Multiple sequence alignment - TraesCS7B01G297900

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G297900 chr7B 100.000 4338 0 0 1 4338 535264326 535259989 0.000000e+00 8011.0
1 TraesCS7B01G297900 chr7B 95.798 119 4 1 4147 4264 523682086 523681968 1.590000e-44 191.0
2 TraesCS7B01G297900 chr7D 90.885 2622 151 40 970 3528 506726574 506723978 0.000000e+00 3437.0
3 TraesCS7B01G297900 chr7D 95.798 119 5 0 4147 4265 241737053 241737171 4.430000e-45 193.0
4 TraesCS7B01G297900 chr7D 81.119 143 10 5 3570 3712 506723826 506723701 9.930000e-17 99.0
5 TraesCS7B01G297900 chr7A 91.976 1807 71 10 883 2668 574131327 574129574 0.000000e+00 2466.0
6 TraesCS7B01G297900 chr7A 92.744 1392 55 9 2787 4154 574129331 574127962 0.000000e+00 1969.0
7 TraesCS7B01G297900 chr7A 78.465 469 58 24 4 459 574131815 574131377 2.570000e-67 267.0
8 TraesCS7B01G297900 chr7A 93.293 164 10 1 2625 2788 574129583 574129421 1.560000e-59 241.0
9 TraesCS7B01G297900 chr7A 97.531 81 2 0 4258 4338 574127963 574127883 5.850000e-29 139.0
10 TraesCS7B01G297900 chr6B 90.120 415 32 7 468 876 688289776 688289365 8.260000e-147 531.0
11 TraesCS7B01G297900 chr4A 89.336 422 39 6 461 876 609562776 609563197 3.840000e-145 525.0
12 TraesCS7B01G297900 chr4A 96.552 116 3 1 4148 4263 655433842 655433728 1.590000e-44 191.0
13 TraesCS7B01G297900 chr2A 89.639 415 35 6 468 876 158059621 158060033 4.970000e-144 521.0
14 TraesCS7B01G297900 chr2A 87.793 426 44 6 459 876 81020690 81020265 3.900000e-135 492.0
15 TraesCS7B01G297900 chr2B 89.234 418 35 8 468 877 754993579 754993164 8.320000e-142 514.0
16 TraesCS7B01G297900 chr2D 88.152 422 43 5 462 876 648170636 648171057 3.010000e-136 496.0
17 TraesCS7B01G297900 chr2D 88.000 425 40 9 461 877 2244694 2244273 3.900000e-135 492.0
18 TraesCS7B01G297900 chr4B 88.038 418 44 6 461 876 652763458 652763045 1.400000e-134 490.0
19 TraesCS7B01G297900 chr4B 78.519 270 34 14 7 258 359592967 359592704 5.810000e-34 156.0
20 TraesCS7B01G297900 chr5A 86.682 443 47 10 451 883 690785764 690786204 8.440000e-132 481.0
21 TraesCS7B01G297900 chr5A 83.978 181 23 4 13 191 301626694 301626518 7.460000e-38 169.0
22 TraesCS7B01G297900 chr5D 80.882 272 30 15 17 271 201905676 201905942 1.230000e-45 195.0
23 TraesCS7B01G297900 chr3B 96.522 115 4 0 4150 4264 70582105 70582219 1.590000e-44 191.0
24 TraesCS7B01G297900 chr3B 94.215 121 6 1 4151 4271 84898788 84898669 2.660000e-42 183.0
25 TraesCS7B01G297900 chr3B 93.548 124 6 2 4141 4263 627610741 627610619 2.660000e-42 183.0
26 TraesCS7B01G297900 chr3B 92.308 130 6 3 4148 4276 526281008 526281134 9.580000e-42 182.0
27 TraesCS7B01G297900 chr3B 92.126 127 10 0 4151 4277 809600284 809600410 3.450000e-41 180.0
28 TraesCS7B01G297900 chr5B 94.262 122 4 2 4149 4270 591554063 591553945 2.660000e-42 183.0
29 TraesCS7B01G297900 chr5B 79.044 272 35 14 17 271 212665234 212665500 2.680000e-37 167.0
30 TraesCS7B01G297900 chr1D 80.000 255 29 14 17 254 324421580 324421331 7.460000e-38 169.0
31 TraesCS7B01G297900 chr1D 84.127 63 9 1 378 440 172836109 172836170 4.680000e-05 60.2
32 TraesCS7B01G297900 chr4D 78.947 266 34 12 7 255 245680238 245680498 1.250000e-35 161.0
33 TraesCS7B01G297900 chr3D 84.663 163 20 3 19 180 308646074 308646232 1.610000e-34 158.0
34 TraesCS7B01G297900 chr3D 83.051 177 23 6 17 191 128267094 128266923 2.090000e-33 154.0
35 TraesCS7B01G297900 chr1B 92.982 57 4 0 384 440 575708894 575708950 2.780000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G297900 chr7B 535259989 535264326 4337 True 8011.0 8011 100.0000 1 4338 1 chr7B.!!$R2 4337
1 TraesCS7B01G297900 chr7D 506723701 506726574 2873 True 1768.0 3437 86.0020 970 3712 2 chr7D.!!$R1 2742
2 TraesCS7B01G297900 chr7A 574127883 574131815 3932 True 1016.4 2466 90.8018 4 4338 5 chr7A.!!$R1 4334

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
866 880 0.039035 ATACAGCCGGGCTCCAAAAA 59.961 50.0 20.97 1.12 36.4 1.94 F
1319 1362 0.038526 GGGAAGAGCGACGACTTGAA 60.039 55.0 11.30 0.00 0.0 2.69 F
1944 1993 0.659427 CATACATGGTCAAGCGGCTG 59.341 55.0 1.81 0.00 0.0 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2528 2609 0.535797 GGTTGTAGAACGAGGGGAGG 59.464 60.0 0.00 0.0 32.28 4.30 R
3248 3459 0.799534 GCGTTCACATCCATGCTTGC 60.800 55.0 0.00 0.0 0.00 4.01 R
3468 3679 0.258774 AGGAACCTGCAAGTGTTGGT 59.741 50.0 1.09 0.0 29.45 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 9.962783 ATCTAAACCTCGTACATGTCTTATTAC 57.037 33.333 0.00 0.00 0.00 1.89
75 77 8.034313 AGGATGGTTATGCATAGAAAACTAGA 57.966 34.615 6.50 0.00 0.00 2.43
84 86 7.977789 TGCATAGAAAACTAGAACATGTTGA 57.022 32.000 17.58 2.53 0.00 3.18
85 87 8.389779 TGCATAGAAAACTAGAACATGTTGAA 57.610 30.769 17.58 2.39 0.00 2.69
86 88 8.845227 TGCATAGAAAACTAGAACATGTTGAAA 58.155 29.630 17.58 0.00 0.00 2.69
87 89 9.846248 GCATAGAAAACTAGAACATGTTGAAAT 57.154 29.630 17.58 1.66 0.00 2.17
89 91 9.846248 ATAGAAAACTAGAACATGTTGAAATGC 57.154 29.630 17.58 0.00 0.00 3.56
90 92 6.857964 AGAAAACTAGAACATGTTGAAATGCG 59.142 34.615 17.58 0.00 0.00 4.73
91 93 5.689383 AACTAGAACATGTTGAAATGCGT 57.311 34.783 17.58 0.47 0.00 5.24
92 94 6.795098 AACTAGAACATGTTGAAATGCGTA 57.205 33.333 17.58 0.00 0.00 4.42
99 101 4.277174 ACATGTTGAAATGCGTAACCTTGA 59.723 37.500 0.00 0.00 0.00 3.02
100 102 5.048083 ACATGTTGAAATGCGTAACCTTGAT 60.048 36.000 0.00 0.00 0.00 2.57
106 108 9.221775 GTTGAAATGCGTAACCTTGATAATAAG 57.778 33.333 0.00 0.00 0.00 1.73
182 185 8.764524 AAGATAGACTTTGTAGTGCTTGTAAG 57.235 34.615 0.00 0.00 34.94 2.34
183 186 7.332182 AAGATAGACTTTGTAGTGCTTGTAAGC 59.668 37.037 9.59 9.59 43.29 3.09
231 235 0.888619 TGCTACGAGGAGACCACTTG 59.111 55.000 0.00 0.00 0.00 3.16
237 241 2.557490 ACGAGGAGACCACTTGAACTAC 59.443 50.000 0.00 0.00 0.00 2.73
238 242 2.820787 CGAGGAGACCACTTGAACTACT 59.179 50.000 0.00 0.00 0.00 2.57
239 243 3.256136 CGAGGAGACCACTTGAACTACTT 59.744 47.826 0.00 0.00 0.00 2.24
240 244 4.616373 CGAGGAGACCACTTGAACTACTTC 60.616 50.000 0.00 0.00 0.00 3.01
241 245 4.223953 AGGAGACCACTTGAACTACTTCA 58.776 43.478 0.00 0.00 34.39 3.02
242 246 4.039366 AGGAGACCACTTGAACTACTTCAC 59.961 45.833 0.00 0.00 36.06 3.18
243 247 4.202223 GGAGACCACTTGAACTACTTCACA 60.202 45.833 0.00 0.00 36.06 3.58
244 248 5.511545 GGAGACCACTTGAACTACTTCACAT 60.512 44.000 0.00 0.00 36.06 3.21
245 249 5.300752 AGACCACTTGAACTACTTCACATG 58.699 41.667 0.00 0.00 36.06 3.21
246 250 5.070446 AGACCACTTGAACTACTTCACATGA 59.930 40.000 0.00 0.00 36.06 3.07
258 262 8.237811 ACTACTTCACATGAATCTTTTTGGTT 57.762 30.769 0.00 0.00 33.01 3.67
271 275 7.951530 ATCTTTTTGGTTCAAATGCTTACAG 57.048 32.000 0.00 0.00 33.19 2.74
272 276 7.106439 TCTTTTTGGTTCAAATGCTTACAGA 57.894 32.000 0.00 0.00 33.19 3.41
273 277 6.978080 TCTTTTTGGTTCAAATGCTTACAGAC 59.022 34.615 0.00 0.00 33.19 3.51
274 278 4.846779 TTGGTTCAAATGCTTACAGACC 57.153 40.909 0.00 0.00 0.00 3.85
275 279 3.826524 TGGTTCAAATGCTTACAGACCA 58.173 40.909 0.00 0.00 0.00 4.02
276 280 3.568007 TGGTTCAAATGCTTACAGACCAC 59.432 43.478 0.00 0.00 0.00 4.16
277 281 3.057526 GGTTCAAATGCTTACAGACCACC 60.058 47.826 0.00 0.00 0.00 4.61
278 282 3.788227 TCAAATGCTTACAGACCACCT 57.212 42.857 0.00 0.00 0.00 4.00
280 284 3.072330 TCAAATGCTTACAGACCACCTGA 59.928 43.478 0.00 0.00 45.78 3.86
281 285 2.770164 ATGCTTACAGACCACCTGAC 57.230 50.000 0.00 0.00 45.78 3.51
282 286 1.419381 TGCTTACAGACCACCTGACA 58.581 50.000 0.00 0.00 45.78 3.58
288 292 0.469917 CAGACCACCTGACACTGGTT 59.530 55.000 2.22 0.00 45.78 3.67
292 296 0.758734 CCACCTGACACTGGTTCTCA 59.241 55.000 0.00 0.00 33.44 3.27
308 315 6.855836 TGGTTCTCACATTCTGCATTTATTC 58.144 36.000 0.00 0.00 0.00 1.75
311 318 7.417116 GGTTCTCACATTCTGCATTTATTCCAT 60.417 37.037 0.00 0.00 0.00 3.41
313 320 6.604396 TCTCACATTCTGCATTTATTCCATGT 59.396 34.615 0.00 0.00 0.00 3.21
321 328 4.044426 GCATTTATTCCATGTCTTTCGGC 58.956 43.478 0.00 0.00 0.00 5.54
324 331 1.086696 ATTCCATGTCTTTCGGCGTG 58.913 50.000 6.85 0.00 0.00 5.34
325 332 1.573829 TTCCATGTCTTTCGGCGTGC 61.574 55.000 6.85 0.00 0.00 5.34
326 333 2.096406 CATGTCTTTCGGCGTGCG 59.904 61.111 6.85 0.00 0.00 5.34
327 334 2.357034 ATGTCTTTCGGCGTGCGT 60.357 55.556 6.85 0.00 0.00 5.24
