Multiple sequence alignment - TraesCS7B01G295400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G295400 chr7B 100.000 2552 0 0 1 2552 532073784 532076335 0.000000e+00 4713
1 TraesCS7B01G295400 chr7B 91.754 861 46 7 1707 2549 648213450 648214303 0.000000e+00 1173
2 TraesCS7B01G295400 chr7B 94.656 131 7 0 1 131 204205070 204205200 1.200000e-48 204
3 TraesCS7B01G295400 chr5B 91.463 2003 132 6 567 2549 636962464 636964447 0.000000e+00 2715
4 TraesCS7B01G295400 chr1D 92.690 1628 103 9 926 2552 4787963 4786351 0.000000e+00 2333
5 TraesCS7B01G295400 chr1D 92.272 867 42 6 1707 2552 481624732 481623870 0.000000e+00 1206
6 TraesCS7B01G295400 chr1D 91.773 863 46 8 1707 2548 347251921 347251063 0.000000e+00 1177
7 TraesCS7B01G295400 chr1D 90.632 459 40 3 123 579 118506765 118506308 7.810000e-170 606
8 TraesCS7B01G295400 chr1D 90.372 457 42 2 124 579 202951738 202951283 1.310000e-167 599
9 TraesCS7B01G295400 chr1B 91.699 1566 101 6 1001 2548 628772877 628771323 0.000000e+00 2145
10 TraesCS7B01G295400 chr2B 92.531 1138 81 4 571 1705 19091936 19093072 0.000000e+00 1628
11 TraesCS7B01G295400 chr2B 90.317 1136 96 7 575 1705 71201261 71200135 0.000000e+00 1476
12 TraesCS7B01G295400 chr2B 90.283 1132 100 7 580 1705 173503419 173502292 0.000000e+00 1472
13 TraesCS7B01G295400 chr2B 90.850 459 37 4 124 579 737448379 737448835 6.040000e-171 610
14 TraesCS7B01G295400 chr2B 90.175 458 41 4 123 579 66768300 66768754 6.080000e-166 593
15 TraesCS7B01G295400 chr3B 93.097 1072 51 7 1496 2549 821268713 821269779 0.000000e+00 1548
16 TraesCS7B01G295400 chr3B 92.810 1071 55 6 1496 2548 821332239 821333305 0.000000e+00 1531
17 TraesCS7B01G295400 chr3B 89.520 1145 102 10 568 1702 440311319 440312455 0.000000e+00 1434
18 TraesCS7B01G295400 chr3B 91.946 149 10 2 1 148 114660973 114660826 9.250000e-50 207
19 TraesCS7B01G295400 chr7A 91.101 1135 93 5 577 1705 30966343 30967475 0.000000e+00 1530
20 TraesCS7B01G295400 chr7A 89.991 1129 94 12 580 1705 12744485 12743373 0.000000e+00 1441
21 TraesCS7B01G295400 chr7A 94.656 131 7 0 1 131 406457063 406456933 1.200000e-48 204
22 TraesCS7B01G295400 chr7A 93.382 136 9 0 1 136 225523284 225523149 4.310000e-48 202
23 TraesCS7B01G295400 chr7D 90.345 1129 99 8 580 1705 372082798 372083919 0.000000e+00 1472
24 TraesCS7B01G295400 chr7D 88.679 795 61 4 1707 2483 487833121 487832338 0.000000e+00 942
25 TraesCS7B01G295400 chr2A 90.088 1130 84 12 580 1705 677958469 677957364 0.000000e+00 1441
26 TraesCS7B01G295400 chr5D 87.979 1123 117 10 584 1702 257136361 257137469 0.000000e+00 1310
27 TraesCS7B01G295400 chr5D 90.810 457 39 3 124 579 118066922 118066468 2.170000e-170 608
28 TraesCS7B01G295400 chr6D 92.567 861 46 3 1707 2549 323167734 323168594 0.000000e+00 1219
29 TraesCS7B01G295400 chr6D 89.907 862 55 11 1710 2552 329895729 329894881 0.000000e+00 1081
30 TraesCS7B01G295400 chr6D 90.810 457 40 2 124 579 355157422 355157877 6.040000e-171 610
31 TraesCS7B01G295400 chr3D 92.486 865 42 5 1707 2549 4247298 4248161 0.000000e+00 1216
32 TraesCS7B01G295400 chr3D 90.217 460 40 4 124 579 607539184 607539642 1.690000e-166 595
33 TraesCS7B01G295400 chrUn 88.302 795 45 11 1707 2480 302374911 302375678 0.000000e+00 909
34 TraesCS7B01G295400 chr4D 90.810 457 40 2 124 579 462815809 462815354 6.040000e-171 610
35 TraesCS7B01G295400 chr4D 90.153 457 43 2 124 579 46615044 46614589 6.080000e-166 593
36 TraesCS7B01G295400 chr6B 96.800 125 4 0 1 125 41741903 41741779 2.570000e-50 209
37 TraesCS7B01G295400 chr6B 96.063 127 5 0 1 127 494511492 494511618 9.250000e-50 207
38 TraesCS7B01G295400 chr4B 96.063 127 5 0 1 127 540112594 540112468 9.250000e-50 207
39 TraesCS7B01G295400 chr4B 94.697 132 7 0 1 132 503956853 503956722 3.330000e-49 206
40 TraesCS7B01G295400 chr4A 94.656 131 7 0 1 131 183449709 183449579 1.200000e-48 204


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G295400 chr7B 532073784 532076335 2551 False 4713 4713 100.000 1 2552 1 chr7B.!!$F2 2551
1 TraesCS7B01G295400 chr7B 648213450 648214303 853 False 1173 1173 91.754 1707 2549 1 chr7B.!!$F3 842
2 TraesCS7B01G295400 chr5B 636962464 636964447 1983 False 2715 2715 91.463 567 2549 1 chr5B.!!$F1 1982
3 TraesCS7B01G295400 chr1D 4786351 4787963 1612 True 2333 2333 92.690 926 2552 1 chr1D.!!$R1 1626
4 TraesCS7B01G295400 chr1D 481623870 481624732 862 True 1206 1206 92.272 1707 2552 1 chr1D.!!$R5 845
5 TraesCS7B01G295400 chr1D 347251063 347251921 858 True 1177 1177 91.773 1707 2548 1 chr1D.!!$R4 841
6 TraesCS7B01G295400 chr1B 628771323 628772877 1554 True 2145 2145 91.699 1001 2548 1 chr1B.!!$R1 1547
7 TraesCS7B01G295400 chr2B 19091936 19093072 1136 False 1628 1628 92.531 571 1705 1 chr2B.!!$F1 1134
8 TraesCS7B01G295400 chr2B 71200135 71201261 1126 True 1476 1476 90.317 575 1705 1 chr2B.!!$R1 1130
9 TraesCS7B01G295400 chr2B 173502292 173503419 1127 True 1472 1472 90.283 580 1705 1 chr2B.!!$R2 1125
10 TraesCS7B01G295400 chr3B 821268713 821269779 1066 False 1548 1548 93.097 1496 2549 1 chr3B.!!$F2 1053
11 TraesCS7B01G295400 chr3B 821332239 821333305 1066 False 1531 1531 92.810 1496 2548 1 chr3B.!!$F3 1052
12 TraesCS7B01G295400 chr3B 440311319 440312455 1136 False 1434 1434 89.520 568 1702 1 chr3B.!!$F1 1134
13 TraesCS7B01G295400 chr7A 30966343 30967475 1132 False 1530 1530 91.101 577 1705 1 chr7A.!!$F1 1128
14 TraesCS7B01G295400 chr7A 12743373 12744485 1112 True 1441 1441 89.991 580 1705 1 chr7A.!!$R1 1125
15 TraesCS7B01G295400 chr7D 372082798 372083919 1121 False 1472 1472 90.345 580 1705 1 chr7D.!!$F1 1125
16 TraesCS7B01G295400 chr7D 487832338 487833121 783 True 942 942 88.679 1707 2483 1 chr7D.!!$R1 776
17 TraesCS7B01G295400 chr2A 677957364 677958469 1105 True 1441 1441 90.088 580 1705 1 chr2A.!!$R1 1125
18 TraesCS7B01G295400 chr5D 257136361 257137469 1108 False 1310 1310 87.979 584 1702 1 chr5D.!!$F1 1118
19 TraesCS7B01G295400 chr6D 323167734 323168594 860 False 1219 1219 92.567 1707 2549 1 chr6D.!!$F1 842
20 TraesCS7B01G295400 chr6D 329894881 329895729 848 True 1081 1081 89.907 1710 2552 1 chr6D.!!$R1 842
21 TraesCS7B01G295400 chr3D 4247298 4248161 863 False 1216 1216 92.486 1707 2549 1 chr3D.!!$F1 842
22 TraesCS7B01G295400 chrUn 302374911 302375678 767 False 909 909 88.302 1707 2480 1 chrUn.!!$F1 773

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
129 130 0.030908 GGGAGACGTATCAAGGAGCG 59.969 60.0 12.92 0.0 0.0 5.03 F
130 131 0.030908 GGAGACGTATCAAGGAGCGG 59.969 60.0 12.92 0.0 0.0 5.52 F
443 444 0.032952 GATGTTAGGTATGGCCGCGA 59.967 55.0 8.23 0.0 43.7 5.87 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1109 1129 0.105964 CTGGTTCCTCGGTGTGTGAA 59.894 55.0 0.0 0.0 0.00 3.18 R
1220 1242 0.311790 CTGCATGAACGCCAAACAGT 59.688 50.0 0.0 0.0 31.13 3.55 R
2258 2383 0.179001 AGCCCTAAACGCCACAAACT 60.179 50.0 0.0 0.0 0.00 2.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.344535 AACACCATGGCAGTTCTGC 58.655 52.632 13.04 15.41 0.00 4.26
19 20 0.178981 AACACCATGGCAGTTCTGCT 60.179 50.000 21.46 3.09 34.73 4.24
32 33 3.609853 AGTTCTGCTGAAAACAGTGTCA 58.390 40.909 7.68 0.00 36.50 3.58
33 34 3.624861 AGTTCTGCTGAAAACAGTGTCAG 59.375 43.478 7.68 9.34 43.46 3.51
34 35 3.266510 TCTGCTGAAAACAGTGTCAGT 57.733 42.857 13.57 0.00 42.72 3.41
35 36 3.198068 TCTGCTGAAAACAGTGTCAGTC 58.802 45.455 13.57 3.77 42.72 3.51
36 37 2.288666 TGCTGAAAACAGTGTCAGTCC 58.711 47.619 13.57 2.41 42.72 3.85
37 38 2.288666 GCTGAAAACAGTGTCAGTCCA 58.711 47.619 13.57 0.00 42.72 4.02
38 39 2.289002 GCTGAAAACAGTGTCAGTCCAG 59.711 50.000 13.57 8.71 42.72 3.86
39 40 2.874701 CTGAAAACAGTGTCAGTCCAGG 59.125 50.000 0.00 0.00 37.16 4.45
40 41 2.238646 TGAAAACAGTGTCAGTCCAGGT 59.761 45.455 0.00 0.00 0.00 4.00
41 42 3.279434 GAAAACAGTGTCAGTCCAGGTT 58.721 45.455 0.00 0.00 0.00 3.50
42 43 4.080807 TGAAAACAGTGTCAGTCCAGGTTA 60.081 41.667 0.00 0.00 0.00 2.85
43 44 3.753294 AACAGTGTCAGTCCAGGTTAG 57.247 47.619 0.00 0.00 0.00 2.34
44 45 2.679082 ACAGTGTCAGTCCAGGTTAGT 58.321 47.619 0.00 0.00 0.00 2.24
45 46 3.039011 ACAGTGTCAGTCCAGGTTAGTT 58.961 45.455 0.00 0.00 0.00 2.24
46 47 3.069729 ACAGTGTCAGTCCAGGTTAGTTC 59.930 47.826 0.00 0.00 0.00 3.01
47 48 2.633481 AGTGTCAGTCCAGGTTAGTTCC 59.367 50.000 0.00 0.00 0.00 3.62
48 49 2.367567 GTGTCAGTCCAGGTTAGTTCCA 59.632 50.000 0.00 0.00 0.00 3.53
49 50 3.008049 GTGTCAGTCCAGGTTAGTTCCAT 59.992 47.826 0.00 0.00 0.00 3.41
50 51 3.650942 TGTCAGTCCAGGTTAGTTCCATT 59.349 43.478 0.00 0.00 0.00 3.16
51 52 4.254492 GTCAGTCCAGGTTAGTTCCATTC 58.746 47.826 0.00 0.00 0.00 2.67
52 53 3.907474 TCAGTCCAGGTTAGTTCCATTCA 59.093 43.478 0.00 0.00 0.00 2.57
53 54 4.349636 TCAGTCCAGGTTAGTTCCATTCAA 59.650 41.667 0.00 0.00 0.00 2.69
