Multiple sequence alignment - TraesCS7B01G299900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G299900 chr7B 100.000 3471 0 0 1 3471 537353887 537357357 0.000000e+00 6410.0
1 TraesCS7B01G299900 chr7B 79.301 773 101 28 1587 2329 537259231 537259974 1.450000e-133 486.0
2 TraesCS7B01G299900 chr7B 86.111 252 29 6 681 929 537354114 537354362 2.050000e-67 267.0
3 TraesCS7B01G299900 chr7B 86.111 252 29 6 228 476 537354567 537354815 2.050000e-67 267.0
4 TraesCS7B01G299900 chr7B 89.947 189 17 2 1002 1190 325847309 325847495 3.460000e-60 243.0
5 TraesCS7B01G299900 chr7B 86.000 100 11 1 526 625 208139341 208139245 1.700000e-18 104.0
6 TraesCS7B01G299900 chr7A 89.054 1955 131 35 1268 3166 579724765 579726692 0.000000e+00 2348.0
7 TraesCS7B01G299900 chr7A 86.463 1145 94 33 110 1221 579723651 579724767 0.000000e+00 1199.0
8 TraesCS7B01G299900 chr7A 81.152 764 97 24 1587 2319 579649474 579650221 1.400000e-158 569.0
9 TraesCS7B01G299900 chr7A 83.261 460 64 7 2321 2768 579650263 579650721 8.970000e-111 411.0
10 TraesCS7B01G299900 chr7A 84.252 254 34 5 681 928 579723773 579724026 3.460000e-60 243.0
11 TraesCS7B01G299900 chr7D 90.041 1215 95 14 1475 2678 509067774 509068973 0.000000e+00 1550.0
12 TraesCS7B01G299900 chr7D 84.642 1159 98 47 33 1137 509066314 509067446 0.000000e+00 1081.0
13 TraesCS7B01G299900 chr7D 79.884 691 94 22 1588 2248 508894919 508895594 6.790000e-127 464.0
14 TraesCS7B01G299900 chr7D 85.606 396 35 3 2771 3166 509069008 509069381 2.510000e-106 396.0
15 TraesCS7B01G299900 chr7D 86.345 249 33 1 228 476 509067006 509067253 1.590000e-68 270.0
16 TraesCS7B01G299900 chr7D 85.433 254 30 6 681 928 509066528 509066780 1.240000e-64 257.0
17 TraesCS7B01G299900 chr2B 86.037 487 51 11 1366 1847 91548952 91548478 1.110000e-139 507.0
18 TraesCS7B01G299900 chr2B 85.537 484 53 10 1366 1847 354681329 354681797 1.120000e-134 490.0
19 TraesCS7B01G299900 chr2B 88.000 200 14 7 1036 1235 91549166 91548977 9.690000e-56 228.0
20 TraesCS7B01G299900 chr5A 93.561 264 12 1 3213 3471 211622748 211622485 4.200000e-104 388.0
21 TraesCS7B01G299900 chr2A 93.561 264 12 1 3213 3471 170060140 170060403 4.200000e-104 388.0
22 TraesCS7B01G299900 chr1D 93.561 264 12 1 3213 3471 413724563 413724300 4.200000e-104 388.0
23 TraesCS7B01G299900 chr1D 92.803 264 14 1 3213 3471 288471232 288470969 9.090000e-101 377.0
24 TraesCS7B01G299900 chr1D 77.158 556 86 27 1546 2089 193512816 193513342 5.670000e-73 285.0
25 TraesCS7B01G299900 chr1D 85.577 104 12 1 526 629 295184595 295184695 4.740000e-19 106.0
26 TraesCS7B01G299900 chr6B 93.182 264 13 1 3213 3471 422972369 422972106 1.950000e-102 383.0
27 TraesCS7B01G299900 chr6D 92.803 264 13 2 3213 3471 113506551 113506813 9.090000e-101 377.0
28 TraesCS7B01G299900 chr6D 92.776 263 15 1 3213 3471 128897226 128896964 9.090000e-101 377.0
29 TraesCS7B01G299900 chr5D 92.803 264 13 2 3213 3471 180471040 180470778 9.090000e-101 377.0
30 TraesCS7B01G299900 chr4D 92.803 264 14 1 3213 3471 297225718 297225981 9.090000e-101 377.0
31 TraesCS7B01G299900 chr4D 85.859 99 11 1 526 624 503153940 503153845 6.130000e-18 102.0
32 TraesCS7B01G299900 chr1A 77.281 559 81 31 1546 2089 240318461 240318988 1.580000e-73 287.0
33 TraesCS7B01G299900 chr1B 86.161 224 19 6 1013 1235 227792597 227792809 7.490000e-57 231.0
34 TraesCS7B01G299900 chr1B 85.714 224 22 5 1012 1235 226904004 226904217 9.690000e-56 228.0
35 TraesCS7B01G299900 chr1B 85.577 104 12 1 526 629 396594756 396594856 4.740000e-19 106.0
36 TraesCS7B01G299900 chr5B 91.304 115 9 1 1076 1190 280175506 280175619 4.640000e-34 156.0
37 TraesCS7B01G299900 chr4A 87.234 94 9 1 526 619 577472473 577472563 1.700000e-18 104.0
38 TraesCS7B01G299900 chr3B 86.458 96 8 3 526 621 689306976 689307066 2.200000e-17 100.0
39 TraesCS7B01G299900 chr3B 83.333 108 13 4 518 624 330798092 330797989 1.030000e-15 95.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G299900 chr7B 537353887 537357357 3470 False 2314.666667 6410 90.740667 1 3471 3 chr7B.!!$F3 3470
1 TraesCS7B01G299900 chr7B 537259231 537259974 743 False 486.000000 486 79.301000 1587 2329 1 chr7B.!!$F2 742
2 TraesCS7B01G299900 chr7A 579723651 579726692 3041 False 1263.333333 2348 86.589667 110 3166 3 chr7A.!!$F2 3056
3 TraesCS7B01G299900 chr7A 579649474 579650721 1247 False 490.000000 569 82.206500 1587 2768 2 chr7A.!!$F1 1181
4 TraesCS7B01G299900 chr7D 509066314 509069381 3067 False 710.800000 1550 86.413400 33 3166 5 chr7D.!!$F2 3133
5 TraesCS7B01G299900 chr7D 508894919 508895594 675 False 464.000000 464 79.884000 1588 2248 1 chr7D.!!$F1 660
6 TraesCS7B01G299900 chr2B 91548478 91549166 688 True 367.500000 507 87.018500 1036 1847 2 chr2B.!!$R1 811
7 TraesCS7B01G299900 chr1D 193512816 193513342 526 False 285.000000 285 77.158000 1546 2089 1 chr1D.!!$F1 543
8 TraesCS7B01G299900 chr1A 240318461 240318988 527 False 287.000000 287 77.281000 1546 2089 1 chr1A.!!$F1 543

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
944 1001 0.247736 CCTGCGTCCTGAGCTACTTT 59.752 55.0 0.00 0.00 35.28 2.66 F
1252 1309 0.302288 TCCTTTCGTTGAACGTTGCG 59.698 50.0 17.86 7.87 43.14 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1928 2282 1.067213 TCGACGGTGAGAATTCATGCA 60.067 47.619 8.44 0.0 35.39 3.96 R
3172 3608 0.036732 ACGAAGGCACCACATCATGT 59.963 50.000 0.00 0.0 0.00 3.21 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
44 45 4.647424 TTGCCTTGGTAAACAAAGACTG 57.353 40.909 0.00 0.00 38.91 3.51
63 64 2.430367 GTGGGTCCTTTGGTCGCT 59.570 61.111 0.00 0.00 0.00 4.93
64 65 1.671379 GTGGGTCCTTTGGTCGCTC 60.671 63.158 0.00 0.00 0.00 5.03
66 67 2.654877 GGTCCTTTGGTCGCTCGA 59.345 61.111 0.00 0.00 0.00 4.04
76 77 2.172659 TCGCTCGAGAACGACACG 59.827 61.111 18.75 8.38 43.81 4.49
80 81 3.930376 CTCGAGAACGACACGCGCT 62.930 63.158 6.58 0.00 46.04 5.92
85 86 0.448990 AGAACGACACGCGCTATGTA 59.551 50.000 5.73 0.00 46.04 2.29
86 87 0.564767 GAACGACACGCGCTATGTAC 59.435 55.000 5.73 7.36 46.04 2.90
94 95 2.496291 GCGCTATGTACGGGTCCCT 61.496 63.158 6.29 0.00 0.00 4.20
108 127 2.125512 CCCTCTTTGACTCCGGCG 60.126 66.667 0.00 0.00 0.00 6.46
119 138 2.035155 TCCGGCGGAGAACAGAGA 59.965 61.111 27.46 0.00 0.00 3.10
120 139 2.046864 TCCGGCGGAGAACAGAGAG 61.047 63.158 27.46 0.00 0.00 3.20
129 148 2.235898 GGAGAACAGAGAGCCATCACTT 59.764 50.000 0.00 0.00 0.00 3.16
130 149 3.520569 GAGAACAGAGAGCCATCACTTC 58.479 50.000 0.00 0.00 0.00 3.01
131 150 2.235898 AGAACAGAGAGCCATCACTTCC 59.764 50.000 0.00 0.00 0.00 3.46
134 154 1.134461 CAGAGAGCCATCACTTCCAGG 60.134 57.143 0.00 0.00 0.00 4.45
159 179 3.816523 GCTACCTAGCTACTCCACTACTG 59.183 52.174 0.00 0.00 45.62 2.74
163 183 2.493414 AGCTACTCCACTACTGTCGT 57.507 50.000 0.00 0.00 0.00 4.34
164 184 2.358015 AGCTACTCCACTACTGTCGTC 58.642 52.381 0.00 0.00 0.00 4.20
165 185 2.027007 AGCTACTCCACTACTGTCGTCT 60.027 50.000 0.00 0.00 0.00 4.18
169 189 2.557490 ACTCCACTACTGTCGTCTTTCC 59.443 50.000 0.00 0.00 0.00 3.13
172 192 2.820787 CCACTACTGTCGTCTTTCCTCT 59.179 50.000 0.00 0.00 0.00 3.69
178 201 2.823154 CTGTCGTCTTTCCTCTTCCTCT 59.177 50.000 0.00 0.00 0.00 3.69
179 202 3.231818 TGTCGTCTTTCCTCTTCCTCTT 58.768 45.455 0.00 0.00 0.00 2.85
181 204 2.826725 TCGTCTTTCCTCTTCCTCTTCC 59.173 50.000 0.00 0.00 0.00 3.46
185 208 0.617820 TTCCTCTTCCTCTTCCCCGG 60.618 60.000 0.00 0.00 0.00 5.73
293 317 4.883354 GCCGCCCCTCTCCATTGG 62.883 72.222 0.00 0.00 0.00 3.16
303 327 1.697432 CTCTCCATTGGCCGGGTAATA 59.303 52.381 2.18 0.00 0.00 0.98
315 339 3.433173 GCCGGGTAATACTGTCCTCATTT 60.433 47.826 2.18 0.00 0.00 2.32
340 364 2.320781 GAGAACTCCATAGGCTGGCTA 58.679 52.381 13.67 13.67 45.52 3.93
347 371 2.179204 TCCATAGGCTGGCTAGGACTTA 59.821 50.000 22.26 4.26 45.52 2.24
365 389 2.539277 TAGGAATGCACGGGAGGGGA 62.539 60.000 0.00 0.00 38.67 4.81
380 404 3.821306 GGGACCTGACTTTGGTTGT 57.179 52.632 0.00 0.00 38.03 3.32
382 406 1.318576 GGACCTGACTTTGGTTGTGG 58.681 55.000 0.00 0.00 38.03 4.17
383 407 1.409661 GGACCTGACTTTGGTTGTGGT 60.410 52.381 0.00 0.00 38.03 4.16
384 408 1.947456 GACCTGACTTTGGTTGTGGTC 59.053 52.381 0.00 0.00 38.03 4.02
385 409 1.283613 ACCTGACTTTGGTTGTGGTCA 59.716 47.619 0.00 0.00 37.21 4.02
466 495 2.124983 GCATCAGGCCGCTCTTGA 60.125 61.111 0.00 0.00 36.11 3.02
468 497 1.505477 GCATCAGGCCGCTCTTGATC 61.505 60.000 0.00 0.00 36.11 2.92
475 504 0.809241 GCCGCTCTTGATCAGTCCTG 60.809 60.000 0.00 0.00 0.00 3.86
