Multiple sequence alignment - TraesCS7B01G291800
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7B01G291800 | chr7B | 100.000 | 6900 | 0 | 0 | 1 | 6900 | 528746876 | 528753775 | 0.000000e+00 | 12743.0 |
1 | TraesCS7B01G291800 | chr7B | 89.630 | 810 | 60 | 12 | 5201 | 6005 | 663047761 | 663046971 | 0.000000e+00 | 1009.0 |
2 | TraesCS7B01G291800 | chr7B | 98.134 | 268 | 4 | 1 | 291 | 557 | 123442151 | 123441884 | 3.770000e-127 | 466.0 |
3 | TraesCS7B01G291800 | chr7B | 88.000 | 275 | 11 | 4 | 940 | 1214 | 528726991 | 528727243 | 8.690000e-79 | 305.0 |
4 | TraesCS7B01G291800 | chr7B | 90.173 | 173 | 14 | 3 | 4963 | 5134 | 460995605 | 460995775 | 9.010000e-54 | 222.0 |
5 | TraesCS7B01G291800 | chr7B | 89.595 | 173 | 16 | 2 | 4956 | 5128 | 213467930 | 213468100 | 1.170000e-52 | 219.0 |
6 | TraesCS7B01G291800 | chr7B | 89.655 | 174 | 14 | 4 | 4957 | 5130 | 490207985 | 490208154 | 1.170000e-52 | 219.0 |
7 | TraesCS7B01G291800 | chr7D | 94.696 | 2734 | 74 | 20 | 2091 | 4768 | 500616336 | 500619054 | 0.000000e+00 | 4180.0 |
8 | TraesCS7B01G291800 | chr7D | 94.864 | 1655 | 65 | 9 | 4778 | 6423 | 500619328 | 500620971 | 0.000000e+00 | 2567.0 |
9 | TraesCS7B01G291800 | chr7D | 96.335 | 1419 | 32 | 9 | 558 | 1968 | 500614938 | 500616344 | 0.000000e+00 | 2314.0 |
10 | TraesCS7B01G291800 | chr7D | 92.459 | 663 | 22 | 14 | 555 | 1214 | 500251198 | 500251835 | 0.000000e+00 | 922.0 |
11 | TraesCS7B01G291800 | chr7D | 89.655 | 174 | 16 | 2 | 4957 | 5130 | 465477778 | 465477949 | 3.240000e-53 | 220.0 |
12 | TraesCS7B01G291800 | chr7D | 89.595 | 173 | 16 | 2 | 4956 | 5128 | 236831560 | 236831730 | 1.170000e-52 | 219.0 |
13 | TraesCS7B01G291800 | chr7D | 95.192 | 104 | 5 | 0 | 6482 | 6585 | 500620974 | 500621077 | 1.540000e-36 | 165.0 |
14 | TraesCS7B01G291800 | chr7A | 93.712 | 1829 | 56 | 19 | 3179 | 4965 | 566530136 | 566531947 | 0.000000e+00 | 2686.0 |
15 | TraesCS7B01G291800 | chr7A | 96.357 | 1400 | 48 | 3 | 567 | 1965 | 566527369 | 566528766 | 0.000000e+00 | 2300.0 |
16 | TraesCS7B01G291800 | chr7A | 94.665 | 1462 | 67 | 7 | 5126 | 6585 | 566531946 | 566533398 | 0.000000e+00 | 2257.0 |
17 | TraesCS7B01G291800 | chr7A | 93.214 | 1120 | 38 | 7 | 2091 | 3177 | 566528761 | 566529875 | 0.000000e+00 | 1613.0 |
18 | TraesCS7B01G291800 | chr7A | 93.041 | 661 | 22 | 10 | 558 | 1214 | 566263545 | 566264185 | 0.000000e+00 | 944.0 |
19 | TraesCS7B01G291800 | chr7A | 93.041 | 661 | 22 | 10 | 558 | 1214 | 566280209 | 566280849 | 0.000000e+00 | 944.0 |
20 | TraesCS7B01G291800 | chr7A | 93.041 | 661 | 22 | 10 | 558 | 1214 | 566292506 | 566293146 | 0.000000e+00 | 944.0 |
21 | TraesCS7B01G291800 | chr7A | 93.041 | 661 | 22 | 10 | 558 | 1214 | 566304008 | 566304648 | 0.000000e+00 | 944.0 |
22 | TraesCS7B01G291800 | chr7A | 93.041 | 661 | 22 | 10 | 558 | 1214 | 566327611 | 566328251 | 0.000000e+00 | 944.0 |
23 | TraesCS7B01G291800 | chr7A | 91.705 | 651 | 20 | 13 | 558 | 1204 | 566339881 | 566340501 | 0.000000e+00 | 872.0 |
24 | TraesCS7B01G291800 | chr7A | 92.712 | 590 | 19 | 10 | 558 | 1143 | 566315834 | 566316403 | 0.000000e+00 | 830.0 |
25 | TraesCS7B01G291800 | chr7A | 98.084 | 261 | 5 | 0 | 297 | 557 | 233305544 | 233305284 | 8.160000e-124 | 455.0 |
