Multiple sequence alignment - TraesCS7B01G296300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G296300 chr7B 100.000 2690 0 0 1 2690 532658201 532655512 0.000000e+00 4968.0
1 TraesCS7B01G296300 chr7A 93.409 1411 44 24 740 2129 572326826 572325444 0.000000e+00 2045.0
2 TraesCS7B01G296300 chr7A 96.024 327 10 2 740 1066 572327696 572327373 1.830000e-146 529.0
3 TraesCS7B01G296300 chr7A 95.738 305 13 0 428 732 633395991 633396295 2.410000e-135 492.0
4 TraesCS7B01G296300 chr7A 91.864 295 24 0 1158 1452 689896770 689896476 1.930000e-111 412.0
5 TraesCS7B01G296300 chr7A 89.583 240 17 3 195 426 572327943 572327704 5.630000e-77 298.0
6 TraesCS7B01G296300 chr7A 87.793 213 24 2 20 231 572335095 572334884 5.750000e-62 248.0
7 TraesCS7B01G296300 chr7A 81.040 327 38 16 2260 2582 572324485 572324179 3.460000e-59 239.0
8 TraesCS7B01G296300 chr7A 98.198 111 2 0 1479 1589 689896478 689896368 7.600000e-46 195.0
9 TraesCS7B01G296300 chr7D 92.958 1420 43 27 733 2129 504770417 504769032 0.000000e+00 2015.0
10 TraesCS7B01G296300 chr7D 89.220 436 37 5 2 429 504770841 504770408 1.100000e-148 536.0
11 TraesCS7B01G296300 chr7D 98.077 52 1 0 2273 2324 504767800 504767749 1.030000e-14 91.6
12 TraesCS7B01G296300 chrUn 89.865 444 38 4 1014 1452 29286176 29285735 5.030000e-157 564.0
13 TraesCS7B01G296300 chrUn 96.396 111 4 0 1479 1589 29285737 29285627 1.640000e-42 183.0
14 TraesCS7B01G296300 chr6D 81.023 743 110 21 962 1691 135113765 135114489 1.810000e-156 562.0
15 TraesCS7B01G296300 chr6B 82.871 613 91 11 1085 1690 233694067 233694672 3.050000e-149 538.0
16 TraesCS7B01G296300 chr6B 94.872 312 14 2 425 734 551770223 551769912 1.120000e-133 486.0
17 TraesCS7B01G296300 chr6B 94.839 310 16 0 422 731 634640318 634640627 4.030000e-133 484.0
18 TraesCS7B01G296300 chr6B 91.765 340 23 5 419 755 705634292 705633955 4.060000e-128 468.0
19 TraesCS7B01G296300 chr3A 96.711 304 9 1 429 731 686167371 686167674 3.090000e-139 505.0
20 TraesCS7B01G296300 chr3A 94.888 313 14 2 421 731 12743844 12743532 3.110000e-134 488.0
21 TraesCS7B01G296300 chr2B 96.091 307 11 1 426 731 24865913 24866219 1.440000e-137 499.0
22 TraesCS7B01G296300 chr2B 94.603 315 17 0 426 740 798371634 798371948 3.110000e-134 488.0
23 TraesCS7B01G296300 chr5A 96.053 304 10 2 429 731 315497715 315498017 6.690000e-136 494.0
24 TraesCS7B01G296300 chr2D 91.781 292 23 1 1161 1452 29147785 29148075 3.220000e-109 405.0
25 TraesCS7B01G296300 chr2D 98.198 111 2 0 1479 1589 29148073 29148183 7.600000e-46 195.0
26 TraesCS7B01G296300 chr1D 92.473 279 21 0 1158 1436 493794518 493794796 1.500000e-107 399.0
27 TraesCS7B01G296300 chr1D 98.198 111 2 0 1479 1589 493812324 493812434 7.600000e-46 195.0
28 TraesCS7B01G296300 chr1D 89.855 138 9 3 1014 1146 493794412 493794549 3.560000e-39 172.0
29 TraesCS7B01G296300 chr3B 92.793 111 8 0 1479 1589 544847242 544847132 7.710000e-36 161.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G296300 chr7B 532655512 532658201 2689 True 4968.000000 4968 100.000000 1 2690 1 chr7B.!!$R1 2689
1 TraesCS7B01G296300 chr7A 572324179 572327943 3764 True 777.750000 2045 90.014000 195 2582 4 chr7A.!!$R2 2387
2 TraesCS7B01G296300 chr7D 504767749 504770841 3092 True 880.866667 2015 93.418333 2 2324 3 chr7D.!!$R1 2322
3 TraesCS7B01G296300 chrUn 29285627 29286176 549 True 373.500000 564 93.130500 1014 1589 2 chrUn.!!$R1 575
4 TraesCS7B01G296300 chr6D 135113765 135114489 724 False 562.000000 562 81.023000 962 1691 1 chr6D.!!$F1 729
5 TraesCS7B01G296300 chr6B 233694067 233694672 605 False 538.000000 538 82.871000 1085 1690 1 chr6B.!!$F1 605

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
672 682 0.041663 GTGTGCGTGCGTGTGTTTAT 60.042 50.0 0.0 0.0 0.0 1.4 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2611 4674 0.035056 ACTCCCTCCGAGCCAAATTG 60.035 55.0 0.0 0.0 43.01 2.32 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 2.943034 GACGCTACGCTTCGTCGG 60.943 66.667 7.89 0.00 44.18 4.79
29 30 4.471726 ACGCTACGCTTCGTCGGG 62.472 66.667 6.44 6.44 41.54 5.14
47 48 3.157680 CCCCTTGTCTTCCACCGT 58.842 61.111 0.00 0.00 0.00 4.83
56 57 1.671054 CTTCCACCGTGCAATCCGT 60.671 57.895 0.00 0.00 0.00 4.69
61 62 0.948623 CACCGTGCAATCCGTCAAGA 60.949 55.000 0.00 0.00 0.00 3.02
66 67 2.151202 GTGCAATCCGTCAAGAAGGAA 58.849 47.619 8.76 0.00 42.06 3.36
70 71 0.249398 ATCCGTCAAGAAGGAACCCG 59.751 55.000 8.76 0.00 42.06 5.28
72 73 1.301401 CGTCAAGAAGGAACCCGCA 60.301 57.895 0.00 0.00 0.00 5.69
73 74 0.882927 CGTCAAGAAGGAACCCGCAA 60.883 55.000 0.00 0.00 0.00 4.85
75 76 1.886542 GTCAAGAAGGAACCCGCAAAT 59.113 47.619 0.00 0.00 0.00 2.32
89 90 1.323534 CGCAAATAAGGAAGACGACGG 59.676 52.381 0.00 0.00 0.00 4.79
106 107 1.431488 CGGCATCGACATCAACTGGG 61.431 60.000 0.00 0.00 39.00 4.45
114 115 1.450312 CATCAACTGGGCGGAGGTC 60.450 63.158 0.00 0.00 0.00 3.85
136 138 2.582978 GGAGTAGGACCCGTTGCC 59.417 66.667 0.00 0.00 0.00 4.52
174 176 1.429463 ATCCGAGTTCGAGCAACAAC 58.571 50.000 1.01 0.00 43.02 3.32
186 188 1.341531 AGCAACAACTCTGACTAGCGT 59.658 47.619 0.00 0.00 0.00 5.07
191 193 3.643763 ACAACTCTGACTAGCGTTTCAG 58.356 45.455 2.40 2.40 40.65 3.02
270 278 1.423395 GACACTCCGTCAAGCAAGAG 58.577 55.000 0.00 0.00 44.69 2.85
301 309 1.623542 CCCTACAACCTTCCCCTCCG 61.624 65.000 0.00 0.00 0.00 4.63
303 311 2.573609 CTACAACCTTCCCCTCCGCG 62.574 65.000 0.00 0.00 0.00 6.46
338 347 1.006825 GTTTGCCGTTCGAAATGCCC 61.007 55.000 15.25 2.94 0.00 5.36
344 353 0.673644 CGTTCGAAATGCCCTCACCT 60.674 55.000 0.00 0.00 0.00 4.00
364 373 5.236478 CACCTCGTCTTTGTACAAATTCACT 59.764 40.000 20.83 1.37 0.00 3.41
369 378 9.318041 CTCGTCTTTGTACAAATTCACTAAATG 57.682 33.333 20.83 6.09 0.00 2.32
406 416 2.224867 ACAAACAATCCTCACCCTCCAG 60.225 50.000 0.00 0.00 0.00 3.86
423 433 8.265055 CACCCTCCAGATTTTGTCTAGTATTTA 58.735 37.037 0.00 0.00 34.69 1.40
424 434 9.004231 ACCCTCCAGATTTTGTCTAGTATTTAT 57.996 33.333 0.00 0.00 34.69 1.40
441 451 8.677148 AGTATTTATATTGCGAATCAACCTGT 57.323 30.769 0.00 0.00 37.53 4.00
442 452 8.559536 AGTATTTATATTGCGAATCAACCTGTG 58.440 33.333 0.00 0.00 37.53 3.66
443 453 5.749596 TTATATTGCGAATCAACCTGTGG 57.250 39.130 0.00 0.00 37.53 4.17
444 454 1.909700 ATTGCGAATCAACCTGTGGT 58.090 45.000 0.00 0.00 37.53 4.16
454 464 2.525105 AACCTGTGGTTGAGTTGGTT 57.475 45.000 0.71 0.00 45.07 3.67
455 465 3.655615 AACCTGTGGTTGAGTTGGTTA 57.344 42.857 0.71 0.00 45.07 2.85
456 466 3.208747 ACCTGTGGTTGAGTTGGTTAG 57.791 47.619 0.00 0.00 27.29 2.34
457 467 2.158667 ACCTGTGGTTGAGTTGGTTAGG 60.159 50.000 0.00 0.00 27.29 2.69
458 468 2.158667 CCTGTGGTTGAGTTGGTTAGGT 60.159 50.000 0.00 0.00 0.00 3.08
459 469 2.878406 CTGTGGTTGAGTTGGTTAGGTG 59.122 50.000 0.00 0.00 0.00 4.00
460 470 2.227194 GTGGTTGAGTTGGTTAGGTGG 58.773 52.381 0.00 0.00 0.00 4.61
461 471 2.128535 TGGTTGAGTTGGTTAGGTGGA 58.871 47.619 0.00 0.00 0.00 4.02
462 472 2.158726 TGGTTGAGTTGGTTAGGTGGAC 60.159 50.000 0.00 0.00 0.00 4.02
463 473 2.158726 GGTTGAGTTGGTTAGGTGGACA 60.159 50.000 0.00 0.00 0.00 4.02
464 474 3.139077 GTTGAGTTGGTTAGGTGGACAG 58.861 50.000 0.00 0.00 0.00 3.51
465 475 2.404559 TGAGTTGGTTAGGTGGACAGT 58.595 47.619 0.00 0.00 0.00 3.55
466 476 2.104111 TGAGTTGGTTAGGTGGACAGTG 59.896 50.000 0.00 0.00 0.00 3.66
467 477 1.420138 AGTTGGTTAGGTGGACAGTGG 59.580 52.381 0.00 0.00 0.00 4.00
468 478 1.142262 GTTGGTTAGGTGGACAGTGGT 59.858 52.381 0.00 0.00 0.00 4.16
469 479 2.369532 GTTGGTTAGGTGGACAGTGGTA 59.630 50.000 0.00 0.00 0.00 3.25
470 480 2.910544 TGGTTAGGTGGACAGTGGTAT 58.089 47.619 0.00 0.00 0.00 2.73
471 481 2.835764 TGGTTAGGTGGACAGTGGTATC 59.164 50.000 0.00 0.00 0.00 2.24
472 482 2.169978 GGTTAGGTGGACAGTGGTATCC 59.830 54.545 0.00 0.00 35.37 2.59
473 483 2.169978 GTTAGGTGGACAGTGGTATCCC 59.830 54.545 0.00 0.00 33.69 3.85
474 484 0.620700 AGGTGGACAGTGGTATCCCC 60.621 60.000 0.00 0.00 33.69 4.81
475 485 0.912487 GGTGGACAGTGGTATCCCCA 60.912 60.000 0.00 0.00 42.51 4.96
482 492 3.844063 TGGTATCCCCAACCCACC 58.156 61.111 0.00 0.00 41.50 4.61
483 493 1.151565 TGGTATCCCCAACCCACCA 60.152 57.895 0.00 0.00 41.50 4.17
484 494 1.211567 TGGTATCCCCAACCCACCAG 61.212 60.000 0.00 0.00 41.50 4.00
485 495 1.613061 GTATCCCCAACCCACCAGG 59.387 63.158 0.00 0.00 43.78 4.45
503 513 3.087370 AGGGTTTAAATCCTGGTGCTC 57.913 47.619 19.53 0.00 38.36 4.26
504 514 1.743394 GGGTTTAAATCCTGGTGCTCG 59.257 52.381 10.45 0.00 0.00 5.03
505 515 1.132453 GGTTTAAATCCTGGTGCTCGC 59.868 52.381 0.00 0.00 0.00 5.03
506 516 1.810151 GTTTAAATCCTGGTGCTCGCA 59.190 47.619 0.00 0.00 0.00 5.10