328 335 1.959226 ATGTCTTTCGGCGTGCGTT 60.959 52.632 6.85 0.00 0.00 4.84
329 336 1.503818 ATGTCTTTCGGCGTGCGTTT 61.504 50.000 6.85 0.00 0.00 3.60
330 337 0.875040 TGTCTTTCGGCGTGCGTTTA 60.875 50.000 6.85 0.00 0.00 2.01
331 338 0.179258 GTCTTTCGGCGTGCGTTTAG 60.179 55.000 6.85 0.00 0.00 1.85
333 340 0.450482 CTTTCGGCGTGCGTTTAGTG 60.450 55.000 6.85 0.00 0.00 2.74
335 342 0.875040 TTCGGCGTGCGTTTAGTGAA 60.875 50.000 6.85 0.00 0.00 3.18
345 357 2.407696 GCGTTTAGTGAAGAGACGTTCC 59.592 50.000 0.00 0.00 36.22 3.62
365 377 6.211515 GTTCCCGTCGACTATAAATGTGTAT 58.788 40.000 14.70 0.00 0.00 2.29
371 383 4.979815 TCGACTATAAATGTGTATGTGGCG 59.020 41.667 0.00 0.00 0.00 5.69
376 388 5.734855 ATAAATGTGTATGTGGCGACTTC 57.265 39.130 0.00 0.00 0.00 3.01
388 400 2.873288 GACTTCGTCGTACCGGCT 59.127 61.111 0.00 0.00 0.00 5.52
390 402 1.915614 GACTTCGTCGTACCGGCTCA 61.916 60.000 0.00 0.00 0.00 4.26
391 403 1.226323 CTTCGTCGTACCGGCTCAG 60.226 63.158 0.00 0.00 0.00 3.35
398 410 0.242825 CGTACCGGCTCAGTTTCTCA 59.757 55.000 0.00 0.00 0.00 3.27
399 411 1.732732 CGTACCGGCTCAGTTTCTCAG 60.733 57.143 0.00 0.00 0.00 3.35
402 414 0.108424 CCGGCTCAGTTTCTCAGAGG 60.108 60.000 0.00 0.00 31.57 3.69
409 421 2.036475 TCAGTTTCTCAGAGGTGCTCAC 59.964 50.000 0.00 0.00 32.06 3.51
414 426 1.897225 CTCAGAGGTGCTCACAGGGG 61.897 65.000 2.21 0.00 32.06 4.79
417 429 0.616111 AGAGGTGCTCACAGGGGTAG 60.616 60.000 2.21 0.00 32.06 3.18
419 431 2.670148 GGTGCTCACAGGGGTAGGG 61.670 68.421 2.21 0.00 0.00 3.53
424 436 1.192428 CTCACAGGGGTAGGGTGTAC 58.808 60.000 0.00 0.00 0.00 2.90
425 437 0.788383 TCACAGGGGTAGGGTGTACT 59.212 55.000 0.00 0.00 0.00 2.73
429 441 3.134081 CACAGGGGTAGGGTGTACTTATG 59.866 52.174 0.00 0.00 0.00 1.90
436 448 2.968675 AGGGTGTACTTATGTGCGTTC 58.031 47.619 0.00 0.00 0.00 3.95
443 455 6.237755 GGTGTACTTATGTGCGTTCATACTTC 60.238 42.308 0.00 0.00 31.19 3.01
453 467 7.712797 TGTGCGTTCATACTTCATAGAGATAA 58.287 34.615 0.00 0.00 0.00 1.75
468 482 9.797642 TCATAGAGATAAATGTATGCAAATGGT 57.202 29.630 0.00 0.00 0.00 3.55
470 484 9.797642 ATAGAGATAAATGTATGCAAATGGTCA 57.202 29.630 0.00 0.00 0.00 4.02
471 485 7.934457 AGAGATAAATGTATGCAAATGGTCAC 58.066 34.615 0.00 0.00 0.00 3.67
480 494 4.365514 TGCAAATGGTCACTTTAGAGGA 57.634 40.909 0.00 0.00 0.00 3.71
481 495 4.072131 TGCAAATGGTCACTTTAGAGGAC 58.928 43.478 0.00 0.00 0.00 3.85
482 496 3.125316 GCAAATGGTCACTTTAGAGGACG 59.875 47.826 0.00 0.00 32.39 4.79
484 498 1.263356 TGGTCACTTTAGAGGACGGG 58.737 55.000 0.00 0.00 32.39 5.28
485 499 1.264295 GGTCACTTTAGAGGACGGGT 58.736 55.000 0.00 0.00 32.39 5.28
486 500 2.225091 TGGTCACTTTAGAGGACGGGTA 60.225 50.000 0.00 0.00 32.39 3.69
487 501 2.165234 GGTCACTTTAGAGGACGGGTAC 59.835 54.545 0.00 0.00 32.39 3.34
488 502 2.821969 GTCACTTTAGAGGACGGGTACA 59.178 50.000 0.00 0.00 0.00 2.90
489 503 3.446516 GTCACTTTAGAGGACGGGTACAT 59.553 47.826 0.00 0.00 0.00 2.29
492 506 3.197116 ACTTTAGAGGACGGGTACATTGG 59.803 47.826 0.00 0.00 0.00 3.16
493 507 2.832643 TAGAGGACGGGTACATTGGA 57.167 50.000 0.00 0.00 0.00 3.53
494 508 1.486211 AGAGGACGGGTACATTGGAG 58.514 55.000 0.00 0.00 0.00 3.86
495 509 1.192428 GAGGACGGGTACATTGGAGT 58.808 55.000 0.00 0.00 0.00 3.85
496 510 2.024655 AGAGGACGGGTACATTGGAGTA 60.025 50.000 0.00 0.00 0.00 2.59
497 511 2.963782 GAGGACGGGTACATTGGAGTAT 59.036 50.000 0.00 0.00 0.00 2.12
498 512 4.141088 AGAGGACGGGTACATTGGAGTATA 60.141 45.833 0.00 0.00 0.00 1.47
499 513 4.748701 AGGACGGGTACATTGGAGTATAT 58.251 43.478 0.00 0.00 0.00 0.86
501 515 5.605488 AGGACGGGTACATTGGAGTATATTT 59.395 40.000 0.00 0.00 0.00 1.40
503 517 6.204108 GGACGGGTACATTGGAGTATATTTTG 59.796 42.308 0.00 0.00 0.00 2.44
504 518 6.891388 ACGGGTACATTGGAGTATATTTTGA 58.109 36.000 0.00 0.00 0.00 2.69
505 519 7.340256 ACGGGTACATTGGAGTATATTTTGAA 58.660 34.615 0.00 0.00 0.00 2.69
506 520 7.996644 ACGGGTACATTGGAGTATATTTTGAAT 59.003 33.333 0.00 0.00 0.00 2.57
507 521 9.496873 CGGGTACATTGGAGTATATTTTGAATA 57.503 33.333 0.00 0.00 0.00 1.75
524 538 9.628746 ATTTTGAATAATGCCAAAATGCTTTTC 57.371 25.926 10.95 0.00 45.65 2.29
525 539 7.982761 TTGAATAATGCCAAAATGCTTTTCT 57.017 28.000 0.00 0.00 31.83 2.52
526 540 7.367159 TGAATAATGCCAAAATGCTTTTCTG 57.633 32.000 0.00 0.43 31.83 3.02
527 541 7.160049 TGAATAATGCCAAAATGCTTTTCTGA 58.840 30.769 0.00 0.00 31.83 3.27
528 542 7.660617 TGAATAATGCCAAAATGCTTTTCTGAA 59.339 29.630 0.00 0.00 31.83 3.02
529 543 5.934935 AATGCCAAAATGCTTTTCTGAAG 57.065 34.783 0.00 0.00 0.00 3.02
530 544 4.405116 TGCCAAAATGCTTTTCTGAAGT 57.595 36.364 0.00 0.00 0.00 3.01
531 545 4.768583 TGCCAAAATGCTTTTCTGAAGTT 58.231 34.783 0.00 0.00 0.00 2.66
532 546 5.184711 TGCCAAAATGCTTTTCTGAAGTTT 58.815 33.333 0.00 0.00 0.00 2.66
533 547 5.294060 TGCCAAAATGCTTTTCTGAAGTTTC 59.706 36.000 0.00 0.00 0.00 2.78
534 548 5.294060 GCCAAAATGCTTTTCTGAAGTTTCA 59.706 36.000 0.00 0.00 35.57 2.69
535 549 6.183360 GCCAAAATGCTTTTCTGAAGTTTCAA 60.183 34.615 0.00 0.00 36.64 2.69
536 550 7.626028 GCCAAAATGCTTTTCTGAAGTTTCAAA 60.626 33.333 0.00 0.00 36.64 2.69
537 551 8.235905 CCAAAATGCTTTTCTGAAGTTTCAAAA 58.764 29.630 0.00 0.00 36.64 2.44
538 552 9.609950 CAAAATGCTTTTCTGAAGTTTCAAAAA 57.390 25.926 0.00 5.74 36.64 1.94
560 574 6.401955 AAATTCTGAAAACAAACCAACACG 57.598 33.333 0.00 0.00 0.00 4.49
561 575 4.506886 TTCTGAAAACAAACCAACACGT 57.493 36.364 0.00 0.00 0.00 4.49
562 576 4.506886 TCTGAAAACAAACCAACACGTT 57.493 36.364 0.00 0.00 0.00 3.99
563 577 4.872664 TCTGAAAACAAACCAACACGTTT 58.127 34.783 0.00 0.00 36.38 3.60
564 578 6.010294 TCTGAAAACAAACCAACACGTTTA 57.990 33.333 0.00 0.00 34.21 2.01
565 579 6.622549 TCTGAAAACAAACCAACACGTTTAT 58.377 32.000 0.00 0.00 34.21 1.40
566 580 7.759465 TCTGAAAACAAACCAACACGTTTATA 58.241 30.769 0.00 0.00 34.21 0.98
567 581 8.407064 TCTGAAAACAAACCAACACGTTTATAT 58.593 29.630 0.00 0.00 34.21 0.86
568 582 8.341477 TGAAAACAAACCAACACGTTTATATG 57.659 30.769 0.00 0.00 34.21 1.78
569 583 8.188799 TGAAAACAAACCAACACGTTTATATGA 58.811 29.630 0.00 0.00 34.21 2.15
570 584 8.928270 AAAACAAACCAACACGTTTATATGAA 57.072 26.923 0.00 0.00 34.21 2.57
571 585 9.535878 AAAACAAACCAACACGTTTATATGAAT 57.464 25.926 0.00 0.00 34.21 2.57
572 586 8.514136 AACAAACCAACACGTTTATATGAATG 57.486 30.769 0.00 0.00 34.21 2.67
573 587 7.653647 ACAAACCAACACGTTTATATGAATGT 58.346 30.769 0.00 0.00 34.21 2.71
574 588 8.784994 ACAAACCAACACGTTTATATGAATGTA 58.215 29.630 4.89 0.00 34.21 2.29
575 589 9.781834 CAAACCAACACGTTTATATGAATGTAT 57.218 29.630 4.89 0.00 34.21 2.29
600 614 4.735662 ACACATGTGCAAATTTTGATGC 57.264 36.364 25.68 0.00 42.86 3.91
601 615 4.382291 ACACATGTGCAAATTTTGATGCT 58.618 34.783 25.68 0.00 42.97 3.79
602 616 4.212425 ACACATGTGCAAATTTTGATGCTG 59.788 37.500 25.68 10.18 42.97 4.41
603 617 4.449405 CACATGTGCAAATTTTGATGCTGA 59.551 37.500 13.94 0.00 42.97 4.26
604 618 5.050023 CACATGTGCAAATTTTGATGCTGAA 60.050 36.000 13.94 0.00 42.97 3.02
605 619 5.527951 ACATGTGCAAATTTTGATGCTGAAA 59.472 32.000 13.26 0.00 42.97 2.69
606 620 6.205853 ACATGTGCAAATTTTGATGCTGAAAT 59.794 30.769 13.26 0.00 42.97 2.17
607 621 7.388224 ACATGTGCAAATTTTGATGCTGAAATA 59.612 29.630 13.26 0.00 42.97 1.40
608 622 7.725818 TGTGCAAATTTTGATGCTGAAATAA 57.274 28.000 13.26 0.00 42.97 1.40
609 623 7.798801 TGTGCAAATTTTGATGCTGAAATAAG 58.201 30.769 13.26 0.00 42.97 1.73
610 624 7.441760 TGTGCAAATTTTGATGCTGAAATAAGT 59.558 29.630 13.26 0.00 42.97 2.24
611 625 8.924691 GTGCAAATTTTGATGCTGAAATAAGTA 58.075 29.630 13.26 0.00 42.97 2.24
612 626 9.486497 TGCAAATTTTGATGCTGAAATAAGTAA 57.514 25.926 13.26 0.00 42.97 2.24
613 627 9.745323 GCAAATTTTGATGCTGAAATAAGTAAC 57.255 29.630 13.26 0.00 39.46 2.50
615 629 9.995003 AAATTTTGATGCTGAAATAAGTAACCA 57.005 25.926 0.00 0.00 0.00 3.67
617 631 8.984891 TTTTGATGCTGAAATAAGTAACCATG 57.015 30.769 0.00 0.00 0.00 3.66
618 632 7.701539 TTGATGCTGAAATAAGTAACCATGT 57.298 32.000 0.00 0.00 0.00 3.21
619 633 7.087409 TGATGCTGAAATAAGTAACCATGTG 57.913 36.000 0.00 0.00 0.00 3.21
620 634 6.883756 TGATGCTGAAATAAGTAACCATGTGA 59.116 34.615 0.00 0.00 0.00 3.58
621 635 6.741992 TGCTGAAATAAGTAACCATGTGAG 57.258 37.500 0.00 0.00 0.00 3.51