26 | TraesCS7B01G291800 | chr7A | 86.486 | 259 | 29 | 5 | 17 | 272 | 566263131 | 566263386 | 5.270000e-71 | 279.0 |
27 | TraesCS7B01G291800 | chr7A | 86.486 | 259 | 29 | 5 | 17 | 272 | 566303594 | 566303849 | 5.270000e-71 | 279.0 |
28 | TraesCS7B01G291800 | chr7A | 86.486 | 259 | 29 | 5 | 17 | 272 | 566327197 | 566327452 | 5.270000e-71 | 279.0 |
29 | TraesCS7B01G291800 | chr7A | 86.486 | 259 | 29 | 5 | 17 | 272 | 566339467 | 566339722 | 5.270000e-71 | 279.0 |
30 | TraesCS7B01G291800 | chr7A | 86.100 | 259 | 30 | 5 | 17 | 272 | 566279795 | 566280050 | 2.450000e-69 | 274.0 |
31 | TraesCS7B01G291800 | chr7A | 85.769 | 260 | 30 | 5 | 17 | 272 | 566292091 | 566292347 | 1.140000e-67 | 268.0 |
32 | TraesCS7B01G291800 | chr7A | 85.769 | 260 | 30 | 5 | 17 | 272 | 566315419 | 566315675 | 1.140000e-67 | 268.0 |
33 | TraesCS7B01G291800 | chr7A | 85.000 | 260 | 32 | 5 | 17 | 272 | 566314715 | 566314971 | 2.470000e-64 | 257.0 |
34 | TraesCS7B01G291800 | chr7A | 90.173 | 173 | 14 | 3 | 4963 | 5134 | 494786828 | 494786998 | 9.010000e-54 | 222.0 |
35 | TraesCS7B01G291800 | chr7A | 87.912 | 182 | 14 | 6 | 50 | 226 | 566526950 | 566527128 | 2.520000e-49 | 207.0 |
36 | TraesCS7B01G291800 | chr6B | 90.023 | 862 | 76 | 6 | 5145 | 6005 | 45803713 | 45802861 | 0.000000e+00 | 1107.0 |
37 | TraesCS7B01G291800 | chr6B | 87.715 | 814 | 81 | 10 | 5198 | 6005 | 44391096 | 44391896 | 0.000000e+00 | 931.0 |
38 | TraesCS7B01G291800 | chr6B | 88.080 | 797 | 73 | 16 | 5211 | 6005 | 44497811 | 44497035 | 0.000000e+00 | 926.0 |
39 | TraesCS7B01G291800 | chr6B | 88.940 | 651 | 63 | 6 | 5211 | 5858 | 44795147 | 44794503 | 0.000000e+00 | 795.0 |
40 | TraesCS7B01G291800 | chr6B | 90.786 | 369 | 29 | 4 | 4036 | 4399 | 45804473 | 45804105 | 8.040000e-134 | 488.0 |
41 | TraesCS7B01G291800 | chr6B | 97.368 | 266 | 7 | 0 | 298 | 563 | 329714146 | 329713881 | 2.930000e-123 | 453.0 |
42 | TraesCS7B01G291800 | chr6B | 92.248 | 258 | 14 | 3 | 3738 | 3995 | 45804720 | 45804469 | 1.830000e-95 | 361.0 |
43 | TraesCS7B01G291800 | chr6B | 85.623 | 313 | 29 | 10 | 6045 | 6357 | 45802860 | 45802564 | 1.440000e-81 | 315.0 |
44 | TraesCS7B01G291800 | chr6B | 84.494 | 316 | 33 | 8 | 6045 | 6358 | 44497034 | 44496733 | 1.450000e-76 | 298.0 |
45 | TraesCS7B01G291800 | chr6B | 81.553 | 309 | 38 | 10 | 6045 | 6351 | 44391897 | 44392188 | 3.220000e-58 | 237.0 |
46 | TraesCS7B01G291800 | chr6B | 94.964 | 139 | 7 | 0 | 1956 | 2094 | 604109145 | 604109283 | 1.170000e-52 | 219.0 |
47 | TraesCS7B01G291800 | chr6B | 94.615 | 130 | 7 | 0 | 1963 | 2092 | 18270505 | 18270634 | 1.170000e-47 | 202.0 |
48 | TraesCS7B01G291800 | chr2B | 89.340 | 863 | 83 | 5 | 5143 | 6005 | 83408552 | 83409405 | 0.000000e+00 | 1075.0 |
49 | TraesCS7B01G291800 | chr2B | 88.148 | 810 | 81 | 9 | 5198 | 6005 | 195644151 | 195644947 | 0.000000e+00 | 950.0 |
50 | TraesCS7B01G291800 | chr2B | 98.855 | 262 | 3 | 0 | 298 | 559 | 147482089 | 147482350 | 1.050000e-127 | 468.0 |
51 | TraesCS7B01G291800 | chr2B | 98.077 | 260 | 5 | 0 | 298 | 557 | 57025349 | 57025090 | 2.930000e-123 | 453.0 |