54 55 5.070001 CAGTCCAGGTTAGTTCCATTCAAA 58.930 41.667 0.00 0.00 0.00 2.69
55 56 5.711976 CAGTCCAGGTTAGTTCCATTCAAAT 59.288 40.000 0.00 0.00 0.00 2.32
56 57 6.884295 CAGTCCAGGTTAGTTCCATTCAAATA 59.116 38.462 0.00 0.00 0.00 1.40
57 58 7.393234 CAGTCCAGGTTAGTTCCATTCAAATAA 59.607 37.037 0.00 0.00 0.00 1.40
58 59 8.116026 AGTCCAGGTTAGTTCCATTCAAATAAT 58.884 33.333 0.00 0.00 0.00 1.28
59 60 8.190784 GTCCAGGTTAGTTCCATTCAAATAATG 58.809 37.037 0.00 0.00 0.00 1.90
60 61 6.980397 CCAGGTTAGTTCCATTCAAATAATGC 59.020 38.462 0.00 0.00 0.00 3.56
61 62 7.363705 CCAGGTTAGTTCCATTCAAATAATGCA 60.364 37.037 0.00 0.00 0.00 3.96
62 63 8.034215 CAGGTTAGTTCCATTCAAATAATGCAA 58.966 33.333 0.00 0.00 0.00 4.08
63 64 8.253113 AGGTTAGTTCCATTCAAATAATGCAAG 58.747 33.333 0.00 0.00 0.00 4.01
64 65 8.034804 GGTTAGTTCCATTCAAATAATGCAAGT 58.965 33.333 0.00 0.00 0.00 3.16
65 66 9.423061 GTTAGTTCCATTCAAATAATGCAAGTT 57.577 29.630 0.00 0.00 0.00 2.66
68 69 9.023962 AGTTCCATTCAAATAATGCAAGTTAGA 57.976 29.630 0.00 0.00 0.00 2.10
69 70 9.294030 GTTCCATTCAAATAATGCAAGTTAGAG 57.706 33.333 0.00 0.00 0.00 2.43
70 71 8.579850 TCCATTCAAATAATGCAAGTTAGAGT 57.420 30.769 0.00 0.00 0.00 3.24
71 72 8.677300 TCCATTCAAATAATGCAAGTTAGAGTC 58.323 33.333 0.00 0.00 0.00 3.36
72 73 7.917505 CCATTCAAATAATGCAAGTTAGAGTCC 59.082 37.037 0.00 0.00 0.00 3.85
73 74 7.994425 TTCAAATAATGCAAGTTAGAGTCCA 57.006 32.000 0.00 0.00 0.00 4.02
74 75 7.994425 TCAAATAATGCAAGTTAGAGTCCAA 57.006 32.000 0.00 0.00 0.00 3.53
75 76 8.402798 TCAAATAATGCAAGTTAGAGTCCAAA 57.597 30.769 0.00 0.00 0.00 3.28
76 77 8.855110 TCAAATAATGCAAGTTAGAGTCCAAAA 58.145 29.630 0.00 0.00 0.00 2.44
77 78 8.915654 CAAATAATGCAAGTTAGAGTCCAAAAC 58.084 33.333 0.00 0.00 0.00 2.43
78 79 7.759489 ATAATGCAAGTTAGAGTCCAAAACA 57.241 32.000 0.00 0.00 0.00 2.83
79 80 6.463995 AATGCAAGTTAGAGTCCAAAACAA 57.536 33.333 0.00 0.00 0.00 2.83
80 81 5.499139 TGCAAGTTAGAGTCCAAAACAAG 57.501 39.130 0.00 0.00 0.00 3.16
81 82 4.338118 TGCAAGTTAGAGTCCAAAACAAGG 59.662 41.667 0.00 0.00 0.00 3.61
82 83 4.261614 GCAAGTTAGAGTCCAAAACAAGGG 60.262 45.833 4.12 0.00 0.00 3.95
83 84 5.130350 CAAGTTAGAGTCCAAAACAAGGGA 58.870 41.667 4.12 0.00 0.00 4.20
84 85 5.382664 AGTTAGAGTCCAAAACAAGGGAA 57.617 39.130 4.12 0.00 34.34 3.97
85 86 5.762279 AGTTAGAGTCCAAAACAAGGGAAA 58.238 37.500 4.12 0.00 34.34 3.13
86 87 6.192044 AGTTAGAGTCCAAAACAAGGGAAAA 58.808 36.000 4.12 0.00 34.34 2.29
87 88 6.666113 AGTTAGAGTCCAAAACAAGGGAAAAA 59.334 34.615 4.12 0.00 34.34 1.94
88 89 5.598416 AGAGTCCAAAACAAGGGAAAAAG 57.402 39.130 0.00 0.00 34.34 2.27
89 90 5.023452 AGAGTCCAAAACAAGGGAAAAAGT 58.977 37.500 0.00 0.00 34.34 2.66
90 91 5.084818 AGTCCAAAACAAGGGAAAAAGTG 57.915 39.130 0.00 0.00 34.34 3.16
91 92 4.530553 AGTCCAAAACAAGGGAAAAAGTGT 59.469 37.500 0.00 0.00 34.34 3.55
92 93 5.012664 AGTCCAAAACAAGGGAAAAAGTGTT 59.987 36.000 0.00 0.00 35.77 3.32
93 94 5.703592 GTCCAAAACAAGGGAAAAAGTGTTT 59.296 36.000 0.00 0.00 44.01 2.83
94 95 5.703130 TCCAAAACAAGGGAAAAAGTGTTTG 59.297 36.000 1.73 0.00 41.94 2.93
95 96 5.106357 CCAAAACAAGGGAAAAAGTGTTTGG 60.106 40.000 1.73 0.00 41.94 3.28
96 97 5.491323 AAACAAGGGAAAAAGTGTTTGGA 57.509 34.783 0.16 0.00 41.40 3.53
97 98 5.491323 AACAAGGGAAAAAGTGTTTGGAA 57.509 34.783 0.00 0.00 30.11 3.53
98 99 5.491323 ACAAGGGAAAAAGTGTTTGGAAA 57.509 34.783 0.00 0.00 0.00 3.13
99 100 5.870706 ACAAGGGAAAAAGTGTTTGGAAAA 58.129 33.333 0.00 0.00 0.00 2.29
100 101 5.937540 ACAAGGGAAAAAGTGTTTGGAAAAG 59.062 36.000 0.00 0.00 0.00 2.27
101 102 5.755409 AGGGAAAAAGTGTTTGGAAAAGT 57.245 34.783 0.00 0.00 0.00 2.66
102 103 6.860790 AGGGAAAAAGTGTTTGGAAAAGTA 57.139 33.333 0.00 0.00 0.00 2.24
103 104 6.873997 AGGGAAAAAGTGTTTGGAAAAGTAG 58.126 36.000 0.00 0.00 0.00 2.57
104 105 6.666113 AGGGAAAAAGTGTTTGGAAAAGTAGA 59.334 34.615 0.00 0.00 0.00 2.59
105 106 7.344612 AGGGAAAAAGTGTTTGGAAAAGTAGAT 59.655 33.333 0.00 0.00 0.00 1.98
106 107 8.635328 GGGAAAAAGTGTTTGGAAAAGTAGATA 58.365 33.333 0.00 0.00 0.00 1.98
107 108 9.459640 GGAAAAAGTGTTTGGAAAAGTAGATAC 57.540 33.333 0.00 0.00 0.00 2.24
108 109 9.166126 GAAAAAGTGTTTGGAAAAGTAGATACG 57.834 33.333 0.00 0.00 0.00 3.06
109 110 8.441312 AAAAGTGTTTGGAAAAGTAGATACGA 57.559 30.769 0.00 0.00 0.00 3.43
110 111 7.653767 AAGTGTTTGGAAAAGTAGATACGAG 57.346 36.000 0.00 0.00 0.00 4.18
111 112 6.164176 AGTGTTTGGAAAAGTAGATACGAGG 58.836 40.000 0.00 0.00 0.00 4.63
112 113 5.350640 GTGTTTGGAAAAGTAGATACGAGGG 59.649 44.000 0.00 0.00 0.00 4.30
113 114 5.246656 TGTTTGGAAAAGTAGATACGAGGGA 59.753 40.000 0.00 0.00 0.00 4.20
114 115 5.593679 TTGGAAAAGTAGATACGAGGGAG 57.406 43.478 0.00 0.00 0.00 4.30
115 116 4.863548 TGGAAAAGTAGATACGAGGGAGA 58.136 43.478 0.00 0.00 0.00 3.71
116 117 4.643784 TGGAAAAGTAGATACGAGGGAGAC 59.356 45.833 0.00 0.00 0.00 3.36
117 118 4.261114 GGAAAAGTAGATACGAGGGAGACG 60.261 50.000 0.00 0.00 0.00 4.18
118 119 3.557228 AAGTAGATACGAGGGAGACGT 57.443 47.619 0.00 0.00 45.75 4.34
125 126 1.390565 ACGAGGGAGACGTATCAAGG 58.609 55.000 12.92 0.63 42.17 3.61
126 127 1.064906 ACGAGGGAGACGTATCAAGGA 60.065 52.381 12.92 0.00 42.17 3.36
127 128 1.604755 CGAGGGAGACGTATCAAGGAG 59.395 57.143 12.92 0.00 0.00 3.69
128 129 1.338655 GAGGGAGACGTATCAAGGAGC 59.661 57.143 12.92 0.00 0.00 4.70
129 130 0.030908 GGGAGACGTATCAAGGAGCG 59.969 60.000 12.92 0.00 0.00 5.03
130 131 0.030908 GGAGACGTATCAAGGAGCGG 59.969 60.000 12.92 0.00 0.00 5.52
131 132 0.595310 GAGACGTATCAAGGAGCGGC 60.595 60.000 5.07 0.00 0.00 6.53
132 133 1.141019 GACGTATCAAGGAGCGGCA 59.859 57.895 1.45 0.00 31.89 5.69
133 134 0.249489 GACGTATCAAGGAGCGGCAT 60.249 55.000 1.45 0.00 31.89 4.40
134 135 0.530650 ACGTATCAAGGAGCGGCATG 60.531 55.000 1.45 0.00 0.00 4.06
135 136 1.224069 CGTATCAAGGAGCGGCATGG 61.224 60.000 1.45 0.00 0.00 3.66
136 137 1.227943 TATCAAGGAGCGGCATGGC 60.228 57.895 9.69 9.69 0.00 4.40
137 138 1.981951 TATCAAGGAGCGGCATGGCA 61.982 55.000 20.37 0.00 34.64 4.92
138 139 2.635787 ATCAAGGAGCGGCATGGCAT 62.636 55.000 20.37 6.90 34.64 4.40
139 140 2.517875 AAGGAGCGGCATGGCATC 60.518 61.111 20.37 15.59 34.64 3.91
140 141 3.052909 AAGGAGCGGCATGGCATCT 62.053 57.895 20.37 14.91 34.64 2.90
141 142 3.285215 GGAGCGGCATGGCATCTG 61.285 66.667 20.37 3.69 34.64 2.90
142 143 3.285215 GAGCGGCATGGCATCTGG 61.285 66.667 20.37 3.29 34.64 3.86
150 151 3.690280 TGGCATCTGGCACGTCGA 61.690 61.111 0.00 0.00 46.12 4.20
151 152 3.932580 TGGCATCTGGCACGTCGAC 62.933 63.158 5.18 5.18 46.12 4.20
152 153 2.432456 GCATCTGGCACGTCGACA 60.432 61.111 17.16 0.00 43.97 4.35
153 154 1.811266 GCATCTGGCACGTCGACAT 60.811 57.895 17.16 0.00 43.97 3.06
154 155 1.756375 GCATCTGGCACGTCGACATC 61.756 60.000 17.16 3.24 43.97 3.06
155 156 1.226688 ATCTGGCACGTCGACATCG 60.227 57.895 17.16 4.16 41.45 3.84
156 157 2.613739 ATCTGGCACGTCGACATCGG 62.614 60.000 17.16 6.64 40.29 4.18
163 164 3.823330 GTCGACATCGGCGGGTCT 61.823 66.667 23.08 0.00 40.29 3.85
164 165 3.515286 TCGACATCGGCGGGTCTC 61.515 66.667 23.08 7.59 40.29 3.36
165 166 3.822192 CGACATCGGCGGGTCTCA 61.822 66.667 23.08 0.00 35.37 3.27
166 167 2.105128 GACATCGGCGGGTCTCAG 59.895 66.667 20.17 2.06 0.00 3.35
167 168 4.148825 ACATCGGCGGGTCTCAGC 62.149 66.667 7.21 0.00 0.00 4.26
174 175 4.147449 CGGGTCTCAGCGGCATGA 62.147 66.667 1.45 2.37 0.00 3.07
175 176 2.268920 GGGTCTCAGCGGCATGAA 59.731 61.111 1.45 0.00 0.00 2.57
176 177 1.817099 GGGTCTCAGCGGCATGAAG 60.817 63.158 1.45 0.00 0.00 3.02
177 178 2.467826 GGTCTCAGCGGCATGAAGC 61.468 63.158 1.45 0.00 44.65 3.86
186 187 3.425422 GCATGAAGCATCGGGGTC 58.575 61.111 0.00 0.00 44.79 4.46
187 188 1.153086 GCATGAAGCATCGGGGTCT 60.153 57.895 0.00 0.00 44.79 3.85
188 189 1.162800 GCATGAAGCATCGGGGTCTC 61.163 60.000 0.00 0.00 44.79 3.36
189 190 0.877649 CATGAAGCATCGGGGTCTCG 60.878 60.000 0.00 0.00 0.00 4.04
190 191 2.586357 GAAGCATCGGGGTCTCGC 60.586 66.667 0.00 0.00 0.00 5.03
191 192 3.077556 AAGCATCGGGGTCTCGCT 61.078 61.111 0.00 0.00 33.45 4.93
192 193 3.376935 AAGCATCGGGGTCTCGCTG 62.377 63.158 0.00 0.00 32.14 5.18
193 194 4.899239 GCATCGGGGTCTCGCTGG 62.899 72.222 0.00 0.00 0.00 4.85
194 195 3.461773 CATCGGGGTCTCGCTGGT 61.462 66.667 0.00 0.00 0.00 4.00
195 196 3.461773 ATCGGGGTCTCGCTGGTG 61.462 66.667 0.00 0.00 0.00 4.17
206 207 3.434319 GCTGGTGGGCGTGTGATG 61.434 66.667 0.00 0.00 0.00 3.07
207 208 2.347114 CTGGTGGGCGTGTGATGA 59.653 61.111 0.00 0.00 0.00 2.92
208 209 1.078214 CTGGTGGGCGTGTGATGAT 60.078 57.895 0.00 0.00 0.00 2.45
209 210 1.371337 CTGGTGGGCGTGTGATGATG 61.371 60.000 0.00 0.00 0.00 3.07
210 211 2.114670 GGTGGGCGTGTGATGATGG 61.115 63.158 0.00 0.00 0.00 3.51
211 212 1.078497 GTGGGCGTGTGATGATGGA 60.078 57.895 0.00 0.00 0.00 3.41