622 636 6.237901 TGCTGAAATAAGTAACCATGTGAGT 58.762 36.000 0.00 0.00 0.00 3.41
623 637 6.714810 TGCTGAAATAAGTAACCATGTGAGTT 59.285 34.615 0.00 0.00 0.00 3.01
624 638 7.880713 TGCTGAAATAAGTAACCATGTGAGTTA 59.119 33.333 0.00 0.00 0.00 2.24
625 639 8.175716 GCTGAAATAAGTAACCATGTGAGTTAC 58.824 37.037 12.83 12.83 46.45 2.50
659 673 9.781633 AGACAAATCATGATTTTGGAAAAATGA 57.218 25.926 27.30 2.00 38.84 2.57
702 716 9.897744 TCACTACTTGAAAATCATCATTTTGTC 57.102 29.630 0.00 0.00 41.47 3.18
703 717 9.681692 CACTACTTGAAAATCATCATTTTGTCA 57.318 29.630 0.00 0.00 41.47 3.58
719 733 9.624697 TCATTTTGTCATTTTTGTATAGCTCAC 57.375 29.630 0.00 0.00 0.00 3.51
720 734 9.409312 CATTTTGTCATTTTTGTATAGCTCACA 57.591 29.630 0.00 0.00 0.00 3.58
722 736 8.969121 TTTGTCATTTTTGTATAGCTCACATG 57.031 30.769 0.00 0.00 0.00 3.21
723 737 7.686438 TGTCATTTTTGTATAGCTCACATGT 57.314 32.000 0.00 0.00 0.00 3.21
724 738 8.109705 TGTCATTTTTGTATAGCTCACATGTT 57.890 30.769 0.00 0.00 0.00 2.71
725 739 8.575589 TGTCATTTTTGTATAGCTCACATGTTT 58.424 29.630 0.00 0.00 0.00 2.83
730 744 9.891828 TTTTTGTATAGCTCACATGTTTACTTG 57.108 29.630 0.00 0.00 0.00 3.16
731 745 8.615878 TTTGTATAGCTCACATGTTTACTTGT 57.384 30.769 0.00 0.00 35.02 3.16
732 746 8.615878 TTGTATAGCTCACATGTTTACTTGTT 57.384 30.769 0.00 0.00 32.76 2.83
733 747 8.615878 TGTATAGCTCACATGTTTACTTGTTT 57.384 30.769 0.00 0.00 32.76 2.83
734 748 8.717821 TGTATAGCTCACATGTTTACTTGTTTC 58.282 33.333 0.00 0.00 32.76 2.78
735 749 7.744087 ATAGCTCACATGTTTACTTGTTTCA 57.256 32.000 0.00 0.00 32.76 2.69
736 750 6.639632 AGCTCACATGTTTACTTGTTTCAT 57.360 33.333 0.00 0.00 32.76 2.57
737 751 6.672147 AGCTCACATGTTTACTTGTTTCATC 58.328 36.000 0.00 0.00 32.76 2.92
738 752 6.262944 AGCTCACATGTTTACTTGTTTCATCA 59.737 34.615 0.00 0.00 32.76 3.07
739 753 6.360681 GCTCACATGTTTACTTGTTTCATCAC 59.639 38.462 0.00 0.00 32.76 3.06
740 754 6.734137 TCACATGTTTACTTGTTTCATCACC 58.266 36.000 0.00 0.00 32.76 4.02
741 755 6.319911 TCACATGTTTACTTGTTTCATCACCA 59.680 34.615 0.00 0.00 32.76 4.17
742 756 6.977502 CACATGTTTACTTGTTTCATCACCAA 59.022 34.615 0.00 0.00 32.76 3.67
743 757 7.490725 CACATGTTTACTTGTTTCATCACCAAA 59.509 33.333 0.00 0.00 32.76 3.28
744 758 7.491048 ACATGTTTACTTGTTTCATCACCAAAC 59.509 33.333 0.00 0.00 34.79 2.93
745 759 7.164230 TGTTTACTTGTTTCATCACCAAACT 57.836 32.000 0.00 0.00 35.19 2.66
746 760 7.607250 TGTTTACTTGTTTCATCACCAAACTT 58.393 30.769 0.00 0.00 35.19 2.66
747 761 8.091449 TGTTTACTTGTTTCATCACCAAACTTT 58.909 29.630 0.00 0.00 35.19 2.66
748 762 9.575783 GTTTACTTGTTTCATCACCAAACTTTA 57.424 29.630 0.00 0.00 35.19 1.85
749 763 9.575783 TTTACTTGTTTCATCACCAAACTTTAC 57.424 29.630 0.00 0.00 35.19 2.01
750 764 7.164230 ACTTGTTTCATCACCAAACTTTACA 57.836 32.000 0.00 0.00 35.19 2.41
751 765 7.033185 ACTTGTTTCATCACCAAACTTTACAC 58.967 34.615 0.00 0.00 35.19 2.90
752 766 6.516739 TGTTTCATCACCAAACTTTACACA 57.483 33.333 0.00 0.00 35.19 3.72
753 767 7.106439 TGTTTCATCACCAAACTTTACACAT 57.894 32.000 0.00 0.00 35.19 3.21
754 768 6.977502 TGTTTCATCACCAAACTTTACACATG 59.022 34.615 0.00 0.00 35.19 3.21
755 769 6.707440 TTCATCACCAAACTTTACACATGT 57.293 33.333 0.00 0.00 0.00 3.21
756 770 6.070897 TCATCACCAAACTTTACACATGTG 57.929 37.500 24.25 24.25 0.00 3.21
757 771 5.592282 TCATCACCAAACTTTACACATGTGT 59.408 36.000 32.47 32.47 46.87 3.72
758 772 6.768381 TCATCACCAAACTTTACACATGTGTA 59.232 34.615 30.31 30.31 44.42 2.90
774 788 9.797642 ACACATGTGTAATAACATCCATATGAT 57.202 29.630 29.66 0.00 42.90 2.45
778 792 9.676861 ATGTGTAATAACATCCATATGATCAGG 57.323 33.333 3.65 0.00 35.92 3.86
779 793 8.659527 TGTGTAATAACATCCATATGATCAGGT 58.340 33.333 3.65 0.00 38.08 4.00
795 809 8.980481 ATGATCAGGTAGAATTATTTTCGGTT 57.020 30.769 0.09 0.00 0.00 4.44
796 810 8.801882 TGATCAGGTAGAATTATTTTCGGTTT 57.198 30.769 0.00 0.00 0.00 3.27
797 811 9.238368 TGATCAGGTAGAATTATTTTCGGTTTT 57.762 29.630 0.00 0.00 0.00 2.43
853 867 7.781548 TTAAAATAAAGTCCTCCGATACAGC 57.218 36.000 0.00 0.00 0.00 4.40
854 868 4.338379 AATAAAGTCCTCCGATACAGCC 57.662 45.455 0.00 0.00 0.00 4.85
855 869 0.460311 AAAGTCCTCCGATACAGCCG 59.540 55.000 0.00 0.00 0.00 5.52
857 871 2.520982 TCCTCCGATACAGCCGGG 60.521 66.667 2.18 0.00 46.47 5.73
858 872 4.301027 CCTCCGATACAGCCGGGC 62.301 72.222 12.11 12.11 46.47 6.13
859 873 3.227276 CTCCGATACAGCCGGGCT 61.227 66.667 17.69 17.69 46.47 5.19
860 874 3.214250 CTCCGATACAGCCGGGCTC 62.214 68.421 20.97 7.29 46.47 4.70
861 875 4.301027 CCGATACAGCCGGGCTCC 62.301 72.222 20.97 7.82 43.05 4.70
862 876 3.536917 CGATACAGCCGGGCTCCA 61.537 66.667 20.97 10.27 36.40 3.86
863 877 2.908015 GATACAGCCGGGCTCCAA 59.092 61.111 20.97 7.81 36.40 3.53
864 878 1.223487 GATACAGCCGGGCTCCAAA 59.777 57.895 20.97 5.02 36.40 3.28
865 879 0.393808 GATACAGCCGGGCTCCAAAA 60.394 55.000 20.97 3.05 36.40 2.44
866 880 0.039035 ATACAGCCGGGCTCCAAAAA 59.961 50.000 20.97 1.12 36.40 1.94
867 881 0.039035 TACAGCCGGGCTCCAAAAAT 59.961 50.000 20.97 1.35 36.40 1.82
868 882 1.250840 ACAGCCGGGCTCCAAAAATC 61.251 55.000 20.97 0.00 36.40 2.17
869 883 1.682344 AGCCGGGCTCCAAAAATCC 60.682 57.895 17.69 0.00 30.62 3.01
870 884 1.981853 GCCGGGCTCCAAAAATCCA 60.982 57.895 12.87 0.00 0.00 3.41
871 885 1.890174 CCGGGCTCCAAAAATCCAC 59.110 57.895 0.00 0.00 0.00 4.02
872 886 0.611896 CCGGGCTCCAAAAATCCACT 60.612 55.000 0.00 0.00 0.00 4.00
873 887 0.811281 CGGGCTCCAAAAATCCACTC 59.189 55.000 0.00 0.00 0.00 3.51
874 888 1.614317 CGGGCTCCAAAAATCCACTCT 60.614 52.381 0.00 0.00 0.00 3.24
875 889 2.095461 GGGCTCCAAAAATCCACTCTC 58.905 52.381 0.00 0.00 0.00 3.20
876 890 1.740025 GGCTCCAAAAATCCACTCTCG 59.260 52.381 0.00 0.00 0.00 4.04
877 891 2.427506 GCTCCAAAAATCCACTCTCGT 58.572 47.619 0.00 0.00 0.00 4.18
878 892 3.596214 GCTCCAAAAATCCACTCTCGTA 58.404 45.455 0.00 0.00 0.00 3.43
879 893 4.000988 GCTCCAAAAATCCACTCTCGTAA 58.999 43.478 0.00 0.00 0.00 3.18
880 894 4.636206 GCTCCAAAAATCCACTCTCGTAAT 59.364 41.667 0.00 0.00 0.00 1.89
881 895 5.447818 GCTCCAAAAATCCACTCTCGTAATG 60.448 44.000 0.00 0.00 0.00 1.90
919 934 8.628630 AGATGATTCTATGAGACGACTGATAA 57.371 34.615 0.00 0.00 0.00 1.75
942 957 1.676006 GGCCCAATTACCGTTGATGAG 59.324 52.381 0.00 0.00 0.00 2.90
974 989 3.678806 GCAGATACAACCAGATCAACGGA 60.679 47.826 0.00 0.00 0.00 4.69
1004 1023 2.214376 TCTCCGCATTCCCAAATGTT 57.786 45.000 0.63 0.00 43.54 2.71
1251 1294 3.731216 CGCTACGAATGGAGTGAACTATG 59.269 47.826 0.00 0.00 0.00 2.23
1262 1305 3.861840 AGTGAACTATGTCGGATTGGTG 58.138 45.455 0.00 0.00 0.00 4.17
1272 1315 1.191535 CGGATTGGTGTCCTCAGGTA 58.808 55.000 0.00 0.00 36.07 3.08
1306 1349 0.324943 CAAGAGGAAAGCGGGGAAGA 59.675 55.000 0.00 0.00 0.00 2.87
1316 1359 2.971452 GGGGAAGAGCGACGACTT 59.029 61.111 0.00 3.00 0.00 3.01
1317 1360 1.446272 GGGGAAGAGCGACGACTTG 60.446 63.158 11.30 0.00 0.00 3.16
1319 1362 0.038526 GGGAAGAGCGACGACTTGAA 60.039 55.000 11.30 0.00 0.00 2.69
1325 1368 2.033194 GCGACGACTTGAAAGGGGG 61.033 63.158 0.00 0.00 0.00 5.40
1374 1417 0.760567 AGCATGCCGAGGTGAGGATA 60.761 55.000 15.66 0.00 0.00 2.59
1423 1466 5.316167 TCAGTAGGTTTTAGTGGTCTCGTA 58.684 41.667 0.00 0.00 0.00 3.43
1501 1544 4.815269 AGCATTGACTCTAGTCTTCACAC 58.185 43.478 11.22 0.00 44.99 3.82
1504 1547 6.379703 AGCATTGACTCTAGTCTTCACACTAT 59.620 38.462 11.22 0.00 44.99 2.12
1548 1591 4.565166 CGATTTGTCATGACCGCTTAACTA 59.435 41.667 22.85 0.00 0.00 2.24
1553 1596 7.477144 TTGTCATGACCGCTTAACTATATTG 57.523 36.000 22.85 0.00 0.00 1.90
1614 1662 4.142403 CCATTGCTAATTCCGCTTCTTTCA 60.142 41.667 1.96 0.00 0.00 2.69
1640 1688 9.561069 AGAAGAGCAAAATTACTGTCTCTTTTA 57.439 29.630 17.90 0.00 37.38 1.52
1668 1717 4.702131 GCTAAGATGTGTGGTTTCATCCTT 59.298 41.667 0.00 0.00 40.63 3.36
1755 1804 9.733556 AGGTATGTTTGTTACTACATTTCATCA 57.266 29.630 8.44 0.00 36.46 3.07
1894 1943 9.383519 CTTGGCTTATCTGTCTTTATTCTTGTA 57.616 33.333 0.00 0.00 0.00 2.41
1944 1993 0.659427 CATACATGGTCAAGCGGCTG 59.341 55.000 1.81 0.00 0.00 4.85
1968 2017 4.453819 GCTTGCATGGTTATATCAGGAGAC 59.546 45.833 1.34 0.00 0.00 3.36
2035 2084 5.046159 CACCAGGGTACACTTATTGAGGTAA 60.046 44.000 0.00 0.00 0.00 2.85
2159 2240 6.660521 TCATAGCATTCACATGTTTCTTTCCT 59.339 34.615 0.00 0.00 32.28 3.36