52 | TraesCS7B01G291800 | chr2B | 91.860 | 258 | 14 | 4 | 3738 | 3995 | 83407214 | 83407464 | 3.060000e-93 | 353.0 |
53 | TraesCS7B01G291800 | chr2B | 88.079 | 302 | 26 | 9 | 4391 | 4687 | 1978435 | 1978731 | 3.960000e-92 | 350.0 |
54 | TraesCS7B01G291800 | chr2B | 90.734 | 259 | 21 | 2 | 4036 | 4291 | 83407460 | 83407718 | 6.630000e-90 | 342.0 |
55 | TraesCS7B01G291800 | chr2B | 83.175 | 315 | 37 | 9 | 6045 | 6357 | 195644948 | 195645248 | 2.450000e-69 | 274.0 |
56 | TraesCS7B01G291800 | chr4A | 96.486 | 313 | 10 | 1 | 6589 | 6900 | 703230204 | 703229892 | 3.690000e-142 | 516.0 |
57 | TraesCS7B01G291800 | chr4A | 97.753 | 267 | 5 | 1 | 292 | 558 | 645738935 | 645739200 | 6.310000e-125 | 459.0 |
58 | TraesCS7B01G291800 | chr5B | 98.134 | 268 | 5 | 0 | 291 | 558 | 147458698 | 147458965 | 1.050000e-127 | 468.0 |
59 | TraesCS7B01G291800 | chr5B | 91.414 | 198 | 16 | 1 | 6703 | 6900 | 246592980 | 246593176 | 3.170000e-68 | 270.0 |
60 | TraesCS7B01G291800 | chr5B | 85.333 | 150 | 21 | 1 | 6586 | 6734 | 455353485 | 455353336 | 3.330000e-33 | 154.0 |
61 | TraesCS7B01G291800 | chr4B | 98.462 | 260 | 4 | 0 | 298 | 557 | 652280705 | 652280964 | 6.310000e-125 | 459.0 |
62 | TraesCS7B01G291800 | chr4B | 95.312 | 128 | 6 | 0 | 1963 | 2090 | 601197186 | 601197313 | 3.260000e-48 | 204.0 |
63 | TraesCS7B01G291800 | chr4B | 87.500 | 144 | 16 | 2 | 6587 | 6729 | 88421502 | 88421644 | 1.540000e-36 | 165.0 |
64 | TraesCS7B01G291800 | chr4B | 86.014 | 143 | 16 | 3 | 6589 | 6729 | 615712319 | 615712179 | 4.310000e-32 | 150.0 |
65 | TraesCS7B01G291800 | chr1A | 98.084 | 261 | 5 | 0 | 297 | 557 | 4700256 | 4700516 | 8.160000e-124 | 455.0 |
66 | TraesCS7B01G291800 | chr5D | 89.347 | 291 | 29 | 2 | 4398 | 4687 | 317387086 | 317386797 | 1.410000e-96 | 364.0 |
67 | TraesCS7B01G291800 | chr5D | 91.515 | 165 | 11 | 3 | 4964 | 5128 | 528616626 | 528616787 | 2.500000e-54 | 224.0 |
68 | TraesCS7B01G291800 | chr5D | 88.043 | 184 | 16 | 5 | 4951 | 5131 | 330893407 | 330893587 | 5.420000e-51 | 213.0 |
69 | TraesCS7B01G291800 | chr3D | 89.347 | 291 | 28 | 3 | 4397 | 4684 | 369413402 | 369413692 | 5.090000e-96 | 363.0 |
70 | TraesCS7B01G291800 | chr4D | 88.356 | 292 | 28 | 5 | 4397 | 4684 | 4091948 | 4091659 | 5.120000e-91 | 346.0 |
71 | TraesCS7B01G291800 | chr4D | 87.748 | 302 | 28 | 8 | 4398 | 4690 | 93436750 | 93437051 | 1.840000e-90 | 344.0 |
72 | TraesCS7B01G291800 | chr5A | 90.494 | 263 | 21 | 4 | 4412 | 4671 | 476664742 | 476665003 | 1.840000e-90 | 344.0 |
73 | TraesCS7B01G291800 | chr5A | 85.915 | 142 | 19 | 1 | 6589 | 6729 | 631283508 | 631283367 | 4.310000e-32 | 150.0 |
74 | TraesCS7B01G291800 | chr3A | 88.194 | 288 | 27 | 4 | 4397 | 4677 | 490622582 | 490622869 | 3.080000e-88 | 337.0 |
75 | TraesCS7B01G291800 | chr3A | 89.865 | 148 | 15 | 0 | 1954 | 2101 | 648550473 | 648550620 | 2.540000e-44 | 191.0 |
76 | TraesCS7B01G291800 | chr1B | 96.063 | 127 | 5 | 0 | 1964 | 2090 | 518809548 | 518809674 | 2.520000e-49 | 207.0 |
77 | TraesCS7B01G291800 | chr1B | 85.430 | 151 | 18 | 4 | 6586 | 6734 | 482483520 | 482483372 | 3.330000e-33 | 154.0 |
78 | TraesCS7B01G291800 | chr1B | 85.714 | 147 | 16 | 4 | 6586 | 6729 | 28035472 | 28035328 | 4.310000e-32 | 150.0 |