212 213 1.078497 TGGGCGTGTGATGATGGAC 60.078 57.895 0.00 0.00 0.00 4.02
213 214 2.173669 GGGCGTGTGATGATGGACG 61.174 63.158 0.00 0.00 34.93 4.79
214 215 1.153647 GGCGTGTGATGATGGACGA 60.154 57.895 0.00 0.00 33.64 4.20
215 216 1.148157 GGCGTGTGATGATGGACGAG 61.148 60.000 0.00 0.00 33.64 4.18
216 217 0.458543 GCGTGTGATGATGGACGAGT 60.459 55.000 0.00 0.00 33.64 4.18
217 218 1.271876 CGTGTGATGATGGACGAGTG 58.728 55.000 0.00 0.00 33.64 3.51
218 219 1.402852 CGTGTGATGATGGACGAGTGT 60.403 52.381 0.00 0.00 33.64 3.55
219 220 2.159435 CGTGTGATGATGGACGAGTGTA 60.159 50.000 0.00 0.00 33.64 2.90
220 221 3.439293 GTGTGATGATGGACGAGTGTAG 58.561 50.000 0.00 0.00 0.00 2.74
221 222 2.427095 TGTGATGATGGACGAGTGTAGG 59.573 50.000 0.00 0.00 0.00 3.18
222 223 2.688446 GTGATGATGGACGAGTGTAGGA 59.312 50.000 0.00 0.00 0.00 2.94
223 224 3.319405 GTGATGATGGACGAGTGTAGGAT 59.681 47.826 0.00 0.00 0.00 3.24
224 225 3.319122 TGATGATGGACGAGTGTAGGATG 59.681 47.826 0.00 0.00 0.00 3.51
225 226 3.012934 TGATGGACGAGTGTAGGATGA 57.987 47.619 0.00 0.00 0.00 2.92
226 227 3.566351 TGATGGACGAGTGTAGGATGAT 58.434 45.455 0.00 0.00 0.00 2.45
227 228 3.319122 TGATGGACGAGTGTAGGATGATG 59.681 47.826 0.00 0.00 0.00 3.07
228 229 2.031870 TGGACGAGTGTAGGATGATGG 58.968 52.381 0.00 0.00 0.00 3.51
229 230 1.269831 GGACGAGTGTAGGATGATGGC 60.270 57.143 0.00 0.00 0.00 4.40
230 231 0.385751 ACGAGTGTAGGATGATGGCG 59.614 55.000 0.00 0.00 0.00 5.69
231 232 0.385751 CGAGTGTAGGATGATGGCGT 59.614 55.000 0.00 0.00 0.00 5.68
232 233 1.202417 CGAGTGTAGGATGATGGCGTT 60.202 52.381 0.00 0.00 0.00 4.84
233 234 2.205074 GAGTGTAGGATGATGGCGTTG 58.795 52.381 0.00 0.00 0.00 4.10
234 235 1.555075 AGTGTAGGATGATGGCGTTGT 59.445 47.619 0.00 0.00 0.00 3.32
235 236 1.933853 GTGTAGGATGATGGCGTTGTC 59.066 52.381 0.00 0.00 0.00 3.18
236 237 1.831106 TGTAGGATGATGGCGTTGTCT 59.169 47.619 0.00 0.00 0.00 3.41
237 238 2.205074 GTAGGATGATGGCGTTGTCTG 58.795 52.381 0.00 0.00 0.00 3.51
238 239 0.107508 AGGATGATGGCGTTGTCTGG 60.108 55.000 0.00 0.00 0.00 3.86
239 240 1.718757 GGATGATGGCGTTGTCTGGC 61.719 60.000 0.00 0.00 0.00 4.85
240 241 2.040213 GATGATGGCGTTGTCTGGCG 62.040 60.000 0.00 0.00 34.03 5.69
241 242 2.742372 GATGGCGTTGTCTGGCGT 60.742 61.111 0.00 0.00 34.03 5.68
242 243 2.740714 GATGGCGTTGTCTGGCGTC 61.741 63.158 0.00 0.00 40.15 5.19
245 246 4.059459 GCGTTGTCTGGCGTCGTG 62.059 66.667 0.00 0.00 0.00 4.35
246 247 3.403057 CGTTGTCTGGCGTCGTGG 61.403 66.667 0.00 0.00 0.00 4.94
247 248 2.279918 GTTGTCTGGCGTCGTGGT 60.280 61.111 0.00 0.00 0.00 4.16
248 249 2.279851 TTGTCTGGCGTCGTGGTG 60.280 61.111 0.00 0.00 0.00 4.17
249 250 3.800685 TTGTCTGGCGTCGTGGTGG 62.801 63.158 0.00 0.00 0.00 4.61
256 257 2.202743 CGTCGTGGTGGCATCGAT 60.203 61.111 13.36 0.00 36.08 3.59
257 258 2.516589 CGTCGTGGTGGCATCGATG 61.517 63.158 21.27 21.27 36.08 3.84
258 259 1.153647 GTCGTGGTGGCATCGATGA 60.154 57.895 29.20 6.11 36.08 2.92
259 260 1.153647 TCGTGGTGGCATCGATGAC 60.154 57.895 29.20 27.08 35.98 3.06
260 261 1.447663 CGTGGTGGCATCGATGACA 60.448 57.895 30.03 30.03 45.19 3.58
265 266 3.974222 TGGCATCGATGACAGCTAG 57.026 52.632 30.03 0.00 41.84 3.42
266 267 1.402787 TGGCATCGATGACAGCTAGA 58.597 50.000 30.03 6.19 41.84 2.43
267 268 1.067669 TGGCATCGATGACAGCTAGAC 59.932 52.381 30.03 7.55 41.84 2.59
268 269 1.604185 GGCATCGATGACAGCTAGACC 60.604 57.143 29.20 12.83 35.34 3.85
269 270 1.928152 GCATCGATGACAGCTAGACCG 60.928 57.143 29.20 0.00 0.00 4.79
270 271 0.955178 ATCGATGACAGCTAGACCGG 59.045 55.000 0.00 0.00 0.00 5.28
271 272 1.101635 TCGATGACAGCTAGACCGGG 61.102 60.000 6.32 0.00 0.00 5.73
272 273 1.068250 GATGACAGCTAGACCGGGC 59.932 63.158 6.32 0.52 0.00 6.13
273 274 1.676678 GATGACAGCTAGACCGGGCA 61.677 60.000 11.69 0.00 0.00 5.36
274 275 1.264749 ATGACAGCTAGACCGGGCAA 61.265 55.000 11.69 0.00 0.00 4.52
275 276 1.153549 GACAGCTAGACCGGGCAAG 60.154 63.158 11.69 1.80 0.00 4.01
276 277 2.187946 CAGCTAGACCGGGCAAGG 59.812 66.667 11.69 0.00 37.30 3.61
278 279 1.001248 AGCTAGACCGGGCAAGGTA 59.999 57.895 11.69 0.00 46.09 3.08
279 280 1.043673 AGCTAGACCGGGCAAGGTAG 61.044 60.000 11.69 2.87 46.09 3.18
280 281 1.041447 GCTAGACCGGGCAAGGTAGA 61.041 60.000 11.69 0.00 46.09 2.59
281 282 1.705873 CTAGACCGGGCAAGGTAGAT 58.294 55.000 11.69 0.00 46.09 1.98
282 283 1.341531 CTAGACCGGGCAAGGTAGATG 59.658 57.143 11.69 0.00 46.09 2.90
283 284 0.617820 AGACCGGGCAAGGTAGATGT 60.618 55.000 11.69 0.00 46.09 3.06
284 285 1.117150 GACCGGGCAAGGTAGATGTA 58.883 55.000 0.00 0.00 46.09 2.29
285 286 1.068741 GACCGGGCAAGGTAGATGTAG 59.931 57.143 0.00 0.00 46.09 2.74
286 287 0.249911 CCGGGCAAGGTAGATGTAGC 60.250 60.000 0.00 0.00 0.00 3.58
287 288 0.464036 CGGGCAAGGTAGATGTAGCA 59.536 55.000 1.61 0.00 0.00 3.49
288 289 1.539065 CGGGCAAGGTAGATGTAGCAG 60.539 57.143 1.61 0.00 0.00 4.24
289 290 1.486726 GGGCAAGGTAGATGTAGCAGT 59.513 52.381 1.61 0.00 0.00 4.40
290 291 2.698797 GGGCAAGGTAGATGTAGCAGTA 59.301 50.000 1.61 0.00 0.00 2.74
291 292 3.492829 GGGCAAGGTAGATGTAGCAGTAC 60.493 52.174 1.61 0.00 0.00 2.73
292 293 3.132289 GGCAAGGTAGATGTAGCAGTACA 59.868 47.826 1.61 0.00 43.43 2.90
293 294 4.363999 GCAAGGTAGATGTAGCAGTACAG 58.636 47.826 1.61 0.00 42.53 2.74
294 295 4.363999 CAAGGTAGATGTAGCAGTACAGC 58.636 47.826 1.29 1.29 44.49 4.40
295 296 3.632333 AGGTAGATGTAGCAGTACAGCA 58.368 45.455 13.16 0.00 46.21 4.41
296 297 3.381908 AGGTAGATGTAGCAGTACAGCAC 59.618 47.826 13.16 9.02 46.21 4.40
297 298 3.381908 GGTAGATGTAGCAGTACAGCACT 59.618 47.826 13.16 6.19 46.21 4.40
298 299 4.579340 GGTAGATGTAGCAGTACAGCACTA 59.421 45.833 13.16 5.34 46.21 2.74
299 300 5.067413 GGTAGATGTAGCAGTACAGCACTAA 59.933 44.000 13.16 0.00 46.21 2.24
300 301 5.661056 AGATGTAGCAGTACAGCACTAAA 57.339 39.130 13.16 0.00 46.21 1.85
301 302 5.655488 AGATGTAGCAGTACAGCACTAAAG 58.345 41.667 13.16 0.00 46.21 1.85
302 303 5.419155 AGATGTAGCAGTACAGCACTAAAGA 59.581 40.000 13.16 0.00 46.21 2.52
303 304 5.661056 TGTAGCAGTACAGCACTAAAGAT 57.339 39.130 13.16 0.00 34.98 2.40
304 305 5.410924 TGTAGCAGTACAGCACTAAAGATG 58.589 41.667 13.16 0.00 34.98 2.90
305 306 4.808414 AGCAGTACAGCACTAAAGATGA 57.192 40.909 13.16 0.00 34.98 2.92
306 307 5.152623 AGCAGTACAGCACTAAAGATGAA 57.847 39.130 13.16 0.00 34.98 2.57
307 308 5.738909 AGCAGTACAGCACTAAAGATGAAT 58.261 37.500 13.16 0.00 34.98 2.57
308 309 6.176183 AGCAGTACAGCACTAAAGATGAATT 58.824 36.000 13.16 0.00 34.98 2.17
309 310 6.093219 AGCAGTACAGCACTAAAGATGAATTG 59.907 38.462 13.16 0.00 34.98 2.32
310 311 6.676456 GCAGTACAGCACTAAAGATGAATTGG 60.676 42.308 5.23 0.00 34.98 3.16
311 312 6.372659 CAGTACAGCACTAAAGATGAATTGGT 59.627 38.462 0.00 0.00 34.98 3.67
312 313 5.633830 ACAGCACTAAAGATGAATTGGTG 57.366 39.130 0.00 0.00 40.83 4.17
313 314 4.460382 ACAGCACTAAAGATGAATTGGTGG 59.540 41.667 5.19 0.00 39.02 4.61
314 315 3.445096 AGCACTAAAGATGAATTGGTGGC 59.555 43.478 5.19 0.00 39.02 5.01
315 316 3.193267 GCACTAAAGATGAATTGGTGGCA 59.807 43.478 5.19 0.00 39.02 4.92
316 317 4.676196 GCACTAAAGATGAATTGGTGGCAG 60.676 45.833 5.19 0.00 39.02 4.85
317 318 4.019174 ACTAAAGATGAATTGGTGGCAGG 58.981 43.478 0.00 0.00 0.00 4.85
318 319 2.610438 AAGATGAATTGGTGGCAGGT 57.390 45.000 0.00 0.00 0.00 4.00
319 320 1.843368 AGATGAATTGGTGGCAGGTG 58.157 50.000 0.00 0.00 0.00 4.00
320 321 0.819582 GATGAATTGGTGGCAGGTGG 59.180 55.000 0.00 0.00 0.00 4.61
321 322 1.259840 ATGAATTGGTGGCAGGTGGC 61.260 55.000 0.00 0.00 43.74 5.01
322 323 1.607467 GAATTGGTGGCAGGTGGCT 60.607 57.895 5.03 0.00 44.01 4.75
323 324 1.880819 GAATTGGTGGCAGGTGGCTG 61.881 60.000 5.03 0.00 44.01 4.85
338 339 4.427394 CTGCGACAGCCTCATACC 57.573 61.111 0.00 0.00 44.33 2.73
339 340 1.227380 CTGCGACAGCCTCATACCC 60.227 63.158 0.00 0.00 44.33 3.69
340 341 2.279517 GCGACAGCCTCATACCCG 60.280 66.667 0.00 0.00 37.42 5.28
341 342 2.417516 CGACAGCCTCATACCCGG 59.582 66.667 0.00 0.00 0.00 5.73
342 343 2.109181 GACAGCCTCATACCCGGC 59.891 66.667 0.00 0.00 46.65 6.13
346 347 4.937431 GCCTCATACCCGGCAGGC 62.937 72.222 0.00 3.18 45.59 4.85
347 348 3.479203 CCTCATACCCGGCAGGCA 61.479 66.667 0.00 0.00 40.58 4.75
348 349 2.822637 CCTCATACCCGGCAGGCAT 61.823 63.158 0.00 0.00 40.58 4.40
349 350 1.302033 CTCATACCCGGCAGGCATC 60.302 63.158 0.00 0.00 40.58 3.91
350 351 2.281761 CATACCCGGCAGGCATCC 60.282 66.667 0.00 0.00 40.58 3.51
351 352 2.448542 ATACCCGGCAGGCATCCT 60.449 61.111 0.00 0.00 40.58 3.24
365 366 3.059982 TCCTGGTTGAGGAGTGCG 58.940 61.111 0.00 0.00 46.96 5.34
366 367 2.743928 CCTGGTTGAGGAGTGCGC 60.744 66.667 0.00 0.00 46.33 6.09
367 368 3.114616 CTGGTTGAGGAGTGCGCG 61.115 66.667 0.00 0.00 0.00 6.86
383 384 4.814294 CGCGGACTAGTGGGTGCC 62.814 72.222 0.00 0.00 0.00 5.01
384 385 3.391382 GCGGACTAGTGGGTGCCT 61.391 66.667 0.00 0.00 0.00 4.75
