GCGAGGAAGAGAGCAGAGC 60.227 63.158 0.00 0.00 0.00 4.09
1020 3511 1.593787 CAAGGCGAGGAAGAGAGCA 59.406 57.895 0.00 0.00 0.00 4.26
1039 3530 2.103042 GCACTAGCACGGCAAGGAG 61.103 63.158 0.00 0.00 41.58 3.69
1054 3545 4.892965 TGGCTGGTGGTGGTGCAC 62.893 66.667 8.80 8.80 0.00 4.57
1055 3546 4.892965 GTGGCTGGTGGTGGTGCA 62.893 66.667 0.00 0.00 0.00 4.57
1063 3554 3.357079 GAGCAACCGTGGCTGGTG 61.357 66.667 4.73 0.00 42.89 4.17
1064 3555 4.988598 CGAGCAACCGTGGCTGGT 62.989 66.667 4.73 0.00 46.67 4.00
1065 3556 3.583276 TACGAGCAACCGTGGCTGG 62.583 63.158 4.73 6.77 42.78 4.85
1066 3557 2.048597 TACGAGCAACCGTGGCTG 60.049 61.111 4.73 0.56 42.78 4.85
1067 3558 2.261671 CTACGAGCAACCGTGGCT 59.738 61.111 0.00 0.00 46.07 4.75
1069 3560 2.813908 GGCTACGAGCAACCGTGG 60.814 66.667 8.69 7.09 44.75 4.94
1070 3561 3.179265 CGGCTACGAGCAACCGTG 61.179 66.667 8.69 1.80 44.75 4.94
1073 3564 3.188786 CTGCGGCTACGAGCAACC 61.189 66.667 0.00 0.00 44.75 3.77
1074 3565 3.854459 GCTGCGGCTACGAGCAAC 61.854 66.667 11.21 1.72 44.75 4.17
1131 3622 2.584608 GTGATGTAGCTGGGCGGT 59.415 61.111 0.00 0.00 0.00 5.68
1207 3698 0.742281 CATGTGGCGAGGAGGAACTG 60.742 60.000 0.00 0.00 41.55 3.16
1261 3755 3.007920 CTGGGAGGAGCTGCTGGT 61.008 66.667 14.48 0.00 0.00 4.00
1304 3798 0.747283 CGAGTAGGTACCCGACTGCT 60.747 60.000 19.30 5.56 39.49 4.24
1312 3806 3.114650 GGCCGACGAGTAGGTACC 58.885 66.667 2.73 2.73 0.00 3.34
1352 3846 2.879462 CGACCGTAACGCTGAGGC 60.879 66.667 0.00 0.00 0.00 4.70
1438 3938 1.153745 CGGACCCGCTCTTGAAGAG 60.154 63.158 17.59 17.59 45.04 2.85
1439 3939 1.906824 ACGGACCCGCTCTTGAAGA 60.907 57.895 8.55 0.00 44.19 2.87
1441 3941 2.342279 CACGGACCCGCTCTTGAA 59.658 61.111 8.55 0.00 44.19 2.69
1589 4092 3.642741 ATGAGCTTCCCCCGGGACT 62.643 63.158 26.32 11.07 45.11 3.85
1595 4098 0.182299 CCTTGAGATGAGCTTCCCCC 59.818 60.000 0.00 0.00 0.00 5.40
1783 4286 3.691744 GAGTGGAGCTGAGGACGCG 62.692 68.421 3.53 3.53 0.00 6.01
1787 4290 1.636003 TGTAGAGAGTGGAGCTGAGGA 59.364 52.381 0.00 0.00 0.00 3.71
1852 4355 2.427506 GAACCTGTAGAACTTGCCTGG 58.572 52.381 0.00 0.00 0.00 4.45
1854 4357 1.608283 GCGAACCTGTAGAACTTGCCT 60.608 52.381 0.00 0.00 0.00 4.75
1893 4399 2.183300 GCATAGGCACGGACGACA 59.817 61.111 0.00 0.00 40.72 4.35
1911 4417 2.202946 TGCACGTTCTTGGCACGA 60.203 55.556 2.05 0.00 40.20 4.35
1914 4420 1.891919 GTCCTGCACGTTCTTGGCA 60.892 57.895 0.00 0.00 35.96 4.92
1983 4492 2.264794 GACGTCCTCCCGTTGCAT 59.735 61.111 3.51 0.00 41.98 3.96
1990 4499 3.450115 CAGTCCGGACGTCCTCCC 61.450 72.222 30.92 17.83 35.21 4.30
1991 4500 4.131088 GCAGTCCGGACGTCCTCC 62.131 72.222 30.92 18.18 36.20 4.30