482 519 2.082231 CTTGATCAGTCCTGTGCTTGG 58.918 52.381 0.00 0.00 0.00 3.61
512 549 4.262678 GGCAGAGAACAGAGAACCTTTACT 60.263 45.833 0.00 0.00 0.00 2.24
513 550 5.301555 GCAGAGAACAGAGAACCTTTACTT 58.698 41.667 0.00 0.00 0.00 2.24
514 551 5.407084 GCAGAGAACAGAGAACCTTTACTTC 59.593 44.000 0.00 0.00 0.00 3.01
515 552 6.516718 CAGAGAACAGAGAACCTTTACTTCA 58.483 40.000 0.00 0.00 0.00 3.02
520 558 5.625150 ACAGAGAACCTTTACTTCATTGCT 58.375 37.500 0.00 0.00 0.00 3.91
521 559 6.064717 ACAGAGAACCTTTACTTCATTGCTT 58.935 36.000 0.00 0.00 0.00 3.91
594 633 7.133891 AGTATAAAGTTGCAGTGCTAAAGTG 57.866 36.000 17.60 0.00 0.00 3.16
597 636 2.222027 AGTTGCAGTGCTAAAGTGGAC 58.778 47.619 17.60 2.59 0.00 4.02
614 653 2.094906 TGGACACACTTATCTTCGGACG 60.095 50.000 0.00 0.00 0.00 4.79
629 668 0.464452 GGACGGAGGGAATACCACTG 59.536 60.000 0.00 0.00 43.89 3.66
685 738 1.272769 GCTACTCCGTCCAGTGTTCTT 59.727 52.381 0.00 0.00 0.00 2.52
772 826 6.893020 AGGTAATCCTGTCCTCATTAGTTT 57.107 37.500 0.00 0.00 43.33 2.66
799 853 1.449353 CATAGGCTGGCTGGGACTC 59.551 63.158 14.70 0.00 0.00 3.36
818 872 3.849951 GGAATGCGCGGGAGAGGA 61.850 66.667 8.83 0.00 0.00 3.71
833 887 2.550180 GAGAGGACCTGACTTTGTTTGC 59.450 50.000 0.00 0.00 0.00 3.68
843 897 1.531149 ACTTTGTTTGCGGTCATCTCG 59.469 47.619 0.00 0.00 0.00 4.04
850 904 1.029947 TGCGGTCATCTCGTCTGCTA 61.030 55.000 0.00 0.00 36.18 3.49
881 935 2.160417 GCTAGCACCATGTTCAGTTGTC 59.840 50.000 10.63 0.00 0.00 3.18
944 1001 0.247736 CCTGCGTCCTGAGCTACTTT 59.752 55.000 0.00 0.00 35.28 2.66
949 1006 1.467713 CGTCCTGAGCTACTTTCCGTC 60.468 57.143 0.00 0.00 0.00 4.79
974 1031 4.314440 AACTTCGGCTGCAGCGGA 62.314 61.111 36.55 36.55 46.41 5.54
1014 1071 3.466791 CTGAATGGAGGCCGCGGAT 62.467 63.158 33.48 17.60 0.00 4.18
1138 1195 5.013599 TCAGCTAGCTCTCTCCTCACATATA 59.986 44.000 16.15 0.00 0.00 0.86
1141 1198 6.953520 AGCTAGCTCTCTCCTCACATATATTT 59.046 38.462 12.68 0.00 0.00 1.40
1142 1199 7.454380 AGCTAGCTCTCTCCTCACATATATTTT 59.546 37.037 12.68 0.00 0.00 1.82
1190 1247 4.023193 ACATGGAGACCAAACGTTGATTTC 60.023 41.667 0.00 0.00 36.95 2.17
1191 1248 3.546724 TGGAGACCAAACGTTGATTTCA 58.453 40.909 0.00 0.00 0.00 2.69
1195 1252 3.247648 AGACCAAACGTTGATTTCAGACG 59.752 43.478 0.00 11.19 42.13 4.18
1231 1288 6.748333 AGTGCACTACGTAGTTTACTGATA 57.252 37.500 27.87 10.38 37.78 2.15
1232 1289 6.549952 AGTGCACTACGTAGTTTACTGATAC 58.450 40.000 27.87 18.07 37.78 2.24
1233 1290 6.373774 AGTGCACTACGTAGTTTACTGATACT 59.626 38.462 27.87 19.38 37.78 2.12
1234 1291 6.686253 GTGCACTACGTAGTTTACTGATACTC 59.314 42.308 25.35 2.31 37.78 2.59
1235 1292 6.183360 TGCACTACGTAGTTTACTGATACTCC 60.183 42.308 25.35 1.66 37.78 3.85
1236 1293 6.038050 GCACTACGTAGTTTACTGATACTCCT 59.962 42.308 25.35 0.00 37.78 3.69
1237 1294 7.414984 GCACTACGTAGTTTACTGATACTCCTT 60.415 40.741 25.35 0.00 37.78 3.36
1238 1295 8.457261 CACTACGTAGTTTACTGATACTCCTTT 58.543 37.037 25.35 0.00 37.78 3.11
1239 1296 8.672815 ACTACGTAGTTTACTGATACTCCTTTC 58.327 37.037 22.45 0.00 37.78 2.62
1240 1297 6.549952 ACGTAGTTTACTGATACTCCTTTCG 58.450 40.000 0.00 0.00 37.78 3.46
1241 1298 6.150140 ACGTAGTTTACTGATACTCCTTTCGT 59.850 38.462 0.00 0.00 37.78 3.85
1242 1299 7.025963 CGTAGTTTACTGATACTCCTTTCGTT 58.974 38.462 0.00 0.00 0.00 3.85
1243 1300 7.008086 CGTAGTTTACTGATACTCCTTTCGTTG 59.992 40.741 0.00 0.00 0.00 4.10
1244 1301 6.989659 AGTTTACTGATACTCCTTTCGTTGA 58.010 36.000 0.00 0.00 0.00 3.18
1245 1302 7.439381 AGTTTACTGATACTCCTTTCGTTGAA 58.561 34.615 0.00 0.00 0.00 2.69
1246 1303 7.384387 AGTTTACTGATACTCCTTTCGTTGAAC 59.616 37.037 0.00 0.00 0.00 3.18
1247 1304 4.235360 ACTGATACTCCTTTCGTTGAACG 58.765 43.478 12.12 12.12 44.19 3.95
1252 1309 0.302288 TCCTTTCGTTGAACGTTGCG 59.698 50.000 17.86 7.87 43.14 4.85
1262 1319 1.795872 TGAACGTTGCGATTCGATGTT 59.204 42.857 5.00 7.60 40.21 2.71
1264 1321 2.961522 ACGTTGCGATTCGATGTTTT 57.038 40.000 10.88 0.00 0.00 2.43
1265 1322 2.570169 ACGTTGCGATTCGATGTTTTG 58.430 42.857 10.88 0.00 0.00 2.44
1266 1323 2.222213 ACGTTGCGATTCGATGTTTTGA 59.778 40.909 10.88 0.00 0.00 2.69
1267 1324 2.834450 CGTTGCGATTCGATGTTTTGAG 59.166 45.455 10.88 0.00 0.00 3.02
1268 1325 3.664276 CGTTGCGATTCGATGTTTTGAGT 60.664 43.478 10.88 0.00 0.00 3.41
1269 1326 4.433674 CGTTGCGATTCGATGTTTTGAGTA 60.434 41.667 10.88 0.00 0.00 2.59
1272 1329 6.895607 TGCGATTCGATGTTTTGAGTAATA 57.104 33.333 10.88 0.00 0.00 0.98
1277 1334 7.435488 CGATTCGATGTTTTGAGTAATACTCCT 59.565 37.037 16.89 0.00 44.44 3.69
1279 1336 8.842358 TTCGATGTTTTGAGTAATACTCCTTT 57.158 30.769 16.89 0.00 44.44 3.11
1291 1348 7.173032 AGTAATACTCCTTTCGTCCCAAAAAT 58.827 34.615 0.00 0.00 0.00 1.82
1292 1349 6.911250 AATACTCCTTTCGTCCCAAAAATT 57.089 33.333 0.00 0.00 0.00 1.82
1294 1351 4.944048 ACTCCTTTCGTCCCAAAAATTTG 58.056 39.130 0.00 0.00 37.90 2.32
1295 1352 4.404394 ACTCCTTTCGTCCCAAAAATTTGT 59.596 37.500 5.27 0.00 36.45 2.83
1296 1353 4.939271 TCCTTTCGTCCCAAAAATTTGTC 58.061 39.130 5.27 0.00 36.45 3.18
1306 1364 7.865385 CGTCCCAAAAATTTGTCTTAGATTTGA 59.135 33.333 5.27 0.00 36.45 2.69
1336 1394 4.757657 ACTGATGTATCTAGCTAGACACGG 59.242 45.833 25.52 19.11 32.55 4.94
1341 1399 6.369059 TGTATCTAGCTAGACACGGTTTAC 57.631 41.667 25.52 20.03 32.55 2.01
1345 1403 2.685100 AGCTAGACACGGTTTACAAGC 58.315 47.619 0.00 0.00 0.00 4.01
1352 1410 3.183754 ACACGGTTTACAAGCTTTTTGC 58.816 40.909 0.00 0.00 43.29 3.68
1421 1481 9.469097 AGTATAGTTATGCTAGACATAGGAAGG 57.531 37.037 0.00 0.00 42.63 3.46
1426 1486 4.808767 TGCTAGACATAGGAAGGGTAGA 57.191 45.455 0.00 0.00 0.00 2.59
1438 1725 2.409948 AGGGTAGAGAACATTGCAGC 57.590 50.000 0.00 0.00 0.00 5.25
1494 1786 3.911661 AACACACTCCACTCGTACTAC 57.088 47.619 0.00 0.00 0.00 2.73
1536 1834 2.045131 GCCTTCCCTGCTGCTCTTG 61.045 63.158 0.00 0.00 0.00 3.02
1656 1986 5.604758 TCTATTCATGACAGGTGGAAGAG 57.395 43.478 0.00 0.00 31.66 2.85
1678 2008 6.992715 AGAGTATTTCAGTTATGTGTATGGCC 59.007 38.462 0.00 0.00 0.00 5.36
1702 2032 2.747396 TGGCATGGAAATCAGCAAAC 57.253 45.000 0.00 0.00 0.00 2.93
1732 2080 1.133976 AGCCCGAAGATGATTTGGGAG 60.134 52.381 15.81 0.00 42.77 4.30
1733 2081 1.972872 CCCGAAGATGATTTGGGAGG 58.027 55.000 7.07 0.00 42.77 4.30
1734 2082 1.212935 CCCGAAGATGATTTGGGAGGT 59.787 52.381 7.07 0.00 42.77 3.85
1735 2083 2.438021 CCCGAAGATGATTTGGGAGGTA 59.562 50.000 7.07 0.00 42.77 3.08
1784 2137 8.692710 CCTGTCTAGTATTTCCAGTTACACATA 58.307 37.037 0.00 0.00 0.00 2.29
1794 2147 5.847304 TCCAGTTACACATATGAGCAGATC 58.153 41.667 10.38 0.00 0.00 2.75
1809 2163 6.472016 TGAGCAGATCCAGTTTTTGTGTATA 58.528 36.000 0.00 0.00 0.00 1.47
1928 2282 2.856988 TTCCTTGGGGAAGCGGGT 60.857 61.111 0.00 0.00 45.72 5.28
1938 2292 0.101219 GGAAGCGGGTGCATGAATTC 59.899 55.000 0.00 0.00 46.23 2.17
2050 2404 6.817140 GGACTATGGTGAAGAATCGTTACTTT 59.183 38.462 0.00 0.00 0.00 2.66
2130 2500 7.837187 TGTTTTTATTAGGTTGGGGGAGAATAG 59.163 37.037 0.00 0.00 0.00 1.73
2131 2501 7.533923 TTTTATTAGGTTGGGGGAGAATAGT 57.466 36.000 0.00 0.00 0.00 2.12
2132 2502 8.641498 TTTTATTAGGTTGGGGGAGAATAGTA 57.359 34.615 0.00 0.00 0.00 1.82
2184 2556 9.713740 GATTCAGATAACATTCTGTTTCATGTC 57.286 33.333 0.00 0.00 43.02 3.06
2209 2581 4.880696 CAGGACAAATGGAGGAATCTTCTC 59.119 45.833 0.00 0.00 0.00 2.87
2227 2599 2.121963 AGAGCTTGTGGGGTCCCA 60.122 61.111 10.98 7.91 45.02 4.37
2241 2613 2.092323 GGTCCCATGCACCTCTAAAAC 58.908 52.381 0.00 0.00 0.00 2.43
2319 2692 9.846248 GGAATTCCAAGTATATTGCATTATCAC 57.154 33.333 20.04 3.29 35.64 3.06
2481 2895 4.319177 ACAACTAGCTGAGAATGACAACC 58.681 43.478 0.00 0.00 0.00 3.77
2543 2957 7.553881 AGTTAGCAACATCTAAATGCGTTAT 57.446 32.000 0.00 0.00 44.60 1.89
2599 3031 3.135712 TGTAAGAAGAGCCAGTGAAACCA 59.864 43.478 0.00 0.00 37.80 3.67
2693 3127 6.109359 GCTCTAGCAGATTCCAAACTTCTTA 58.891 40.000 0.00 0.00 41.59 2.10
2756 3192 3.004315 ACGGTCACCTTGTAAATGCTTTG 59.996 43.478 0.00 0.00 0.00 2.77
2828 3264 5.355071 ACACCATGCACTTGTTATCATACAG 59.645 40.000 0.00 0.00 0.00 2.74
2839 3275 9.167311 ACTTGTTATCATACAGAACATTTCTCC 57.833 33.333 0.00 0.00 38.11 3.71
2841 3277 8.722480 TGTTATCATACAGAACATTTCTCCAG 57.278 34.615 0.00 0.00 38.11 3.86
2842 3278 8.321353 TGTTATCATACAGAACATTTCTCCAGT 58.679 33.333 0.00 0.00 38.11 4.00
2865 3301 9.288576 CAGTGTGGGTATCAATCACATTAATAT 57.711 33.333 0.00 0.00 42.34 1.28
2956 3392 6.033966 AGATTTTTGTGGTTTCTTCGTCAAC 58.966 36.000 0.00 0.00 0.00 3.18
2966 3402 1.948834 TCTTCGTCAACGTGTGGTCTA 59.051 47.619 2.09 0.00 40.80 2.59