385 386 2.893398 CGGACTAGTGGGTGCCTC 59.107 66.667 0.00 0.00 0.00 4.70
386 387 1.982395 CGGACTAGTGGGTGCCTCA 60.982 63.158 0.00 0.00 0.00 3.86
387 388 1.330655 CGGACTAGTGGGTGCCTCAT 61.331 60.000 0.00 0.00 0.00 2.90
388 389 1.789523 GGACTAGTGGGTGCCTCATA 58.210 55.000 0.00 0.00 0.00 2.15
389 390 1.413077 GGACTAGTGGGTGCCTCATAC 59.587 57.143 0.00 0.00 0.00 2.39
390 391 1.413077 GACTAGTGGGTGCCTCATACC 59.587 57.143 0.00 0.00 37.48 2.73
398 399 2.980233 GCCTCATACCCGGCATGC 60.980 66.667 9.90 9.90 45.59 4.06
399 400 2.666190 CCTCATACCCGGCATGCG 60.666 66.667 12.44 7.08 0.00 4.73
400 401 2.108976 CTCATACCCGGCATGCGT 59.891 61.111 12.44 6.78 0.00 5.24
401 402 1.956170 CTCATACCCGGCATGCGTC 60.956 63.158 12.44 0.00 0.00 5.19
402 403 2.972505 CATACCCGGCATGCGTCC 60.973 66.667 12.44 0.00 0.00 4.79
403 404 3.161450 ATACCCGGCATGCGTCCT 61.161 61.111 12.44 0.00 0.00 3.85
404 405 3.460672 ATACCCGGCATGCGTCCTG 62.461 63.158 12.44 0.63 0.00 3.86
406 407 4.552365 CCCGGCATGCGTCCTGAT 62.552 66.667 12.44 0.00 0.00 2.90
407 408 2.514592 CCGGCATGCGTCCTGATT 60.515 61.111 12.44 0.00 0.00 2.57
408 409 1.227527 CCGGCATGCGTCCTGATTA 60.228 57.895 12.44 0.00 0.00 1.75
409 410 1.224069 CCGGCATGCGTCCTGATTAG 61.224 60.000 12.44 0.00 0.00 1.73
410 411 1.224069 CGGCATGCGTCCTGATTAGG 61.224 60.000 12.44 0.00 46.06 2.69
433 434 4.949121 ACCTCAGGTCTTAGATGTTAGGT 58.051 43.478 0.00 4.26 0.00 3.08
434 435 6.088541 ACCTCAGGTCTTAGATGTTAGGTA 57.911 41.667 0.00 0.00 33.17 3.08
435 436 6.684538 ACCTCAGGTCTTAGATGTTAGGTAT 58.315 40.000 0.00 0.00 33.17 2.73
436 437 6.551601 ACCTCAGGTCTTAGATGTTAGGTATG 59.448 42.308 0.00 0.00 33.17 2.39
437 438 6.015010 CCTCAGGTCTTAGATGTTAGGTATGG 60.015 46.154 0.00 0.00 0.00 2.74
438 439 5.304614 TCAGGTCTTAGATGTTAGGTATGGC 59.695 44.000 0.00 0.00 0.00 4.40
439 440 4.593634 AGGTCTTAGATGTTAGGTATGGCC 59.406 45.833 0.00 0.00 37.58 5.36
440 441 4.557205 GTCTTAGATGTTAGGTATGGCCG 58.443 47.826 0.00 0.00 43.70 6.13
441 442 3.006537 TCTTAGATGTTAGGTATGGCCGC 59.993 47.826 0.00 0.00 43.70 6.53
442 443 0.033504 AGATGTTAGGTATGGCCGCG 59.966 55.000 0.00 0.00 43.70 6.46
443 444 0.032952 GATGTTAGGTATGGCCGCGA 59.967 55.000 8.23 0.00 43.70 5.87
444 445 0.033504 ATGTTAGGTATGGCCGCGAG 59.966 55.000 8.23 0.00 43.70 5.03
460 461 4.966850 CGCGAGGTATGTTTGGTATTAG 57.033 45.455 0.00 0.00 0.00 1.73
461 462 3.739300 CGCGAGGTATGTTTGGTATTAGG 59.261 47.826 0.00 0.00 0.00 2.69
462 463 3.497262 GCGAGGTATGTTTGGTATTAGGC 59.503 47.826 0.00 0.00 0.00 3.93
463 464 4.062991 CGAGGTATGTTTGGTATTAGGCC 58.937 47.826 0.00 0.00 0.00 5.19
464 465 4.202326 CGAGGTATGTTTGGTATTAGGCCT 60.202 45.833 11.78 11.78 0.00 5.19
465 466 5.011329 CGAGGTATGTTTGGTATTAGGCCTA 59.989 44.000 8.91 8.91 0.00 3.93
466 467 6.435292 AGGTATGTTTGGTATTAGGCCTAG 57.565 41.667 13.36 0.00 0.00 3.02
467 468 6.148186 AGGTATGTTTGGTATTAGGCCTAGA 58.852 40.000 13.36 4.86 0.00 2.43
468 469 6.042897 AGGTATGTTTGGTATTAGGCCTAGAC 59.957 42.308 13.36 14.61 0.00 2.59
469 470 6.042897 GGTATGTTTGGTATTAGGCCTAGACT 59.957 42.308 20.51 10.57 0.00 3.24
470 471 7.234166 GGTATGTTTGGTATTAGGCCTAGACTA 59.766 40.741 20.51 14.87 0.00 2.59
471 472 7.873699 ATGTTTGGTATTAGGCCTAGACTAT 57.126 36.000 20.51 11.93 0.00 2.12
472 473 8.967779 ATGTTTGGTATTAGGCCTAGACTATA 57.032 34.615 20.51 11.07 0.00 1.31
473 474 8.418597 TGTTTGGTATTAGGCCTAGACTATAG 57.581 38.462 20.51 0.00 0.00 1.31
474 475 7.039223 TGTTTGGTATTAGGCCTAGACTATAGC 60.039 40.741 20.51 19.47 0.00 2.97
475 476 6.148735 TGGTATTAGGCCTAGACTATAGCA 57.851 41.667 21.92 21.92 0.00 3.49
476 477 6.742756 TGGTATTAGGCCTAGACTATAGCAT 58.257 40.000 21.92 10.32 0.00 3.79
477 478 6.834451 TGGTATTAGGCCTAGACTATAGCATC 59.166 42.308 21.92 8.40 0.00 3.91
478 479 6.265876 GGTATTAGGCCTAGACTATAGCATCC 59.734 46.154 19.64 8.03 0.00 3.51
479 480 3.108847 AGGCCTAGACTATAGCATCCC 57.891 52.381 1.29 0.00 0.00 3.85
480 481 2.657459 AGGCCTAGACTATAGCATCCCT 59.343 50.000 1.29 0.00 0.00 4.20
481 482 3.078305 AGGCCTAGACTATAGCATCCCTT 59.922 47.826 1.29 0.00 0.00 3.95
482 483 3.449377 GGCCTAGACTATAGCATCCCTTC 59.551 52.174 0.00 0.00 0.00 3.46
483 484 4.090090 GCCTAGACTATAGCATCCCTTCA 58.910 47.826 0.00 0.00 0.00 3.02
484 485 4.714308 GCCTAGACTATAGCATCCCTTCAT 59.286 45.833 0.00 0.00 0.00 2.57
485 486 5.163457 GCCTAGACTATAGCATCCCTTCATC 60.163 48.000 0.00 0.00 0.00 2.92
486 487 5.954752 CCTAGACTATAGCATCCCTTCATCA 59.045 44.000 0.00 0.00 0.00 3.07
487 488 6.438741 CCTAGACTATAGCATCCCTTCATCAA 59.561 42.308 0.00 0.00 0.00 2.57
488 489 6.107901 AGACTATAGCATCCCTTCATCAAC 57.892 41.667 0.00 0.00 0.00 3.18
489 490 5.843421 AGACTATAGCATCCCTTCATCAACT 59.157 40.000 0.00 0.00 0.00 3.16
490 491 6.014669 AGACTATAGCATCCCTTCATCAACTC 60.015 42.308 0.00 0.00 0.00 3.01
491 492 2.322355 AGCATCCCTTCATCAACTCG 57.678 50.000 0.00 0.00 0.00 4.18
492 493 1.833630 AGCATCCCTTCATCAACTCGA 59.166 47.619 0.00 0.00 0.00 4.04
493 494 2.437281 AGCATCCCTTCATCAACTCGAT 59.563 45.455 0.00 0.00 33.27 3.59
494 495 3.643320 AGCATCCCTTCATCAACTCGATA 59.357 43.478 0.00 0.00 31.20 2.92
495 496 3.993081 GCATCCCTTCATCAACTCGATAG 59.007 47.826 0.00 0.00 31.20 2.08
496 497 4.564041 CATCCCTTCATCAACTCGATAGG 58.436 47.826 0.00 0.00 31.76 2.57
497 498 3.910989 TCCCTTCATCAACTCGATAGGA 58.089 45.455 0.00 0.00 33.22 2.94
507 508 2.953640 CTCGATAGGAGTAGCGACAC 57.046 55.000 0.00 0.00 41.97 3.67
508 509 2.485903 CTCGATAGGAGTAGCGACACT 58.514 52.381 0.00 0.00 41.97 3.55
509 510 2.873472 CTCGATAGGAGTAGCGACACTT 59.127 50.000 0.00 0.00 41.97 3.16
510 511 2.612672 TCGATAGGAGTAGCGACACTTG 59.387 50.000 0.00 0.00 41.97 3.16
511 512 2.355132 CGATAGGAGTAGCGACACTTGT 59.645 50.000 0.00 0.00 40.59 3.16
512 513 3.181499 CGATAGGAGTAGCGACACTTGTT 60.181 47.826 0.00 0.00 40.59 2.83
513 514 2.440539 AGGAGTAGCGACACTTGTTG 57.559 50.000 0.00 0.00 0.00 3.33
523 524 3.531538 CGACACTTGTTGCCTATATGGT 58.468 45.455 0.00 0.00 38.35 3.55
524 525 3.309682 CGACACTTGTTGCCTATATGGTG 59.690 47.826 0.00 0.00 38.35 4.17
525 526 3.620488 ACACTTGTTGCCTATATGGTGG 58.380 45.455 0.00 0.00 38.35 4.61
534 535 4.625607 GCCTATATGGTGGCTTTAGTCT 57.374 45.455 8.40 0.00 45.26 3.24
535 536 4.974399 GCCTATATGGTGGCTTTAGTCTT 58.026 43.478 8.40 0.00 45.26 3.01
536 537 6.110411 GCCTATATGGTGGCTTTAGTCTTA 57.890 41.667 8.40 0.00 45.26 2.10
537 538 5.932883 GCCTATATGGTGGCTTTAGTCTTAC 59.067 44.000 8.40 0.00 45.26 2.34
538 539 6.239629 GCCTATATGGTGGCTTTAGTCTTACT 60.240 42.308 8.40 0.00 45.26 2.24
539 540 7.155328 CCTATATGGTGGCTTTAGTCTTACTG 58.845 42.308 0.00 0.00 0.00 2.74
540 541 4.910458 ATGGTGGCTTTAGTCTTACTGT 57.090 40.909 0.00 0.00 0.00 3.55
541 542 4.699925 TGGTGGCTTTAGTCTTACTGTT 57.300 40.909 0.00 0.00 0.00 3.16
542 543 4.385825 TGGTGGCTTTAGTCTTACTGTTG 58.614 43.478 0.00 0.00 0.00 3.33
543 544 4.141574 TGGTGGCTTTAGTCTTACTGTTGT 60.142 41.667 0.00 0.00 0.00 3.32
544 545 5.070714 TGGTGGCTTTAGTCTTACTGTTGTA 59.929 40.000 0.00 0.00 0.00 2.41
545 546 6.171213 GGTGGCTTTAGTCTTACTGTTGTAT 58.829 40.000 0.00 0.00 0.00 2.29
546 547 6.092259 GGTGGCTTTAGTCTTACTGTTGTATG 59.908 42.308 0.00 0.00 0.00 2.39
547 548 6.872020 GTGGCTTTAGTCTTACTGTTGTATGA 59.128 38.462 0.00 0.00 32.61 2.15
548 549 6.872020 TGGCTTTAGTCTTACTGTTGTATGAC 59.128 38.462 11.70 11.70 45.97 3.06
557 558 8.709646 GTCTTACTGTTGTATGACTTTGTAAGG 58.290 37.037 0.00 0.00 44.06 2.69
558 559 8.426489 TCTTACTGTTGTATGACTTTGTAAGGT 58.574 33.333 0.00 0.00 37.36 3.50
559 560 8.597662 TTACTGTTGTATGACTTTGTAAGGTC 57.402 34.615 0.44 0.44 0.00 3.85
560 561 6.827727 ACTGTTGTATGACTTTGTAAGGTCT 58.172 36.000 8.11 0.00 34.01 3.85
561 562 7.280356 ACTGTTGTATGACTTTGTAAGGTCTT 58.720 34.615 8.11 4.91 34.01 3.01
562 563 7.226720 ACTGTTGTATGACTTTGTAAGGTCTTG 59.773 37.037 8.11 0.00 34.01 3.02
563 564 7.051623 TGTTGTATGACTTTGTAAGGTCTTGT 58.948 34.615 8.11 0.00 34.01 3.16
564 565 7.011950 TGTTGTATGACTTTGTAAGGTCTTGTG 59.988 37.037 8.11 0.00 34.01 3.33
565 566 6.822442 TGTATGACTTTGTAAGGTCTTGTGA 58.178 36.000 8.11 0.00 34.01 3.58
568 569 5.984725 TGACTTTGTAAGGTCTTGTGAGAA 58.015 37.500 8.11 0.00 32.66 2.87
571 572 8.208224 TGACTTTGTAAGGTCTTGTGAGAATAA 58.792 33.333 8.11 0.00 32.66 1.40
626 627 2.362077 GGTGTCCATGTGCTCAGTTTTT 59.638 45.455 0.00 0.00 0.00 1.94
756 757 3.695606 GACCAGGCGGCAGAGACA 61.696 66.667 13.08 0.00 34.57 3.41
773 775 2.240160 AGACACCCTAGACGATCAGACT 59.760 50.000 0.00 0.00 0.00 3.24
786 788 2.812358 TCAGACTATTGCACACGTGT 57.188 45.000 17.22 17.22 0.00 4.49
804 806 0.537371 GTCTTGTGGGACCCAACAGG 60.537 60.000 16.98 15.66 43.78 4.00
964 983 1.903877 GAAGCTAGCTGTGGAGGGCA 61.904 60.000 20.16 0.00 0.00 5.36
968 987 1.616327 TAGCTGTGGAGGGCATGGT 60.616 57.895 0.00 0.00 0.00 3.55
986 1005 1.075536 GGTGGTGTTCAGATCCCCTTT 59.924 52.381 0.00 0.00 0.00 3.11