79 | TraesCS7B01G291800 | chr3B | 95.312 | 128 | 6 | 0 | 1963 | 2090 | 252355502 | 252355375 | 3.260000e-48 | 204.0 |
80 | TraesCS7B01G291800 | chr3B | 91.549 | 142 | 11 | 1 | 1949 | 2090 | 395851910 | 395851770 | 1.960000e-45 | 195.0 |
81 | TraesCS7B01G291800 | chr3B | 85.616 | 146 | 20 | 1 | 6585 | 6729 | 434730668 | 434730523 | 1.200000e-32 | 152.0 |
82 | TraesCS7B01G291800 | chr3B | 90.909 | 44 | 4 | 0 | 4388 | 4431 | 501121321 | 501121364 | 7.470000e-05 | 60.2 |
83 | TraesCS7B01G291800 | chrUn | 93.431 | 137 | 5 | 4 | 1963 | 2096 | 52994565 | 52994430 | 4.220000e-47 | 200.0 |
84 | TraesCS7B01G291800 | chr6A | 91.608 | 143 | 10 | 2 | 1963 | 2103 | 99061398 | 99061540 | 5.460000e-46 | 196.0 |
85 | TraesCS7B01G291800 | chr1D | 85.417 | 144 | 20 | 1 | 6586 | 6729 | 450045065 | 450045207 | 1.550000e-31 | 148.0 |
86 | TraesCS7B01G291800 | chr2A | 94.444 | 36 | 2 | 0 | 4390 | 4425 | 733349141 | 733349176 | 1.000000e-03 | 56.5 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7B01G291800 | chr7B | 528746876 | 528753775 | 6899 | False | 12743.000000 | 12743 | 100.000000 | 1 | 6900 | 1 | chr7B.!!$F5 | 6899 |
1 | TraesCS7B01G291800 | chr7B | 663046971 | 663047761 | 790 | True | 1009.000000 | 1009 | 89.630000 | 5201 | 6005 | 1 | chr7B.!!$R2 | 804 |
2 | TraesCS7B01G291800 | chr7D | 500614938 | 500621077 | 6139 | False | 2306.500000 | 4180 | 95.271750 | 558 | 6585 | 4 | chr7D.!!$F4 | 6027 |
3 | TraesCS7B01G291800 | chr7D | 500251198 | 500251835 | 637 | False | 922.000000 | 922 | 92.459000 | 555 | 1214 | 1 | chr7D.!!$F3 | 659 |
4 | TraesCS7B01G291800 | chr7A | 566526950 | 566533398 | 6448 | False | 1812.600000 | 2686 | 93.172000 | 50 | 6585 | 5 | chr7A.!!$F9 | 6535 |
5 | TraesCS7B01G291800 | chr7A | 566263131 | 566264185 | 1054 | False | 611.500000 | 944 | 89.763500 | 17 | 1214 | 2 | chr7A.!!$F2 | 1197 |
6 | TraesCS7B01G291800 | chr7A | 566303594 | 566304648 | 1054 | False | 611.500000 | 944 | 89.763500 | 17 | 1214 | 2 | chr7A.!!$F5 | 1197 |
7 | TraesCS7B01G291800 | chr7A | 566327197 | 566328251 | 1054 | False | 611.500000 | 944 | 89.763500 | 17 | 1214 | 2 | chr7A.!!$F7 | 1197 |
8 | TraesCS7B01G291800 | chr7A | 566279795 | 566280849 | 1054 | False | 609.000000 | 944 | 89.570500 | 17 | 1214 | 2 | chr7A.!!$F3 | 1197 |
9 | TraesCS7B01G291800 | chr7A | 566292091 | 566293146 | 1055 | False | 606.000000 | 944 | 89.405000 | 17 | 1214 | 2 | chr7A.!!$F4 | 1197 |
10 | TraesCS7B01G291800 | chr7A | 566339467 | 566340501 | 1034 | False | 575.500000 | 872 | 89.095500 | 17 | 1204 | 2 | chr7A.!!$F8 | 1187 |
11 | TraesCS7B01G291800 | chr7A | 566314715 | 566316403 | 1688 | False | 451.666667 | 830 | 87.827000 | 17 | 1143 | 3 | chr7A.!!$F6 | 1126 |
12 | TraesCS7B01G291800 | chr6B | 44794503 | 44795147 | 644 | True | 795.000000 | 795 | 88.940000 | 5211 | 5858 | 1 | chr6B.!!$R1 | 647 |
13 | TraesCS7B01G291800 | chr6B | 44496733 | 44497811 | 1078 | True | 612.000000 | 926 | 86.287000 | 5211 | 6358 | 2 | chr6B.!!$R3 | 1147 |
14 | TraesCS7B01G291800 | chr6B | 44391096 | 44392188 | 1092 | False | 584.000000 | 931 | 84.634000 | 5198 | 6351 | 2 | chr6B.!!$F3 | 1153 |