2202 2283 6.431234 GGTCCTGACATGGATATAATTGGAAC 59.569 42.308 0.00 0.00 38.52 3.62
2351 2432 8.877864 TGGACTTATTACAACCTCATTTTCAT 57.122 30.769 0.00 0.00 0.00 2.57
2423 2504 5.779806 ATGTACTTGCAAGAATACGTGTC 57.220 39.130 32.50 11.19 0.00 3.67
2493 2574 0.665835 CTCAGCAGTAGCCTCGGTAG 59.334 60.000 0.00 0.00 43.56 3.18
2528 2609 7.470079 CATCAGTTGGCAATGCTGTATATATC 58.530 38.462 15.06 0.00 0.00 1.63
2605 2687 5.500546 ACGGGAAAGGGGAGATTAATATC 57.499 43.478 1.26 1.26 0.00 1.63
2676 2792 4.725790 AGATTTAACTGCTGCATTTCCC 57.274 40.909 8.59 0.00 0.00 3.97
2686 2802 2.754552 GCTGCATTTCCCTGTGACATAA 59.245 45.455 0.00 0.00 0.00 1.90
2952 3159 7.658179 TTTCATCCTATAATAAAGCAGCGAG 57.342 36.000 0.00 0.00 0.00 5.03
2963 3170 4.733972 AAAGCAGCGAGTTTTCTACTTC 57.266 40.909 0.00 0.00 37.17 3.01
2964 3171 3.669251 AGCAGCGAGTTTTCTACTTCT 57.331 42.857 0.00 0.00 37.17 2.85
2966 3173 3.743396 AGCAGCGAGTTTTCTACTTCTTG 59.257 43.478 0.00 0.00 37.17 3.02
2968 3175 3.067833 AGCGAGTTTTCTACTTCTTGGC 58.932 45.455 0.00 0.00 37.17 4.52
2969 3176 3.067833 GCGAGTTTTCTACTTCTTGGCT 58.932 45.455 0.00 0.00 37.17 4.75
2970 3177 3.123790 GCGAGTTTTCTACTTCTTGGCTC 59.876 47.826 0.00 0.00 37.17 4.70
2971 3178 4.561105 CGAGTTTTCTACTTCTTGGCTCT 58.439 43.478 0.00 0.00 37.17 4.09
2972 3179 4.623595 CGAGTTTTCTACTTCTTGGCTCTC 59.376 45.833 0.00 0.00 37.17 3.20
2973 3180 4.561105 AGTTTTCTACTTCTTGGCTCTCG 58.439 43.478 0.00 0.00 31.29 4.04
3065 3273 5.079643 ACTCACATAGTTTGGCTGGAAAAT 58.920 37.500 0.00 0.00 33.35 1.82
3123 3331 5.008980 ACGAAGGTATAGATAGGTGTAGCC 58.991 45.833 0.00 0.00 37.58 3.93
3232 3443 1.134965 GTCATAGGTGAAGAGCTGCGT 60.135 52.381 0.00 0.00 35.80 5.24
3248 3459 3.120752 GCTGCGTATCTGCTACATTGATG 60.121 47.826 0.00 0.00 36.79 3.07
3346 3557 7.001073 GCTTATCTGGGGACTAAAATTCATCT 58.999 38.462 0.00 0.00 0.00 2.90
3370 3581 0.395724 CCTTAATGGCCGCTTCCCTT 60.396 55.000 0.00 0.00 0.00 3.95
3378 3589 2.664851 CGCTTCCCTTGACGTGCA 60.665 61.111 0.00 0.00 0.00 4.57
3395 3606 1.814394 TGCATGACATCAGTTTCTGCC 59.186 47.619 0.00 0.00 0.00 4.85
3507 3718 1.852309 TGTGTCAAGATATGCCCCCAT 59.148 47.619 0.00 0.00 35.44 4.00
3563 3843 3.007635 AGACAGTTTTATAGGTTGCCGC 58.992 45.455 0.00 0.00 0.00 6.53
3616 3937 8.635765 ACATTGTAAGATCATTAGGTGTTTGT 57.364 30.769 0.00 0.00 0.00 2.83
3617 3938 9.077885 ACATTGTAAGATCATTAGGTGTTTGTT 57.922 29.630 0.00 0.00 0.00 2.83
3618 3939 9.912634 CATTGTAAGATCATTAGGTGTTTGTTT 57.087 29.630 0.00 0.00 0.00 2.83
3623 3944 8.986477 AAGATCATTAGGTGTTTGTTTAATGC 57.014 30.769 0.00 0.00 34.86 3.56
3624 3945 7.547227 AGATCATTAGGTGTTTGTTTAATGCC 58.453 34.615 0.00 0.00 34.86 4.40
3625 3946 6.656632 TCATTAGGTGTTTGTTTAATGCCA 57.343 33.333 0.00 0.00 34.86 4.92
3626 3947 7.238486 TCATTAGGTGTTTGTTTAATGCCAT 57.762 32.000 0.00 0.00 34.86 4.40
3627 3948 7.095910 TCATTAGGTGTTTGTTTAATGCCATG 58.904 34.615 0.00 0.00 34.86 3.66
3628 3949 4.953940 AGGTGTTTGTTTAATGCCATGT 57.046 36.364 0.00 0.00 0.00 3.21
3629 3950 5.289083 AGGTGTTTGTTTAATGCCATGTT 57.711 34.783 0.00 0.00 0.00 2.71
3630 3951 5.296748 AGGTGTTTGTTTAATGCCATGTTC 58.703 37.500 0.00 0.00 0.00 3.18
3658 3979 4.669206 TGCCATTGTTGAAGTTTCACAT 57.331 36.364 0.00 0.00 36.83 3.21
3691 4012 8.876790 TCAATCTTTGATGCATTCGCTATATAG 58.123 33.333 0.00 5.30 35.08 1.31
3692 4013 8.876790 CAATCTTTGATGCATTCGCTATATAGA 58.123 33.333 14.16 0.00 39.64 1.98
3743 4064 5.371115 TTTTGAAAGGAAAGCTACCATCG 57.629 39.130 11.59 0.00 0.00 3.84
3747 4068 2.693267 AGGAAAGCTACCATCGGTTC 57.307 50.000 11.59 0.00 37.09 3.62
3751 4072 3.127030 GGAAAGCTACCATCGGTTCTTTG 59.873 47.826 14.05 0.00 37.39 2.77
3775 4096 6.073602 TGTGAAAGAAATCTGTCTTCACATCG 60.074 38.462 18.39 0.00 38.84 3.84
3802 4123 8.970020 TCATTTCTTATGCAGGTTAAACATGAT 58.030 29.630 0.00 0.00 30.30 2.45
3815 4136 8.739972 AGGTTAAACATGATAATTGAACCTGTC 58.260 33.333 12.66 0.00 42.88 3.51
3971 4292 6.436847 TCAATCAGTATCCTTCCAATTTGCAA 59.563 34.615 0.00 0.00 0.00 4.08
4041 4362 9.953565 ATCAGTTGATGAATGGAATTGATTTTT 57.046 25.926 0.00 0.00 42.53 1.94
4042 4363 9.210329 TCAGTTGATGAATGGAATTGATTTTTG 57.790 29.630 0.00 0.00 36.07 2.44
4099 4420 5.701224 ACTTTTAGAGTTTCATTGACCCCA 58.299 37.500 0.00 0.00 33.92 4.96
4151 4472 4.814234 CCGCCTGCACATTTTCTAGTTATA 59.186 41.667 0.00 0.00 0.00 0.98
4152 4473 5.277345 CCGCCTGCACATTTTCTAGTTATAC 60.277 44.000 0.00 0.00 0.00 1.47
4153 4474 5.523916 CGCCTGCACATTTTCTAGTTATACT 59.476 40.000 0.00 0.00 0.00 2.12
4154 4475 6.292381 CGCCTGCACATTTTCTAGTTATACTC 60.292 42.308 0.00 0.00 0.00 2.59
4155 4476 6.017852 GCCTGCACATTTTCTAGTTATACTCC 60.018 42.308 0.00 0.00 0.00 3.85
4156 4477 6.483640 CCTGCACATTTTCTAGTTATACTCCC 59.516 42.308 0.00 0.00 0.00 4.30
4157 4478 7.195374 TGCACATTTTCTAGTTATACTCCCT 57.805 36.000 0.00 0.00 0.00 4.20
4158 4479 7.272978 TGCACATTTTCTAGTTATACTCCCTC 58.727 38.462 0.00 0.00 0.00 4.30
4159 4480 6.706716 GCACATTTTCTAGTTATACTCCCTCC 59.293 42.308 0.00 0.00 0.00 4.30
4160 4481 6.924060 CACATTTTCTAGTTATACTCCCTCCG 59.076 42.308 0.00 0.00 0.00 4.63
4161 4482 6.610425 ACATTTTCTAGTTATACTCCCTCCGT 59.390 38.462 0.00 0.00 0.00 4.69
4162 4483 7.125356 ACATTTTCTAGTTATACTCCCTCCGTT 59.875 37.037 0.00 0.00 0.00 4.44
4163 4484 6.705863 TTTCTAGTTATACTCCCTCCGTTC 57.294 41.667 0.00 0.00 0.00 3.95
4164 4485 4.384056 TCTAGTTATACTCCCTCCGTTCG 58.616 47.826 0.00 0.00 0.00 3.95
4165 4486 2.305009 AGTTATACTCCCTCCGTTCGG 58.695 52.381 4.74 4.74 0.00 4.30
4166 4487 2.092212 AGTTATACTCCCTCCGTTCGGA 60.092 50.000 13.34 13.34 0.00 4.55
4167 4488 2.689983 GTTATACTCCCTCCGTTCGGAA 59.310 50.000 14.79 0.00 33.41 4.30
4168 4489 2.083628 ATACTCCCTCCGTTCGGAAT 57.916 50.000 14.79 2.14 33.41 3.01
4169 4490 1.856629 TACTCCCTCCGTTCGGAATT 58.143 50.000 14.79 0.00 33.41 2.17
4170 4491 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
4171 4492 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
4172 4493 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
4173 4494 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
4174 4495 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
4175 4496 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
4176 4497 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
4177 4498 3.368116 CCTCCGTTCGGAATTACTTGTCT 60.368 47.826 14.79 0.00 33.41 3.41
4178 4499 3.841643 TCCGTTCGGAATTACTTGTCTC 58.158 45.455 11.66 0.00 0.00 3.36
4179 4500 2.597305 CCGTTCGGAATTACTTGTCTCG 59.403 50.000 5.19 0.00 0.00 4.04
4180 4501 2.597305 CGTTCGGAATTACTTGTCTCGG 59.403 50.000 0.00 0.00 0.00 4.63
4181 4502 3.671433 CGTTCGGAATTACTTGTCTCGGA 60.671 47.826 0.00 0.00 0.00 4.55
4182 4503 4.240096 GTTCGGAATTACTTGTCTCGGAA 58.760 43.478 0.00 0.00 0.00 4.30
4183 4504 4.524316 TCGGAATTACTTGTCTCGGAAA 57.476 40.909 0.00 0.00 0.00 3.13
4184 4505 5.080969 TCGGAATTACTTGTCTCGGAAAT 57.919 39.130 0.00 0.00 0.00 2.17
4185 4506 4.868171 TCGGAATTACTTGTCTCGGAAATG 59.132 41.667 0.00 0.00 0.00 2.32
4186 4507 4.034048 CGGAATTACTTGTCTCGGAAATGG 59.966 45.833 0.00 0.00 0.00 3.16
4187 4508 5.183228 GGAATTACTTGTCTCGGAAATGGA 58.817 41.667 0.00 0.00 0.00 3.41
4188 4509 5.823045 GGAATTACTTGTCTCGGAAATGGAT 59.177 40.000 0.00 0.00 0.00 3.41
4189 4510 6.238484 GGAATTACTTGTCTCGGAAATGGATG 60.238 42.308 0.00 0.00 0.00 3.51
4190 4511 3.703001 ACTTGTCTCGGAAATGGATGT 57.297 42.857 0.00 0.00 0.00 3.06
4191 4512 3.338249 ACTTGTCTCGGAAATGGATGTG 58.662 45.455 0.00 0.00 0.00 3.21
4192 4513 3.244561 ACTTGTCTCGGAAATGGATGTGT 60.245 43.478 0.00 0.00 0.00 3.72
4193 4514 2.972625 TGTCTCGGAAATGGATGTGTC 58.027 47.619 0.00 0.00 0.00 3.67
4194 4515 2.567169 TGTCTCGGAAATGGATGTGTCT 59.433 45.455 0.00 0.00 0.00 3.41
4195 4516 3.767131 TGTCTCGGAAATGGATGTGTCTA 59.233 43.478 0.00 0.00 0.00 2.59
4196 4517 4.142160 TGTCTCGGAAATGGATGTGTCTAG 60.142 45.833 0.00 0.00 0.00 2.43
4197 4518 4.098044 GTCTCGGAAATGGATGTGTCTAGA 59.902 45.833 0.00 0.00 0.00 2.43
4198 4519 4.709886 TCTCGGAAATGGATGTGTCTAGAA 59.290 41.667 0.00 0.00 0.00 2.10
4199 4520 4.755411 TCGGAAATGGATGTGTCTAGAAC 58.245 43.478 0.00 0.00 0.00 3.01
4200 4521 4.466370 TCGGAAATGGATGTGTCTAGAACT 59.534 41.667 0.00 0.00 0.00 3.01
4201 4522 5.655090 TCGGAAATGGATGTGTCTAGAACTA 59.345 40.000 0.00 0.00 0.00 2.24