2159 4671 2.506438 GCGTGTACTCCTCGGTGC 60.506 66.667 0.00 0.00 0.00 5.01
2247 4759 2.425592 CAGTGGTTCCGGCACTGA 59.574 61.111 27.26 3.91 46.55 3.41
2257 4769 0.532862 CAGTCGTTGAGGCAGTGGTT 60.533 55.000 0.00 0.00 0.00 3.67
2260 4772 0.038251 TAGCAGTCGTTGAGGCAGTG 60.038 55.000 0.00 0.00 0.00 3.66
2302 4814 3.118454 CGCGCAATCAGTCCCGTT 61.118 61.111 8.75 0.00 0.00 4.44
2310 4822 3.430862 GCCAACTCCGCGCAATCA 61.431 61.111 8.75 0.00 0.00 2.57
2319 4831 3.050275 GTCAGCACCGCCAACTCC 61.050 66.667 0.00 0.00 0.00 3.85
2330 4842 4.830765 GCCGCCCGTATGTCAGCA 62.831 66.667 0.00 0.00 0.00 4.41
2352 4864 2.050714 TTCGTGGTGACGTCGCTC 60.051 61.111 26.79 17.62 46.20 5.03
2485 5009 2.564721 GGTGGTGCTTTGCCAGGAC 61.565 63.158 0.00 0.00 43.15 3.85
2495 5019 0.109342 CTTCTTGGTCAGGTGGTGCT 59.891 55.000 0.00 0.00 0.00 4.40
2525 5052 2.113139 CGCTCAACAACCCCTGGT 59.887 61.111 0.00 0.00 37.65 4.00
2601 5134 3.077907 CCGAAGCTCCCTTTCCCA 58.922 61.111 0.00 0.00 0.00 4.37
2739 5284 1.431488 CGATCATGCGGACCAGGTTG 61.431 60.000 0.00 0.00 0.00 3.77
2940 5495 0.107643 TGTTGTCCGGCTTGATGTCA 59.892 50.000 0.00 0.00 0.00 3.58
3045 5601 1.228862 GGTGCCCCTGATGTTGGTT 60.229 57.895 0.00 0.00 0.00 3.67
3489 6076 7.067372 TGGATCATTCTATGTCAATGTTGTTCC 59.933 37.037 0.00 0.00 33.61 3.62
3502 6135 4.763793 GGATGGTTGGTGGATCATTCTATG 59.236 45.833 0.00 0.00 0.00 2.23
3537 6170 6.441093 TGCTCATATCCATGTTGTTCTTTC 57.559 37.500 0.00 0.00 33.57 2.62
3542 6175 3.378112 CGGTTGCTCATATCCATGTTGTT 59.622 43.478 0.00 0.00 33.57 2.83
3543 6176 2.945008 CGGTTGCTCATATCCATGTTGT 59.055 45.455 0.00 0.00 33.57 3.32
3547 6180 2.738846 GCTACGGTTGCTCATATCCATG 59.261 50.000 7.32 0.00 0.00 3.66
3548 6181 2.289694 GGCTACGGTTGCTCATATCCAT 60.290 50.000 13.87 0.00 0.00 3.41
3585 6261 8.587952 AACCAAAAGAGTAAATTGCACAATAC 57.412 30.769 0.00 0.00 0.00 1.89
3597 6273 9.112725 GGAACTACTGTAAAACCAAAAGAGTAA 57.887 33.333 0.00 0.00 0.00 2.24
3611 6287 4.941263 GCCAACATGATGGAACTACTGTAA 59.059 41.667 25.03 0.00 43.54 2.41
3632 6308 8.531982 TCTGGTATCATGTATAGAAATAGTGCC 58.468 37.037 0.00 0.00 0.00 5.01
3727 6403 5.010617 GCTTTAGGTTGAAGACATTTTGGGA 59.989 40.000 0.00 0.00 0.00 4.37
3728 6404 5.221422 TGCTTTAGGTTGAAGACATTTTGGG 60.221 40.000 0.00 0.00 0.00 4.12
3733 6409 9.696917 CTTTAAATGCTTTAGGTTGAAGACATT 57.303 29.630 0.00 0.00 34.95 2.71
3812 6492 1.013431 CACACATATGCGCACGTCG 60.013 57.895 14.90 3.99 42.12 5.12
3853 6533 5.106673 GCTACTTTGTTGGGACAGTTACATC 60.107 44.000 0.00 0.00 42.39 3.06
3859 6539 1.493022 TGGCTACTTTGTTGGGACAGT 59.507 47.619 0.00 0.00 42.39 3.55