15 | TraesCS7B01G291800 | chr6B | 45802564 | 45804720 | 2156 | True | 567.750000 | 1107 | 89.670000 | 3738 | 6357 | 4 | chr6B.!!$R4 | 2619 |
16 | TraesCS7B01G291800 | chr2B | 195644151 | 195645248 | 1097 | False | 612.000000 | 950 | 85.661500 | 5198 | 6357 | 2 | chr2B.!!$F4 | 1159 |
17 | TraesCS7B01G291800 | chr2B | 83407214 | 83409405 | 2191 | False | 590.000000 | 1075 | 90.644667 | 3738 | 6005 | 3 | chr2B.!!$F3 | 2267 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
889 | 1536 | 0.030908 | CTCGAAGTCGGTAGCCCATC | 59.969 | 60.000 | 0.11 | 0.00 | 40.29 | 3.51 | F |
1258 | 1906 | 0.178533 | CTCCGAGGACGAGGACTACT | 59.821 | 60.000 | 0.00 | 0.00 | 42.66 | 2.57 | F |
1974 | 2623 | 0.115745 | TTCCTTGGTACTCCCTCGGT | 59.884 | 55.000 | 0.00 | 0.00 | 0.00 | 4.69 | F |
1975 | 2624 | 0.324091 | TCCTTGGTACTCCCTCGGTC | 60.324 | 60.000 | 0.00 | 0.00 | 0.00 | 4.79 | F |
1981 | 2630 | 0.890683 | GTACTCCCTCGGTCCGAAAA | 59.109 | 55.000 | 16.23 | 2.66 | 34.74 | 2.29 | F |
3870 | 4850 | 1.376424 | AACGACCCAGAGCATGCAG | 60.376 | 57.895 | 21.98 | 9.16 | 0.00 | 4.41 | F |
4726 | 6083 | 1.067283 | CGCTTCAGTGATGGTGTCTCT | 60.067 | 52.381 | 8.02 | 0.00 | 0.00 | 3.10 | F |
4981 | 6604 | 2.250273 | AGCTACTCCCTCCATTCCCTAA | 59.750 | 50.000 | 0.00 | 0.00 | 0.00 | 2.69 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1962 | 2611 | 0.890683 | TTTTCGGACCGAGGGAGTAC | 59.109 | 55.000 | 17.51 | 0.0 | 37.14 | 2.73 | R |
3227 | 4185 | 1.567357 | TTTTTAAGGGCCCTGGATGC | 58.433 | 50.000 | 29.50 | 0.0 | 0.00 | 3.91 | R |
3812 | 4792 | 2.230508 | GTCGTCTACTGTGAACCCATCA | 59.769 | 50.000 | 0.00 | 0.0 | 35.05 | 3.07 | R |
3886 | 4866 | 4.036027 | CAGTTGCACACATCAGAGTTCTTT | 59.964 | 41.667 | 0.00 | 0.0 | 0.00 | 2.52 | R |
4247 | 5231 | 9.188588 | CACTTGTGATATAATCCATGAATTTGC | 57.811 | 33.333 | 0.00 | 0.0 | 0.00 | 3.68 | R |
4771 | 6128 | 0.034896 | CGACTAACACAACCCTGGCT | 59.965 | 55.000 | 0.00 | 0.0 | 0.00 | 4.75 | R |
5595 | 7242 | 0.103937 | AGCAGCCGCAAGAGAGATAC | 59.896 | 55.000 | 0.00 | 0.0 | 42.27 | 2.24 | R |
6665 | 8331 | 0.109597 | GCCTGTCGCCATGTTTCAAG | 60.110 | 55.000 | 0.00 | 0.0 | 0.00 | 3.02 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
20 | 21 | 2.489938 | TGCCTAAATTGCTCGTCCTT | 57.510 | 45.000 | 0.00 | 0.00 | 0.00 | 3.36 |
29 | 30 | 8.244113 | CCTAAATTGCTCGTCCTTTCTTAATTT | 58.756 | 33.333 | 0.00 | 0.00 | 32.96 | 1.82 |
37 | 38 | 7.553881 | TCGTCCTTTCTTAATTTGATGGATC | 57.446 | 36.000 | 0.00 | 0.00 | 0.00 | 3.36 |
39 | 40 | 7.280876 | TCGTCCTTTCTTAATTTGATGGATCTG | 59.719 | 37.037 | 0.00 | 0.00 | 0.00 | 2.90 |
42 | 43 | 8.960591 | TCCTTTCTTAATTTGATGGATCTGTTC | 58.039 | 33.333 | 0.00 | 0.00 | 0.00 | 3.18 |
44 | 45 | 7.921786 | TTCTTAATTTGATGGATCTGTTCGT | 57.078 | 32.000 | 0.00 | 0.00 | 0.00 | 3.85 |
45 | 46 | 7.539712 | TCTTAATTTGATGGATCTGTTCGTC | 57.460 | 36.000 | 0.00 | 0.00 | 0.00 | 4.20 |
48 | 49 | 2.967599 | TGATGGATCTGTTCGTCCTG | 57.032 | 50.000 | 0.00 | 0.00 | 35.49 | 3.86 |
66 | 68 | 2.945008 | CCTGCACATGATAAATCACCGT | 59.055 | 45.455 | 0.00 | 0.00 | 40.03 | 4.83 |
102 | 104 | 6.540438 | ACCATCATGCAGAAATTTGATTCT | 57.460 | 33.333 | 0.00 | 0.00 | 40.23 | 2.40 |
105 | 107 | 7.123098 | ACCATCATGCAGAAATTTGATTCTACA | 59.877 | 33.333 | 0.00 | 0.00 | 37.56 | 2.74 |