507 517 2.418368 TTAAATCCTGGTGCTCGCAT 57.582 45.000 0.00 0.00 0.00 4.73
508 518 2.418368 TAAATCCTGGTGCTCGCATT 57.582 45.000 0.00 0.00 0.00 3.56
509 519 2.418368 AAATCCTGGTGCTCGCATTA 57.582 45.000 0.00 0.00 0.00 1.90
510 520 2.645838 AATCCTGGTGCTCGCATTAT 57.354 45.000 0.00 0.00 0.00 1.28
511 521 2.645838 ATCCTGGTGCTCGCATTATT 57.354 45.000 0.00 0.00 0.00 1.40
512 522 1.953559 TCCTGGTGCTCGCATTATTC 58.046 50.000 0.00 0.00 0.00 1.75
513 523 0.947244 CCTGGTGCTCGCATTATTCC 59.053 55.000 0.00 0.00 0.00 3.01
514 524 1.475751 CCTGGTGCTCGCATTATTCCT 60.476 52.381 0.00 0.00 0.00 3.36
515 525 1.600957 CTGGTGCTCGCATTATTCCTG 59.399 52.381 0.00 0.00 0.00 3.86
516 526 0.947244 GGTGCTCGCATTATTCCTGG 59.053 55.000 0.00 0.00 0.00 4.45
517 527 1.475034 GGTGCTCGCATTATTCCTGGA 60.475 52.381 0.00 0.00 0.00 3.86
518 528 2.498167 GTGCTCGCATTATTCCTGGAT 58.502 47.619 0.00 0.00 0.00 3.41
519 529 2.880890 GTGCTCGCATTATTCCTGGATT 59.119 45.455 0.00 0.00 0.00 3.01
520 530 3.316308 GTGCTCGCATTATTCCTGGATTT 59.684 43.478 0.00 0.00 0.00 2.17
521 531 4.515191 GTGCTCGCATTATTCCTGGATTTA 59.485 41.667 0.00 0.00 0.00 1.40
522 532 5.182001 GTGCTCGCATTATTCCTGGATTTAT 59.818 40.000 0.00 0.00 0.00 1.40
523 533 5.769662 TGCTCGCATTATTCCTGGATTTATT 59.230 36.000 0.00 0.00 0.00 1.40
524 534 6.265196 TGCTCGCATTATTCCTGGATTTATTT 59.735 34.615 0.00 0.00 0.00 1.40
525 535 6.803807 GCTCGCATTATTCCTGGATTTATTTC 59.196 38.462 0.00 0.00 0.00 2.17
526 536 7.522073 GCTCGCATTATTCCTGGATTTATTTCA 60.522 37.037 0.00 0.00 0.00 2.69
527 537 7.874940 TCGCATTATTCCTGGATTTATTTCAG 58.125 34.615 0.00 0.00 0.00 3.02
528 538 7.040478 TCGCATTATTCCTGGATTTATTTCAGG 60.040 37.037 0.00 0.00 46.91 3.86
536 546 6.076981 CTGGATTTATTTCAGGATTTCCGG 57.923 41.667 0.00 0.00 42.08 5.14
537 547 4.340950 TGGATTTATTTCAGGATTTCCGGC 59.659 41.667 0.00 0.00 42.08 6.13
538 548 4.537015 GATTTATTTCAGGATTTCCGGCG 58.463 43.478 0.00 0.00 42.08 6.46
539 549 2.992124 TATTTCAGGATTTCCGGCGA 57.008 45.000 9.30 0.00 42.08 5.54
540 550 2.348411 ATTTCAGGATTTCCGGCGAT 57.652 45.000 9.30 0.00 42.08 4.58
541 551 1.378531 TTTCAGGATTTCCGGCGATG 58.621 50.000 9.30 0.00 42.08 3.84
542 552 1.095228 TTCAGGATTTCCGGCGATGC 61.095 55.000 9.30 0.00 42.08 3.91
543 553 2.588877 AGGATTTCCGGCGATGCG 60.589 61.111 9.30 0.00 42.08 4.73
554 564 2.787249 CGATGCGCTTTCAGTGGG 59.213 61.111 9.73 0.00 0.00 4.61
555 565 1.741401 CGATGCGCTTTCAGTGGGA 60.741 57.895 9.73 0.00 0.00 4.37
556 566 1.699656 CGATGCGCTTTCAGTGGGAG 61.700 60.000 9.73 0.00 0.00 4.30
557 567 1.372087 GATGCGCTTTCAGTGGGAGG 61.372 60.000 9.73 0.00 0.00 4.30
558 568 1.841302 ATGCGCTTTCAGTGGGAGGA 61.841 55.000 9.73 0.00 0.00 3.71
559 569 1.302511 GCGCTTTCAGTGGGAGGAA 60.303 57.895 0.00 0.00 0.00 3.36
560 570 0.889186 GCGCTTTCAGTGGGAGGAAA 60.889 55.000 0.00 0.00 0.00 3.13
561 571 0.875059 CGCTTTCAGTGGGAGGAAAC 59.125 55.000 0.00 0.00 0.00 2.78
562 572 0.875059 GCTTTCAGTGGGAGGAAACG 59.125 55.000 0.00 0.00 0.00 3.60
563 573 1.814248 GCTTTCAGTGGGAGGAAACGT 60.814 52.381 0.00 0.00 0.00 3.99
564 574 2.572290 CTTTCAGTGGGAGGAAACGTT 58.428 47.619 0.00 0.00 0.00 3.99
565 575 2.249844 TTCAGTGGGAGGAAACGTTC 57.750 50.000 0.00 0.00 0.00 3.95
586 596 2.515290 TCGATGACGAGGCGCCTA 60.515 61.111 32.97 15.35 43.81 3.93
587 597 2.353607 CGATGACGAGGCGCCTAC 60.354 66.667 32.97 23.37 42.66 3.18
588 598 2.353607 GATGACGAGGCGCCTACG 60.354 66.667 32.97 32.67 44.07 3.51
589 599 3.825833 GATGACGAGGCGCCTACGG 62.826 68.421 34.97 27.37 40.57 4.02
591 601 4.849329 GACGAGGCGCCTACGGTG 62.849 72.222 34.97 23.88 40.57 4.94
593 603 4.849329 CGAGGCGCCTACGGTGAC 62.849 72.222 32.97 14.51 42.50 3.67
596 606 2.508663 GGCGCCTACGGTGACTTC 60.509 66.667 22.15 0.00 38.38 3.01
597 607 2.879462 GCGCCTACGGTGACTTCG 60.879 66.667 0.00 0.00 40.57 3.79
598 608 2.564975 CGCCTACGGTGACTTCGT 59.435 61.111 0.00 0.00 43.64 3.85
599 609 1.796151 CGCCTACGGTGACTTCGTA 59.204 57.895 0.00 0.00 41.38 3.43
600 610 0.168788 CGCCTACGGTGACTTCGTAA 59.831 55.000 0.00 0.00 41.62 3.18
601 611 1.401409 CGCCTACGGTGACTTCGTAAA 60.401 52.381 0.00 0.00 41.62 2.01
602 612 2.733227 CGCCTACGGTGACTTCGTAAAT 60.733 50.000 0.00 0.00 41.62 1.40
603 613 3.256558 GCCTACGGTGACTTCGTAAATT 58.743 45.455 0.00 0.00 41.62 1.82
604 614 3.681417 GCCTACGGTGACTTCGTAAATTT 59.319 43.478 0.00 0.00 41.62 1.82
605 615 4.152938 GCCTACGGTGACTTCGTAAATTTT 59.847 41.667 0.00 0.00 41.62 1.82
606 616 5.348451 GCCTACGGTGACTTCGTAAATTTTA 59.652 40.000 0.00 0.00 41.62 1.52
607 617 6.128580 GCCTACGGTGACTTCGTAAATTTTAA 60.129 38.462 0.00 0.00 41.62 1.52
608 618 7.450627 CCTACGGTGACTTCGTAAATTTTAAG 58.549 38.462 0.00 1.31 41.62 1.85
609 619 7.329226 CCTACGGTGACTTCGTAAATTTTAAGA 59.671 37.037 12.10 1.32 41.62 2.10
610 620 7.662604 ACGGTGACTTCGTAAATTTTAAGAT 57.337 32.000 12.10 0.00 39.22 2.40
611 621 7.515643 ACGGTGACTTCGTAAATTTTAAGATG 58.484 34.615 12.94 12.94 39.22 2.90
612 622 7.385752 ACGGTGACTTCGTAAATTTTAAGATGA 59.614 33.333 18.20 2.32 39.22 2.92
613 623 8.388103 CGGTGACTTCGTAAATTTTAAGATGAT 58.612 33.333 18.20 8.01 0.00 2.45
619 629 9.318041 CTTCGTAAATTTTAAGATGATATGCCG 57.682 33.333 0.00 0.00 0.00 5.69
620 630 7.802738 TCGTAAATTTTAAGATGATATGCCGG 58.197 34.615 0.00 0.00 0.00 6.13
621 631 6.523201 CGTAAATTTTAAGATGATATGCCGGC 59.477 38.462 22.73 22.73 0.00 6.13
622 632 6.655078 AAATTTTAAGATGATATGCCGGCT 57.345 33.333 29.70 15.76 0.00 5.52
623 633 5.886960 ATTTTAAGATGATATGCCGGCTC 57.113 39.130 29.70 17.89 0.00 4.70
624 634 4.350368 TTTAAGATGATATGCCGGCTCA 57.650 40.909 29.70 23.34 0.00 4.26
625 635 2.469274 AAGATGATATGCCGGCTCAG 57.531 50.000 29.70 0.00 0.00 3.35
626 636 1.346062 AGATGATATGCCGGCTCAGT 58.654 50.000 29.70 13.44 0.00 3.41
627 637 1.274728 AGATGATATGCCGGCTCAGTC 59.725 52.381 29.70 19.55 0.00 3.51
628 638 1.274728 GATGATATGCCGGCTCAGTCT 59.725 52.381 29.70 8.26 0.00 3.24
629 639 0.676184 TGATATGCCGGCTCAGTCTC 59.324 55.000 29.70 15.31 0.00 3.36
630 640 0.965439 GATATGCCGGCTCAGTCTCT 59.035 55.000 29.70 3.16 0.00 3.10
631 641 0.965439 ATATGCCGGCTCAGTCTCTC 59.035 55.000 29.70 0.00 0.00 3.20
632 642 1.448119 TATGCCGGCTCAGTCTCTCG 61.448 60.000 29.70 0.00 0.00 4.04
633 643 3.134792 GCCGGCTCAGTCTCTCGA 61.135 66.667 22.15 0.00 0.00 4.04
634 644 2.701780 GCCGGCTCAGTCTCTCGAA 61.702 63.158 22.15 0.00 0.00 3.71
635 645 1.137825 CCGGCTCAGTCTCTCGAAC 59.862 63.158 0.00 0.00 0.00 3.95
636 646 1.226156 CGGCTCAGTCTCTCGAACG 60.226 63.158 0.00 0.00 0.00 3.95
637 647 1.877367 GGCTCAGTCTCTCGAACGT 59.123 57.895 0.00 0.00 0.00 3.99
638 648 0.455295 GGCTCAGTCTCTCGAACGTG 60.455 60.000 0.00 0.00 0.00 4.49
639 649 1.068287 GCTCAGTCTCTCGAACGTGC 61.068 60.000 0.00 0.00 0.00 5.34
640 650 0.519519 CTCAGTCTCTCGAACGTGCT 59.480 55.000 0.00 0.00 0.00 4.40
641 651 0.517755 TCAGTCTCTCGAACGTGCTC 59.482 55.000 0.00 0.00 0.00 4.26
642 652 0.238553 CAGTCTCTCGAACGTGCTCA 59.761 55.000 0.00 0.00 0.00 4.26
643 653 1.135546 CAGTCTCTCGAACGTGCTCAT 60.136 52.381 0.00 0.00 0.00 2.90
644 654 2.096013 CAGTCTCTCGAACGTGCTCATA 59.904 50.000 0.00 0.00 0.00 2.15
645 655 2.353269 AGTCTCTCGAACGTGCTCATAG 59.647 50.000 0.00 0.00 0.00 2.23
646 656 1.671328 TCTCTCGAACGTGCTCATAGG 59.329 52.381 0.00 0.00 0.00 2.57
647 657 0.738975 TCTCGAACGTGCTCATAGGG 59.261 55.000 0.00 0.00 0.00 3.53
648 658 0.249073 CTCGAACGTGCTCATAGGGG 60.249 60.000 0.00 0.00 0.00 4.79
649 659 0.968901 TCGAACGTGCTCATAGGGGT 60.969 55.000 0.00 0.00 0.00 4.95
650 660 0.742505 CGAACGTGCTCATAGGGGTA 59.257 55.000 0.00 0.00 0.00 3.69
651 661 1.269102 CGAACGTGCTCATAGGGGTAG 60.269 57.143 0.00 0.00 0.00 3.18
652 662 1.068741 GAACGTGCTCATAGGGGTAGG 59.931 57.143 0.00 0.00 0.00 3.18
653 663 0.759436 ACGTGCTCATAGGGGTAGGG 60.759 60.000 0.00 0.00 0.00 3.53
654 664 0.759436 CGTGCTCATAGGGGTAGGGT 60.759 60.000 0.00 0.00 0.00 4.34
655 665 0.759346 GTGCTCATAGGGGTAGGGTG 59.241 60.000 0.00 0.00 0.00 4.61
656 666 0.341961 TGCTCATAGGGGTAGGGTGT 59.658 55.000 0.00 0.00 0.00 4.16
657 667 0.759346 GCTCATAGGGGTAGGGTGTG 59.241 60.000 0.00 0.00 0.00 3.82
658 668 0.759346 CTCATAGGGGTAGGGTGTGC 59.241 60.000 0.00 0.00 0.00 4.57
659 669 1.046472 TCATAGGGGTAGGGTGTGCG 61.046 60.000 0.00 0.00 0.00 5.34
660 670 1.002533 ATAGGGGTAGGGTGTGCGT 59.997 57.895 0.00 0.00 0.00 5.24
661 671 1.335132 ATAGGGGTAGGGTGTGCGTG 61.335 60.000 0.00 0.00 0.00 5.34
664 674 4.675029 GGTAGGGTGTGCGTGCGT 62.675 66.667 0.00 0.00 0.00 5.24
665 675 3.411351 GTAGGGTGTGCGTGCGTG 61.411 66.667 0.00 0.00 0.00 5.34
666 676 3.918977 TAGGGTGTGCGTGCGTGT 61.919 61.111 0.00 0.00 0.00 4.49
669 679 3.871574 GGTGTGCGTGCGTGTGTT 61.872 61.111 0.00 0.00 0.00 3.32