2974 3410 2.472695 ACGTGTGGTCTATGCAATGT 57.527 45.000 0.00 0.00 0.00 2.71
3001 3437 0.306840 CGCTCGACGCAACTATCCTA 59.693 55.000 7.47 0.00 39.08 2.94
3002 3438 1.268386 CGCTCGACGCAACTATCCTAA 60.268 52.381 7.47 0.00 39.08 2.69
3033 3469 9.683069 AAGAAGTGTTGTTTTCATGATAATGAC 57.317 29.630 0.00 2.36 0.00 3.06
3040 3476 9.409312 GTTGTTTTCATGATAATGACACAATCA 57.591 29.630 15.67 4.49 43.13 2.57
3155 3591 4.281941 TGCTGCCAACATGTTTGGTAATTA 59.718 37.500 20.87 8.87 41.53 1.40
3166 3602 9.189156 ACATGTTTGGTAATTAGCTACATGAAT 57.811 29.630 36.54 25.84 42.69 2.57
3167 3603 9.669353 CATGTTTGGTAATTAGCTACATGAATC 57.331 33.333 32.26 15.11 42.69 2.52
3168 3604 7.915508 TGTTTGGTAATTAGCTACATGAATCG 58.084 34.615 15.27 0.00 0.00 3.34
3169 3605 7.766738 TGTTTGGTAATTAGCTACATGAATCGA 59.233 33.333 15.27 0.00 0.00 3.59
3170 3606 7.946655 TTGGTAATTAGCTACATGAATCGAG 57.053 36.000 15.27 0.00 0.00 4.04
3171 3607 7.050970 TGGTAATTAGCTACATGAATCGAGT 57.949 36.000 15.27 0.00 0.00 4.18
3172 3608 8.173542 TGGTAATTAGCTACATGAATCGAGTA 57.826 34.615 15.27 0.00 0.00 2.59
3173 3609 8.080417 TGGTAATTAGCTACATGAATCGAGTAC 58.920 37.037 15.27 0.00 0.00 2.73
3174 3610 8.080417 GGTAATTAGCTACATGAATCGAGTACA 58.920 37.037 7.42 0.00 0.00 2.90
3175 3611 9.627395 GTAATTAGCTACATGAATCGAGTACAT 57.373 33.333 0.00 0.00 0.00 2.29
3176 3612 8.526218 AATTAGCTACATGAATCGAGTACATG 57.474 34.615 20.03 20.03 44.42 3.21
3177 3613 5.774498 AGCTACATGAATCGAGTACATGA 57.226 39.130 25.08 13.78 42.41 3.07
3178 3614 6.338214 AGCTACATGAATCGAGTACATGAT 57.662 37.500 25.08 16.07 42.41 2.45
3179 3615 6.155136 AGCTACATGAATCGAGTACATGATG 58.845 40.000 25.08 19.13 42.41 3.07
3180 3616 5.923114 GCTACATGAATCGAGTACATGATGT 59.077 40.000 25.08 2.65 42.41 3.06
3181 3617 6.128982 GCTACATGAATCGAGTACATGATGTG 60.129 42.308 25.08 16.05 42.41 3.21
3182 3618 5.052481 ACATGAATCGAGTACATGATGTGG 58.948 41.667 25.08 7.77 42.41 4.17
3183 3619 4.736126 TGAATCGAGTACATGATGTGGT 57.264 40.909 8.61 0.00 0.00 4.16
3184 3620 4.432712 TGAATCGAGTACATGATGTGGTG 58.567 43.478 8.61 0.00 0.00 4.17
3185 3621 2.293677 TCGAGTACATGATGTGGTGC 57.706 50.000 8.61 0.00 0.00 5.01
3186 3622 1.134818 TCGAGTACATGATGTGGTGCC 60.135 52.381 8.61 0.00 0.00 5.01
3187 3623 1.134699 CGAGTACATGATGTGGTGCCT 60.135 52.381 8.61 0.00 0.00 4.75
3188 3624 2.677902 CGAGTACATGATGTGGTGCCTT 60.678 50.000 8.61 0.00 0.00 4.35
3189 3625 2.939103 GAGTACATGATGTGGTGCCTTC 59.061 50.000 8.61 0.00 0.00 3.46
3190 3626 1.665679 GTACATGATGTGGTGCCTTCG 59.334 52.381 8.61 0.00 0.00 3.79
3191 3627 0.036732 ACATGATGTGGTGCCTTCGT 59.963 50.000 0.00 0.00 0.00 3.85
3192 3628 0.729116 CATGATGTGGTGCCTTCGTC 59.271 55.000 0.00 0.00 0.00 4.20
3193 3629 0.324614 ATGATGTGGTGCCTTCGTCA 59.675 50.000 9.70 9.70 0.00 4.35
3194 3630 0.107643 TGATGTGGTGCCTTCGTCAA 59.892 50.000 6.49 0.00 0.00 3.18
3195 3631 1.271325 TGATGTGGTGCCTTCGTCAAT 60.271 47.619 6.49 0.00 0.00 2.57
3196 3632 1.131126 GATGTGGTGCCTTCGTCAATG 59.869 52.381 0.00 0.00 0.00 2.82
3197 3633 0.179032 TGTGGTGCCTTCGTCAATGT 60.179 50.000 0.00 0.00 0.00 2.71
3198 3634 0.238289 GTGGTGCCTTCGTCAATGTG 59.762 55.000 0.00 0.00 0.00 3.21
3199 3635 0.179032 TGGTGCCTTCGTCAATGTGT 60.179 50.000 0.00 0.00 0.00 3.72
3200 3636 0.238289 GGTGCCTTCGTCAATGTGTG 59.762 55.000 0.00 0.00 0.00 3.82
3201 3637 1.225855 GTGCCTTCGTCAATGTGTGA 58.774 50.000 0.00 0.00 0.00 3.58
3202 3638 1.806542 GTGCCTTCGTCAATGTGTGAT 59.193 47.619 0.00 0.00 38.90 3.06
3203 3639 2.076100 TGCCTTCGTCAATGTGTGATC 58.924 47.619 0.00 0.00 38.90 2.92
3204 3640 2.289631 TGCCTTCGTCAATGTGTGATCT 60.290 45.455 0.00 0.00 38.90 2.75
3205 3641 2.744202 GCCTTCGTCAATGTGTGATCTT 59.256 45.455 0.00 0.00 38.90 2.40
3206 3642 3.181516 GCCTTCGTCAATGTGTGATCTTC 60.182 47.826 0.00 0.00 38.90 2.87
3207 3643 3.061295 CCTTCGTCAATGTGTGATCTTCG 59.939 47.826 0.00 0.00 38.90 3.79
3208 3644 3.297830 TCGTCAATGTGTGATCTTCGT 57.702 42.857 0.00 0.00 38.90 3.85
3209 3645 3.242518 TCGTCAATGTGTGATCTTCGTC 58.757 45.455 0.00 0.00 38.90 4.20
3210 3646 2.986479 CGTCAATGTGTGATCTTCGTCA 59.014 45.455 0.00 0.00 38.90 4.35
3211 3647 3.428534 CGTCAATGTGTGATCTTCGTCAA 59.571 43.478 0.00 0.00 38.90 3.18
3212 3648 4.091945 CGTCAATGTGTGATCTTCGTCAAT 59.908 41.667 0.00 0.00 38.90 2.57
3213 3649 5.319139 GTCAATGTGTGATCTTCGTCAATG 58.681 41.667 0.00 0.00 38.90 2.82
3214 3650 4.996758 TCAATGTGTGATCTTCGTCAATGT 59.003 37.500 0.00 0.00 0.00 2.71
3215 3651 6.090763 GTCAATGTGTGATCTTCGTCAATGTA 59.909 38.462 0.00 0.00 38.90 2.29
3216 3652 6.818142 TCAATGTGTGATCTTCGTCAATGTAT 59.182 34.615 0.00 0.00 0.00 2.29
3217 3653 6.594284 ATGTGTGATCTTCGTCAATGTATG 57.406 37.500 0.00 0.00 0.00 2.39
3218 3654 4.329801 TGTGTGATCTTCGTCAATGTATGC 59.670 41.667 0.00 0.00 0.00 3.14
3219 3655 4.568359 GTGTGATCTTCGTCAATGTATGCT 59.432 41.667 0.00 0.00 0.00 3.79
3220 3656 4.805719 TGTGATCTTCGTCAATGTATGCTC 59.194 41.667 0.00 0.00 0.00 4.26
3221 3657 5.046529 GTGATCTTCGTCAATGTATGCTCT 58.953 41.667 0.00 0.00 0.00 4.09
3222 3658 5.521735 GTGATCTTCGTCAATGTATGCTCTT 59.478 40.000 0.00 0.00 0.00 2.85
3223 3659 6.036517 GTGATCTTCGTCAATGTATGCTCTTT 59.963 38.462 0.00 0.00 0.00 2.52
3224 3660 5.784750 TCTTCGTCAATGTATGCTCTTTG 57.215 39.130 0.00 0.00 0.00 2.77
3225 3661 4.093408 TCTTCGTCAATGTATGCTCTTTGC 59.907 41.667 0.00 0.00 43.25 3.68
3237 3673 3.375782 GCTCTTTGCAAATGAAGTGGT 57.624 42.857 13.23 0.00 42.31 4.16
3238 3674 3.054878 GCTCTTTGCAAATGAAGTGGTG 58.945 45.455 13.23 1.47 42.31 4.17
3239 3675 3.054878 CTCTTTGCAAATGAAGTGGTGC 58.945 45.455 13.23 0.00 37.51 5.01
3240 3676 2.694628 TCTTTGCAAATGAAGTGGTGCT 59.305 40.909 13.23 0.00 37.87 4.40
3241 3677 3.888323 TCTTTGCAAATGAAGTGGTGCTA 59.112 39.130 13.23 0.00 37.87 3.49
3242 3678 3.921119 TTGCAAATGAAGTGGTGCTAG 57.079 42.857 0.00 0.00 37.87 3.42
3243 3679 2.862541 TGCAAATGAAGTGGTGCTAGT 58.137 42.857 0.00 0.00 37.87 2.57
3244 3680 3.221771 TGCAAATGAAGTGGTGCTAGTT 58.778 40.909 0.00 0.00 37.87 2.24
3245 3681 3.004629 TGCAAATGAAGTGGTGCTAGTTG 59.995 43.478 0.00 0.00 37.87 3.16
3246 3682 3.253188 GCAAATGAAGTGGTGCTAGTTGA 59.747 43.478 0.00 0.00 34.13 3.18
3247 3683 4.787598 CAAATGAAGTGGTGCTAGTTGAC 58.212 43.478 0.00 0.00 0.00 3.18
3248 3684 2.148916 TGAAGTGGTGCTAGTTGACG 57.851 50.000 0.00 0.00 0.00 4.35
3249 3685 1.684450 TGAAGTGGTGCTAGTTGACGA 59.316 47.619 0.00 0.00 0.00 4.20
3250 3686 2.299013 TGAAGTGGTGCTAGTTGACGAT 59.701 45.455 0.00 0.00 0.00 3.73
3251 3687 3.508402 TGAAGTGGTGCTAGTTGACGATA 59.492 43.478 0.00 0.00 0.00 2.92
3252 3688 3.784701 AGTGGTGCTAGTTGACGATAG 57.215 47.619 0.00 0.00 46.19 2.08
3264 3700 2.517875 CGATAGTCGGACGGGGGT 60.518 66.667 1.89 0.00 36.00 4.95
3265 3701 1.227943 CGATAGTCGGACGGGGGTA 60.228 63.158 1.89 0.00 36.00 3.69
3266 3702 0.819259 CGATAGTCGGACGGGGGTAA 60.819 60.000 1.89 0.00 36.00 2.85
3267 3703 1.402787 GATAGTCGGACGGGGGTAAA 58.597 55.000 1.89 0.00 0.00 2.01
3268 3704 1.966354 GATAGTCGGACGGGGGTAAAT 59.034 52.381 1.89 0.00 0.00 1.40
3269 3705 2.746279 TAGTCGGACGGGGGTAAATA 57.254 50.000 1.89 0.00 0.00 1.40
3270 3706 1.406903 AGTCGGACGGGGGTAAATAG 58.593 55.000 1.89 0.00 0.00 1.73
3271 3707 0.390492 GTCGGACGGGGGTAAATAGG 59.610 60.000 0.00 0.00 0.00 2.57
3272 3708 0.261402 TCGGACGGGGGTAAATAGGA 59.739 55.000 0.00 0.00 0.00 2.94
3273 3709 1.122227 CGGACGGGGGTAAATAGGAA 58.878 55.000 0.00 0.00 0.00 3.36
3274 3710 1.069668 CGGACGGGGGTAAATAGGAAG 59.930 57.143 0.00 0.00 0.00 3.46
3275 3711 2.121948 GGACGGGGGTAAATAGGAAGT 58.878 52.381 0.00 0.00 0.00 3.01
3276 3712 2.507058 GGACGGGGGTAAATAGGAAGTT 59.493 50.000 0.00 0.00 0.00 2.66
3277 3713 3.711190 GGACGGGGGTAAATAGGAAGTTA 59.289 47.826 0.00 0.00 0.00 2.24
3278 3714 4.202295 GGACGGGGGTAAATAGGAAGTTAG 60.202 50.000 0.00 0.00 0.00 2.34
3279 3715 4.623863 ACGGGGGTAAATAGGAAGTTAGA 58.376 43.478 0.00 0.00 0.00 2.10
3280 3716 4.652881 ACGGGGGTAAATAGGAAGTTAGAG 59.347 45.833 0.00 0.00 0.00 2.43
3281 3717 4.652881 CGGGGGTAAATAGGAAGTTAGAGT 59.347 45.833 0.00 0.00 0.00 3.24
3282 3718 5.129980 CGGGGGTAAATAGGAAGTTAGAGTT 59.870 44.000 0.00 0.00 0.00 3.01
3283 3719 6.324770 CGGGGGTAAATAGGAAGTTAGAGTTA 59.675 42.308 0.00 0.00 0.00 2.24
3284 3720 7.015974 CGGGGGTAAATAGGAAGTTAGAGTTAT 59.984 40.741 0.00 0.00 0.00 1.89
3285 3721 8.155510 GGGGGTAAATAGGAAGTTAGAGTTATG 58.844 40.741 0.00 0.00 0.00 1.90
3286 3722 8.155510 GGGGTAAATAGGAAGTTAGAGTTATGG 58.844 40.741 0.00 0.00 0.00 2.74
3287 3723 8.931568 GGGTAAATAGGAAGTTAGAGTTATGGA 58.068 37.037 0.00 0.00 0.00 3.41