1048 1068 3.537874 GGATACAGAGCCGGGCGT 61.538 66.667 14.39 8.36 0.00 5.68
1077 1097 1.112916 TGCCTGTCTTCGTCTGTCCA 61.113 55.000 0.00 0.00 0.00 4.02
1109 1129 0.958876 GGCGTTGATCGGAGGGTTTT 60.959 55.000 0.00 0.00 40.26 2.43
1181 1202 2.375146 GGTAAGAATCGGGGCAATTGT 58.625 47.619 7.40 0.00 0.00 2.71
1184 1205 3.366052 AAGAATCGGGGCAATTGTACT 57.634 42.857 7.40 0.00 0.00 2.73
1220 1242 3.511146 GGATCTTTGAGCAATGGGTTGAA 59.489 43.478 0.00 0.00 37.53 2.69
1373 1395 0.811915 CGAGCTCCGGAAGAAGAGAA 59.188 55.000 5.23 0.00 33.91 2.87
1473 1495 6.186957 AGATCAAGCACAAATACCAATACCA 58.813 36.000 0.00 0.00 0.00 3.25
1518 1541 5.347620 TTGTAGGTATGGTAATCGCACTT 57.652 39.130 0.00 0.00 0.00 3.16
1614 1637 8.706322 AATTCACCTAGTTTAAATGTTGGTCT 57.294 30.769 0.00 0.00 0.00 3.85
1705 1802 8.791675 AGAAGAAATGAGGAATTCAGAAACTTC 58.208 33.333 7.93 11.74 39.68 3.01
1730 1827 6.564125 CGAGAAGAAGTGACCAACATGTAAAC 60.564 42.308 0.00 0.00 0.00 2.01
1826 1944 2.378038 TCTGTATGGGCCAAATTCAGC 58.622 47.619 11.89 0.00 0.00 4.26
1872 1991 3.706086 ACTAATGGGCCAATTGATCCAAC 59.294 43.478 16.25 5.38 32.56 3.77
1898 2017 1.631405 CATTTGGGGGTTCTCTTGCA 58.369 50.000 0.00 0.00 0.00 4.08
1955 2076 5.682862 GGCAGTAAATCATAATGCTGAAACG 59.317 40.000 7.67 0.00 38.42 3.60
1986 2107 8.686334 GTGGAAGCTAATTGAATTATTCCAGAA 58.314 33.333 23.38 8.20 41.20 3.02
1992 2113 9.651913 GCTAATTGAATTATTCCAGAACCAAAA 57.348 29.630 2.22 0.00 0.00 2.44
2109 2233 3.229293 TGTCATGGAAAATGTGCCTCAA 58.771 40.909 0.00 0.00 0.00 3.02
2149 2273 5.012975 ACACCTGGTGCCAAAATTAATGAAT 59.987 36.000 26.20 0.00 36.98 2.57
2215 2340 4.914177 AAATGAAGGGTGGAAAATGCAT 57.086 36.364 0.00 0.00 0.00 3.96
2258 2383 3.998672 GAACCCAGGACCGCGTGA 61.999 66.667 4.92 0.00 31.73 4.35
2288 2413 0.037017 TTTAGGGCTGCGCTGGTAAA 59.963 50.000 27.01 17.14 0.00 2.01
2339 2464 7.746703 ACATGGGTAGGGAAGAAAAGTATATC 58.253 38.462 0.00 0.00 0.00 1.63
2393 2518 3.972107 ACGCGTGAGAGTGGTTTTA 57.028 47.368 12.93 0.00 44.38 1.52
2398 2523 3.362693 CGCGTGAGAGTGGTTTTACTTTC 60.363 47.826 0.00 0.00 33.66 2.62
2549 2674 5.105392 GGAAGAAATGATATGTTTGGGCACA 60.105 40.000 0.00 0.00 0.00 4.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.238646 ACCTGGACTGACACTGTTTTCA 59.761 45.455 0.00 0.00 0.00 2.69
20 21 2.919228 ACCTGGACTGACACTGTTTTC 58.081 47.619 0.00 0.00 0.00 2.29
21 22 3.366052 AACCTGGACTGACACTGTTTT 57.634 42.857 0.00 0.00 0.00 2.43
22 23 3.454812 ACTAACCTGGACTGACACTGTTT 59.545 43.478 0.00 0.00 0.00 2.83
23 24 3.039011 ACTAACCTGGACTGACACTGTT 58.961 45.455 0.00 0.00 0.00 3.16
24 25 2.679082 ACTAACCTGGACTGACACTGT 58.321 47.619 0.00 0.00 0.00 3.55
25 26 3.555168 GGAACTAACCTGGACTGACACTG 60.555 52.174 0.00 0.00 0.00 3.66
26 27 2.633481 GGAACTAACCTGGACTGACACT 59.367 50.000 0.00 0.00 0.00 3.55
27 28 2.367567 TGGAACTAACCTGGACTGACAC 59.632 50.000 0.00 0.00 0.00 3.67
28 29 2.684943 TGGAACTAACCTGGACTGACA 58.315 47.619 0.00 0.00 0.00 3.58
29 30 3.983044 ATGGAACTAACCTGGACTGAC 57.017 47.619 0.00 0.00 0.00 3.51
30 31 3.907474 TGAATGGAACTAACCTGGACTGA 59.093 43.478 0.00 0.00 0.00 3.41
31 32 4.286297 TGAATGGAACTAACCTGGACTG 57.714 45.455 0.00 0.00 0.00 3.51
32 33 4.993705 TTGAATGGAACTAACCTGGACT 57.006 40.909 0.00 0.00 0.00 3.85
33 34 7.696992 TTATTTGAATGGAACTAACCTGGAC 57.303 36.000 0.00 0.00 0.00 4.02
34 35 7.147915 GCATTATTTGAATGGAACTAACCTGGA 60.148 37.037 0.00 0.00 0.00 3.86
35 36 6.980397 GCATTATTTGAATGGAACTAACCTGG 59.020 38.462 0.00 0.00 0.00 4.45
36 37 7.546358 TGCATTATTTGAATGGAACTAACCTG 58.454 34.615 0.00 0.00 0.00 4.00
37 38 7.716799 TGCATTATTTGAATGGAACTAACCT 57.283 32.000 0.00 0.00 0.00 3.50
38 39 8.034804 ACTTGCATTATTTGAATGGAACTAACC 58.965 33.333 0.72 0.00 33.92 2.85
39 40 8.986477 ACTTGCATTATTTGAATGGAACTAAC 57.014 30.769 0.72 0.00 33.92 2.34
42 43 9.023962 TCTAACTTGCATTATTTGAATGGAACT 57.976 29.630 0.72 0.00 33.92 3.01
43 44 9.294030 CTCTAACTTGCATTATTTGAATGGAAC 57.706 33.333 0.72 0.00 33.92 3.62
44 45 9.023962 ACTCTAACTTGCATTATTTGAATGGAA 57.976 29.630 4.50 4.50 35.97 3.53
45 46 8.579850 ACTCTAACTTGCATTATTTGAATGGA 57.420 30.769 0.00 0.00 0.00 3.41
46 47 7.917505 GGACTCTAACTTGCATTATTTGAATGG 59.082 37.037 0.00 0.00 0.00 3.16
47 48 8.461222 TGGACTCTAACTTGCATTATTTGAATG 58.539 33.333 0.00 0.00 0.00 2.67
48 49 8.579850 TGGACTCTAACTTGCATTATTTGAAT 57.420 30.769 0.00 0.00 0.00 2.57
49 50 7.994425 TGGACTCTAACTTGCATTATTTGAA 57.006 32.000 0.00 0.00 0.00 2.69
50 51 7.994425 TTGGACTCTAACTTGCATTATTTGA 57.006 32.000 0.00 0.00 0.00 2.69
51 52 8.915654 GTTTTGGACTCTAACTTGCATTATTTG 58.084 33.333 0.00 0.00 0.00 2.32
52 53 8.637986 TGTTTTGGACTCTAACTTGCATTATTT 58.362 29.630 0.00 0.00 0.00 1.40
53 54 8.177119 TGTTTTGGACTCTAACTTGCATTATT 57.823 30.769 0.00 0.00 0.00 1.40
54 55 7.759489 TGTTTTGGACTCTAACTTGCATTAT 57.241 32.000 0.00 0.00 0.00 1.28
55 56 7.255451 CCTTGTTTTGGACTCTAACTTGCATTA 60.255 37.037 0.00 0.00 0.00 1.90
56 57 6.461509 CCTTGTTTTGGACTCTAACTTGCATT 60.462 38.462 0.00 0.00 0.00 3.56
57 58 5.010012 CCTTGTTTTGGACTCTAACTTGCAT 59.990 40.000 0.00 0.00 0.00 3.96
58 59 4.338118 CCTTGTTTTGGACTCTAACTTGCA 59.662 41.667 0.00 0.00 0.00 4.08
59 60 4.261614 CCCTTGTTTTGGACTCTAACTTGC 60.262 45.833 0.00 0.00 0.00 4.01
60 61 5.130350 TCCCTTGTTTTGGACTCTAACTTG 58.870 41.667 0.00 0.00 0.00 3.16
61 62 5.382664 TCCCTTGTTTTGGACTCTAACTT 57.617 39.130 0.00 0.00 0.00 2.66
62 63 5.382664 TTCCCTTGTTTTGGACTCTAACT 57.617 39.130 0.00 0.00 0.00 2.24
63 64 6.459670 TTTTCCCTTGTTTTGGACTCTAAC 57.540 37.500 0.00 0.00 0.00 2.34
64 65 6.666113 ACTTTTTCCCTTGTTTTGGACTCTAA 59.334 34.615 0.00 0.00 0.00 2.10
65 66 6.096282 CACTTTTTCCCTTGTTTTGGACTCTA 59.904 38.462 0.00 0.00 0.00 2.43
66 67 5.023452 ACTTTTTCCCTTGTTTTGGACTCT 58.977 37.500 0.00 0.00 0.00 3.24
67 68 5.109210 CACTTTTTCCCTTGTTTTGGACTC 58.891 41.667 0.00 0.00 0.00 3.36
68 69 4.530553 ACACTTTTTCCCTTGTTTTGGACT 59.469 37.500 0.00 0.00 0.00 3.85
69 70 4.827692 ACACTTTTTCCCTTGTTTTGGAC 58.172 39.130 0.00 0.00 0.00 4.02
70 71 5.491323 AACACTTTTTCCCTTGTTTTGGA 57.509 34.783 0.00 0.00 0.00 3.53
71 72 5.106357 CCAAACACTTTTTCCCTTGTTTTGG 60.106 40.000 0.00 0.00 39.56 3.28
72 73 5.703130 TCCAAACACTTTTTCCCTTGTTTTG 59.297 36.000 0.00 0.00 39.56 2.44
73 74 5.870706 TCCAAACACTTTTTCCCTTGTTTT 58.129 33.333 0.00 0.00 39.56 2.43
74 75 5.491323 TCCAAACACTTTTTCCCTTGTTT 57.509 34.783 0.00 0.00 41.69 2.83
75 76 5.491323 TTCCAAACACTTTTTCCCTTGTT 57.509 34.783 0.00 0.00 33.59 2.83
76 77 5.491323 TTTCCAAACACTTTTTCCCTTGT 57.509 34.783 0.00 0.00 0.00 3.16
77 78 5.937540 ACTTTTCCAAACACTTTTTCCCTTG 59.062 36.000 0.00 0.00 0.00 3.61
78 79 6.121776 ACTTTTCCAAACACTTTTTCCCTT 57.878 33.333 0.00 0.00 0.00 3.95
79 80 5.755409 ACTTTTCCAAACACTTTTTCCCT 57.245 34.783 0.00 0.00 0.00 4.20
80 81 6.869695 TCTACTTTTCCAAACACTTTTTCCC 58.130 36.000 0.00 0.00 0.00 3.97
81 82 9.459640 GTATCTACTTTTCCAAACACTTTTTCC 57.540 33.333 0.00 0.00 0.00 3.13
82 83 9.166126 CGTATCTACTTTTCCAAACACTTTTTC 57.834 33.333 0.00 0.00 0.00 2.29
83 84 8.895737 TCGTATCTACTTTTCCAAACACTTTTT 58.104 29.630 0.00 0.00 0.00 1.94
84 85 8.441312 TCGTATCTACTTTTCCAAACACTTTT 57.559 30.769 0.00 0.00 0.00 2.27
85 86 7.172703 CCTCGTATCTACTTTTCCAAACACTTT 59.827 37.037 0.00 0.00 0.00 2.66
86 87 6.649557 CCTCGTATCTACTTTTCCAAACACTT 59.350 38.462 0.00 0.00 0.00 3.16
87 88 6.164176 CCTCGTATCTACTTTTCCAAACACT 58.836 40.000 0.00 0.00 0.00 3.55
88 89 5.350640 CCCTCGTATCTACTTTTCCAAACAC 59.649 44.000 0.00 0.00 0.00 3.32
89 90 5.246656 TCCCTCGTATCTACTTTTCCAAACA 59.753 40.000 0.00 0.00 0.00 2.83
90 91 5.727434 TCCCTCGTATCTACTTTTCCAAAC 58.273 41.667 0.00 0.00 0.00 2.93
91 92 5.718130 TCTCCCTCGTATCTACTTTTCCAAA 59.282 40.000 0.00 0.00 0.00 3.28
92 93 5.126707 GTCTCCCTCGTATCTACTTTTCCAA 59.873 44.000 0.00 0.00 0.00 3.53
93 94 4.643784 GTCTCCCTCGTATCTACTTTTCCA 59.356 45.833 0.00 0.00 0.00 3.53
94 95 4.261114 CGTCTCCCTCGTATCTACTTTTCC 60.261 50.000 0.00 0.00 0.00 3.13
95 96 4.335037 ACGTCTCCCTCGTATCTACTTTTC 59.665 45.833 0.00 0.00 39.78 2.29
96 97 4.268359 ACGTCTCCCTCGTATCTACTTTT 58.732 43.478 0.00 0.00 39.78 2.27
97 98 3.883669 ACGTCTCCCTCGTATCTACTTT 58.116 45.455 0.00 0.00 39.78 2.66
98 99 3.557228 ACGTCTCCCTCGTATCTACTT 57.443 47.619 0.00 0.00 39.78 2.24
99 100 4.888326 ATACGTCTCCCTCGTATCTACT 57.112 45.455 0.00 0.00 46.77 2.57
105 106 2.171237 TCCTTGATACGTCTCCCTCGTA 59.829 50.000 0.00 0.00 45.41 3.43
106 107 1.064906 TCCTTGATACGTCTCCCTCGT 60.065 52.381 0.00 0.00 43.86 4.18
107 108 1.604755 CTCCTTGATACGTCTCCCTCG 59.395 57.143 0.00 0.00 0.00 4.63
108 109 1.338655 GCTCCTTGATACGTCTCCCTC 59.661 57.143 0.00 0.00 0.00 4.30
109 110 1.404843 GCTCCTTGATACGTCTCCCT 58.595 55.000 0.00 0.00 0.00 4.20
