Multiple sequence alignment - TraesCS7B01G292400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G292400 chr7B 100.000 3448 0 0 1 3448 528872884 528876331 0.000000e+00 6368.0
1 TraesCS7B01G292400 chr7B 84.365 2245 205 59 444 2592 664399451 664397257 0.000000e+00 2067.0
2 TraesCS7B01G292400 chr7B 91.138 1512 107 12 1049 2548 73176689 73178185 0.000000e+00 2025.0
3 TraesCS7B01G292400 chr7B 92.416 712 44 2 2122 2827 73139870 73140577 0.000000e+00 1007.0
4 TraesCS7B01G292400 chr7B 94.366 426 18 4 1 421 73175413 73175837 0.000000e+00 649.0
5 TraesCS7B01G292400 chr7B 86.562 573 30 22 425 957 73175891 73176456 3.830000e-164 588.0
6 TraesCS7B01G292400 chr7B 90.385 260 18 5 2493 2746 73178185 73178443 5.510000e-88 335.0
7 TraesCS7B01G292400 chr7B 89.041 146 8 6 4 141 557490358 557490213 1.270000e-39 174.0
8 TraesCS7B01G292400 chr7B 89.216 102 6 2 192 293 664399641 664399545 4.670000e-24 122.0
9 TraesCS7B01G292400 chr7D 87.551 2466 201 55 425 2827 500775619 500778041 0.000000e+00 2756.0
10 TraesCS7B01G292400 chr7D 91.465 1570 100 14 991 2548 113583065 113584612 0.000000e+00 2126.0
11 TraesCS7B01G292400 chr7D 92.488 426 16 5 1 421 500774989 500775403 2.290000e-166 595.0
12 TraesCS7B01G292400 chr7D 92.248 258 16 2 2493 2746 113584612 113584869 2.530000e-96 363.0
13 TraesCS7B01G292400 chr7D 92.683 205 6 4 762 957 113582861 113583065 1.570000e-73 287.0
14 TraesCS7B01G292400 chr7D 92.661 109 8 0 4 112 523132565 523132457 1.280000e-34 158.0
15 TraesCS7B01G292400 chr7D 97.436 39 1 0 2789 2827 113584869 113584907 2.220000e-07 67.6
16 TraesCS7B01G292400 chr7A 84.296 2477 251 68 442 2827 566909830 566912259 0.000000e+00 2292.0
17 TraesCS7B01G292400 chr7A 87.433 1870 159 26 991 2827 566790499 566792325 0.000000e+00 2082.0
18 TraesCS7B01G292400 chr7A 83.830 2047 232 57 806 2802 566989477 566991474 0.000000e+00 1855.0
19 TraesCS7B01G292400 chr7A 90.712 1292 89 13 1270 2548 619305129 619306402 0.000000e+00 1692.0
20 TraesCS7B01G292400 chr7A 96.200 421 16 0 1 421 566789485 566789905 0.000000e+00 689.0
21 TraesCS7B01G292400 chr7A 85.000 560 34 21 425 957 566789963 566790499 1.100000e-144 523.0
22 TraesCS7B01G292400 chr7A 88.462 260 21 5 2493 2744 619306402 619306660 4.320000e-79 305.0
23 TraesCS7B01G292400 chr7A 78.174 449 53 18 192 619 566988828 566989252 9.560000e-61 244.0
24 TraesCS7B01G292400 chr7A 84.615 143 16 4 6 143 566912477 566912618 1.670000e-28 137.0
25 TraesCS7B01G292400 chr7A 97.436 39 1 0 2789 2827 619306662 619306700 2.220000e-07 67.6
26 TraesCS7B01G292400 chrUn 84.038 2412 259 66 442 2802 86611602 86613938 0.000000e+00 2206.0
27 TraesCS7B01G292400 chrUn 91.176 102 4 2 192 293 86611297 86611393 2.160000e-27 134.0
28 TraesCS7B01G292400 chr3A 84.707 2184 209 68 490 2592 732405069 732402930 0.000000e+00 2067.0
29 TraesCS7B01G292400 chr3B 87.821 1634 162 19 986 2592 810194230 810192607 0.000000e+00 1881.0
30 TraesCS7B01G292400 chr3B 85.628 1162 134 26 989 2140 806058479 806057341 0.000000e+00 1190.0
31 TraesCS7B01G292400 chr3B 78.515 377 43 21 257 619 805812633 805812281 2.700000e-51 213.0
32 TraesCS7B01G292400 chr3B 85.714 147 17 2 7 149 806037913 806037767 5.960000e-33 152.0
33 TraesCS7B01G292400 chr3B 87.692 130 5 6 490 619 810195314 810195196 1.290000e-29 141.0
34 TraesCS7B01G292400 chr3B 87.288 118 11 2 30 143 806064575 806064458 7.760000e-27 132.0
35 TraesCS7B01G292400 chr5A 82.276 1749 244 38 998 2729 605245730 605244031 0.000000e+00 1452.0
36 TraesCS7B01G292400 chr5B 81.648 1760 255 40 999 2729 595010251 595008531 0.000000e+00 1399.0
37 TraesCS7B01G292400 chr3D 83.346 1369 176 40 792 2140 598726294 598724958 0.000000e+00 1218.0
38 TraesCS7B01G292400 chr3D 82.126 621 87 12 2185 2790 598724959 598724348 8.540000e-141 510.0
39 TraesCS7B01G292400 chr3D 95.930 172 4 1 1 169 603683582 603683753 3.390000e-70 276.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G292400 chr7B 528872884 528876331 3447 False 6368.00 6368 100.000000 1 3448 1 chr7B.!!$F2 3447
1 TraesCS7B01G292400 chr7B 664397257 664399641 2384 True 1094.50 2067 86.790500 192 2592 2 chr7B.!!$R2 2400
2 TraesCS7B01G292400 chr7B 73139870 73140577 707 False 1007.00 1007 92.416000 2122 2827 1 chr7B.!!$F1 705
3 TraesCS7B01G292400 chr7B 73175413 73178443 3030 False 899.25 2025 90.612750 1 2746 4 chr7B.!!$F3 2745
4 TraesCS7B01G292400 chr7D 500774989 500778041 3052 False 1675.50 2756 90.019500 1 2827 2 chr7D.!!$F2 2826
5 TraesCS7B01G292400 chr7D 113582861 113584907 2046 False 710.90 2126 93.458000 762 2827 4 chr7D.!!$F1 2065
6 TraesCS7B01G292400 chr7A 566909830 566912618 2788 False 1214.50 2292 84.455500 6 2827 2 chr7A.!!$F2 2821
7 TraesCS7B01G292400 chr7A 566789485 566792325 2840 False 1098.00 2082 89.544333 1 2827 3 chr7A.!!$F1 2826
8 TraesCS7B01G292400 chr7A 566988828 566991474 2646 False 1049.50 1855 81.002000 192 2802 2 chr7A.!!$F3 2610
9 TraesCS7B01G292400 chr7A 619305129 619306700 1571 False 688.20 1692 92.203333 1270 2827 3 chr7A.!!$F4 1557
10 TraesCS7B01G292400 chrUn 86611297 86613938 2641 False 1170.00 2206 87.607000 192 2802 2 chrUn.!!$F1 2610
11 TraesCS7B01G292400 chr3A 732402930 732405069 2139 True 2067.00 2067 84.707000 490 2592 1 chr3A.!!$R1 2102
12 TraesCS7B01G292400 chr3B 806057341 806058479 1138 True 1190.00 1190 85.628000 989 2140 1 chr3B.!!$R3 1151
13 TraesCS7B01G292400 chr3B 810192607 810195314 2707 True 1011.00 1881 87.756500 490 2592 2 chr3B.!!$R5 2102
14 TraesCS7B01G292400 chr5A 605244031 605245730 1699 True 1452.00 1452 82.276000 998 2729 1 chr5A.!!$R1 1731
15 TraesCS7B01G292400 chr5B 595008531 595010251 1720 True 1399.00 1399 81.648000 999 2729 1 chr5B.!!$R1 1730
16 TraesCS7B01G292400 chr3D 598724348 598726294 1946 True 864.00 1218 82.736000 792 2790 2 chr3D.!!$R1 1998

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
619 1034 0.400594 CAAAACCGGAGAGAACCCCT 59.599 55.0 9.46 0.0 0.0 4.79 F
1067 2452 0.101219 GTTCTGAATCCCAATGGCGC 59.899 55.0 0.00 0.0 0.0 6.53 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1592 3029 0.108138 CTGTGATGGTCCCGTCCTTC 60.108 60.0 3.15 0.0 33.83 3.46 R
2899 4533 0.036388 AGACGCAATCAATGGGACGT 60.036 50.0 0.00 0.0 44.39 4.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
127 131 1.528129 GTCCTGTTGAAGCCCAGAAG 58.472 55.000 0.00 0.00 0.00 2.85
143 147 5.355596 CCCAGAAGTAATGAAGACTAGCAG 58.644 45.833 0.00 0.00 0.00 4.24
176 180 6.539649 TGCACTACATGTTCAGTTTCTTAC 57.460 37.500 2.30 0.00 0.00 2.34
177 181 6.288294 TGCACTACATGTTCAGTTTCTTACT 58.712 36.000 2.30 0.00 37.68 2.24
178 182 6.765989 TGCACTACATGTTCAGTTTCTTACTT 59.234 34.615 2.30 0.00 33.85 2.24
179 183 7.929245 TGCACTACATGTTCAGTTTCTTACTTA 59.071 33.333 2.30 0.00 33.85 2.24
180 184 8.936864 GCACTACATGTTCAGTTTCTTACTTAT 58.063 33.333 2.30 0.00 33.85 1.73
357 520 5.464030 TTGGTAGTCACTTGGTTCTACTC 57.536 43.478 0.00 0.00 34.85 2.59
396 567 4.430007 TGCTTATTAGTACCAGCAAGTCG 58.570 43.478 0.00 0.00 39.32 4.18
414 585 3.255888 AGTCGTCATGAGAAACACAGCTA 59.744 43.478 0.00 0.00 0.00 3.32
421 592 6.591834 GTCATGAGAAACACAGCTACTTATGT 59.408 38.462 0.00 0.00 0.00 2.29
422 593 7.118390 GTCATGAGAAACACAGCTACTTATGTT 59.882 37.037 0.00 0.00 36.86 2.71
431 814 9.587772 AACACAGCTACTTATGTTCTATAGTTG 57.412 33.333 0.00 0.00 29.30 3.16
452 835 6.435904 AGTTGGAGGCTTAGAGCATATAGTAG 59.564 42.308 2.04 0.00 44.75 2.57
593 1008 4.649705 TCCAACTGGGGCGGAGGA 62.650 66.667 0.00 0.00 37.22 3.71
595 1010 2.190578 CAACTGGGGCGGAGGATC 59.809 66.667 0.00 0.00 0.00 3.36
619 1034 0.400594 CAAAACCGGAGAGAACCCCT 59.599 55.000 9.46 0.00 0.00 4.79
834 1372 0.790814 CCCGACTTCGACTTGCTTTC 59.209 55.000 0.00 0.00 43.02 2.62
1036 2231 2.035155 TCCTCGGCCTCGTTCTCA 59.965 61.111 0.00 0.00 37.69 3.27
1067 2452 0.101219 GTTCTGAATCCCAATGGCGC 59.899 55.000 0.00 0.00 0.00 6.53
1146 2531 3.835978 TCTTTGTCTTCGGGGATGACTTA 59.164 43.478 11.39 0.46 37.53 2.24
1385 2820 1.667236 TCCCTGCTGCATCGTAATTG 58.333 50.000 1.31 0.00 0.00 2.32