3288 3724 9.984190 GGTAAATAGGAAGTTAGAGTTATGGAG 57.016 37.037 0.00 0.00 0.00 3.86
3304 3740 2.778299 TGGAGACAAACCTTGGAATCG 58.222 47.619 0.00 0.00 37.44 3.34
3305 3741 2.370519 TGGAGACAAACCTTGGAATCGA 59.629 45.455 0.00 0.00 37.44 3.59
3306 3742 3.181449 TGGAGACAAACCTTGGAATCGAA 60.181 43.478 0.00 0.00 37.44 3.71
3307 3743 3.818773 GGAGACAAACCTTGGAATCGAAA 59.181 43.478 0.00 0.00 34.12 3.46
3308 3744 4.083271 GGAGACAAACCTTGGAATCGAAAG 60.083 45.833 0.00 0.00 34.12 2.62
3310 3746 2.890945 ACAAACCTTGGAATCGAAAGGG 59.109 45.455 16.12 3.56 46.12 3.95
3311 3747 2.890945 CAAACCTTGGAATCGAAAGGGT 59.109 45.455 16.12 8.28 45.64 4.34
3312 3748 2.971901 ACCTTGGAATCGAAAGGGTT 57.028 45.000 16.12 0.00 46.12 4.11
3313 3749 3.238788 ACCTTGGAATCGAAAGGGTTT 57.761 42.857 16.12 0.00 46.12 3.27
3314 3750 4.376225 ACCTTGGAATCGAAAGGGTTTA 57.624 40.909 16.12 0.00 46.12 2.01
3315 3751 4.930696 ACCTTGGAATCGAAAGGGTTTAT 58.069 39.130 16.12 0.00 46.12 1.40
3316 3752 4.705023 ACCTTGGAATCGAAAGGGTTTATG 59.295 41.667 16.12 0.00 46.12 1.90
3317 3753 4.440112 CCTTGGAATCGAAAGGGTTTATGC 60.440 45.833 5.81 0.00 39.49 3.14
3318 3754 3.963129 TGGAATCGAAAGGGTTTATGCT 58.037 40.909 0.00 0.00 0.00 3.79
3319 3755 4.340617 TGGAATCGAAAGGGTTTATGCTT 58.659 39.130 0.00 0.00 0.00 3.91
3320 3756 5.502079 TGGAATCGAAAGGGTTTATGCTTA 58.498 37.500 0.00 0.00 0.00 3.09
3321 3757 5.588648 TGGAATCGAAAGGGTTTATGCTTAG 59.411 40.000 0.00 0.00 0.00 2.18
3322 3758 5.589050 GGAATCGAAAGGGTTTATGCTTAGT 59.411 40.000 0.00 0.00 0.00 2.24
3323 3759 6.764560 GGAATCGAAAGGGTTTATGCTTAGTA 59.235 38.462 0.00 0.00 0.00 1.82
3324 3760 7.041984 GGAATCGAAAGGGTTTATGCTTAGTAG 60.042 40.741 0.00 0.00 0.00 2.57
3325 3761 6.534475 TCGAAAGGGTTTATGCTTAGTAGA 57.466 37.500 0.00 0.00 0.00 2.59
3326 3762 6.938507 TCGAAAGGGTTTATGCTTAGTAGAA 58.061 36.000 0.00 0.00 0.00 2.10
3327 3763 6.815142 TCGAAAGGGTTTATGCTTAGTAGAAC 59.185 38.462 0.00 0.00 0.00 3.01
3328 3764 6.817140 CGAAAGGGTTTATGCTTAGTAGAACT 59.183 38.462 0.00 0.00 0.00 3.01
3329 3765 7.977853 CGAAAGGGTTTATGCTTAGTAGAACTA 59.022 37.037 0.00 0.00 0.00 2.24
3330 3766 9.662947 GAAAGGGTTTATGCTTAGTAGAACTAA 57.337 33.333 0.03 0.03 38.28 2.24
3340 3776 9.819267 ATGCTTAGTAGAACTAAAATCCAGTAC 57.181 33.333 1.55 0.00 39.89 2.73
3341 3777 8.809066 TGCTTAGTAGAACTAAAATCCAGTACA 58.191 33.333 0.00 0.00 39.89 2.90
3342 3778 9.819267 GCTTAGTAGAACTAAAATCCAGTACAT 57.181 33.333 0.00 0.00 39.89 2.29
3346 3782 9.823647 AGTAGAACTAAAATCCAGTACATGATG 57.176 33.333 0.00 0.00 0.00 3.07
3347 3783 9.601217 GTAGAACTAAAATCCAGTACATGATGT 57.399 33.333 2.65 2.65 0.00 3.06
3348 3784 8.498054 AGAACTAAAATCCAGTACATGATGTG 57.502 34.615 8.61 0.00 0.00 3.21
3349 3785 6.683974 ACTAAAATCCAGTACATGATGTGC 57.316 37.500 8.61 6.98 32.95 4.57
3350 3786 6.179756 ACTAAAATCCAGTACATGATGTGCA 58.820 36.000 15.78 0.00 35.34 4.57
3351 3787 5.571784 AAAATCCAGTACATGATGTGCAG 57.428 39.130 15.78 7.70 35.34 4.41
3352 3788 3.920231 ATCCAGTACATGATGTGCAGT 57.080 42.857 15.78 0.00 35.34 4.40
3353 3789 3.701205 TCCAGTACATGATGTGCAGTT 57.299 42.857 15.78 0.00 35.34 3.16
3354 3790 4.019792 TCCAGTACATGATGTGCAGTTT 57.980 40.909 15.78 0.00 35.34 2.66
3355 3791 4.002982 TCCAGTACATGATGTGCAGTTTC 58.997 43.478 15.78 0.00 35.34 2.78
3356 3792 3.752747 CCAGTACATGATGTGCAGTTTCA 59.247 43.478 15.78 0.00 35.34 2.69
3357 3793 4.142752 CCAGTACATGATGTGCAGTTTCAG 60.143 45.833 15.78 0.00 35.34 3.02
3358 3794 4.453478 CAGTACATGATGTGCAGTTTCAGT 59.547 41.667 15.78 0.00 35.34 3.41
3359 3795 5.639082 CAGTACATGATGTGCAGTTTCAGTA 59.361 40.000 15.78 0.00 35.34 2.74
3360 3796 5.639506 AGTACATGATGTGCAGTTTCAGTAC 59.360 40.000 15.78 15.75 35.34 2.73
3361 3797 4.645535 ACATGATGTGCAGTTTCAGTACT 58.354 39.130 0.00 0.00 0.00 2.73
3362 3798 5.793817 ACATGATGTGCAGTTTCAGTACTA 58.206 37.500 0.00 0.00 0.00 1.82
3363 3799 5.871524 ACATGATGTGCAGTTTCAGTACTAG 59.128 40.000 0.00 0.00 0.00 2.57
3364 3800 5.468540 TGATGTGCAGTTTCAGTACTAGT 57.531 39.130 0.00 0.00 0.00 2.57
3365 3801 6.584185 TGATGTGCAGTTTCAGTACTAGTA 57.416 37.500 0.00 0.00 0.00 1.82
3366 3802 6.621613 TGATGTGCAGTTTCAGTACTAGTAG 58.378 40.000 1.87 0.00 0.00 2.57
3367 3803 5.386958 TGTGCAGTTTCAGTACTAGTAGG 57.613 43.478 1.87 0.00 0.00 3.18
3368 3804 4.831155 TGTGCAGTTTCAGTACTAGTAGGT 59.169 41.667 1.87 0.00 0.00 3.08
3369 3805 5.162075 GTGCAGTTTCAGTACTAGTAGGTG 58.838 45.833 1.87 4.41 0.00 4.00
3370 3806 4.831155 TGCAGTTTCAGTACTAGTAGGTGT 59.169 41.667 1.87 0.00 0.00 4.16
3371 3807 5.162075 GCAGTTTCAGTACTAGTAGGTGTG 58.838 45.833 1.87 0.00 0.00 3.82
3372 3808 5.048224 GCAGTTTCAGTACTAGTAGGTGTGA 60.048 44.000 1.87 1.80 0.00 3.58
3373 3809 6.613233 CAGTTTCAGTACTAGTAGGTGTGAG 58.387 44.000 1.87 0.00 0.00 3.51
3374 3810 5.711036 AGTTTCAGTACTAGTAGGTGTGAGG 59.289 44.000 1.87 0.00 0.00 3.86
3375 3811 5.509832 TTCAGTACTAGTAGGTGTGAGGA 57.490 43.478 1.87 0.00 0.00 3.71
3376 3812 5.100344 TCAGTACTAGTAGGTGTGAGGAG 57.900 47.826 1.87 0.00 0.00 3.69
3377 3813 4.080469 TCAGTACTAGTAGGTGTGAGGAGG 60.080 50.000 1.87 0.00 0.00 4.30
3378 3814 4.080469 CAGTACTAGTAGGTGTGAGGAGGA 60.080 50.000 1.87 0.00 0.00 3.71
3379 3815 3.655615 ACTAGTAGGTGTGAGGAGGAG 57.344 52.381 1.45 0.00 0.00 3.69
3380 3816 2.242708 ACTAGTAGGTGTGAGGAGGAGG 59.757 54.545 1.45 0.00 0.00 4.30
3381 3817 1.383963 AGTAGGTGTGAGGAGGAGGA 58.616 55.000 0.00 0.00 0.00 3.71
3382 3818 1.286553 AGTAGGTGTGAGGAGGAGGAG 59.713 57.143 0.00 0.00 0.00 3.69
3383 3819 0.631753 TAGGTGTGAGGAGGAGGAGG 59.368 60.000 0.00 0.00 0.00 4.30
3384 3820 1.079438 GGTGTGAGGAGGAGGAGGT 59.921 63.158 0.00 0.00 0.00 3.85
3385 3821 0.545548 GGTGTGAGGAGGAGGAGGTT 60.546 60.000 0.00 0.00 0.00 3.50
3386 3822 1.273098 GGTGTGAGGAGGAGGAGGTTA 60.273 57.143 0.00 0.00 0.00 2.85
3387 3823 2.104170 GTGTGAGGAGGAGGAGGTTAG 58.896 57.143 0.00 0.00 0.00 2.34
3388 3824 1.116308 GTGAGGAGGAGGAGGTTAGC 58.884 60.000 0.00 0.00 0.00 3.09
3389 3825 0.032017 TGAGGAGGAGGAGGTTAGCC 60.032 60.000 0.00 0.00 0.00 3.93
3400 3836 1.446016 AGGTTAGCCTTGAAGGTGGT 58.554 50.000 13.58 0.66 44.18 4.16
3401 3837 2.627933 AGGTTAGCCTTGAAGGTGGTA 58.372 47.619 13.58 0.00 44.18 3.25
3402 3838 2.305052 AGGTTAGCCTTGAAGGTGGTAC 59.695 50.000 13.58 6.28 44.18 3.34
3403 3839 2.617276 GGTTAGCCTTGAAGGTGGTACC 60.617 54.545 13.58 4.43 37.80 3.34
3414 3850 1.640917 GGTGGTACCTCAGAAGGACA 58.359 55.000 14.36 0.00 46.67 4.02
3415 3851 1.275573 GGTGGTACCTCAGAAGGACAC 59.724 57.143 14.36 0.00 46.67 3.67
3416 3852 1.275573 GTGGTACCTCAGAAGGACACC 59.724 57.143 14.36 10.93 46.67 4.16
3417 3853 1.149288 TGGTACCTCAGAAGGACACCT 59.851 52.381 14.36 0.00 46.67 4.00
3419 3855 2.638363 GGTACCTCAGAAGGACACCTTT 59.362 50.000 4.06 0.00 44.82 3.11
3420 3856 3.072622 GGTACCTCAGAAGGACACCTTTT 59.927 47.826 4.06 0.00 44.82 2.27
3421 3857 3.214696 ACCTCAGAAGGACACCTTTTG 57.785 47.619 12.78 12.78 44.82 2.44
3429 3865 8.792830 TCAGAAGGACACCTTTTGATATTTAG 57.207 34.615 16.22 0.00 45.63 1.85
3430 3866 7.829211 TCAGAAGGACACCTTTTGATATTTAGG 59.171 37.037 16.22 0.00 45.63 2.69
3431 3867 7.067494 CAGAAGGACACCTTTTGATATTTAGGG 59.933 40.741 13.47 0.00 45.13 3.53
3432 3868 6.402981 AGGACACCTTTTGATATTTAGGGT 57.597 37.500 0.00 0.00 31.91 4.34
3433 3869 6.424032 AGGACACCTTTTGATATTTAGGGTC 58.576 40.000 0.00 0.00 32.15 4.46
3434 3870 6.011981 AGGACACCTTTTGATATTTAGGGTCA 60.012 38.462 0.00 0.00 33.40 4.02
3435 3871 6.661805 GGACACCTTTTGATATTTAGGGTCAA 59.338 38.462 0.00 0.00 33.40 3.18
3436 3872 7.342026 GGACACCTTTTGATATTTAGGGTCAAT 59.658 37.037 0.00 0.00 33.40 2.57
3437 3873 8.066612 ACACCTTTTGATATTTAGGGTCAATG 57.933 34.615 0.00 0.00 32.48 2.82
3438 3874 6.980397 CACCTTTTGATATTTAGGGTCAATGC 59.020 38.462 0.00 0.00 32.48 3.56
3439 3875 6.897413 ACCTTTTGATATTTAGGGTCAATGCT 59.103 34.615 0.00 0.00 32.48 3.79
3440 3876 8.058847 ACCTTTTGATATTTAGGGTCAATGCTA 58.941 33.333 0.00 0.00 32.48 3.49
3441 3877 8.352942 CCTTTTGATATTTAGGGTCAATGCTAC 58.647 37.037 0.00 0.00 32.48 3.58
3442 3878 8.815565 TTTTGATATTTAGGGTCAATGCTACA 57.184 30.769 0.00 0.00 32.48 2.74
3443 3879 8.450578 TTTGATATTTAGGGTCAATGCTACAG 57.549 34.615 0.00 0.00 32.48 2.74
3444 3880 6.533730 TGATATTTAGGGTCAATGCTACAGG 58.466 40.000 0.00 0.00 0.00 4.00
3445 3881 6.328934 TGATATTTAGGGTCAATGCTACAGGA 59.671 38.462 0.00 0.00 0.00 3.86
3446 3882 4.487714 TTTAGGGTCAATGCTACAGGAG 57.512 45.455 0.00 0.00 0.00 3.69
3447 3883 1.207791 AGGGTCAATGCTACAGGAGG 58.792 55.000 0.00 0.00 0.00 4.30
