Multiple sequence alignment - TraesCS7B01G298600

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G298600 chr7B 100.000 3054 0 0 1 3054 535613302 535616355 0.000000e+00 5640.0
1 TraesCS7B01G298600 chr7B 89.650 1826 110 40 406 2173 535505404 535507208 0.000000e+00 2252.0
2 TraesCS7B01G298600 chr7B 86.247 1985 143 67 376 2286 535517424 535519352 0.000000e+00 2034.0
3 TraesCS7B01G298600 chr7B 90.523 306 29 0 1 306 742086020 742085715 3.670000e-109 405.0
4 TraesCS7B01G298600 chr7B 88.197 305 36 0 2 306 127888257 127887953 6.220000e-97 364.0
5 TraesCS7B01G298600 chr7B 87.960 299 35 1 8 306 127686335 127686038 4.840000e-93 351.0
6 TraesCS7B01G298600 chr7B 100.000 62 0 0 2993 3054 623791669 623791608 6.920000e-22 115.0
7 TraesCS7B01G298600 chr7B 95.122 41 2 0 302 342 74601136 74601176 7.070000e-07 65.8
8 TraesCS7B01G298600 chr7D 89.163 1947 116 44 376 2268 506881950 506883855 0.000000e+00 2338.0
9 TraesCS7B01G298600 chr7D 89.011 91 5 5 2965 3054 454824866 454824780 1.160000e-19 108.0
10 TraesCS7B01G298600 chr7A 88.112 1960 125 43 376 2275 574753161 574755072 0.000000e+00 2230.0
11 TraesCS7B01G298600 chr7A 90.395 1645 83 31 691 2291 574971097 574972710 0.000000e+00 2093.0
12 TraesCS7B01G298600 chr7A 97.619 42 1 0 304 345 353458275 353458234 4.220000e-09 73.1
13 TraesCS7B01G298600 chr1D 89.700 1000 99 3 1063 2058 401775016 401774017 0.000000e+00 1273.0
14 TraesCS7B01G298600 chr1D 89.888 979 99 0 1074 2052 401921284 401920306 0.000000e+00 1260.0
15 TraesCS7B01G298600 chr1D 89.888 979 99 0 1074 2052 402006502 402005524 0.000000e+00 1260.0
16 TraesCS7B01G298600 chr1D 89.785 979 100 0 1074 2052 402108064 402107086 0.000000e+00 1254.0
17 TraesCS7B01G298600 chr1D 97.500 40 1 0 307 346 476766246 476766207 5.460000e-08 69.4
18 TraesCS7B01G298600 chr6A 87.023 655 63 3 2353 2991 437728208 437727560 0.000000e+00 719.0
19 TraesCS7B01G298600 chr6A 85.912 433 45 2 2575 2991 269502951 269502519 6.010000e-122 448.0
20 TraesCS7B01G298600 chr6A 89.381 226 17 1 2353 2578 269577725 269577507 8.340000e-71 278.0
21 TraesCS7B01G298600 chr6D 86.718 655 59 5 2353 2991 209034030 209033388 0.000000e+00 702.0
22 TraesCS7B01G298600 chr6D 87.248 298 36 1 9 306 42127318 42127023 3.770000e-89 339.0
23 TraesCS7B01G298600 chr5B 89.869 306 31 0 1 306 655164981 655165286 7.940000e-106 394.0
24 TraesCS7B01G298600 chr5B 97.222 72 0 2 2983 3054 138645877 138645808 1.490000e-23 121.0
25 TraesCS7B01G298600 chr5B 95.946 74 2 1 2981 3054 563101883 563101955 5.350000e-23 119.0
26 TraesCS7B01G298600 chr3B 89.216 306 33 0 1 306 52191709 52191404 1.720000e-102 383.0
27 TraesCS7B01G298600 chrUn 87.255 306 20 7 1 306 277494428 277494714 6.310000e-87 331.0
28 TraesCS7B01G298600 chr5A 87.255 306 20 7 1 306 695394410 695394124 6.310000e-87 331.0
29 TraesCS7B01G298600 chr5A 87.255 306 20 7 1 306 695419779 695419493 6.310000e-87 331.0
30 TraesCS7B01G298600 chr5A 97.222 72 1 1 2983 3054 623035760 623035830 1.490000e-23 121.0
31 TraesCS7B01G298600 chr1B 86.111 216 24 1 2354 2569 197162666 197162875 8.520000e-56 228.0
32 TraesCS7B01G298600 chr1B 98.571 70 0 1 2985 3054 511471780 511471712 4.140000e-24 122.0
33 TraesCS7B01G298600 chr2B 96.000 75 1 2 2981 3054 564338714 564338641 1.490000e-23 121.0
34 TraesCS7B01G298600 chr6B 94.805 77 2 2 2978 3054 487274383 487274457 5.350000e-23 119.0
35 TraesCS7B01G298600 chr6B 95.556 45 1 1 302 346 569932342 569932299 1.520000e-08 71.3
36 TraesCS7B01G298600 chr4B 94.805 77 2 2 2978 3054 469164972 469165046 5.350000e-23 119.0
37 TraesCS7B01G298600 chr2D 95.455 44 2 0 302 345 580233470 580233427 1.520000e-08 71.3
38 TraesCS7B01G298600 chr2D 95.238 42 2 0 304 345 296251867 296251826 1.970000e-07 67.6
39 TraesCS7B01G298600 chr2D 100.000 28 0 0 2846 2873 501282150 501282177 6.000000e-03 52.8
40 TraesCS7B01G298600 chr1A 97.561 41 1 0 302 342 474284651 474284691 1.520000e-08 71.3
41 TraesCS7B01G298600 chr1A 97.561 41 1 0 302 342 554054432 554054392 1.520000e-08 71.3
42 TraesCS7B01G298600 chr4D 95.122 41 2 0 302 342 190579130 190579170 7.070000e-07 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G298600 chr7B 535613302 535616355 3053 False 5640 5640 100.000 1 3054 1 chr7B.!!$F4 3053
1 TraesCS7B01G298600 chr7B 535505404 535507208 1804 False 2252 2252 89.650 406 2173 1 chr7B.!!$F2 1767
2 TraesCS7B01G298600 chr7B 535517424 535519352 1928 False 2034 2034 86.247 376 2286 1 chr7B.!!$F3 1910
3 TraesCS7B01G298600 chr7D 506881950 506883855 1905 False 2338 2338 89.163 376 2268 1 chr7D.!!$F1 1892
4 TraesCS7B01G298600 chr7A 574753161 574755072 1911 False 2230 2230 88.112 376 2275 1 chr7A.!!$F1 1899
5 TraesCS7B01G298600 chr7A 574971097 574972710 1613 False 2093 2093 90.395 691 2291 1 chr7A.!!$F2 1600
6 TraesCS7B01G298600 chr1D 401774017 401775016 999 True 1273 1273 89.700 1063 2058 1 chr1D.!!$R1 995
7 TraesCS7B01G298600 chr1D 401920306 401921284 978 True 1260 1260 89.888 1074 2052 1 chr1D.!!$R2 978
8 TraesCS7B01G298600 chr1D 402005524 402006502 978 True 1260 1260 89.888 1074 2052 1 chr1D.!!$R3 978
9 TraesCS7B01G298600 chr1D 402107086 402108064 978 True 1254 1254 89.785 1074 2052 1 chr1D.!!$R4 978
10 TraesCS7B01G298600 chr6A 437727560 437728208 648 True 719 719 87.023 2353 2991 1 chr6A.!!$R3 638
11 TraesCS7B01G298600 chr6D 209033388 209034030 642 True 702 702 86.718 2353 2991 1 chr6D.!!$R2 638

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
304 305 0.033504 TGTGCTTGTCCTCGACTTCC 59.966 55.0 0.0 0.0 33.15 3.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2303 2492 0.39034 TCTCGCTGATGGTGTCTTGC 60.39 55.0 0.0 0.0 0.0 4.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.555348 CCTCGCGAAGTCTAGATTTAGT 57.445 45.455 11.33 0.00 0.00 2.24
22 23 4.529446 CCTCGCGAAGTCTAGATTTAGTC 58.471 47.826 11.33 2.60 0.00 2.59
23 24 4.273969 CCTCGCGAAGTCTAGATTTAGTCT 59.726 45.833 11.33 0.00 41.11 3.24
24 25 5.406767 TCGCGAAGTCTAGATTTAGTCTC 57.593 43.478 6.20 0.00 38.42 3.36
25 26 5.117584 TCGCGAAGTCTAGATTTAGTCTCT 58.882 41.667 6.20 0.00 38.42 3.10
26 27 5.234757 TCGCGAAGTCTAGATTTAGTCTCTC 59.765 44.000 6.20 0.00 38.42 3.20
27 28 5.006844 CGCGAAGTCTAGATTTAGTCTCTCA 59.993 44.000 0.00 0.00 38.42 3.27
28 29 6.457122 CGCGAAGTCTAGATTTAGTCTCTCAA 60.457 42.308 0.00 0.00 38.42 3.02
29 30 6.689669 GCGAAGTCTAGATTTAGTCTCTCAAC 59.310 42.308 9.29 0.00 38.42 3.18
30 31 7.414762 GCGAAGTCTAGATTTAGTCTCTCAACT 60.415 40.741 9.29 0.00 38.42 3.16
31 32 8.120465 CGAAGTCTAGATTTAGTCTCTCAACTC 58.880 40.741 0.00 0.00 38.42 3.01
32 33 7.875327 AGTCTAGATTTAGTCTCTCAACTCC 57.125 40.000 0.00 0.00 38.42 3.85
33 34 7.406916 AGTCTAGATTTAGTCTCTCAACTCCA 58.593 38.462 0.00 0.00 38.42 3.86
34 35 7.891183 AGTCTAGATTTAGTCTCTCAACTCCAA 59.109 37.037 0.00 0.00 38.42 3.53
35 36 8.524487 GTCTAGATTTAGTCTCTCAACTCCAAA 58.476 37.037 0.00 0.00 38.42 3.28
36 37 9.090103 TCTAGATTTAGTCTCTCAACTCCAAAA 57.910 33.333 0.00 0.00 38.42 2.44
37 38 7.971183 AGATTTAGTCTCTCAACTCCAAAAC 57.029 36.000 0.00 0.00 28.45 2.43
38 39 6.937465 AGATTTAGTCTCTCAACTCCAAAACC 59.063 38.462 0.00 0.00 28.45 3.27
39 40 3.113260 AGTCTCTCAACTCCAAAACCG 57.887 47.619 0.00 0.00 0.00 4.44
40 41 2.143925 GTCTCTCAACTCCAAAACCGG 58.856 52.381 0.00 0.00 0.00 5.28
41 42 2.043992 TCTCTCAACTCCAAAACCGGA 58.956 47.619 9.46 0.00 0.00 5.14
42 43 2.143925 CTCTCAACTCCAAAACCGGAC 58.856 52.381 9.46 0.00 0.00 4.79
43 44 1.487142 TCTCAACTCCAAAACCGGACA 59.513 47.619 9.46 0.00 0.00 4.02
44 45 2.092861 TCTCAACTCCAAAACCGGACAA 60.093 45.455 9.46 0.00 0.00 3.18
45 46 2.018515 TCAACTCCAAAACCGGACAAC 58.981 47.619 9.46 0.00 0.00 3.32
46 47 2.021457 CAACTCCAAAACCGGACAACT 58.979 47.619 9.46 0.00 0.00 3.16
47 48 2.425668 CAACTCCAAAACCGGACAACTT 59.574 45.455 9.46 0.00 0.00 2.66
48 49 3.564053 ACTCCAAAACCGGACAACTTA 57.436 42.857 9.46 0.00 0.00 2.24
49 50 3.208594 ACTCCAAAACCGGACAACTTAC 58.791 45.455 9.46 0.00 0.00 2.34
50 51 3.207778 CTCCAAAACCGGACAACTTACA 58.792 45.455 9.46 0.00 0.00 2.41
51 52 2.944349 TCCAAAACCGGACAACTTACAC 59.056 45.455 9.46 0.00 0.00 2.90
52 53 2.033675 CCAAAACCGGACAACTTACACC 59.966 50.000 9.46 0.00 0.00 4.16
53 54 1.971481 AAACCGGACAACTTACACCC 58.029 50.000 9.46 0.00 0.00 4.61
54 55 0.109153 AACCGGACAACTTACACCCC 59.891 55.000 9.46 0.00 0.00 4.95
55 56 1.055551 ACCGGACAACTTACACCCCA 61.056 55.000 9.46 0.00 0.00 4.96
56 57 0.108963 CCGGACAACTTACACCCCAA 59.891 55.000 0.00 0.00 0.00 4.12