1431 2868 5.009631 ACTAATAACTTGCAGCAACCATGA 58.990 37.500 2.83 0.00 0.00 3.07
1448 2885 1.139498 TGATGGGGTTGGAGGAAGCA 61.139 55.000 0.00 0.00 33.38 3.91
1612 3049 1.553690 AAGGACGGGACCATCACAGG 61.554 60.000 0.00 0.00 0.00 4.00
1613 3050 1.987855 GGACGGGACCATCACAGGA 60.988 63.158 0.00 0.00 0.00 3.86
1628 3065 6.461370 CCATCACAGGAAAACAATTGAGTCAA 60.461 38.462 13.59 8.27 0.00 3.18
1640 3077 0.530744 TGAGTCAATCCGTAGCGCTT 59.469 50.000 18.68 0.00 0.00 4.68
1710 3172 1.100510 CAGCCCCAATGATGTGAGTG 58.899 55.000 0.00 0.00 0.00 3.51
1908 3380 6.245408 TCTTGTCAATAACTTGCACCCTATT 58.755 36.000 0.00 0.00 32.11 1.73
1937 3409 2.241880 CGTCACACACCCGAACCAC 61.242 63.158 0.00 0.00 0.00 4.16
1996 3468 6.108015 GGTGCATCCATTCACAACAATAATT 58.892 36.000 0.00 0.00 35.04 1.40
2342 3825 4.816392 TGTACACTGTATGCGACAATTCT 58.184 39.130 0.00 0.00 37.70 2.40
2551 4152 5.366768 AGACTGAGATTTTCCCGATTCCATA 59.633 40.000 0.00 0.00 0.00 2.74
2706 4335 7.878477 CTCAATAAGCTCAAAGCAATTTCAA 57.122 32.000 1.29 0.00 45.56 2.69
2747 4381 5.991328 TGTCGGTTTATAGGTAGTCTACG 57.009 43.478 3.92 0.00 0.00 3.51
2771 4405 2.094182 GTCAGCATCTTCTACGGGTGAA 60.094 50.000 0.00 0.00 39.19 3.18
2794 4428 3.378427 AGGTGCTTTGTCTTTGAACTCAC 59.622 43.478 0.00 0.00 0.00 3.51
2827 4461 5.716703 AGGGTAAATTTGCCTATGGATATGC 59.283 40.000 22.53 4.39 33.03 3.14
2829 4463 5.414454 GGTAAATTTGCCTATGGATATGCGA 59.586 40.000 17.21 0.00 0.00 5.10
2831 4465 6.403866 AAATTTGCCTATGGATATGCGAAA 57.596 33.333 0.00 0.00 33.16 3.46
2832 4466 6.403866 AATTTGCCTATGGATATGCGAAAA 57.596 33.333 0.00 0.00 33.16 2.29
2833 4467 4.829064 TTGCCTATGGATATGCGAAAAC 57.171 40.909 0.00 0.00 0.00 2.43
2834 4468 4.085357 TGCCTATGGATATGCGAAAACT 57.915 40.909 0.00 0.00 0.00 2.66
2836 4470 4.887071 TGCCTATGGATATGCGAAAACTTT 59.113 37.500 0.00 0.00 0.00 2.66
2837 4471 5.008613 TGCCTATGGATATGCGAAAACTTTC 59.991 40.000 0.00 0.00 0.00 2.62
2838 4472 5.239525 GCCTATGGATATGCGAAAACTTTCT 59.760 40.000 1.03 0.00 35.07 2.52
2840 4474 7.355778 CCTATGGATATGCGAAAACTTTCTTC 58.644 38.462 1.03 0.00 35.07 2.87
2842 4476 9.261180 CTATGGATATGCGAAAACTTTCTTCTA 57.739 33.333 1.03 0.00 35.07 2.10
2843 4477 7.915293 TGGATATGCGAAAACTTTCTTCTAA 57.085 32.000 1.03 0.00 35.07 2.10
2844 4478 7.748847 TGGATATGCGAAAACTTTCTTCTAAC 58.251 34.615 1.03 0.00 35.07 2.34
2846 4480 7.148306 GGATATGCGAAAACTTTCTTCTAACCA 60.148 37.037 1.03 0.00 35.07 3.67
2847 4481 5.164606 TGCGAAAACTTTCTTCTAACCAC 57.835 39.130 1.03 0.00 35.07 4.16
2848 4482 4.209112 GCGAAAACTTTCTTCTAACCACG 58.791 43.478 1.03 0.00 35.07 4.94
2849 4483 4.769215 CGAAAACTTTCTTCTAACCACGG 58.231 43.478 1.03 0.00 35.07 4.94
2850 4484 4.534168 GAAAACTTTCTTCTAACCACGGC 58.466 43.478 0.00 0.00 34.41 5.68
2851 4485 1.792006 ACTTTCTTCTAACCACGGCG 58.208 50.000 4.80 4.80 0.00 6.46
2853 4487 1.725164 CTTTCTTCTAACCACGGCGAC 59.275 52.381 16.62 0.00 0.00 5.19
2854 4488 0.037975 TTCTTCTAACCACGGCGACC 60.038 55.000 16.62 0.00 0.00 4.79
2855 4489 1.180456 TCTTCTAACCACGGCGACCA 61.180 55.000 16.62 0.00 0.00 4.02
2857 4491 0.322322 TTCTAACCACGGCGACCATT 59.678 50.000 16.62 4.74 0.00 3.16
2859 4493 0.390603 CTAACCACGGCGACCATTGA 60.391 55.000 16.62 0.00 0.00 2.57
2860 4494 0.671163 TAACCACGGCGACCATTGAC 60.671 55.000 16.62 0.00 0.00 3.18
2861 4495 3.124921 CCACGGCGACCATTGACC 61.125 66.667 16.62 0.00 0.00 4.02
2862 4496 2.047274 CACGGCGACCATTGACCT 60.047 61.111 16.62 0.00 0.00 3.85
2864 4498 2.283529 ACGGCGACCATTGACCTCT 61.284 57.895 16.62 0.00 0.00 3.69
2865 4499 1.079127 CGGCGACCATTGACCTCTT 60.079 57.895 0.00 0.00 0.00 2.85
2867 4501 1.404986 CGGCGACCATTGACCTCTTTA 60.405 52.381 0.00 0.00 0.00 1.85
2868 4502 2.741878 CGGCGACCATTGACCTCTTTAT 60.742 50.000 0.00 0.00 0.00 1.40
2869 4503 2.872858 GGCGACCATTGACCTCTTTATC 59.127 50.000 0.00 0.00 0.00 1.75
2870 4504 3.432326 GGCGACCATTGACCTCTTTATCT 60.432 47.826 0.00 0.00 0.00 1.98
2871 4505 3.557595 GCGACCATTGACCTCTTTATCTG 59.442 47.826 0.00 0.00 0.00 2.90
2872 4506 4.122776 CGACCATTGACCTCTTTATCTGG 58.877 47.826 0.00 0.00 0.00 3.86
2876 4510 4.164988 CCATTGACCTCTTTATCTGGACCT 59.835 45.833 0.00 0.00 0.00 3.85
2877 4511 5.339530 CCATTGACCTCTTTATCTGGACCTT 60.340 44.000 0.00 0.00 0.00 3.50
2878 4512 5.843019 TTGACCTCTTTATCTGGACCTTT 57.157 39.130 0.00 0.00 0.00 3.11
2880 4514 5.560724 TGACCTCTTTATCTGGACCTTTTG 58.439 41.667 0.00 0.00 0.00 2.44
2881 4515 4.336280 ACCTCTTTATCTGGACCTTTTGC 58.664 43.478 0.00 0.00 0.00 3.68
2883 4517 4.952335 CCTCTTTATCTGGACCTTTTGCAT 59.048 41.667 0.00 0.00 0.00 3.96
2884 4518 5.163581 CCTCTTTATCTGGACCTTTTGCATG 60.164 44.000 0.00 0.00 0.00 4.06
2885 4519 5.324409 TCTTTATCTGGACCTTTTGCATGT 58.676 37.500 0.00 0.00 0.00 3.21
2886 4520 5.415701 TCTTTATCTGGACCTTTTGCATGTC 59.584 40.000 0.00 0.00 0.00 3.06
2888 4522 3.228188 TCTGGACCTTTTGCATGTCTT 57.772 42.857 0.00 0.00 0.00 3.01
2889 4523 3.565307 TCTGGACCTTTTGCATGTCTTT 58.435 40.909 0.00 0.00 0.00 2.52
2890 4524 4.724399 TCTGGACCTTTTGCATGTCTTTA 58.276 39.130 0.00 0.00 0.00 1.85
2893 4527 4.079253 GGACCTTTTGCATGTCTTTAGGA 58.921 43.478 9.12 0.00 0.00 2.94
2895 4529 5.185828 GGACCTTTTGCATGTCTTTAGGATT 59.814 40.000 9.12 0.00 0.00 3.01
2896 4530 6.029346 ACCTTTTGCATGTCTTTAGGATTG 57.971 37.500 9.12 0.00 0.00 2.67
2897 4531 4.866486 CCTTTTGCATGTCTTTAGGATTGC 59.134 41.667 0.00 0.00 36.85 3.56
2898 4532 4.454728 TTTGCATGTCTTTAGGATTGCC 57.545 40.909 0.00 0.00 36.05 4.52
2899 4533 3.084536 TGCATGTCTTTAGGATTGCCA 57.915 42.857 0.00 0.00 36.05 4.92
2900 4534 2.754552 TGCATGTCTTTAGGATTGCCAC 59.245 45.455 0.00 0.00 36.05 5.01
2901 4535 2.223340 GCATGTCTTTAGGATTGCCACG 60.223 50.000 0.00 0.00 36.29 4.94
2902 4536 2.851263 TGTCTTTAGGATTGCCACGT 57.149 45.000 0.00 0.00 36.29 4.49
2903 4537 2.695359 TGTCTTTAGGATTGCCACGTC 58.305 47.619 0.00 0.00 36.29 4.34
2904 4538 2.007608 GTCTTTAGGATTGCCACGTCC 58.992 52.381 0.00 0.00 36.29 4.79
2905 4539 1.065709 TCTTTAGGATTGCCACGTCCC 60.066 52.381 0.00 0.00 35.00 4.46
2906 4540 0.693622 TTTAGGATTGCCACGTCCCA 59.306 50.000 0.00 0.00 35.00 4.37
2907 4541 0.916086 TTAGGATTGCCACGTCCCAT 59.084 50.000 0.00 0.00 35.00 4.00
2908 4542 0.916086 TAGGATTGCCACGTCCCATT 59.084 50.000 0.00 0.00 35.00 3.16
2909 4543 0.680921 AGGATTGCCACGTCCCATTG 60.681 55.000 0.00 0.00 35.00 2.82
2910 4544 0.679640 GGATTGCCACGTCCCATTGA 60.680 55.000 0.00 0.00 0.00 2.57
2911 4545 1.392589 GATTGCCACGTCCCATTGAT 58.607 50.000 0.00 0.00 0.00 2.57
2912 4546 1.750778 GATTGCCACGTCCCATTGATT 59.249 47.619 0.00 0.00 0.00 2.57
2913 4547 0.887247 TTGCCACGTCCCATTGATTG 59.113 50.000 0.00 0.00 0.00 2.67
2914 4548 1.139520 GCCACGTCCCATTGATTGC 59.860 57.895 0.00 0.00 0.00 3.56
2915 4549 1.429021 CCACGTCCCATTGATTGCG 59.571 57.895 0.00 0.00 0.00 4.85
2916 4550 1.305219 CCACGTCCCATTGATTGCGT 61.305 55.000 0.00 0.00 0.00 5.24
2917 4551 0.096976 CACGTCCCATTGATTGCGTC 59.903 55.000 0.00 0.00 0.00 5.19
2918 4552 0.036388 ACGTCCCATTGATTGCGTCT 60.036 50.000 0.00 0.00 0.00 4.18
2919 4553 0.374758 CGTCCCATTGATTGCGTCTG 59.625 55.000 0.00 0.00 0.00 3.51
2920 4554 0.734889 GTCCCATTGATTGCGTCTGG 59.265 55.000 0.00 0.00 0.00 3.86
2921 4555 0.327924 TCCCATTGATTGCGTCTGGT 59.672 50.000 0.00 0.00 0.00 4.00
2922 4556 1.557371 TCCCATTGATTGCGTCTGGTA 59.443 47.619 0.00 0.00 0.00 3.25
2923 4557 2.172505 TCCCATTGATTGCGTCTGGTAT 59.827 45.455 0.00 0.00 0.00 2.73
2924 4558 3.389656 TCCCATTGATTGCGTCTGGTATA 59.610 43.478 0.00 0.00 0.00 1.47
2925 4559 3.748048 CCCATTGATTGCGTCTGGTATAG 59.252 47.826 0.00 0.00 0.00 1.31
2926 4560 3.187227 CCATTGATTGCGTCTGGTATAGC 59.813 47.826 0.00 0.00 0.00 2.97
2927 4561 3.819564 TTGATTGCGTCTGGTATAGCT 57.180 42.857 3.20 0.00 0.00 3.32
2928 4562 4.929819 TTGATTGCGTCTGGTATAGCTA 57.070 40.909 0.00 0.00 0.00 3.32
2929 4563 5.468540 TTGATTGCGTCTGGTATAGCTAT 57.531 39.130 11.77 11.77 0.00 2.97
2930 4564 5.060662 TGATTGCGTCTGGTATAGCTATC 57.939 43.478 10.16 2.17 40.44 2.08
2931 4565 4.767409 TGATTGCGTCTGGTATAGCTATCT 59.233 41.667 10.16 0.00 40.58 1.98