3448 3884 1.204146 GGGTCAATGCTACAGGAGGA 58.796 55.000 0.00 0.00 0.00 3.71
3449 3885 1.771255 GGGTCAATGCTACAGGAGGAT 59.229 52.381 0.00 0.00 37.96 3.24
3450 3886 2.486191 GGGTCAATGCTACAGGAGGATG 60.486 54.545 0.00 0.00 36.14 3.51
3451 3887 2.486191 GGTCAATGCTACAGGAGGATGG 60.486 54.545 0.00 0.00 36.14 3.51
3452 3888 1.770658 TCAATGCTACAGGAGGATGGG 59.229 52.381 0.00 0.00 36.14 4.00
3453 3889 1.143813 AATGCTACAGGAGGATGGGG 58.856 55.000 0.00 0.00 36.14 4.96
3454 3890 0.769776 ATGCTACAGGAGGATGGGGG 60.770 60.000 0.00 0.00 34.37 5.40
3455 3891 1.384643 GCTACAGGAGGATGGGGGT 60.385 63.158 0.00 0.00 0.00 4.95
3456 3892 0.105142 GCTACAGGAGGATGGGGGTA 60.105 60.000 0.00 0.00 0.00 3.69
3457 3893 1.485210 GCTACAGGAGGATGGGGGTAT 60.485 57.143 0.00 0.00 0.00 2.73
3458 3894 2.991580 CTACAGGAGGATGGGGGTATT 58.008 52.381 0.00 0.00 0.00 1.89
3459 3895 1.522900 ACAGGAGGATGGGGGTATTG 58.477 55.000 0.00 0.00 0.00 1.90
3460 3896 1.010793 ACAGGAGGATGGGGGTATTGA 59.989 52.381 0.00 0.00 0.00 2.57
3461 3897 2.352371 CAGGAGGATGGGGGTATTGAT 58.648 52.381 0.00 0.00 0.00 2.57
3462 3898 3.115962 ACAGGAGGATGGGGGTATTGATA 60.116 47.826 0.00 0.00 0.00 2.15
3463 3899 3.916349 CAGGAGGATGGGGGTATTGATAA 59.084 47.826 0.00 0.00 0.00 1.75
3464 3900 4.353788 CAGGAGGATGGGGGTATTGATAAA 59.646 45.833 0.00 0.00 0.00 1.40
3465 3901 4.354087 AGGAGGATGGGGGTATTGATAAAC 59.646 45.833 0.00 0.00 0.00 2.01
3466 3902 4.105697 GGAGGATGGGGGTATTGATAAACA 59.894 45.833 0.00 0.00 0.00 2.83
3467 3903 5.222337 GGAGGATGGGGGTATTGATAAACAT 60.222 44.000 0.00 0.00 0.00 2.71
3468 3904 5.644188 AGGATGGGGGTATTGATAAACATG 58.356 41.667 0.00 0.00 0.00 3.21
3469 3905 5.136048 AGGATGGGGGTATTGATAAACATGT 59.864 40.000 0.00 0.00 0.00 3.21
3470 3906 5.243730 GGATGGGGGTATTGATAAACATGTG 59.756 44.000 0.00 0.00 0.00 3.21
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 3.940657 GCAAATCTGCTGCTACTGTAG 57.059 47.619 10.48 10.48 45.74 2.74
18 19 5.691754 GTCTTTGTTTACCAAGGCAAATCTG 59.308 40.000 0.00 0.00 33.75 2.90
19 20 5.598417 AGTCTTTGTTTACCAAGGCAAATCT 59.402 36.000 1.85 0.00 33.75 2.40
20 21 5.691754 CAGTCTTTGTTTACCAAGGCAAATC 59.308 40.000 1.85 0.00 33.75 2.17
21 22 5.128663 ACAGTCTTTGTTTACCAAGGCAAAT 59.871 36.000 1.85 0.00 36.31 2.32
22 23 4.464597 ACAGTCTTTGTTTACCAAGGCAAA 59.535 37.500 1.85 0.00 36.31 3.68
23 24 4.020543 ACAGTCTTTGTTTACCAAGGCAA 58.979 39.130 1.85 0.00 36.31 4.52
24 25 3.380004 CACAGTCTTTGTTTACCAAGGCA 59.620 43.478 1.85 0.00 38.16 4.75
25 26 3.380320 ACACAGTCTTTGTTTACCAAGGC 59.620 43.478 0.00 0.00 38.16 4.35
26 27 4.202010 CCACACAGTCTTTGTTTACCAAGG 60.202 45.833 0.00 0.00 38.16 3.61
27 28 4.202010 CCCACACAGTCTTTGTTTACCAAG 60.202 45.833 0.00 0.00 38.16 3.61
28 29 3.697045 CCCACACAGTCTTTGTTTACCAA 59.303 43.478 0.00 0.00 38.16 3.67
29 30 3.283751 CCCACACAGTCTTTGTTTACCA 58.716 45.455 0.00 0.00 38.16 3.25
30 31 3.284617 ACCCACACAGTCTTTGTTTACC 58.715 45.455 0.00 0.00 38.16 2.85
31 32 3.314357 GGACCCACACAGTCTTTGTTTAC 59.686 47.826 0.00 0.00 38.16 2.01
44 45 2.258726 GCGACCAAAGGACCCACAC 61.259 63.158 0.00 0.00 0.00 3.82
63 64 1.974249 ATAGCGCGTGTCGTTCTCGA 61.974 55.000 8.43 0.00 44.12 4.04
64 65 1.582937 ATAGCGCGTGTCGTTCTCG 60.583 57.895 8.43 0.00 41.07 4.04
66 67 0.448990 TACATAGCGCGTGTCGTTCT 59.551 50.000 21.75 0.00 41.07 3.01
76 77 2.028631 GGGACCCGTACATAGCGC 59.971 66.667 0.00 0.00 0.00 5.92
80 81 2.762327 GTCAAAGAGGGACCCGTACATA 59.238 50.000 4.40 0.00 0.00 2.29
85 86 1.192803 GGAGTCAAAGAGGGACCCGT 61.193 60.000 4.40 0.00 35.89 5.28
86 87 1.597461 GGAGTCAAAGAGGGACCCG 59.403 63.158 4.40 0.00 35.89 5.28
94 95 2.970639 CTCCGCCGGAGTCAAAGA 59.029 61.111 24.93 0.00 44.25 2.52
108 127 1.830477 AGTGATGGCTCTCTGTTCTCC 59.170 52.381 0.00 0.00 0.00 3.71
119 138 0.543749 GCTACCTGGAAGTGATGGCT 59.456 55.000 0.00 0.00 0.00 4.75
120 139 0.543749 AGCTACCTGGAAGTGATGGC 59.456 55.000 0.00 0.00 0.00 4.40
147 167 3.755378 GGAAAGACGACAGTAGTGGAGTA 59.245 47.826 1.92 0.00 0.00 2.59
156 176 2.559231 GAGGAAGAGGAAAGACGACAGT 59.441 50.000 0.00 0.00 0.00 3.55
157 177 2.823154 AGAGGAAGAGGAAAGACGACAG 59.177 50.000 0.00 0.00 0.00 3.51
159 179 3.367600 GGAAGAGGAAGAGGAAAGACGAC 60.368 52.174 0.00 0.00 0.00 4.34
163 183 2.552367 GGGGAAGAGGAAGAGGAAAGA 58.448 52.381 0.00 0.00 0.00 2.52
164 184 1.208293 CGGGGAAGAGGAAGAGGAAAG 59.792 57.143 0.00 0.00 0.00 2.62
165 185 1.276622 CGGGGAAGAGGAAGAGGAAA 58.723 55.000 0.00 0.00 0.00 3.13
169 189 1.306226 ACCCGGGGAAGAGGAAGAG 60.306 63.158 27.92 0.00 0.00 2.85
172 192 2.285144 GGACCCGGGGAAGAGGAA 60.285 66.667 27.92 0.00 0.00 3.36
202 225 4.873129 CGGGCCTGTCATCGTCGG 62.873 72.222 2.29 0.00 0.00 4.79
293 317 1.117150 TGAGGACAGTATTACCCGGC 58.883 55.000 0.00 0.00 0.00 6.13
315 339 3.942829 CAGCCTATGGAGTTCTCAAACA 58.057 45.455 2.24 0.00 37.88 2.83
340 364 0.541863 CCCGTGCATTCCTAAGTCCT 59.458 55.000 0.00 0.00 0.00 3.85
347 371 3.411517 CCCCTCCCGTGCATTCCT 61.412 66.667 0.00 0.00 0.00 3.36
365 389 1.283613 TGACCACAACCAAAGTCAGGT 59.716 47.619 0.00 0.00 42.34 4.00
378 402 3.131755 CAGTAGCAGATGAGATGACCACA 59.868 47.826 0.00 0.00 0.00 4.17
379 403 3.715495 CAGTAGCAGATGAGATGACCAC 58.285 50.000 0.00 0.00 0.00 4.16
380 404 2.102084 GCAGTAGCAGATGAGATGACCA 59.898 50.000 0.00 0.00 41.58 4.02
463 492 1.699083 TCCAAGCACAGGACTGATCAA 59.301 47.619 6.29 0.00 0.00 2.57
466 495 1.356124 ACTCCAAGCACAGGACTGAT 58.644 50.000 6.29 0.00 0.00 2.90
468 497 1.338200 GGTACTCCAAGCACAGGACTG 60.338 57.143 0.00 0.00 0.00 3.51
475 504 1.741770 CTGCCGGTACTCCAAGCAC 60.742 63.158 1.90 0.00 37.61 4.40
482 519 1.133407 CTCTGTTCTCTGCCGGTACTC 59.867 57.143 1.90 0.00 0.00 2.59
512 549 1.820519 GATGGAGTGGCAAGCAATGAA 59.179 47.619 0.00 0.00 0.00 2.57
513 550 1.466856 GATGGAGTGGCAAGCAATGA 58.533 50.000 0.00 0.00 0.00 2.57
514 551 0.458669 GGATGGAGTGGCAAGCAATG 59.541 55.000 0.00 0.00 0.00 2.82
515 552 1.033746 CGGATGGAGTGGCAAGCAAT 61.034 55.000 0.00 0.00 0.00 3.56
520 558 1.191489 TGAGACGGATGGAGTGGCAA 61.191 55.000 0.00 0.00 0.00 4.52
521 559 1.191489 TTGAGACGGATGGAGTGGCA 61.191 55.000 0.00 0.00 0.00 4.92
594 633 2.527100 CGTCCGAAGATAAGTGTGTCC 58.473 52.381 0.00 0.00 0.00 4.02
597 636 2.479730 CCTCCGTCCGAAGATAAGTGTG 60.480 54.545 0.00 0.00 0.00 3.82
614 653 0.912486 ACAGCAGTGGTATTCCCTCC 59.088 55.000 0.00 0.00 0.00 4.30
629 668 0.793250 GGAAGAAGCGTGAGAACAGC 59.207 55.000 0.00 0.00 0.00 4.40
673 726 2.668280 GCGGCGAAGAACACTGGAC 61.668 63.158 12.98 0.00 0.00 4.02
705 758 4.651008 GAACGTGGTCCGGCGACA 62.651 66.667 9.30 0.80 41.13 4.35
736 790 3.076484 AGGATTACCTGGCCAATGCATAT 59.924 43.478 7.01 0.00 45.92 1.78
737 791 2.446666 AGGATTACCTGGCCAATGCATA 59.553 45.455 7.01 0.00 45.92 3.14
738 792 1.218704 AGGATTACCTGGCCAATGCAT 59.781 47.619 7.01 0.00 45.92 3.96
739 793 0.630673 AGGATTACCTGGCCAATGCA 59.369 50.000 7.01 0.00 45.92 3.96
740 794 3.520623 AGGATTACCTGGCCAATGC 57.479 52.632 7.01 2.09 45.92 3.56
818 872 1.021968 GACCGCAAACAAAGTCAGGT 58.978 50.000 0.00 0.00 0.00 4.00
833 887 1.018148 AGTAGCAGACGAGATGACCG 58.982 55.000 0.00 0.00 0.00 4.79
944 1001 1.006571 GAAGTTGCAGGACGACGGA 60.007 57.895 0.00 0.00 37.78 4.69
949 1006 2.357517 AGCCGAAGTTGCAGGACG 60.358 61.111 0.00 0.00 0.00 4.79
974 1031 1.197430 AGCAGCTACCACAGGAGCTT 61.197 55.000 0.00 0.00 46.99 3.74
976 1033 1.153469 GAGCAGCTACCACAGGAGC 60.153 63.158 0.00 0.00 39.08 4.70
977 1034 1.140589 CGAGCAGCTACCACAGGAG 59.859 63.158 0.00 0.00 0.00 3.69
978 1035 3.006756 GCGAGCAGCTACCACAGGA 62.007 63.158 0.00 0.00 44.04 3.86
979 1036 2.510238 GCGAGCAGCTACCACAGG 60.510 66.667 0.00 0.00 44.04 4.00
1014 1071 1.865788 GCGCCCAAATCTGCACTTCA 61.866 55.000 0.00 0.00 0.00 3.02
1141 1198 3.013219 TGCCGCATGTCTAGCATAAAAA 58.987 40.909 0.00 0.00 35.74 1.94
1142 1199 2.613595 CTGCCGCATGTCTAGCATAAAA 59.386 45.455 0.00 0.00 35.74 1.52
1160 1217 3.003480 GTTTGGTCTCCATGTACTCTGC 58.997 50.000 0.00 0.00 31.53 4.26
1190 1247 4.269123 TGCACTTGTAAGTTGTAACGTCTG 59.731 41.667 0.00 0.00 37.08 3.51
1191 1248 4.269363 GTGCACTTGTAAGTTGTAACGTCT 59.731 41.667 10.32 0.00 37.08 4.18
1195 1252 5.232838 ACGTAGTGCACTTGTAAGTTGTAAC 59.767 40.000 27.06 11.18 42.51 2.50
1196 1253 5.350633 ACGTAGTGCACTTGTAAGTTGTAA 58.649 37.500 27.06 0.00 42.51 2.41
1197 1254 4.935702 ACGTAGTGCACTTGTAAGTTGTA 58.064 39.130 27.06 0.00 42.51 2.41
1198 1255 3.788937 ACGTAGTGCACTTGTAAGTTGT 58.211 40.909 27.06 9.13 42.51 3.32
1199 1256 4.980434 ACTACGTAGTGCACTTGTAAGTTG 59.020 41.667 26.87 17.49 45.73 3.16