57 58 1.477195 CCGGACAACTTACACCCCAAA 60.477 52.381 0.00 0.00 0.00 3.28
58 59 1.605232 CGGACAACTTACACCCCAAAC 59.395 52.381 0.00 0.00 0.00 2.93
59 60 2.747135 CGGACAACTTACACCCCAAACT 60.747 50.000 0.00 0.00 0.00 2.66
60 61 2.882761 GGACAACTTACACCCCAAACTC 59.117 50.000 0.00 0.00 0.00 3.01
61 62 3.434596 GGACAACTTACACCCCAAACTCT 60.435 47.826 0.00 0.00 0.00 3.24
62 63 4.204799 GACAACTTACACCCCAAACTCTT 58.795 43.478 0.00 0.00 0.00 2.85
63 64 3.951680 ACAACTTACACCCCAAACTCTTG 59.048 43.478 0.00 0.00 0.00 3.02
64 65 4.204012 CAACTTACACCCCAAACTCTTGA 58.796 43.478 0.00 0.00 34.14 3.02
65 66 4.513406 ACTTACACCCCAAACTCTTGAA 57.487 40.909 0.00 0.00 34.14 2.69
66 67 4.862371 ACTTACACCCCAAACTCTTGAAA 58.138 39.130 0.00 0.00 34.14 2.69
67 68 4.643334 ACTTACACCCCAAACTCTTGAAAC 59.357 41.667 0.00 0.00 34.14 2.78
68 69 2.384828 ACACCCCAAACTCTTGAAACC 58.615 47.619 0.00 0.00 34.14 3.27
69 70 1.336755 CACCCCAAACTCTTGAAACCG 59.663 52.381 0.00 0.00 34.14 4.44
70 71 0.958822 CCCCAAACTCTTGAAACCGG 59.041 55.000 0.00 0.00 34.14 5.28
71 72 1.477923 CCCCAAACTCTTGAAACCGGA 60.478 52.381 9.46 0.00 34.14 5.14
72 73 1.607148 CCCAAACTCTTGAAACCGGAC 59.393 52.381 9.46 0.00 34.14 4.79
73 74 2.294074 CCAAACTCTTGAAACCGGACA 58.706 47.619 9.46 2.00 34.14 4.02
74 75 2.685897 CCAAACTCTTGAAACCGGACAA 59.314 45.455 9.46 10.76 34.14 3.18
75 76 3.129638 CCAAACTCTTGAAACCGGACAAA 59.870 43.478 9.46 0.00 34.14 2.83
76 77 4.202111 CCAAACTCTTGAAACCGGACAAAT 60.202 41.667 9.46 0.00 34.14 2.32
77 78 5.348164 CAAACTCTTGAAACCGGACAAATT 58.652 37.500 9.46 4.05 34.14 1.82
78 79 5.592104 AACTCTTGAAACCGGACAAATTT 57.408 34.783 9.46 0.00 0.00 1.82
79 80 6.702716 AACTCTTGAAACCGGACAAATTTA 57.297 33.333 9.46 0.00 0.00 1.40
80 81 6.313744 ACTCTTGAAACCGGACAAATTTAG 57.686 37.500 9.46 8.87 0.00 1.85
81 82 5.826208 ACTCTTGAAACCGGACAAATTTAGT 59.174 36.000 9.46 9.41 0.00 2.24
82 83 6.017357 ACTCTTGAAACCGGACAAATTTAGTC 60.017 38.462 9.46 10.50 35.29 2.59
93 94 5.046910 ACAAATTTAGTCCATTGTCTGCG 57.953 39.130 0.00 0.00 30.58 5.18
94 95 3.764885 AATTTAGTCCATTGTCTGCGC 57.235 42.857 0.00 0.00 0.00 6.09
95 96 2.177394 TTTAGTCCATTGTCTGCGCA 57.823 45.000 10.98 10.98 0.00 6.09
96 97 2.177394 TTAGTCCATTGTCTGCGCAA 57.823 45.000 13.05 0.00 0.00 4.85
97 98 2.177394 TAGTCCATTGTCTGCGCAAA 57.823 45.000 13.05 2.84 31.63 3.68
98 99 0.593128 AGTCCATTGTCTGCGCAAAC 59.407 50.000 13.05 9.93 31.63 2.93
99 100 0.387239 GTCCATTGTCTGCGCAAACC 60.387 55.000 12.08 2.37 31.63 3.27
100 101 1.080569 CCATTGTCTGCGCAAACCC 60.081 57.895 12.08 0.00 31.63 4.11
101 102 1.659233 CATTGTCTGCGCAAACCCA 59.341 52.632 12.08 2.56 31.63 4.51
102 103 0.387622 CATTGTCTGCGCAAACCCAG 60.388 55.000 12.08 0.00 31.63 4.45
103 104 2.146073 ATTGTCTGCGCAAACCCAGC 62.146 55.000 12.08 0.00 31.63 4.85
104 105 3.286751 GTCTGCGCAAACCCAGCA 61.287 61.111 13.05 0.00 39.25 4.41
105 106 2.282391 TCTGCGCAAACCCAGCAT 60.282 55.556 13.05 0.00 40.35 3.79
106 107 2.180017 CTGCGCAAACCCAGCATC 59.820 61.111 13.05 0.00 40.35 3.91
107 108 3.672255 CTGCGCAAACCCAGCATCG 62.672 63.158 13.05 0.00 40.35 3.84
109 110 3.434319 CGCAAACCCAGCATCGCT 61.434 61.111 0.00 0.00 40.77 4.93
135 136 7.325660 CTGACTTAGCATGGTTTTGATATGT 57.674 36.000 1.12 0.00 31.13 2.29
136 137 7.320443 TGACTTAGCATGGTTTTGATATGTC 57.680 36.000 1.12 2.68 40.36 3.06
137 138 7.112122 TGACTTAGCATGGTTTTGATATGTCT 58.888 34.615 1.12 0.00 40.48 3.41
138 139 7.611467 TGACTTAGCATGGTTTTGATATGTCTT 59.389 33.333 1.12 0.00 40.48 3.01
139 140 8.353423 ACTTAGCATGGTTTTGATATGTCTTT 57.647 30.769 1.12 0.00 0.00 2.52
140 141 8.246180 ACTTAGCATGGTTTTGATATGTCTTTG 58.754 33.333 1.12 0.00 0.00 2.77
141 142 6.594788 AGCATGGTTTTGATATGTCTTTGT 57.405 33.333 0.00 0.00 0.00 2.83
142 143 6.624423 AGCATGGTTTTGATATGTCTTTGTC 58.376 36.000 0.00 0.00 0.00 3.18
143 144 5.807011 GCATGGTTTTGATATGTCTTTGTCC 59.193 40.000 0.00 0.00 0.00 4.02
144 145 6.572119 GCATGGTTTTGATATGTCTTTGTCCA 60.572 38.462 0.00 0.00 0.00 4.02
145 146 7.549839 CATGGTTTTGATATGTCTTTGTCCAT 58.450 34.615 0.00 0.00 0.00 3.41
146 147 6.923012 TGGTTTTGATATGTCTTTGTCCATG 58.077 36.000 0.00 0.00 0.00 3.66
147 148 6.493115 TGGTTTTGATATGTCTTTGTCCATGT 59.507 34.615 0.00 0.00 0.00 3.21
148 149 6.808212 GGTTTTGATATGTCTTTGTCCATGTG 59.192 38.462 0.00 0.00 0.00 3.21
149 150 6.513806 TTTGATATGTCTTTGTCCATGTGG 57.486 37.500 0.00 0.00 0.00 4.17
150 151 3.947196 TGATATGTCTTTGTCCATGTGGC 59.053 43.478 0.00 0.00 34.44 5.01
151 152 2.291209 ATGTCTTTGTCCATGTGGCA 57.709 45.000 0.00 0.00 34.44 4.92
152 153 1.608055 TGTCTTTGTCCATGTGGCAG 58.392 50.000 0.00 0.00 34.44 4.85
153 154 1.133823 TGTCTTTGTCCATGTGGCAGT 60.134 47.619 0.00 0.00 34.44 4.40
154 155 2.105649 TGTCTTTGTCCATGTGGCAGTA 59.894 45.455 0.00 0.00 34.44 2.74
155 156 3.244875 TGTCTTTGTCCATGTGGCAGTAT 60.245 43.478 0.00 0.00 34.44 2.12
156 157 3.758554 GTCTTTGTCCATGTGGCAGTATT 59.241 43.478 0.00 0.00 34.44 1.89
157 158 4.218417 GTCTTTGTCCATGTGGCAGTATTT 59.782 41.667 0.00 0.00 34.44 1.40
158 159 4.458989 TCTTTGTCCATGTGGCAGTATTTC 59.541 41.667 0.00 0.00 34.44 2.17
159 160 3.719268 TGTCCATGTGGCAGTATTTCT 57.281 42.857 0.00 0.00 34.44 2.52
160 161 3.609853 TGTCCATGTGGCAGTATTTCTC 58.390 45.455 0.00 0.00 34.44 2.87
161 162 3.264193 TGTCCATGTGGCAGTATTTCTCT 59.736 43.478 0.00 0.00 34.44 3.10
162 163 3.873952 GTCCATGTGGCAGTATTTCTCTC 59.126 47.826 0.00 0.00 34.44 3.20
163 164 3.776969 TCCATGTGGCAGTATTTCTCTCT 59.223 43.478 0.00 0.00 34.44 3.10
164 165 4.125703 CCATGTGGCAGTATTTCTCTCTC 58.874 47.826 0.00 0.00 0.00 3.20
165 166 3.895232 TGTGGCAGTATTTCTCTCTCC 57.105 47.619 0.00 0.00 0.00 3.71
166 167 3.445008 TGTGGCAGTATTTCTCTCTCCT 58.555 45.455 0.00 0.00 0.00 3.69
167 168 4.610333 TGTGGCAGTATTTCTCTCTCCTA 58.390 43.478 0.00 0.00 0.00 2.94
168 169 5.211973 TGTGGCAGTATTTCTCTCTCCTAT 58.788 41.667 0.00 0.00 0.00 2.57
169 170 5.303078 TGTGGCAGTATTTCTCTCTCCTATC 59.697 44.000 0.00 0.00 0.00 2.08
170 171 5.538433 GTGGCAGTATTTCTCTCTCCTATCT 59.462 44.000 0.00 0.00 0.00 1.98
171 172 6.041523 GTGGCAGTATTTCTCTCTCCTATCTT 59.958 42.308 0.00 0.00 0.00 2.40
172 173 6.266558 TGGCAGTATTTCTCTCTCCTATCTTC 59.733 42.308 0.00 0.00 0.00 2.87
173 174 6.493458 GGCAGTATTTCTCTCTCCTATCTTCT 59.507 42.308 0.00 0.00 0.00 2.85
174 175 7.015195 GGCAGTATTTCTCTCTCCTATCTTCTT 59.985 40.741 0.00 0.00 0.00 2.52
175 176 8.082242 GCAGTATTTCTCTCTCCTATCTTCTTC 58.918 40.741 0.00 0.00 0.00 2.87
176 177 8.576442 CAGTATTTCTCTCTCCTATCTTCTTCC 58.424 40.741 0.00 0.00 0.00 3.46
177 178 8.511126 AGTATTTCTCTCTCCTATCTTCTTCCT 58.489 37.037 0.00 0.00 0.00 3.36
178 179 9.143155 GTATTTCTCTCTCCTATCTTCTTCCTT 57.857 37.037 0.00 0.00 0.00 3.36
179 180 7.654022 TTTCTCTCTCCTATCTTCTTCCTTC 57.346 40.000 0.00 0.00 0.00 3.46
180 181 6.590656 TCTCTCTCCTATCTTCTTCCTTCT 57.409 41.667 0.00 0.00 0.00 2.85
181 182 6.601332 TCTCTCTCCTATCTTCTTCCTTCTC 58.399 44.000 0.00 0.00 0.00 2.87
182 183 6.159575 TCTCTCTCCTATCTTCTTCCTTCTCA 59.840 42.308 0.00 0.00 0.00 3.27
183 184 6.921412 TCTCTCCTATCTTCTTCCTTCTCAT 58.079 40.000 0.00 0.00 0.00 2.90
184 185 8.051468 TCTCTCCTATCTTCTTCCTTCTCATA 57.949 38.462 0.00 0.00 0.00 2.15
185 186 8.677871 TCTCTCCTATCTTCTTCCTTCTCATAT 58.322 37.037 0.00 0.00 0.00 1.78
186 187 9.312904 CTCTCCTATCTTCTTCCTTCTCATATT 57.687 37.037 0.00 0.00 0.00 1.28
187 188 9.087871 TCTCCTATCTTCTTCCTTCTCATATTG 57.912 37.037 0.00 0.00 0.00 1.90
188 189 8.200024 TCCTATCTTCTTCCTTCTCATATTGG 57.800 38.462 0.00 0.00 0.00 3.16
189 190 6.878389 CCTATCTTCTTCCTTCTCATATTGGC 59.122 42.308 0.00 0.00 0.00 4.52
190 191 5.965033 TCTTCTTCCTTCTCATATTGGCT 57.035 39.130 0.00 0.00 0.00 4.75
191 192 6.319048 TCTTCTTCCTTCTCATATTGGCTT 57.681 37.500 0.00 0.00 0.00 4.35
192 193 7.437713 TCTTCTTCCTTCTCATATTGGCTTA 57.562 36.000 0.00 0.00 0.00 3.09
193 194 8.038862 TCTTCTTCCTTCTCATATTGGCTTAT 57.961 34.615 0.00 0.00 0.00 1.73
194 195 8.497745 TCTTCTTCCTTCTCATATTGGCTTATT 58.502 33.333 0.00 0.00 0.00 1.40
195 196 8.455903 TTCTTCCTTCTCATATTGGCTTATTG 57.544 34.615 0.00 0.00 0.00 1.90
196 197 7.805163 TCTTCCTTCTCATATTGGCTTATTGA 58.195 34.615 0.00 0.00 0.00 2.57
197 198 7.935755 TCTTCCTTCTCATATTGGCTTATTGAG 59.064 37.037 0.00 0.00 0.00 3.02
198 199 6.537355 TCCTTCTCATATTGGCTTATTGAGG 58.463 40.000 0.00 0.00 0.00 3.86
199 200 6.101734 TCCTTCTCATATTGGCTTATTGAGGT 59.898 38.462 0.00 0.00 0.00 3.85
200 201 7.292356 TCCTTCTCATATTGGCTTATTGAGGTA 59.708 37.037 0.00 0.00 0.00 3.08
201 202 8.105829 CCTTCTCATATTGGCTTATTGAGGTAT 58.894 37.037 0.00 0.00 0.00 2.73