670 680 2.099446 GTGTGCGTGCGTGTGTTT 59.901 55.556 0.00 0.00 0.00 2.83
671 681 1.348938 GTGTGCGTGCGTGTGTTTA 59.651 52.632 0.00 0.00 0.00 2.01
672 682 0.041663 GTGTGCGTGCGTGTGTTTAT 60.042 50.000 0.00 0.00 0.00 1.40
673 683 1.192757 GTGTGCGTGCGTGTGTTTATA 59.807 47.619 0.00 0.00 0.00 0.98
674 684 1.457683 TGTGCGTGCGTGTGTTTATAG 59.542 47.619 0.00 0.00 0.00 1.31
675 685 1.072391 TGCGTGCGTGTGTTTATAGG 58.928 50.000 0.00 0.00 0.00 2.57
676 686 0.372334 GCGTGCGTGTGTTTATAGGG 59.628 55.000 0.00 0.00 0.00 3.53
677 687 1.003851 CGTGCGTGTGTTTATAGGGG 58.996 55.000 0.00 0.00 0.00 4.79
678 688 1.673626 CGTGCGTGTGTTTATAGGGGT 60.674 52.381 0.00 0.00 0.00 4.95
679 689 1.735571 GTGCGTGTGTTTATAGGGGTG 59.264 52.381 0.00 0.00 0.00 4.61
680 690 1.624312 TGCGTGTGTTTATAGGGGTGA 59.376 47.619 0.00 0.00 0.00 4.02
681 691 2.277084 GCGTGTGTTTATAGGGGTGAG 58.723 52.381 0.00 0.00 0.00 3.51
682 692 2.354403 GCGTGTGTTTATAGGGGTGAGT 60.354 50.000 0.00 0.00 0.00 3.41
683 693 3.259064 CGTGTGTTTATAGGGGTGAGTG 58.741 50.000 0.00 0.00 0.00 3.51
684 694 3.306502 CGTGTGTTTATAGGGGTGAGTGT 60.307 47.826 0.00 0.00 0.00 3.55
685 695 4.082081 CGTGTGTTTATAGGGGTGAGTGTA 60.082 45.833 0.00 0.00 0.00 2.90
686 696 5.394883 CGTGTGTTTATAGGGGTGAGTGTAT 60.395 44.000 0.00 0.00 0.00 2.29
687 697 5.815740 GTGTGTTTATAGGGGTGAGTGTATG 59.184 44.000 0.00 0.00 0.00 2.39
688 698 4.814771 GTGTTTATAGGGGTGAGTGTATGC 59.185 45.833 0.00 0.00 0.00 3.14
689 699 4.056050 GTTTATAGGGGTGAGTGTATGCG 58.944 47.826 0.00 0.00 0.00 4.73
690 700 0.393077 ATAGGGGTGAGTGTATGCGC 59.607 55.000 0.00 0.00 0.00 6.09
691 701 2.011741 TAGGGGTGAGTGTATGCGCG 62.012 60.000 0.00 0.00 0.00 6.86
692 702 2.125673 GGGTGAGTGTATGCGCGT 60.126 61.111 8.43 7.55 0.00 6.01
693 703 2.452813 GGGTGAGTGTATGCGCGTG 61.453 63.158 13.61 0.00 0.00 5.34
694 704 1.736645 GGTGAGTGTATGCGCGTGT 60.737 57.895 13.61 0.00 0.00 4.49
695 705 0.457166 GGTGAGTGTATGCGCGTGTA 60.457 55.000 13.61 0.00 0.00 2.90
696 706 1.556564 GTGAGTGTATGCGCGTGTAT 58.443 50.000 13.61 4.63 0.00 2.29
697 707 2.542205 GGTGAGTGTATGCGCGTGTATA 60.542 50.000 13.61 2.40 0.00 1.47
698 708 3.305964 GTGAGTGTATGCGCGTGTATAT 58.694 45.455 13.61 0.00 0.00 0.86
699 709 3.119628 GTGAGTGTATGCGCGTGTATATG 59.880 47.826 13.61 0.00 0.00 1.78
700 710 3.003897 TGAGTGTATGCGCGTGTATATGA 59.996 43.478 13.61 0.00 0.00 2.15
701 711 3.565516 AGTGTATGCGCGTGTATATGAG 58.434 45.455 13.61 0.00 0.00 2.90
702 712 3.004419 AGTGTATGCGCGTGTATATGAGT 59.996 43.478 13.61 1.18 0.00 3.41
703 713 3.119628 GTGTATGCGCGTGTATATGAGTG 59.880 47.826 13.61 0.00 0.00 3.51
704 714 1.139989 ATGCGCGTGTATATGAGTGC 58.860 50.000 8.43 3.80 40.17 4.40
705 715 0.102300 TGCGCGTGTATATGAGTGCT 59.898 50.000 8.43 0.00 40.38 4.40
706 716 1.209128 GCGCGTGTATATGAGTGCTT 58.791 50.000 8.43 0.00 37.18 3.91
707 717 1.071239 GCGCGTGTATATGAGTGCTTG 60.071 52.381 8.43 0.00 37.18 4.01
708 718 2.193447 CGCGTGTATATGAGTGCTTGT 58.807 47.619 0.00 0.00 0.00 3.16
709 719 2.034591 CGCGTGTATATGAGTGCTTGTG 60.035 50.000 0.00 0.00 0.00 3.33
710 720 2.930040 GCGTGTATATGAGTGCTTGTGT 59.070 45.455 0.00 0.00 0.00 3.72
711 721 3.000322 GCGTGTATATGAGTGCTTGTGTC 60.000 47.826 0.00 0.00 0.00 3.67
712 722 4.424626 CGTGTATATGAGTGCTTGTGTCT 58.575 43.478 0.00 0.00 0.00 3.41
713 723 4.266265 CGTGTATATGAGTGCTTGTGTCTG 59.734 45.833 0.00 0.00 0.00 3.51
714 724 5.171476 GTGTATATGAGTGCTTGTGTCTGT 58.829 41.667 0.00 0.00 0.00 3.41
715 725 6.330278 GTGTATATGAGTGCTTGTGTCTGTA 58.670 40.000 0.00 0.00 0.00 2.74
716 726 6.253727 GTGTATATGAGTGCTTGTGTCTGTAC 59.746 42.308 0.00 0.00 0.00 2.90
717 727 5.667539 ATATGAGTGCTTGTGTCTGTACT 57.332 39.130 0.00 0.00 32.11 2.73
718 728 3.097877 TGAGTGCTTGTGTCTGTACTG 57.902 47.619 0.00 0.00 29.71 2.74
719 729 2.693074 TGAGTGCTTGTGTCTGTACTGA 59.307 45.455 0.00 0.00 29.71 3.41
720 730 3.321968 TGAGTGCTTGTGTCTGTACTGAT 59.678 43.478 5.69 0.00 29.71 2.90
721 731 3.657634 AGTGCTTGTGTCTGTACTGATG 58.342 45.455 5.69 0.00 0.00 3.07
722 732 2.158449 GTGCTTGTGTCTGTACTGATGC 59.842 50.000 5.69 6.69 0.00 3.91
723 733 2.037641 TGCTTGTGTCTGTACTGATGCT 59.962 45.455 5.69 0.00 0.00 3.79
724 734 3.258123 TGCTTGTGTCTGTACTGATGCTA 59.742 43.478 5.69 0.00 0.00 3.49
725 735 4.245660 GCTTGTGTCTGTACTGATGCTAA 58.754 43.478 5.69 0.07 0.00 3.09
726 736 4.690748 GCTTGTGTCTGTACTGATGCTAAA 59.309 41.667 5.69 0.00 0.00 1.85
727 737 5.179368 GCTTGTGTCTGTACTGATGCTAAAA 59.821 40.000 5.69 0.00 0.00 1.52
728 738 6.293407 GCTTGTGTCTGTACTGATGCTAAAAA 60.293 38.462 5.69 0.00 0.00 1.94
861 877 2.032681 GCCGTGCTTTCTCCACCT 59.967 61.111 0.00 0.00 0.00 4.00
969 1853 2.680841 CCCGAAGTCAAACAACAGACAA 59.319 45.455 0.00 0.00 37.23 3.18
1772 2676 0.695347 CCTCTGTTTCCTGAAGGCCT 59.305 55.000 0.00 0.00 34.44 5.19
1773 2677 1.074566 CCTCTGTTTCCTGAAGGCCTT 59.925 52.381 20.65 20.65 34.44 4.35
1774 2678 2.489802 CCTCTGTTTCCTGAAGGCCTTT 60.490 50.000 21.54 2.85 34.44 3.11
1775 2679 3.225940 CTCTGTTTCCTGAAGGCCTTTT 58.774 45.455 21.54 0.00 34.44 2.27
1776 2680 3.638627 CTCTGTTTCCTGAAGGCCTTTTT 59.361 43.478 21.54 0.00 34.44 1.94
1803 2707 5.964887 TTTTGCTTCGTTTTTCCTGAATG 57.035 34.783 0.00 0.00 0.00 2.67
1864 2776 0.801251 GCTGCTGTCACCTTGATGTC 59.199 55.000 0.00 0.00 0.00 3.06
1873 2787 2.456119 CCTTGATGTCGTGGCGAGC 61.456 63.158 0.00 0.00 36.23 5.03
1874 2788 2.792290 CTTGATGTCGTGGCGAGCG 61.792 63.158 0.00 0.00 36.23 5.03
1910 2824 4.950926 CGTAGCTTTGAGTTGTCATCTTG 58.049 43.478 0.00 0.00 30.85 3.02
1911 2825 4.686091 CGTAGCTTTGAGTTGTCATCTTGA 59.314 41.667 0.00 0.00 30.85 3.02
1912 2826 5.349817 CGTAGCTTTGAGTTGTCATCTTGAT 59.650 40.000 0.00 0.00 30.85 2.57
1913 2827 5.624344 AGCTTTGAGTTGTCATCTTGATG 57.376 39.130 4.35 4.35 30.85 3.07
1914 2828 5.311265 AGCTTTGAGTTGTCATCTTGATGA 58.689 37.500 9.02 9.02 30.85 2.92
1915 2829 5.411977 AGCTTTGAGTTGTCATCTTGATGAG 59.588 40.000 12.95 1.08 30.85 2.90
1916 2830 5.410746 GCTTTGAGTTGTCATCTTGATGAGA 59.589 40.000 12.95 9.61 39.13 3.27
1955 2869 2.261172 TATGAGTCGTGGCCGTGTCG 62.261 60.000 0.00 0.18 35.01 4.35
2027 2945 6.393720 TGCATCGTATCATAATGATTCGTG 57.606 37.500 0.00 0.00 44.42 4.35
2067 2990 2.238847 GATGGCACGGCTGGAGTACA 62.239 60.000 0.00 0.00 0.00 2.90
2098 3021 5.463061 CCATTTATGCAGGAAAATTAAGGCG 59.537 40.000 0.00 0.00 0.00 5.52
2129 3052 1.225855 CAGCGTTGCTAACAGGTTGA 58.774 50.000 0.00 0.00 36.40 3.18
2130 3053 1.806542 CAGCGTTGCTAACAGGTTGAT 59.193 47.619 0.00 0.00 36.40 2.57
2131 3054 2.226437 CAGCGTTGCTAACAGGTTGATT 59.774 45.455 0.00 0.00 36.40 2.57
2132 3055 2.884639 AGCGTTGCTAACAGGTTGATTT 59.115 40.909 0.00 0.00 36.99 2.17
2133 3056 2.979813 GCGTTGCTAACAGGTTGATTTG 59.020 45.455 0.00 0.00 0.00 2.32
2135 3058 3.549827 CGTTGCTAACAGGTTGATTTGCA 60.550 43.478 0.00 0.00 35.29 4.08
2136 3059 3.641437 TGCTAACAGGTTGATTTGCAC 57.359 42.857 0.00 0.00 32.78 4.57
2137 3060 2.031245 TGCTAACAGGTTGATTTGCACG 60.031 45.455 0.00 0.00 32.78 5.34
2140 3063 1.080569 CAGGTTGATTTGCACGGCC 60.081 57.895 0.00 0.00 0.00 6.13
2141 3064 1.530419 AGGTTGATTTGCACGGCCA 60.530 52.632 2.24 0.00 0.00 5.36
2142 3065 1.080569 GGTTGATTTGCACGGCCAG 60.081 57.895 2.24 0.00 0.00 4.85
2151 3074 2.972505 CACGGCCAGTGGACACAC 60.973 66.667 17.32 0.00 46.77 3.82
2167 3090 8.673626 GTGGACACACAGTGAATTAATTAATG 57.326 34.615 11.42 3.13 46.90 1.90
2169 3092 8.511321 TGGACACACAGTGAATTAATTAATGAC 58.489 33.333 11.42 10.94 36.96 3.06
2170 3093 8.511321 GGACACACAGTGAATTAATTAATGACA 58.489 33.333 11.42 11.59 36.96 3.58
2171 3094 9.891828 GACACACAGTGAATTAATTAATGACAA 57.108 29.630 11.42 0.00 36.96 3.18
2209 3132 6.974932 GAGTATCTCTTGAATTGTCAGCAA 57.025 37.500 0.00 0.00 39.16 3.91
2210 3133 6.981762 AGTATCTCTTGAATTGTCAGCAAG 57.018 37.500 0.00 0.00 40.16 4.01
2211 3134 6.705302 AGTATCTCTTGAATTGTCAGCAAGA 58.295 36.000 0.00 0.00 43.95 3.02
2223 3146 4.789095 GTCAGCAAGACTAACGTCAAAA 57.211 40.909 0.00 0.00 44.09 2.44
2225 3148 4.033587 GTCAGCAAGACTAACGTCAAAACA 59.966 41.667 0.00 0.00 44.09 2.83
2226 3149 4.033587 TCAGCAAGACTAACGTCAAAACAC 59.966 41.667 0.00 0.00 42.73 3.32
2227 3150 3.936453 AGCAAGACTAACGTCAAAACACA 59.064 39.130 0.00 0.00 42.73 3.72
2228 3151 4.034048 AGCAAGACTAACGTCAAAACACAG 59.966 41.667 0.00 0.00 42.73 3.66
2229 3152 4.033587 GCAAGACTAACGTCAAAACACAGA 59.966 41.667 0.00 0.00 42.73 3.41
2233 3533 4.255301 ACTAACGTCAAAACACAGACCAA 58.745 39.130 0.00 0.00 0.00 3.67
2243 3543 7.170828 GTCAAAACACAGACCAACTTTTCTTTT 59.829 33.333 0.00 0.00 0.00 2.27
2244 3544 7.383843 TCAAAACACAGACCAACTTTTCTTTTC 59.616 33.333 0.00 0.00 0.00 2.29
2245 3545 6.590234 AACACAGACCAACTTTTCTTTTCT 57.410 33.333 0.00 0.00 0.00 2.52