2932 4566 4.768130 TTGCGTCTGGTATAGCTATCTC 57.232 45.455 10.16 4.96 0.00 2.75
2933 4567 3.751518 TGCGTCTGGTATAGCTATCTCA 58.248 45.455 10.16 8.91 0.00 3.27
2934 4568 4.336280 TGCGTCTGGTATAGCTATCTCAT 58.664 43.478 10.16 0.00 0.00 2.90
2935 4569 4.767409 TGCGTCTGGTATAGCTATCTCATT 59.233 41.667 10.16 0.00 0.00 2.57
2936 4570 5.243954 TGCGTCTGGTATAGCTATCTCATTT 59.756 40.000 10.16 0.00 0.00 2.32
2937 4571 5.574830 GCGTCTGGTATAGCTATCTCATTTG 59.425 44.000 10.16 0.00 0.00 2.32
2938 4572 6.682746 CGTCTGGTATAGCTATCTCATTTGT 58.317 40.000 10.16 0.00 0.00 2.83
2939 4573 7.575155 GCGTCTGGTATAGCTATCTCATTTGTA 60.575 40.741 10.16 0.00 0.00 2.41
2940 4574 8.462811 CGTCTGGTATAGCTATCTCATTTGTAT 58.537 37.037 10.16 0.00 0.00 2.29
2951 4585 9.294030 GCTATCTCATTTGTATTCAAAAACTGG 57.706 33.333 1.36 0.00 44.97 4.00
2960 4594 9.921637 TTTGTATTCAAAAACTGGTATTCATCC 57.078 29.630 0.00 0.00 40.08 3.51
2961 4595 8.877864 TGTATTCAAAAACTGGTATTCATCCT 57.122 30.769 0.00 0.00 0.00 3.24
2962 4596 8.956426 TGTATTCAAAAACTGGTATTCATCCTC 58.044 33.333 0.00 0.00 0.00 3.71
2963 4597 9.178758 GTATTCAAAAACTGGTATTCATCCTCT 57.821 33.333 0.00 0.00 0.00 3.69
2965 4599 9.927081 ATTCAAAAACTGGTATTCATCCTCTAT 57.073 29.630 0.00 0.00 0.00 1.98
2966 4600 8.737168 TCAAAAACTGGTATTCATCCTCTATG 57.263 34.615 0.00 0.00 36.88 2.23
2967 4601 8.328758 TCAAAAACTGGTATTCATCCTCTATGT 58.671 33.333 0.00 0.00 36.89 2.29
2968 4602 8.616076 CAAAAACTGGTATTCATCCTCTATGTC 58.384 37.037 0.00 0.00 36.89 3.06
2969 4603 6.426646 AACTGGTATTCATCCTCTATGTCC 57.573 41.667 0.00 0.00 36.89 4.02
2970 4604 5.467738 ACTGGTATTCATCCTCTATGTCCA 58.532 41.667 0.00 0.00 36.89 4.02
2971 4605 6.087456 ACTGGTATTCATCCTCTATGTCCAT 58.913 40.000 0.00 0.00 36.89 3.41
2972 4606 6.013898 ACTGGTATTCATCCTCTATGTCCATG 60.014 42.308 0.00 0.00 36.89 3.66
2973 4607 5.846164 TGGTATTCATCCTCTATGTCCATGT 59.154 40.000 0.00 0.00 36.89 3.21
2974 4608 6.329986 TGGTATTCATCCTCTATGTCCATGTT 59.670 38.462 0.00 0.00 36.89 2.71
2975 4609 6.876257 GGTATTCATCCTCTATGTCCATGTTC 59.124 42.308 0.00 0.00 36.89 3.18
2976 4610 6.760440 ATTCATCCTCTATGTCCATGTTCT 57.240 37.500 0.00 0.00 36.89 3.01
2977 4611 5.541953 TCATCCTCTATGTCCATGTTCTG 57.458 43.478 0.00 0.00 36.89 3.02
2978 4612 4.346127 TCATCCTCTATGTCCATGTTCTGG 59.654 45.833 0.00 0.00 39.26 3.86
2979 4613 3.724478 TCCTCTATGTCCATGTTCTGGT 58.276 45.455 0.00 0.00 46.08 4.00
2980 4614 4.878968 TCCTCTATGTCCATGTTCTGGTA 58.121 43.478 0.00 0.00 46.08 3.25
2981 4615 4.649674 TCCTCTATGTCCATGTTCTGGTAC 59.350 45.833 0.00 0.00 46.08 3.34
2982 4616 4.405680 CCTCTATGTCCATGTTCTGGTACA 59.594 45.833 0.00 0.00 46.08 2.90
2983 4617 5.104941 CCTCTATGTCCATGTTCTGGTACAA 60.105 44.000 0.00 0.00 46.08 2.41
2984 4618 5.977635 TCTATGTCCATGTTCTGGTACAAG 58.022 41.667 0.00 0.00 46.08 3.16
2985 4619 4.640771 ATGTCCATGTTCTGGTACAAGT 57.359 40.909 0.00 0.00 46.08 3.16
2986 4620 4.431416 TGTCCATGTTCTGGTACAAGTT 57.569 40.909 0.00 0.00 46.08 2.66
2987 4621 4.385825 TGTCCATGTTCTGGTACAAGTTC 58.614 43.478 0.00 0.00 46.08 3.01
2988 4622 4.102524 TGTCCATGTTCTGGTACAAGTTCT 59.897 41.667 0.00 0.00 46.08 3.01
2989 4623 5.063880 GTCCATGTTCTGGTACAAGTTCTT 58.936 41.667 0.00 0.00 46.08 2.52
2990 4624 5.179555 GTCCATGTTCTGGTACAAGTTCTTC 59.820 44.000 0.00 0.00 46.08 2.87
2991 4625 5.071788 TCCATGTTCTGGTACAAGTTCTTCT 59.928 40.000 0.00 0.00 46.08 2.85
2992 4626 5.765182 CCATGTTCTGGTACAAGTTCTTCTT 59.235 40.000 0.00 0.00 40.49 2.52
2993 4627 6.263168 CCATGTTCTGGTACAAGTTCTTCTTT 59.737 38.462 0.00 0.00 40.49 2.52
2994 4628 6.920569 TGTTCTGGTACAAGTTCTTCTTTC 57.079 37.500 0.00 0.00 38.70 2.62
2995 4629 6.411376 TGTTCTGGTACAAGTTCTTCTTTCA 58.589 36.000 0.00 0.00 38.70 2.69
2996 4630 7.054124 TGTTCTGGTACAAGTTCTTCTTTCAT 58.946 34.615 0.00 0.00 38.70 2.57
2997 4631 7.556275 TGTTCTGGTACAAGTTCTTCTTTCATT 59.444 33.333 0.00 0.00 38.70 2.57
2998 4632 8.406297 GTTCTGGTACAAGTTCTTCTTTCATTT 58.594 33.333 0.00 0.00 38.70 2.32
2999 4633 9.621629 TTCTGGTACAAGTTCTTCTTTCATTTA 57.378 29.630 0.00 0.00 38.70 1.40
3000 4634 9.052759 TCTGGTACAAGTTCTTCTTTCATTTAC 57.947 33.333 0.00 0.00 38.70 2.01
3001 4635 8.974060 TGGTACAAGTTCTTCTTTCATTTACT 57.026 30.769 0.00 0.00 33.63 2.24
3002 4636 8.836413 TGGTACAAGTTCTTCTTTCATTTACTG 58.164 33.333 0.00 0.00 33.63 2.74
3003 4637 8.837389 GGTACAAGTTCTTCTTTCATTTACTGT 58.163 33.333 0.00 0.00 33.63 3.55
3031 4665 6.857777 ATAGCTTCATGTATCAAGTCTTGC 57.142 37.500 7.78 0.00 0.00 4.01
3032 4666 4.841422 AGCTTCATGTATCAAGTCTTGCT 58.159 39.130 7.78 0.61 0.00 3.91
3033 4667 4.874966 AGCTTCATGTATCAAGTCTTGCTC 59.125 41.667 7.78 1.84 0.00 4.26
3034 4668 4.034975 GCTTCATGTATCAAGTCTTGCTCC 59.965 45.833 7.78 0.00 0.00 4.70
3035 4669 4.142609 TCATGTATCAAGTCTTGCTCCC 57.857 45.455 7.78 0.00 0.00 4.30
3036 4670 2.672961 TGTATCAAGTCTTGCTCCCG 57.327 50.000 7.78 0.00 0.00 5.14
3037 4671 1.207089 TGTATCAAGTCTTGCTCCCGG 59.793 52.381 7.78 0.00 0.00 5.73
3038 4672 1.207329 GTATCAAGTCTTGCTCCCGGT 59.793 52.381 7.78 0.00 0.00 5.28
3039 4673 0.250513 ATCAAGTCTTGCTCCCGGTC 59.749 55.000 7.78 0.00 0.00 4.79
3040 4674 1.376037 CAAGTCTTGCTCCCGGTCC 60.376 63.158 0.00 0.00 0.00 4.46
3041 4675 1.841556 AAGTCTTGCTCCCGGTCCA 60.842 57.895 0.00 0.00 0.00 4.02
3042 4676 1.201429 AAGTCTTGCTCCCGGTCCAT 61.201 55.000 0.00 0.00 0.00 3.41
3043 4677 1.450312 GTCTTGCTCCCGGTCCATG 60.450 63.158 0.00 0.00 0.00 3.66
3044 4678 2.124570 CTTGCTCCCGGTCCATGG 60.125 66.667 4.97 4.97 0.00 3.66
3045 4679 4.424711 TTGCTCCCGGTCCATGGC 62.425 66.667 6.96 1.78 0.00 4.40
3047 4681 4.864334 GCTCCCGGTCCATGGCAG 62.864 72.222 6.96 3.03 0.00 4.85
3048 4682 4.864334 CTCCCGGTCCATGGCAGC 62.864 72.222 6.96 5.10 0.00 5.25
3050 4684 4.864334 CCCGGTCCATGGCAGCTC 62.864 72.222 6.96 0.00 0.00 4.09
3051 4685 4.100084 CCGGTCCATGGCAGCTCA 62.100 66.667 6.96 0.00 0.00 4.26
3052 4686 2.821366 CGGTCCATGGCAGCTCAC 60.821 66.667 6.96 0.00 0.00 3.51
3053 4687 2.352422 GGTCCATGGCAGCTCACA 59.648 61.111 6.96 0.00 0.00 3.58
3054 4688 2.042831 GGTCCATGGCAGCTCACAC 61.043 63.158 6.96 0.00 0.00 3.82
3055 4689 1.302752 GTCCATGGCAGCTCACACA 60.303 57.895 6.96 0.00 0.00 3.72
3056 4690 1.302752 TCCATGGCAGCTCACACAC 60.303 57.895 6.96 0.00 0.00 3.82
3057 4691 2.683859 CCATGGCAGCTCACACACG 61.684 63.158 0.00 0.00 0.00 4.49
3058 4692 1.668793 CATGGCAGCTCACACACGA 60.669 57.895 0.00 0.00 0.00 4.35
3059 4693 1.022982 CATGGCAGCTCACACACGAT 61.023 55.000 0.00 0.00 0.00 3.73
3060 4694 1.022982 ATGGCAGCTCACACACGATG 61.023 55.000 0.00 0.00 0.00 3.84
3061 4695 2.477845 GCAGCTCACACACGATGC 59.522 61.111 0.00 0.00 0.00 3.91
3062 4696 2.774126 CAGCTCACACACGATGCG 59.226 61.111 0.00 0.00 0.00 4.73
3063 4697 3.114616 AGCTCACACACGATGCGC 61.115 61.111 0.00 0.00 0.00 6.09
3065 4699 4.489795 CTCACACACGATGCGCGC 62.490 66.667 27.26 27.26 46.04 6.86
3070 4704 4.522689 ACACGATGCGCGCCCATA 62.523 61.111 30.77 10.60 46.04 2.74
3071 4705 4.000557 CACGATGCGCGCCCATAC 62.001 66.667 30.77 13.76 46.04 2.39
3073 4707 4.969196 CGATGCGCGCCCATACCT 62.969 66.667 30.77 3.83 0.00 3.08
3074 4708 3.349006 GATGCGCGCCCATACCTG 61.349 66.667 30.77 0.00 0.00 4.00
3075 4709 4.935495 ATGCGCGCCCATACCTGG 62.935 66.667 30.77 0.00 42.73 4.45
3081 4715 4.534401 GCCCATACCTGGACGAAC 57.466 61.111 0.00 0.00 46.37 3.95
3082 4716 1.905512 GCCCATACCTGGACGAACT 59.094 57.895 0.00 0.00 46.37 3.01
3083 4717 0.252197 GCCCATACCTGGACGAACTT 59.748 55.000 0.00 0.00 46.37 2.66
3084 4718 1.742750 GCCCATACCTGGACGAACTTC 60.743 57.143 0.00 0.00 46.37 3.01
3085 4719 1.553248 CCCATACCTGGACGAACTTCA 59.447 52.381 0.00 0.00 46.37 3.02
3086 4720 2.170607 CCCATACCTGGACGAACTTCAT 59.829 50.000 0.00 0.00 46.37 2.57
3087 4721 3.458189 CCATACCTGGACGAACTTCATC 58.542 50.000 0.00 0.00 46.37 2.92
3088 4722 3.133003 CCATACCTGGACGAACTTCATCT 59.867 47.826 0.00 0.00 46.37 2.90
3089 4723 4.341235 CCATACCTGGACGAACTTCATCTA 59.659 45.833 0.00 0.00 46.37 1.98
3090 4724 5.011125 CCATACCTGGACGAACTTCATCTAT 59.989 44.000 0.00 0.00 46.37 1.98