202 203 9.512588 CTTCTCATATTGGCTTATTGAGGTATT 57.487 33.333 0.00 0.00 0.00 1.89
203 204 9.866655 TTCTCATATTGGCTTATTGAGGTATTT 57.133 29.630 0.00 0.00 0.00 1.40
204 205 9.507329 TCTCATATTGGCTTATTGAGGTATTTC 57.493 33.333 0.00 0.00 0.00 2.17
205 206 9.288576 CTCATATTGGCTTATTGAGGTATTTCA 57.711 33.333 0.00 0.00 0.00 2.69
206 207 9.812347 TCATATTGGCTTATTGAGGTATTTCAT 57.188 29.630 0.00 0.00 0.00 2.57
208 209 6.959639 TTGGCTTATTGAGGTATTTCATCC 57.040 37.500 0.00 0.00 0.00 3.51
209 210 6.012337 TGGCTTATTGAGGTATTTCATCCA 57.988 37.500 0.00 0.00 0.00 3.41
210 211 6.430864 TGGCTTATTGAGGTATTTCATCCAA 58.569 36.000 0.00 0.00 0.00 3.53
211 212 6.321181 TGGCTTATTGAGGTATTTCATCCAAC 59.679 38.462 0.00 0.00 0.00 3.77
212 213 6.321181 GGCTTATTGAGGTATTTCATCCAACA 59.679 38.462 0.00 0.00 0.00 3.33
213 214 7.196331 GCTTATTGAGGTATTTCATCCAACAC 58.804 38.462 0.00 0.00 0.00 3.32
214 215 7.639113 TTATTGAGGTATTTCATCCAACACC 57.361 36.000 0.00 0.00 0.00 4.16
215 216 4.927267 TGAGGTATTTCATCCAACACCT 57.073 40.909 0.00 0.00 39.08 4.00
216 217 5.255397 TGAGGTATTTCATCCAACACCTT 57.745 39.130 0.00 0.00 36.54 3.50
217 218 5.009631 TGAGGTATTTCATCCAACACCTTG 58.990 41.667 0.00 0.00 36.54 3.61
218 219 3.763897 AGGTATTTCATCCAACACCTTGC 59.236 43.478 0.00 0.00 32.49 4.01
219 220 3.509575 GGTATTTCATCCAACACCTTGCA 59.490 43.478 0.00 0.00 0.00 4.08
220 221 4.160252 GGTATTTCATCCAACACCTTGCAT 59.840 41.667 0.00 0.00 0.00 3.96
221 222 3.663995 TTTCATCCAACACCTTGCATG 57.336 42.857 0.00 0.00 27.84 4.06
222 223 0.889994 TCATCCAACACCTTGCATGC 59.110 50.000 11.82 11.82 26.93 4.06
223 224 0.604073 CATCCAACACCTTGCATGCA 59.396 50.000 18.46 18.46 0.00 3.96
224 225 0.604578 ATCCAACACCTTGCATGCAC 59.395 50.000 22.58 0.00 0.00 4.57
225 226 1.372004 CCAACACCTTGCATGCACG 60.372 57.895 22.58 19.38 0.00 5.34
226 227 1.372004 CAACACCTTGCATGCACGG 60.372 57.895 34.66 34.66 40.66 4.94
229 230 2.203337 ACCTTGCATGCACGGTGT 60.203 55.556 39.19 21.68 45.17 4.16
230 231 2.260869 ACCTTGCATGCACGGTGTC 61.261 57.895 39.19 1.82 45.17 3.67
231 232 2.562912 CTTGCATGCACGGTGTCC 59.437 61.111 22.58 0.00 0.00 4.02
232 233 2.981560 CTTGCATGCACGGTGTCCC 61.982 63.158 22.58 0.00 0.00 4.46
233 234 3.781605 TTGCATGCACGGTGTCCCA 62.782 57.895 22.58 0.00 0.00 4.37
234 235 3.737172 GCATGCACGGTGTCCCAC 61.737 66.667 14.21 0.00 0.00 4.61
235 236 3.422303 CATGCACGGTGTCCCACG 61.422 66.667 10.24 0.00 34.83 4.94
236 237 4.697756 ATGCACGGTGTCCCACGG 62.698 66.667 10.24 1.00 39.91 4.94
253 254 4.864334 GCCAGGCCACGGAGGATG 62.864 72.222 15.19 0.00 41.22 3.51
254 255 4.864334 CCAGGCCACGGAGGATGC 62.864 72.222 5.01 0.00 41.22 3.91
255 256 4.100084 CAGGCCACGGAGGATGCA 62.100 66.667 5.01 0.00 41.22 3.96
256 257 3.790437 AGGCCACGGAGGATGCAG 61.790 66.667 5.01 0.00 41.22 4.41
257 258 4.864334 GGCCACGGAGGATGCAGG 62.864 72.222 0.00 0.00 41.22 4.85
259 260 4.100084 CCACGGAGGATGCAGGCA 62.100 66.667 0.00 0.00 41.22 4.75
260 261 2.046023 CACGGAGGATGCAGGCAA 60.046 61.111 0.00 0.00 0.00 4.52
261 262 2.110967 CACGGAGGATGCAGGCAAG 61.111 63.158 0.00 0.00 0.00 4.01
262 263 3.207669 CGGAGGATGCAGGCAAGC 61.208 66.667 0.00 0.00 0.00 4.01
263 264 2.832201 GGAGGATGCAGGCAAGCC 60.832 66.667 2.02 2.02 0.00 4.35
264 265 2.044650 GAGGATGCAGGCAAGCCA 60.045 61.111 14.40 0.00 38.92 4.75
265 266 2.362120 AGGATGCAGGCAAGCCAC 60.362 61.111 14.40 5.53 38.92 5.01
266 267 2.362120 GGATGCAGGCAAGCCACT 60.362 61.111 14.40 0.00 38.92 4.00
267 268 2.413142 GGATGCAGGCAAGCCACTC 61.413 63.158 14.40 4.04 38.92 3.51
268 269 1.676635 GATGCAGGCAAGCCACTCA 60.677 57.895 14.40 8.01 38.92 3.41
269 270 1.930908 GATGCAGGCAAGCCACTCAC 61.931 60.000 14.40 0.00 38.92 3.51
270 271 3.730761 GCAGGCAAGCCACTCACG 61.731 66.667 14.40 0.00 38.92 4.35
271 272 3.730761 CAGGCAAGCCACTCACGC 61.731 66.667 14.40 0.00 38.92 5.34
275 276 3.716006 CAAGCCACTCACGCGGTG 61.716 66.667 12.47 9.20 34.45 4.94
288 289 3.118454 CGGTGGCGCTACCTTGTG 61.118 66.667 35.74 19.63 38.62 3.33
289 290 3.431725 GGTGGCGCTACCTTGTGC 61.432 66.667 33.23 7.77 42.15 4.57
290 291 2.358737 GTGGCGCTACCTTGTGCT 60.359 61.111 13.67 0.00 42.46 4.40
291 292 1.966451 GTGGCGCTACCTTGTGCTT 60.966 57.895 13.67 0.00 42.46 3.91
292 293 1.965930 TGGCGCTACCTTGTGCTTG 60.966 57.895 7.64 0.00 42.46 4.01
293 294 1.966451 GGCGCTACCTTGTGCTTGT 60.966 57.895 7.64 0.00 42.46 3.16
294 295 1.497722 GCGCTACCTTGTGCTTGTC 59.502 57.895 0.00 0.00 40.01 3.18
295 296 1.912371 GCGCTACCTTGTGCTTGTCC 61.912 60.000 0.00 0.00 40.01 4.02
296 297 0.320771 CGCTACCTTGTGCTTGTCCT 60.321 55.000 0.00 0.00 0.00 3.85
297 298 1.443802 GCTACCTTGTGCTTGTCCTC 58.556 55.000 0.00 0.00 0.00 3.71
298 299 1.714794 CTACCTTGTGCTTGTCCTCG 58.285 55.000 0.00 0.00 0.00 4.63
299 300 1.272490 CTACCTTGTGCTTGTCCTCGA 59.728 52.381 0.00 0.00 0.00 4.04
300 301 0.249911 ACCTTGTGCTTGTCCTCGAC 60.250 55.000 0.00 0.00 0.00 4.20
301 302 0.034059 CCTTGTGCTTGTCCTCGACT 59.966 55.000 0.00 0.00 33.15 4.18
302 303 1.541233 CCTTGTGCTTGTCCTCGACTT 60.541 52.381 0.00 0.00 33.15 3.01
303 304 1.795286 CTTGTGCTTGTCCTCGACTTC 59.205 52.381 0.00 0.00 33.15 3.01
304 305 0.033504 TGTGCTTGTCCTCGACTTCC 59.966 55.000 0.00 0.00 33.15 3.46
305 306 0.318762 GTGCTTGTCCTCGACTTCCT 59.681 55.000 0.00 0.00 33.15 3.36
306 307 1.048601 TGCTTGTCCTCGACTTCCTT 58.951 50.000 0.00 0.00 33.15 3.36
307 308 2.029290 GTGCTTGTCCTCGACTTCCTTA 60.029 50.000 0.00 0.00 33.15 2.69
308 309 2.832129 TGCTTGTCCTCGACTTCCTTAT 59.168 45.455 0.00 0.00 33.15 1.73
309 310 4.021229 TGCTTGTCCTCGACTTCCTTATA 58.979 43.478 0.00 0.00 33.15 0.98
310 311 4.464951 TGCTTGTCCTCGACTTCCTTATAA 59.535 41.667 0.00 0.00 33.15 0.98
311 312 4.804665 GCTTGTCCTCGACTTCCTTATAAC 59.195 45.833 0.00 0.00 33.15 1.89
312 313 4.996788 TGTCCTCGACTTCCTTATAACC 57.003 45.455 0.00 0.00 33.15 2.85
313 314 4.607239 TGTCCTCGACTTCCTTATAACCT 58.393 43.478 0.00 0.00 33.15 3.50
314 315 4.401519 TGTCCTCGACTTCCTTATAACCTG 59.598 45.833 0.00 0.00 33.15 4.00
315 316 3.383825 TCCTCGACTTCCTTATAACCTGC 59.616 47.826 0.00 0.00 0.00 4.85
316 317 3.385111 CCTCGACTTCCTTATAACCTGCT 59.615 47.826 0.00 0.00 0.00 4.24
317 318 4.141914 CCTCGACTTCCTTATAACCTGCTT 60.142 45.833 0.00 0.00 0.00 3.91
318 319 5.068723 CCTCGACTTCCTTATAACCTGCTTA 59.931 44.000 0.00 0.00 0.00 3.09
319 320 6.239345 CCTCGACTTCCTTATAACCTGCTTAT 60.239 42.308 0.00 0.00 0.00 1.73
320 321 6.513180 TCGACTTCCTTATAACCTGCTTATG 58.487 40.000 0.00 0.00 0.00 1.90
321 322 6.097839 TCGACTTCCTTATAACCTGCTTATGT 59.902 38.462 0.00 0.00 0.00 2.29
322 323 6.421202 CGACTTCCTTATAACCTGCTTATGTC 59.579 42.308 0.00 0.00 0.00 3.06
323 324 7.195374 ACTTCCTTATAACCTGCTTATGTCA 57.805 36.000 0.00 0.00 0.00 3.58
324 325 7.048512 ACTTCCTTATAACCTGCTTATGTCAC 58.951 38.462 0.00 0.00 0.00 3.67
325 326 5.925509 TCCTTATAACCTGCTTATGTCACC 58.074 41.667 0.00 0.00 0.00 4.02
326 327 5.063880 CCTTATAACCTGCTTATGTCACCC 58.936 45.833 0.00 0.00 0.00 4.61
327 328 5.163195 CCTTATAACCTGCTTATGTCACCCT 60.163 44.000 0.00 0.00 0.00 4.34
328 329 6.042781 CCTTATAACCTGCTTATGTCACCCTA 59.957 42.308 0.00 0.00 0.00 3.53
329 330 7.256691 CCTTATAACCTGCTTATGTCACCCTAT 60.257 40.741 0.00 0.00 0.00 2.57
330 331 4.862641 AACCTGCTTATGTCACCCTATT 57.137 40.909 0.00 0.00 0.00 1.73
331 332 5.968676 AACCTGCTTATGTCACCCTATTA 57.031 39.130 0.00 0.00 0.00 0.98
332 333 6.515512 AACCTGCTTATGTCACCCTATTAT 57.484 37.500 0.00 0.00 0.00 1.28
333 334 7.626999 AACCTGCTTATGTCACCCTATTATA 57.373 36.000 0.00 0.00 0.00 0.98
334 335 7.005709 ACCTGCTTATGTCACCCTATTATAC 57.994 40.000 0.00 0.00 0.00 1.47
335 336 6.787957 ACCTGCTTATGTCACCCTATTATACT 59.212 38.462 0.00 0.00 0.00 2.12
336 337 7.292591 ACCTGCTTATGTCACCCTATTATACTT 59.707 37.037 0.00 0.00 0.00 2.24
337 338 7.604164 CCTGCTTATGTCACCCTATTATACTTG 59.396 40.741 0.00 0.00 0.00 3.16
338 339 6.934645 TGCTTATGTCACCCTATTATACTTGC 59.065 38.462 0.00 0.00 0.00 4.01
339 340 7.162082 GCTTATGTCACCCTATTATACTTGCT 58.838 38.462 0.00 0.00 0.00 3.91
340 341 7.332182 GCTTATGTCACCCTATTATACTTGCTC 59.668 40.741 0.00 0.00 0.00 4.26
341 342 8.492415 TTATGTCACCCTATTATACTTGCTCT 57.508 34.615 0.00 0.00 0.00 4.09
342 343 6.808321 TGTCACCCTATTATACTTGCTCTT 57.192 37.500 0.00 0.00 0.00 2.85
343 344 7.907841 TGTCACCCTATTATACTTGCTCTTA 57.092 36.000 0.00 0.00 0.00 2.10
344 345 8.313944 TGTCACCCTATTATACTTGCTCTTAA 57.686 34.615 0.00 0.00 0.00 1.85
345 346 8.934697 TGTCACCCTATTATACTTGCTCTTAAT 58.065 33.333 0.00 0.00 0.00 1.40
346 347 9.425577 GTCACCCTATTATACTTGCTCTTAATC 57.574 37.037 0.00 0.00 0.00 1.75