3893 6814 2.681848 CCTCAAGTTCATCCTGCATGAC 59.318 50.000 0.00 0.00 41.56 3.06
3936 6915 0.450184 ATCAAACGAATTTCGGCCCG 59.550 50.000 21.71 0.00 45.59 6.13
3942 6921 6.942891 TCAAAAGCCAAATCAAACGAATTTC 58.057 32.000 0.00 0.00 0.00 2.17
3966 6945 2.359848 TGGAACTGCACGCTACGTATAT 59.640 45.455 0.00 0.00 38.32 0.86
3967 6946 1.744522 TGGAACTGCACGCTACGTATA 59.255 47.619 0.00 0.00 38.32 1.47
3969 6948 0.387622 GTGGAACTGCACGCTACGTA 60.388 55.000 0.00 0.00 38.32 3.57
3971 6950 2.716828 CGTGGAACTGCACGCTACG 61.717 63.158 10.81 1.37 37.99 3.51
3972 6951 3.156334 CGTGGAACTGCACGCTAC 58.844 61.111 10.81 0.00 37.99 3.58
3976 6955 4.059459 GTCGCGTGGAACTGCACG 62.059 66.667 18.02 18.02 46.30 5.34
3977 6956 3.712881 GGTCGCGTGGAACTGCAC 61.713 66.667 5.77 0.00 36.43 4.57
3978 6957 3.741830 TTGGTCGCGTGGAACTGCA 62.742 57.895 5.77 0.00 36.43 4.41
3983 6962 3.556625 CGAATTGGTCGCGTGGAA 58.443 55.556 5.77 0.00 44.14 3.53
3993 6972 2.324477 GCGCACGGATCGAATTGG 59.676 61.111 0.30 0.00 0.00 3.16
3994 6973 1.705337 AAGGCGCACGGATCGAATTG 61.705 55.000 10.83 0.00 0.00 2.32
3995 6974 1.024579 AAAGGCGCACGGATCGAATT 61.025 50.000 10.83 0.00 0.00 2.17
3996 6975 1.449601 AAAGGCGCACGGATCGAAT 60.450 52.632 10.83 0.00 0.00 3.34
3997 6976 2.047655 AAAGGCGCACGGATCGAA 60.048 55.556 10.83 0.00 0.00 3.71
3998 6977 2.813474 CAAAGGCGCACGGATCGA 60.813 61.111 10.83 0.00 0.00 3.59
3999 6978 4.520846 GCAAAGGCGCACGGATCG 62.521 66.667 10.83 0.00 0.00 3.69
4010 6989 1.693083 GCTACGCGTACCAGCAAAGG 61.693 60.000 23.77 9.39 36.85 3.11
4011 6990 1.011968 TGCTACGCGTACCAGCAAAG 61.012 55.000 27.78 13.97 42.09 2.77
4013 6992 1.735198 GTGCTACGCGTACCAGCAA 60.735 57.895 30.52 15.89 46.18 3.91
4014 6993 2.126228 GTGCTACGCGTACCAGCA 60.126 61.111 26.61 26.61 42.77 4.41
4015 6994 2.884207 GGTGCTACGCGTACCAGC 60.884 66.667 23.25 23.25 46.52 4.85
4019 6998 0.109412 AGTCAAGGTGCTACGCGTAC 60.109 55.000 16.41 8.67 0.00 3.67
4020 6999 0.109458 CAGTCAAGGTGCTACGCGTA 60.109 55.000 19.40 19.40 0.00 4.42
4021 7000 1.372997 CAGTCAAGGTGCTACGCGT 60.373 57.895 19.17 19.17 0.00 6.01
4022 7001 2.094659 CCAGTCAAGGTGCTACGCG 61.095 63.158 3.53 3.53 0.00 6.01
4023 7002 1.004918 ACCAGTCAAGGTGCTACGC 60.005 57.895 0.00 0.00 41.30 4.42
4025 7004 0.317479 ACGACCAGTCAAGGTGCTAC 59.683 55.000 0.00 0.00 43.38 3.58
4029 7008 1.202533 ACTGAACGACCAGTCAAGGTG 60.203 52.381 8.26 0.00 43.34 4.00
4030 7009 1.120530 ACTGAACGACCAGTCAAGGT 58.879 50.000 8.26 0.00 43.34 3.50
4032 7011 0.861837 GCACTGAACGACCAGTCAAG 59.138 55.000 10.55 3.49 44.87 3.02
4056 7359 2.996734 CCCGGCAAAGGCAATGGT 60.997 61.111 0.00 0.00 43.71 3.55