2246 3546 6.196079 ACACAGACCAACTTTTCTTTTCTC 57.804 37.500 0.00 0.00 0.00 2.87
2248 3548 6.378280 ACACAGACCAACTTTTCTTTTCTCAT 59.622 34.615 0.00 0.00 0.00 2.90
2249 3549 6.914757 CACAGACCAACTTTTCTTTTCTCATC 59.085 38.462 0.00 0.00 0.00 2.92
2251 3551 7.012799 ACAGACCAACTTTTCTTTTCTCATCTC 59.987 37.037 0.00 0.00 0.00 2.75
2252 3552 6.488344 AGACCAACTTTTCTTTTCTCATCTCC 59.512 38.462 0.00 0.00 0.00 3.71
2253 3553 6.368805 ACCAACTTTTCTTTTCTCATCTCCT 58.631 36.000 0.00 0.00 0.00 3.69
2255 3555 7.343057 ACCAACTTTTCTTTTCTCATCTCCTTT 59.657 33.333 0.00 0.00 0.00 3.11
2256 3556 8.850156 CCAACTTTTCTTTTCTCATCTCCTTTA 58.150 33.333 0.00 0.00 0.00 1.85
2265 4326 9.323985 CTTTTCTCATCTCCTTTATAACCAGAG 57.676 37.037 0.00 0.00 0.00 3.35
2335 4396 5.091261 ACCATGCGAAAGAAGAGATAACT 57.909 39.130 0.00 0.00 0.00 2.24
2336 4397 5.491982 ACCATGCGAAAGAAGAGATAACTT 58.508 37.500 0.00 0.00 0.00 2.66
2337 4398 5.352569 ACCATGCGAAAGAAGAGATAACTTG 59.647 40.000 0.00 0.00 0.00 3.16
2340 4401 5.171476 TGCGAAAGAAGAGATAACTTGGAG 58.829 41.667 0.00 0.00 0.00 3.86
2341 4402 5.047306 TGCGAAAGAAGAGATAACTTGGAGA 60.047 40.000 0.00 0.00 0.00 3.71
2342 4403 6.045955 GCGAAAGAAGAGATAACTTGGAGAT 58.954 40.000 0.00 0.00 0.00 2.75
2343 4404 6.200097 GCGAAAGAAGAGATAACTTGGAGATC 59.800 42.308 0.00 0.00 0.00 2.75
2344 4405 6.699642 CGAAAGAAGAGATAACTTGGAGATCC 59.300 42.308 0.00 0.00 0.00 3.36
2358 4419 5.667539 TGGAGATCCAGTGAAGTTAAGAG 57.332 43.478 0.00 0.00 42.01 2.85
2359 4420 4.081420 TGGAGATCCAGTGAAGTTAAGAGC 60.081 45.833 0.00 0.00 42.01 4.09
2363 4424 7.187824 AGATCCAGTGAAGTTAAGAGCAATA 57.812 36.000 0.00 0.00 0.00 1.90
2367 4428 6.430000 TCCAGTGAAGTTAAGAGCAATAAACC 59.570 38.462 0.00 0.00 0.00 3.27
2372 4433 9.162764 GTGAAGTTAAGAGCAATAAACCATCTA 57.837 33.333 0.00 0.00 0.00 1.98
2375 4436 9.905713 AAGTTAAGAGCAATAAACCATCTATCA 57.094 29.630 0.00 0.00 0.00 2.15
2388 4449 3.672397 CCATCTATCAGAATGCGAAGTCG 59.328 47.826 0.00 0.00 43.27 4.18
2391 4452 5.494632 TCTATCAGAATGCGAAGTCGTTA 57.505 39.130 2.25 0.00 42.22 3.18
2394 4455 3.242518 TCAGAATGCGAAGTCGTTACAG 58.757 45.455 2.25 0.00 42.22 2.74
2401 4462 3.922240 TGCGAAGTCGTTACAGATTAACC 59.078 43.478 2.25 0.00 42.22 2.85
2402 4463 3.922240 GCGAAGTCGTTACAGATTAACCA 59.078 43.478 2.25 0.00 42.22 3.67
2403 4464 4.031426 GCGAAGTCGTTACAGATTAACCAG 59.969 45.833 2.25 0.00 42.22 4.00
2405 4466 3.508762 AGTCGTTACAGATTAACCAGCG 58.491 45.455 0.00 0.00 0.00 5.18
2421 4482 0.533032 AGCGAGGTTGTAGAGAAGCC 59.467 55.000 0.00 0.00 0.00 4.35
2425 4486 2.180276 GAGGTTGTAGAGAAGCCCTGA 58.820 52.381 0.00 0.00 0.00 3.86
2436 4497 4.080129 AGAGAAGCCCTGATCATGCTTTTA 60.080 41.667 24.98 0.00 44.83 1.52
2445 4506 4.406456 TGATCATGCTTTTACACCAACCT 58.594 39.130 0.00 0.00 0.00 3.50
2454 4515 5.064834 GCTTTTACACCAACCTAGCATAGAC 59.935 44.000 0.00 0.00 42.77 2.59
2456 4517 2.453521 ACACCAACCTAGCATAGACGA 58.546 47.619 0.00 0.00 42.77 4.20
2460 4521 2.474816 CAACCTAGCATAGACGAAGCC 58.525 52.381 0.00 0.00 42.77 4.35
2466 4529 3.334583 AGCATAGACGAAGCCAGAAAA 57.665 42.857 0.00 0.00 0.00 2.29
2489 4552 2.029020 AGAGAGTAGCATTGTTGACGCA 60.029 45.455 0.00 0.00 0.00 5.24
2490 4553 2.069273 AGAGTAGCATTGTTGACGCAC 58.931 47.619 0.00 0.00 0.00 5.34
2491 4554 1.128692 GAGTAGCATTGTTGACGCACC 59.871 52.381 0.00 0.00 0.00 5.01
2546 4609 6.985188 TGACTTGTATGTAAAAGAGATGGC 57.015 37.500 0.00 0.00 0.00 4.40
2578 4641 0.178068 GCAGGCTAACCGGAGATTCA 59.822 55.000 9.46 0.00 42.76 2.57
2582 4645 1.209747 GGCTAACCGGAGATTCAACCT 59.790 52.381 9.46 0.00 0.00 3.50
2583 4646 2.552031 GCTAACCGGAGATTCAACCTC 58.448 52.381 9.46 0.00 0.00 3.85
2584 4647 2.810650 CTAACCGGAGATTCAACCTCG 58.189 52.381 9.46 0.00 0.00 4.63
2585 4648 0.974383 AACCGGAGATTCAACCTCGT 59.026 50.000 9.46 0.00 0.00 4.18
2586 4649 0.531200 ACCGGAGATTCAACCTCGTC 59.469 55.000 9.46 0.00 0.00 4.20
2587 4650 0.179108 CCGGAGATTCAACCTCGTCC 60.179 60.000 0.00 0.00 0.00 4.79
2588 4651 0.179108 CGGAGATTCAACCTCGTCCC 60.179 60.000 0.00 0.00 0.00 4.46
2589 4652 0.902531 GGAGATTCAACCTCGTCCCA 59.097 55.000 0.00 0.00 0.00 4.37
2590 4653 1.486726 GGAGATTCAACCTCGTCCCAT 59.513 52.381 0.00 0.00 0.00 4.00
2591 4654 2.698797 GGAGATTCAACCTCGTCCCATA 59.301 50.000 0.00 0.00 0.00 2.74
2592 4655 3.134081 GGAGATTCAACCTCGTCCCATAA 59.866 47.826 0.00 0.00 0.00 1.90
2593 4656 4.202367 GGAGATTCAACCTCGTCCCATAAT 60.202 45.833 0.00 0.00 0.00 1.28
2594 4657 5.011738 GGAGATTCAACCTCGTCCCATAATA 59.988 44.000 0.00 0.00 0.00 0.98
2595 4658 6.295916 GGAGATTCAACCTCGTCCCATAATAT 60.296 42.308 0.00 0.00 0.00 1.28
2596 4659 7.093465 GGAGATTCAACCTCGTCCCATAATATA 60.093 40.741 0.00 0.00 0.00 0.86
2597 4660 7.612677 AGATTCAACCTCGTCCCATAATATAC 58.387 38.462 0.00 0.00 0.00 1.47
2598 4661 6.734502 TTCAACCTCGTCCCATAATATACA 57.265 37.500 0.00 0.00 0.00 2.29
2599 4662 6.928348 TCAACCTCGTCCCATAATATACAT 57.072 37.500 0.00 0.00 0.00 2.29
2600 4663 6.931838 TCAACCTCGTCCCATAATATACATC 58.068 40.000 0.00 0.00 0.00 3.06
2601 4664 6.724441 TCAACCTCGTCCCATAATATACATCT 59.276 38.462 0.00 0.00 0.00 2.90
2602 4665 7.234782 TCAACCTCGTCCCATAATATACATCTT 59.765 37.037 0.00 0.00 0.00 2.40
2603 4666 8.528643 CAACCTCGTCCCATAATATACATCTTA 58.471 37.037 0.00 0.00 0.00 2.10
2604 4667 8.840200 ACCTCGTCCCATAATATACATCTTAT 57.160 34.615 0.00 0.00 0.00 1.73
2605 4668 9.268282 ACCTCGTCCCATAATATACATCTTATT 57.732 33.333 0.00 0.00 0.00 1.40
2606 4669 9.534565 CCTCGTCCCATAATATACATCTTATTG 57.465 37.037 0.00 0.00 0.00 1.90
2607 4670 8.942338 TCGTCCCATAATATACATCTTATTGC 57.058 34.615 0.00 0.00 0.00 3.56
2608 4671 8.536175 TCGTCCCATAATATACATCTTATTGCA 58.464 33.333 0.00 0.00 0.00 4.08
2609 4672 9.330063 CGTCCCATAATATACATCTTATTGCAT 57.670 33.333 0.00 0.00 0.00 3.96
2611 4674 9.851686 TCCCATAATATACATCTTATTGCATCC 57.148 33.333 0.00 0.00 0.00 3.51
2612 4675 9.631257 CCCATAATATACATCTTATTGCATCCA 57.369 33.333 0.00 0.00 0.00 3.41
2619 4682 5.362263 ACATCTTATTGCATCCAATTTGGC 58.638 37.500 10.76 0.00 41.68 4.52
2620 4683 5.129815 ACATCTTATTGCATCCAATTTGGCT 59.870 36.000 10.76 0.00 41.68 4.75
2621 4684 5.266733 TCTTATTGCATCCAATTTGGCTC 57.733 39.130 10.76 2.98 41.68 4.70
2622 4685 2.589798 ATTGCATCCAATTTGGCTCG 57.410 45.000 10.76 2.76 38.49 5.03
2623 4686 0.531657 TTGCATCCAATTTGGCTCGG 59.468 50.000 10.76 1.46 37.47 4.63
2624 4687 0.323269 TGCATCCAATTTGGCTCGGA 60.323 50.000 10.76 0.04 37.47 4.55
2625 4688 0.383231 GCATCCAATTTGGCTCGGAG 59.617 55.000 10.76 0.00 37.47 4.63
2626 4689 1.027357 CATCCAATTTGGCTCGGAGG 58.973 55.000 10.76 0.00 37.47 4.30
2627 4690 0.106519 ATCCAATTTGGCTCGGAGGG 60.107 55.000 10.76 0.00 37.47 4.30
2628 4691 1.204786 TCCAATTTGGCTCGGAGGGA 61.205 55.000 10.76 0.00 37.47 4.20
2629 4692 0.749454 CCAATTTGGCTCGGAGGGAG 60.749 60.000 7.20 0.00 46.06 4.30
2630 4693 0.035056 CAATTTGGCTCGGAGGGAGT 60.035 55.000 7.20 0.00 45.03 3.85
2631 4694 0.035056 AATTTGGCTCGGAGGGAGTG 60.035 55.000 7.20 0.00 45.03 3.51
2632 4695 1.201429 ATTTGGCTCGGAGGGAGTGT 61.201 55.000 7.20 0.00 45.03 3.55
2633 4696 1.827399 TTTGGCTCGGAGGGAGTGTC 61.827 60.000 7.20 0.00 45.03 3.67
2634 4697 2.363147 GGCTCGGAGGGAGTGTCT 60.363 66.667 7.20 0.00 45.03 3.41
2635 4698 1.076923 GGCTCGGAGGGAGTGTCTA 60.077 63.158 7.20 0.00 45.03 2.59
2636 4699 0.683504 GGCTCGGAGGGAGTGTCTAA 60.684 60.000 7.20 0.00 45.03 2.10
2637 4700 0.741915 GCTCGGAGGGAGTGTCTAAG 59.258 60.000 7.20 0.00 45.03 2.18
2638 4701 1.956159 GCTCGGAGGGAGTGTCTAAGT 60.956 57.143 7.20 0.00 45.03 2.24
2639 4702 2.683152 GCTCGGAGGGAGTGTCTAAGTA 60.683 54.545 7.20 0.00 45.03 2.24
2640 4703 3.207778 CTCGGAGGGAGTGTCTAAGTAG 58.792 54.545 0.00 0.00 38.02 2.57
2641 4704 2.575279 TCGGAGGGAGTGTCTAAGTAGT 59.425 50.000 0.00 0.00 0.00 2.73
2642 4705 3.776969 TCGGAGGGAGTGTCTAAGTAGTA 59.223 47.826 0.00 0.00 0.00 1.82
2643 4706 3.876320 CGGAGGGAGTGTCTAAGTAGTAC 59.124 52.174 0.00 0.00 0.00 2.73
2644 4707 4.206375 GGAGGGAGTGTCTAAGTAGTACC 58.794 52.174 0.00 0.00 0.00 3.34
2645 4708 4.206375 GAGGGAGTGTCTAAGTAGTACCC 58.794 52.174 0.00 0.00 35.53 3.69
2646 4709 3.053019 AGGGAGTGTCTAAGTAGTACCCC 60.053 52.174 0.00 0.00 35.87 4.95
2647 4710 2.948315 GGAGTGTCTAAGTAGTACCCCG 59.052 54.545 0.00 0.00 0.00 5.73
2648 4711 3.615155 GAGTGTCTAAGTAGTACCCCGT 58.385 50.000 0.00 0.00 0.00 5.28
2649 4712 3.615155 AGTGTCTAAGTAGTACCCCGTC 58.385 50.000 0.00 0.00 0.00 4.79
2650 4713 2.685388 GTGTCTAAGTAGTACCCCGTCC 59.315 54.545 0.00 0.00 0.00 4.79
2651 4714 2.302260 GTCTAAGTAGTACCCCGTCCC 58.698 57.143 0.00 0.00 0.00 4.46
2652 4715 1.922447 TCTAAGTAGTACCCCGTCCCA 59.078 52.381 0.00 0.00 0.00 4.37