347 348 8.594550 TCACCCTATTATACTTGCTCTTAATCC 58.405 37.037 0.00 0.00 0.00 3.01
348 349 8.375506 CACCCTATTATACTTGCTCTTAATCCA 58.624 37.037 0.00 0.00 0.00 3.41
349 350 9.117223 ACCCTATTATACTTGCTCTTAATCCAT 57.883 33.333 0.00 0.00 0.00 3.41
350 351 9.388506 CCCTATTATACTTGCTCTTAATCCATG 57.611 37.037 0.00 0.00 0.00 3.66
355 356 7.992754 ATACTTGCTCTTAATCCATGAATCC 57.007 36.000 0.00 0.00 0.00 3.01
356 357 4.818546 ACTTGCTCTTAATCCATGAATCCG 59.181 41.667 0.00 0.00 0.00 4.18
357 358 3.743521 TGCTCTTAATCCATGAATCCGG 58.256 45.455 0.00 0.00 0.00 5.14
358 359 2.485814 GCTCTTAATCCATGAATCCGGC 59.514 50.000 0.00 0.00 0.00 6.13
359 360 3.077359 CTCTTAATCCATGAATCCGGCC 58.923 50.000 0.00 0.00 0.00 6.13
360 361 2.441375 TCTTAATCCATGAATCCGGCCA 59.559 45.455 2.24 0.00 0.00 5.36
361 362 2.270352 TAATCCATGAATCCGGCCAC 57.730 50.000 2.24 0.00 0.00 5.01
362 363 0.258484 AATCCATGAATCCGGCCACA 59.742 50.000 2.24 0.00 0.00 4.17
363 364 0.258484 ATCCATGAATCCGGCCACAA 59.742 50.000 2.24 0.00 0.00 3.33
364 365 0.038890 TCCATGAATCCGGCCACAAA 59.961 50.000 2.24 0.00 0.00 2.83
365 366 0.457035 CCATGAATCCGGCCACAAAG 59.543 55.000 2.24 0.00 0.00 2.77
366 367 1.462616 CATGAATCCGGCCACAAAGA 58.537 50.000 2.24 0.00 0.00 2.52
367 368 1.818060 CATGAATCCGGCCACAAAGAA 59.182 47.619 2.24 0.00 0.00 2.52
368 369 1.243902 TGAATCCGGCCACAAAGAAC 58.756 50.000 2.24 0.00 0.00 3.01
369 370 1.243902 GAATCCGGCCACAAAGAACA 58.756 50.000 2.24 0.00 0.00 3.18
370 371 1.818674 GAATCCGGCCACAAAGAACAT 59.181 47.619 2.24 0.00 0.00 2.71
371 372 1.923356 ATCCGGCCACAAAGAACATT 58.077 45.000 2.24 0.00 0.00 2.71
372 373 1.243902 TCCGGCCACAAAGAACATTC 58.756 50.000 2.24 0.00 0.00 2.67
373 374 0.958091 CCGGCCACAAAGAACATTCA 59.042 50.000 2.24 0.00 0.00 2.57
374 375 1.339610 CCGGCCACAAAGAACATTCAA 59.660 47.619 2.24 0.00 0.00 2.69
424 434 3.884037 ACAAAAGTCAACTGATCCCCT 57.116 42.857 0.00 0.00 0.00 4.79
467 480 7.948034 TGGAGTTTTCTTTAAAAGAGTCCAA 57.052 32.000 11.15 0.00 37.28 3.53
472 485 8.803235 AGTTTTCTTTAAAAGAGTCCAACTTGT 58.197 29.630 0.00 0.00 39.03 3.16
485 498 5.481473 AGTCCAACTTGTATTTCCATGCAAT 59.519 36.000 0.00 0.00 34.81 3.56
524 537 7.922505 CTGGAAGCATATATAGTCGATAAGC 57.077 40.000 0.00 0.00 0.00 3.09
525 538 7.404671 TGGAAGCATATATAGTCGATAAGCA 57.595 36.000 0.00 0.00 0.00 3.91
526 539 7.836842 TGGAAGCATATATAGTCGATAAGCAA 58.163 34.615 0.00 0.00 0.00 3.91
527 540 8.311109 TGGAAGCATATATAGTCGATAAGCAAA 58.689 33.333 0.00 0.00 0.00 3.68
528 541 9.319143 GGAAGCATATATAGTCGATAAGCAAAT 57.681 33.333 0.00 0.00 0.00 2.32
530 543 9.875691 AAGCATATATAGTCGATAAGCAAATCA 57.124 29.630 0.00 0.00 0.00 2.57
531 544 9.875691 AGCATATATAGTCGATAAGCAAATCAA 57.124 29.630 0.00 0.00 0.00 2.57
562 575 9.912634 TTTTTCGAGAAAGAGCAAATCAATAAT 57.087 25.926 0.00 0.00 0.00 1.28
719 792 7.009815 CACGGAAGTTAAGCTCGTATTTAATCA 59.990 37.037 0.00 0.00 46.40 2.57
787 879 4.764336 CGCTGGCCACAACATGCG 62.764 66.667 18.64 18.64 37.57 4.73
820 941 4.026062 TCAAGACATTTCAGTGAACGAACG 60.026 41.667 4.68 0.00 0.00 3.95
849 979 3.131223 ACATCTACCACAATCAGACTCCG 59.869 47.826 0.00 0.00 0.00 4.63
867 997 3.142838 GCAGCCGCCATGTTCCAT 61.143 61.111 0.00 0.00 0.00 3.41
868 998 2.802792 CAGCCGCCATGTTCCATG 59.197 61.111 0.00 0.00 0.00 3.66
893 1023 2.493278 ACCAGCTAAATCACAACATGCC 59.507 45.455 0.00 0.00 0.00 4.40
939 1074 6.017109 TCGTCGATTAATCATCTGATGAGACA 60.017 38.462 23.25 11.14 43.53 3.41
954 1093 4.142609 TGAGACAAGCTATCCAATGTCC 57.857 45.455 9.76 3.80 42.39 4.02
1001 1140 3.801050 CCTTACGAGCAACATCTCATCAG 59.199 47.826 0.00 0.00 33.41 2.90
1011 1150 5.116882 CAACATCTCATCAGCTTCTCATCA 58.883 41.667 0.00 0.00 0.00 3.07
1013 1152 3.815856 TCTCATCAGCTTCTCATCACC 57.184 47.619 0.00 0.00 0.00 4.02
1014 1153 3.372897 TCTCATCAGCTTCTCATCACCT 58.627 45.455 0.00 0.00 0.00 4.00
1129 1299 1.667212 CTGACATGCGCATTGCTCTTA 59.333 47.619 22.81 2.20 46.63 2.10
1375 1545 3.330720 AACTTCCCCAGCCTCCGG 61.331 66.667 0.00 0.00 0.00 5.14
1419 1589 3.745803 GGACGCCGTCGAGAAGGT 61.746 66.667 11.60 0.00 39.41 3.50
1591 1761 1.376037 GCCTCCGGTCTTCAACCTG 60.376 63.158 0.00 0.00 46.87 4.00
1648 1818 2.202756 GCGGAGGACATGGTCGTC 60.203 66.667 9.84 9.84 43.84 4.20
1945 2115 4.344865 AGCGCCAACATTCCCGGT 62.345 61.111 2.29 0.00 0.00 5.28
2075 2246 1.935873 CCAACGAATCATCATGCGTCT 59.064 47.619 0.00 0.00 44.18 4.18
2093 2264 3.049912 GTCTCATTTTGTTTTGCGGTCC 58.950 45.455 0.00 0.00 0.00 4.46
2113 2285 2.661537 GGTTTTTGCACTGGCGGC 60.662 61.111 0.00 0.00 45.35 6.53
2132 2312 2.413837 GCGTCACCTACTTGTGATTGT 58.586 47.619 0.00 0.00 46.20 2.71
2166 2346 4.728608 GGTCGAATTTCACGCATGTAATTC 59.271 41.667 12.99 12.99 43.71 2.17
2170 2350 6.611380 GAATTTCACGCATGTAATTCGTTT 57.389 33.333 8.72 0.00 40.54 3.60
2171 2351 5.990745 ATTTCACGCATGTAATTCGTTTG 57.009 34.783 0.00 0.00 33.84 2.93
2172 2352 4.475763 TTCACGCATGTAATTCGTTTGT 57.524 36.364 0.00 0.00 33.84 2.83
2173 2353 3.804688 TCACGCATGTAATTCGTTTGTG 58.195 40.909 0.00 0.00 33.84 3.33
2174 2354 3.495001 TCACGCATGTAATTCGTTTGTGA 59.505 39.130 0.00 0.00 33.84 3.58
2175 2355 3.840209 CACGCATGTAATTCGTTTGTGAG 59.160 43.478 0.00 0.00 33.84 3.51
2176 2356 3.120338 ACGCATGTAATTCGTTTGTGAGG 60.120 43.478 0.00 0.00 31.89 3.86
2177 2357 3.171277 GCATGTAATTCGTTTGTGAGGC 58.829 45.455 0.00 0.00 0.00 4.70
2178 2358 3.119849 GCATGTAATTCGTTTGTGAGGCT 60.120 43.478 0.00 0.00 0.00 4.58
2179 2359 4.615912 GCATGTAATTCGTTTGTGAGGCTT 60.616 41.667 0.00 0.00 0.00 4.35
2180 2360 4.742438 TGTAATTCGTTTGTGAGGCTTC 57.258 40.909 0.00 0.00 0.00 3.86
2202 2382 5.387279 TCGTTTGTTGTTTCAACTCTTCAC 58.613 37.500 12.66 3.51 0.00 3.18
2244 2433 5.243426 TGGTGCTACAGTTGTTCTTTTTC 57.757 39.130 0.00 0.00 0.00 2.29
2245 2434 4.947388 TGGTGCTACAGTTGTTCTTTTTCT 59.053 37.500 0.00 0.00 0.00 2.52
2246 2435 5.417580 TGGTGCTACAGTTGTTCTTTTTCTT 59.582 36.000 0.00 0.00 0.00 2.52
2247 2436 6.071616 TGGTGCTACAGTTGTTCTTTTTCTTT 60.072 34.615 0.00 0.00 0.00 2.52
2273 2462 9.941325 TTTTTGGCAAATCAAACAGATGTATAT 57.059 25.926 14.29 0.00 36.96 0.86
2298 2487 7.798596 AAATCAATCAGCGAGATTACAATCT 57.201 32.000 4.13 4.13 45.06 2.40
2299 2488 7.798596 AATCAATCAGCGAGATTACAATCTT 57.201 32.000 5.95 0.00 45.06 2.40
2300 2489 6.594284 TCAATCAGCGAGATTACAATCTTG 57.406 37.500 12.95 12.95 45.06 3.02
2306 2495 4.604843 CGAGATTACAATCTTGCTGCAA 57.395 40.909 15.16 15.16 45.39 4.08
2307 2496 4.585364 CGAGATTACAATCTTGCTGCAAG 58.415 43.478 31.26 31.26 45.39 4.01
2314 2503 3.731716 TCTTGCTGCAAGACACCAT 57.268 47.368 34.40 0.00 44.27 3.55
2315 2504 1.527034 TCTTGCTGCAAGACACCATC 58.473 50.000 34.40 0.00 44.27 3.51
2316 2505 1.202794 TCTTGCTGCAAGACACCATCA 60.203 47.619 34.40 15.10 44.27 3.07
2317 2506 1.199327 CTTGCTGCAAGACACCATCAG 59.801 52.381 32.99 6.40 43.42 2.90
2318 2507 1.505353 GCTGCAAGACACCATCAGC 59.495 57.895 0.00 0.00 42.46 4.26
2319 2508 1.792301 CTGCAAGACACCATCAGCG 59.208 57.895 0.00 0.00 34.07 5.18
2320 2509 0.671472 CTGCAAGACACCATCAGCGA 60.671 55.000 0.00 0.00 34.07 4.93
2321 2510 0.671472 TGCAAGACACCATCAGCGAG 60.671 55.000 0.00 0.00 34.35 5.03
2322 2511 0.390340 GCAAGACACCATCAGCGAGA 60.390 55.000 0.00 0.00 0.00 4.04
2323 2512 1.741732 GCAAGACACCATCAGCGAGAT 60.742 52.381 0.00 0.00 37.48 2.75
2324 2513 2.625737 CAAGACACCATCAGCGAGATT 58.374 47.619 0.00 0.00 33.72 2.40
2325 2514 3.785486 CAAGACACCATCAGCGAGATTA 58.215 45.455 0.00 0.00 33.72 1.75
2326 2515 3.444703 AGACACCATCAGCGAGATTAC 57.555 47.619 0.00 0.00 33.72 1.89
2327 2516 2.760650 AGACACCATCAGCGAGATTACA 59.239 45.455 0.00 0.00 33.72 2.41
2328 2517 3.195610 AGACACCATCAGCGAGATTACAA 59.804 43.478 0.00 0.00 33.72 2.41
2329 2518 4.122776 GACACCATCAGCGAGATTACAAT 58.877 43.478 0.00 0.00 33.72 2.71
2330 2519 4.122776 ACACCATCAGCGAGATTACAATC 58.877 43.478 0.00 0.00 33.72 2.67
2389 2578 7.447545 AGTGCGTGTACCATATCTTATAGAAGA 59.552 37.037 1.60 1.60 45.75 2.87
2390 2579 7.751348 GTGCGTGTACCATATCTTATAGAAGAG 59.249 40.741 5.94 0.00 44.90 2.85
2391 2580 7.094334 TGCGTGTACCATATCTTATAGAAGAGG 60.094 40.741 5.94 4.35 44.90 3.69
2392 2581 7.628794 GCGTGTACCATATCTTATAGAAGAGGG 60.629 44.444 5.94 9.28 44.90 4.30
2393 2582 7.148052 CGTGTACCATATCTTATAGAAGAGGGG 60.148 44.444 15.51 13.33 44.90 4.79
2394 2583 6.668283 TGTACCATATCTTATAGAAGAGGGGC 59.332 42.308 15.51 10.32 44.90 5.80
2443 2633 3.188159 TGTTACAGAGTGTCAACCACC 57.812 47.619 0.00 0.00 45.74 4.61
2452 2642 1.002900 GTGTCAACCACCACAACATCG 60.003 52.381 0.00 0.00 38.18 3.84
2485 2675 7.205297 TCCACACTCTACACTAAGTTTACAAC 58.795 38.462 0.00 0.00 0.00 3.32