163 | 165 | 7.283127 | TGCTAGAGGGCAACATAAAAATTAGAG | 59.717 | 37.037 | 0.00 | 0.00 | 39.43 | 2.43 |
166 | 168 | 8.230472 | AGAGGGCAACATAAAAATTAGAGATG | 57.770 | 34.615 | 0.00 | 0.00 | 39.74 | 2.90 |
232 | 238 | 6.494842 | TCGAAAGTCCATGTTTTGAAAAGAG | 58.505 | 36.000 | 0.00 | 0.00 | 0.00 | 2.85 |
237 | 243 | 5.302823 | AGTCCATGTTTTGAAAAGAGAAGGG | 59.697 | 40.000 | 0.00 | 0.00 | 0.00 | 3.95 |
238 | 244 | 4.039124 | TCCATGTTTTGAAAAGAGAAGGGC | 59.961 | 41.667 | 0.00 | 0.00 | 0.00 | 5.19 |
239 | 245 | 4.202243 | CCATGTTTTGAAAAGAGAAGGGCA | 60.202 | 41.667 | 0.00 | 0.00 | 0.00 | 5.36 |
240 | 246 | 5.358922 | CATGTTTTGAAAAGAGAAGGGCAA | 58.641 | 37.500 | 0.00 | 0.00 | 0.00 | 4.52 |
242 | 248 | 6.723298 | TGTTTTGAAAAGAGAAGGGCAATA | 57.277 | 33.333 | 0.00 | 0.00 | 0.00 | 1.90 |
243 | 249 | 6.512297 | TGTTTTGAAAAGAGAAGGGCAATAC | 58.488 | 36.000 | 0.00 | 0.00 | 0.00 | 1.89 |
248 | 254 | 5.250774 | TGAAAAGAGAAGGGCAATACCTAGT | 59.749 | 40.000 | 0.00 | 0.00 | 40.87 | 2.57 |
261 | 267 | 6.925211 | GCAATACCTAGTGCACATCTAGATA | 58.075 | 40.000 | 21.04 | 3.79 | 45.63 | 1.98 |
265 | 271 | 5.083122 | ACCTAGTGCACATCTAGATATGCT | 58.917 | 41.667 | 30.50 | 17.60 | 41.52 | 3.79 |
272 | 279 | 8.642432 | AGTGCACATCTAGATATGCTTTAGTAA | 58.358 | 33.333 | 30.50 | 10.96 | 41.52 | 2.24 |
273 | 280 | 9.261180 | GTGCACATCTAGATATGCTTTAGTAAA | 57.739 | 33.333 | 30.50 | 10.29 | 41.52 | 2.01 |
307 | 465 | 9.547279 | AAATTCAATTAAAATGTACTCCCTCCT | 57.453 | 29.630 | 0.00 | 0.00 | 0.00 | 3.69 |
308 | 466 | 9.547279 | AATTCAATTAAAATGTACTCCCTCCTT | 57.453 | 29.630 | 0.00 | 0.00 | 0.00 | 3.36 |
309 | 467 | 8.575649 | TTCAATTAAAATGTACTCCCTCCTTC | 57.424 | 34.615 | 0.00 | 0.00 | 0.00 | 3.46 |
310 | 468 | 7.116736 | TCAATTAAAATGTACTCCCTCCTTCC | 58.883 | 38.462 | 0.00 | 0.00 | 0.00 | 3.46 |
311 | 469 | 5.446260 | TTAAAATGTACTCCCTCCTTCCC | 57.554 | 43.478 | 0.00 | 0.00 | 0.00 | 3.97 |
312 | 470 | 2.661176 | AATGTACTCCCTCCTTCCCA | 57.339 | 50.000 | 0.00 | 0.00 | 0.00 | 4.37 |
316 | 474 | 3.265489 | TGTACTCCCTCCTTCCCAAAAT | 58.735 | 45.455 | 0.00 | 0.00 | 0.00 | 1.82 |
318 | 476 | 5.043762 | TGTACTCCCTCCTTCCCAAAATAT | 58.956 | 41.667 | 0.00 | 0.00 | 0.00 | 1.28 |
319 | 477 | 6.214278 | TGTACTCCCTCCTTCCCAAAATATA | 58.786 | 40.000 | 0.00 | 0.00 | 0.00 | 0.86 |
320 | 478 | 6.679303 | TGTACTCCCTCCTTCCCAAAATATAA | 59.321 | 38.462 | 0.00 | 0.00 | 0.00 | 0.98 |
321 | 479 | 6.267492 | ACTCCCTCCTTCCCAAAATATAAG | 57.733 | 41.667 | 0.00 | 0.00 | 0.00 | 1.73 |
323 | 481 | 4.141018 | TCCCTCCTTCCCAAAATATAAGGC | 60.141 | 45.833 | 0.00 | 0.00 | 38.70 | 4.35 |
326 | 484 | 2.031157 | CCTTCCCAAAATATAAGGCGCG | 60.031 | 50.000 | 0.00 | 0.00 | 32.66 | 6.86 |
327 | 485 | 2.623878 | TCCCAAAATATAAGGCGCGA | 57.376 | 45.000 | 12.10 | 0.00 | 0.00 | 5.87 |
328 | 486 | 3.134574 | TCCCAAAATATAAGGCGCGAT | 57.865 | 42.857 | 12.10 | 0.00 | 0.00 | 4.58 |
329 | 487 | 3.482436 | TCCCAAAATATAAGGCGCGATT | 58.518 | 40.909 | 12.10 | 6.21 | 0.00 | 3.34 |
330 | 488 | 3.252215 | TCCCAAAATATAAGGCGCGATTG | 59.748 | 43.478 | 12.10 | 0.00 | 0.00 | 2.67 |
331 | 489 | 3.252215 | CCCAAAATATAAGGCGCGATTGA | 59.748 | 43.478 | 12.10 | 0.00 | 0.00 | 2.57 |