2653 4716 2.515429 TCTAAGTAGTACCCCGTCCCAT 59.485 50.000 0.00 0.00 0.00 4.00
2654 4717 3.721575 TCTAAGTAGTACCCCGTCCCATA 59.278 47.826 0.00 0.00 0.00 2.74
2655 4718 3.403228 AAGTAGTACCCCGTCCCATAA 57.597 47.619 0.00 0.00 0.00 1.90
2656 4719 3.625252 AGTAGTACCCCGTCCCATAAT 57.375 47.619 0.00 0.00 0.00 1.28
2657 4720 4.747265 AGTAGTACCCCGTCCCATAATA 57.253 45.455 0.00 0.00 0.00 0.98
2658 4721 5.280998 AGTAGTACCCCGTCCCATAATAT 57.719 43.478 0.00 0.00 0.00 1.28
2659 4722 6.407320 AGTAGTACCCCGTCCCATAATATA 57.593 41.667 0.00 0.00 0.00 0.86
2660 4723 6.804083 AGTAGTACCCCGTCCCATAATATAA 58.196 40.000 0.00 0.00 0.00 0.98
2661 4724 6.894103 AGTAGTACCCCGTCCCATAATATAAG 59.106 42.308 0.00 0.00 0.00 1.73
2662 4725 5.907421 AGTACCCCGTCCCATAATATAAGA 58.093 41.667 0.00 0.00 0.00 2.10
2663 4726 5.956563 AGTACCCCGTCCCATAATATAAGAG 59.043 44.000 0.00 0.00 0.00 2.85
2664 4727 3.518303 ACCCCGTCCCATAATATAAGAGC 59.482 47.826 0.00 0.00 0.00 4.09
2665 4728 3.430374 CCCCGTCCCATAATATAAGAGCG 60.430 52.174 0.00 0.00 0.00 5.03
2666 4729 3.187700 CCGTCCCATAATATAAGAGCGC 58.812 50.000 0.00 0.00 0.00 5.92
2667 4730 3.119101 CCGTCCCATAATATAAGAGCGCT 60.119 47.826 11.27 11.27 0.00 5.92
2668 4731 4.495422 CGTCCCATAATATAAGAGCGCTT 58.505 43.478 13.26 8.09 38.15 4.68
2669 4732 4.929808 CGTCCCATAATATAAGAGCGCTTT 59.070 41.667 13.26 1.42 35.56 3.51
2670 4733 5.163953 CGTCCCATAATATAAGAGCGCTTTG 60.164 44.000 13.26 0.00 35.56 2.77
2671 4734 5.932303 GTCCCATAATATAAGAGCGCTTTGA 59.068 40.000 13.26 0.00 35.56 2.69
2672 4735 5.932303 TCCCATAATATAAGAGCGCTTTGAC 59.068 40.000 13.26 0.00 35.56 3.18
2673 4736 5.700832 CCCATAATATAAGAGCGCTTTGACA 59.299 40.000 13.26 0.00 35.56 3.58
2674 4737 6.347725 CCCATAATATAAGAGCGCTTTGACAC 60.348 42.308 13.26 0.00 35.56 3.67
2675 4738 6.425114 CCATAATATAAGAGCGCTTTGACACT 59.575 38.462 13.26 0.00 35.56 3.55
2676 4739 7.598869 CCATAATATAAGAGCGCTTTGACACTA 59.401 37.037 13.26 0.00 35.56 2.74
2677 4740 8.642885 CATAATATAAGAGCGCTTTGACACTAG 58.357 37.037 13.26 0.00 35.56 2.57
2678 4741 2.821991 AAGAGCGCTTTGACACTAGT 57.178 45.000 13.26 0.00 0.00 2.57
2679 4742 3.936372 AAGAGCGCTTTGACACTAGTA 57.064 42.857 13.26 0.00 0.00 1.82
2680 4743 3.495670 AGAGCGCTTTGACACTAGTAG 57.504 47.619 13.26 0.00 0.00 2.57
2681 4744 1.921230 GAGCGCTTTGACACTAGTAGC 59.079 52.381 13.26 0.00 0.00 3.58
2682 4745 1.546476 AGCGCTTTGACACTAGTAGCT 59.454 47.619 2.64 0.00 0.00 3.32
2683 4746 1.656095 GCGCTTTGACACTAGTAGCTG 59.344 52.381 11.73 7.29 0.00 4.24
2684 4747 2.671351 GCGCTTTGACACTAGTAGCTGA 60.671 50.000 11.73 0.00 0.00 4.26
2685 4748 3.775202 CGCTTTGACACTAGTAGCTGAT 58.225 45.455 11.73 0.00 0.00 2.90
2686 4749 4.733815 GCGCTTTGACACTAGTAGCTGATA 60.734 45.833 11.73 0.00 0.00 2.15
2687 4750 4.973051 CGCTTTGACACTAGTAGCTGATAG 59.027 45.833 11.73 0.47 0.00 2.08
2688 4751 5.449314 CGCTTTGACACTAGTAGCTGATAGT 60.449 44.000 11.73 1.20 32.44 2.12
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 3.327404 GGAAGACAAGGGGCCCGA 61.327 66.667 18.95 0.00 0.00 5.14
28 29 2.035783 GGTGGAAGACAAGGGGCC 59.964 66.667 0.00 0.00 0.00 5.80
29 30 2.359975 CGGTGGAAGACAAGGGGC 60.360 66.667 0.00 0.00 0.00 5.80
47 48 2.151202 GTTCCTTCTTGACGGATTGCA 58.849 47.619 0.00 0.00 0.00 4.08
56 57 2.286365 ATTTGCGGGTTCCTTCTTGA 57.714 45.000 0.00 0.00 0.00 3.02
61 62 2.891191 TCCTTATTTGCGGGTTCCTT 57.109 45.000 0.00 0.00 0.00 3.36
66 67 1.276989 TCGTCTTCCTTATTTGCGGGT 59.723 47.619 0.00 0.00 0.00 5.28
70 71 1.062148 GCCGTCGTCTTCCTTATTTGC 59.938 52.381 0.00 0.00 0.00 3.68
72 73 2.754946 TGCCGTCGTCTTCCTTATTT 57.245 45.000 0.00 0.00 0.00 1.40
73 74 2.798499 CGATGCCGTCGTCTTCCTTATT 60.798 50.000 0.00 0.00 45.19 1.40
75 76 0.099968 CGATGCCGTCGTCTTCCTTA 59.900 55.000 0.00 0.00 45.19 2.69
89 90 1.723870 GCCCAGTTGATGTCGATGC 59.276 57.895 0.00 0.00 0.00 3.91
117 119 3.027675 GCAACGGGTCCTACTCCCC 62.028 68.421 0.00 0.00 41.78 4.81
140 142 1.160329 CGGATTTCGTCATCAGGGCC 61.160 60.000 0.00 0.00 0.00 5.80
145 147 2.162809 TCGAACTCGGATTTCGTCATCA 59.837 45.455 23.75 7.35 44.92 3.07
186 188 0.387929 ACGAGCACCGAGTTCTGAAA 59.612 50.000 5.53 0.00 41.76 2.69
191 193 1.006571 TTGGACGAGCACCGAGTTC 60.007 57.895 5.53 0.00 41.76 3.01
256 258 2.048222 CCGCTCTTGCTTGACGGA 60.048 61.111 0.00 0.00 46.71 4.69
338 347 5.465390 TGAATTTGTACAAAGACGAGGTGAG 59.535 40.000 24.22 0.00 33.32 3.51
344 353 9.047371 TCATTTAGTGAATTTGTACAAAGACGA 57.953 29.630 24.22 14.35 32.78 4.20
364 373 9.677567 GTTTGTTCAAATTGTAGAGCTCATTTA 57.322 29.630 17.77 0.00 0.00 1.40
369 378 7.327032 GGATTGTTTGTTCAAATTGTAGAGCTC 59.673 37.037 5.27 5.27 0.00 4.09
423 433 3.620488 ACCACAGGTTGATTCGCAATAT 58.380 40.909 0.00 0.00 39.03 1.28
424 434 3.066291 ACCACAGGTTGATTCGCAATA 57.934 42.857 0.00 0.00 39.03 1.90
425 435 1.909700 ACCACAGGTTGATTCGCAAT 58.090 45.000 0.00 0.00 39.03 3.56
426 436 1.686355 AACCACAGGTTGATTCGCAA 58.314 45.000 0.00 0.00 45.07 4.85
427 437 3.412722 AACCACAGGTTGATTCGCA 57.587 47.368 0.00 0.00 45.07 5.10
436 446 2.158667 CCTAACCAACTCAACCACAGGT 60.159 50.000 0.00 0.00 37.65 4.00
437 447 2.158667 ACCTAACCAACTCAACCACAGG 60.159 50.000 0.00 0.00 0.00 4.00
438 448 2.878406 CACCTAACCAACTCAACCACAG 59.122 50.000 0.00 0.00 0.00 3.66
439 449 2.422235 CCACCTAACCAACTCAACCACA 60.422 50.000 0.00 0.00 0.00 4.17
440 450 2.158726 TCCACCTAACCAACTCAACCAC 60.159 50.000 0.00 0.00 0.00 4.16
441 451 2.128535 TCCACCTAACCAACTCAACCA 58.871 47.619 0.00 0.00 0.00 3.67
442 452 2.158726 TGTCCACCTAACCAACTCAACC 60.159 50.000 0.00 0.00 0.00 3.77
443 453 3.139077 CTGTCCACCTAACCAACTCAAC 58.861 50.000 0.00 0.00 0.00 3.18
444 454 2.775384 ACTGTCCACCTAACCAACTCAA 59.225 45.455 0.00 0.00 0.00 3.02
445 455 2.104111 CACTGTCCACCTAACCAACTCA 59.896 50.000 0.00 0.00 0.00 3.41
446 456 2.550208 CCACTGTCCACCTAACCAACTC 60.550 54.545 0.00 0.00 0.00 3.01
447 457 1.420138 CCACTGTCCACCTAACCAACT 59.580 52.381 0.00 0.00 0.00 3.16
448 458 1.142262 ACCACTGTCCACCTAACCAAC 59.858 52.381 0.00 0.00 0.00 3.77
449 459 1.513858 ACCACTGTCCACCTAACCAA 58.486 50.000 0.00 0.00 0.00 3.67
450 460 2.402182 TACCACTGTCCACCTAACCA 57.598 50.000 0.00 0.00 0.00 3.67
451 461 2.169978 GGATACCACTGTCCACCTAACC 59.830 54.545 0.00 0.00 34.57 2.85
452 462 3.538634 GGATACCACTGTCCACCTAAC 57.461 52.381 0.00 0.00 34.57 2.34
467 477 1.613061 CCTGGTGGGTTGGGGATAC 59.387 63.158 0.00 0.00 0.00 2.24
468 478 4.179896 CCTGGTGGGTTGGGGATA 57.820 61.111 0.00 0.00 0.00 2.59
483 493 2.618045 CGAGCACCAGGATTTAAACCCT 60.618 50.000 0.00 0.00 0.00 4.34
484 494 1.743394 CGAGCACCAGGATTTAAACCC 59.257 52.381 0.00 0.00 0.00 4.11
485 495 1.132453 GCGAGCACCAGGATTTAAACC 59.868 52.381 0.00 0.00 0.00 3.27
486 496 1.810151 TGCGAGCACCAGGATTTAAAC 59.190 47.619 0.00 0.00 0.00 2.01
487 497 2.192664 TGCGAGCACCAGGATTTAAA 57.807 45.000 0.00 0.00 0.00 1.52
488 498 2.418368 ATGCGAGCACCAGGATTTAA 57.582 45.000 0.00 0.00 0.00 1.52
489 499 2.418368 AATGCGAGCACCAGGATTTA 57.582 45.000 0.00 0.00 0.00 1.40
490 500 2.418368 TAATGCGAGCACCAGGATTT 57.582 45.000 0.00 0.00 31.11 2.17
491 501 2.645838 ATAATGCGAGCACCAGGATT 57.354 45.000 0.00 0.00 33.17 3.01
492 502 2.498167 GAATAATGCGAGCACCAGGAT 58.502 47.619 0.00 0.00 0.00 3.24
493 503 1.475034 GGAATAATGCGAGCACCAGGA 60.475 52.381 0.00 0.00 0.00 3.86
494 504 0.947244 GGAATAATGCGAGCACCAGG 59.053 55.000 0.00 0.00 0.00 4.45
495 505 1.600957 CAGGAATAATGCGAGCACCAG 59.399 52.381 0.00 0.00 0.00 4.00
496 506 1.667236 CAGGAATAATGCGAGCACCA 58.333 50.000 0.00 0.00 0.00 4.17
497 507 0.947244 CCAGGAATAATGCGAGCACC 59.053 55.000 0.00 0.00 0.00 5.01
498 508 1.953559 TCCAGGAATAATGCGAGCAC 58.046 50.000 0.00 0.00 0.00 4.40
499 509 2.936919 ATCCAGGAATAATGCGAGCA 57.063 45.000 0.00 0.00 0.00 4.26
500 510 5.886960 ATAAATCCAGGAATAATGCGAGC 57.113 39.130 0.00 0.00 0.00 5.03
501 511 7.874940 TGAAATAAATCCAGGAATAATGCGAG 58.125 34.615 0.00 0.00 0.00 5.03
502 512 7.815840 TGAAATAAATCCAGGAATAATGCGA 57.184 32.000 0.00 0.00 0.00 5.10
512 522 5.010012 CCGGAAATCCTGAAATAAATCCAGG 59.990 44.000 0.00 0.00 46.64 4.45
513 523 5.507985 GCCGGAAATCCTGAAATAAATCCAG 60.508 44.000 5.05 0.00 0.00 3.86
514 524 4.340950 GCCGGAAATCCTGAAATAAATCCA 59.659 41.667 5.05 0.00 0.00 3.41
515 525 4.556699 CGCCGGAAATCCTGAAATAAATCC 60.557 45.833 5.05 0.00 0.00 3.01
516 526 4.274950 TCGCCGGAAATCCTGAAATAAATC 59.725 41.667 5.05 0.00 0.00 2.17
517 527 4.204012 TCGCCGGAAATCCTGAAATAAAT 58.796 39.130 5.05 0.00 0.00 1.40
518 528 3.611970 TCGCCGGAAATCCTGAAATAAA 58.388 40.909 5.05 0.00 0.00 1.40
519 529 3.269538 TCGCCGGAAATCCTGAAATAA 57.730 42.857 5.05 0.00 0.00 1.40
520 530 2.992124 TCGCCGGAAATCCTGAAATA 57.008 45.000 5.05 0.00 0.00 1.40