2494 2684 6.228258 ACACTAAGTTTACAACGTGGATCAT 58.772 36.000 0.00 0.00 36.23 2.45
2497 2687 4.921470 AGTTTACAACGTGGATCATTCG 57.079 40.909 0.00 0.00 36.23 3.34
2538 2728 5.106948 ACAACATCTCAAACAACGCATCTAG 60.107 40.000 0.00 0.00 0.00 2.43
2539 2729 4.820897 ACATCTCAAACAACGCATCTAGA 58.179 39.130 0.00 0.00 0.00 2.43
2545 2735 3.460857 AACAACGCATCTAGATCTCCC 57.539 47.619 1.03 0.00 0.00 4.30
2564 2754 1.006337 TTGAACAAATGCGCCTGCC 60.006 52.632 4.18 0.00 41.78 4.85
2587 2777 2.799371 GCTCTACCCTCGACCACG 59.201 66.667 0.00 0.00 41.26 4.94
2588 2778 2.772691 GCTCTACCCTCGACCACGG 61.773 68.421 0.00 0.00 40.21 4.94
2623 2813 2.526432 ACCTCTAAAGACGGAGAAGCA 58.474 47.619 0.00 0.00 0.00 3.91
2638 2828 3.093057 AGAAGCACCATCGAAGACTACT 58.907 45.455 0.00 0.00 42.51 2.57
2645 2835 3.449018 ACCATCGAAGACTACTGCATTCT 59.551 43.478 0.00 0.00 42.51 2.40
2692 2882 3.119316 CGAGAGTGAAGATTGCCTGTAGT 60.119 47.826 0.00 0.00 0.00 2.73
2714 2904 1.228124 TTCGGCTTGTTCACCCCTG 60.228 57.895 0.00 0.00 0.00 4.45
2716 2906 2.991540 GGCTTGTTCACCCCTGCC 60.992 66.667 0.00 0.00 0.00 4.85
2717 2907 2.203480 GCTTGTTCACCCCTGCCA 60.203 61.111 0.00 0.00 0.00 4.92
2722 2912 0.482446 TGTTCACCCCTGCCATTCTT 59.518 50.000 0.00 0.00 0.00 2.52
2728 2918 1.308069 CCCCTGCCATTCTTGTCACG 61.308 60.000 0.00 0.00 0.00 4.35
2740 2930 1.608590 CTTGTCACGCACCATTCCTTT 59.391 47.619 0.00 0.00 0.00 3.11
2750 2940 4.390264 GCACCATTCCTTTAGGGTATCTC 58.610 47.826 0.00 0.00 36.25 2.75
2754 2944 3.814005 TTCCTTTAGGGTATCTCGTGC 57.186 47.619 0.00 0.00 36.25 5.34
2807 2997 0.107410 ACAAAGCGTTCTCCACACCA 60.107 50.000 0.00 0.00 0.00 4.17
2821 3011 0.586319 ACACCATTCTTGCGAACACG 59.414 50.000 0.00 0.00 30.67 4.49
2832 3022 0.162082 GCGAACACGCGTGTCAATAA 59.838 50.000 41.53 0.00 44.13 1.40
2873 3063 3.045634 TCTTCTTGGTCACAGAAAGGGA 58.954 45.455 0.00 0.00 0.00 4.20
2931 3137 3.084039 CCTGTTTCTCATTGCTAGCCAA 58.916 45.455 13.29 7.16 37.94 4.52
2951 3157 4.383649 CCAATTGAAGAAACGACATTGCAG 59.616 41.667 7.12 0.00 0.00 4.41
2968 3174 1.561643 CAGTGGGGCTCTAGACTTCA 58.438 55.000 0.00 0.00 0.00 3.02
2969 3175 1.480137 CAGTGGGGCTCTAGACTTCAG 59.520 57.143 0.00 0.00 0.00 3.02
2983 3189 3.258372 AGACTTCAGTGTGAAATCCGCTA 59.742 43.478 0.00 0.00 33.50 4.26
2991 3197 1.742831 GTGAAATCCGCTATTGGCACA 59.257 47.619 0.00 0.00 41.91 4.57
2992 3198 2.358898 GTGAAATCCGCTATTGGCACAT 59.641 45.455 0.00 0.00 39.30 3.21
2993 3199 2.358582 TGAAATCCGCTATTGGCACATG 59.641 45.455 0.00 0.00 39.30 3.21
2994 3200 2.057137 AATCCGCTATTGGCACATGT 57.943 45.000 0.00 0.00 39.30 3.21
2995 3201 2.057137 ATCCGCTATTGGCACATGTT 57.943 45.000 0.00 0.00 39.30 2.71
2996 3202 1.093972 TCCGCTATTGGCACATGTTG 58.906 50.000 0.00 0.00 39.30 3.33
2997 3203 0.101040 CCGCTATTGGCACATGTTGG 59.899 55.000 0.00 0.00 39.30 3.77
2998 3204 1.093972 CGCTATTGGCACATGTTGGA 58.906 50.000 0.00 0.00 39.30 3.53
2999 3205 1.472082 CGCTATTGGCACATGTTGGAA 59.528 47.619 0.00 0.00 39.30 3.53
3000 3206 2.094803 CGCTATTGGCACATGTTGGAAA 60.095 45.455 0.00 0.00 39.30 3.13
3001 3207 3.429272 CGCTATTGGCACATGTTGGAAAT 60.429 43.478 0.00 0.00 39.30 2.17
3002 3208 4.202000 CGCTATTGGCACATGTTGGAAATA 60.202 41.667 0.00 0.00 39.30 1.40
3003 3209 5.507817 CGCTATTGGCACATGTTGGAAATAT 60.508 40.000 0.00 0.00 39.30 1.28
3004 3210 7.491832 CGCTATTGGCACATGTTGGAAATATG 61.492 42.308 0.00 0.00 41.79 1.78
3012 3218 5.954296 CATGTTGGAAATATGCCCTAGAG 57.046 43.478 0.00 0.00 38.58 2.43
3013 3219 4.437682 TGTTGGAAATATGCCCTAGAGG 57.562 45.455 0.00 0.00 39.47 3.69
3031 3237 9.981460 CCCTAGAGGCAATAATAAAAGGATTAT 57.019 33.333 0.00 0.00 34.18 1.28
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 5.117584 AGAGACTAAATCTAGACTTCGCGA 58.882 41.667 3.71 3.71 38.00 5.87
3 4 5.006844 TGAGAGACTAAATCTAGACTTCGCG 59.993 44.000 0.00 0.00 38.00 5.87
8 9 7.406916 TGGAGTTGAGAGACTAAATCTAGACT 58.593 38.462 0.00 0.00 38.00 3.24
9 10 7.633193 TGGAGTTGAGAGACTAAATCTAGAC 57.367 40.000 0.00 0.00 38.00 2.59
10 11 8.651589 TTTGGAGTTGAGAGACTAAATCTAGA 57.348 34.615 0.00 0.00 38.00 2.43
11 12 9.145865 GTTTTGGAGTTGAGAGACTAAATCTAG 57.854 37.037 0.00 0.00 38.00 2.43
12 13 8.095169 GGTTTTGGAGTTGAGAGACTAAATCTA 58.905 37.037 0.00 0.00 38.00 1.98
13 14 6.937465 GGTTTTGGAGTTGAGAGACTAAATCT 59.063 38.462 0.00 0.00 41.91 2.40
14 15 6.128526 CGGTTTTGGAGTTGAGAGACTAAATC 60.129 42.308 0.00 0.00 0.00 2.17
15 16 5.701290 CGGTTTTGGAGTTGAGAGACTAAAT 59.299 40.000 0.00 0.00 0.00 1.40
16 17 5.054477 CGGTTTTGGAGTTGAGAGACTAAA 58.946 41.667 0.00 0.00 0.00 1.85
17 18 4.502604 CCGGTTTTGGAGTTGAGAGACTAA 60.503 45.833 0.00 0.00 0.00 2.24
18 19 3.006537 CCGGTTTTGGAGTTGAGAGACTA 59.993 47.826 0.00 0.00 0.00 2.59
19 20 2.224305 CCGGTTTTGGAGTTGAGAGACT 60.224 50.000 0.00 0.00 0.00 3.24
20 21 2.143925 CCGGTTTTGGAGTTGAGAGAC 58.856 52.381 0.00 0.00 0.00 3.36
21 22 2.043992 TCCGGTTTTGGAGTTGAGAGA 58.956 47.619 0.00 0.00 33.05 3.10
22 23 2.143925 GTCCGGTTTTGGAGTTGAGAG 58.856 52.381 0.00 0.00 39.14 3.20
23 24 1.487142 TGTCCGGTTTTGGAGTTGAGA 59.513 47.619 0.00 0.00 39.14 3.27
24 25 1.961793 TGTCCGGTTTTGGAGTTGAG 58.038 50.000 0.00 0.00 39.14 3.02
25 26 2.018515 GTTGTCCGGTTTTGGAGTTGA 58.981 47.619 0.00 0.00 39.14 3.18
26 27 2.021457 AGTTGTCCGGTTTTGGAGTTG 58.979 47.619 0.00 0.00 39.14 3.16
27 28 2.430248 AGTTGTCCGGTTTTGGAGTT 57.570 45.000 0.00 0.00 39.14 3.01
28 29 2.430248 AAGTTGTCCGGTTTTGGAGT 57.570 45.000 0.00 0.00 39.14 3.85
29 30 3.002965 GTGTAAGTTGTCCGGTTTTGGAG 59.997 47.826 0.00 0.00 39.14 3.86
30 31 2.944349 GTGTAAGTTGTCCGGTTTTGGA 59.056 45.455 0.00 0.00 35.04 3.53
31 32 2.033675 GGTGTAAGTTGTCCGGTTTTGG 59.966 50.000 0.00 0.00 0.00 3.28
32 33 2.033675 GGGTGTAAGTTGTCCGGTTTTG 59.966 50.000 0.00 0.00 0.00 2.44
33 34 2.300433 GGGTGTAAGTTGTCCGGTTTT 58.700 47.619 0.00 0.00 0.00 2.43
34 35 1.477377 GGGGTGTAAGTTGTCCGGTTT 60.477 52.381 0.00 0.00 0.00 3.27
35 36 0.109153 GGGGTGTAAGTTGTCCGGTT 59.891 55.000 0.00 0.00 0.00 4.44
36 37 1.055551 TGGGGTGTAAGTTGTCCGGT 61.056 55.000 0.00 0.00 0.00 5.28
37 38 0.108963 TTGGGGTGTAAGTTGTCCGG 59.891 55.000 0.00 0.00 0.00 5.14
38 39 1.605232 GTTTGGGGTGTAAGTTGTCCG 59.395 52.381 0.00 0.00 0.00 4.79
39 40 2.882761 GAGTTTGGGGTGTAAGTTGTCC 59.117 50.000 0.00 0.00 0.00 4.02
40 41 3.816994 AGAGTTTGGGGTGTAAGTTGTC 58.183 45.455 0.00 0.00 0.00 3.18
41 42 3.945640 AGAGTTTGGGGTGTAAGTTGT 57.054 42.857 0.00 0.00 0.00 3.32
42 43 4.204012 TCAAGAGTTTGGGGTGTAAGTTG 58.796 43.478 0.00 0.00 34.97 3.16
43 44 4.513406 TCAAGAGTTTGGGGTGTAAGTT 57.487 40.909 0.00 0.00 34.97 2.66
44 45 4.513406 TTCAAGAGTTTGGGGTGTAAGT 57.487 40.909 0.00 0.00 34.97 2.24
45 46 4.037565 GGTTTCAAGAGTTTGGGGTGTAAG 59.962 45.833 0.00 0.00 34.97 2.34
46 47 3.955551 GGTTTCAAGAGTTTGGGGTGTAA 59.044 43.478 0.00 0.00 34.97 2.41
47 48 3.558033 GGTTTCAAGAGTTTGGGGTGTA 58.442 45.455 0.00 0.00 34.97 2.90
48 49 2.384828 GGTTTCAAGAGTTTGGGGTGT 58.615 47.619 0.00 0.00 34.97 4.16
49 50 1.336755 CGGTTTCAAGAGTTTGGGGTG 59.663 52.381 0.00 0.00 34.97 4.61
50 51 1.687563 CGGTTTCAAGAGTTTGGGGT 58.312 50.000 0.00 0.00 34.97 4.95
51 52 0.958822 CCGGTTTCAAGAGTTTGGGG 59.041 55.000 0.00 0.00 34.97 4.96
52 53 1.607148 GTCCGGTTTCAAGAGTTTGGG 59.393 52.381 0.00 0.00 34.97 4.12
53 54 2.294074 TGTCCGGTTTCAAGAGTTTGG 58.706 47.619 0.00 0.00 34.97 3.28
54 55 4.364415 TTTGTCCGGTTTCAAGAGTTTG 57.636 40.909 0.00 0.00 35.57 2.93
55 56 5.592104 AATTTGTCCGGTTTCAAGAGTTT 57.408 34.783 0.00 0.00 0.00 2.66
56 57 5.592104 AAATTTGTCCGGTTTCAAGAGTT 57.408 34.783 0.00 1.39 0.00 3.01
57 58 5.826208 ACTAAATTTGTCCGGTTTCAAGAGT 59.174 36.000 0.00 5.85 0.00 3.24
58 59 6.313744 ACTAAATTTGTCCGGTTTCAAGAG 57.686 37.500 0.00 5.32 0.00 2.85
59 60 5.239963 GGACTAAATTTGTCCGGTTTCAAGA 59.760 40.000 18.05 0.00 43.55 3.02
60 61 5.458015 GGACTAAATTTGTCCGGTTTCAAG 58.542 41.667 18.05 0.84 43.55 3.02
61 62 5.441709 GGACTAAATTTGTCCGGTTTCAA 57.558 39.130 18.05 3.29 43.55 2.69
70 71 5.088739 CGCAGACAATGGACTAAATTTGTC 58.911 41.667 0.00 6.59 45.18 3.18
71 72 4.615912 GCGCAGACAATGGACTAAATTTGT 60.616 41.667 0.30 0.00 35.14 2.83
72 73 3.853671 GCGCAGACAATGGACTAAATTTG 59.146 43.478 0.30 0.00 0.00 2.32
73 74 3.505680 TGCGCAGACAATGGACTAAATTT 59.494 39.130 5.66 0.00 0.00 1.82
74 75 3.081061 TGCGCAGACAATGGACTAAATT 58.919 40.909 5.66 0.00 0.00 1.82
75 76 2.710377 TGCGCAGACAATGGACTAAAT 58.290 42.857 5.66 0.00 0.00 1.40
76 77 2.177394 TGCGCAGACAATGGACTAAA 57.823 45.000 5.66 0.00 0.00 1.85