332 | 490 | 4.219033 | CCAAAATATAAGGCGCGATTGAC | 58.781 | 43.478 | 12.10 | 0.00 | 0.00 | 3.18 |
333 | 491 | 4.024048 | CCAAAATATAAGGCGCGATTGACT | 60.024 | 41.667 | 12.10 | 0.00 | 0.00 | 3.41 |
334 | 492 | 5.505654 | CCAAAATATAAGGCGCGATTGACTT | 60.506 | 40.000 | 12.10 | 7.96 | 0.00 | 3.01 |
337 | 495 | 5.751243 | ATATAAGGCGCGATTGACTTTTT | 57.249 | 34.783 | 12.10 | 0.00 | 0.00 | 1.94 |
338 | 496 | 6.854496 | ATATAAGGCGCGATTGACTTTTTA | 57.146 | 33.333 | 12.10 | 0.00 | 0.00 | 1.52 |
339 | 497 | 2.894307 | AGGCGCGATTGACTTTTTAC | 57.106 | 45.000 | 12.10 | 0.00 | 0.00 | 2.01 |
341 | 499 | 1.520368 | GCGCGATTGACTTTTTACGG | 58.480 | 50.000 | 12.10 | 0.00 | 0.00 | 4.02 |
344 | 502 | 2.410730 | CGCGATTGACTTTTTACGGTCT | 59.589 | 45.455 | 0.00 | 0.00 | 34.01 | 3.85 |
345 | 503 | 3.120786 | CGCGATTGACTTTTTACGGTCTT | 60.121 | 43.478 | 0.00 | 0.00 | 34.01 | 3.01 |
346 | 504 | 4.609783 | CGCGATTGACTTTTTACGGTCTTT | 60.610 | 41.667 | 0.00 | 0.00 | 34.01 | 2.52 |
347 | 505 | 4.611366 | GCGATTGACTTTTTACGGTCTTTG | 59.389 | 41.667 | 0.00 | 0.00 | 34.01 | 2.77 |
349 | 507 | 6.599437 | CGATTGACTTTTTACGGTCTTTGAT | 58.401 | 36.000 | 0.00 | 0.00 | 34.01 | 2.57 |
350 | 508 | 6.519761 | CGATTGACTTTTTACGGTCTTTGATG | 59.480 | 38.462 | 0.00 | 0.00 | 34.01 | 3.07 |
351 | 509 | 5.103290 | TGACTTTTTACGGTCTTTGATGC | 57.897 | 39.130 | 0.00 | 0.00 | 34.01 | 3.91 |
353 | 511 | 4.855531 | ACTTTTTACGGTCTTTGATGCAC | 58.144 | 39.130 | 0.00 | 0.00 | 0.00 | 4.57 |
354 | 512 | 4.336993 | ACTTTTTACGGTCTTTGATGCACA | 59.663 | 37.500 | 0.00 | 0.00 | 0.00 | 4.57 |
355 | 513 | 4.902443 | TTTTACGGTCTTTGATGCACAA | 57.098 | 36.364 | 0.00 | 0.00 | 36.65 | 3.33 |
356 | 514 | 3.889196 | TTACGGTCTTTGATGCACAAC | 57.111 | 42.857 | 0.00 | 0.00 | 38.29 | 3.32 |
357 | 515 | 1.967319 | ACGGTCTTTGATGCACAACT | 58.033 | 45.000 | 0.00 | 0.00 | 38.29 | 3.16 |
361 | 519 | 3.243035 | CGGTCTTTGATGCACAACTTTGA | 60.243 | 43.478 | 0.00 | 0.00 | 38.29 | 2.69 |
362 | 520 | 4.044426 | GGTCTTTGATGCACAACTTTGAC | 58.956 | 43.478 | 0.00 | 2.64 | 38.29 | 3.18 |
363 | 521 | 4.044426 | GTCTTTGATGCACAACTTTGACC | 58.956 | 43.478 | 0.00 | 0.00 | 38.29 | 4.02 |
365 | 523 | 3.435105 | TTGATGCACAACTTTGACCAC | 57.565 | 42.857 | 0.00 | 0.00 | 33.18 | 4.16 |
366 | 524 | 2.653726 | TGATGCACAACTTTGACCACT | 58.346 | 42.857 | 0.00 | 0.00 | 0.00 | 4.00 |
368 | 526 | 4.203226 | TGATGCACAACTTTGACCACTAA | 58.797 | 39.130 | 0.00 | 0.00 | 0.00 | 2.24 |
369 | 527 | 4.826733 | TGATGCACAACTTTGACCACTAAT | 59.173 | 37.500 | 0.00 | 0.00 | 0.00 | 1.73 |
370 | 528 | 6.000840 | TGATGCACAACTTTGACCACTAATA | 58.999 | 36.000 | 0.00 | 0.00 | 0.00 | 0.98 |
371 | 529 | 6.658816 | TGATGCACAACTTTGACCACTAATAT | 59.341 | 34.615 | 0.00 | 0.00 | 0.00 | 1.28 |
372 | 530 | 7.826744 | TGATGCACAACTTTGACCACTAATATA | 59.173 | 33.333 | 0.00 | 0.00 | 0.00 | 0.86 |
373 | 531 | 8.752005 | ATGCACAACTTTGACCACTAATATAT | 57.248 | 30.769 | 0.00 | 0.00 | 0.00 | 0.86 |
374 | 532 | 9.845740 | ATGCACAACTTTGACCACTAATATATA | 57.154 | 29.630 | 0.00 | 0.00 | 0.00 | 0.86 |
375 | 533 | 9.845740 | TGCACAACTTTGACCACTAATATATAT | 57.154 | 29.630 | 0.00 | 0.00 | 0.00 | 0.86 |
426 | 584 | 7.642071 | AATGACATTGTTGTATTTGTCTTGC | 57.358 | 32.000 | 0.00 | 0.00 | 39.33 | 4.01 |