1200 1257 5.192327 ACTACGTAGTGCACTTGTAAGTT 57.808 39.130 26.87 11.84 45.73 2.66
1201 1258 4.843220 ACTACGTAGTGCACTTGTAAGT 57.157 40.909 26.87 19.59 45.73 2.24
1231 1288 1.329599 GCAACGTTCAACGAAAGGAGT 59.670 47.619 18.84 0.00 46.05 3.85
1232 1289 1.656429 CGCAACGTTCAACGAAAGGAG 60.656 52.381 18.84 0.74 46.05 3.69
1233 1290 0.302288 CGCAACGTTCAACGAAAGGA 59.698 50.000 18.84 0.00 46.05 3.36
1234 1291 0.302288 TCGCAACGTTCAACGAAAGG 59.698 50.000 18.84 3.80 46.05 3.11
1235 1292 2.294479 ATCGCAACGTTCAACGAAAG 57.706 45.000 18.84 6.80 46.05 2.62
1236 1293 2.631158 GAATCGCAACGTTCAACGAAA 58.369 42.857 18.84 0.00 46.05 3.46
1237 1294 1.396192 CGAATCGCAACGTTCAACGAA 60.396 47.619 18.84 0.00 46.05 3.85
1238 1295 0.159973 CGAATCGCAACGTTCAACGA 59.840 50.000 18.84 16.85 46.05 3.85
1240 1297 2.158143 CATCGAATCGCAACGTTCAAC 58.842 47.619 0.00 0.00 0.00 3.18
1241 1298 1.795872 ACATCGAATCGCAACGTTCAA 59.204 42.857 0.00 0.00 0.00 2.69
1242 1299 1.424403 ACATCGAATCGCAACGTTCA 58.576 45.000 0.00 0.00 0.00 3.18
1243 1300 2.503943 AACATCGAATCGCAACGTTC 57.496 45.000 0.00 0.00 0.00 3.95
1244 1301 2.961522 AAACATCGAATCGCAACGTT 57.038 40.000 0.00 0.00 0.00 3.99
1245 1302 2.222213 TCAAAACATCGAATCGCAACGT 59.778 40.909 0.00 0.00 0.00 3.99
1246 1303 2.833497 TCAAAACATCGAATCGCAACG 58.167 42.857 0.00 0.00 0.00 4.10
1247 1304 3.810373 ACTCAAAACATCGAATCGCAAC 58.190 40.909 0.00 0.00 0.00 4.17
1252 1309 8.649973 AGGAGTATTACTCAAAACATCGAATC 57.350 34.615 22.10 3.71 46.79 2.52
1262 1319 5.246656 TGGGACGAAAGGAGTATTACTCAAA 59.753 40.000 22.10 0.00 46.79 2.69
1264 1321 4.346730 TGGGACGAAAGGAGTATTACTCA 58.653 43.478 22.10 0.00 46.79 3.41
1265 1322 4.996788 TGGGACGAAAGGAGTATTACTC 57.003 45.455 14.34 14.34 44.32 2.59
1266 1323 5.750352 TTTGGGACGAAAGGAGTATTACT 57.250 39.130 0.00 0.00 0.00 2.24
1267 1324 6.806388 TTTTTGGGACGAAAGGAGTATTAC 57.194 37.500 0.00 0.00 0.00 1.89
1268 1325 8.301002 CAAATTTTTGGGACGAAAGGAGTATTA 58.699 33.333 0.00 0.00 34.59 0.98
1269 1326 6.911250 AATTTTTGGGACGAAAGGAGTATT 57.089 33.333 0.00 0.00 0.00 1.89
1272 1329 4.404394 ACAAATTTTTGGGACGAAAGGAGT 59.596 37.500 7.85 0.00 42.34 3.85
1277 1334 7.336161 TCTAAGACAAATTTTTGGGACGAAA 57.664 32.000 7.85 0.00 42.34 3.46
1279 1336 7.519032 AATCTAAGACAAATTTTTGGGACGA 57.481 32.000 7.85 0.00 42.34 4.20
1315 1373 4.715713 ACCGTGTCTAGCTAGATACATCA 58.284 43.478 35.41 22.94 42.42 3.07
1356 1414 9.366216 GTGCACGGACAAATATATCATCTTATA 57.634 33.333 0.00 0.00 0.00 0.98
1357 1415 7.334421 GGTGCACGGACAAATATATCATCTTAT 59.666 37.037 11.45 0.00 0.00 1.73
1358 1416 6.649141 GGTGCACGGACAAATATATCATCTTA 59.351 38.462 11.45 0.00 0.00 2.10
1359 1417 5.470098 GGTGCACGGACAAATATATCATCTT 59.530 40.000 11.45 0.00 0.00 2.40
1362 1420 4.072131 GGGTGCACGGACAAATATATCAT 58.928 43.478 11.45 0.00 0.00 2.45
1364 1422 3.740115 AGGGTGCACGGACAAATATATC 58.260 45.455 11.45 0.00 0.00 1.63
1414 1474 4.101114 TGCAATGTTCTCTACCCTTCCTA 58.899 43.478 0.00 0.00 0.00 2.94
1421 1481 3.077359 AGTTGCTGCAATGTTCTCTACC 58.923 45.455 19.11 1.29 0.00 3.18
1426 1486 2.554032 GGTGTAGTTGCTGCAATGTTCT 59.446 45.455 19.11 12.83 0.00 3.01
1438 1725 1.007336 GCAGACGACGGGTGTAGTTG 61.007 60.000 0.00 0.00 33.81 3.16
1494 1786 3.548014 CCTGCTACACCTGTTTGTTTTCG 60.548 47.826 0.00 0.00 0.00 3.46
1527 1820 1.242076 TCCTTTTGAGCAAGAGCAGC 58.758 50.000 0.00 0.00 45.49 5.25
1528 1821 2.883386 AGTTCCTTTTGAGCAAGAGCAG 59.117 45.455 0.00 0.00 45.49 4.24
1536 1834 1.801178 CGGACAGAGTTCCTTTTGAGC 59.199 52.381 0.00 0.00 32.88 4.26
1656 1986 7.282224 TCAAGGCCATACACATAACTGAAATAC 59.718 37.037 5.01 0.00 0.00 1.89
1678 2008 2.429250 TGCTGATTTCCATGCCATCAAG 59.571 45.455 0.00 0.00 0.00 3.02
1702 2032 1.165907 TCTTCGGGCTGTTGTGCAAG 61.166 55.000 0.00 0.00 34.04 4.01
1711 2041 1.027357 CCCAAATCATCTTCGGGCTG 58.973 55.000 0.00 0.00 0.00 4.85
1732 2080 5.621193 AGCATAATTGACATGGTACCTACC 58.379 41.667 14.36 0.46 46.62 3.18
1733 2081 7.549488 GGATAGCATAATTGACATGGTACCTAC 59.451 40.741 14.36 2.59 38.71 3.18
1734 2082 7.457852 AGGATAGCATAATTGACATGGTACCTA 59.542 37.037 14.36 0.00 38.71 3.08
1735 2083 6.273260 AGGATAGCATAATTGACATGGTACCT 59.727 38.462 14.36 7.19 38.71 3.08
1784 2137 4.147321 ACACAAAAACTGGATCTGCTCAT 58.853 39.130 0.00 0.00 0.00 2.90
1794 2147 3.911964 GCTTGCGTATACACAAAAACTGG 59.088 43.478 7.66 0.00 0.00 4.00
1928 2282 1.067213 TCGACGGTGAGAATTCATGCA 60.067 47.619 8.44 0.00 35.39 3.96
2050 2404 2.831526 TGGGTCTCGAACTGATGATGAA 59.168 45.455 0.00 0.00 0.00 2.57
2184 2556 4.500499 AGATTCCTCCATTTGTCCTGAG 57.500 45.455 0.00 0.00 0.00 3.35
2209 2581 2.352805 GGGACCCCACAAGCTCTG 59.647 66.667 0.00 0.00 35.81 3.35
2227 2599 3.244422 TGACCTTCGTTTTAGAGGTGCAT 60.244 43.478 0.00 0.00 32.35 3.96
2241 2613 6.578545 CACAAAACATAATGAACTGACCTTCG 59.421 38.462 0.00 0.00 0.00 3.79
2319 2692 8.531622 TTCCTGCATTAAATTAAACACATGTG 57.468 30.769 24.25 24.25 0.00 3.21
2335 2748 3.134442 TCTTTTGTGCCTTTTCCTGCATT 59.866 39.130 0.00 0.00 40.07 3.56
2481 2895 7.775120 ACTTATAAAGCCTCAACCATCATTTG 58.225 34.615 0.00 0.00 0.00 2.32
2538 2952 9.801873 ATATTTCCCAATTCAACAGAAATAACG 57.198 29.630 7.38 0.00 40.71 3.18
2543 2957 6.873076 GCACATATTTCCCAATTCAACAGAAA 59.127 34.615 0.00 0.00 0.00 2.52
2599 3031 2.762969 TACATGCACAAAGGCCGGCT 62.763 55.000 28.56 9.77 0.00 5.52
2693 3127 7.225011 AGGAGAAGGAAAACTAAGAACGAAAT 58.775 34.615 0.00 0.00 0.00 2.17
2772 3208 9.209175 GACATATAACAGGACAGATGGTAATTC 57.791 37.037 0.00 0.00 0.00 2.17
2828 3264 2.863809 ACCCACACTGGAGAAATGTTC 58.136 47.619 0.00 0.00 40.96 3.18
2839 3275 7.572523 ATTAATGTGATTGATACCCACACTG 57.427 36.000 0.00 0.00 42.65 3.66
2841 3277 8.730680 GGATATTAATGTGATTGATACCCACAC 58.269 37.037 0.00 0.00 42.65 3.82
2842 3278 8.443979 TGGATATTAATGTGATTGATACCCACA 58.556 33.333 0.00 0.00 43.77 4.17
2865 3301 5.655090 TCTTACGACCTTACATCAGAATGGA 59.345 40.000 0.00 0.00 37.19 3.41
2945 3381 1.135527 AGACCACACGTTGACGAAGAA 59.864 47.619 10.87 0.00 43.02 2.52
2956 3392 4.937696 TTTACATTGCATAGACCACACG 57.062 40.909 0.00 0.00 0.00 4.49
2997 3433 9.233649 TGAAAACAACACTTCTTACTTTTAGGA 57.766 29.630 0.00 0.00 0.00 2.94
3033 3469 9.976511 ATTGGCAGAAGAATATATTTGATTGTG 57.023 29.630 0.00 5.80 0.00 3.33
3068 3504 1.002624 CTGCCCATGTAACCCGTGT 60.003 57.895 0.00 0.00 0.00 4.49
3155 3591 5.774498 TCATGTACTCGATTCATGTAGCT 57.226 39.130 17.64 0.00 39.61 3.32
3166 3602 1.134818 GGCACCACATCATGTACTCGA 60.135 52.381 0.00 0.00 0.00 4.04
3167 3603 1.134699 AGGCACCACATCATGTACTCG 60.135 52.381 0.00 0.00 0.00 4.18
3168 3604 2.698855 AGGCACCACATCATGTACTC 57.301 50.000 0.00 0.00 0.00 2.59
3169 3605 2.677902 CGAAGGCACCACATCATGTACT 60.678 50.000 0.00 0.00 0.00 2.73
3170 3606 1.665679 CGAAGGCACCACATCATGTAC 59.334 52.381 0.00 0.00 0.00 2.90
3171 3607 1.277842 ACGAAGGCACCACATCATGTA 59.722 47.619 0.00 0.00 0.00 2.29
3172 3608 0.036732 ACGAAGGCACCACATCATGT 59.963 50.000 0.00 0.00 0.00 3.21
3173 3609 0.729116 GACGAAGGCACCACATCATG 59.271 55.000 0.00 0.00 0.00 3.07
3174 3610 0.324614 TGACGAAGGCACCACATCAT 59.675 50.000 0.00 0.00 0.00 2.45
3175 3611 0.107643 TTGACGAAGGCACCACATCA 59.892 50.000 0.00 0.00 0.00 3.07
3176 3612 1.131126 CATTGACGAAGGCACCACATC 59.869 52.381 0.00 0.00 0.00 3.06
3177 3613 1.167851 CATTGACGAAGGCACCACAT 58.832 50.000 0.00 0.00 0.00 3.21
3178 3614 0.179032 ACATTGACGAAGGCACCACA 60.179 50.000 0.00 0.00 0.00 4.17
3179 3615 0.238289 CACATTGACGAAGGCACCAC 59.762 55.000 0.00 0.00 0.00 4.16
3180 3616 0.179032 ACACATTGACGAAGGCACCA 60.179 50.000 0.00 0.00 0.00 4.17
3181 3617 0.238289 CACACATTGACGAAGGCACC 59.762 55.000 0.00 0.00 0.00 5.01
3182 3618 1.225855 TCACACATTGACGAAGGCAC 58.774 50.000 0.00 0.00 0.00 5.01
3183 3619 2.076100 GATCACACATTGACGAAGGCA 58.924 47.619 0.00 0.00 36.92 4.75
3184 3620 2.350522 AGATCACACATTGACGAAGGC 58.649 47.619 0.00 0.00 36.92 4.35
3185 3621 3.061295 CGAAGATCACACATTGACGAAGG 59.939 47.826 0.00 0.00 36.92 3.46
3186 3622 3.675225 ACGAAGATCACACATTGACGAAG 59.325 43.478 0.00 0.00 36.92 3.79
3187 3623 3.649073 ACGAAGATCACACATTGACGAA 58.351 40.909 0.00 0.00 36.92 3.85
3188 3624 3.242518 GACGAAGATCACACATTGACGA 58.757 45.455 0.00 0.00 36.92 4.20
3189 3625 2.986479 TGACGAAGATCACACATTGACG 59.014 45.455 0.00 0.00 36.92 4.35
3190 3626 4.990543 TTGACGAAGATCACACATTGAC 57.009 40.909 0.00 0.00 36.92 3.18
3191 3627 4.996758 ACATTGACGAAGATCACACATTGA 59.003 37.500 0.00 0.00 39.11 2.57
3192 3628 5.287170 ACATTGACGAAGATCACACATTG 57.713 39.130 0.00 0.00 0.00 2.82