77 78 2.177394 TTGCGCAGACAATGGACTAA 57.823 45.000 11.31 0.00 0.00 2.24
78 79 1.804151 GTTTGCGCAGACAATGGACTA 59.196 47.619 24.68 0.00 0.00 2.59
79 80 0.593128 GTTTGCGCAGACAATGGACT 59.407 50.000 24.68 0.00 0.00 3.85
80 81 0.387239 GGTTTGCGCAGACAATGGAC 60.387 55.000 29.39 9.84 0.00 4.02
81 82 1.523154 GGGTTTGCGCAGACAATGGA 61.523 55.000 29.39 1.24 0.00 3.41
82 83 1.080569 GGGTTTGCGCAGACAATGG 60.081 57.895 29.39 0.00 0.00 3.16
83 84 1.659233 TGGGTTTGCGCAGACAATG 59.341 52.632 29.39 0.00 33.46 2.82
84 85 4.172625 TGGGTTTGCGCAGACAAT 57.827 50.000 29.39 0.00 33.46 2.71
90 91 3.736100 CGATGCTGGGTTTGCGCA 61.736 61.111 5.66 5.66 38.14 6.09
92 93 3.434319 AGCGATGCTGGGTTTGCG 61.434 61.111 0.00 0.00 37.57 4.85
111 112 7.281774 AGACATATCAAAACCATGCTAAGTCAG 59.718 37.037 0.00 0.00 27.75 3.51
112 113 7.112122 AGACATATCAAAACCATGCTAAGTCA 58.888 34.615 0.00 0.00 27.75 3.41
113 114 7.559590 AGACATATCAAAACCATGCTAAGTC 57.440 36.000 0.00 0.00 0.00 3.01
114 115 7.944729 AAGACATATCAAAACCATGCTAAGT 57.055 32.000 0.00 0.00 0.00 2.24
115 116 8.246180 ACAAAGACATATCAAAACCATGCTAAG 58.754 33.333 0.00 0.00 0.00 2.18
116 117 8.121305 ACAAAGACATATCAAAACCATGCTAA 57.879 30.769 0.00 0.00 0.00 3.09
117 118 7.148086 GGACAAAGACATATCAAAACCATGCTA 60.148 37.037 0.00 0.00 0.00 3.49
118 119 6.350445 GGACAAAGACATATCAAAACCATGCT 60.350 38.462 0.00 0.00 0.00 3.79
119 120 5.807011 GGACAAAGACATATCAAAACCATGC 59.193 40.000 0.00 0.00 0.00 4.06
120 121 6.923012 TGGACAAAGACATATCAAAACCATG 58.077 36.000 0.00 0.00 0.00 3.66
121 122 7.178983 ACATGGACAAAGACATATCAAAACCAT 59.821 33.333 0.00 0.00 34.26 3.55
122 123 6.493115 ACATGGACAAAGACATATCAAAACCA 59.507 34.615 0.00 0.00 0.00 3.67
123 124 6.808212 CACATGGACAAAGACATATCAAAACC 59.192 38.462 0.00 0.00 0.00 3.27
124 125 6.808212 CCACATGGACAAAGACATATCAAAAC 59.192 38.462 0.00 0.00 37.39 2.43
125 126 6.572119 GCCACATGGACAAAGACATATCAAAA 60.572 38.462 0.87 0.00 37.39 2.44
126 127 5.105797 GCCACATGGACAAAGACATATCAAA 60.106 40.000 0.87 0.00 37.39 2.69
127 128 4.398988 GCCACATGGACAAAGACATATCAA 59.601 41.667 0.87 0.00 37.39 2.57
128 129 3.947196 GCCACATGGACAAAGACATATCA 59.053 43.478 0.87 0.00 37.39 2.15
129 130 3.947196 TGCCACATGGACAAAGACATATC 59.053 43.478 0.87 0.00 37.39 1.63
130 131 3.949754 CTGCCACATGGACAAAGACATAT 59.050 43.478 0.87 0.00 37.39 1.78
131 132 3.244875 ACTGCCACATGGACAAAGACATA 60.245 43.478 0.87 0.00 37.39 2.29
132 133 2.165167 CTGCCACATGGACAAAGACAT 58.835 47.619 0.87 0.00 37.39 3.06
133 134 1.133823 ACTGCCACATGGACAAAGACA 60.134 47.619 0.87 0.00 37.39 3.41
134 135 1.609208 ACTGCCACATGGACAAAGAC 58.391 50.000 0.87 0.00 37.39 3.01
135 136 3.719268 ATACTGCCACATGGACAAAGA 57.281 42.857 0.87 0.00 37.39 2.52
136 137 4.460382 AGAAATACTGCCACATGGACAAAG 59.540 41.667 0.87 0.00 37.39 2.77
137 138 4.406456 AGAAATACTGCCACATGGACAAA 58.594 39.130 0.87 0.00 37.39 2.83
138 139 4.009675 GAGAAATACTGCCACATGGACAA 58.990 43.478 0.87 0.00 37.39 3.18
139 140 3.264193 AGAGAAATACTGCCACATGGACA 59.736 43.478 0.87 0.00 37.39 4.02
140 141 3.873952 GAGAGAAATACTGCCACATGGAC 59.126 47.826 0.87 0.00 37.39 4.02
141 142 3.776969 AGAGAGAAATACTGCCACATGGA 59.223 43.478 0.87 0.00 37.39 3.41
142 143 4.125703 GAGAGAGAAATACTGCCACATGG 58.874 47.826 0.00 0.00 38.53 3.66
143 144 4.125703 GGAGAGAGAAATACTGCCACATG 58.874 47.826 0.00 0.00 0.00 3.21
144 145 4.036518 AGGAGAGAGAAATACTGCCACAT 58.963 43.478 0.00 0.00 0.00 3.21
145 146 3.445008 AGGAGAGAGAAATACTGCCACA 58.555 45.455 0.00 0.00 0.00 4.17
146 147 5.538433 AGATAGGAGAGAGAAATACTGCCAC 59.462 44.000 0.00 0.00 0.00 5.01
147 148 5.710646 AGATAGGAGAGAGAAATACTGCCA 58.289 41.667 0.00 0.00 0.00 4.92
148 149 6.493458 AGAAGATAGGAGAGAGAAATACTGCC 59.507 42.308 0.00 0.00 0.00 4.85
149 150 7.524717 AGAAGATAGGAGAGAGAAATACTGC 57.475 40.000 0.00 0.00 0.00 4.40
150 151 8.576442 GGAAGAAGATAGGAGAGAGAAATACTG 58.424 40.741 0.00 0.00 0.00 2.74
151 152 8.511126 AGGAAGAAGATAGGAGAGAGAAATACT 58.489 37.037 0.00 0.00 0.00 2.12
152 153 8.706322 AGGAAGAAGATAGGAGAGAGAAATAC 57.294 38.462 0.00 0.00 0.00 1.89
153 154 9.362151 GAAGGAAGAAGATAGGAGAGAGAAATA 57.638 37.037 0.00 0.00 0.00 1.40
154 155 8.067488 AGAAGGAAGAAGATAGGAGAGAGAAAT 58.933 37.037 0.00 0.00 0.00 2.17
155 156 7.418378 AGAAGGAAGAAGATAGGAGAGAGAAA 58.582 38.462 0.00 0.00 0.00 2.52
156 157 6.980577 AGAAGGAAGAAGATAGGAGAGAGAA 58.019 40.000 0.00 0.00 0.00 2.87
157 158 6.159575 TGAGAAGGAAGAAGATAGGAGAGAGA 59.840 42.308 0.00 0.00 0.00 3.10
158 159 6.364701 TGAGAAGGAAGAAGATAGGAGAGAG 58.635 44.000 0.00 0.00 0.00 3.20
159 160 6.334378 TGAGAAGGAAGAAGATAGGAGAGA 57.666 41.667 0.00 0.00 0.00 3.10
160 161 8.884124 ATATGAGAAGGAAGAAGATAGGAGAG 57.116 38.462 0.00 0.00 0.00 3.20
161 162 9.087871 CAATATGAGAAGGAAGAAGATAGGAGA 57.912 37.037 0.00 0.00 0.00 3.71
162 163 8.313292 CCAATATGAGAAGGAAGAAGATAGGAG 58.687 40.741 0.00 0.00 0.00 3.69
163 164 7.256475 GCCAATATGAGAAGGAAGAAGATAGGA 60.256 40.741 0.00 0.00 0.00 2.94
164 165 6.878389 GCCAATATGAGAAGGAAGAAGATAGG 59.122 42.308 0.00 0.00 0.00 2.57
165 166 7.678837 AGCCAATATGAGAAGGAAGAAGATAG 58.321 38.462 0.00 0.00 0.00 2.08
166 167 7.623999 AGCCAATATGAGAAGGAAGAAGATA 57.376 36.000 0.00 0.00 0.00 1.98
167 168 6.512514 AGCCAATATGAGAAGGAAGAAGAT 57.487 37.500 0.00 0.00 0.00 2.40
168 169 5.965033 AGCCAATATGAGAAGGAAGAAGA 57.035 39.130 0.00 0.00 0.00 2.87
169 170 8.566260 CAATAAGCCAATATGAGAAGGAAGAAG 58.434 37.037 0.00 0.00 0.00 2.85
170 171 8.274322 TCAATAAGCCAATATGAGAAGGAAGAA 58.726 33.333 0.00 0.00 0.00 2.52
171 172 7.805163 TCAATAAGCCAATATGAGAAGGAAGA 58.195 34.615 0.00 0.00 0.00 2.87
172 173 7.174599 CCTCAATAAGCCAATATGAGAAGGAAG 59.825 40.741 2.82 0.00 0.00 3.46
173 174 7.000472 CCTCAATAAGCCAATATGAGAAGGAA 59.000 38.462 2.82 0.00 0.00 3.36
174 175 6.101734 ACCTCAATAAGCCAATATGAGAAGGA 59.898 38.462 2.82 0.00 0.00 3.36
175 176 6.302269 ACCTCAATAAGCCAATATGAGAAGG 58.698 40.000 2.82 0.00 0.00 3.46
176 177 9.512588 AATACCTCAATAAGCCAATATGAGAAG 57.487 33.333 2.82 0.00 0.00 2.85
177 178 9.866655 AAATACCTCAATAAGCCAATATGAGAA 57.133 29.630 2.82 0.00 0.00 2.87
178 179 9.507329 GAAATACCTCAATAAGCCAATATGAGA 57.493 33.333 2.82 0.00 0.00 3.27
179 180 9.288576 TGAAATACCTCAATAAGCCAATATGAG 57.711 33.333 0.00 0.00 0.00 2.90
180 181 9.812347 ATGAAATACCTCAATAAGCCAATATGA 57.188 29.630 0.00 0.00 0.00 2.15
182 183 9.247861 GGATGAAATACCTCAATAAGCCAATAT 57.752 33.333 0.00 0.00 0.00 1.28
183 184 8.224025 TGGATGAAATACCTCAATAAGCCAATA 58.776 33.333 0.00 0.00 0.00 1.90
184 185 7.068702 TGGATGAAATACCTCAATAAGCCAAT 58.931 34.615 0.00 0.00 0.00 3.16
185 186 6.430864 TGGATGAAATACCTCAATAAGCCAA 58.569 36.000 0.00 0.00 0.00 4.52
186 187 6.012337 TGGATGAAATACCTCAATAAGCCA 57.988 37.500 0.00 0.00 0.00 4.75
187 188 6.321181 TGTTGGATGAAATACCTCAATAAGCC 59.679 38.462 0.00 0.00 0.00 4.35
188 189 7.196331 GTGTTGGATGAAATACCTCAATAAGC 58.804 38.462 0.00 0.00 0.00 3.09
189 190 7.557719 AGGTGTTGGATGAAATACCTCAATAAG 59.442 37.037 0.07 0.00 45.49 1.73
190 191 7.410174 AGGTGTTGGATGAAATACCTCAATAA 58.590 34.615 0.07 0.00 45.49 1.40
191 192 6.969043 AGGTGTTGGATGAAATACCTCAATA 58.031 36.000 0.07 0.00 45.49 1.90
192 193 5.831103 AGGTGTTGGATGAAATACCTCAAT 58.169 37.500 0.07 0.00 45.49 2.57
193 194 5.255397 AGGTGTTGGATGAAATACCTCAA 57.745 39.130 0.07 0.00 45.49 3.02
194 195 4.927267 AGGTGTTGGATGAAATACCTCA 57.073 40.909 0.07 0.00 45.49 3.86
197 198 3.509575 TGCAAGGTGTTGGATGAAATACC 59.490 43.478 0.00 0.00 40.58 2.73
198 199 4.782019 TGCAAGGTGTTGGATGAAATAC 57.218 40.909 0.00 0.00 33.87 1.89
205 206 0.604578 GTGCATGCAAGGTGTTGGAT 59.395 50.000 24.58 0.00 44.96 3.41
206 207 1.794151 CGTGCATGCAAGGTGTTGGA 61.794 55.000 24.58 0.00 38.53 3.53
207 208 1.372004 CGTGCATGCAAGGTGTTGG 60.372 57.895 24.58 0.54 33.87 3.77
208 209 1.372004 CCGTGCATGCAAGGTGTTG 60.372 57.895 35.81 16.47 40.02 3.33
209 210 3.041701 CCGTGCATGCAAGGTGTT 58.958 55.556 35.81 0.00 40.02 3.32
214 215 2.562912 GGACACCGTGCATGCAAG 59.437 61.111 24.58 24.55 0.00 4.01
215 216 2.983030 GGGACACCGTGCATGCAA 60.983 61.111 24.58 3.50 0.00 4.08
216 217 4.262089 TGGGACACCGTGCATGCA 62.262 61.111 18.46 18.46 40.75 3.96
236 237 4.864334 CATCCTCCGTGGCCTGGC 62.864 72.222 11.05 11.05 35.26 4.85
237 238 4.864334 GCATCCTCCGTGGCCTGG 62.864 72.222 3.32 6.23 35.26 4.45
238 239 4.100084 TGCATCCTCCGTGGCCTG 62.100 66.667 3.32 0.00 35.26 4.85
239 240 3.790437 CTGCATCCTCCGTGGCCT 61.790 66.667 3.32 0.00 35.26 5.19
240 241 4.864334 CCTGCATCCTCCGTGGCC 62.864 72.222 0.00 0.00 35.26 5.36