4202 4523 6.153851 TCGGAAATGGATGTGTCTAGAACTAA 59.846 38.462 0.00 0.00 0.00 2.24
4203 4524 6.816640 CGGAAATGGATGTGTCTAGAACTAAA 59.183 38.462 0.00 0.00 0.00 1.85
4204 4525 7.333423 CGGAAATGGATGTGTCTAGAACTAAAA 59.667 37.037 0.00 0.00 0.00 1.52
4205 4526 9.178758 GGAAATGGATGTGTCTAGAACTAAAAT 57.821 33.333 0.00 0.00 0.00 1.82
4210 4531 9.871238 TGGATGTGTCTAGAACTAAAATAAGTC 57.129 33.333 0.00 0.00 0.00 3.01
4230 4551 6.851222 AGTCTAGATACATCCATTTTTGCG 57.149 37.500 0.00 0.00 0.00 4.85
4231 4552 6.582636 AGTCTAGATACATCCATTTTTGCGA 58.417 36.000 0.00 0.00 0.00 5.10
4232 4553 6.480320 AGTCTAGATACATCCATTTTTGCGAC 59.520 38.462 0.00 0.00 0.00 5.19
4233 4554 6.257849 GTCTAGATACATCCATTTTTGCGACA 59.742 38.462 0.00 0.00 0.00 4.35
4234 4555 5.895636 AGATACATCCATTTTTGCGACAA 57.104 34.783 0.00 0.00 0.00 3.18
4235 4556 5.883661 AGATACATCCATTTTTGCGACAAG 58.116 37.500 0.00 0.00 0.00 3.16
4236 4557 5.415701 AGATACATCCATTTTTGCGACAAGT 59.584 36.000 0.00 0.00 0.00 3.16
4237 4558 6.597672 AGATACATCCATTTTTGCGACAAGTA 59.402 34.615 0.00 0.00 0.00 2.24
4238 4559 5.446143 ACATCCATTTTTGCGACAAGTAA 57.554 34.783 0.00 0.00 0.00 2.24
4239 4560 6.024552 ACATCCATTTTTGCGACAAGTAAT 57.975 33.333 0.00 0.00 0.00 1.89
4240 4561 6.454795 ACATCCATTTTTGCGACAAGTAATT 58.545 32.000 0.00 0.00 0.00 1.40
4241 4562 6.586082 ACATCCATTTTTGCGACAAGTAATTC 59.414 34.615 0.00 0.00 0.00 2.17
4242 4563 5.465935 TCCATTTTTGCGACAAGTAATTCC 58.534 37.500 0.00 0.00 0.00 3.01
4243 4564 4.323336 CCATTTTTGCGACAAGTAATTCCG 59.677 41.667 0.00 0.00 0.00 4.30
4244 4565 4.815040 TTTTTGCGACAAGTAATTCCGA 57.185 36.364 0.00 0.00 0.00 4.55
4245 4566 4.815040 TTTTGCGACAAGTAATTCCGAA 57.185 36.364 0.00 0.00 0.00 4.30
4246 4567 3.799137 TTGCGACAAGTAATTCCGAAC 57.201 42.857 0.00 0.00 0.00 3.95
4247 4568 1.722464 TGCGACAAGTAATTCCGAACG 59.278 47.619 0.00 0.00 0.00 3.95
4248 4569 1.060122 GCGACAAGTAATTCCGAACGG 59.940 52.381 6.94 6.94 0.00 4.44
4249 4570 2.598589 CGACAAGTAATTCCGAACGGA 58.401 47.619 12.04 12.04 43.52 4.69
4250 4571 2.597305 CGACAAGTAATTCCGAACGGAG 59.403 50.000 15.34 5.60 46.06 4.63
4251 4572 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
4252 4573 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
4253 4574 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
4254 4575 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
4255 4576 1.479730 GTAATTCCGAACGGAGGGAGT 59.520 52.381 15.34 4.12 46.06 3.85
4256 4577 1.856629 AATTCCGAACGGAGGGAGTA 58.143 50.000 15.34 1.05 46.06 2.59
4263 4584 3.012518 CGAACGGAGGGAGTACTTTCTA 58.987 50.000 0.00 0.00 0.00 2.10
4305 4626 0.398522 AGGATGTCCGGCTCATACCA 60.399 55.000 15.02 0.00 42.08 3.25
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 8.959548 TGTAATAAGACATGTACGAGGTTTAGA 58.040 33.333 0.00 0.00 0.00 2.10
13 14 9.577110 TTGTAATAAGACATGTACGAGGTTTAG 57.423 33.333 0.00 0.00 0.00 1.85
14 15 9.926158 TTTGTAATAAGACATGTACGAGGTTTA 57.074 29.630 0.00 0.00 0.00 2.01
15 16 8.836268 TTTGTAATAAGACATGTACGAGGTTT 57.164 30.769 0.00 0.00 0.00 3.27
16 17 8.836268 TTTTGTAATAAGACATGTACGAGGTT 57.164 30.769 0.00 0.00 0.00 3.50
75 77 4.846779 AGGTTACGCATTTCAACATGTT 57.153 36.364 4.92 4.92 0.00 2.71
84 86 7.568199 AGCTTATTATCAAGGTTACGCATTT 57.432 32.000 0.00 0.00 32.46 2.32
85 87 8.671384 TTAGCTTATTATCAAGGTTACGCATT 57.329 30.769 0.00 0.00 37.44 3.56
86 88 8.848474 ATTAGCTTATTATCAAGGTTACGCAT 57.152 30.769 0.00 0.00 37.44 4.73
87 89 7.929245 TGATTAGCTTATTATCAAGGTTACGCA 59.071 33.333 0.00 0.00 37.44 5.24
88 90 8.306680 TGATTAGCTTATTATCAAGGTTACGC 57.693 34.615 0.00 0.00 37.44 4.42
192 195 6.959639 AGCATTGATATTTTCACGGGTAAT 57.040 33.333 0.00 0.00 32.84 1.89
195 198 4.272504 CGTAGCATTGATATTTTCACGGGT 59.727 41.667 0.00 0.00 32.84 5.28
198 201 5.462068 TCCTCGTAGCATTGATATTTTCACG 59.538 40.000 0.00 0.00 32.84 4.35
199 202 6.701841 TCTCCTCGTAGCATTGATATTTTCAC 59.298 38.462 0.00 0.00 32.84 3.18
231 235 8.352942 ACCAAAAAGATTCATGTGAAGTAGTTC 58.647 33.333 3.15 3.15 37.48 3.01
237 241 8.422973 TTTGAACCAAAAAGATTCATGTGAAG 57.577 30.769 1.65 0.00 32.24 3.02
238 242 8.828644 CATTTGAACCAAAAAGATTCATGTGAA 58.171 29.630 0.00 0.00 36.90 3.18
239 243 7.041916 GCATTTGAACCAAAAAGATTCATGTGA 60.042 33.333 0.00 0.00 36.90 3.58
240 244 7.041644 AGCATTTGAACCAAAAAGATTCATGTG 60.042 33.333 0.00 0.00 36.90 3.21
241 245 6.993902 AGCATTTGAACCAAAAAGATTCATGT 59.006 30.769 0.00 0.00 36.90 3.21
242 246 7.429636 AGCATTTGAACCAAAAAGATTCATG 57.570 32.000 0.00 0.00 36.90 3.07
243 247 8.992073 GTAAGCATTTGAACCAAAAAGATTCAT 58.008 29.630 0.00 0.00 36.90 2.57
244 248 7.984050 TGTAAGCATTTGAACCAAAAAGATTCA 59.016 29.630 0.00 0.00 36.90 2.57
245 249 8.364129 TGTAAGCATTTGAACCAAAAAGATTC 57.636 30.769 0.00 0.00 36.90 2.52
246 250 8.203485 TCTGTAAGCATTTGAACCAAAAAGATT 58.797 29.630 0.00 0.00 36.90 2.40
258 262 3.072330 TCAGGTGGTCTGTAAGCATTTGA 59.928 43.478 0.00 0.00 43.76 2.69
271 275 0.759346 AGAACCAGTGTCAGGTGGTC 59.241 55.000 7.18 2.78 46.82 4.02
273 277 0.758734 TGAGAACCAGTGTCAGGTGG 59.241 55.000 0.27 0.27 39.86 4.61
274 278 1.138859 TGTGAGAACCAGTGTCAGGTG 59.861 52.381 0.00 0.00 39.86 4.00
275 279 1.496060 TGTGAGAACCAGTGTCAGGT 58.504 50.000 0.00 0.00 42.34 4.00
276 280 2.847327 ATGTGAGAACCAGTGTCAGG 57.153 50.000 0.00 0.00 0.00 3.86
277 281 3.744942 CAGAATGTGAGAACCAGTGTCAG 59.255 47.826 0.00 0.00 0.00 3.51
278 282 3.732212 CAGAATGTGAGAACCAGTGTCA 58.268 45.455 0.00 0.00 0.00 3.58
279 283 2.481952 GCAGAATGTGAGAACCAGTGTC 59.518 50.000 0.00 0.00 39.31 3.67
280 284 2.158769 TGCAGAATGTGAGAACCAGTGT 60.159 45.455 0.00 0.00 39.31 3.55
281 285 2.497138 TGCAGAATGTGAGAACCAGTG 58.503 47.619 0.00 0.00 39.31 3.66
282 286 2.936919 TGCAGAATGTGAGAACCAGT 57.063 45.000 0.00 0.00 39.31 4.00
288 292 6.604396 ACATGGAATAAATGCAGAATGTGAGA 59.396 34.615 0.00 0.00 39.31 3.27
292 296 7.414222 AAGACATGGAATAAATGCAGAATGT 57.586 32.000 0.00 0.00 39.31 2.71
308 315 2.480555 GCACGCCGAAAGACATGG 59.519 61.111 0.00 0.00 0.00 3.66
311 318 0.875040 TAAACGCACGCCGAAAGACA 60.875 50.000 2.93 0.00 41.02 3.41
313 320 0.598158 ACTAAACGCACGCCGAAAGA 60.598 50.000 2.93 0.00 41.02 2.52
321 328 1.382419 CGTCTCTTCACTAAACGCACG 59.618 52.381 0.00 0.00 0.00 5.34
324 331 2.407696 GGAACGTCTCTTCACTAAACGC 59.592 50.000 0.00 0.00 36.85 4.84
325 332 2.985139 GGGAACGTCTCTTCACTAAACG 59.015 50.000 0.00 0.00 39.16 3.60
345 357 5.401376 CCACATACACATTTATAGTCGACGG 59.599 44.000 10.46 0.00 0.00 4.79
349 361 4.979815 TCGCCACATACACATTTATAGTCG 59.020 41.667 0.00 0.00 0.00 4.18
352 364 6.345803 CGAAGTCGCCACATACACATTTATAG 60.346 42.308 0.00 0.00 0.00 1.31
353 365 5.460748 CGAAGTCGCCACATACACATTTATA 59.539 40.000 0.00 0.00 0.00 0.98
355 367 3.615056 CGAAGTCGCCACATACACATTTA 59.385 43.478 0.00 0.00 0.00 1.40
380 392 1.544691 TCTGAGAAACTGAGCCGGTAC 59.455 52.381 1.90 0.00 0.00 3.34
385 397 1.943507 GCACCTCTGAGAAACTGAGCC 60.944 57.143 6.17 0.00 41.28 4.70
387 399 2.298446 TGAGCACCTCTGAGAAACTGAG 59.702 50.000 6.17 0.00 41.94 3.35
388 400 2.036475 GTGAGCACCTCTGAGAAACTGA 59.964 50.000 6.17 0.00 0.00 3.41
390 402 2.036992 CTGTGAGCACCTCTGAGAAACT 59.963 50.000 6.17 0.00 0.00 2.66
391 403 2.411904 CTGTGAGCACCTCTGAGAAAC 58.588 52.381 6.17 0.00 0.00 2.78
398 410 0.616111 CTACCCCTGTGAGCACCTCT 60.616 60.000 0.00 0.00 0.00 3.69
399 411 1.617947 CCTACCCCTGTGAGCACCTC 61.618 65.000 0.00 0.00 0.00 3.85
402 414 1.918800 ACCCTACCCCTGTGAGCAC 60.919 63.158 0.00 0.00 0.00 4.40
409 421 3.134081 CACATAAGTACACCCTACCCCTG 59.866 52.174 0.00 0.00 0.00 4.45
414 426 3.515330 ACGCACATAAGTACACCCTAC 57.485 47.619 0.00 0.00 0.00 3.18
417 429 2.690786 TGAACGCACATAAGTACACCC 58.309 47.619 0.00 0.00 0.00 4.61
419 431 6.309494 TGAAGTATGAACGCACATAAGTACAC 59.691 38.462 0.00 0.00 35.05 2.90
424 436 7.862873 TCTCTATGAAGTATGAACGCACATAAG 59.137 37.037 4.18 0.00 35.05 1.73
425 437 7.712797 TCTCTATGAAGTATGAACGCACATAA 58.287 34.615 4.18 0.00 35.05 1.90
429 441 8.575565 TTTATCTCTATGAAGTATGAACGCAC 57.424 34.615 0.00 0.00 0.00 5.34
453 467 7.148018 CCTCTAAAGTGACCATTTGCATACATT 60.148 37.037 0.00 0.00 0.00 2.71
459 473 4.072131 GTCCTCTAAAGTGACCATTTGCA 58.928 43.478 0.00 0.00 0.00 4.08