110 111 0.030908 CGCTCCTTGATACGTCTCCC 59.969 60.000 0.00 0.00 0.00 4.30
111 112 0.030908 CCGCTCCTTGATACGTCTCC 59.969 60.000 0.00 0.00 0.00 3.71
112 113 0.595310 GCCGCTCCTTGATACGTCTC 60.595 60.000 0.00 0.00 0.00 3.36
113 114 1.320344 TGCCGCTCCTTGATACGTCT 61.320 55.000 0.00 0.00 0.00 4.18
114 115 0.249489 ATGCCGCTCCTTGATACGTC 60.249 55.000 0.00 0.00 0.00 4.34
115 116 0.530650 CATGCCGCTCCTTGATACGT 60.531 55.000 0.00 0.00 0.00 3.57
116 117 1.224069 CCATGCCGCTCCTTGATACG 61.224 60.000 0.00 0.00 0.00 3.06
117 118 1.510480 GCCATGCCGCTCCTTGATAC 61.510 60.000 0.00 0.00 0.00 2.24
118 119 1.227943 GCCATGCCGCTCCTTGATA 60.228 57.895 0.00 0.00 0.00 2.15
119 120 2.517875 GCCATGCCGCTCCTTGAT 60.518 61.111 0.00 0.00 0.00 2.57
120 121 3.348554 ATGCCATGCCGCTCCTTGA 62.349 57.895 0.00 0.00 0.00 3.02
121 122 2.831742 ATGCCATGCCGCTCCTTG 60.832 61.111 0.00 0.00 0.00 3.61
122 123 2.517875 GATGCCATGCCGCTCCTT 60.518 61.111 0.00 0.00 0.00 3.36
123 124 3.486685 AGATGCCATGCCGCTCCT 61.487 61.111 0.00 0.00 0.00 3.69
124 125 3.285215 CAGATGCCATGCCGCTCC 61.285 66.667 0.00 0.00 0.00 4.70
125 126 3.285215 CCAGATGCCATGCCGCTC 61.285 66.667 0.00 0.00 0.00 5.03
128 129 3.896133 GTGCCAGATGCCATGCCG 61.896 66.667 0.00 0.00 40.16 5.69
129 130 3.896133 CGTGCCAGATGCCATGCC 61.896 66.667 0.00 0.00 40.16 4.40
130 131 3.117175 GACGTGCCAGATGCCATGC 62.117 63.158 0.00 0.00 40.16 4.06
131 132 2.816360 CGACGTGCCAGATGCCATG 61.816 63.158 0.00 0.00 40.16 3.66
132 133 2.512286 CGACGTGCCAGATGCCAT 60.512 61.111 0.00 0.00 40.16 4.40
133 134 3.690280 TCGACGTGCCAGATGCCA 61.690 61.111 0.00 0.00 40.16 4.92
134 135 3.188786 GTCGACGTGCCAGATGCC 61.189 66.667 0.00 0.00 40.16 4.40
135 136 1.756375 GATGTCGACGTGCCAGATGC 61.756 60.000 16.54 0.00 41.77 3.91
136 137 1.474648 CGATGTCGACGTGCCAGATG 61.475 60.000 16.54 0.00 43.02 2.90
137 138 1.226688 CGATGTCGACGTGCCAGAT 60.227 57.895 16.54 0.00 43.02 2.90
138 139 2.178273 CGATGTCGACGTGCCAGA 59.822 61.111 16.54 0.00 43.02 3.86
139 140 2.880879 CCGATGTCGACGTGCCAG 60.881 66.667 16.54 3.73 43.02 4.85
146 147 3.753070 GAGACCCGCCGATGTCGAC 62.753 68.421 9.11 9.11 43.02 4.20
147 148 3.515286 GAGACCCGCCGATGTCGA 61.515 66.667 3.62 0.00 43.02 4.20
148 149 3.758088 CTGAGACCCGCCGATGTCG 62.758 68.421 0.00 0.00 36.61 4.35
149 150 2.105128 CTGAGACCCGCCGATGTC 59.895 66.667 0.00 0.00 0.00 3.06
150 151 4.148825 GCTGAGACCCGCCGATGT 62.149 66.667 0.00 0.00 0.00 3.06
157 158 3.664025 TTCATGCCGCTGAGACCCG 62.664 63.158 0.00 0.00 0.00 5.28
158 159 1.817099 CTTCATGCCGCTGAGACCC 60.817 63.158 0.00 0.00 0.00 4.46
159 160 2.467826 GCTTCATGCCGCTGAGACC 61.468 63.158 0.00 0.00 35.15 3.85
160 161 1.094073 ATGCTTCATGCCGCTGAGAC 61.094 55.000 7.42 0.00 42.00 3.36
161 162 0.812811 GATGCTTCATGCCGCTGAGA 60.813 55.000 7.42 0.00 42.00 3.27
162 163 1.647629 GATGCTTCATGCCGCTGAG 59.352 57.895 7.42 0.00 42.00 3.35
163 164 2.175621 CGATGCTTCATGCCGCTGA 61.176 57.895 7.42 0.00 42.00 4.26
164 165 2.326897 CGATGCTTCATGCCGCTG 59.673 61.111 7.42 0.00 42.00 5.18
165 166 2.898840 CCGATGCTTCATGCCGCT 60.899 61.111 7.42 0.00 42.00 5.52
166 167 3.957535 CCCGATGCTTCATGCCGC 61.958 66.667 0.08 0.00 42.00 6.53
167 168 3.282157 CCCCGATGCTTCATGCCG 61.282 66.667 0.08 0.00 42.00 5.69
168 169 2.124151 ACCCCGATGCTTCATGCC 60.124 61.111 0.08 0.00 42.00 4.40
169 170 1.153086 AGACCCCGATGCTTCATGC 60.153 57.895 0.08 0.00 43.25 4.06
170 171 0.877649 CGAGACCCCGATGCTTCATG 60.878 60.000 0.08 0.00 0.00 3.07
171 172 1.443407 CGAGACCCCGATGCTTCAT 59.557 57.895 0.08 0.00 0.00 2.57
172 173 2.892640 CGAGACCCCGATGCTTCA 59.107 61.111 0.08 0.00 0.00 3.02
173 174 2.586357 GCGAGACCCCGATGCTTC 60.586 66.667 0.00 0.00 0.00 3.86
174 175 3.077556 AGCGAGACCCCGATGCTT 61.078 61.111 0.00 0.00 30.27 3.91
175 176 3.842923 CAGCGAGACCCCGATGCT 61.843 66.667 0.00 0.00 39.09 3.79
176 177 4.899239 CCAGCGAGACCCCGATGC 62.899 72.222 0.00 0.00 43.65 3.91
177 178 3.461773 ACCAGCGAGACCCCGATG 61.462 66.667 0.00 0.00 44.48 3.84
178 179 3.461773 CACCAGCGAGACCCCGAT 61.462 66.667 0.00 0.00 0.00 4.18
189 190 3.434319 CATCACACGCCCACCAGC 61.434 66.667 0.00 0.00 0.00 4.85
190 191 1.078214 ATCATCACACGCCCACCAG 60.078 57.895 0.00 0.00 0.00 4.00
191 192 1.377072 CATCATCACACGCCCACCA 60.377 57.895 0.00 0.00 0.00 4.17
192 193 2.114670 CCATCATCACACGCCCACC 61.115 63.158 0.00 0.00 0.00 4.61
193 194 1.078497 TCCATCATCACACGCCCAC 60.078 57.895 0.00 0.00 0.00 4.61
194 195 1.078497 GTCCATCATCACACGCCCA 60.078 57.895 0.00 0.00 0.00 5.36
195 196 2.173669 CGTCCATCATCACACGCCC 61.174 63.158 0.00 0.00 0.00 6.13
196 197 1.148157 CTCGTCCATCATCACACGCC 61.148 60.000 0.00 0.00 32.21 5.68
197 198 0.458543 ACTCGTCCATCATCACACGC 60.459 55.000 0.00 0.00 32.21 5.34
198 199 1.271876 CACTCGTCCATCATCACACG 58.728 55.000 0.00 0.00 0.00 4.49
199 200 2.370281 ACACTCGTCCATCATCACAC 57.630 50.000 0.00 0.00 0.00 3.82
200 201 2.427095 CCTACACTCGTCCATCATCACA 59.573 50.000 0.00 0.00 0.00 3.58
201 202 2.688446 TCCTACACTCGTCCATCATCAC 59.312 50.000 0.00 0.00 0.00 3.06
202 203 3.012934 TCCTACACTCGTCCATCATCA 57.987 47.619 0.00 0.00 0.00 3.07
203 204 3.570125 TCATCCTACACTCGTCCATCATC 59.430 47.826 0.00 0.00 0.00 2.92
204 205 3.566351 TCATCCTACACTCGTCCATCAT 58.434 45.455 0.00 0.00 0.00 2.45
205 206 3.012934 TCATCCTACACTCGTCCATCA 57.987 47.619 0.00 0.00 0.00 3.07
206 207 3.305676 CCATCATCCTACACTCGTCCATC 60.306 52.174 0.00 0.00 0.00 3.51
207 208 2.630098 CCATCATCCTACACTCGTCCAT 59.370 50.000 0.00 0.00 0.00 3.41
208 209 2.031870 CCATCATCCTACACTCGTCCA 58.968 52.381 0.00 0.00 0.00 4.02
209 210 1.269831 GCCATCATCCTACACTCGTCC 60.270 57.143 0.00 0.00 0.00 4.79
210 211 1.600663 CGCCATCATCCTACACTCGTC 60.601 57.143 0.00 0.00 0.00 4.20
211 212 0.385751 CGCCATCATCCTACACTCGT 59.614 55.000 0.00 0.00 0.00 4.18
212 213 0.385751 ACGCCATCATCCTACACTCG 59.614 55.000 0.00 0.00 0.00 4.18
213 214 2.205074 CAACGCCATCATCCTACACTC 58.795 52.381 0.00 0.00 0.00 3.51
214 215 1.555075 ACAACGCCATCATCCTACACT 59.445 47.619 0.00 0.00 0.00 3.55
215 216 1.933853 GACAACGCCATCATCCTACAC 59.066 52.381 0.00 0.00 0.00 2.90
216 217 1.831106 AGACAACGCCATCATCCTACA 59.169 47.619 0.00 0.00 0.00 2.74
217 218 2.205074 CAGACAACGCCATCATCCTAC 58.795 52.381 0.00 0.00 0.00 3.18
218 219 1.138859 CCAGACAACGCCATCATCCTA 59.861 52.381 0.00 0.00 0.00 2.94
219 220 0.107508 CCAGACAACGCCATCATCCT 60.108 55.000 0.00 0.00 0.00 3.24
220 221 1.718757 GCCAGACAACGCCATCATCC 61.719 60.000 0.00 0.00 0.00 3.51
221 222 1.723870 GCCAGACAACGCCATCATC 59.276 57.895 0.00 0.00 0.00 2.92
222 223 2.108514 CGCCAGACAACGCCATCAT 61.109 57.895 0.00 0.00 0.00 2.45
223 224 2.741985 CGCCAGACAACGCCATCA 60.742 61.111 0.00 0.00 0.00 3.07
224 225 2.740714 GACGCCAGACAACGCCATC 61.741 63.158 0.00 0.00 0.00 3.51
225 226 2.742372 GACGCCAGACAACGCCAT 60.742 61.111 0.00 0.00 0.00 4.40
228 229 4.059459 CACGACGCCAGACAACGC 62.059 66.667 0.00 0.00 0.00 4.84
229 230 3.403057 CCACGACGCCAGACAACG 61.403 66.667 0.00 0.00 0.00 4.10
230 231 2.279918 ACCACGACGCCAGACAAC 60.280 61.111 0.00 0.00 0.00 3.32
231 232 2.279851 CACCACGACGCCAGACAA 60.280 61.111 0.00 0.00 0.00 3.18
232 233 4.293648 CCACCACGACGCCAGACA 62.294 66.667 0.00 0.00 0.00 3.41
239 240 2.202743 ATCGATGCCACCACGACG 60.203 61.111 0.00 0.00 38.79 5.12
240 241 1.153647 TCATCGATGCCACCACGAC 60.154 57.895 20.81 0.00 38.79 4.34
241 242 1.153647 GTCATCGATGCCACCACGA 60.154 57.895 20.81 0.00 40.18 4.35
242 243 1.423721 CTGTCATCGATGCCACCACG 61.424 60.000 20.81 0.00 0.00 4.94
243 244 1.709147 GCTGTCATCGATGCCACCAC 61.709 60.000 20.81 13.23 0.00 4.16
244 245 1.450134 GCTGTCATCGATGCCACCA 60.450 57.895 20.81 12.42 0.00 4.17
245 246 0.104855 TAGCTGTCATCGATGCCACC 59.895 55.000 20.81 7.10 0.00 4.61
246 247 1.067669 TCTAGCTGTCATCGATGCCAC 59.932 52.381 20.81 14.67 0.00 5.01
247 248 1.067669 GTCTAGCTGTCATCGATGCCA 59.932 52.381 20.81 14.99 0.00 4.92
248 249 1.604185 GGTCTAGCTGTCATCGATGCC 60.604 57.143 20.81 10.37 0.00 4.40
249 250 1.777101 GGTCTAGCTGTCATCGATGC 58.223 55.000 20.81 15.45 0.00 3.91
250 251 1.335415 CCGGTCTAGCTGTCATCGATG 60.335 57.143 19.61 19.61 0.00 3.84
251 252 0.955178 CCGGTCTAGCTGTCATCGAT 59.045 55.000 0.00 0.00 0.00 3.59
252 253 1.101635 CCCGGTCTAGCTGTCATCGA 61.102 60.000 0.00 0.00 0.00 3.59
253 254 1.360551 CCCGGTCTAGCTGTCATCG 59.639 63.158 0.00 0.00 0.00 3.84
254 255 1.068250 GCCCGGTCTAGCTGTCATC 59.932 63.158 0.00 0.00 0.00 2.92
255 256 1.264749 TTGCCCGGTCTAGCTGTCAT 61.265 55.000 0.00 0.00 0.00 3.06
256 257 1.888436 CTTGCCCGGTCTAGCTGTCA 61.888 60.000 0.00 0.00 0.00 3.58
257 258 1.153549 CTTGCCCGGTCTAGCTGTC 60.154 63.158 0.00 0.00 0.00 3.51
258 259 2.660064 CCTTGCCCGGTCTAGCTGT 61.660 63.158 0.00 0.00 0.00 4.40
259 260 1.327690 TACCTTGCCCGGTCTAGCTG 61.328 60.000 0.00 0.00 38.49 4.24