242 243 3.626996 TTGCCTGCATCCTCCGTGG 62.627 63.158 0.00 0.00 37.10 4.94
243 244 2.046023 TTGCCTGCATCCTCCGTG 60.046 61.111 0.00 0.00 0.00 4.94
244 245 2.270205 CTTGCCTGCATCCTCCGT 59.730 61.111 0.00 0.00 0.00 4.69
245 246 3.207669 GCTTGCCTGCATCCTCCG 61.208 66.667 0.00 0.00 0.00 4.63
246 247 2.832201 GGCTTGCCTGCATCCTCC 60.832 66.667 4.11 0.00 34.04 4.30
247 248 2.044650 TGGCTTGCCTGCATCCTC 60.045 61.111 13.18 0.00 34.04 3.71
248 249 2.362120 GTGGCTTGCCTGCATCCT 60.362 61.111 13.18 0.00 34.04 3.24
249 250 2.362120 AGTGGCTTGCCTGCATCC 60.362 61.111 13.18 0.00 34.04 3.51
250 251 1.676635 TGAGTGGCTTGCCTGCATC 60.677 57.895 13.18 6.20 34.04 3.91
251 252 1.975407 GTGAGTGGCTTGCCTGCAT 60.975 57.895 13.18 0.00 34.04 3.96
252 253 2.595463 GTGAGTGGCTTGCCTGCA 60.595 61.111 13.18 5.52 34.04 4.41
253 254 3.730761 CGTGAGTGGCTTGCCTGC 61.731 66.667 13.18 6.01 0.00 4.85
254 255 3.730761 GCGTGAGTGGCTTGCCTG 61.731 66.667 13.18 0.00 0.00 4.85
271 272 3.118454 CACAAGGTAGCGCCACCG 61.118 66.667 19.45 8.81 43.84 4.94
272 273 3.431725 GCACAAGGTAGCGCCACC 61.432 66.667 17.98 17.98 40.61 4.61
273 274 1.966451 AAGCACAAGGTAGCGCCAC 60.966 57.895 2.29 0.00 40.61 5.01
274 275 1.965930 CAAGCACAAGGTAGCGCCA 60.966 57.895 2.29 0.00 40.61 5.69
275 276 1.912371 GACAAGCACAAGGTAGCGCC 61.912 60.000 2.29 0.00 35.48 6.53
276 277 1.497722 GACAAGCACAAGGTAGCGC 59.502 57.895 0.00 0.00 35.48 5.92
277 278 0.320771 AGGACAAGCACAAGGTAGCG 60.321 55.000 0.00 0.00 35.48 4.26
278 279 1.443802 GAGGACAAGCACAAGGTAGC 58.556 55.000 0.00 0.00 0.00 3.58
279 280 1.272490 TCGAGGACAAGCACAAGGTAG 59.728 52.381 0.00 0.00 0.00 3.18
280 281 1.000506 GTCGAGGACAAGCACAAGGTA 59.999 52.381 0.00 0.00 32.09 3.08
281 282 0.249911 GTCGAGGACAAGCACAAGGT 60.250 55.000 0.00 0.00 32.09 3.50
282 283 0.034059 AGTCGAGGACAAGCACAAGG 59.966 55.000 0.00 0.00 34.60 3.61
283 284 1.795286 GAAGTCGAGGACAAGCACAAG 59.205 52.381 0.00 0.00 34.60 3.16
284 285 1.540363 GGAAGTCGAGGACAAGCACAA 60.540 52.381 0.00 0.00 34.60 3.33
285 286 0.033504 GGAAGTCGAGGACAAGCACA 59.966 55.000 0.00 0.00 34.60 4.57
286 287 0.318762 AGGAAGTCGAGGACAAGCAC 59.681 55.000 0.00 0.00 34.60 4.40
287 288 1.048601 AAGGAAGTCGAGGACAAGCA 58.951 50.000 0.00 0.00 34.60 3.91
288 289 3.528597 ATAAGGAAGTCGAGGACAAGC 57.471 47.619 0.00 0.00 34.60 4.01
289 290 5.127356 AGGTTATAAGGAAGTCGAGGACAAG 59.873 44.000 0.00 0.00 34.60 3.16
290 291 5.021458 AGGTTATAAGGAAGTCGAGGACAA 58.979 41.667 0.00 0.00 34.60 3.18
291 292 4.401519 CAGGTTATAAGGAAGTCGAGGACA 59.598 45.833 0.00 0.00 34.60 4.02
292 293 4.737055 GCAGGTTATAAGGAAGTCGAGGAC 60.737 50.000 0.00 0.00 0.00 3.85
293 294 3.383825 GCAGGTTATAAGGAAGTCGAGGA 59.616 47.826 0.00 0.00 0.00 3.71
294 295 3.385111 AGCAGGTTATAAGGAAGTCGAGG 59.615 47.826 0.00 0.00 0.00 4.63
295 296 4.657436 AGCAGGTTATAAGGAAGTCGAG 57.343 45.455 0.00 0.00 0.00 4.04
296 297 6.097839 ACATAAGCAGGTTATAAGGAAGTCGA 59.902 38.462 4.52 0.00 29.54 4.20
297 298 6.281405 ACATAAGCAGGTTATAAGGAAGTCG 58.719 40.000 4.52 0.00 29.54 4.18
298 299 7.224949 GTGACATAAGCAGGTTATAAGGAAGTC 59.775 40.741 4.52 7.65 29.54 3.01
299 300 7.048512 GTGACATAAGCAGGTTATAAGGAAGT 58.951 38.462 4.52 0.00 29.54 3.01
300 301 6.483640 GGTGACATAAGCAGGTTATAAGGAAG 59.516 42.308 4.52 0.00 29.54 3.46
301 302 6.354130 GGTGACATAAGCAGGTTATAAGGAA 58.646 40.000 4.52 0.00 29.54 3.36
302 303 5.163237 GGGTGACATAAGCAGGTTATAAGGA 60.163 44.000 4.52 0.00 29.54 3.36
303 304 5.063880 GGGTGACATAAGCAGGTTATAAGG 58.936 45.833 4.52 0.00 29.54 2.69
304 305 5.930135 AGGGTGACATAAGCAGGTTATAAG 58.070 41.667 4.52 0.00 29.54 1.73
305 306 5.968676 AGGGTGACATAAGCAGGTTATAA 57.031 39.130 4.52 0.00 29.54 0.98
306 307 7.626999 AATAGGGTGACATAAGCAGGTTATA 57.373 36.000 4.52 0.00 29.54 0.98
307 308 6.515512 AATAGGGTGACATAAGCAGGTTAT 57.484 37.500 0.00 0.00 0.00 1.89
308 309 5.968676 AATAGGGTGACATAAGCAGGTTA 57.031 39.130 0.00 0.00 0.00 2.85
309 310 4.862641 AATAGGGTGACATAAGCAGGTT 57.137 40.909 0.00 0.00 0.00 3.50
310 311 6.787957 AGTATAATAGGGTGACATAAGCAGGT 59.212 38.462 0.00 0.00 0.00 4.00
311 312 7.246171 AGTATAATAGGGTGACATAAGCAGG 57.754 40.000 0.00 0.00 0.00 4.85
312 313 7.118390 GCAAGTATAATAGGGTGACATAAGCAG 59.882 40.741 0.00 0.00 0.00 4.24
313 314 6.934645 GCAAGTATAATAGGGTGACATAAGCA 59.065 38.462 0.00 0.00 0.00 3.91
314 315 7.162082 AGCAAGTATAATAGGGTGACATAAGC 58.838 38.462 0.00 0.00 0.00 3.09
315 316 8.589338 AGAGCAAGTATAATAGGGTGACATAAG 58.411 37.037 0.00 0.00 0.00 1.73
316 317 8.492415 AGAGCAAGTATAATAGGGTGACATAA 57.508 34.615 0.00 0.00 0.00 1.90
317 318 8.492415 AAGAGCAAGTATAATAGGGTGACATA 57.508 34.615 0.00 0.00 0.00 2.29
318 319 7.380423 AAGAGCAAGTATAATAGGGTGACAT 57.620 36.000 0.00 0.00 0.00 3.06
319 320 6.808321 AAGAGCAAGTATAATAGGGTGACA 57.192 37.500 0.00 0.00 0.00 3.58
320 321 9.425577 GATTAAGAGCAAGTATAATAGGGTGAC 57.574 37.037 0.00 0.00 0.00 3.67
321 322 8.594550 GGATTAAGAGCAAGTATAATAGGGTGA 58.405 37.037 0.00 0.00 0.00 4.02
322 323 8.375506 TGGATTAAGAGCAAGTATAATAGGGTG 58.624 37.037 0.00 0.00 0.00 4.61
323 324 8.506196 TGGATTAAGAGCAAGTATAATAGGGT 57.494 34.615 0.00 0.00 0.00 4.34
324 325 9.388506 CATGGATTAAGAGCAAGTATAATAGGG 57.611 37.037 0.00 0.00 0.00 3.53
329 330 9.507329 GGATTCATGGATTAAGAGCAAGTATAA 57.493 33.333 0.00 0.00 0.00 0.98
330 331 7.819415 CGGATTCATGGATTAAGAGCAAGTATA 59.181 37.037 0.00 0.00 0.00 1.47
331 332 6.652481 CGGATTCATGGATTAAGAGCAAGTAT 59.348 38.462 0.00 0.00 0.00 2.12
332 333 5.991606 CGGATTCATGGATTAAGAGCAAGTA 59.008 40.000 0.00 0.00 0.00 2.24
333 334 4.818546 CGGATTCATGGATTAAGAGCAAGT 59.181 41.667 0.00 0.00 0.00 3.16
334 335 4.214971 CCGGATTCATGGATTAAGAGCAAG 59.785 45.833 0.00 0.00 0.00 4.01
335 336 4.136796 CCGGATTCATGGATTAAGAGCAA 58.863 43.478 0.00 0.00 0.00 3.91
336 337 3.743521 CCGGATTCATGGATTAAGAGCA 58.256 45.455 0.00 0.00 0.00 4.26
337 338 2.485814 GCCGGATTCATGGATTAAGAGC 59.514 50.000 5.05 0.00 0.00 4.09
338 339 3.077359 GGCCGGATTCATGGATTAAGAG 58.923 50.000 5.05 0.00 0.00 2.85
339 340 2.441375 TGGCCGGATTCATGGATTAAGA 59.559 45.455 5.05 0.00 0.00 2.10
340 341 2.554032 GTGGCCGGATTCATGGATTAAG 59.446 50.000 5.05 0.00 0.00 1.85
341 342 2.092158 TGTGGCCGGATTCATGGATTAA 60.092 45.455 5.05 0.00 0.00 1.40
342 343 1.492599 TGTGGCCGGATTCATGGATTA 59.507 47.619 5.05 0.00 0.00 1.75
343 344 0.258484 TGTGGCCGGATTCATGGATT 59.742 50.000 5.05 0.00 0.00 3.01
344 345 0.258484 TTGTGGCCGGATTCATGGAT 59.742 50.000 5.05 0.00 0.00 3.41
345 346 0.038890 TTTGTGGCCGGATTCATGGA 59.961 50.000 5.05 0.00 0.00 3.41
346 347 0.457035 CTTTGTGGCCGGATTCATGG 59.543 55.000 5.05 0.00 0.00 3.66
347 348 1.462616 TCTTTGTGGCCGGATTCATG 58.537 50.000 5.05 0.00 0.00 3.07
348 349 1.818674 GTTCTTTGTGGCCGGATTCAT 59.181 47.619 5.05 0.00 0.00 2.57
349 350 1.243902 GTTCTTTGTGGCCGGATTCA 58.756 50.000 5.05 0.00 0.00 2.57
350 351 1.243902 TGTTCTTTGTGGCCGGATTC 58.756 50.000 5.05 0.00 0.00 2.52
351 352 1.923356 ATGTTCTTTGTGGCCGGATT 58.077 45.000 5.05 0.00 0.00 3.01
352 353 1.818674 GAATGTTCTTTGTGGCCGGAT 59.181 47.619 5.05 0.00 0.00 4.18
353 354 1.243902 GAATGTTCTTTGTGGCCGGA 58.756 50.000 5.05 0.00 0.00 5.14
354 355 0.958091 TGAATGTTCTTTGTGGCCGG 59.042 50.000 0.00 0.00 0.00 6.13
355 356 2.664916 CTTGAATGTTCTTTGTGGCCG 58.335 47.619 0.00 0.00 0.00 6.13
356 357 2.407090 GCTTGAATGTTCTTTGTGGCC 58.593 47.619 0.00 0.00 0.00 5.36
357 358 2.224018 TGGCTTGAATGTTCTTTGTGGC 60.224 45.455 0.00 0.00 0.00 5.01
358 359 3.645884 CTGGCTTGAATGTTCTTTGTGG 58.354 45.455 0.00 0.00 0.00 4.17
359 360 3.054878 GCTGGCTTGAATGTTCTTTGTG 58.945 45.455 0.00 0.00 0.00 3.33
360 361 2.694628 TGCTGGCTTGAATGTTCTTTGT 59.305 40.909 0.00 0.00 0.00 2.83
361 362 3.374220 TGCTGGCTTGAATGTTCTTTG 57.626 42.857 0.00 0.00 0.00 2.77
362 363 3.385755 ACTTGCTGGCTTGAATGTTCTTT 59.614 39.130 0.00 0.00 0.00 2.52
363 364 2.961062 ACTTGCTGGCTTGAATGTTCTT 59.039 40.909 0.00 0.00 0.00 2.52
364 365 2.590821 ACTTGCTGGCTTGAATGTTCT 58.409 42.857 0.00 0.00 0.00 3.01
365 366 3.375782 AACTTGCTGGCTTGAATGTTC 57.624 42.857 0.00 0.00 0.00 3.18
366 367 3.825143 AAACTTGCTGGCTTGAATGTT 57.175 38.095 0.00 0.00 0.00 2.71
367 368 3.825143 AAAACTTGCTGGCTTGAATGT 57.175 38.095 0.00 0.00 0.00 2.71
392 394 4.364415 TGACTTTTGTACAGCCAACAAC 57.636 40.909 0.00 0.00 36.61 3.32
400 402 4.455877 GGGGATCAGTTGACTTTTGTACAG 59.544 45.833 0.00 0.00 0.00 2.74
424 434 5.172687 TCCAACAACTGCCTATATCACAA 57.827 39.130 0.00 0.00 0.00 3.33
467 480 4.943705 AGTCGATTGCATGGAAATACAAGT 59.056 37.500 2.94 0.00 0.00 3.16