461 475 3.684788 CCGTCCTCTAAAGTGACCATTTG 59.315 47.826 0.00 0.00 0.00 2.32
462 476 3.307480 CCCGTCCTCTAAAGTGACCATTT 60.307 47.826 0.00 0.00 0.00 2.32
463 477 2.236395 CCCGTCCTCTAAAGTGACCATT 59.764 50.000 0.00 0.00 0.00 3.16
464 478 1.831736 CCCGTCCTCTAAAGTGACCAT 59.168 52.381 0.00 0.00 0.00 3.55
466 480 1.264295 ACCCGTCCTCTAAAGTGACC 58.736 55.000 0.00 0.00 0.00 4.02
467 481 2.821969 TGTACCCGTCCTCTAAAGTGAC 59.178 50.000 0.00 0.00 0.00 3.67
468 482 3.159213 TGTACCCGTCCTCTAAAGTGA 57.841 47.619 0.00 0.00 0.00 3.41
469 483 4.181578 CAATGTACCCGTCCTCTAAAGTG 58.818 47.826 0.00 0.00 0.00 3.16
470 484 3.197116 CCAATGTACCCGTCCTCTAAAGT 59.803 47.826 0.00 0.00 0.00 2.66
471 485 3.449737 TCCAATGTACCCGTCCTCTAAAG 59.550 47.826 0.00 0.00 0.00 1.85
476 490 1.192428 ACTCCAATGTACCCGTCCTC 58.808 55.000 0.00 0.00 0.00 3.71
480 494 6.891388 TCAAAATATACTCCAATGTACCCGT 58.109 36.000 0.00 0.00 0.00 5.28
481 495 7.795482 TTCAAAATATACTCCAATGTACCCG 57.205 36.000 0.00 0.00 0.00 5.28
508 522 8.330734 TGAAACTTCAGAAAAGCATTTTGGCAT 61.331 33.333 0.00 0.00 39.41 4.40
509 523 7.073733 TGAAACTTCAGAAAAGCATTTTGGCA 61.074 34.615 0.00 0.00 39.41 4.92
510 524 5.294060 TGAAACTTCAGAAAAGCATTTTGGC 59.706 36.000 0.00 0.00 39.41 4.52
511 525 6.907206 TGAAACTTCAGAAAAGCATTTTGG 57.093 33.333 0.00 0.00 39.41 3.28
512 526 9.609950 TTTTTGAAACTTCAGAAAAGCATTTTG 57.390 25.926 5.86 0.00 41.90 2.44
535 549 7.041712 ACGTGTTGGTTTGTTTTCAGAATTTTT 60.042 29.630 0.00 0.00 0.00 1.94
536 550 6.425417 ACGTGTTGGTTTGTTTTCAGAATTTT 59.575 30.769 0.00 0.00 0.00 1.82
537 551 5.929415 ACGTGTTGGTTTGTTTTCAGAATTT 59.071 32.000 0.00 0.00 0.00 1.82
538 552 5.474825 ACGTGTTGGTTTGTTTTCAGAATT 58.525 33.333 0.00 0.00 0.00 2.17
539 553 5.066968 ACGTGTTGGTTTGTTTTCAGAAT 57.933 34.783 0.00 0.00 0.00 2.40
540 554 4.506886 ACGTGTTGGTTTGTTTTCAGAA 57.493 36.364 0.00 0.00 0.00 3.02
541 555 4.506886 AACGTGTTGGTTTGTTTTCAGA 57.493 36.364 0.00 0.00 0.00 3.27
542 556 6.879188 ATAAACGTGTTGGTTTGTTTTCAG 57.121 33.333 0.00 0.00 40.18 3.02
543 557 8.188799 TCATATAAACGTGTTGGTTTGTTTTCA 58.811 29.630 0.00 0.00 40.18 2.69
544 558 8.563289 TCATATAAACGTGTTGGTTTGTTTTC 57.437 30.769 0.00 0.00 40.18 2.29
545 559 8.928270 TTCATATAAACGTGTTGGTTTGTTTT 57.072 26.923 0.00 0.00 40.18 2.43
546 560 8.973378 CATTCATATAAACGTGTTGGTTTGTTT 58.027 29.630 0.00 0.00 40.18 2.83
547 561 8.138712 ACATTCATATAAACGTGTTGGTTTGTT 58.861 29.630 0.00 0.00 40.18 2.83
548 562 7.653647 ACATTCATATAAACGTGTTGGTTTGT 58.346 30.769 0.00 0.00 40.18 2.83
549 563 9.781834 ATACATTCATATAAACGTGTTGGTTTG 57.218 29.630 0.00 0.00 40.18 2.93
574 588 8.605746 GCATCAAAATTTGCACATGTGTAATAT 58.394 29.630 26.72 19.42 38.72 1.28
575 589 7.818446 AGCATCAAAATTTGCACATGTGTAATA 59.182 29.630 26.72 18.27 41.35 0.98
576 590 6.651643 AGCATCAAAATTTGCACATGTGTAAT 59.348 30.769 26.72 21.47 41.35 1.89
577 591 5.990386 AGCATCAAAATTTGCACATGTGTAA 59.010 32.000 23.30 23.30 41.35 2.41
578 592 5.405873 CAGCATCAAAATTTGCACATGTGTA 59.594 36.000 26.01 20.04 41.35 2.90
579 593 4.212425 CAGCATCAAAATTTGCACATGTGT 59.788 37.500 26.01 4.19 41.35 3.72
580 594 4.449405 TCAGCATCAAAATTTGCACATGTG 59.551 37.500 21.83 21.83 41.35 3.21
581 595 4.633175 TCAGCATCAAAATTTGCACATGT 58.367 34.783 0.00 0.00 41.35 3.21
582 596 5.599359 TTCAGCATCAAAATTTGCACATG 57.401 34.783 0.00 1.54 41.35 3.21
583 597 6.811253 ATTTCAGCATCAAAATTTGCACAT 57.189 29.167 0.00 0.00 41.35 3.21
584 598 7.441760 ACTTATTTCAGCATCAAAATTTGCACA 59.558 29.630 0.00 0.00 41.35 4.57
585 599 7.799784 ACTTATTTCAGCATCAAAATTTGCAC 58.200 30.769 0.00 0.00 41.35 4.57
586 600 7.966246 ACTTATTTCAGCATCAAAATTTGCA 57.034 28.000 0.00 0.00 41.35 4.08
587 601 9.745323 GTTACTTATTTCAGCATCAAAATTTGC 57.255 29.630 0.00 0.00 39.17 3.68
589 603 9.995003 TGGTTACTTATTTCAGCATCAAAATTT 57.005 25.926 0.00 0.00 0.00 1.82
591 605 9.590451 CATGGTTACTTATTTCAGCATCAAAAT 57.410 29.630 0.00 0.00 0.00 1.82
592 606 8.584157 ACATGGTTACTTATTTCAGCATCAAAA 58.416 29.630 0.00 0.00 0.00 2.44
593 607 8.028354 CACATGGTTACTTATTTCAGCATCAAA 58.972 33.333 0.00 0.00 0.00 2.69
594 608 7.392953 TCACATGGTTACTTATTTCAGCATCAA 59.607 33.333 0.00 0.00 0.00 2.57
595 609 6.883756 TCACATGGTTACTTATTTCAGCATCA 59.116 34.615 0.00 0.00 0.00 3.07
596 610 7.066284 ACTCACATGGTTACTTATTTCAGCATC 59.934 37.037 0.00 0.00 0.00 3.91
597 611 6.886459 ACTCACATGGTTACTTATTTCAGCAT 59.114 34.615 0.00 0.00 0.00 3.79
598 612 6.237901 ACTCACATGGTTACTTATTTCAGCA 58.762 36.000 0.00 0.00 0.00 4.41
599 613 6.743575 ACTCACATGGTTACTTATTTCAGC 57.256 37.500 0.00 0.00 0.00 4.26
600 614 9.214957 TGTAACTCACATGGTTACTTATTTCAG 57.785 33.333 18.35 0.00 45.19 3.02
601 615 8.995220 GTGTAACTCACATGGTTACTTATTTCA 58.005 33.333 18.35 1.51 45.19 2.69
633 647 9.781633 TCATTTTTCCAAAATCATGATTTGTCT 57.218 25.926 29.52 14.79 40.57 3.41
676 690 9.897744 GACAAAATGATGATTTTCAAGTAGTGA 57.102 29.630 0.00 0.00 39.34 3.41
677 691 9.681692 TGACAAAATGATGATTTTCAAGTAGTG 57.318 29.630 0.00 0.00 39.34 2.74
693 707 9.624697 GTGAGCTATACAAAAATGACAAAATGA 57.375 29.630 0.00 0.00 0.00 2.57
694 708 9.409312 TGTGAGCTATACAAAAATGACAAAATG 57.591 29.630 1.05 0.00 0.00 2.32
696 710 9.409312 CATGTGAGCTATACAAAAATGACAAAA 57.591 29.630 7.30 0.00 0.00 2.44
697 711 8.575589 ACATGTGAGCTATACAAAAATGACAAA 58.424 29.630 0.00 0.00 0.00 2.83
698 712 8.109705 ACATGTGAGCTATACAAAAATGACAA 57.890 30.769 0.00 0.00 0.00 3.18
699 713 7.686438 ACATGTGAGCTATACAAAAATGACA 57.314 32.000 0.00 0.00 0.00 3.58
700 714 8.970691 AAACATGTGAGCTATACAAAAATGAC 57.029 30.769 0.00 0.00 0.00 3.06
704 718 9.891828 CAAGTAAACATGTGAGCTATACAAAAA 57.108 29.630 0.00 0.00 0.00 1.94
705 719 9.062524 ACAAGTAAACATGTGAGCTATACAAAA 57.937 29.630 0.00 0.00 0.00 2.44
706 720 8.615878 ACAAGTAAACATGTGAGCTATACAAA 57.384 30.769 0.00 0.00 0.00 2.83
707 721 8.615878 AACAAGTAAACATGTGAGCTATACAA 57.384 30.769 0.00 0.00 0.00 2.41
708 722 8.615878 AAACAAGTAAACATGTGAGCTATACA 57.384 30.769 0.00 5.82 0.00 2.29
709 723 8.717821 TGAAACAAGTAAACATGTGAGCTATAC 58.282 33.333 0.00 0.00 0.00 1.47
710 724 8.840833 TGAAACAAGTAAACATGTGAGCTATA 57.159 30.769 0.00 0.00 0.00 1.31
711 725 7.744087 TGAAACAAGTAAACATGTGAGCTAT 57.256 32.000 0.00 0.00 0.00 2.97
712 726 7.443879 TGATGAAACAAGTAAACATGTGAGCTA 59.556 33.333 0.00 0.00 0.00 3.32
713 727 6.262944 TGATGAAACAAGTAAACATGTGAGCT 59.737 34.615 0.00 0.00 0.00 4.09
714 728 6.360681 GTGATGAAACAAGTAAACATGTGAGC 59.639 38.462 0.00 0.00 0.00 4.26
715 729 6.857964 GGTGATGAAACAAGTAAACATGTGAG 59.142 38.462 0.00 0.00 0.00 3.51
716 730 6.319911 TGGTGATGAAACAAGTAAACATGTGA 59.680 34.615 0.00 0.00 0.00 3.58
717 731 6.502652 TGGTGATGAAACAAGTAAACATGTG 58.497 36.000 0.00 0.00 0.00 3.21
718 732 6.707440 TGGTGATGAAACAAGTAAACATGT 57.293 33.333 0.00 0.00 0.00 3.21
719 733 7.706179 AGTTTGGTGATGAAACAAGTAAACATG 59.294 33.333 0.00 0.00 36.03 3.21
720 734 7.781056 AGTTTGGTGATGAAACAAGTAAACAT 58.219 30.769 0.00 0.00 36.03 2.71
721 735 7.164230 AGTTTGGTGATGAAACAAGTAAACA 57.836 32.000 0.00 0.00 36.03 2.83
722 736 8.474006 AAAGTTTGGTGATGAAACAAGTAAAC 57.526 30.769 0.00 0.00 36.03 2.01
723 737 9.575783 GTAAAGTTTGGTGATGAAACAAGTAAA 57.424 29.630 0.00 0.00 36.03 2.01
724 738 8.740906 TGTAAAGTTTGGTGATGAAACAAGTAA 58.259 29.630 0.00 0.00 36.03 2.24
725 739 8.185505 GTGTAAAGTTTGGTGATGAAACAAGTA 58.814 33.333 0.00 0.00 36.03 2.24
726 740 7.033185 GTGTAAAGTTTGGTGATGAAACAAGT 58.967 34.615 0.00 0.00 36.03 3.16
727 741 7.032580 TGTGTAAAGTTTGGTGATGAAACAAG 58.967 34.615 0.00 0.00 36.03 3.16
728 742 6.925211 TGTGTAAAGTTTGGTGATGAAACAA 58.075 32.000 0.00 0.00 36.03 2.83
729 743 6.516739 TGTGTAAAGTTTGGTGATGAAACA 57.483 33.333 0.00 0.00 36.03 2.83
730 744 6.978080 ACATGTGTAAAGTTTGGTGATGAAAC 59.022 34.615 0.00 0.00 34.15 2.78
731 745 6.977502 CACATGTGTAAAGTTTGGTGATGAAA 59.022 34.615 18.03 0.00 0.00 2.69
732 746 6.096141 ACACATGTGTAAAGTTTGGTGATGAA 59.904 34.615 29.66 0.00 42.90 2.57
733 747 5.592282 ACACATGTGTAAAGTTTGGTGATGA 59.408 36.000 29.66 0.00 42.90 2.92
734 748 5.830912 ACACATGTGTAAAGTTTGGTGATG 58.169 37.500 29.66 0.00 42.90 3.07
748 762 9.797642 ATCATATGGATGTTATTACACATGTGT 57.202 29.630 32.47 32.47 40.15 3.72