3091 4725 4.657436 ACCTGGACGAACTTCATCTATC 57.343 45.455 0.00 0.00 0.00 2.08
3092 4726 3.385111 ACCTGGACGAACTTCATCTATCC 59.615 47.826 0.00 0.00 0.00 2.59
3093 4727 3.384789 CCTGGACGAACTTCATCTATCCA 59.615 47.826 0.00 0.00 33.61 3.41
3094 4728 4.363999 CTGGACGAACTTCATCTATCCAC 58.636 47.826 0.00 0.00 32.18 4.02
3095 4729 3.132289 TGGACGAACTTCATCTATCCACC 59.868 47.826 0.00 0.00 31.17 4.61
3096 4730 3.492829 GGACGAACTTCATCTATCCACCC 60.493 52.174 0.00 0.00 0.00 4.61
3097 4731 2.434702 ACGAACTTCATCTATCCACCCC 59.565 50.000 0.00 0.00 0.00 4.95
3098 4732 2.545952 CGAACTTCATCTATCCACCCCG 60.546 54.545 0.00 0.00 0.00 5.73
3099 4733 0.759346 ACTTCATCTATCCACCCCGC 59.241 55.000 0.00 0.00 0.00 6.13
3100 4734 0.319900 CTTCATCTATCCACCCCGCG 60.320 60.000 0.00 0.00 0.00 6.46
3101 4735 1.754380 TTCATCTATCCACCCCGCGG 61.754 60.000 21.04 21.04 0.00 6.46
3102 4736 2.122989 ATCTATCCACCCCGCGGT 60.123 61.111 26.12 6.67 46.31 5.68
3103 4737 1.764854 ATCTATCCACCCCGCGGTT 60.765 57.895 26.12 7.69 42.04 4.44
3104 4738 0.470456 ATCTATCCACCCCGCGGTTA 60.470 55.000 26.12 4.37 42.04 2.85
3105 4739 1.068585 CTATCCACCCCGCGGTTAC 59.931 63.158 26.12 0.00 42.04 2.50
3106 4740 1.381599 TATCCACCCCGCGGTTACT 60.382 57.895 26.12 5.90 42.04 2.24
3107 4741 0.977108 TATCCACCCCGCGGTTACTT 60.977 55.000 26.12 6.68 42.04 2.24
3108 4742 2.530958 ATCCACCCCGCGGTTACTTG 62.531 60.000 26.12 12.62 42.04 3.16
3109 4743 2.344500 CACCCCGCGGTTACTTGA 59.656 61.111 26.12 0.00 42.04 3.02
3110 4744 1.301874 CACCCCGCGGTTACTTGAA 60.302 57.895 26.12 0.00 42.04 2.69
3111 4745 1.004200 ACCCCGCGGTTACTTGAAG 60.004 57.895 26.12 4.67 40.58 3.02
3112 4746 1.004200 CCCCGCGGTTACTTGAAGT 60.004 57.895 26.12 2.37 0.00 3.01
3113 4747 0.604511 CCCCGCGGTTACTTGAAGTT 60.605 55.000 26.12 0.00 0.00 2.66
3114 4748 1.232119 CCCGCGGTTACTTGAAGTTT 58.768 50.000 26.12 0.00 0.00 2.66
3115 4749 2.415776 CCCGCGGTTACTTGAAGTTTA 58.584 47.619 26.12 0.00 0.00 2.01
3116 4750 2.414138 CCCGCGGTTACTTGAAGTTTAG 59.586 50.000 26.12 0.00 0.00 1.85
3117 4751 3.062042 CCGCGGTTACTTGAAGTTTAGT 58.938 45.455 19.50 0.00 0.00 2.24
3118 4752 4.236935 CCGCGGTTACTTGAAGTTTAGTA 58.763 43.478 19.50 0.00 0.00 1.82
3119 4753 4.325472 CCGCGGTTACTTGAAGTTTAGTAG 59.675 45.833 19.50 0.00 0.00 2.57
3120 4754 4.201561 CGCGGTTACTTGAAGTTTAGTAGC 60.202 45.833 1.97 1.97 0.00 3.58
3121 4755 4.687483 GCGGTTACTTGAAGTTTAGTAGCA 59.313 41.667 1.97 0.00 31.92 3.49
3122 4756 5.178067 GCGGTTACTTGAAGTTTAGTAGCAA 59.822 40.000 1.97 0.00 31.92 3.91
3123 4757 6.128363 GCGGTTACTTGAAGTTTAGTAGCAAT 60.128 38.462 1.97 0.00 31.92 3.56
3124 4758 7.063780 GCGGTTACTTGAAGTTTAGTAGCAATA 59.936 37.037 1.97 0.00 31.92 1.90
3125 4759 8.378421 CGGTTACTTGAAGTTTAGTAGCAATAC 58.622 37.037 1.97 3.89 31.92 1.89
3126 4760 9.433153 GGTTACTTGAAGTTTAGTAGCAATACT 57.567 33.333 1.97 0.00 31.92 2.12
3136 4770 9.110502 AGTTTAGTAGCAATACTTATCAAAGCC 57.889 33.333 0.00 0.00 36.05 4.35
3137 4771 8.343366 GTTTAGTAGCAATACTTATCAAAGCCC 58.657 37.037 0.00 0.00 36.05 5.19
3138 4772 6.001449 AGTAGCAATACTTATCAAAGCCCA 57.999 37.500 0.00 0.00 36.05 5.36
3139 4773 6.423182 AGTAGCAATACTTATCAAAGCCCAA 58.577 36.000 0.00 0.00 36.05 4.12
3140 4774 7.062957 AGTAGCAATACTTATCAAAGCCCAAT 58.937 34.615 0.00 0.00 36.05 3.16
3141 4775 6.796785 AGCAATACTTATCAAAGCCCAATT 57.203 33.333 0.00 0.00 36.05 2.32
3142 4776 7.186570 AGCAATACTTATCAAAGCCCAATTT 57.813 32.000 0.00 0.00 36.05 1.82
3143 4777 7.043565 AGCAATACTTATCAAAGCCCAATTTG 58.956 34.615 0.00 0.00 40.75 2.32
3144 4778 6.818142 GCAATACTTATCAAAGCCCAATTTGT 59.182 34.615 0.00 0.00 40.36 2.83
3145 4779 7.978975 GCAATACTTATCAAAGCCCAATTTGTA 59.021 33.333 0.00 0.00 40.36 2.41
3146 4780 9.868277 CAATACTTATCAAAGCCCAATTTGTAA 57.132 29.630 0.00 0.00 40.36 2.41
3154 4788 9.791801 ATCAAAGCCCAATTTGTAAATTAAACT 57.208 25.926 2.54 0.00 40.36 2.66
3155 4789 9.620259 TCAAAGCCCAATTTGTAAATTAAACTT 57.380 25.926 2.54 4.34 40.36 2.66
3181 4815 8.801882 TTTTCCTACATAACTGGTCATTTAGG 57.198 34.615 0.00 0.00 0.00 2.69
3182 4816 5.925509 TCCTACATAACTGGTCATTTAGGC 58.074 41.667 0.00 0.00 28.66 3.93
3183 4817 5.665812 TCCTACATAACTGGTCATTTAGGCT 59.334 40.000 0.00 0.00 28.66 4.58
3184 4818 5.992217 CCTACATAACTGGTCATTTAGGCTC 59.008 44.000 0.00 0.00 0.00 4.70
3185 4819 5.435686 ACATAACTGGTCATTTAGGCTCA 57.564 39.130 0.00 0.00 0.00 4.26
3186 4820 5.186198 ACATAACTGGTCATTTAGGCTCAC 58.814 41.667 0.00 0.00 0.00 3.51
3187 4821 3.788227 AACTGGTCATTTAGGCTCACA 57.212 42.857 0.00 0.00 0.00 3.58
3188 4822 4.307032 AACTGGTCATTTAGGCTCACAT 57.693 40.909 0.00 0.00 0.00 3.21
3189 4823 4.307032 ACTGGTCATTTAGGCTCACATT 57.693 40.909 0.00 0.00 0.00 2.71
3190 4824 5.435686 ACTGGTCATTTAGGCTCACATTA 57.564 39.130 0.00 0.00 0.00 1.90
3191 4825 5.815581 ACTGGTCATTTAGGCTCACATTAA 58.184 37.500 0.00 0.00 0.00 1.40
3192 4826 5.648092 ACTGGTCATTTAGGCTCACATTAAC 59.352 40.000 0.00 0.00 0.00 2.01
3193 4827 4.634004 TGGTCATTTAGGCTCACATTAACG 59.366 41.667 0.00 0.00 0.00 3.18
3194 4828 4.634443 GGTCATTTAGGCTCACATTAACGT 59.366 41.667 0.00 0.00 0.00 3.99
3205 4839 6.639279 GGCTCACATTAACGTTAAAAACATGT 59.361 34.615 23.49 18.83 0.00 3.21
3208 4842 9.227490 CTCACATTAACGTTAAAAACATGTCAA 57.773 29.630 23.49 12.00 0.00 3.18
3210 4844 9.613153 CACATTAACGTTAAAAACATGTCAAAC 57.387 29.630 23.49 0.84 0.00 2.93
3211 4845 9.355215 ACATTAACGTTAAAAACATGTCAAACA 57.645 25.926 23.49 0.00 0.00 2.83
3226 4860 7.970061 ACATGTCAAACATAATCAACATAGCAC 59.030 33.333 0.00 0.00 36.53 4.40
3227 4861 7.446001 TGTCAAACATAATCAACATAGCACA 57.554 32.000 0.00 0.00 0.00 4.57
3229 4863 6.747280 GTCAAACATAATCAACATAGCACACC 59.253 38.462 0.00 0.00 0.00 4.16
3230 4864 6.432472 TCAAACATAATCAACATAGCACACCA 59.568 34.615 0.00 0.00 0.00 4.17
3231 4865 5.818136 ACATAATCAACATAGCACACCAC 57.182 39.130 0.00 0.00 0.00 4.16
3238 4872 1.699634 ACATAGCACACCACTCCAACT 59.300 47.619 0.00 0.00 0.00 3.16
3239 4873 2.289694 ACATAGCACACCACTCCAACTC 60.290 50.000 0.00 0.00 0.00 3.01
3240 4874 1.419381 TAGCACACCACTCCAACTCA 58.581 50.000 0.00 0.00 0.00 3.41
3241 4875 0.546122 AGCACACCACTCCAACTCAA 59.454 50.000 0.00 0.00 0.00 3.02
3242 4876 0.947244 GCACACCACTCCAACTCAAG 59.053 55.000 0.00 0.00 0.00 3.02
3243 4877 0.947244 CACACCACTCCAACTCAAGC 59.053 55.000 0.00 0.00 0.00 4.01
3244 4878 0.179018 ACACCACTCCAACTCAAGCC 60.179 55.000 0.00 0.00 0.00 4.35
3245 4879 0.890996 CACCACTCCAACTCAAGCCC 60.891 60.000 0.00 0.00 0.00 5.19
3246 4880 1.352622 ACCACTCCAACTCAAGCCCA 61.353 55.000 0.00 0.00 0.00 5.36
3247 4881 0.890996 CCACTCCAACTCAAGCCCAC 60.891 60.000 0.00 0.00 0.00 4.61
3248 4882 1.071471 ACTCCAACTCAAGCCCACG 59.929 57.895 0.00 0.00 0.00 4.94
3249 4883 1.371183 CTCCAACTCAAGCCCACGA 59.629 57.895 0.00 0.00 0.00 4.35
3250 4884 0.951040 CTCCAACTCAAGCCCACGAC 60.951 60.000 0.00 0.00 0.00 4.34
3251 4885 1.966451 CCAACTCAAGCCCACGACC 60.966 63.158 0.00 0.00 0.00 4.79
3253 4887 4.681978 ACTCAAGCCCACGACCGC 62.682 66.667 0.00 0.00 0.00 5.68
3259 4893 2.573609 AAGCCCACGACCGCTGATAC 62.574 60.000 0.00 0.00 34.94 2.24
3260 4894 2.889617 CCCACGACCGCTGATACA 59.110 61.111 0.00 0.00 0.00 2.29
3261 4895 1.216977 CCCACGACCGCTGATACAA 59.783 57.895 0.00 0.00 0.00 2.41
3262 4896 1.082117 CCCACGACCGCTGATACAAC 61.082 60.000 0.00 0.00 0.00 3.32
3263 4897 1.082117 CCACGACCGCTGATACAACC 61.082 60.000 0.00 0.00 0.00 3.77
3264 4898 0.389296 CACGACCGCTGATACAACCA 60.389 55.000 0.00 0.00 0.00 3.67
3265 4899 0.108804 ACGACCGCTGATACAACCAG 60.109 55.000 0.00 0.00 34.88 4.00
3266 4900 0.108804 CGACCGCTGATACAACCAGT 60.109 55.000 0.00 0.00 34.29 4.00
3269 4903 2.151202 ACCGCTGATACAACCAGTTTG 58.849 47.619 0.00 0.00 41.49 2.93
3271 4905 2.159627 CCGCTGATACAACCAGTTTGTC 59.840 50.000 0.00 0.00 46.05 3.18
3272 4906 2.159841 CGCTGATACAACCAGTTTGTCG 60.160 50.000 0.00 0.00 46.05 4.35
3273 4907 3.064207 GCTGATACAACCAGTTTGTCGA 58.936 45.455 0.00 0.00 46.05 4.20
3274 4908 3.123621 GCTGATACAACCAGTTTGTCGAG 59.876 47.826 0.00 0.00 46.05 4.04
3275 4909 3.659786 TGATACAACCAGTTTGTCGAGG 58.340 45.455 0.00 0.00 46.05 4.63