3193 3629 6.457392 GCATACATTGACGAAGATCACACATT 60.457 38.462 0.00 0.00 0.00 2.71
3194 3630 5.007039 GCATACATTGACGAAGATCACACAT 59.993 40.000 0.00 0.00 0.00 3.21
3195 3631 4.329801 GCATACATTGACGAAGATCACACA 59.670 41.667 0.00 0.00 0.00 3.72
3196 3632 4.568359 AGCATACATTGACGAAGATCACAC 59.432 41.667 0.00 0.00 0.00 3.82
3197 3633 4.758688 AGCATACATTGACGAAGATCACA 58.241 39.130 0.00 0.00 0.00 3.58
3198 3634 5.046529 AGAGCATACATTGACGAAGATCAC 58.953 41.667 0.00 0.00 0.00 3.06
3199 3635 5.268118 AGAGCATACATTGACGAAGATCA 57.732 39.130 0.00 0.00 0.00 2.92
3200 3636 6.417327 CAAAGAGCATACATTGACGAAGATC 58.583 40.000 0.00 0.00 0.00 2.75
3201 3637 5.220739 GCAAAGAGCATACATTGACGAAGAT 60.221 40.000 0.00 0.00 44.79 2.40
3202 3638 4.093408 GCAAAGAGCATACATTGACGAAGA 59.907 41.667 0.00 0.00 44.79 2.87
3203 3639 4.337763 GCAAAGAGCATACATTGACGAAG 58.662 43.478 0.00 0.00 44.79 3.79
3204 3640 4.340894 GCAAAGAGCATACATTGACGAA 57.659 40.909 0.00 0.00 44.79 3.85
3217 3653 3.054878 CACCACTTCATTTGCAAAGAGC 58.945 45.455 18.19 0.00 45.96 4.09
3218 3654 3.054878 GCACCACTTCATTTGCAAAGAG 58.945 45.455 18.19 16.15 34.97 2.85
3219 3655 2.694628 AGCACCACTTCATTTGCAAAGA 59.305 40.909 18.19 11.88 37.44 2.52
3220 3656 3.102052 AGCACCACTTCATTTGCAAAG 57.898 42.857 18.19 6.16 37.44 2.77
3221 3657 3.636300 ACTAGCACCACTTCATTTGCAAA 59.364 39.130 15.44 15.44 37.44 3.68
3222 3658 3.221771 ACTAGCACCACTTCATTTGCAA 58.778 40.909 0.00 0.00 37.44 4.08
3223 3659 2.862541 ACTAGCACCACTTCATTTGCA 58.137 42.857 0.00 0.00 37.44 4.08
3224 3660 3.253188 TCAACTAGCACCACTTCATTTGC 59.747 43.478 0.00 0.00 35.08 3.68
3225 3661 4.611355 CGTCAACTAGCACCACTTCATTTG 60.611 45.833 0.00 0.00 0.00 2.32
3226 3662 3.498397 CGTCAACTAGCACCACTTCATTT 59.502 43.478 0.00 0.00 0.00 2.32
3227 3663 3.067106 CGTCAACTAGCACCACTTCATT 58.933 45.455 0.00 0.00 0.00 2.57
3228 3664 2.299013 TCGTCAACTAGCACCACTTCAT 59.701 45.455 0.00 0.00 0.00 2.57
3229 3665 1.684450 TCGTCAACTAGCACCACTTCA 59.316 47.619 0.00 0.00 0.00 3.02
3230 3666 2.433868 TCGTCAACTAGCACCACTTC 57.566 50.000 0.00 0.00 0.00 3.01
3231 3667 3.510360 ACTATCGTCAACTAGCACCACTT 59.490 43.478 0.00 0.00 0.00 3.16
3232 3668 3.090037 ACTATCGTCAACTAGCACCACT 58.910 45.455 0.00 0.00 0.00 4.00
3233 3669 3.436496 GACTATCGTCAACTAGCACCAC 58.564 50.000 0.00 0.00 39.98 4.16
3234 3670 2.096980 CGACTATCGTCAACTAGCACCA 59.903 50.000 0.00 0.00 40.23 4.17
3235 3671 2.541178 CCGACTATCGTCAACTAGCACC 60.541 54.545 0.00 0.00 40.23 5.01
3236 3672 2.353889 TCCGACTATCGTCAACTAGCAC 59.646 50.000 0.00 0.00 40.23 4.40
3237 3673 2.353889 GTCCGACTATCGTCAACTAGCA 59.646 50.000 0.00 0.00 40.23 3.49
3238 3674 2.599377 CGTCCGACTATCGTCAACTAGC 60.599 54.545 0.00 0.00 40.23 3.42
3239 3675 2.033065 CCGTCCGACTATCGTCAACTAG 60.033 54.545 0.00 0.00 40.23 2.57
3240 3676 1.935873 CCGTCCGACTATCGTCAACTA 59.064 52.381 0.00 0.00 40.23 2.24
3241 3677 0.731417 CCGTCCGACTATCGTCAACT 59.269 55.000 0.00 0.00 40.23 3.16
3242 3678 0.248377 CCCGTCCGACTATCGTCAAC 60.248 60.000 0.00 0.00 40.23 3.18
3243 3679 1.378882 CCCCGTCCGACTATCGTCAA 61.379 60.000 0.00 0.00 40.23 3.18
3244 3680 1.820906 CCCCGTCCGACTATCGTCA 60.821 63.158 0.00 0.00 40.23 4.35
3245 3681 2.550101 CCCCCGTCCGACTATCGTC 61.550 68.421 0.00 0.00 38.40 4.20
3246 3682 1.983119 TACCCCCGTCCGACTATCGT 61.983 60.000 0.00 0.00 38.40 3.73
3247 3683 0.819259 TTACCCCCGTCCGACTATCG 60.819 60.000 0.00 0.00 40.07 2.92
3248 3684 1.402787 TTTACCCCCGTCCGACTATC 58.597 55.000 0.00 0.00 0.00 2.08
3249 3685 2.092598 ATTTACCCCCGTCCGACTAT 57.907 50.000 0.00 0.00 0.00 2.12
3250 3686 2.586425 CTATTTACCCCCGTCCGACTA 58.414 52.381 0.00 0.00 0.00 2.59
3251 3687 1.406903 CTATTTACCCCCGTCCGACT 58.593 55.000 0.00 0.00 0.00 4.18
3252 3688 0.390492 CCTATTTACCCCCGTCCGAC 59.610 60.000 0.00 0.00 0.00 4.79
3253 3689 0.261402 TCCTATTTACCCCCGTCCGA 59.739 55.000 0.00 0.00 0.00 4.55
3254 3690 1.069668 CTTCCTATTTACCCCCGTCCG 59.930 57.143 0.00 0.00 0.00 4.79
3255 3691 2.121948 ACTTCCTATTTACCCCCGTCC 58.878 52.381 0.00 0.00 0.00 4.79
3256 3692 3.920231 AACTTCCTATTTACCCCCGTC 57.080 47.619 0.00 0.00 0.00 4.79
3257 3693 4.623863 TCTAACTTCCTATTTACCCCCGT 58.376 43.478 0.00 0.00 0.00 5.28
3258 3694 4.652881 ACTCTAACTTCCTATTTACCCCCG 59.347 45.833 0.00 0.00 0.00 5.73
3259 3695 6.572182 AACTCTAACTTCCTATTTACCCCC 57.428 41.667 0.00 0.00 0.00 5.40
3260 3696 8.155510 CCATAACTCTAACTTCCTATTTACCCC 58.844 40.741 0.00 0.00 0.00 4.95
3261 3697 8.931568 TCCATAACTCTAACTTCCTATTTACCC 58.068 37.037 0.00 0.00 0.00 3.69
3262 3698 9.984190 CTCCATAACTCTAACTTCCTATTTACC 57.016 37.037 0.00 0.00 0.00 2.85
3265 3701 9.268282 TGTCTCCATAACTCTAACTTCCTATTT 57.732 33.333 0.00 0.00 0.00 1.40
3266 3702 8.840200 TGTCTCCATAACTCTAACTTCCTATT 57.160 34.615 0.00 0.00 0.00 1.73
3267 3703 8.840200 TTGTCTCCATAACTCTAACTTCCTAT 57.160 34.615 0.00 0.00 0.00 2.57
3268 3704 8.529476 GTTTGTCTCCATAACTCTAACTTCCTA 58.471 37.037 0.00 0.00 0.00 2.94
3269 3705 7.387643 GTTTGTCTCCATAACTCTAACTTCCT 58.612 38.462 0.00 0.00 0.00 3.36
3270 3706 6.594547 GGTTTGTCTCCATAACTCTAACTTCC 59.405 42.308 0.00 0.00 0.00 3.46
3271 3707 7.387643 AGGTTTGTCTCCATAACTCTAACTTC 58.612 38.462 0.00 0.00 0.00 3.01
3272 3708 7.317722 AGGTTTGTCTCCATAACTCTAACTT 57.682 36.000 0.00 0.00 0.00 2.66
3273 3709 6.936968 AGGTTTGTCTCCATAACTCTAACT 57.063 37.500 0.00 0.00 0.00 2.24
3274 3710 6.371825 CCAAGGTTTGTCTCCATAACTCTAAC 59.628 42.308 0.00 0.00 0.00 2.34
3275 3711 6.271391 TCCAAGGTTTGTCTCCATAACTCTAA 59.729 38.462 0.00 0.00 0.00 2.10
3276 3712 5.783360 TCCAAGGTTTGTCTCCATAACTCTA 59.217 40.000 0.00 0.00 0.00 2.43
3277 3713 4.597507 TCCAAGGTTTGTCTCCATAACTCT 59.402 41.667 0.00 0.00 0.00 3.24
3278 3714 4.906618 TCCAAGGTTTGTCTCCATAACTC 58.093 43.478 0.00 0.00 0.00 3.01
3279 3715 4.993705 TCCAAGGTTTGTCTCCATAACT 57.006 40.909 0.00 0.00 0.00 2.24
3280 3716 5.163754 CGATTCCAAGGTTTGTCTCCATAAC 60.164 44.000 0.00 0.00 0.00 1.89
3281 3717 4.941263 CGATTCCAAGGTTTGTCTCCATAA 59.059 41.667 0.00 0.00 0.00 1.90
3282 3718 4.224147 TCGATTCCAAGGTTTGTCTCCATA 59.776 41.667 0.00 0.00 0.00 2.74
3283 3719 3.009033 TCGATTCCAAGGTTTGTCTCCAT 59.991 43.478 0.00 0.00 0.00 3.41
3284 3720 2.370519 TCGATTCCAAGGTTTGTCTCCA 59.629 45.455 0.00 0.00 0.00 3.86
3285 3721 3.053831 TCGATTCCAAGGTTTGTCTCC 57.946 47.619 0.00 0.00 0.00 3.71
3286 3722 4.083271 CCTTTCGATTCCAAGGTTTGTCTC 60.083 45.833 5.58 0.00 35.67 3.36
3287 3723 3.821033 CCTTTCGATTCCAAGGTTTGTCT 59.179 43.478 5.58 0.00 35.67 3.41
3288 3724 3.057526 CCCTTTCGATTCCAAGGTTTGTC 60.058 47.826 11.68 0.00 38.37 3.18
3289 3725 2.890945 CCCTTTCGATTCCAAGGTTTGT 59.109 45.455 11.68 0.00 38.37 2.83
3290 3726 2.890945 ACCCTTTCGATTCCAAGGTTTG 59.109 45.455 11.68 1.16 38.37 2.93
3291 3727 3.238788 ACCCTTTCGATTCCAAGGTTT 57.761 42.857 11.68 0.00 38.37 3.27
3292 3728 2.971901 ACCCTTTCGATTCCAAGGTT 57.028 45.000 11.68 0.00 38.37 3.50
3293 3729 2.971901 AACCCTTTCGATTCCAAGGT 57.028 45.000 11.68 0.00 38.37 3.50
3294 3730 4.440112 GCATAAACCCTTTCGATTCCAAGG 60.440 45.833 6.63 6.63 39.58 3.61
3295 3731 4.399303 AGCATAAACCCTTTCGATTCCAAG 59.601 41.667 0.00 0.00 0.00 3.61
3296 3732 4.340617 AGCATAAACCCTTTCGATTCCAA 58.659 39.130 0.00 0.00 0.00 3.53
3297 3733 3.963129 AGCATAAACCCTTTCGATTCCA 58.037 40.909 0.00 0.00 0.00 3.53
3298 3734 4.983671 AAGCATAAACCCTTTCGATTCC 57.016 40.909 0.00 0.00 0.00 3.01
3299 3735 6.679327 ACTAAGCATAAACCCTTTCGATTC 57.321 37.500 0.00 0.00 0.00 2.52
3300 3736 7.562135 TCTACTAAGCATAAACCCTTTCGATT 58.438 34.615 0.00 0.00 0.00 3.34
3301 3737 7.120923 TCTACTAAGCATAAACCCTTTCGAT 57.879 36.000 0.00 0.00 0.00 3.59
3302 3738 6.534475 TCTACTAAGCATAAACCCTTTCGA 57.466 37.500 0.00 0.00 0.00 3.71
3303 3739 6.817140 AGTTCTACTAAGCATAAACCCTTTCG 59.183 38.462 0.00 0.00 0.00 3.46
3304 3740 9.662947 TTAGTTCTACTAAGCATAAACCCTTTC 57.337 33.333 0.00 0.00 35.89 2.62
3314 3750 9.819267 GTACTGGATTTTAGTTCTACTAAGCAT 57.181 33.333 0.00 0.00 41.23 3.79
3315 3751 8.809066 TGTACTGGATTTTAGTTCTACTAAGCA 58.191 33.333 0.00 0.00 41.23 3.91
3316 3752 9.819267 ATGTACTGGATTTTAGTTCTACTAAGC 57.181 33.333 0.00 0.00 41.23 3.09
3320 3756 9.823647 CATCATGTACTGGATTTTAGTTCTACT 57.176 33.333 0.00 0.00 0.00 2.57
3321 3757 9.601217 ACATCATGTACTGGATTTTAGTTCTAC 57.399 33.333 0.00 0.00 0.00 2.59
3322 3758 9.599866 CACATCATGTACTGGATTTTAGTTCTA 57.400 33.333 0.00 0.00 0.00 2.10
3323 3759 7.066284 GCACATCATGTACTGGATTTTAGTTCT 59.934 37.037 0.00 0.00 0.00 3.01