472 485 3.876914 GGTGAGTCGATTGCATGGAAATA 59.123 43.478 2.94 0.00 0.00 1.40
485 498 1.293179 CCAGCACATGGTGAGTCGA 59.707 57.895 12.54 0.00 45.66 4.20
536 549 9.912634 ATTATTGATTTGCTCTTTCTCGAAAAA 57.087 25.926 0.00 0.00 0.00 1.94
537 550 9.912634 AATTATTGATTTGCTCTTTCTCGAAAA 57.087 25.926 0.00 0.00 0.00 2.29
538 551 9.912634 AAATTATTGATTTGCTCTTTCTCGAAA 57.087 25.926 0.00 0.00 36.61 3.46
539 552 9.345517 CAAATTATTGATTTGCTCTTTCTCGAA 57.654 29.630 1.48 0.00 45.72 3.71
540 553 8.900511 CAAATTATTGATTTGCTCTTTCTCGA 57.099 30.769 1.48 0.00 45.72 4.04
559 572 6.595682 TGGTTTTTGGCTTCCAATCAAATTA 58.404 32.000 0.00 0.00 43.55 1.40
562 575 4.494091 TGGTTTTTGGCTTCCAATCAAA 57.506 36.364 0.00 0.00 43.55 2.69
669 733 6.376864 TGATAATTGTGATGGGAATGTTCGTT 59.623 34.615 0.00 0.00 0.00 3.85
671 735 6.201517 GTGATAATTGTGATGGGAATGTTCG 58.798 40.000 0.00 0.00 0.00 3.95
719 792 8.922237 TGATATTGTTGGCACCATTATAATTGT 58.078 29.630 0.00 0.00 0.00 2.71
765 857 3.357079 GTTGTGGCCAGCGAGGTG 61.357 66.667 5.11 0.00 40.61 4.00
787 879 7.981789 TCACTGAAATGTCTTGATGAGGTATAC 59.018 37.037 0.00 0.00 0.00 1.47
820 941 6.533367 GTCTGATTGTGGTAGATGTTCTCTTC 59.467 42.308 0.00 0.00 35.28 2.87
865 995 5.163632 TGTTGTGATTTAGCTGGTATGCATG 60.164 40.000 10.16 0.00 34.99 4.06
866 996 4.949238 TGTTGTGATTTAGCTGGTATGCAT 59.051 37.500 3.79 3.79 34.99 3.96
867 997 4.331108 TGTTGTGATTTAGCTGGTATGCA 58.669 39.130 0.00 0.00 34.99 3.96
868 998 4.963276 TGTTGTGATTTAGCTGGTATGC 57.037 40.909 0.00 0.00 0.00 3.14
939 1074 3.805108 GCATCGAGGACATTGGATAGCTT 60.805 47.826 0.00 0.00 0.00 3.74
954 1093 3.612860 GGGCTATTTATACGTGCATCGAG 59.387 47.826 14.18 2.49 42.86 4.04
1001 1140 3.238108 TCGAGAAAGGTGATGAGAAGC 57.762 47.619 0.00 0.00 0.00 3.86
1036 1198 9.747898 TCCTGAAACTAATTTATCAGCCTTTTA 57.252 29.630 0.00 0.00 38.34 1.52
1037 1199 8.650143 TCCTGAAACTAATTTATCAGCCTTTT 57.350 30.769 0.00 0.00 38.34 2.27
1050 1212 3.009473 TGCCTCAAGCTCCTGAAACTAAT 59.991 43.478 0.00 0.00 44.23 1.73
1057 1223 0.473755 TTGTTGCCTCAAGCTCCTGA 59.526 50.000 0.00 0.00 44.23 3.86
1058 1224 1.201647 CATTGTTGCCTCAAGCTCCTG 59.798 52.381 0.00 0.00 44.23 3.86
1059 1225 1.542492 CATTGTTGCCTCAAGCTCCT 58.458 50.000 0.00 0.00 44.23 3.69
1060 1226 0.529378 CCATTGTTGCCTCAAGCTCC 59.471 55.000 0.00 0.00 44.23 4.70
1375 1545 1.084370 CGTCGATGACCTCAAAGCCC 61.084 60.000 0.00 0.00 0.00 5.19
1381 1551 4.492160 GCGGCGTCGATGACCTCA 62.492 66.667 16.53 0.00 39.00 3.86
1648 1818 4.767255 GTGTGGGCGCCAGAGAGG 62.767 72.222 30.85 0.00 41.84 3.69
1945 2115 1.440618 TAAACTTGGCCTCCCACTGA 58.559 50.000 3.32 0.00 41.97 3.41
2075 2246 3.452474 CAAGGACCGCAAAACAAAATGA 58.548 40.909 0.00 0.00 0.00 2.57
2093 2264 0.875474 CCGCCAGTGCAAAAACCAAG 60.875 55.000 0.00 0.00 37.32 3.61
2132 2312 1.254026 AATTCGACCGAGGTCACTCA 58.746 50.000 20.75 3.13 44.17 3.41
2166 2346 1.063469 ACAAACGAAGCCTCACAAACG 59.937 47.619 0.00 0.00 0.00 3.60
2167 2347 2.844122 ACAAACGAAGCCTCACAAAC 57.156 45.000 0.00 0.00 0.00 2.93
2168 2348 2.490115 ACAACAAACGAAGCCTCACAAA 59.510 40.909 0.00 0.00 0.00 2.83
2169 2349 2.088423 ACAACAAACGAAGCCTCACAA 58.912 42.857 0.00 0.00 0.00 3.33
2170 2350 1.745232 ACAACAAACGAAGCCTCACA 58.255 45.000 0.00 0.00 0.00 3.58
2171 2351 2.844122 AACAACAAACGAAGCCTCAC 57.156 45.000 0.00 0.00 0.00 3.51
2172 2352 2.750166 TGAAACAACAAACGAAGCCTCA 59.250 40.909 0.00 0.00 0.00 3.86
2173 2353 3.414549 TGAAACAACAAACGAAGCCTC 57.585 42.857 0.00 0.00 0.00 4.70
2174 2354 3.192633 AGTTGAAACAACAAACGAAGCCT 59.807 39.130 15.29 0.00 0.00 4.58
2175 2355 3.507786 AGTTGAAACAACAAACGAAGCC 58.492 40.909 15.29 0.00 0.00 4.35
2176 2356 4.412207 AGAGTTGAAACAACAAACGAAGC 58.588 39.130 15.29 0.00 0.00 3.86
2177 2357 6.032460 GTGAAGAGTTGAAACAACAAACGAAG 59.968 38.462 15.29 0.00 0.00 3.79
2178 2358 5.854338 GTGAAGAGTTGAAACAACAAACGAA 59.146 36.000 15.29 0.00 0.00 3.85
2179 2359 5.049336 TGTGAAGAGTTGAAACAACAAACGA 60.049 36.000 15.29 0.00 0.00 3.85
2180 2360 5.150683 TGTGAAGAGTTGAAACAACAAACG 58.849 37.500 15.29 0.00 0.00 3.60
2202 2382 5.409214 CACCAATAAACCAGCCAAAGAATTG 59.591 40.000 0.00 0.00 36.25 2.32
2247 2436 9.941325 ATATACATCTGTTTGATTTGCCAAAAA 57.059 25.926 0.00 0.00 37.72 1.94
2273 2462 8.893219 AGATTGTAATCTCGCTGATTGATTTA 57.107 30.769 11.85 0.00 41.82 1.40
2274 2463 7.798596 AGATTGTAATCTCGCTGATTGATTT 57.201 32.000 11.85 0.00 41.82 2.17
2300 2489 1.505353 GCTGATGGTGTCTTGCAGC 59.495 57.895 0.00 0.00 44.11 5.25
2301 2490 0.671472 TCGCTGATGGTGTCTTGCAG 60.671 55.000 0.00 0.00 0.00 4.41
2302 2491 0.671472 CTCGCTGATGGTGTCTTGCA 60.671 55.000 0.00 0.00 0.00 4.08
2303 2492 0.390340 TCTCGCTGATGGTGTCTTGC 60.390 55.000 0.00 0.00 0.00 4.01
2304 2493 2.306341 ATCTCGCTGATGGTGTCTTG 57.694 50.000 0.00 0.00 33.43 3.02
2305 2494 3.195610 TGTAATCTCGCTGATGGTGTCTT 59.804 43.478 0.00 0.00 35.21 3.01
2306 2495 2.760650 TGTAATCTCGCTGATGGTGTCT 59.239 45.455 0.00 0.00 35.21 3.41
2307 2496 3.165058 TGTAATCTCGCTGATGGTGTC 57.835 47.619 0.00 0.00 35.21 3.67
2308 2497 3.610040 TTGTAATCTCGCTGATGGTGT 57.390 42.857 0.00 0.00 35.21 4.16
2309 2498 4.375272 AGATTGTAATCTCGCTGATGGTG 58.625 43.478 1.35 0.00 41.82 4.17
2310 2499 4.679373 AGATTGTAATCTCGCTGATGGT 57.321 40.909 1.35 0.00 41.82 3.55
2342 2531 2.486203 TCGTGCGTATTCAGGCATTTTT 59.514 40.909 0.00 0.00 46.37 1.94
2343 2532 2.080693 TCGTGCGTATTCAGGCATTTT 58.919 42.857 0.00 0.00 46.37 1.82
2344 2533 1.665679 CTCGTGCGTATTCAGGCATTT 59.334 47.619 0.00 0.00 46.37 2.32
2345 2534 1.290203 CTCGTGCGTATTCAGGCATT 58.710 50.000 0.00 0.00 46.37 3.56
2346 2535 0.175760 ACTCGTGCGTATTCAGGCAT 59.824 50.000 0.00 0.00 46.37 4.40
2347 2536 0.735978 CACTCGTGCGTATTCAGGCA 60.736 55.000 0.00 0.00 42.97 4.75
2348 2537 1.999051 CACTCGTGCGTATTCAGGC 59.001 57.895 0.00 0.00 36.08 4.85
2367 2556 7.148052 CCCCTCTTCTATAAGATATGGTACACG 60.148 44.444 0.00 0.00 40.78 4.49
2389 2578 1.460882 GTTCTATACCCCCGCCCCT 60.461 63.158 0.00 0.00 0.00 4.79
2390 2579 2.523285 GGTTCTATACCCCCGCCCC 61.523 68.421 0.00 0.00 41.43 5.80
2391 2580 3.154787 GGTTCTATACCCCCGCCC 58.845 66.667 0.00 0.00 41.43 6.13
2443 2633 3.498018 TGTGGATTCTTGTCGATGTTGTG 59.502 43.478 0.00 0.00 0.00 3.33
2452 2642 5.140747 AGTGTAGAGTGTGGATTCTTGTC 57.859 43.478 0.00 0.00 0.00 3.18
2485 2675 2.586079 AGGCGCGAATGATCCACG 60.586 61.111 12.10 0.00 0.00 4.94
2506 2696 4.126437 TGTTTGAGATGTTGTCGATGTGT 58.874 39.130 0.00 0.00 0.00 3.72
2510 2700 3.363970 GCGTTGTTTGAGATGTTGTCGAT 60.364 43.478 0.00 0.00 0.00 3.59
2538 2728 2.478539 GCGCATTTGTTCAAGGGAGATC 60.479 50.000 0.30 0.00 0.00 2.75
2539 2729 1.474077 GCGCATTTGTTCAAGGGAGAT 59.526 47.619 0.30 0.00 0.00 2.75
2545 2735 1.010419 GGCAGGCGCATTTGTTCAAG 61.010 55.000 10.83 0.00 41.24 3.02
2564 2754 4.554363 CGAGGGTAGAGCGTGGCG 62.554 72.222 0.00 0.00 0.00 5.69
2587 2777 1.079336 GGTAGTTGTCACGAGGGCC 60.079 63.158 0.00 0.00 0.00 5.80
2588 2778 0.108756 GAGGTAGTTGTCACGAGGGC 60.109 60.000 0.00 0.00 0.00 5.19
2599 2789 4.158209 GCTTCTCCGTCTTTAGAGGTAGTT 59.842 45.833 0.00 0.00 0.00 2.24
2623 2813 3.449018 AGAATGCAGTAGTCTTCGATGGT 59.551 43.478 0.00 0.00 27.02 3.55
2714 2904 1.210155 GGTGCGTGACAAGAATGGC 59.790 57.895 0.00 0.00 34.00 4.40
2716 2906 2.414559 GGAATGGTGCGTGACAAGAATG 60.415 50.000 0.00 0.00 0.00 2.67
2717 2907 1.812571 GGAATGGTGCGTGACAAGAAT 59.187 47.619 0.00 0.00 0.00 2.40
2722 2912 2.422597 CTAAAGGAATGGTGCGTGACA 58.577 47.619 0.00 0.00 0.00 3.58
2728 2918 4.390264 GAGATACCCTAAAGGAATGGTGC 58.610 47.826 0.00 0.00 39.89 5.01
2821 3011 5.305569 TCGATCGTATTTTATTGACACGC 57.694 39.130 15.94 0.00 32.85 5.34
2823 3013 7.173863 ACCATCGATCGTATTTTATTGACAC 57.826 36.000 15.94 0.00 0.00 3.67
2832 3022 7.042335 AGAAGAAGAAACCATCGATCGTATTT 58.958 34.615 15.94 11.03 0.00 1.40
2896 3102 0.539986 AACAGGTGTTGGACGTCTGT 59.460 50.000 16.46 7.03 36.19 3.41
2931 3137 4.539870 CACTGCAATGTCGTTTCTTCAAT 58.460 39.130 0.00 0.00 0.00 2.57
2951 3157 1.205893 CACTGAAGTCTAGAGCCCCAC 59.794 57.143 0.00 0.00 0.00 4.61
2968 3174 2.017049 GCCAATAGCGGATTTCACACT 58.983 47.619 0.00 0.00 0.00 3.55
2969 3175 2.475200 GCCAATAGCGGATTTCACAC 57.525 50.000 0.00 0.00 0.00 3.82
2983 3189 4.444536 GCATATTTCCAACATGTGCCAAT 58.555 39.130 0.00 0.00 33.78 3.16
2991 3197 4.990526 CCTCTAGGGCATATTTCCAACAT 58.009 43.478 0.00 0.00 0.00 2.71
2992 3198 4.437682 CCTCTAGGGCATATTTCCAACA 57.562 45.455 0.00 0.00 0.00 3.33
3005 3211 9.981460 ATAATCCTTTTATTATTGCCTCTAGGG 57.019 33.333 0.00 0.00 29.60 3.53


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.