3277 4911 1.663695 ACAACCAGTTTGTCGAGGTG 58.336 50.000 0.00 0.00 46.05 4.00
3279 4913 0.107410 AACCAGTTTGTCGAGGTGCA 60.107 50.000 0.00 0.00 33.93 4.57
3281 4915 1.238439 CCAGTTTGTCGAGGTGCATT 58.762 50.000 0.00 0.00 0.00 3.56
3282 4916 1.608590 CCAGTTTGTCGAGGTGCATTT 59.391 47.619 0.00 0.00 0.00 2.32
3283 4917 2.034558 CCAGTTTGTCGAGGTGCATTTT 59.965 45.455 0.00 0.00 0.00 1.82
3284 4918 3.490761 CCAGTTTGTCGAGGTGCATTTTT 60.491 43.478 0.00 0.00 0.00 1.94
3305 4939 6.834959 TTTTTGCTTGATTTTATCGTTGCA 57.165 29.167 0.00 0.00 32.53 4.08
3307 4941 6.392353 TTTGCTTGATTTTATCGTTGCATG 57.608 33.333 0.00 0.00 33.73 4.06
3309 4943 5.094812 TGCTTGATTTTATCGTTGCATGAC 58.905 37.500 0.00 0.00 0.00 3.06
3310 4944 4.202959 GCTTGATTTTATCGTTGCATGACG 59.797 41.667 4.54 4.54 44.06 4.35
3318 4952 2.469826 TCGTTGCATGACGATGGTATC 58.530 47.619 9.49 0.00 46.09 2.24
3319 4953 2.159170 TCGTTGCATGACGATGGTATCA 60.159 45.455 9.49 0.00 46.09 2.15
3323 4957 2.289631 TGCATGACGATGGTATCATCCC 60.290 50.000 10.43 3.54 45.20 3.85
3324 4958 2.610433 CATGACGATGGTATCATCCCG 58.390 52.381 10.43 3.02 45.20 5.14
3326 4960 2.312390 TGACGATGGTATCATCCCGAA 58.688 47.619 10.43 0.00 45.20 4.30
3329 4963 4.525100 TGACGATGGTATCATCCCGAAATA 59.475 41.667 10.43 0.00 45.20 1.40
3330 4964 5.011227 TGACGATGGTATCATCCCGAAATAA 59.989 40.000 10.43 0.00 45.20 1.40
3331 4965 5.235516 ACGATGGTATCATCCCGAAATAAC 58.764 41.667 10.43 0.00 45.20 1.89
3333 4967 5.120208 CGATGGTATCATCCCGAAATAACAC 59.880 44.000 10.43 0.00 45.20 3.32
3335 4969 3.185797 GGTATCATCCCGAAATAACACGC 59.814 47.826 0.00 0.00 0.00 5.34
3336 4970 2.388310 TCATCCCGAAATAACACGCA 57.612 45.000 0.00 0.00 0.00 5.24
3338 4972 1.003851 ATCCCGAAATAACACGCACG 58.996 50.000 0.00 0.00 0.00 5.34
3339 4973 0.319727 TCCCGAAATAACACGCACGT 60.320 50.000 0.00 0.00 0.00 4.49
3353 4987 2.738147 CACGTGTACAGTGCTAGCC 58.262 57.895 13.29 3.49 32.52 3.93
3354 4988 0.736325 CACGTGTACAGTGCTAGCCC 60.736 60.000 13.29 0.00 32.52 5.19
3355 4989 1.183030 ACGTGTACAGTGCTAGCCCA 61.183 55.000 13.29 0.00 0.00 5.36
3356 4990 0.037697 CGTGTACAGTGCTAGCCCAA 60.038 55.000 13.29 0.00 0.00 4.12
3358 4992 0.323629 TGTACAGTGCTAGCCCAACC 59.676 55.000 13.29 0.00 0.00 3.77
3359 4993 0.323629 GTACAGTGCTAGCCCAACCA 59.676 55.000 13.29 0.00 0.00 3.67
3360 4994 1.060729 TACAGTGCTAGCCCAACCAA 58.939 50.000 13.29 0.00 0.00 3.67
3361 4995 0.184933 ACAGTGCTAGCCCAACCAAA 59.815 50.000 13.29 0.00 0.00 3.28
3362 4996 1.203050 ACAGTGCTAGCCCAACCAAAT 60.203 47.619 13.29 0.00 0.00 2.32
3363 4997 1.895131 CAGTGCTAGCCCAACCAAATT 59.105 47.619 13.29 0.00 0.00 1.82
3364 4998 2.094545 CAGTGCTAGCCCAACCAAATTC 60.095 50.000 13.29 0.00 0.00 2.17
3365 4999 2.171003 GTGCTAGCCCAACCAAATTCT 58.829 47.619 13.29 0.00 0.00 2.40
3366 5000 2.562738 GTGCTAGCCCAACCAAATTCTT 59.437 45.455 13.29 0.00 0.00 2.52
3367 5001 3.006859 GTGCTAGCCCAACCAAATTCTTT 59.993 43.478 13.29 0.00 0.00 2.52
3368 5002 3.258123 TGCTAGCCCAACCAAATTCTTTC 59.742 43.478 13.29 0.00 0.00 2.62
3369 5003 3.511540 GCTAGCCCAACCAAATTCTTTCT 59.488 43.478 2.29 0.00 0.00 2.52
3370 5004 4.705023 GCTAGCCCAACCAAATTCTTTCTA 59.295 41.667 2.29 0.00 0.00 2.10
3371 5005 5.360999 GCTAGCCCAACCAAATTCTTTCTAT 59.639 40.000 2.29 0.00 0.00 1.98
3373 5007 5.086621 AGCCCAACCAAATTCTTTCTATGT 58.913 37.500 0.00 0.00 0.00 2.29
3374 5008 6.252995 AGCCCAACCAAATTCTTTCTATGTA 58.747 36.000 0.00 0.00 0.00 2.29
3375 5009 6.723977 AGCCCAACCAAATTCTTTCTATGTAA 59.276 34.615 0.00 0.00 0.00 2.41
3377 5011 8.040727 GCCCAACCAAATTCTTTCTATGTAATT 58.959 33.333 0.00 0.00 0.00 1.40
3378 5012 9.586435 CCCAACCAAATTCTTTCTATGTAATTC 57.414 33.333 0.00 0.00 0.00 2.17
3423 5057 1.204467 TGGCTTTCCAAATCATTCGCC 59.796 47.619 0.00 0.00 39.99 5.54
3424 5058 1.204467 GGCTTTCCAAATCATTCGCCA 59.796 47.619 0.00 0.00 36.37 5.69
3426 5060 2.518949 CTTTCCAAATCATTCGCCACG 58.481 47.619 0.00 0.00 0.00 4.94
3427 5061 0.170116 TTCCAAATCATTCGCCACGC 59.830 50.000 0.00 0.00 0.00 5.34
3429 5063 1.583451 CAAATCATTCGCCACGCCG 60.583 57.895 0.00 0.00 0.00 6.46
3430 5064 1.743623 AAATCATTCGCCACGCCGA 60.744 52.632 0.00 0.00 35.09 5.54
3431 5065 1.095228 AAATCATTCGCCACGCCGAT 61.095 50.000 0.00 0.00 37.06 4.18
3432 5066 1.095228 AATCATTCGCCACGCCGATT 61.095 50.000 0.00 0.00 37.06 3.34
3433 5067 1.498865 ATCATTCGCCACGCCGATTC 61.499 55.000 0.00 0.00 37.06 2.52
3434 5068 2.173669 CATTCGCCACGCCGATTCT 61.174 57.895 0.00 0.00 37.06 2.40
3435 5069 1.449601 ATTCGCCACGCCGATTCTT 60.450 52.632 0.00 0.00 37.06 2.52
3436 5070 1.705337 ATTCGCCACGCCGATTCTTG 61.705 55.000 0.00 0.00 37.06 3.02
3437 5071 3.118454 CGCCACGCCGATTCTTGT 61.118 61.111 0.00 0.00 0.00 3.16
3438 5072 2.677003 CGCCACGCCGATTCTTGTT 61.677 57.895 0.00 0.00 0.00 2.83
3439 5073 1.579429 GCCACGCCGATTCTTGTTT 59.421 52.632 0.00 0.00 0.00 2.83
3441 5075 1.156736 CCACGCCGATTCTTGTTTCT 58.843 50.000 0.00 0.00 0.00 2.52
3443 5077 1.531149 CACGCCGATTCTTGTTTCTGT 59.469 47.619 0.00 0.00 0.00 3.41
3444 5078 1.531149 ACGCCGATTCTTGTTTCTGTG 59.469 47.619 0.00 0.00 0.00 3.66
3445 5079 1.725931 CGCCGATTCTTGTTTCTGTGC 60.726 52.381 0.00 0.00 0.00 4.57
3446 5080 1.725931 GCCGATTCTTGTTTCTGTGCG 60.726 52.381 0.00 0.00 0.00 5.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
127 131 4.340950 AGAGGCTCTGCTAGTCTTCATTAC 59.659 45.833 17.96 0.00 41.43 1.89
143 147 2.906691 ATGTAGTGCATGAGAGGCTC 57.093 50.000 6.34 6.34 36.26 4.70
178 182 9.190317 TGCTAGAATAAGTTCTGAGACTGAATA 57.810 33.333 0.00 0.00 44.27 1.75
179 183 8.072321 TGCTAGAATAAGTTCTGAGACTGAAT 57.928 34.615 0.00 0.00 44.27 2.57
180 184 7.468141 TGCTAGAATAAGTTCTGAGACTGAA 57.532 36.000 0.00 0.00 44.27 3.02
181 185 7.652524 ATGCTAGAATAAGTTCTGAGACTGA 57.347 36.000 0.00 0.00 44.27 3.41
182 186 8.715191 AAATGCTAGAATAAGTTCTGAGACTG 57.285 34.615 0.00 0.00 44.27 3.51
396 567 6.591834 ACATAAGTAGCTGTGTTTCTCATGAC 59.408 38.462 0.00 0.00 0.00 3.06
414 585 7.439108 AAGCCTCCAACTATAGAACATAAGT 57.561 36.000 6.78 0.00 0.00 2.24
421 592 5.208890 TGCTCTAAGCCTCCAACTATAGAA 58.791 41.667 6.78 0.00 41.51 2.10
422 593 4.804597 TGCTCTAAGCCTCCAACTATAGA 58.195 43.478 6.78 0.00 41.51 1.98
431 814 6.405397 GCTTCTACTATATGCTCTAAGCCTCC 60.405 46.154 0.00 0.00 41.51 4.30
452 835 1.664302 GCTCTTCAAAACCGCAGCTTC 60.664 52.381 0.00 0.00 0.00 3.86
593 1008 1.347707 TCTCTCCGGTTTTGCTGTGAT 59.652 47.619 0.00 0.00 0.00 3.06
595 1010 1.264288 GTTCTCTCCGGTTTTGCTGTG 59.736 52.381 0.00 0.00 0.00 3.66
742 1238 1.007336 GTACGTCGTTCACTGGCCAG 61.007 60.000 31.60 31.60 0.00 4.85
834 1372 1.890894 CTCGTACACCAGGACCAGG 59.109 63.158 0.33 0.33 0.00 4.45
1032 2227 1.566703 AGAACGAGGAGGAGGATGAGA 59.433 52.381 0.00 0.00 0.00 3.27
1036 2231 2.534042 TTCAGAACGAGGAGGAGGAT 57.466 50.000 0.00 0.00 0.00 3.24
1342 2757 9.060347 GGATTACAACATCACATGAGATTACAT 57.940 33.333 2.55 0.00 0.00 2.29
1356 2776 2.368439 TGCAGCAGGGATTACAACATC 58.632 47.619 0.00 0.00 0.00 3.06
1431 2868 1.384191 GTGCTTCCTCCAACCCCAT 59.616 57.895 0.00 0.00 0.00 4.00
1592 3029 0.108138 CTGTGATGGTCCCGTCCTTC 60.108 60.000 3.15 0.00 33.83 3.46
1612 3049 5.795441 GCTACGGATTGACTCAATTGTTTTC 59.205 40.000 5.13 1.43 33.90 2.29
1613 3050 5.616866 CGCTACGGATTGACTCAATTGTTTT 60.617 40.000 5.13 0.00 33.90 2.43
1628 3065 2.511600 GCCACAAGCGCTACGGAT 60.512 61.111 20.48 0.00 0.00 4.18
1691 3153 1.100510 CACTCACATCATTGGGGCTG 58.899 55.000 0.00 0.00 0.00 4.85
1710 3172 9.550811 CATGCATATATTGTGTGTTGATATGAC 57.449 33.333 0.00 0.00 33.98 3.06
1908 3380 4.840005 TGTGACGGCGTGCAACCA 62.840 61.111 21.19 5.59 0.00 3.67
1937 3409 2.163818 ATCACACGTGGTGTAGTTGG 57.836 50.000 21.57 0.00 45.65 3.77
1996 3468 9.734620 CTTCTTTGATGTCATAACTTGTTTCAA 57.265 29.630 0.00 0.00 0.00 2.69
2387 3870 1.168714 GTTTCATGACAGCCTCCCAC 58.831 55.000 0.00 0.00 0.00 4.61
2483 3972 9.685276 ATCAAATACAATCAGAAGGTTGTCATA 57.315 29.630 0.00 0.00 39.18 2.15
2747 4381 0.105039 CCGTAGAAGATGCTGACCCC 59.895 60.000 0.00 0.00 0.00 4.95
2771 4405 4.016444 TGAGTTCAAAGACAAAGCACCTT 58.984 39.130 0.00 0.00 0.00 3.50