4135 7462 4.459089 GAGGCAGGGCTCGGTGTC 62.459 72.222 7.12 0.00 0.00 3.67
4137 7464 4.154347 GAGAGGCAGGGCTCGGTG 62.154 72.222 15.96 0.00 0.00 4.94
4160 7500 0.185901 ACCAGCTCCAACCAATGTGT 59.814 50.000 0.00 0.00 0.00 3.72
4196 7544 0.604243 CCATCGTCAACCCGGAAACA 60.604 55.000 0.73 0.00 0.00 2.83
4255 7629 2.666098 GCGGCAGGGGGAAGACTTA 61.666 63.158 0.00 0.00 0.00 2.24
4278 7652 2.509336 GTGTCCATCTCACCGCCG 60.509 66.667 0.00 0.00 0.00 6.46
4346 7751 1.022735 CATACGGACCTACTGTCGCT 58.977 55.000 0.00 0.00 45.46 4.93
4358 7763 0.974010 GGGTCAGTGTCCCATACGGA 60.974 60.000 19.36 0.00 44.05 4.69
4359 7764 0.976073 AGGGTCAGTGTCCCATACGG 60.976 60.000 24.93 0.00 46.82 4.02
4360 7765 0.175760 CAGGGTCAGTGTCCCATACG 59.824 60.000 24.93 8.59 46.82 3.06
4361 7766 1.482593 CTCAGGGTCAGTGTCCCATAC 59.517 57.143 24.93 0.66 46.82 2.39
4362 7767 1.078823 ACTCAGGGTCAGTGTCCCATA 59.921 52.381 24.93 12.60 46.82 2.74
4363 7768 0.178891 ACTCAGGGTCAGTGTCCCAT 60.179 55.000 24.93 9.39 46.82 4.00
4364 7769 0.832135 GACTCAGGGTCAGTGTCCCA 60.832 60.000 24.93 6.75 46.82 4.37
4365 7770 0.543174 AGACTCAGGGTCAGTGTCCC 60.543 60.000 16.93 16.93 46.72 4.46
4366 7771 1.273886 GAAGACTCAGGGTCAGTGTCC 59.726 57.143 2.43 0.00 46.72 4.02
4367 7772 2.230266 GAGAAGACTCAGGGTCAGTGTC 59.770 54.545 2.43 0.00 46.72 3.67
4368 7773 2.243810 GAGAAGACTCAGGGTCAGTGT 58.756 52.381 2.43 0.00 46.72 3.55
4371 7776 1.824230 CAGGAGAAGACTCAGGGTCAG 59.176 57.143 2.43 0.00 46.72 3.51
4372 7777 1.930251 CAGGAGAAGACTCAGGGTCA 58.070 55.000 2.43 0.00 46.72 4.02
4386 7791 3.249559 GTCTTCACAGTTGAAAGCAGGAG 59.750 47.826 0.00 0.00 41.34 3.69
4390 7795 1.330521 GCGTCTTCACAGTTGAAAGCA 59.669 47.619 0.00 0.00 41.34 3.91
4392 7797 1.657538 GCGCGTCTTCACAGTTGAAAG 60.658 52.381 8.43 0.00 41.34 2.62
4430 7902 1.722163 GCGTCGTGTTCGTCGTGTA 60.722 57.895 8.59 0.00 46.29 2.90
4439 7911 0.110056 AGTCGATAACGCGTCGTGTT 60.110 50.000 25.66 25.66 39.99 3.32
4440 7912 0.791983 CAGTCGATAACGCGTCGTGT 60.792 55.000 14.44 5.42 39.99 4.49
4441 7913 0.791983 ACAGTCGATAACGCGTCGTG 60.792 55.000 14.44 9.94 39.99 4.35
4442 7914 0.791983 CACAGTCGATAACGCGTCGT 60.792 55.000 14.44 3.56 43.97 4.34
4443 7915 1.461317 CCACAGTCGATAACGCGTCG 61.461 60.000 14.44 13.02 40.30 5.12
4449 7921 5.607119 AACACATTTCCACAGTCGATAAC 57.393 39.130 0.00 0.00 0.00 1.89
4451 7923 6.261158 TCAAAAACACATTTCCACAGTCGATA 59.739 34.615 0.00 0.00 0.00 2.92
4452 7924 5.067153 TCAAAAACACATTTCCACAGTCGAT 59.933 36.000 0.00 0.00 0.00 3.59
4454 7926 4.667262 TCAAAAACACATTTCCACAGTCG 58.333 39.130 0.00 0.00 0.00 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.