3324 3760 7.148255 TGCACATCATGTACTGGATTTTAGTTC 60.148 37.037 0.00 0.00 0.00 3.01
3325 3761 6.658816 TGCACATCATGTACTGGATTTTAGTT 59.341 34.615 0.00 0.00 0.00 2.24
3326 3762 6.179756 TGCACATCATGTACTGGATTTTAGT 58.820 36.000 0.00 0.00 0.00 2.24
3327 3763 6.317140 ACTGCACATCATGTACTGGATTTTAG 59.683 38.462 0.00 0.00 0.00 1.85
3328 3764 6.179756 ACTGCACATCATGTACTGGATTTTA 58.820 36.000 0.00 0.00 0.00 1.52
3329 3765 5.012239 ACTGCACATCATGTACTGGATTTT 58.988 37.500 0.00 0.00 0.00 1.82
3330 3766 4.592942 ACTGCACATCATGTACTGGATTT 58.407 39.130 0.00 0.00 0.00 2.17
3331 3767 4.226427 ACTGCACATCATGTACTGGATT 57.774 40.909 0.00 0.00 0.00 3.01
3332 3768 3.920231 ACTGCACATCATGTACTGGAT 57.080 42.857 0.00 0.00 0.00 3.41
3333 3769 3.701205 AACTGCACATCATGTACTGGA 57.299 42.857 0.00 0.00 0.00 3.86
3334 3770 3.752747 TGAAACTGCACATCATGTACTGG 59.247 43.478 0.00 0.00 0.00 4.00
3335 3771 4.453478 ACTGAAACTGCACATCATGTACTG 59.547 41.667 0.00 0.00 0.00 2.74
3336 3772 4.645535 ACTGAAACTGCACATCATGTACT 58.354 39.130 0.00 0.00 0.00 2.73
3337 3773 5.639506 AGTACTGAAACTGCACATCATGTAC 59.360 40.000 0.00 14.86 33.19 2.90
3338 3774 5.793817 AGTACTGAAACTGCACATCATGTA 58.206 37.500 0.00 0.00 0.00 2.29
3339 3775 4.645535 AGTACTGAAACTGCACATCATGT 58.354 39.130 0.00 0.00 0.00 3.21
3340 3776 5.871524 ACTAGTACTGAAACTGCACATCATG 59.128 40.000 5.39 0.00 0.00 3.07
3341 3777 6.042638 ACTAGTACTGAAACTGCACATCAT 57.957 37.500 5.39 0.00 0.00 2.45
3342 3778 5.468540 ACTAGTACTGAAACTGCACATCA 57.531 39.130 5.39 0.00 0.00 3.07
3343 3779 6.037098 CCTACTAGTACTGAAACTGCACATC 58.963 44.000 5.39 0.00 0.00 3.06
3344 3780 5.480772 ACCTACTAGTACTGAAACTGCACAT 59.519 40.000 5.39 0.00 0.00 3.21
3345 3781 4.831155 ACCTACTAGTACTGAAACTGCACA 59.169 41.667 5.39 0.00 0.00 4.57
3346 3782 5.162075 CACCTACTAGTACTGAAACTGCAC 58.838 45.833 5.39 0.00 0.00 4.57
3347 3783 4.831155 ACACCTACTAGTACTGAAACTGCA 59.169 41.667 5.39 0.00 0.00 4.41
3348 3784 5.048224 TCACACCTACTAGTACTGAAACTGC 60.048 44.000 5.39 0.00 0.00 4.40
3349 3785 6.349445 CCTCACACCTACTAGTACTGAAACTG 60.349 46.154 5.39 0.00 0.00 3.16
3350 3786 5.711036 CCTCACACCTACTAGTACTGAAACT 59.289 44.000 5.39 0.00 0.00 2.66
3351 3787 5.709164 TCCTCACACCTACTAGTACTGAAAC 59.291 44.000 5.39 0.00 0.00 2.78
3352 3788 5.884322 TCCTCACACCTACTAGTACTGAAA 58.116 41.667 5.39 0.00 0.00 2.69
3353 3789 5.498393 CTCCTCACACCTACTAGTACTGAA 58.502 45.833 5.39 0.00 0.00 3.02
3354 3790 4.080469 CCTCCTCACACCTACTAGTACTGA 60.080 50.000 5.39 0.00 0.00 3.41
3355 3791 4.080469 TCCTCCTCACACCTACTAGTACTG 60.080 50.000 5.39 0.10 0.00 2.74
3356 3792 4.110072 TCCTCCTCACACCTACTAGTACT 58.890 47.826 0.00 0.00 0.00 2.73
3357 3793 4.453751 CTCCTCCTCACACCTACTAGTAC 58.546 52.174 0.00 0.00 0.00 2.73
3358 3794 3.458857 CCTCCTCCTCACACCTACTAGTA 59.541 52.174 1.89 1.89 0.00 1.82
3359 3795 2.242708 CCTCCTCCTCACACCTACTAGT 59.757 54.545 0.00 0.00 0.00 2.57
3360 3796 2.510382 TCCTCCTCCTCACACCTACTAG 59.490 54.545 0.00 0.00 0.00 2.57
3361 3797 2.510382 CTCCTCCTCCTCACACCTACTA 59.490 54.545 0.00 0.00 0.00 1.82
3362 3798 1.286553 CTCCTCCTCCTCACACCTACT 59.713 57.143 0.00 0.00 0.00 2.57
3363 3799 1.686741 CCTCCTCCTCCTCACACCTAC 60.687 61.905 0.00 0.00 0.00 3.18
3364 3800 0.631753 CCTCCTCCTCCTCACACCTA 59.368 60.000 0.00 0.00 0.00 3.08
3365 3801 1.390125 CCTCCTCCTCCTCACACCT 59.610 63.158 0.00 0.00 0.00 4.00
3366 3802 0.545548 AACCTCCTCCTCCTCACACC 60.546 60.000 0.00 0.00 0.00 4.16
3367 3803 2.104170 CTAACCTCCTCCTCCTCACAC 58.896 57.143 0.00 0.00 0.00 3.82
3368 3804 1.619977 GCTAACCTCCTCCTCCTCACA 60.620 57.143 0.00 0.00 0.00 3.58
3369 3805 1.116308 GCTAACCTCCTCCTCCTCAC 58.884 60.000 0.00 0.00 0.00 3.51
3370 3806 0.032017 GGCTAACCTCCTCCTCCTCA 60.032 60.000 0.00 0.00 0.00 3.86
3371 3807 0.263468 AGGCTAACCTCCTCCTCCTC 59.737 60.000 0.00 0.00 46.34 3.71
3372 3808 2.427016 AGGCTAACCTCCTCCTCCT 58.573 57.895 0.00 0.00 46.34 3.69
3380 3816 6.671049 GGTACCACCTTCAAGGCTAACCTC 62.671 54.167 7.15 0.00 39.65 3.85
3381 3817 4.899641 GGTACCACCTTCAAGGCTAACCT 61.900 52.174 7.15 0.00 41.47 3.50
3382 3818 2.617276 GGTACCACCTTCAAGGCTAACC 60.617 54.545 7.15 2.63 39.63 2.85
3383 3819 2.708051 GGTACCACCTTCAAGGCTAAC 58.292 52.381 7.15 0.00 39.63 2.34
3395 3831 1.275573 GTGTCCTTCTGAGGTACCACC 59.724 57.143 15.94 6.00 43.97 4.61
3396 3832 1.275573 GGTGTCCTTCTGAGGTACCAC 59.724 57.143 15.94 8.81 44.05 4.16
3397 3833 1.149288 AGGTGTCCTTCTGAGGTACCA 59.851 52.381 15.94 0.00 45.54 3.25
3398 3834 1.939980 AGGTGTCCTTCTGAGGTACC 58.060 55.000 2.73 2.73 44.51 3.34
3399 3835 4.065789 CAAAAGGTGTCCTTCTGAGGTAC 58.934 47.826 1.36 0.00 43.92 3.34
3400 3836 3.971305 TCAAAAGGTGTCCTTCTGAGGTA 59.029 43.478 1.02 0.00 43.92 3.08
3401 3837 2.777692 TCAAAAGGTGTCCTTCTGAGGT 59.222 45.455 1.02 0.00 43.92 3.85
3402 3838 3.492102 TCAAAAGGTGTCCTTCTGAGG 57.508 47.619 1.02 0.00 43.92 3.86
3403 3839 7.693969 AAATATCAAAAGGTGTCCTTCTGAG 57.306 36.000 9.82 0.00 42.83 3.35
3404 3840 7.829211 CCTAAATATCAAAAGGTGTCCTTCTGA 59.171 37.037 6.96 6.96 43.57 3.27
3405 3841 7.067494 CCCTAAATATCAAAAGGTGTCCTTCTG 59.933 40.741 1.36 0.00 43.92 3.02
3406 3842 7.119387 CCCTAAATATCAAAAGGTGTCCTTCT 58.881 38.462 1.36 0.00 43.92 2.85
3407 3843 6.890268 ACCCTAAATATCAAAAGGTGTCCTTC 59.110 38.462 1.36 0.00 43.92 3.46
3409 3845 6.011981 TGACCCTAAATATCAAAAGGTGTCCT 60.012 38.462 0.00 0.00 32.66 3.85
3410 3846 6.184789 TGACCCTAAATATCAAAAGGTGTCC 58.815 40.000 0.00 0.00 32.66 4.02
3411 3847 7.696992 TTGACCCTAAATATCAAAAGGTGTC 57.303 36.000 0.00 0.00 33.49 3.67
3412 3848 7.363793 GCATTGACCCTAAATATCAAAAGGTGT 60.364 37.037 0.00 0.00 36.03 4.16
3413 3849 6.980397 GCATTGACCCTAAATATCAAAAGGTG 59.020 38.462 0.00 0.00 36.03 4.00
3414 3850 6.897413 AGCATTGACCCTAAATATCAAAAGGT 59.103 34.615 0.00 0.00 36.03 3.50
3415 3851 7.352079 AGCATTGACCCTAAATATCAAAAGG 57.648 36.000 0.00 0.00 36.03 3.11
3416 3852 8.902806 TGTAGCATTGACCCTAAATATCAAAAG 58.097 33.333 0.00 0.00 36.03 2.27
3417 3853 8.815565 TGTAGCATTGACCCTAAATATCAAAA 57.184 30.769 0.00 0.00 36.03 2.44
3418 3854 7.502226 CCTGTAGCATTGACCCTAAATATCAAA 59.498 37.037 0.00 0.00 36.03 2.69
3419 3855 6.998074 CCTGTAGCATTGACCCTAAATATCAA 59.002 38.462 0.00 0.00 36.81 2.57
3420 3856 6.328934 TCCTGTAGCATTGACCCTAAATATCA 59.671 38.462 0.00 0.00 0.00 2.15
3421 3857 6.769512 TCCTGTAGCATTGACCCTAAATATC 58.230 40.000 0.00 0.00 0.00 1.63
3422 3858 6.240002 CCTCCTGTAGCATTGACCCTAAATAT 60.240 42.308 0.00 0.00 0.00 1.28
3423 3859 5.071788 CCTCCTGTAGCATTGACCCTAAATA 59.928 44.000 0.00 0.00 0.00 1.40
3424 3860 4.141390 CCTCCTGTAGCATTGACCCTAAAT 60.141 45.833 0.00 0.00 0.00 1.40
3425 3861 3.199946 CCTCCTGTAGCATTGACCCTAAA 59.800 47.826 0.00 0.00 0.00 1.85
3426 3862 2.771943 CCTCCTGTAGCATTGACCCTAA 59.228 50.000 0.00 0.00 0.00 2.69
3427 3863 2.023404 TCCTCCTGTAGCATTGACCCTA 60.023 50.000 0.00 0.00 0.00 3.53
3428 3864 1.207791 CCTCCTGTAGCATTGACCCT 58.792 55.000 0.00 0.00 0.00 4.34
3429 3865 1.204146 TCCTCCTGTAGCATTGACCC 58.796 55.000 0.00 0.00 0.00 4.46
3430 3866 2.486191 CCATCCTCCTGTAGCATTGACC 60.486 54.545 0.00 0.00 0.00 4.02
3431 3867 2.486191 CCCATCCTCCTGTAGCATTGAC 60.486 54.545 0.00 0.00 0.00 3.18
3432 3868 1.770658 CCCATCCTCCTGTAGCATTGA 59.229 52.381 0.00 0.00 0.00 2.57
3433 3869 1.202855 CCCCATCCTCCTGTAGCATTG 60.203 57.143 0.00 0.00 0.00 2.82
3434 3870 1.143813 CCCCATCCTCCTGTAGCATT 58.856 55.000 0.00 0.00 0.00 3.56
3435 3871 0.769776 CCCCCATCCTCCTGTAGCAT 60.770 60.000 0.00 0.00 0.00 3.79
3436 3872 1.384502 CCCCCATCCTCCTGTAGCA 60.385 63.158 0.00 0.00 0.00 3.49
3437 3873 0.105142 TACCCCCATCCTCCTGTAGC 60.105 60.000 0.00 0.00 0.00 3.58
3438 3874 2.639839 CAATACCCCCATCCTCCTGTAG 59.360 54.545 0.00 0.00 0.00 2.74
3439 3875 2.251605 TCAATACCCCCATCCTCCTGTA 59.748 50.000 0.00 0.00 0.00 2.74
3440 3876 1.010793 TCAATACCCCCATCCTCCTGT 59.989 52.381 0.00 0.00 0.00 4.00
3441 3877 1.819753 TCAATACCCCCATCCTCCTG 58.180 55.000 0.00 0.00 0.00 3.86
3442 3878 2.843909 ATCAATACCCCCATCCTCCT 57.156 50.000 0.00 0.00 0.00 3.69
3443 3879 4.105697 TGTTTATCAATACCCCCATCCTCC 59.894 45.833 0.00 0.00 0.00 4.30
3444 3880 5.319043 TGTTTATCAATACCCCCATCCTC 57.681 43.478 0.00 0.00 0.00 3.71
3445 3881 5.136048 ACATGTTTATCAATACCCCCATCCT 59.864 40.000 0.00 0.00 0.00 3.24
3446 3882 5.243730 CACATGTTTATCAATACCCCCATCC 59.756 44.000 0.00 0.00 0.00 3.51
3447 3883 6.331369 CACATGTTTATCAATACCCCCATC 57.669 41.667 0.00 0.00 0.00 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.