2794 4428 3.626217 GGCAAATTTACCCTCCTTAGTCG 59.374 47.826 0.00 0.00 0.00 4.18
2827 4461 4.769215 CCGTGGTTAGAAGAAAGTTTTCG 58.231 43.478 0.00 0.00 41.92 3.46
2829 4463 3.002965 CGCCGTGGTTAGAAGAAAGTTTT 59.997 43.478 0.00 0.00 0.00 2.43
2831 4465 2.140717 CGCCGTGGTTAGAAGAAAGTT 58.859 47.619 0.00 0.00 0.00 2.66
2832 4466 1.342174 TCGCCGTGGTTAGAAGAAAGT 59.658 47.619 0.00 0.00 0.00 2.66
2833 4467 1.725164 GTCGCCGTGGTTAGAAGAAAG 59.275 52.381 0.00 0.00 0.00 2.62
2834 4468 1.606224 GGTCGCCGTGGTTAGAAGAAA 60.606 52.381 0.00 0.00 0.00 2.52
2836 4470 1.180456 TGGTCGCCGTGGTTAGAAGA 61.180 55.000 0.00 0.00 0.00 2.87
2837 4471 0.108329 ATGGTCGCCGTGGTTAGAAG 60.108 55.000 0.00 0.00 0.00 2.85
2838 4472 0.322322 AATGGTCGCCGTGGTTAGAA 59.678 50.000 0.00 0.00 0.00 2.10
2840 4474 0.390603 TCAATGGTCGCCGTGGTTAG 60.391 55.000 0.00 0.00 0.00 2.34
2842 4476 1.964373 GTCAATGGTCGCCGTGGTT 60.964 57.895 0.00 0.00 0.00 3.67
2843 4477 2.358247 GTCAATGGTCGCCGTGGT 60.358 61.111 0.00 0.00 0.00 4.16
2844 4478 3.124921 GGTCAATGGTCGCCGTGG 61.125 66.667 0.00 0.00 0.00 4.94
2846 4480 1.827399 AAGAGGTCAATGGTCGCCGT 61.827 55.000 0.00 0.00 0.00 5.68
2847 4481 0.673644 AAAGAGGTCAATGGTCGCCG 60.674 55.000 0.00 0.00 0.00 6.46
2848 4482 2.396590 TAAAGAGGTCAATGGTCGCC 57.603 50.000 0.00 0.00 0.00 5.54
2849 4483 3.557595 CAGATAAAGAGGTCAATGGTCGC 59.442 47.826 0.00 0.00 0.00 5.19
2850 4484 4.122776 CCAGATAAAGAGGTCAATGGTCG 58.877 47.826 0.00 0.00 0.00 4.79
2851 4485 5.119694 GTCCAGATAAAGAGGTCAATGGTC 58.880 45.833 0.00 0.00 0.00 4.02
2853 4487 4.164988 AGGTCCAGATAAAGAGGTCAATGG 59.835 45.833 0.00 0.00 0.00 3.16
2854 4488 5.365021 AGGTCCAGATAAAGAGGTCAATG 57.635 43.478 0.00 0.00 0.00 2.82
2855 4489 6.394345 AAAGGTCCAGATAAAGAGGTCAAT 57.606 37.500 0.00 0.00 0.00 2.57
2857 4491 5.560724 CAAAAGGTCCAGATAAAGAGGTCA 58.439 41.667 0.00 0.00 0.00 4.02
2859 4493 4.202567 TGCAAAAGGTCCAGATAAAGAGGT 60.203 41.667 0.00 0.00 0.00 3.85
2860 4494 4.335416 TGCAAAAGGTCCAGATAAAGAGG 58.665 43.478 0.00 0.00 0.00 3.69
2861 4495 5.416952 ACATGCAAAAGGTCCAGATAAAGAG 59.583 40.000 0.00 0.00 0.00 2.85
2862 4496 5.324409 ACATGCAAAAGGTCCAGATAAAGA 58.676 37.500 0.00 0.00 0.00 2.52
2864 4498 5.324409 AGACATGCAAAAGGTCCAGATAAA 58.676 37.500 0.00 0.00 40.55 1.40
2865 4499 4.922206 AGACATGCAAAAGGTCCAGATAA 58.078 39.130 0.00 0.00 40.55 1.75
2867 4501 3.446442 AGACATGCAAAAGGTCCAGAT 57.554 42.857 0.00 0.00 40.55 2.90
2868 4502 2.957402 AGACATGCAAAAGGTCCAGA 57.043 45.000 0.00 0.00 40.55 3.86
2869 4503 4.082571 CCTAAAGACATGCAAAAGGTCCAG 60.083 45.833 0.00 0.00 40.55 3.86
2870 4504 3.826157 CCTAAAGACATGCAAAAGGTCCA 59.174 43.478 0.00 0.00 40.55 4.02
2871 4505 4.079253 TCCTAAAGACATGCAAAAGGTCC 58.921 43.478 0.00 0.00 40.55 4.46
2872 4506 5.904362 ATCCTAAAGACATGCAAAAGGTC 57.096 39.130 0.00 0.00 39.95 3.85
2876 4510 4.282957 TGGCAATCCTAAAGACATGCAAAA 59.717 37.500 0.00 0.00 40.69 2.44
2877 4511 3.831333 TGGCAATCCTAAAGACATGCAAA 59.169 39.130 0.00 0.00 40.69 3.68
2878 4512 3.193267 GTGGCAATCCTAAAGACATGCAA 59.807 43.478 0.00 0.00 40.69 4.08
2880 4514 2.223340 CGTGGCAATCCTAAAGACATGC 60.223 50.000 0.00 0.00 39.06 4.06
2881 4515 3.009723 ACGTGGCAATCCTAAAGACATG 58.990 45.455 0.00 0.00 0.00 3.21
2883 4517 2.614481 GGACGTGGCAATCCTAAAGACA 60.614 50.000 11.01 0.00 31.75 3.41
2884 4518 2.007608 GGACGTGGCAATCCTAAAGAC 58.992 52.381 11.01 0.00 31.75 3.01
2885 4519 1.065709 GGGACGTGGCAATCCTAAAGA 60.066 52.381 16.37 0.00 35.15 2.52
2886 4520 1.339631 TGGGACGTGGCAATCCTAAAG 60.340 52.381 16.37 0.00 35.15 1.85
2888 4522 0.916086 ATGGGACGTGGCAATCCTAA 59.084 50.000 16.37 7.83 35.15 2.69
2889 4523 0.916086 AATGGGACGTGGCAATCCTA 59.084 50.000 16.37 12.14 35.15 2.94
2890 4524 0.680921 CAATGGGACGTGGCAATCCT 60.681 55.000 16.37 0.00 35.15 3.24
2893 4527 1.477700 CAATCAATGGGACGTGGCAAT 59.522 47.619 0.00 0.00 0.00 3.56
2895 4529 1.594194 GCAATCAATGGGACGTGGCA 61.594 55.000 0.00 0.00 0.00 4.92
2896 4530 1.139520 GCAATCAATGGGACGTGGC 59.860 57.895 0.00 0.00 0.00 5.01
2897 4531 1.305219 ACGCAATCAATGGGACGTGG 61.305 55.000 0.00 0.00 44.39 4.94
2898 4532 0.096976 GACGCAATCAATGGGACGTG 59.903 55.000 0.00 0.00 44.39 4.49
2899 4533 0.036388 AGACGCAATCAATGGGACGT 60.036 50.000 0.00 0.00 44.39 4.34
2900 4534 0.374758 CAGACGCAATCAATGGGACG 59.625 55.000 0.00 0.00 44.39 4.79
2901 4535 0.734889 CCAGACGCAATCAATGGGAC 59.265 55.000 0.00 0.00 44.39 4.46
2902 4536 0.327924 ACCAGACGCAATCAATGGGA 59.672 50.000 0.00 0.00 44.39 4.37
2903 4537 2.036958 TACCAGACGCAATCAATGGG 57.963 50.000 0.00 0.00 46.83 4.00
2904 4538 3.187227 GCTATACCAGACGCAATCAATGG 59.813 47.826 0.00 0.00 37.07 3.16
2905 4539 4.060900 AGCTATACCAGACGCAATCAATG 58.939 43.478 0.00 0.00 0.00 2.82
2906 4540 4.342862 AGCTATACCAGACGCAATCAAT 57.657 40.909 0.00 0.00 0.00 2.57
2907 4541 3.819564 AGCTATACCAGACGCAATCAA 57.180 42.857 0.00 0.00 0.00 2.57
2908 4542 4.767409 AGATAGCTATACCAGACGCAATCA 59.233 41.667 6.13 0.00 0.00 2.57
2909 4543 5.106118 TGAGATAGCTATACCAGACGCAATC 60.106 44.000 6.13 0.00 0.00 2.67
2910 4544 4.767409 TGAGATAGCTATACCAGACGCAAT 59.233 41.667 6.13 0.00 0.00 3.56
2911 4545 4.142038 TGAGATAGCTATACCAGACGCAA 58.858 43.478 6.13 0.00 0.00 4.85
2912 4546 3.751518 TGAGATAGCTATACCAGACGCA 58.248 45.455 6.13 0.00 0.00 5.24
2913 4547 4.974368 ATGAGATAGCTATACCAGACGC 57.026 45.455 6.13 0.00 0.00 5.19
2914 4548 6.682746 ACAAATGAGATAGCTATACCAGACG 58.317 40.000 6.13 3.22 0.00 4.18
2925 4559 9.294030 CCAGTTTTTGAATACAAATGAGATAGC 57.706 33.333 0.00 0.00 43.99 2.97
2934 4568 9.921637 GGATGAATACCAGTTTTTGAATACAAA 57.078 29.630 0.00 0.00 43.10 2.83
2935 4569 9.308000 AGGATGAATACCAGTTTTTGAATACAA 57.692 29.630 0.00 0.00 0.00 2.41
2936 4570 8.877864 AGGATGAATACCAGTTTTTGAATACA 57.122 30.769 0.00 0.00 0.00 2.29
2937 4571 9.178758 AGAGGATGAATACCAGTTTTTGAATAC 57.821 33.333 0.00 0.00 0.00 1.89
2939 4573 9.927081 ATAGAGGATGAATACCAGTTTTTGAAT 57.073 29.630 0.00 0.00 0.00 2.57
2940 4574 9.177608 CATAGAGGATGAATACCAGTTTTTGAA 57.822 33.333 0.00 0.00 37.82 2.69
2941 4575 8.328758 ACATAGAGGATGAATACCAGTTTTTGA 58.671 33.333 0.00 0.00 39.06 2.69
2942 4576 8.511604 ACATAGAGGATGAATACCAGTTTTTG 57.488 34.615 0.00 0.00 39.06 2.44
2943 4577 7.775561 GGACATAGAGGATGAATACCAGTTTTT 59.224 37.037 0.00 0.00 39.06 1.94
2944 4578 7.092444 TGGACATAGAGGATGAATACCAGTTTT 60.092 37.037 0.00 0.00 39.06 2.43
2945 4579 6.386927 TGGACATAGAGGATGAATACCAGTTT 59.613 38.462 0.00 0.00 39.06 2.66
2946 4580 5.905331 TGGACATAGAGGATGAATACCAGTT 59.095 40.000 0.00 0.00 39.06 3.16
2947 4581 5.467738 TGGACATAGAGGATGAATACCAGT 58.532 41.667 0.00 0.00 39.06 4.00
2948 4582 6.013898 ACATGGACATAGAGGATGAATACCAG 60.014 42.308 0.00 0.00 39.06 4.00
2949 4583 5.846164 ACATGGACATAGAGGATGAATACCA 59.154 40.000 0.00 0.00 39.06 3.25
2950 4584 6.365970 ACATGGACATAGAGGATGAATACC 57.634 41.667 0.00 0.00 39.06 2.73
2951 4585 7.601886 CAGAACATGGACATAGAGGATGAATAC 59.398 40.741 0.00 0.00 39.06 1.89
2952 4586 7.674120 CAGAACATGGACATAGAGGATGAATA 58.326 38.462 0.00 0.00 39.06 1.75
2953 4587 6.531923 CAGAACATGGACATAGAGGATGAAT 58.468 40.000 0.00 0.00 39.06 2.57
2954 4588 5.922053 CAGAACATGGACATAGAGGATGAA 58.078 41.667 0.00 0.00 39.06 2.57
2955 4589 5.541953 CAGAACATGGACATAGAGGATGA 57.458 43.478 0.00 0.00 39.06 2.92
2966 4600 8.384104 AAGAAGAACTTGTACCAGAACATGGAC 61.384 40.741 0.08 0.00 43.90 4.02
2967 4601 6.409234 AAGAAGAACTTGTACCAGAACATGGA 60.409 38.462 0.08 0.00 43.90 3.41
2968 4602 5.765182 AAGAAGAACTTGTACCAGAACATGG 59.235 40.000 0.08 0.00 45.39 3.66
2969 4603 6.867662 AAGAAGAACTTGTACCAGAACATG 57.132 37.500 0.08 0.00 37.45 3.21
2970 4604 7.054124 TGAAAGAAGAACTTGTACCAGAACAT 58.946 34.615 0.08 0.00 38.98 2.71
2971 4605 6.411376 TGAAAGAAGAACTTGTACCAGAACA 58.589 36.000 0.08 0.00 38.98 3.18
2972 4606 6.920569 TGAAAGAAGAACTTGTACCAGAAC 57.079 37.500 0.08 0.00 38.98 3.01
2973 4607 8.519799 AAATGAAAGAAGAACTTGTACCAGAA 57.480 30.769 0.08 0.00 38.98 3.02