752 766 9.676861 CCTGATCATATGGATGTTATTACACAT 57.323 33.333 2.13 0.00 40.25 3.21
753 767 8.659527 ACCTGATCATATGGATGTTATTACACA 58.340 33.333 6.49 0.00 37.03 3.72
770 784 8.980481 AACCGAAAATAATTCTACCTGATCAT 57.020 30.769 0.00 0.00 0.00 2.45
771 785 8.801882 AAACCGAAAATAATTCTACCTGATCA 57.198 30.769 0.00 0.00 0.00 2.92
827 841 8.837389 GCTGTATCGGAGGACTTTATTTTAATT 58.163 33.333 0.00 0.00 0.00 1.40
828 842 7.444487 GGCTGTATCGGAGGACTTTATTTTAAT 59.556 37.037 0.00 0.00 0.00 1.40
829 843 6.764560 GGCTGTATCGGAGGACTTTATTTTAA 59.235 38.462 0.00 0.00 0.00 1.52
830 844 6.285990 GGCTGTATCGGAGGACTTTATTTTA 58.714 40.000 0.00 0.00 0.00 1.52
831 845 5.123936 GGCTGTATCGGAGGACTTTATTTT 58.876 41.667 0.00 0.00 0.00 1.82
832 846 4.704965 GGCTGTATCGGAGGACTTTATTT 58.295 43.478 0.00 0.00 0.00 1.40
833 847 3.243771 CGGCTGTATCGGAGGACTTTATT 60.244 47.826 0.00 0.00 0.00 1.40
834 848 2.296471 CGGCTGTATCGGAGGACTTTAT 59.704 50.000 0.00 0.00 0.00 1.40
835 849 1.679680 CGGCTGTATCGGAGGACTTTA 59.320 52.381 0.00 0.00 0.00 1.85
836 850 0.460311 CGGCTGTATCGGAGGACTTT 59.540 55.000 0.00 0.00 0.00 2.66
837 851 2.116383 CGGCTGTATCGGAGGACTT 58.884 57.895 0.00 0.00 0.00 3.01
838 852 3.843304 CGGCTGTATCGGAGGACT 58.157 61.111 0.00 0.00 0.00 3.85
844 858 4.301027 GGAGCCCGGCTGTATCGG 62.301 72.222 19.21 0.00 46.43 4.18
845 859 2.587322 TTTGGAGCCCGGCTGTATCG 62.587 60.000 19.21 0.00 39.88 2.92
846 860 0.393808 TTTTGGAGCCCGGCTGTATC 60.394 55.000 19.21 1.61 39.88 2.24
847 861 0.039035 TTTTTGGAGCCCGGCTGTAT 59.961 50.000 19.21 0.00 39.88 2.29
848 862 0.039035 ATTTTTGGAGCCCGGCTGTA 59.961 50.000 19.21 1.82 39.88 2.74
849 863 1.228862 ATTTTTGGAGCCCGGCTGT 60.229 52.632 19.21 0.00 39.88 4.40
850 864 1.512694 GATTTTTGGAGCCCGGCTG 59.487 57.895 19.21 0.00 39.88 4.85
851 865 1.682344 GGATTTTTGGAGCCCGGCT 60.682 57.895 13.16 13.16 43.88 5.52
852 866 1.981853 TGGATTTTTGGAGCCCGGC 60.982 57.895 0.00 0.00 0.00 6.13
853 867 0.611896 AGTGGATTTTTGGAGCCCGG 60.612 55.000 0.00 0.00 0.00 5.73
854 868 0.811281 GAGTGGATTTTTGGAGCCCG 59.189 55.000 0.00 0.00 0.00 6.13
855 869 2.095461 GAGAGTGGATTTTTGGAGCCC 58.905 52.381 0.00 0.00 0.00 5.19
856 870 1.740025 CGAGAGTGGATTTTTGGAGCC 59.260 52.381 0.00 0.00 0.00 4.70
857 871 2.427506 ACGAGAGTGGATTTTTGGAGC 58.572 47.619 0.00 0.00 46.97 4.70
892 906 6.058183 TCAGTCGTCTCATAGAATCATCTCA 58.942 40.000 0.00 0.00 37.10 3.27
902 916 4.407818 GCCGATTATCAGTCGTCTCATAG 58.592 47.826 0.00 0.00 37.39 2.23
942 957 1.740025 GTTGTATCTGCCAACTGAGCC 59.260 52.381 0.00 0.00 39.24 4.70
989 1004 1.202177 CGAGGAACATTTGGGAATGCG 60.202 52.381 0.00 0.00 45.25 4.73
1251 1294 0.108138 CCTGAGGACACCAATCCGAC 60.108 60.000 0.00 0.00 44.22 4.79
1306 1349 1.004918 CCCCTTTCAAGTCGTCGCT 60.005 57.895 0.00 0.00 0.00 4.93
1316 1359 0.328258 GAAGTAGCAGCCCCCTTTCA 59.672 55.000 0.00 0.00 0.00 2.69
1317 1360 0.621082 AGAAGTAGCAGCCCCCTTTC 59.379 55.000 0.00 0.00 0.00 2.62
1319 1362 1.994463 CAGAAGTAGCAGCCCCCTT 59.006 57.895 0.00 0.00 0.00 3.95
1374 1417 2.619074 GCAGGAGGAATAGTGCAAAGGT 60.619 50.000 0.00 0.00 35.91 3.50
1458 1501 3.728845 TCACAGAAGAACAAGGTAGCAC 58.271 45.455 0.00 0.00 0.00 4.40
1525 1568 3.370978 AGTTAAGCGGTCATGACAAATCG 59.629 43.478 26.47 20.36 0.00 3.34
1532 1575 8.581578 TCATACAATATAGTTAAGCGGTCATGA 58.418 33.333 0.00 0.00 0.00 3.07
1548 1591 6.183361 ACAGTCCAAGGAGCATCATACAATAT 60.183 38.462 0.00 0.00 36.25 1.28
1553 1596 3.118629 TGACAGTCCAAGGAGCATCATAC 60.119 47.826 0.00 0.00 36.25 2.39
1567 1614 4.451629 TCTTTTATCCGTCTGACAGTCC 57.548 45.455 8.73 0.00 0.00 3.85
1614 1662 8.457238 AAAAGAGACAGTAATTTTGCTCTTCT 57.543 30.769 18.29 10.23 37.70 2.85
1640 1688 0.324943 ACCACACATCTTAGCCGCTT 59.675 50.000 0.00 0.00 0.00 4.68
1668 1717 3.686227 ATGCCATGGAATCCCTAAACA 57.314 42.857 18.40 0.00 0.00 2.83
1755 1804 5.008712 GTCATGAGATGCACATCAACATCAT 59.991 40.000 12.87 9.60 44.16 2.45
1825 1874 3.254411 TGTCAAGCAAAACGGCAATATCA 59.746 39.130 0.00 0.00 35.83 2.15
1864 1913 8.270744 AGAATAAAGACAGATAAGCCAAGATGT 58.729 33.333 0.00 0.00 0.00 3.06
1894 1943 1.070758 ACCACGTGAACTTCAGAGCAT 59.929 47.619 19.30 0.00 0.00 3.79
1944 1993 3.754965 TCCTGATATAACCATGCAAGCC 58.245 45.455 0.00 0.00 0.00 4.35
1968 2017 1.872952 TCAAGACAATCTGCACCAACG 59.127 47.619 0.00 0.00 0.00 4.10
2159 2240 3.814283 GGACCAACCGTACAACAACATAA 59.186 43.478 0.00 0.00 0.00 1.90
2202 2283 5.394802 CGAACTCCTCGTCCATCTATTATG 58.605 45.833 0.00 0.00 42.89 1.90
2351 2432 9.841295 ACTAATACTGTCAAAGAAACTTAACCA 57.159 29.630 0.00 0.00 0.00 3.67
2423 2504 5.350633 ACCAATTCAATACGGAATGCATTG 58.649 37.500 18.59 5.89 37.55 2.82
2528 2609 0.535797 GGTTGTAGAACGAGGGGAGG 59.464 60.000 0.00 0.00 32.28 4.30
2591 2672 9.732130 GCCATTATGATAGATATTAATCTCCCC 57.268 37.037 0.00 0.00 41.71 4.81
2655 2771 4.159135 CAGGGAAATGCAGCAGTTAAATCT 59.841 41.667 8.34 1.26 0.00 2.40
2676 2792 8.633075 AGACAACAACAAATTTTATGTCACAG 57.367 30.769 15.29 7.02 38.46 3.66
2686 2802 5.106752 GCCACAACAAGACAACAACAAATTT 60.107 36.000 0.00 0.00 0.00 1.82
2754 2870 8.636213 GGTATAACTTGGAGTTGCATAGTACTA 58.364 37.037 4.77 4.77 39.11 1.82
2941 3148 5.539048 AGAAGTAGAAAACTCGCTGCTTTA 58.461 37.500 0.00 0.00 37.23 1.85
2942 3149 4.381411 AGAAGTAGAAAACTCGCTGCTTT 58.619 39.130 0.00 0.00 37.23 3.51
2943 3150 3.996480 AGAAGTAGAAAACTCGCTGCTT 58.004 40.909 0.00 0.00 39.30 3.91
2944 3151 3.669251 AGAAGTAGAAAACTCGCTGCT 57.331 42.857 0.00 0.00 37.50 4.24
2952 3159 4.912528 CGAGAGCCAAGAAGTAGAAAAC 57.087 45.455 0.00 0.00 0.00 2.43
2968 3175 3.403038 TGAAAAGAAAGGGAAGCGAGAG 58.597 45.455 0.00 0.00 0.00 3.20
2969 3176 3.485463 TGAAAAGAAAGGGAAGCGAGA 57.515 42.857 0.00 0.00 0.00 4.04
2970 3177 4.568152 TTTGAAAAGAAAGGGAAGCGAG 57.432 40.909 0.00 0.00 0.00 5.03
2971 3178 5.068460 TGAATTTGAAAAGAAAGGGAAGCGA 59.932 36.000 0.00 0.00 0.00 4.93
2972 3179 5.288804 TGAATTTGAAAAGAAAGGGAAGCG 58.711 37.500 0.00 0.00 0.00 4.68
2973 3180 7.552458 TTTGAATTTGAAAAGAAAGGGAAGC 57.448 32.000 0.00 0.00 0.00 3.86
3007 3215 6.095377 GCAAGTTGACAGGAAAAGAATATGG 58.905 40.000 7.16 0.00 0.00 2.74
3065 3273 1.724623 GTCGTCAATTTAGCGTCTGCA 59.275 47.619 0.00 0.00 46.23 4.41
3123 3331 5.007385 AGAACAAAGGCTACATAGGTACG 57.993 43.478 0.00 0.00 0.00 3.67
3232 3443 4.453751 TGCTTGCATCAATGTAGCAGATA 58.546 39.130 14.03 0.00 40.22 1.98
3248 3459 0.799534 GCGTTCACATCCATGCTTGC 60.800 55.000 0.00 0.00 0.00 4.01
3346 3557 2.756207 GGAAGCGGCCATTAAGGTAAAA 59.244 45.455 2.24 0.00 40.61 1.52
3370 3581 2.168326 AACTGATGTCATGCACGTCA 57.832 45.000 15.09 15.09 46.98 4.35
3378 3589 3.021695 CCATGGCAGAAACTGATGTCAT 58.978 45.455 0.00 0.00 42.28 3.06
3395 3606 7.549839 ACCTTATGTGAATTCAATGAACCATG 58.450 34.615 10.35 0.13 0.00 3.66
3468 3679 0.258774 AGGAACCTGCAAGTGTTGGT 59.741 50.000 1.09 0.00 29.45 3.67
3507 3718 4.202223 GGACTCTACCAGTTCACTTCACAA 60.202 45.833 0.00 0.00 34.41 3.33
3563 3843 6.428159 ACTTACAATCTTTAGCACTTGGTCAG 59.572 38.462 0.00 0.00 0.00 3.51
3616 3937 5.578727 GGCATTAAACGAACATGGCATTAAA 59.421 36.000 0.00 0.00 41.83 1.52
3617 3938 5.105752 GGCATTAAACGAACATGGCATTAA 58.894 37.500 0.00 0.00 41.83 1.40
3618 3939 4.158579 TGGCATTAAACGAACATGGCATTA 59.841 37.500 0.00 0.00 45.60 1.90
3619 3940 3.056250 TGGCATTAAACGAACATGGCATT 60.056 39.130 0.00 0.00 45.60 3.56
3620 3941 2.495270 TGGCATTAAACGAACATGGCAT 59.505 40.909 11.65 0.00 45.60 4.40
3621 3942 2.645730 GGCATTAAACGAACATGGCA 57.354 45.000 0.00 0.00 41.83 4.92
3622 3943 2.645730 TGGCATTAAACGAACATGGC 57.354 45.000 0.00 0.00 42.40 4.40
3623 3944 4.493547 ACAATGGCATTAAACGAACATGG 58.506 39.130 13.23 0.00 0.00 3.66
3624 3945 5.632764 TCAACAATGGCATTAAACGAACATG 59.367 36.000 13.23 0.00 0.00 3.21
3625 3946 5.777802 TCAACAATGGCATTAAACGAACAT 58.222 33.333 13.23 0.00 0.00 2.71
3626 3947 5.188327 TCAACAATGGCATTAAACGAACA 57.812 34.783 13.23 0.00 0.00 3.18
3627 3948 5.689961 ACTTCAACAATGGCATTAAACGAAC 59.310 36.000 13.23 0.00 0.00 3.95
3628 3949 5.837437 ACTTCAACAATGGCATTAAACGAA 58.163 33.333 13.23 11.75 0.00 3.85
3629 3950 5.446143 ACTTCAACAATGGCATTAAACGA 57.554 34.783 13.23 4.68 0.00 3.85
3630 3951 6.199908 TGAAACTTCAACAATGGCATTAAACG 59.800 34.615 13.23 2.96 33.55 3.60