260 261 1.001248 TACCTTGCCCGGTCTAGCT 59.999 57.895 0.00 0.00 38.49 3.32
261 262 1.041447 TCTACCTTGCCCGGTCTAGC 61.041 60.000 0.00 0.00 38.49 3.42
262 263 1.341531 CATCTACCTTGCCCGGTCTAG 59.658 57.143 0.00 0.00 38.49 2.43
263 264 1.342674 ACATCTACCTTGCCCGGTCTA 60.343 52.381 0.00 0.00 38.49 2.59
264 265 0.617820 ACATCTACCTTGCCCGGTCT 60.618 55.000 0.00 0.00 38.49 3.85
265 266 1.068741 CTACATCTACCTTGCCCGGTC 59.931 57.143 0.00 0.00 38.49 4.79
266 267 1.120530 CTACATCTACCTTGCCCGGT 58.879 55.000 0.00 0.00 41.10 5.28
267 268 0.249911 GCTACATCTACCTTGCCCGG 60.250 60.000 0.00 0.00 0.00 5.73
268 269 0.464036 TGCTACATCTACCTTGCCCG 59.536 55.000 0.00 0.00 0.00 6.13
269 270 1.486726 ACTGCTACATCTACCTTGCCC 59.513 52.381 0.00 0.00 0.00 5.36
270 271 2.990066 ACTGCTACATCTACCTTGCC 57.010 50.000 0.00 0.00 0.00 4.52
271 272 4.363999 CTGTACTGCTACATCTACCTTGC 58.636 47.826 0.00 0.00 32.21 4.01
272 273 4.142160 TGCTGTACTGCTACATCTACCTTG 60.142 45.833 23.07 0.00 32.21 3.61
273 274 4.023980 TGCTGTACTGCTACATCTACCTT 58.976 43.478 23.07 0.00 32.21 3.50
274 275 3.381908 GTGCTGTACTGCTACATCTACCT 59.618 47.826 23.07 0.00 32.21 3.08
275 276 3.381908 AGTGCTGTACTGCTACATCTACC 59.618 47.826 23.07 3.17 38.49 3.18
276 277 4.640789 AGTGCTGTACTGCTACATCTAC 57.359 45.455 23.07 12.30 38.49 2.59
277 278 6.602009 TCTTTAGTGCTGTACTGCTACATCTA 59.398 38.462 23.07 14.48 40.65 1.98
278 279 5.419155 TCTTTAGTGCTGTACTGCTACATCT 59.581 40.000 23.07 15.25 40.65 2.90
279 280 5.651530 TCTTTAGTGCTGTACTGCTACATC 58.348 41.667 23.07 10.08 40.65 3.06
280 281 5.661056 TCTTTAGTGCTGTACTGCTACAT 57.339 39.130 23.07 10.42 40.65 2.29
281 282 5.185056 TCATCTTTAGTGCTGTACTGCTACA 59.815 40.000 23.07 7.32 40.65 2.74
282 283 5.651530 TCATCTTTAGTGCTGTACTGCTAC 58.348 41.667 23.07 18.41 40.65 3.58
283 284 5.914898 TCATCTTTAGTGCTGTACTGCTA 57.085 39.130 23.07 7.77 40.65 3.49
284 285 4.808414 TCATCTTTAGTGCTGTACTGCT 57.192 40.909 23.07 8.71 40.65 4.24
285 286 6.253746 CAATTCATCTTTAGTGCTGTACTGC 58.746 40.000 17.07 17.07 40.65 4.40
286 287 6.372659 ACCAATTCATCTTTAGTGCTGTACTG 59.627 38.462 8.75 0.00 40.65 2.74
287 288 6.372659 CACCAATTCATCTTTAGTGCTGTACT 59.627 38.462 3.41 3.41 43.56 2.73
288 289 6.403636 CCACCAATTCATCTTTAGTGCTGTAC 60.404 42.308 0.00 0.00 0.00 2.90
289 290 5.647658 CCACCAATTCATCTTTAGTGCTGTA 59.352 40.000 0.00 0.00 0.00 2.74
290 291 4.460382 CCACCAATTCATCTTTAGTGCTGT 59.540 41.667 0.00 0.00 0.00 4.40
291 292 4.676196 GCCACCAATTCATCTTTAGTGCTG 60.676 45.833 0.00 0.00 0.00 4.41
292 293 3.445096 GCCACCAATTCATCTTTAGTGCT 59.555 43.478 0.00 0.00 0.00 4.40
293 294 3.193267 TGCCACCAATTCATCTTTAGTGC 59.807 43.478 0.00 0.00 0.00 4.40
294 295 4.142315 CCTGCCACCAATTCATCTTTAGTG 60.142 45.833 0.00 0.00 0.00 2.74
295 296 4.019174 CCTGCCACCAATTCATCTTTAGT 58.981 43.478 0.00 0.00 0.00 2.24
296 297 4.019174 ACCTGCCACCAATTCATCTTTAG 58.981 43.478 0.00 0.00 0.00 1.85
297 298 3.763360 CACCTGCCACCAATTCATCTTTA 59.237 43.478 0.00 0.00 0.00 1.85
298 299 2.564062 CACCTGCCACCAATTCATCTTT 59.436 45.455 0.00 0.00 0.00 2.52
299 300 2.173519 CACCTGCCACCAATTCATCTT 58.826 47.619 0.00 0.00 0.00 2.40
300 301 1.617804 CCACCTGCCACCAATTCATCT 60.618 52.381 0.00 0.00 0.00 2.90
301 302 0.819582 CCACCTGCCACCAATTCATC 59.180 55.000 0.00 0.00 0.00 2.92
302 303 1.259840 GCCACCTGCCACCAATTCAT 61.260 55.000 0.00 0.00 0.00 2.57
303 304 1.907807 GCCACCTGCCACCAATTCA 60.908 57.895 0.00 0.00 0.00 2.57
304 305 1.607467 AGCCACCTGCCACCAATTC 60.607 57.895 0.00 0.00 42.71 2.17
305 306 1.909781 CAGCCACCTGCCACCAATT 60.910 57.895 0.00 0.00 42.71 2.32
306 307 2.283388 CAGCCACCTGCCACCAAT 60.283 61.111 0.00 0.00 42.71 3.16
321 322 1.227380 GGGTATGAGGCTGTCGCAG 60.227 63.158 0.00 2.92 38.10 5.18
322 323 2.900273 GGGTATGAGGCTGTCGCA 59.100 61.111 0.00 0.00 38.10 5.10
323 324 2.279517 CGGGTATGAGGCTGTCGC 60.280 66.667 0.00 0.00 0.00 5.19
324 325 2.417516 CCGGGTATGAGGCTGTCG 59.582 66.667 0.00 0.00 0.00 4.35
330 331 2.738213 GATGCCTGCCGGGTATGAGG 62.738 65.000 2.18 0.00 40.53 3.86
331 332 1.302033 GATGCCTGCCGGGTATGAG 60.302 63.158 2.18 0.00 40.53 2.90
332 333 2.818169 GGATGCCTGCCGGGTATGA 61.818 63.158 2.18 0.00 40.53 2.15
333 334 2.281761 GGATGCCTGCCGGGTATG 60.282 66.667 2.18 0.00 40.53 2.39
334 335 2.448542 AGGATGCCTGCCGGGTAT 60.449 61.111 2.18 0.00 43.15 2.73
335 336 3.479203 CAGGATGCCTGCCGGGTA 61.479 66.667 2.18 0.00 45.13 3.69
349 350 2.743928 GCGCACTCCTCAACCAGG 60.744 66.667 0.30 0.00 45.15 4.45
350 351 3.114616 CGCGCACTCCTCAACCAG 61.115 66.667 8.75 0.00 0.00 4.00
359 360 4.477975 ACTAGTCCGCGCGCACTC 62.478 66.667 32.24 19.18 0.00 3.51
360 361 4.778415 CACTAGTCCGCGCGCACT 62.778 66.667 31.00 31.00 0.00 4.40
366 367 4.814294 GGCACCCACTAGTCCGCG 62.814 72.222 0.00 0.00 0.00 6.46
367 368 3.372554 GAGGCACCCACTAGTCCGC 62.373 68.421 0.00 0.00 0.00 5.54
368 369 1.330655 ATGAGGCACCCACTAGTCCG 61.331 60.000 0.00 0.00 0.00 4.79
369 370 1.413077 GTATGAGGCACCCACTAGTCC 59.587 57.143 0.00 0.00 0.00 3.85
370 371 1.413077 GGTATGAGGCACCCACTAGTC 59.587 57.143 0.00 0.00 0.00 2.59
371 372 1.497161 GGTATGAGGCACCCACTAGT 58.503 55.000 0.00 0.00 0.00 2.57
382 383 2.666190 CGCATGCCGGGTATGAGG 60.666 66.667 26.57 14.23 0.00 3.86
383 384 1.956170 GACGCATGCCGGGTATGAG 60.956 63.158 26.57 24.74 41.66 2.90
384 385 2.108157 GACGCATGCCGGGTATGA 59.892 61.111 26.57 0.00 41.66 2.15
385 386 2.972505 GGACGCATGCCGGGTATG 60.973 66.667 19.42 19.42 41.66 2.39
386 387 3.161450 AGGACGCATGCCGGGTAT 61.161 61.111 13.15 0.00 41.66 2.73
387 388 4.155733 CAGGACGCATGCCGGGTA 62.156 66.667 13.15 0.00 41.66 3.69
389 390 2.658679 TAATCAGGACGCATGCCGGG 62.659 60.000 13.15 0.00 42.52 5.73
390 391 1.224069 CTAATCAGGACGCATGCCGG 61.224 60.000 13.15 0.00 42.52 6.13
391 392 1.224069 CCTAATCAGGACGCATGCCG 61.224 60.000 13.15 10.04 45.91 5.69
392 393 0.106708 TCCTAATCAGGACGCATGCC 59.893 55.000 13.15 0.00 46.58 4.40
393 394 3.686622 TCCTAATCAGGACGCATGC 57.313 52.632 7.91 7.91 46.58 4.06
411 412 4.949121 ACCTAACATCTAAGACCTGAGGT 58.051 43.478 2.41 2.41 39.44 3.85
412 413 6.015010 CCATACCTAACATCTAAGACCTGAGG 60.015 46.154 0.00 0.00 0.00 3.86
413 414 6.517529 GCCATACCTAACATCTAAGACCTGAG 60.518 46.154 0.00 0.00 0.00 3.35
414 415 5.304614 GCCATACCTAACATCTAAGACCTGA 59.695 44.000 0.00 0.00 0.00 3.86
415 416 5.511545 GGCCATACCTAACATCTAAGACCTG 60.512 48.000 0.00 0.00 34.51 4.00
416 417 4.593634 GGCCATACCTAACATCTAAGACCT 59.406 45.833 0.00 0.00 34.51 3.85
417 418 4.560919 CGGCCATACCTAACATCTAAGACC 60.561 50.000 2.24 0.00 35.61 3.85
418 419 4.557205 CGGCCATACCTAACATCTAAGAC 58.443 47.826 2.24 0.00 35.61 3.01
419 420 3.006537 GCGGCCATACCTAACATCTAAGA 59.993 47.826 2.24 0.00 35.61 2.10
420 421 3.326747 GCGGCCATACCTAACATCTAAG 58.673 50.000 2.24 0.00 35.61 2.18
421 422 2.288579 CGCGGCCATACCTAACATCTAA 60.289 50.000 2.24 0.00 35.61 2.10
422 423 1.271379 CGCGGCCATACCTAACATCTA 59.729 52.381 2.24 0.00 35.61 1.98
423 424 0.033504 CGCGGCCATACCTAACATCT 59.966 55.000 2.24 0.00 35.61 2.90
424 425 0.032952 TCGCGGCCATACCTAACATC 59.967 55.000 6.13 0.00 35.61 3.06
425 426 0.033504 CTCGCGGCCATACCTAACAT 59.966 55.000 6.13 0.00 35.61 2.71
426 427 1.440060 CTCGCGGCCATACCTAACA 59.560 57.895 6.13 0.00 35.61 2.41
427 428 1.300697 CCTCGCGGCCATACCTAAC 60.301 63.158 6.13 0.00 35.61 2.34
428 429 0.467844 TACCTCGCGGCCATACCTAA 60.468 55.000 6.13 0.00 35.61 2.69
429 430 0.251474 ATACCTCGCGGCCATACCTA 60.251 55.000 6.13 0.00 35.61 3.08
430 431 1.533273 ATACCTCGCGGCCATACCT 60.533 57.895 6.13 0.00 35.61 3.08
431 432 1.374252 CATACCTCGCGGCCATACC 60.374 63.158 6.13 0.00 0.00 2.73
432 433 0.249741 AACATACCTCGCGGCCATAC 60.250 55.000 6.13 0.00 0.00 2.39
433 434 0.466543 AAACATACCTCGCGGCCATA 59.533 50.000 6.13 0.00 0.00 2.74
434 435 1.095228 CAAACATACCTCGCGGCCAT 61.095 55.000 6.13 0.00 0.00 4.40
435 436 1.743623 CAAACATACCTCGCGGCCA 60.744 57.895 6.13 0.00 0.00 5.36
436 437 2.469516 CCAAACATACCTCGCGGCC 61.470 63.158 6.13 0.00 0.00 6.13
437 438 0.460635 TACCAAACATACCTCGCGGC 60.461 55.000 6.13 0.00 0.00 6.53
438 439 2.234300 ATACCAAACATACCTCGCGG 57.766 50.000 6.13 0.00 0.00 6.46
439 440 3.739300 CCTAATACCAAACATACCTCGCG 59.261 47.826 0.00 0.00 0.00 5.87
440 441 3.497262 GCCTAATACCAAACATACCTCGC 59.503 47.826 0.00 0.00 0.00 5.03
441 442 4.062991 GGCCTAATACCAAACATACCTCG 58.937 47.826 0.00 0.00 0.00 4.63
442 443 5.306114 AGGCCTAATACCAAACATACCTC 57.694 43.478 1.29 0.00 0.00 3.85
443 444 6.042897 GTCTAGGCCTAATACCAAACATACCT 59.957 42.308 14.85 0.00 0.00 3.08
444 445 6.042897 AGTCTAGGCCTAATACCAAACATACC 59.957 42.308 14.85 0.00 0.00 2.73
445 446 7.063934 AGTCTAGGCCTAATACCAAACATAC 57.936 40.000 14.85 0.00 0.00 2.39