2974 4608 9.052759 GTAAATGAAAGAAGAACTTGTACCAGA 57.947 33.333 0.08 0.00 38.98 3.86
2975 4609 9.057089 AGTAAATGAAAGAAGAACTTGTACCAG 57.943 33.333 0.00 0.00 38.98 4.00
2976 4610 8.836413 CAGTAAATGAAAGAAGAACTTGTACCA 58.164 33.333 0.00 0.00 38.98 3.25
2977 4611 8.837389 ACAGTAAATGAAAGAAGAACTTGTACC 58.163 33.333 0.00 0.00 38.98 3.34
3005 4639 9.645059 GCAAGACTTGATACATGAAGCTATATA 57.355 33.333 19.51 0.00 0.00 0.86
3006 4640 8.373981 AGCAAGACTTGATACATGAAGCTATAT 58.626 33.333 19.51 0.00 0.00 0.86
3007 4641 7.730084 AGCAAGACTTGATACATGAAGCTATA 58.270 34.615 19.51 0.00 0.00 1.31
3008 4642 6.590068 AGCAAGACTTGATACATGAAGCTAT 58.410 36.000 19.51 0.00 0.00 2.97
3009 4643 5.982356 AGCAAGACTTGATACATGAAGCTA 58.018 37.500 19.51 0.00 0.00 3.32
3010 4644 4.841422 AGCAAGACTTGATACATGAAGCT 58.159 39.130 19.51 1.53 0.00 3.74
3011 4645 4.034975 GGAGCAAGACTTGATACATGAAGC 59.965 45.833 19.51 0.00 28.07 3.86
3012 4646 4.574013 GGGAGCAAGACTTGATACATGAAG 59.426 45.833 19.51 0.00 29.42 3.02
3013 4647 4.517285 GGGAGCAAGACTTGATACATGAA 58.483 43.478 19.51 0.00 29.42 2.57
3014 4648 3.430790 CGGGAGCAAGACTTGATACATGA 60.431 47.826 19.51 0.00 29.42 3.07
3015 4649 2.868583 CGGGAGCAAGACTTGATACATG 59.131 50.000 19.51 6.09 29.42 3.21
3016 4650 2.158900 CCGGGAGCAAGACTTGATACAT 60.159 50.000 19.51 0.00 29.42 2.29
3017 4651 1.207089 CCGGGAGCAAGACTTGATACA 59.793 52.381 19.51 0.00 29.42 2.29
3018 4652 1.207329 ACCGGGAGCAAGACTTGATAC 59.793 52.381 19.51 13.50 0.00 2.24
3019 4653 1.480954 GACCGGGAGCAAGACTTGATA 59.519 52.381 19.51 0.00 0.00 2.15
3020 4654 0.250513 GACCGGGAGCAAGACTTGAT 59.749 55.000 19.51 13.11 0.00 2.57
3021 4655 1.671742 GACCGGGAGCAAGACTTGA 59.328 57.895 19.51 0.00 0.00 3.02
3022 4656 1.376037 GGACCGGGAGCAAGACTTG 60.376 63.158 11.02 11.02 0.00 3.16
3023 4657 1.201429 ATGGACCGGGAGCAAGACTT 61.201 55.000 6.32 0.00 0.00 3.01
3024 4658 1.613630 ATGGACCGGGAGCAAGACT 60.614 57.895 6.32 0.00 0.00 3.24
3025 4659 1.450312 CATGGACCGGGAGCAAGAC 60.450 63.158 6.32 0.00 0.00 3.01
3026 4660 2.669133 CCATGGACCGGGAGCAAGA 61.669 63.158 5.56 0.00 0.00 3.02
3027 4661 2.124570 CCATGGACCGGGAGCAAG 60.125 66.667 5.56 0.00 0.00 4.01
3028 4662 4.424711 GCCATGGACCGGGAGCAA 62.425 66.667 18.40 0.00 0.00 3.91
3030 4664 4.864334 CTGCCATGGACCGGGAGC 62.864 72.222 18.40 0.00 35.01 4.70
3031 4665 4.864334 GCTGCCATGGACCGGGAG 62.864 72.222 18.40 0.00 44.36 4.30
3033 4667 4.864334 GAGCTGCCATGGACCGGG 62.864 72.222 18.40 0.58 0.00 5.73
3034 4668 4.100084 TGAGCTGCCATGGACCGG 62.100 66.667 18.40 0.00 0.00 5.28
3035 4669 2.821366 GTGAGCTGCCATGGACCG 60.821 66.667 18.40 4.54 0.00 4.79
3036 4670 2.042831 GTGTGAGCTGCCATGGACC 61.043 63.158 18.40 1.84 0.00 4.46
3037 4671 1.302752 TGTGTGAGCTGCCATGGAC 60.303 57.895 18.40 7.64 0.00 4.02
3038 4672 1.302752 GTGTGTGAGCTGCCATGGA 60.303 57.895 18.40 0.00 0.00 3.41
3039 4673 2.683859 CGTGTGTGAGCTGCCATGG 61.684 63.158 7.63 7.63 0.00 3.66
3040 4674 1.022982 ATCGTGTGTGAGCTGCCATG 61.023 55.000 0.00 0.00 0.00 3.66
3041 4675 1.022982 CATCGTGTGTGAGCTGCCAT 61.023 55.000 0.00 0.00 0.00 4.40
3042 4676 1.668793 CATCGTGTGTGAGCTGCCA 60.669 57.895 0.00 0.00 0.00 4.92
3043 4677 3.031964 GCATCGTGTGTGAGCTGCC 62.032 63.158 0.00 0.00 0.00 4.85
3044 4678 2.477845 GCATCGTGTGTGAGCTGC 59.522 61.111 0.00 0.00 0.00 5.25
3045 4679 2.774126 CGCATCGTGTGTGAGCTG 59.226 61.111 0.00 0.00 40.86 4.24
3046 4680 3.114616 GCGCATCGTGTGTGAGCT 61.115 61.111 0.30 0.00 40.86 4.09
3047 4681 4.489795 CGCGCATCGTGTGTGAGC 62.490 66.667 8.75 4.09 40.52 4.26
3048 4682 4.489795 GCGCGCATCGTGTGTGAG 62.490 66.667 29.10 9.06 40.52 3.51
3053 4687 4.522689 TATGGGCGCGCATCGTGT 62.523 61.111 38.78 21.47 39.70 4.49
3054 4688 4.000557 GTATGGGCGCGCATCGTG 62.001 66.667 38.78 0.00 41.07 4.35
3056 4690 4.969196 AGGTATGGGCGCGCATCG 62.969 66.667 38.78 0.00 42.12 3.84
3057 4691 3.349006 CAGGTATGGGCGCGCATC 61.349 66.667 38.78 28.32 0.00 3.91
3058 4692 4.935495 CCAGGTATGGGCGCGCAT 62.935 66.667 37.12 37.12 43.54 4.73
3067 4701 4.392921 AGATGAAGTTCGTCCAGGTATG 57.607 45.455 19.37 0.00 32.93 2.39
3068 4702 5.244178 GGATAGATGAAGTTCGTCCAGGTAT 59.756 44.000 19.37 11.55 32.93 2.73
3069 4703 4.583489 GGATAGATGAAGTTCGTCCAGGTA 59.417 45.833 19.37 7.64 32.93 3.08
3070 4704 3.385111 GGATAGATGAAGTTCGTCCAGGT 59.615 47.826 19.37 5.77 32.93 4.00
3071 4705 3.384789 TGGATAGATGAAGTTCGTCCAGG 59.615 47.826 19.37 0.00 32.93 4.45
3072 4706 4.363999 GTGGATAGATGAAGTTCGTCCAG 58.636 47.826 19.37 0.00 36.57 3.86
3073 4707 3.132289 GGTGGATAGATGAAGTTCGTCCA 59.868 47.826 19.37 13.41 32.93 4.02
3074 4708 3.492829 GGGTGGATAGATGAAGTTCGTCC 60.493 52.174 19.37 11.34 32.93 4.79
3075 4709 3.492829 GGGGTGGATAGATGAAGTTCGTC 60.493 52.174 16.02 16.02 32.67 4.20
3076 4710 2.434702 GGGGTGGATAGATGAAGTTCGT 59.565 50.000 0.00 0.00 0.00 3.85
3077 4711 2.545952 CGGGGTGGATAGATGAAGTTCG 60.546 54.545 0.00 0.00 0.00 3.95
3078 4712 2.807108 GCGGGGTGGATAGATGAAGTTC 60.807 54.545 0.00 0.00 0.00 3.01
3079 4713 1.141053 GCGGGGTGGATAGATGAAGTT 59.859 52.381 0.00 0.00 0.00 2.66
3080 4714 0.759346 GCGGGGTGGATAGATGAAGT 59.241 55.000 0.00 0.00 0.00 3.01
3081 4715 0.319900 CGCGGGGTGGATAGATGAAG 60.320 60.000 0.00 0.00 0.00 3.02
3082 4716 1.745890 CGCGGGGTGGATAGATGAA 59.254 57.895 0.00 0.00 0.00 2.57
3083 4717 2.207229 CCGCGGGGTGGATAGATGA 61.207 63.158 20.10 0.00 34.74 2.92
3084 4718 2.343758 CCGCGGGGTGGATAGATG 59.656 66.667 20.10 0.00 34.74 2.90
3094 4728 0.604511 AACTTCAAGTAACCGCGGGG 60.605 55.000 31.76 18.33 40.11 5.73
3095 4729 1.232119 AAACTTCAAGTAACCGCGGG 58.768 50.000 31.76 10.66 0.00 6.13
3096 4730 3.062042 ACTAAACTTCAAGTAACCGCGG 58.938 45.455 26.86 26.86 0.00 6.46
3097 4731 4.201561 GCTACTAAACTTCAAGTAACCGCG 60.202 45.833 0.00 0.00 0.00 6.46
3098 4732 4.687483 TGCTACTAAACTTCAAGTAACCGC 59.313 41.667 0.00 0.00 0.00 5.68
3099 4733 6.774354 TTGCTACTAAACTTCAAGTAACCG 57.226 37.500 0.00 0.00 0.00 4.44
3100 4734 9.433153 AGTATTGCTACTAAACTTCAAGTAACC 57.567 33.333 0.00 0.00 36.40 2.85
3110 4744 9.110502 GGCTTTGATAAGTATTGCTACTAAACT 57.889 33.333 0.00 0.00 37.20 2.66
3111 4745 8.343366 GGGCTTTGATAAGTATTGCTACTAAAC 58.657 37.037 0.00 0.00 37.20 2.01
3112 4746 8.050325 TGGGCTTTGATAAGTATTGCTACTAAA 58.950 33.333 0.00 0.00 37.20 1.85
3113 4747 7.570132 TGGGCTTTGATAAGTATTGCTACTAA 58.430 34.615 0.00 0.00 37.20 2.24
3114 4748 7.131907 TGGGCTTTGATAAGTATTGCTACTA 57.868 36.000 0.00 0.00 37.20 1.82
3115 4749 6.001449 TGGGCTTTGATAAGTATTGCTACT 57.999 37.500 0.00 0.00 39.97 2.57
3116 4750 6.693315 TTGGGCTTTGATAAGTATTGCTAC 57.307 37.500 0.00 0.00 33.74 3.58
3117 4751 7.896383 AATTGGGCTTTGATAAGTATTGCTA 57.104 32.000 0.00 0.00 33.74 3.49
3118 4752 6.796785 AATTGGGCTTTGATAAGTATTGCT 57.203 33.333 0.00 0.00 33.74 3.91
3119 4753 6.818142 ACAAATTGGGCTTTGATAAGTATTGC 59.182 34.615 4.89 0.00 38.17 3.56
3120 4754 9.868277 TTACAAATTGGGCTTTGATAAGTATTG 57.132 29.630 4.89 0.00 38.17 1.90
3128 4762 9.791801 AGTTTAATTTACAAATTGGGCTTTGAT 57.208 25.926 9.64 0.00 38.90 2.57
3129 4763 9.620259 AAGTTTAATTTACAAATTGGGCTTTGA 57.380 25.926 9.64 0.00 38.90 2.69
3155 4789 9.238368 CCTAAATGACCAGTTATGTAGGAAAAA 57.762 33.333 11.65 0.00 38.27 1.94
3156 4790 7.338449 GCCTAAATGACCAGTTATGTAGGAAAA 59.662 37.037 18.50 0.00 38.27 2.29
3157 4791 6.826741 GCCTAAATGACCAGTTATGTAGGAAA 59.173 38.462 18.50 0.00 38.27 3.13
3158 4792 6.157994 AGCCTAAATGACCAGTTATGTAGGAA 59.842 38.462 18.50 0.00 38.27 3.36
3159 4793 5.665812 AGCCTAAATGACCAGTTATGTAGGA 59.334 40.000 18.50 0.00 38.27 2.94
3160 4794 5.930135 AGCCTAAATGACCAGTTATGTAGG 58.070 41.667 12.43 12.43 38.75 3.18
3161 4795 6.480320 GTGAGCCTAAATGACCAGTTATGTAG 59.520 42.308 0.00 0.00 0.00 2.74
3162 4796 6.070481 TGTGAGCCTAAATGACCAGTTATGTA 60.070 38.462 0.00 0.00 0.00 2.29
3163 4797 5.186198 GTGAGCCTAAATGACCAGTTATGT 58.814 41.667 0.00 0.00 0.00 2.29
3164 4798 5.185454 TGTGAGCCTAAATGACCAGTTATG 58.815 41.667 0.00 0.00 0.00 1.90
3165 4799 5.435686 TGTGAGCCTAAATGACCAGTTAT 57.564 39.130 0.00 0.00 0.00 1.89
3166 4800 4.901197 TGTGAGCCTAAATGACCAGTTA 57.099 40.909 0.00 0.00 0.00 2.24