521 531 1.949525 CATCGCCGGAAATCCTGAAAT 59.050 47.619 5.05 0.00 0.00 2.17
522 532 1.378531 CATCGCCGGAAATCCTGAAA 58.621 50.000 5.05 0.00 0.00 2.69
523 533 1.095228 GCATCGCCGGAAATCCTGAA 61.095 55.000 5.05 0.00 0.00 3.02
524 534 1.523711 GCATCGCCGGAAATCCTGA 60.524 57.895 5.05 0.00 0.00 3.86
525 535 2.885676 CGCATCGCCGGAAATCCTG 61.886 63.158 5.05 0.00 0.00 3.86
526 536 2.588877 CGCATCGCCGGAAATCCT 60.589 61.111 5.05 0.00 0.00 3.24
537 547 1.699656 CTCCCACTGAAAGCGCATCG 61.700 60.000 11.47 6.82 37.60 3.84
538 548 1.372087 CCTCCCACTGAAAGCGCATC 61.372 60.000 11.47 8.39 37.60 3.91
539 549 1.377725 CCTCCCACTGAAAGCGCAT 60.378 57.895 11.47 0.00 37.60 4.73
540 550 2.032528 CCTCCCACTGAAAGCGCA 59.967 61.111 11.47 0.00 37.60 6.09
541 551 0.889186 TTTCCTCCCACTGAAAGCGC 60.889 55.000 0.00 0.00 37.60 5.92
542 552 0.875059 GTTTCCTCCCACTGAAAGCG 59.125 55.000 0.00 0.00 37.60 4.68
543 553 0.875059 CGTTTCCTCCCACTGAAAGC 59.125 55.000 0.00 0.00 37.60 3.51
544 554 2.256117 ACGTTTCCTCCCACTGAAAG 57.744 50.000 0.00 0.00 42.29 2.62
545 555 2.567985 GAACGTTTCCTCCCACTGAAA 58.432 47.619 0.46 0.00 0.00 2.69
546 556 1.202722 GGAACGTTTCCTCCCACTGAA 60.203 52.381 0.46 0.00 46.57 3.02
547 557 0.395312 GGAACGTTTCCTCCCACTGA 59.605 55.000 0.46 0.00 46.57 3.41
548 558 2.928416 GGAACGTTTCCTCCCACTG 58.072 57.895 0.46 0.00 46.57 3.66
568 578 2.831366 TAGGCGCCTCGTCATCGAC 61.831 63.158 36.73 0.00 41.35 4.20
569 579 2.515290 TAGGCGCCTCGTCATCGA 60.515 61.111 36.73 10.36 44.12 3.59
570 580 2.353607 GTAGGCGCCTCGTCATCG 60.354 66.667 36.73 0.00 32.13 3.84
571 581 2.353607 CGTAGGCGCCTCGTCATC 60.354 66.667 36.73 15.88 32.13 2.92
572 582 3.900892 CCGTAGGCGCCTCGTCAT 61.901 66.667 36.73 11.27 46.14 3.06
584 594 8.231304 TCTTAAAATTTACGAAGTCACCGTAG 57.769 34.615 0.00 0.00 43.93 3.51
585 595 8.649841 CATCTTAAAATTTACGAAGTCACCGTA 58.350 33.333 0.00 0.00 43.93 4.02
586 596 7.385752 TCATCTTAAAATTTACGAAGTCACCGT 59.614 33.333 0.00 0.00 43.93 4.83
587 597 7.735500 TCATCTTAAAATTTACGAAGTCACCG 58.264 34.615 0.00 0.00 43.93 4.94
593 603 9.318041 CGGCATATCATCTTAAAATTTACGAAG 57.682 33.333 0.00 0.00 0.00 3.79
594 604 8.286800 CCGGCATATCATCTTAAAATTTACGAA 58.713 33.333 0.00 0.00 0.00 3.85
595 605 7.572353 GCCGGCATATCATCTTAAAATTTACGA 60.572 37.037 24.80 0.00 0.00 3.43
596 606 6.523201 GCCGGCATATCATCTTAAAATTTACG 59.477 38.462 24.80 0.00 0.00 3.18
597 607 7.593825 AGCCGGCATATCATCTTAAAATTTAC 58.406 34.615 31.54 0.00 0.00 2.01
598 608 7.446931 TGAGCCGGCATATCATCTTAAAATTTA 59.553 33.333 31.54 0.00 0.00 1.40
599 609 6.265196 TGAGCCGGCATATCATCTTAAAATTT 59.735 34.615 31.54 0.00 0.00 1.82
600 610 5.769662 TGAGCCGGCATATCATCTTAAAATT 59.230 36.000 31.54 0.00 0.00 1.82
601 611 5.316167 TGAGCCGGCATATCATCTTAAAAT 58.684 37.500 31.54 0.06 0.00 1.82
602 612 4.713553 TGAGCCGGCATATCATCTTAAAA 58.286 39.130 31.54 0.00 0.00 1.52
603 613 4.202357 ACTGAGCCGGCATATCATCTTAAA 60.202 41.667 31.54 0.00 0.00 1.52
604 614 3.324846 ACTGAGCCGGCATATCATCTTAA 59.675 43.478 31.54 0.00 0.00 1.85
605 615 2.899900 ACTGAGCCGGCATATCATCTTA 59.100 45.455 31.54 0.00 0.00 2.10
606 616 1.696336 ACTGAGCCGGCATATCATCTT 59.304 47.619 31.54 3.33 0.00 2.40
607 617 1.274728 GACTGAGCCGGCATATCATCT 59.725 52.381 31.54 11.40 0.00 2.90
608 618 1.274728 AGACTGAGCCGGCATATCATC 59.725 52.381 31.54 19.98 0.00 2.92
609 619 1.274728 GAGACTGAGCCGGCATATCAT 59.725 52.381 31.54 13.17 0.00 2.45
610 620 0.676184 GAGACTGAGCCGGCATATCA 59.324 55.000 31.54 22.44 0.00 2.15
611 621 0.965439 AGAGACTGAGCCGGCATATC 59.035 55.000 31.54 18.63 0.00 1.63
612 622 0.965439 GAGAGACTGAGCCGGCATAT 59.035 55.000 31.54 8.11 0.00 1.78
613 623 1.448119 CGAGAGACTGAGCCGGCATA 61.448 60.000 31.54 16.21 0.00 3.14
614 624 2.780094 CGAGAGACTGAGCCGGCAT 61.780 63.158 31.54 14.28 0.00 4.40
615 625 3.443925 CGAGAGACTGAGCCGGCA 61.444 66.667 31.54 7.98 0.00 5.69
616 626 2.701780 TTCGAGAGACTGAGCCGGC 61.702 63.158 21.89 21.89 41.84 6.13
617 627 1.137825 GTTCGAGAGACTGAGCCGG 59.862 63.158 0.00 0.00 41.84 6.13
618 628 1.226156 CGTTCGAGAGACTGAGCCG 60.226 63.158 0.00 0.00 41.84 5.52
619 629 0.455295 CACGTTCGAGAGACTGAGCC 60.455 60.000 0.00 0.00 41.84 4.70
620 630 1.068287 GCACGTTCGAGAGACTGAGC 61.068 60.000 0.00 0.00 41.84 4.26
621 631 0.519519 AGCACGTTCGAGAGACTGAG 59.480 55.000 0.00 0.00 41.84 3.35
622 632 0.517755 GAGCACGTTCGAGAGACTGA 59.482 55.000 0.00 0.00 41.84 3.41
623 633 0.238553 TGAGCACGTTCGAGAGACTG 59.761 55.000 0.00 0.00 41.84 3.51
624 634 1.169577 ATGAGCACGTTCGAGAGACT 58.830 50.000 0.00 0.00 41.84 3.24
625 635 2.539953 CCTATGAGCACGTTCGAGAGAC 60.540 54.545 0.00 0.00 41.84 3.36
626 636 1.671328 CCTATGAGCACGTTCGAGAGA 59.329 52.381 0.00 0.00 39.20 3.10
627 637 1.268794 CCCTATGAGCACGTTCGAGAG 60.269 57.143 0.00 0.00 0.00 3.20
628 638 0.738975 CCCTATGAGCACGTTCGAGA 59.261 55.000 0.00 0.00 0.00 4.04
629 639 0.249073 CCCCTATGAGCACGTTCGAG 60.249 60.000 0.00 0.00 0.00 4.04
630 640 0.968901 ACCCCTATGAGCACGTTCGA 60.969 55.000 0.00 0.00 0.00 3.71
631 641 0.742505 TACCCCTATGAGCACGTTCG 59.257 55.000 0.00 0.00 0.00 3.95
632 642 1.068741 CCTACCCCTATGAGCACGTTC 59.931 57.143 0.00 0.00 0.00 3.95
633 643 1.120530 CCTACCCCTATGAGCACGTT 58.879 55.000 0.00 0.00 0.00 3.99
634 644 0.759436 CCCTACCCCTATGAGCACGT 60.759 60.000 0.00 0.00 0.00 4.49
635 645 0.759436 ACCCTACCCCTATGAGCACG 60.759 60.000 0.00 0.00 0.00 5.34
636 646 0.759346 CACCCTACCCCTATGAGCAC 59.241 60.000 0.00 0.00 0.00 4.40
637 647 0.341961 ACACCCTACCCCTATGAGCA 59.658 55.000 0.00 0.00 0.00 4.26
638 648 0.759346 CACACCCTACCCCTATGAGC 59.241 60.000 0.00 0.00 0.00 4.26
639 649 0.759346 GCACACCCTACCCCTATGAG 59.241 60.000 0.00 0.00 0.00 2.90
640 650 1.046472 CGCACACCCTACCCCTATGA 61.046 60.000 0.00 0.00 0.00 2.15
641 651 1.335132 ACGCACACCCTACCCCTATG 61.335 60.000 0.00 0.00 0.00 2.23
642 652 1.002533 ACGCACACCCTACCCCTAT 59.997 57.895 0.00 0.00 0.00 2.57
643 653 1.985662 CACGCACACCCTACCCCTA 60.986 63.158 0.00 0.00 0.00 3.53
644 654 3.319198 CACGCACACCCTACCCCT 61.319 66.667 0.00 0.00 0.00 4.79
647 657 4.675029 ACGCACGCACACCCTACC 62.675 66.667 0.00 0.00 0.00 3.18
648 658 3.411351 CACGCACGCACACCCTAC 61.411 66.667 0.00 0.00 0.00 3.18
649 659 3.918977 ACACGCACGCACACCCTA 61.919 61.111 0.00 0.00 0.00 3.53
652 662 2.037913 TAAACACACGCACGCACACC 62.038 55.000 0.00 0.00 0.00 4.16
653 663 0.041663 ATAAACACACGCACGCACAC 60.042 50.000 0.00 0.00 0.00 3.82
654 664 1.457683 CTATAAACACACGCACGCACA 59.542 47.619 0.00 0.00 0.00 4.57
655 665 1.201877 CCTATAAACACACGCACGCAC 60.202 52.381 0.00 0.00 0.00 5.34
656 666 1.072391 CCTATAAACACACGCACGCA 58.928 50.000 0.00 0.00 0.00 5.24
657 667 0.372334 CCCTATAAACACACGCACGC 59.628 55.000 0.00 0.00 0.00 5.34
658 668 1.003851 CCCCTATAAACACACGCACG 58.996 55.000 0.00 0.00 0.00 5.34
659 669 1.735571 CACCCCTATAAACACACGCAC 59.264 52.381 0.00 0.00 0.00 5.34
660 670 1.624312 TCACCCCTATAAACACACGCA 59.376 47.619 0.00 0.00 0.00 5.24
661 671 2.277084 CTCACCCCTATAAACACACGC 58.723 52.381 0.00 0.00 0.00 5.34
662 672 3.259064 CACTCACCCCTATAAACACACG 58.741 50.000 0.00 0.00 0.00 4.49
663 673 4.281898 ACACTCACCCCTATAAACACAC 57.718 45.455 0.00 0.00 0.00 3.82
664 674 5.628200 GCATACACTCACCCCTATAAACACA 60.628 44.000 0.00 0.00 0.00 3.72
665 675 4.814771 GCATACACTCACCCCTATAAACAC 59.185 45.833 0.00 0.00 0.00 3.32
666 676 4.442332 CGCATACACTCACCCCTATAAACA 60.442 45.833 0.00 0.00 0.00 2.83
667 677 4.056050 CGCATACACTCACCCCTATAAAC 58.944 47.826 0.00 0.00 0.00 2.01
668 678 3.493699 GCGCATACACTCACCCCTATAAA 60.494 47.826 0.30 0.00 0.00 1.40
669 679 2.036733 GCGCATACACTCACCCCTATAA 59.963 50.000 0.30 0.00 0.00 0.98
670 680 1.616865 GCGCATACACTCACCCCTATA 59.383 52.381 0.30 0.00 0.00 1.31
671 681 0.393077 GCGCATACACTCACCCCTAT 59.607 55.000 0.30 0.00 0.00 2.57
672 682 1.820581 GCGCATACACTCACCCCTA 59.179 57.895 0.30 0.00 0.00 3.53
673 683 2.584608 GCGCATACACTCACCCCT 59.415 61.111 0.30 0.00 0.00 4.79
674 684 2.890474 CGCGCATACACTCACCCC 60.890 66.667 8.75 0.00 0.00 4.95
675 685 2.125673 ACGCGCATACACTCACCC 60.126 61.111 5.73 0.00 0.00 4.61
676 686 0.457166 TACACGCGCATACACTCACC 60.457 55.000 5.73 0.00 0.00 4.02
677 687 1.556564 ATACACGCGCATACACTCAC 58.443 50.000 5.73 0.00 0.00 3.51
678 688 3.003897 TCATATACACGCGCATACACTCA 59.996 43.478 5.73 0.00 0.00 3.41
679 689 3.561503 TCATATACACGCGCATACACTC 58.438 45.455 5.73 0.00 0.00 3.51
680 690 3.004419 ACTCATATACACGCGCATACACT 59.996 43.478 5.73 0.00 0.00 3.55
681 691 3.119628 CACTCATATACACGCGCATACAC 59.880 47.826 5.73 0.00 0.00 2.90
682 692 3.305110 CACTCATATACACGCGCATACA 58.695 45.455 5.73 0.00 0.00 2.29