3658 3979 7.804600 GCGAATGCATCAAAGATTGAATACATA 59.195 33.333 0.00 0.00 43.95 2.29
3671 3992 9.002600 ACAAATCTATATAGCGAATGCATCAAA 57.997 29.630 0.00 0.00 46.23 2.69
3691 4012 5.886960 ACTGATGGTAGCTTTGACAAATC 57.113 39.130 0.05 0.00 0.00 2.17
3692 4013 6.655078 AAACTGATGGTAGCTTTGACAAAT 57.345 33.333 0.05 0.00 0.00 2.32
3725 4046 2.987232 ACCGATGGTAGCTTTCCTTTC 58.013 47.619 0.00 0.00 32.11 2.62
3747 4068 7.475015 TGTGAAGACAGATTTCTTTCACAAAG 58.525 34.615 17.62 0.00 38.83 2.77
3751 4072 6.073548 ACGATGTGAAGACAGATTTCTTTCAC 60.074 38.462 13.17 13.17 35.90 3.18
3775 4096 8.243426 TCATGTTTAACCTGCATAAGAAATGAC 58.757 33.333 0.00 0.00 0.00 3.06
3802 4123 5.854010 AGATAGCTCGACAGGTTCAATTA 57.146 39.130 0.00 0.00 0.00 1.40
3803 4124 4.744795 AGATAGCTCGACAGGTTCAATT 57.255 40.909 0.00 0.00 0.00 2.32
3805 4126 4.887655 TCATAGATAGCTCGACAGGTTCAA 59.112 41.667 0.00 0.00 0.00 2.69
3815 4136 5.635417 TTCTCCACATCATAGATAGCTCG 57.365 43.478 0.00 0.00 0.00 5.03
3900 4221 5.864418 AAGGACACTGTACAGTTGAAGTA 57.136 39.130 25.89 0.00 40.20 2.24
3953 4274 5.105063 GCTCTTTGCAAATTGGAAGGATAC 58.895 41.667 13.23 4.99 42.31 2.24
3971 4292 1.080995 GCGACGATGAAGCTGCTCTT 61.081 55.000 1.00 0.00 37.83 2.85
4041 4362 5.305902 TGGGAGACACAGAACTGTTAATACA 59.694 40.000 4.63 0.00 42.83 2.29
4042 4363 5.790593 TGGGAGACACAGAACTGTTAATAC 58.209 41.667 4.63 0.00 42.83 1.89
4058 4379 6.532988 AAAAGTATGTAGAGAGTGGGAGAC 57.467 41.667 0.00 0.00 0.00 3.36
4059 4380 7.640313 TCTAAAAGTATGTAGAGAGTGGGAGA 58.360 38.462 0.00 0.00 0.00 3.71
4099 4420 3.593442 TCCCCAATGTCTCAGTTTGTT 57.407 42.857 0.00 0.00 0.00 2.83
4151 4472 1.479730 GTAATTCCGAACGGAGGGAGT 59.520 52.381 15.34 4.12 46.06 3.85
4152 4473 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
4153 4474 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
4154 4475 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
4155 4476 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
4156 4477 3.846360 AGACAAGTAATTCCGAACGGAG 58.154 45.455 15.34 5.60 46.06 4.63
4157 4478 3.671433 CGAGACAAGTAATTCCGAACGGA 60.671 47.826 12.04 12.04 43.52 4.69
4158 4479 2.597305 CGAGACAAGTAATTCCGAACGG 59.403 50.000 6.94 6.94 0.00 4.44
4159 4480 2.597305 CCGAGACAAGTAATTCCGAACG 59.403 50.000 0.00 0.00 0.00 3.95
4160 4481 3.841643 TCCGAGACAAGTAATTCCGAAC 58.158 45.455 0.00 0.00 0.00 3.95
4161 4482 4.524316 TTCCGAGACAAGTAATTCCGAA 57.476 40.909 0.00 0.00 0.00 4.30
4162 4483 4.524316 TTTCCGAGACAAGTAATTCCGA 57.476 40.909 0.00 0.00 0.00 4.55
4163 4484 4.034048 CCATTTCCGAGACAAGTAATTCCG 59.966 45.833 0.00 0.00 0.00 4.30
4164 4485 5.183228 TCCATTTCCGAGACAAGTAATTCC 58.817 41.667 0.00 0.00 0.00 3.01
4165 4486 6.316390 ACATCCATTTCCGAGACAAGTAATTC 59.684 38.462 0.00 0.00 0.00 2.17
4166 4487 6.094048 CACATCCATTTCCGAGACAAGTAATT 59.906 38.462 0.00 0.00 0.00 1.40
4167 4488 5.586243 CACATCCATTTCCGAGACAAGTAAT 59.414 40.000 0.00 0.00 0.00 1.89
4168 4489 4.935205 CACATCCATTTCCGAGACAAGTAA 59.065 41.667 0.00 0.00 0.00 2.24
4169 4490 4.020573 ACACATCCATTTCCGAGACAAGTA 60.021 41.667 0.00 0.00 0.00 2.24
4170 4491 3.244561 ACACATCCATTTCCGAGACAAGT 60.245 43.478 0.00 0.00 0.00 3.16
4171 4492 3.338249 ACACATCCATTTCCGAGACAAG 58.662 45.455 0.00 0.00 0.00 3.16
4172 4493 3.007940 AGACACATCCATTTCCGAGACAA 59.992 43.478 0.00 0.00 0.00 3.18
4173 4494 2.567169 AGACACATCCATTTCCGAGACA 59.433 45.455 0.00 0.00 0.00 3.41
4174 4495 3.252974 AGACACATCCATTTCCGAGAC 57.747 47.619 0.00 0.00 0.00 3.36
4175 4496 4.278310 TCTAGACACATCCATTTCCGAGA 58.722 43.478 0.00 0.00 0.00 4.04
4176 4497 4.655762 TCTAGACACATCCATTTCCGAG 57.344 45.455 0.00 0.00 0.00 4.63
4177 4498 4.466370 AGTTCTAGACACATCCATTTCCGA 59.534 41.667 0.00 0.00 0.00 4.55
4178 4499 4.759782 AGTTCTAGACACATCCATTTCCG 58.240 43.478 0.00 0.00 0.00 4.30
4179 4500 8.561738 TTTTAGTTCTAGACACATCCATTTCC 57.438 34.615 0.00 0.00 0.00 3.13
4184 4505 9.871238 GACTTATTTTAGTTCTAGACACATCCA 57.129 33.333 0.00 0.00 0.00 3.41
4204 4525 8.993121 CGCAAAAATGGATGTATCTAGACTTAT 58.007 33.333 0.00 0.00 0.00 1.73
4205 4526 8.201464 TCGCAAAAATGGATGTATCTAGACTTA 58.799 33.333 0.00 0.00 0.00 2.24
4206 4527 7.011482 GTCGCAAAAATGGATGTATCTAGACTT 59.989 37.037 0.00 0.00 0.00 3.01
4207 4528 6.480320 GTCGCAAAAATGGATGTATCTAGACT 59.520 38.462 0.00 0.00 0.00 3.24
4208 4529 6.257849 TGTCGCAAAAATGGATGTATCTAGAC 59.742 38.462 0.00 0.00 0.00 2.59
4209 4530 6.345298 TGTCGCAAAAATGGATGTATCTAGA 58.655 36.000 0.00 0.00 0.00 2.43
4210 4531 6.603237 TGTCGCAAAAATGGATGTATCTAG 57.397 37.500 0.00 0.00 0.00 2.43
4211 4532 6.597672 ACTTGTCGCAAAAATGGATGTATCTA 59.402 34.615 0.00 0.00 0.00 1.98
4212 4533 5.415701 ACTTGTCGCAAAAATGGATGTATCT 59.584 36.000 0.00 0.00 0.00 1.98
4213 4534 5.640732 ACTTGTCGCAAAAATGGATGTATC 58.359 37.500 0.00 0.00 0.00 2.24
4214 4535 5.643379 ACTTGTCGCAAAAATGGATGTAT 57.357 34.783 0.00 0.00 0.00 2.29
4215 4536 6.561737 TTACTTGTCGCAAAAATGGATGTA 57.438 33.333 0.00 0.00 0.00 2.29
4216 4537 5.446143 TTACTTGTCGCAAAAATGGATGT 57.554 34.783 0.00 0.00 0.00 3.06
4217 4538 6.034898 GGAATTACTTGTCGCAAAAATGGATG 59.965 38.462 0.00 0.00 0.00 3.51
4218 4539 6.099341 GGAATTACTTGTCGCAAAAATGGAT 58.901 36.000 0.00 0.00 0.00 3.41
4219 4540 5.465935 GGAATTACTTGTCGCAAAAATGGA 58.534 37.500 0.00 0.00 0.00 3.41
4220 4541 4.323336 CGGAATTACTTGTCGCAAAAATGG 59.677 41.667 0.00 0.00 0.00 3.16
4221 4542 5.150683 TCGGAATTACTTGTCGCAAAAATG 58.849 37.500 0.00 0.00 0.00 2.32
4222 4543 5.365403 TCGGAATTACTTGTCGCAAAAAT 57.635 34.783 0.00 0.00 0.00 1.82
4223 4544 4.815040 TCGGAATTACTTGTCGCAAAAA 57.185 36.364 0.00 0.00 0.00 1.94
4224 4545 4.529446 GTTCGGAATTACTTGTCGCAAAA 58.471 39.130 0.00 0.00 0.00 2.44
4225 4546 3.363182 CGTTCGGAATTACTTGTCGCAAA 60.363 43.478 0.00 0.00 0.00 3.68
4226 4547 2.156117 CGTTCGGAATTACTTGTCGCAA 59.844 45.455 0.00 0.00 0.00 4.85
4227 4548 1.722464 CGTTCGGAATTACTTGTCGCA 59.278 47.619 0.00 0.00 0.00 5.10
4228 4549 1.060122 CCGTTCGGAATTACTTGTCGC 59.940 52.381 5.19 0.00 0.00 5.19
4229 4550 2.597305 CTCCGTTCGGAATTACTTGTCG 59.403 50.000 14.79 0.00 33.41 4.35
4230 4551 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
4231 4552 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
4232 4553 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
4233 4554 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
4234 4555 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
4235 4556 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
4236 4557 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
4237 4558 1.479730 GTACTCCCTCCGTTCGGAATT 59.520 52.381 14.79 0.00 33.41 2.17
4238 4559 1.109609 GTACTCCCTCCGTTCGGAAT 58.890 55.000 14.79 2.09 33.41 3.01
4239 4560 0.038744 AGTACTCCCTCCGTTCGGAA 59.961 55.000 14.79 0.04 33.41 4.30
4240 4561 0.038744 AAGTACTCCCTCCGTTCGGA 59.961 55.000 13.34 13.34 0.00 4.55
4241 4562 0.893447 AAAGTACTCCCTCCGTTCGG 59.107 55.000 4.74 4.74 0.00 4.30
4242 4563 1.817447 AGAAAGTACTCCCTCCGTTCG 59.183 52.381 0.00 0.00 0.00 3.95
4243 4564 3.380954 CCTAGAAAGTACTCCCTCCGTTC 59.619 52.174 0.00 0.00 0.00 3.95
4244 4565 3.011032 TCCTAGAAAGTACTCCCTCCGTT 59.989 47.826 0.00 0.00 0.00 4.44
4245 4566 2.579860 TCCTAGAAAGTACTCCCTCCGT 59.420 50.000 0.00 0.00 0.00 4.69
4246 4567 3.294038 TCCTAGAAAGTACTCCCTCCG 57.706 52.381 0.00 0.00 0.00 4.63
4247 4568 4.869451 TCTTCCTAGAAAGTACTCCCTCC 58.131 47.826 0.00 0.00 0.00 4.30
4248 4569 5.894964 ACATCTTCCTAGAAAGTACTCCCTC 59.105 44.000 0.00 0.00 33.20 4.30
4249 4570 5.844601 ACATCTTCCTAGAAAGTACTCCCT 58.155 41.667 0.00 0.00 33.20 4.20
4250 4571 6.834969 AGTACATCTTCCTAGAAAGTACTCCC 59.165 42.308 13.46 0.00 44.41 4.30
4251 4572 7.885009 AGTACATCTTCCTAGAAAGTACTCC 57.115 40.000 13.46 0.00 44.41 3.85
4254 4575 7.319142 ACGAGTACATCTTCCTAGAAAGTAC 57.681 40.000 0.00 0.00 41.48 2.73
4255 4576 6.257411 CGACGAGTACATCTTCCTAGAAAGTA 59.743 42.308 0.00 0.00 33.20 2.24
4256 4577 5.064962 CGACGAGTACATCTTCCTAGAAAGT 59.935 44.000 0.00 0.00 33.20 2.66
4263 4584 3.127203 CAGTTCGACGAGTACATCTTCCT 59.873 47.826 0.00 0.00 0.00 3.36
4305 4626 3.319405 TGTTGGTGTACAAAATTCGGCAT 59.681 39.130 0.00 0.00 41.58 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.