446 447 8.967779 ATAGTCTAGGCCTAATACCAAACATA 57.032 34.615 14.85 3.40 0.00 2.29
447 448 7.873699 ATAGTCTAGGCCTAATACCAAACAT 57.126 36.000 14.85 1.31 0.00 2.71
448 449 7.039223 GCTATAGTCTAGGCCTAATACCAAACA 60.039 40.741 14.85 0.00 0.00 2.83
449 450 7.039223 TGCTATAGTCTAGGCCTAATACCAAAC 60.039 40.741 14.85 1.90 0.00 2.93
450 451 7.014449 TGCTATAGTCTAGGCCTAATACCAAA 58.986 38.462 14.85 4.64 0.00 3.28
451 452 6.558498 TGCTATAGTCTAGGCCTAATACCAA 58.442 40.000 14.85 6.94 0.00 3.67
452 453 6.148735 TGCTATAGTCTAGGCCTAATACCA 57.851 41.667 14.85 4.77 0.00 3.25
453 454 6.265876 GGATGCTATAGTCTAGGCCTAATACC 59.734 46.154 14.85 2.87 0.00 2.73
454 455 6.265876 GGGATGCTATAGTCTAGGCCTAATAC 59.734 46.154 14.85 14.64 0.00 1.89
455 456 6.162420 AGGGATGCTATAGTCTAGGCCTAATA 59.838 42.308 14.85 7.77 0.00 0.98
456 457 5.042979 AGGGATGCTATAGTCTAGGCCTAAT 60.043 44.000 14.85 6.93 0.00 1.73
457 458 4.295238 AGGGATGCTATAGTCTAGGCCTAA 59.705 45.833 14.85 0.00 0.00 2.69
458 459 3.859248 AGGGATGCTATAGTCTAGGCCTA 59.141 47.826 13.09 13.09 0.00 3.93
459 460 2.657459 AGGGATGCTATAGTCTAGGCCT 59.343 50.000 11.78 11.78 0.00 5.19
460 461 3.108847 AGGGATGCTATAGTCTAGGCC 57.891 52.381 0.00 0.00 0.00 5.19
461 462 4.090090 TGAAGGGATGCTATAGTCTAGGC 58.910 47.826 0.84 0.00 0.00 3.93
462 463 5.954752 TGATGAAGGGATGCTATAGTCTAGG 59.045 44.000 0.84 0.00 0.00 3.02
463 464 7.178274 AGTTGATGAAGGGATGCTATAGTCTAG 59.822 40.741 0.84 0.00 0.00 2.43
464 465 7.013220 AGTTGATGAAGGGATGCTATAGTCTA 58.987 38.462 0.84 0.00 0.00 2.59
465 466 5.843421 AGTTGATGAAGGGATGCTATAGTCT 59.157 40.000 0.84 0.00 0.00 3.24
466 467 6.107901 AGTTGATGAAGGGATGCTATAGTC 57.892 41.667 0.84 0.00 0.00 2.59
467 468 5.279206 CGAGTTGATGAAGGGATGCTATAGT 60.279 44.000 0.84 0.00 0.00 2.12
468 469 5.047731 TCGAGTTGATGAAGGGATGCTATAG 60.048 44.000 0.00 0.00 0.00 1.31
469 470 4.832823 TCGAGTTGATGAAGGGATGCTATA 59.167 41.667 0.00 0.00 0.00 1.31
470 471 3.643320 TCGAGTTGATGAAGGGATGCTAT 59.357 43.478 0.00 0.00 0.00 2.97
471 472 3.031013 TCGAGTTGATGAAGGGATGCTA 58.969 45.455 0.00 0.00 0.00 3.49
472 473 1.833630 TCGAGTTGATGAAGGGATGCT 59.166 47.619 0.00 0.00 0.00 3.79
473 474 2.315925 TCGAGTTGATGAAGGGATGC 57.684 50.000 0.00 0.00 0.00 3.91
474 475 4.281941 TCCTATCGAGTTGATGAAGGGATG 59.718 45.833 8.72 0.00 37.99 3.51
475 476 4.483950 TCCTATCGAGTTGATGAAGGGAT 58.516 43.478 8.72 0.00 37.99 3.85
476 477 3.891977 CTCCTATCGAGTTGATGAAGGGA 59.108 47.826 8.72 7.35 37.99 4.20
477 478 4.250116 CTCCTATCGAGTTGATGAAGGG 57.750 50.000 8.72 4.15 37.99 3.95
488 489 2.485903 AGTGTCGCTACTCCTATCGAG 58.514 52.381 0.00 0.00 44.95 4.04
489 490 2.612672 CAAGTGTCGCTACTCCTATCGA 59.387 50.000 0.00 0.00 0.00 3.59
490 491 2.355132 ACAAGTGTCGCTACTCCTATCG 59.645 50.000 0.00 0.00 0.00 2.92
491 492 4.106197 CAACAAGTGTCGCTACTCCTATC 58.894 47.826 0.00 0.00 0.00 2.08
492 493 3.676324 GCAACAAGTGTCGCTACTCCTAT 60.676 47.826 0.00 0.00 0.00 2.57
493 494 2.352421 GCAACAAGTGTCGCTACTCCTA 60.352 50.000 0.00 0.00 0.00 2.94
494 495 1.605712 GCAACAAGTGTCGCTACTCCT 60.606 52.381 0.00 0.00 0.00 3.69
495 496 0.790814 GCAACAAGTGTCGCTACTCC 59.209 55.000 0.00 0.00 0.00 3.85
496 497 0.790814 GGCAACAAGTGTCGCTACTC 59.209 55.000 0.00 0.00 0.00 2.59
497 498 0.393077 AGGCAACAAGTGTCGCTACT 59.607 50.000 0.00 0.00 36.74 2.57
498 499 2.074547 TAGGCAACAAGTGTCGCTAC 57.925 50.000 0.00 0.00 36.74 3.58
499 500 4.368315 CATATAGGCAACAAGTGTCGCTA 58.632 43.478 0.00 0.00 36.74 4.26
500 501 3.198068 CATATAGGCAACAAGTGTCGCT 58.802 45.455 0.00 0.00 36.74 4.93
501 502 2.287915 CCATATAGGCAACAAGTGTCGC 59.712 50.000 0.00 0.00 36.74 5.19
502 503 3.309682 CACCATATAGGCAACAAGTGTCG 59.690 47.826 0.00 0.00 43.14 4.35
503 504 3.627577 CCACCATATAGGCAACAAGTGTC 59.372 47.826 0.00 0.00 43.14 3.67
504 505 3.620488 CCACCATATAGGCAACAAGTGT 58.380 45.455 0.00 0.00 43.14 3.55
514 515 7.155328 CAGTAAGACTAAAGCCACCATATAGG 58.845 42.308 0.00 0.00 45.67 2.57
515 516 7.727181 ACAGTAAGACTAAAGCCACCATATAG 58.273 38.462 0.00 0.00 0.00 1.31
516 517 7.670605 ACAGTAAGACTAAAGCCACCATATA 57.329 36.000 0.00 0.00 0.00 0.86
517 518 6.561519 ACAGTAAGACTAAAGCCACCATAT 57.438 37.500 0.00 0.00 0.00 1.78
518 519 6.170506 CAACAGTAAGACTAAAGCCACCATA 58.829 40.000 0.00 0.00 0.00 2.74
519 520 4.910458 ACAGTAAGACTAAAGCCACCAT 57.090 40.909 0.00 0.00 0.00 3.55
520 521 4.141574 ACAACAGTAAGACTAAAGCCACCA 60.142 41.667 0.00 0.00 0.00 4.17
521 522 4.386711 ACAACAGTAAGACTAAAGCCACC 58.613 43.478 0.00 0.00 0.00 4.61
522 523 6.872020 TCATACAACAGTAAGACTAAAGCCAC 59.128 38.462 0.00 0.00 0.00 5.01
523 524 6.872020 GTCATACAACAGTAAGACTAAAGCCA 59.128 38.462 4.35 0.00 34.99 4.75
524 525 7.097834 AGTCATACAACAGTAAGACTAAAGCC 58.902 38.462 10.67 0.00 42.02 4.35
525 526 8.535690 AAGTCATACAACAGTAAGACTAAAGC 57.464 34.615 12.21 0.00 42.62 3.51
527 528 9.826574 ACAAAGTCATACAACAGTAAGACTAAA 57.173 29.630 12.21 0.00 42.62 1.85
530 531 9.477484 CTTACAAAGTCATACAACAGTAAGACT 57.523 33.333 7.48 7.48 44.26 3.24
531 532 8.709646 CCTTACAAAGTCATACAACAGTAAGAC 58.290 37.037 0.00 3.57 39.45 3.01
532 533 8.426489 ACCTTACAAAGTCATACAACAGTAAGA 58.574 33.333 0.00 0.00 39.45 2.10
533 534 8.603242 ACCTTACAAAGTCATACAACAGTAAG 57.397 34.615 0.00 0.00 37.80 2.34
534 535 8.426489 AGACCTTACAAAGTCATACAACAGTAA 58.574 33.333 0.00 0.00 0.00 2.24
535 536 7.959175 AGACCTTACAAAGTCATACAACAGTA 58.041 34.615 0.00 0.00 0.00 2.74
536 537 6.827727 AGACCTTACAAAGTCATACAACAGT 58.172 36.000 0.00 0.00 0.00 3.55
537 538 7.226720 ACAAGACCTTACAAAGTCATACAACAG 59.773 37.037 0.00 0.00 0.00 3.16
538 539 7.011950 CACAAGACCTTACAAAGTCATACAACA 59.988 37.037 0.00 0.00 0.00 3.33
539 540 7.225931 TCACAAGACCTTACAAAGTCATACAAC 59.774 37.037 0.00 0.00 0.00 3.32
540 541 7.276658 TCACAAGACCTTACAAAGTCATACAA 58.723 34.615 0.00 0.00 0.00 2.41
541 542 6.822442 TCACAAGACCTTACAAAGTCATACA 58.178 36.000 0.00 0.00 0.00 2.29
542 543 7.152645 TCTCACAAGACCTTACAAAGTCATAC 58.847 38.462 0.00 0.00 0.00 2.39
543 544 7.297936 TCTCACAAGACCTTACAAAGTCATA 57.702 36.000 0.00 0.00 0.00 2.15
544 545 6.174720 TCTCACAAGACCTTACAAAGTCAT 57.825 37.500 0.00 0.00 0.00 3.06
545 546 5.607939 TCTCACAAGACCTTACAAAGTCA 57.392 39.130 0.00 0.00 0.00 3.41
546 547 8.603242 TTATTCTCACAAGACCTTACAAAGTC 57.397 34.615 0.00 0.00 0.00 3.01
547 548 9.574516 AATTATTCTCACAAGACCTTACAAAGT 57.425 29.630 0.00 0.00 0.00 2.66
555 556 9.853177 CCCTTATTAATTATTCTCACAAGACCT 57.147 33.333 0.00 0.00 0.00 3.85
556 557 9.628500 ACCCTTATTAATTATTCTCACAAGACC 57.372 33.333 0.00 0.00 0.00 3.85
626 627 1.541889 GCATGATTCGCATCTGAGGGA 60.542 52.381 0.00 0.00 34.15 4.20
756 757 3.570550 GCAATAGTCTGATCGTCTAGGGT 59.429 47.826 0.00 0.00 0.00 4.34
773 775 1.870402 CCACAAGACACGTGTGCAATA 59.130 47.619 28.82 0.00 44.13 1.90
786 788 1.843421 CCTGTTGGGTCCCACAAGA 59.157 57.895 11.24 0.00 30.78 3.02
804 806 0.455005 GCTCTTTGCTCAATGGCTCC 59.545 55.000 0.00 0.00 38.95 4.70
964 983 0.625849 GGGGATCTGAACACCACCAT 59.374 55.000 0.71 0.00 0.00 3.55
968 987 1.075374 CCAAAGGGGATCTGAACACCA 59.925 52.381 9.04 0.00 40.01 4.17
986 1005 2.685017 ACATGGAGCTCGGAGCCA 60.685 61.111 25.49 17.60 43.77 4.75
1030 1050 3.536917 CGCCCGGCTCTGTATCCA 61.537 66.667 8.05 0.00 0.00 3.41
1109 1129 0.105964 CTGGTTCCTCGGTGTGTGAA 59.894 55.000 0.00 0.00 0.00 3.18
1181 1202 6.540438 AAGATCCTGACCACGAAAATAGTA 57.460 37.500 0.00 0.00 0.00 1.82
1184 1205 5.800296 TCAAAGATCCTGACCACGAAAATA 58.200 37.500 0.00 0.00 0.00 1.40
1220 1242 0.311790 CTGCATGAACGCCAAACAGT 59.688 50.000 0.00 0.00 31.13 3.55
1301 1323 3.691118 GCACAACCATTCTTCATGCTCTA 59.309 43.478 0.00 0.00 0.00 2.43
1373 1395 4.269523 TGCGTGCTTTGCCCTCCT 62.270 61.111 0.00 0.00 0.00 3.69
1419 1441 6.207614 GCTTCCTAACCTTCTTCTTCAACATT 59.792 38.462 0.00 0.00 0.00 2.71
1473 1495 6.897706 AATGCCCAAAAGTAATTGCAAATT 57.102 29.167 1.71 1.18 31.81 1.82
1518 1541 7.767250 TCCATACAATTTCAACATTACACCA 57.233 32.000 0.00 0.00 0.00 4.17
1705 1802 3.393800 ACATGTTGGTCACTTCTTCTCG 58.606 45.455 0.00 0.00 0.00 4.04
1826 1944 2.094659 CGGCACTTGGCTCTACACG 61.095 63.158 0.90 0.00 44.01 4.49
2109 2233 4.202430 CCAGGTGTAAACCTCTACCAAAGT 60.202 45.833 0.00 0.00 38.22 2.66
2258 2383 0.179001 AGCCCTAAACGCCACAAACT 60.179 50.000 0.00 0.00 0.00 2.66
2298 2423 3.445096 CCCATGTCAAAGTCTTTCCATCC 59.555 47.826 0.00 0.00 0.00 3.51
2339 2464 5.175126 CAGTACAAACAAACGGACTCACTAG 59.825 44.000 0.00 0.00 0.00 2.57
2347 2472 5.821516 AACATTCAGTACAAACAAACGGA 57.178 34.783 0.00 0.00 0.00 4.69
2393 2518 6.878389 TCCAAAATTTCAGTGCAAAAGAAAGT 59.122 30.769 12.90 8.92 35.05 2.66
2398 2523 4.512571 CCCTCCAAAATTTCAGTGCAAAAG 59.487 41.667 0.00 0.00 0.00 2.27
2445 2570 4.832266 TGCCACTCTAACCAAAATCATGTT 59.168 37.500 0.00 0.00 0.00 2.71


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.