683 693 2.090658 GCACTCATATACACGCGCATAC 59.909 50.000 5.73 0.00 0.00 2.39
684 694 2.030274 AGCACTCATATACACGCGCATA 60.030 45.455 5.73 1.53 0.00 3.14
685 695 1.139989 GCACTCATATACACGCGCAT 58.860 50.000 5.73 0.00 0.00 4.73
686 696 0.102300 AGCACTCATATACACGCGCA 59.898 50.000 5.73 0.00 0.00 6.09
687 697 1.071239 CAAGCACTCATATACACGCGC 60.071 52.381 5.73 0.00 0.00 6.86
688 698 2.034591 CACAAGCACTCATATACACGCG 60.035 50.000 3.53 3.53 0.00 6.01
689 699 2.930040 ACACAAGCACTCATATACACGC 59.070 45.455 0.00 0.00 0.00 5.34
690 700 4.266265 CAGACACAAGCACTCATATACACG 59.734 45.833 0.00 0.00 0.00 4.49
691 701 5.171476 ACAGACACAAGCACTCATATACAC 58.829 41.667 0.00 0.00 0.00 2.90
692 702 5.405935 ACAGACACAAGCACTCATATACA 57.594 39.130 0.00 0.00 0.00 2.29
693 703 6.473778 CAGTACAGACACAAGCACTCATATAC 59.526 42.308 0.00 0.00 0.00 1.47
694 704 6.377146 TCAGTACAGACACAAGCACTCATATA 59.623 38.462 0.00 0.00 0.00 0.86
695 705 5.185828 TCAGTACAGACACAAGCACTCATAT 59.814 40.000 0.00 0.00 0.00 1.78
696 706 4.522789 TCAGTACAGACACAAGCACTCATA 59.477 41.667 0.00 0.00 0.00 2.15
697 707 3.321968 TCAGTACAGACACAAGCACTCAT 59.678 43.478 0.00 0.00 0.00 2.90
698 708 2.693074 TCAGTACAGACACAAGCACTCA 59.307 45.455 0.00 0.00 0.00 3.41
699 709 3.371102 TCAGTACAGACACAAGCACTC 57.629 47.619 0.00 0.00 0.00 3.51
700 710 3.657634 CATCAGTACAGACACAAGCACT 58.342 45.455 0.00 0.00 0.00 4.40
701 711 2.158449 GCATCAGTACAGACACAAGCAC 59.842 50.000 0.00 0.00 0.00 4.40
702 712 2.037641 AGCATCAGTACAGACACAAGCA 59.962 45.455 0.00 0.00 0.00 3.91
703 713 2.693069 AGCATCAGTACAGACACAAGC 58.307 47.619 0.00 0.00 0.00 4.01
704 714 6.785488 TTTTAGCATCAGTACAGACACAAG 57.215 37.500 0.00 0.00 0.00 3.16
797 813 4.453892 GCTTGGGCTGGGCAGGAT 62.454 66.667 0.00 0.00 35.22 3.24
969 1853 0.034896 AGGTGTTCGAGGAAATGCGT 59.965 50.000 0.00 0.00 0.00 5.24
1236 2135 2.493501 GGGGCGTCGAAGTAGGAC 59.506 66.667 0.00 0.00 0.00 3.85
1803 2707 5.539582 TGCCGCACCGATTATTATTATTC 57.460 39.130 0.00 0.00 0.00 1.75
1837 2741 1.727511 GGTGACAGCAGCAGCAAACA 61.728 55.000 3.17 0.00 45.49 2.83
1838 2742 1.008079 GGTGACAGCAGCAGCAAAC 60.008 57.895 3.17 0.00 45.49 2.93
1839 2743 0.752743 AAGGTGACAGCAGCAGCAAA 60.753 50.000 7.50 0.00 44.77 3.68
1874 2788 1.586564 CTACGCTGCACTACTCGGC 60.587 63.158 0.00 0.00 0.00 5.54
1876 2790 0.179161 AAGCTACGCTGCACTACTCG 60.179 55.000 0.00 0.00 39.62 4.18
1905 2819 6.598457 CCAGAAACTTCACATCTCATCAAGAT 59.402 38.462 0.00 0.00 46.04 2.40
1906 2820 5.936372 CCAGAAACTTCACATCTCATCAAGA 59.064 40.000 0.00 0.00 38.72 3.02
1907 2821 5.936372 TCCAGAAACTTCACATCTCATCAAG 59.064 40.000 0.00 0.00 0.00 3.02
1908 2822 5.868454 TCCAGAAACTTCACATCTCATCAA 58.132 37.500 0.00 0.00 0.00 2.57
1909 2823 5.246883 TCTCCAGAAACTTCACATCTCATCA 59.753 40.000 0.00 0.00 0.00 3.07
1910 2824 5.728471 TCTCCAGAAACTTCACATCTCATC 58.272 41.667 0.00 0.00 0.00 2.92
1911 2825 5.752036 TCTCCAGAAACTTCACATCTCAT 57.248 39.130 0.00 0.00 0.00 2.90
1912 2826 5.070981 AGTTCTCCAGAAACTTCACATCTCA 59.929 40.000 0.00 0.00 35.58 3.27
1913 2827 5.546526 AGTTCTCCAGAAACTTCACATCTC 58.453 41.667 0.00 0.00 35.58 2.75
1914 2828 5.559148 AGTTCTCCAGAAACTTCACATCT 57.441 39.130 0.00 0.00 35.58 2.90
1915 2829 7.099764 TCATAGTTCTCCAGAAACTTCACATC 58.900 38.462 0.00 0.00 35.58 3.06
1916 2830 7.009179 TCATAGTTCTCCAGAAACTTCACAT 57.991 36.000 0.00 0.00 35.58 3.21
2067 2990 1.565759 TCCTGCATAAATGGAGCCACT 59.434 47.619 5.99 0.00 43.84 4.00
2076 2999 5.128663 ACCGCCTTAATTTTCCTGCATAAAT 59.871 36.000 0.00 0.00 0.00 1.40
2129 3052 2.115052 TCCACTGGCCGTGCAAAT 59.885 55.556 18.57 0.00 42.42 2.32
2130 3053 2.904866 GTCCACTGGCCGTGCAAA 60.905 61.111 18.57 6.82 42.42 3.68
2131 3054 4.182433 TGTCCACTGGCCGTGCAA 62.182 61.111 18.57 8.81 42.42 4.08
2132 3055 4.927782 GTGTCCACTGGCCGTGCA 62.928 66.667 18.57 11.35 42.42 4.57
2133 3056 4.927782 TGTGTCCACTGGCCGTGC 62.928 66.667 18.57 9.34 42.42 5.34
2135 3058 3.460672 CTGTGTGTCCACTGGCCGT 62.461 63.158 0.00 0.00 42.34 5.68
2136 3059 2.666190 CTGTGTGTCCACTGGCCG 60.666 66.667 0.00 0.00 42.34 6.13
2137 3060 1.893808 CACTGTGTGTCCACTGGCC 60.894 63.158 0.00 0.00 42.85 5.36
2140 3063 5.947228 ATTAATTCACTGTGTGTCCACTG 57.053 39.130 7.79 0.00 43.81 3.66
2141 3064 8.514594 CATTAATTAATTCACTGTGTGTCCACT 58.485 33.333 8.01 0.00 42.34 4.00
2142 3065 8.511321 TCATTAATTAATTCACTGTGTGTCCAC 58.489 33.333 8.01 0.00 42.19 4.02
2182 3105 8.481314 TGCTGACAATTCAAGAGATACTCTATT 58.519 33.333 1.64 0.00 40.28 1.73
2185 3108 6.291648 TGCTGACAATTCAAGAGATACTCT 57.708 37.500 0.00 0.00 43.37 3.24
2186 3109 6.815641 TCTTGCTGACAATTCAAGAGATACTC 59.184 38.462 9.22 0.00 40.63 2.59
2188 3111 6.770076 GTCTTGCTGACAATTCAAGAGATAC 58.230 40.000 12.16 2.28 44.50 2.24
2211 3134 3.864243 TGGTCTGTGTTTTGACGTTAGT 58.136 40.909 0.00 0.00 34.31 2.24
2212 3135 4.331717 AGTTGGTCTGTGTTTTGACGTTAG 59.668 41.667 0.00 0.00 34.31 2.34
2214 3137 3.078837 AGTTGGTCTGTGTTTTGACGTT 58.921 40.909 0.00 0.00 34.31 3.99
2216 3139 3.757745 AAGTTGGTCTGTGTTTTGACG 57.242 42.857 0.00 0.00 34.31 4.35
2218 3141 5.975693 AGAAAAGTTGGTCTGTGTTTTGA 57.024 34.783 0.00 0.00 0.00 2.69
2219 3142 7.384932 AGAAAAGAAAAGTTGGTCTGTGTTTTG 59.615 33.333 0.00 0.00 0.00 2.44
2221 3144 6.993079 AGAAAAGAAAAGTTGGTCTGTGTTT 58.007 32.000 0.00 0.00 0.00 2.83
2223 3146 5.710099 TGAGAAAAGAAAAGTTGGTCTGTGT 59.290 36.000 0.00 0.00 0.00 3.72
2225 3148 6.830838 AGATGAGAAAAGAAAAGTTGGTCTGT 59.169 34.615 0.00 0.00 0.00 3.41
2226 3149 7.269477 AGATGAGAAAAGAAAAGTTGGTCTG 57.731 36.000 0.00 0.00 0.00 3.51
2227 3150 6.488344 GGAGATGAGAAAAGAAAAGTTGGTCT 59.512 38.462 0.00 0.00 0.00 3.85
2228 3151 6.488344 AGGAGATGAGAAAAGAAAAGTTGGTC 59.512 38.462 0.00 0.00 0.00 4.02
2229 3152 6.368805 AGGAGATGAGAAAAGAAAAGTTGGT 58.631 36.000 0.00 0.00 0.00 3.67
2243 3543 8.609617 TTTCTCTGGTTATAAAGGAGATGAGA 57.390 34.615 11.51 0.00 33.82 3.27
2244 3544 9.323985 CTTTTCTCTGGTTATAAAGGAGATGAG 57.676 37.037 11.51 9.54 33.82 2.90
2245 3545 7.770897 GCTTTTCTCTGGTTATAAAGGAGATGA 59.229 37.037 11.51 4.76 33.82 2.92
2246 3546 7.554118 TGCTTTTCTCTGGTTATAAAGGAGATG 59.446 37.037 11.51 8.12 33.82 2.90
2248 3548 7.016153 TGCTTTTCTCTGGTTATAAAGGAGA 57.984 36.000 8.36 8.36 0.00 3.71
2249 3549 7.106239 TCTGCTTTTCTCTGGTTATAAAGGAG 58.894 38.462 0.00 0.00 42.21 3.69
2251 3551 7.872113 ATCTGCTTTTCTCTGGTTATAAAGG 57.128 36.000 0.00 0.00 0.00 3.11
2255 3555 8.046708 TGCTTTATCTGCTTTTCTCTGGTTATA 58.953 33.333 0.00 0.00 0.00 0.98
2256 3556 6.886459 TGCTTTATCTGCTTTTCTCTGGTTAT 59.114 34.615 0.00 0.00 0.00 1.89
2259 3559 4.655963 TGCTTTATCTGCTTTTCTCTGGT 58.344 39.130 0.00 0.00 0.00 4.00
2320 4381 7.560368 TGGATCTCCAAGTTATCTCTTCTTTC 58.440 38.462 0.00 0.00 44.35 2.62
2324 4385 6.097554 TCACTGGATCTCCAAGTTATCTCTTC 59.902 42.308 0.00 0.00 46.97 2.87
2326 4387 5.523588 TCACTGGATCTCCAAGTTATCTCT 58.476 41.667 0.00 0.00 46.97 3.10
2327 4388 5.860941 TCACTGGATCTCCAAGTTATCTC 57.139 43.478 0.00 0.00 46.97 2.75
2328 4389 5.723887 ACTTCACTGGATCTCCAAGTTATCT 59.276 40.000 0.00 0.00 46.97 1.98
2329 4390 5.983540 ACTTCACTGGATCTCCAAGTTATC 58.016 41.667 0.00 0.00 46.97 1.75
2330 4391 6.380079 AACTTCACTGGATCTCCAAGTTAT 57.620 37.500 10.80 0.00 46.97 1.89
2332 4393 4.713792 AACTTCACTGGATCTCCAAGTT 57.286 40.909 7.80 7.80 46.97 2.66
2333 4394 5.544176 TCTTAACTTCACTGGATCTCCAAGT 59.456 40.000 0.00 0.00 46.97 3.16
2335 4396 5.569630 GCTCTTAACTTCACTGGATCTCCAA 60.570 44.000 0.00 0.00 46.97 3.53
2336 4397 4.081420 GCTCTTAACTTCACTGGATCTCCA 60.081 45.833 0.00 0.00 45.30 3.86
2337 4398 4.081420 TGCTCTTAACTTCACTGGATCTCC 60.081 45.833 0.00 0.00 0.00 3.71
2340 4401 7.849804 TTATTGCTCTTAACTTCACTGGATC 57.150 36.000 0.00 0.00 0.00 3.36
2341 4402 7.121315 GGTTTATTGCTCTTAACTTCACTGGAT 59.879 37.037 0.00 0.00 0.00 3.41
2342 4403 6.430000 GGTTTATTGCTCTTAACTTCACTGGA 59.570 38.462 0.00 0.00 0.00 3.86
2343 4404 6.206634 TGGTTTATTGCTCTTAACTTCACTGG 59.793 38.462 0.00 0.00 0.00 4.00
2344 4405 7.202016 TGGTTTATTGCTCTTAACTTCACTG 57.798 36.000 0.00 0.00 0.00 3.66
2346 4407 8.045176 AGATGGTTTATTGCTCTTAACTTCAC 57.955 34.615 0.00 0.00 0.00 3.18
2349 4410 9.905713 TGATAGATGGTTTATTGCTCTTAACTT 57.094 29.630 0.00 0.00 0.00 2.66
2350 4411 9.553064 CTGATAGATGGTTTATTGCTCTTAACT 57.447 33.333 0.00 0.00 0.00 2.24
2351 4412 9.547753 TCTGATAGATGGTTTATTGCTCTTAAC 57.452 33.333 0.00 0.00 0.00 2.01
2354 4415 9.064706 CATTCTGATAGATGGTTTATTGCTCTT 57.935 33.333 0.00 0.00 0.00 2.85
2355 4416 7.174599 GCATTCTGATAGATGGTTTATTGCTCT 59.825 37.037 0.00 0.00 0.00 4.09
2356 4417 7.303998 GCATTCTGATAGATGGTTTATTGCTC 58.696 38.462 0.00 0.00 0.00 4.26