3167 4801 3.788227 TGTGAGCCTAAATGACCAGTT 57.212 42.857 0.00 0.00 0.00 3.16
3168 4802 4.307032 AATGTGAGCCTAAATGACCAGT 57.693 40.909 0.00 0.00 0.00 4.00
3169 4803 5.220662 CGTTAATGTGAGCCTAAATGACCAG 60.221 44.000 0.00 0.00 0.00 4.00
3170 4804 4.634004 CGTTAATGTGAGCCTAAATGACCA 59.366 41.667 0.00 0.00 0.00 4.02
3171 4805 4.634443 ACGTTAATGTGAGCCTAAATGACC 59.366 41.667 0.00 0.00 0.00 4.02
3172 4806 5.796350 ACGTTAATGTGAGCCTAAATGAC 57.204 39.130 0.00 0.00 0.00 3.06
3173 4807 7.908827 TTAACGTTAATGTGAGCCTAAATGA 57.091 32.000 16.59 0.00 0.00 2.57
3174 4808 8.958175 TTTTAACGTTAATGTGAGCCTAAATG 57.042 30.769 20.72 0.00 0.00 2.32
3175 4809 9.401873 GTTTTTAACGTTAATGTGAGCCTAAAT 57.598 29.630 20.72 0.00 0.00 1.40
3176 4810 8.404000 TGTTTTTAACGTTAATGTGAGCCTAAA 58.596 29.630 20.72 11.91 0.00 1.85
3177 4811 7.928103 TGTTTTTAACGTTAATGTGAGCCTAA 58.072 30.769 20.72 6.74 0.00 2.69
3178 4812 7.493743 TGTTTTTAACGTTAATGTGAGCCTA 57.506 32.000 20.72 0.59 0.00 3.93
3179 4813 6.380095 TGTTTTTAACGTTAATGTGAGCCT 57.620 33.333 20.72 0.00 0.00 4.58
3180 4814 6.639279 ACATGTTTTTAACGTTAATGTGAGCC 59.361 34.615 20.72 6.52 0.00 4.70
3181 4815 7.377397 TGACATGTTTTTAACGTTAATGTGAGC 59.623 33.333 22.33 12.50 28.23 4.26
3182 4816 8.775220 TGACATGTTTTTAACGTTAATGTGAG 57.225 30.769 22.33 13.82 28.23 3.51
3183 4817 9.569167 TTTGACATGTTTTTAACGTTAATGTGA 57.431 25.926 22.33 14.82 28.23 3.58
3184 4818 9.613153 GTTTGACATGTTTTTAACGTTAATGTG 57.387 29.630 22.33 17.14 28.23 3.21
3185 4819 9.355215 TGTTTGACATGTTTTTAACGTTAATGT 57.645 25.926 20.72 19.78 30.01 2.71
3191 4825 9.737427 TGATTATGTTTGACATGTTTTTAACGT 57.263 25.926 0.00 6.55 39.53 3.99
3205 4839 6.432472 TGGTGTGCTATGTTGATTATGTTTGA 59.568 34.615 0.00 0.00 0.00 2.69
3208 4842 5.945784 AGTGGTGTGCTATGTTGATTATGTT 59.054 36.000 0.00 0.00 0.00 2.71
3210 4844 5.008019 GGAGTGGTGTGCTATGTTGATTATG 59.992 44.000 0.00 0.00 0.00 1.90
3211 4845 5.126067 GGAGTGGTGTGCTATGTTGATTAT 58.874 41.667 0.00 0.00 0.00 1.28
3213 4847 3.244875 TGGAGTGGTGTGCTATGTTGATT 60.245 43.478 0.00 0.00 0.00 2.57
3214 4848 2.305635 TGGAGTGGTGTGCTATGTTGAT 59.694 45.455 0.00 0.00 0.00 2.57
3215 4849 1.696884 TGGAGTGGTGTGCTATGTTGA 59.303 47.619 0.00 0.00 0.00 3.18
3216 4850 2.183478 TGGAGTGGTGTGCTATGTTG 57.817 50.000 0.00 0.00 0.00 3.33
3218 4852 1.699634 AGTTGGAGTGGTGTGCTATGT 59.300 47.619 0.00 0.00 0.00 2.29
3220 4854 1.977854 TGAGTTGGAGTGGTGTGCTAT 59.022 47.619 0.00 0.00 0.00 2.97
3221 4855 1.419381 TGAGTTGGAGTGGTGTGCTA 58.581 50.000 0.00 0.00 0.00 3.49
3222 4856 0.546122 TTGAGTTGGAGTGGTGTGCT 59.454 50.000 0.00 0.00 0.00 4.40
3226 4860 0.890996 GGGCTTGAGTTGGAGTGGTG 60.891 60.000 0.00 0.00 0.00 4.17
3227 4861 1.352622 TGGGCTTGAGTTGGAGTGGT 61.353 55.000 0.00 0.00 0.00 4.16
3229 4863 1.230635 CGTGGGCTTGAGTTGGAGTG 61.231 60.000 0.00 0.00 0.00 3.51
3230 4864 1.071471 CGTGGGCTTGAGTTGGAGT 59.929 57.895 0.00 0.00 0.00 3.85
3231 4865 0.951040 GTCGTGGGCTTGAGTTGGAG 60.951 60.000 0.00 0.00 0.00 3.86
3238 4872 4.680237 CAGCGGTCGTGGGCTTGA 62.680 66.667 0.00 0.00 37.41 3.02
3239 4873 2.572095 TATCAGCGGTCGTGGGCTTG 62.572 60.000 0.00 0.00 37.41 4.01
3240 4874 2.355986 TATCAGCGGTCGTGGGCTT 61.356 57.895 0.00 0.00 37.41 4.35
3241 4875 2.758327 TATCAGCGGTCGTGGGCT 60.758 61.111 0.00 0.00 40.90 5.19
3242 4876 2.585247 GTATCAGCGGTCGTGGGC 60.585 66.667 0.00 0.00 0.00 5.36
3243 4877 1.082117 GTTGTATCAGCGGTCGTGGG 61.082 60.000 0.00 0.00 0.00 4.61
3244 4878 1.082117 GGTTGTATCAGCGGTCGTGG 61.082 60.000 0.00 0.00 0.00 4.94
3245 4879 0.389296 TGGTTGTATCAGCGGTCGTG 60.389 55.000 0.00 0.00 0.00 4.35
3246 4880 0.108804 CTGGTTGTATCAGCGGTCGT 60.109 55.000 0.00 0.00 0.00 4.34
3247 4881 0.108804 ACTGGTTGTATCAGCGGTCG 60.109 55.000 0.00 0.00 35.78 4.79
3248 4882 2.094762 AACTGGTTGTATCAGCGGTC 57.905 50.000 0.00 0.00 35.78 4.79
3249 4883 2.151202 CAAACTGGTTGTATCAGCGGT 58.849 47.619 0.00 0.00 35.78 5.68
3250 4884 2.900122 CAAACTGGTTGTATCAGCGG 57.100 50.000 0.00 0.00 35.78 5.52
3259 4893 0.307760 GCACCTCGACAAACTGGTTG 59.692 55.000 3.41 3.41 43.43 3.77
3260 4894 0.107410 TGCACCTCGACAAACTGGTT 60.107 50.000 0.00 0.00 0.00 3.67
3261 4895 0.108585 ATGCACCTCGACAAACTGGT 59.891 50.000 0.00 0.00 0.00 4.00
3262 4896 1.238439 AATGCACCTCGACAAACTGG 58.762 50.000 0.00 0.00 0.00 4.00
3263 4897 3.354089 AAAATGCACCTCGACAAACTG 57.646 42.857 0.00 0.00 0.00 3.16
3282 4916 6.834959 TGCAACGATAAAATCAAGCAAAAA 57.165 29.167 0.00 0.00 30.51 1.94
3283 4917 6.644181 TCATGCAACGATAAAATCAAGCAAAA 59.356 30.769 0.00 0.00 34.94 2.44
3284 4918 6.089283 GTCATGCAACGATAAAATCAAGCAAA 59.911 34.615 0.00 0.00 34.94 3.68
3285 4919 5.572511 GTCATGCAACGATAAAATCAAGCAA 59.427 36.000 0.00 0.00 34.94 3.91
3287 4921 4.202959 CGTCATGCAACGATAAAATCAAGC 59.797 41.667 4.95 0.00 45.37 4.01
3289 4923 5.538067 TCGTCATGCAACGATAAAATCAA 57.462 34.783 9.49 0.00 46.02 2.57
3299 4933 2.200899 TGATACCATCGTCATGCAACG 58.799 47.619 4.54 4.54 43.92 4.10
3310 4944 5.120208 CGTGTTATTTCGGGATGATACCATC 59.880 44.000 0.00 0.00 46.50 3.51
3311 4945 4.994852 CGTGTTATTTCGGGATGATACCAT 59.005 41.667 0.00 0.00 35.29 3.55
3313 4947 3.185797 GCGTGTTATTTCGGGATGATACC 59.814 47.826 0.00 0.00 0.00 2.73
3314 4948 3.805422 TGCGTGTTATTTCGGGATGATAC 59.195 43.478 0.00 0.00 0.00 2.24
3315 4949 3.805422 GTGCGTGTTATTTCGGGATGATA 59.195 43.478 0.00 0.00 0.00 2.15
3316 4950 2.612212 GTGCGTGTTATTTCGGGATGAT 59.388 45.455 0.00 0.00 0.00 2.45
3318 4952 1.267334 CGTGCGTGTTATTTCGGGATG 60.267 52.381 0.00 0.00 0.00 3.51
3319 4953 1.003851 CGTGCGTGTTATTTCGGGAT 58.996 50.000 0.00 0.00 0.00 3.85
3331 4965 2.544359 GCACTGTACACGTGCGTG 59.456 61.111 24.58 21.14 46.81 5.34
3335 4969 0.736325 GGGCTAGCACTGTACACGTG 60.736 60.000 18.24 15.48 35.53 4.49
3336 4970 1.183030 TGGGCTAGCACTGTACACGT 61.183 55.000 19.73 0.00 0.00 4.49
3338 4972 1.439679 GTTGGGCTAGCACTGTACAC 58.560 55.000 19.73 3.43 0.00 2.90
3339 4973 0.323629 GGTTGGGCTAGCACTGTACA 59.676 55.000 19.73 3.06 0.00 2.90
3340 4974 0.323629 TGGTTGGGCTAGCACTGTAC 59.676 55.000 19.73 13.07 0.00 2.90
3341 4975 1.060729 TTGGTTGGGCTAGCACTGTA 58.939 50.000 19.73 0.26 0.00 2.74
3344 4978 2.171003 GAATTTGGTTGGGCTAGCACT 58.829 47.619 19.73 0.00 0.00 4.40
3345 4979 2.171003 AGAATTTGGTTGGGCTAGCAC 58.829 47.619 18.24 14.86 0.00 4.40
3346 4980 2.603075 AGAATTTGGTTGGGCTAGCA 57.397 45.000 18.24 0.00 0.00 3.49
3347 4981 3.511540 AGAAAGAATTTGGTTGGGCTAGC 59.488 43.478 6.04 6.04 39.27 3.42
3348 4982 6.378280 ACATAGAAAGAATTTGGTTGGGCTAG 59.622 38.462 0.00 0.00 39.27 3.42
3350 4984 5.086621 ACATAGAAAGAATTTGGTTGGGCT 58.913 37.500 0.00 0.00 39.27 5.19
3351 4985 5.405935 ACATAGAAAGAATTTGGTTGGGC 57.594 39.130 0.00 0.00 39.27 5.36
3352 4986 9.586435 GAATTACATAGAAAGAATTTGGTTGGG 57.414 33.333 0.00 0.00 39.27 4.12
3403 5037 1.204467 GGCGAATGATTTGGAAAGCCA 59.796 47.619 0.00 0.00 44.17 4.75
3405 5039 2.262211 GTGGCGAATGATTTGGAAAGC 58.738 47.619 0.00 0.00 0.00 3.51
3406 5040 2.518949 CGTGGCGAATGATTTGGAAAG 58.481 47.619 0.00 0.00 0.00 2.62
3407 5041 1.402194 GCGTGGCGAATGATTTGGAAA 60.402 47.619 0.00 0.00 0.00 3.13
3408 5042 0.170116 GCGTGGCGAATGATTTGGAA 59.830 50.000 0.00 0.00 0.00 3.53
3409 5043 1.653094 GGCGTGGCGAATGATTTGGA 61.653 55.000 0.00 0.00 0.00 3.53
3410 5044 1.226660 GGCGTGGCGAATGATTTGG 60.227 57.895 0.00 0.00 0.00 3.28
3413 5047 1.095228 AATCGGCGTGGCGAATGATT 61.095 50.000 22.23 9.39 0.00 2.57
3414 5048 1.498865 GAATCGGCGTGGCGAATGAT 61.499 55.000 22.23 9.21 0.00 2.45
3417 5051 1.449601 AAGAATCGGCGTGGCGAAT 60.450 52.632 22.23 14.49 0.00 3.34
3419 5053 2.813474 CAAGAATCGGCGTGGCGA 60.813 61.111 20.77 20.77 0.00 5.54
3423 5057 1.531149 ACAGAAACAAGAATCGGCGTG 59.469 47.619 6.85 0.00 0.00 5.34
3424 5058 1.531149 CACAGAAACAAGAATCGGCGT 59.469 47.619 6.85 0.00 0.00 5.68
3426 5060 1.725931 CGCACAGAAACAAGAATCGGC 60.726 52.381 0.00 0.00 0.00 5.54
3427 5061 1.531149 ACGCACAGAAACAAGAATCGG 59.469 47.619 0.00 0.00 0.00 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.