2357 4418 6.072838 CGCATTCTGATAGATGGTTTATTGCT 60.073 38.462 0.00 0.00 0.00 3.91
2358 4419 6.073058 TCGCATTCTGATAGATGGTTTATTGC 60.073 38.462 0.00 0.00 0.00 3.56
2359 4420 7.425577 TCGCATTCTGATAGATGGTTTATTG 57.574 36.000 0.00 0.00 0.00 1.90
2363 4424 5.431765 ACTTCGCATTCTGATAGATGGTTT 58.568 37.500 0.00 0.00 0.00 3.27
2367 4428 4.294232 ACGACTTCGCATTCTGATAGATG 58.706 43.478 0.00 0.00 44.43 2.90
2372 4433 3.845178 TGTAACGACTTCGCATTCTGAT 58.155 40.909 0.00 0.00 44.43 2.90
2375 4436 3.570926 TCTGTAACGACTTCGCATTCT 57.429 42.857 0.00 0.00 44.43 2.40
2378 4439 4.565564 GGTTAATCTGTAACGACTTCGCAT 59.434 41.667 0.00 0.00 44.43 4.73
2379 4440 3.922240 GGTTAATCTGTAACGACTTCGCA 59.078 43.478 0.00 0.00 44.43 5.10
2401 4462 1.634702 GCTTCTCTACAACCTCGCTG 58.365 55.000 0.00 0.00 0.00 5.18
2402 4463 0.533032 GGCTTCTCTACAACCTCGCT 59.467 55.000 0.00 0.00 0.00 4.93
2403 4464 0.460459 GGGCTTCTCTACAACCTCGC 60.460 60.000 0.00 0.00 0.00 5.03
2405 4466 2.180276 TCAGGGCTTCTCTACAACCTC 58.820 52.381 0.00 0.00 0.00 3.85
2411 4472 2.368221 AGCATGATCAGGGCTTCTCTAC 59.632 50.000 16.57 0.00 33.21 2.59
2416 4477 3.696051 TGTAAAAGCATGATCAGGGCTTC 59.304 43.478 27.70 19.39 46.39 3.86
2421 4482 4.380867 GGTTGGTGTAAAAGCATGATCAGG 60.381 45.833 2.22 2.22 35.85 3.86
2425 4486 4.399303 GCTAGGTTGGTGTAAAAGCATGAT 59.601 41.667 0.00 0.00 35.85 2.45
2436 4497 2.453521 TCGTCTATGCTAGGTTGGTGT 58.546 47.619 0.00 0.00 0.00 4.16
2445 4506 4.181578 GTTTTCTGGCTTCGTCTATGCTA 58.818 43.478 0.00 0.00 0.00 3.49
2454 4515 2.760374 ACTCTCTGTTTTCTGGCTTCG 58.240 47.619 0.00 0.00 0.00 3.79
2456 4517 3.071602 TGCTACTCTCTGTTTTCTGGCTT 59.928 43.478 0.00 0.00 0.00 4.35
2460 4521 6.203530 TCAACAATGCTACTCTCTGTTTTCTG 59.796 38.462 0.00 0.00 0.00 3.02
2466 4529 3.579709 CGTCAACAATGCTACTCTCTGT 58.420 45.455 0.00 0.00 0.00 3.41
2489 4552 2.698855 ATTAATGCTCACTGCTCGGT 57.301 45.000 0.00 0.00 43.37 4.69
2490 4553 4.083643 CCATAATTAATGCTCACTGCTCGG 60.084 45.833 0.00 0.00 43.37 4.63
2491 4554 4.512944 ACCATAATTAATGCTCACTGCTCG 59.487 41.667 0.00 0.00 43.37 5.03
2539 4602 3.722728 CAAATTTGCTAGGGCCATCTC 57.277 47.619 6.18 0.00 37.74 2.75
2563 4626 2.552031 GAGGTTGAATCTCCGGTTAGC 58.448 52.381 0.00 0.00 0.00 3.09
2565 4628 2.165030 GACGAGGTTGAATCTCCGGTTA 59.835 50.000 0.00 0.00 0.00 2.85
2578 4641 7.554959 AAGATGTATATTATGGGACGAGGTT 57.445 36.000 0.00 0.00 0.00 3.50
2582 4645 8.536175 TGCAATAAGATGTATATTATGGGACGA 58.464 33.333 0.00 0.00 0.00 4.20
2583 4646 8.716646 TGCAATAAGATGTATATTATGGGACG 57.283 34.615 0.00 0.00 0.00 4.79
2585 4648 9.851686 GGATGCAATAAGATGTATATTATGGGA 57.148 33.333 0.00 0.00 0.00 4.37
2586 4649 9.631257 TGGATGCAATAAGATGTATATTATGGG 57.369 33.333 0.00 0.00 0.00 4.00
2593 4656 8.306038 GCCAAATTGGATGCAATAAGATGTATA 58.694 33.333 17.47 0.00 40.96 1.47
2594 4657 7.015877 AGCCAAATTGGATGCAATAAGATGTAT 59.984 33.333 17.47 0.00 40.96 2.29
2595 4658 6.324512 AGCCAAATTGGATGCAATAAGATGTA 59.675 34.615 17.47 0.00 40.96 2.29
2596 4659 5.129815 AGCCAAATTGGATGCAATAAGATGT 59.870 36.000 17.47 0.00 40.96 3.06
2597 4660 5.607477 AGCCAAATTGGATGCAATAAGATG 58.393 37.500 17.47 9.72 40.96 2.90
2598 4661 5.508489 CGAGCCAAATTGGATGCAATAAGAT 60.508 40.000 17.47 3.71 35.51 2.40
2599 4662 4.202040 CGAGCCAAATTGGATGCAATAAGA 60.202 41.667 17.47 0.00 35.51 2.10
2600 4663 4.046462 CGAGCCAAATTGGATGCAATAAG 58.954 43.478 17.47 8.49 35.51 1.73
2601 4664 3.181477 CCGAGCCAAATTGGATGCAATAA 60.181 43.478 17.47 0.00 35.51 1.40
2602 4665 2.361757 CCGAGCCAAATTGGATGCAATA 59.638 45.455 17.47 0.00 35.51 1.90
2603 4666 1.137479 CCGAGCCAAATTGGATGCAAT 59.863 47.619 17.47 6.63 35.51 3.56
2604 4667 0.531657 CCGAGCCAAATTGGATGCAA 59.468 50.000 17.47 0.79 35.51 4.08
2605 4668 0.323269 TCCGAGCCAAATTGGATGCA 60.323 50.000 17.47 0.00 35.51 3.96
2606 4669 0.383231 CTCCGAGCCAAATTGGATGC 59.617 55.000 17.47 0.00 35.51 3.91
2607 4670 1.027357 CCTCCGAGCCAAATTGGATG 58.973 55.000 17.47 4.53 35.51 3.51
2608 4671 0.106519 CCCTCCGAGCCAAATTGGAT 60.107 55.000 17.47 10.02 39.95 3.41
2609 4672 1.204786 TCCCTCCGAGCCAAATTGGA 61.205 55.000 17.47 0.00 40.96 3.53
2610 4673 0.749454 CTCCCTCCGAGCCAAATTGG 60.749 60.000 7.84 7.84 41.55 3.16
2611 4674 0.035056 ACTCCCTCCGAGCCAAATTG 60.035 55.000 0.00 0.00 43.01 2.32
2612 4675 0.035056 CACTCCCTCCGAGCCAAATT 60.035 55.000 0.00 0.00 43.01 1.82
2613 4676 1.201429 ACACTCCCTCCGAGCCAAAT 61.201 55.000 0.00 0.00 43.01 2.32
2614 4677 1.827399 GACACTCCCTCCGAGCCAAA 61.827 60.000 0.00 0.00 43.01 3.28
2615 4678 2.203788 ACACTCCCTCCGAGCCAA 60.204 61.111 0.00 0.00 43.01 4.52
2616 4679 1.859841 TAGACACTCCCTCCGAGCCA 61.860 60.000 0.00 0.00 43.01 4.75
2617 4680 0.683504 TTAGACACTCCCTCCGAGCC 60.684 60.000 0.00 0.00 43.01 4.70
2618 4681 0.741915 CTTAGACACTCCCTCCGAGC 59.258 60.000 0.00 0.00 43.01 5.03
2619 4682 2.131776 ACTTAGACACTCCCTCCGAG 57.868 55.000 0.00 0.00 44.95 4.63
2620 4683 2.575279 ACTACTTAGACACTCCCTCCGA 59.425 50.000 0.00 0.00 0.00 4.55
2621 4684 3.002038 ACTACTTAGACACTCCCTCCG 57.998 52.381 0.00 0.00 0.00 4.63
2622 4685 4.206375 GGTACTACTTAGACACTCCCTCC 58.794 52.174 0.00 0.00 0.00 4.30
2623 4686 4.206375 GGGTACTACTTAGACACTCCCTC 58.794 52.174 0.00 0.00 0.00 4.30
2624 4687 3.053019 GGGGTACTACTTAGACACTCCCT 60.053 52.174 0.00 0.00 30.98 4.20
2625 4688 3.295093 GGGGTACTACTTAGACACTCCC 58.705 54.545 0.00 0.00 30.98 4.30
2626 4689 2.948315 CGGGGTACTACTTAGACACTCC 59.052 54.545 0.00 0.00 32.64 3.85
2627 4690 3.615155 ACGGGGTACTACTTAGACACTC 58.385 50.000 0.00 0.00 0.00 3.51
2628 4691 3.615155 GACGGGGTACTACTTAGACACT 58.385 50.000 0.00 0.00 0.00 3.55
2629 4692 2.685388 GGACGGGGTACTACTTAGACAC 59.315 54.545 0.00 0.00 0.00 3.67
2630 4693 2.357154 GGGACGGGGTACTACTTAGACA 60.357 54.545 0.00 0.00 0.00 3.41
2631 4694 2.302260 GGGACGGGGTACTACTTAGAC 58.698 57.143 0.00 0.00 0.00 2.59
2632 4695 1.922447 TGGGACGGGGTACTACTTAGA 59.078 52.381 0.00 0.00 0.00 2.10
2633 4696 2.442236 TGGGACGGGGTACTACTTAG 57.558 55.000 0.00 0.00 0.00 2.18
2634 4697 4.534647 TTATGGGACGGGGTACTACTTA 57.465 45.455 0.00 0.00 0.00 2.24
2635 4698 3.403228 TTATGGGACGGGGTACTACTT 57.597 47.619 0.00 0.00 0.00 2.24
2636 4699 3.625252 ATTATGGGACGGGGTACTACT 57.375 47.619 0.00 0.00 0.00 2.57
2637 4700 6.891908 TCTTATATTATGGGACGGGGTACTAC 59.108 42.308 0.00 0.00 0.00 2.73
2638 4701 7.043300 TCTTATATTATGGGACGGGGTACTA 57.957 40.000 0.00 0.00 0.00 1.82
2639 4702 5.907421 TCTTATATTATGGGACGGGGTACT 58.093 41.667 0.00 0.00 0.00 2.73
2640 4703 5.394993 GCTCTTATATTATGGGACGGGGTAC 60.395 48.000 0.00 0.00 0.00 3.34
2641 4704 4.713321 GCTCTTATATTATGGGACGGGGTA 59.287 45.833 0.00 0.00 0.00 3.69
2642 4705 3.518303 GCTCTTATATTATGGGACGGGGT 59.482 47.826 0.00 0.00 0.00 4.95
2643 4706 3.430374 CGCTCTTATATTATGGGACGGGG 60.430 52.174 0.00 0.00 0.00 5.73
2644 4707 3.782046 CGCTCTTATATTATGGGACGGG 58.218 50.000 0.00 0.00 0.00 5.28
2645 4708 3.119101 AGCGCTCTTATATTATGGGACGG 60.119 47.826 2.64 0.00 0.00 4.79
2646 4709 4.111375 AGCGCTCTTATATTATGGGACG 57.889 45.455 2.64 0.00 0.00 4.79
2647 4710 5.932303 TCAAAGCGCTCTTATATTATGGGAC 59.068 40.000 12.06 0.00 31.02 4.46
2648 4711 5.932303 GTCAAAGCGCTCTTATATTATGGGA 59.068 40.000 12.06 0.00 31.02 4.37
2649 4712 5.700832 TGTCAAAGCGCTCTTATATTATGGG 59.299 40.000 12.06 0.00 31.02 4.00
2650 4713 6.425114 AGTGTCAAAGCGCTCTTATATTATGG 59.575 38.462 12.06 0.00 31.02 2.74
2651 4714 7.413475 AGTGTCAAAGCGCTCTTATATTATG 57.587 36.000 12.06 0.00 31.02 1.90
2652 4715 8.361139 ACTAGTGTCAAAGCGCTCTTATATTAT 58.639 33.333 12.06 0.00 31.02 1.28
2653 4716 7.713750 ACTAGTGTCAAAGCGCTCTTATATTA 58.286 34.615 12.06 0.00 31.02 0.98
2654 4717 6.574350 ACTAGTGTCAAAGCGCTCTTATATT 58.426 36.000 12.06 0.00 31.02 1.28
2655 4718 6.150396 ACTAGTGTCAAAGCGCTCTTATAT 57.850 37.500 12.06 0.00 31.02 0.86
2656 4719 5.578005 ACTAGTGTCAAAGCGCTCTTATA 57.422 39.130 12.06 0.00 31.02 0.98
2657 4720 4.457834 ACTAGTGTCAAAGCGCTCTTAT 57.542 40.909 12.06 0.00 31.02 1.73
2658 4721 3.936372 ACTAGTGTCAAAGCGCTCTTA 57.064 42.857 12.06 0.00 31.02 2.10
2659 4722 2.821991 ACTAGTGTCAAAGCGCTCTT 57.178 45.000 12.06 4.51 0.00 2.85
2660 4723 2.416162 GCTACTAGTGTCAAAGCGCTCT 60.416 50.000 12.06 4.54 0.00 4.09
2661 4724 1.921230 GCTACTAGTGTCAAAGCGCTC 59.079 52.381 12.06 0.00 0.00 5.03
2662 4725 1.546476 AGCTACTAGTGTCAAAGCGCT 59.454 47.619 2.64 2.64 38.23 5.92
2663 4726 1.656095 CAGCTACTAGTGTCAAAGCGC 59.344 52.381 5.39 0.00 38.23 5.92
2664 4727 3.217599 TCAGCTACTAGTGTCAAAGCG 57.782 47.619 5.39 3.29 38.23 4.68
2665 4728 5.746245 CACTATCAGCTACTAGTGTCAAAGC 59.254 44.000 19.59 6.03 39.85 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.