428 | 586 | 6.567959 | TGACATTGTTGTATTTGTCTTGCAA | 58.432 | 32.000 | 0.00 | 0.00 | 39.33 | 4.08 |
429 | 587 | 7.038048 | TGACATTGTTGTATTTGTCTTGCAAA | 58.962 | 30.769 | 0.00 | 0.00 | 42.71 | 3.68 |
430 | 588 | 7.222417 | TGACATTGTTGTATTTGTCTTGCAAAG | 59.778 | 33.333 | 0.00 | 0.00 | 42.24 | 2.77 |
431 | 589 | 7.776418 | GACATTGTTGTATTTGTCTTGCAAAGC | 60.776 | 37.037 | 0.00 | 0.00 | 42.24 | 3.51 |
507 | 955 | 5.450376 | AATATAGTCAAAGTTGTGCGACG | 57.550 | 39.130 | 0.00 | 0.00 | 33.56 | 5.12 |
508 | 956 | 2.495409 | TAGTCAAAGTTGTGCGACGA | 57.505 | 45.000 | 0.00 | 0.00 | 33.56 | 4.20 |
510 | 958 | 1.593006 | AGTCAAAGTTGTGCGACGAAG | 59.407 | 47.619 | 0.00 | 0.00 | 33.56 | 3.79 |
512 | 960 | 1.591158 | TCAAAGTTGTGCGACGAAGAC | 59.409 | 47.619 | 0.00 | 0.00 | 0.00 | 3.01 |
513 | 961 | 0.935196 | AAAGTTGTGCGACGAAGACC | 59.065 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
515 | 963 | 0.597637 | AGTTGTGCGACGAAGACCAG | 60.598 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
518 | 966 | 0.103390 | TGTGCGACGAAGACCAGAAA | 59.897 | 50.000 | 0.00 | 0.00 | 0.00 | 2.52 |
519 | 967 | 1.214367 | GTGCGACGAAGACCAGAAAA | 58.786 | 50.000 | 0.00 | 0.00 | 0.00 | 2.29 |
520 | 968 | 1.192534 | GTGCGACGAAGACCAGAAAAG | 59.807 | 52.381 | 0.00 | 0.00 | 0.00 | 2.27 |
521 | 969 | 1.202486 | TGCGACGAAGACCAGAAAAGT | 60.202 | 47.619 | 0.00 | 0.00 | 0.00 | 2.66 |
522 | 970 | 1.456165 | GCGACGAAGACCAGAAAAGTC | 59.544 | 52.381 | 0.00 | 0.00 | 34.31 | 3.01 |
523 | 971 | 2.739292 | CGACGAAGACCAGAAAAGTCA | 58.261 | 47.619 | 0.00 | 0.00 | 36.68 | 3.41 |
524 | 972 | 3.120792 | CGACGAAGACCAGAAAAGTCAA | 58.879 | 45.455 | 0.00 | 0.00 | 36.68 | 3.18 |
525 | 973 | 3.554324 | CGACGAAGACCAGAAAAGTCAAA | 59.446 | 43.478 | 0.00 | 0.00 | 36.68 | 2.69 |
526 | 974 | 4.550255 | CGACGAAGACCAGAAAAGTCAAAC | 60.550 | 45.833 | 0.00 | 0.00 | 36.68 | 2.93 |
527 | 975 | 3.626217 | ACGAAGACCAGAAAAGTCAAACC | 59.374 | 43.478 | 0.00 | 0.00 | 36.68 | 3.27 |
529 | 977 | 3.277142 | AGACCAGAAAAGTCAAACCGT | 57.723 | 42.857 | 0.00 | 0.00 | 36.68 | 4.83 |
532 | 980 | 1.269051 | CCAGAAAAGTCAAACCGTGCC | 60.269 | 52.381 | 0.00 | 0.00 | 0.00 | 5.01 |
533 | 981 | 1.676006 | CAGAAAAGTCAAACCGTGCCT | 59.324 | 47.619 | 0.00 | 0.00 | 0.00 | 4.75 |
534 | 982 | 2.099098 | CAGAAAAGTCAAACCGTGCCTT | 59.901 | 45.455 | 0.00 | 0.00 | 0.00 | 4.35 |
535 | 983 | 3.314080 | CAGAAAAGTCAAACCGTGCCTTA | 59.686 | 43.478 | 0.00 | 0.00 | 0.00 | 2.69 |
537 | 985 | 5.180492 | CAGAAAAGTCAAACCGTGCCTTATA | 59.820 | 40.000 | 0.00 | 0.00 | 0.00 | 0.98 |
538 | 986 | 5.944007 | AGAAAAGTCAAACCGTGCCTTATAT | 59.056 | 36.000 | 0.00 | 0.00 | 0.00 | 0.86 |
539 | 987 | 6.433093 | AGAAAAGTCAAACCGTGCCTTATATT | 59.567 | 34.615 | 0.00 | 0.00 | 0.00 | 1.28 |
540 | 988 | 6.584185 | AAAGTCAAACCGTGCCTTATATTT | 57.416 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
543 | 991 | 5.099575 | GTCAAACCGTGCCTTATATTTTGG | 58.900 | 41.667 | 0.00 | 0.00 | 0.00 | 3.28 |
545 | 993 | 3.655615 | ACCGTGCCTTATATTTTGGGA | 57.344 | 42.857 | 0.00 | 0.00 | 0.00 | 4.37 |
546 | 994 | 3.970842 | ACCGTGCCTTATATTTTGGGAA | 58.029 | 40.909 | 0.00 | 0.00 | 0.00 | 3.97 |
547 | 995 | 3.951680 | ACCGTGCCTTATATTTTGGGAAG | 59.048 | 43.478 | 0.00 | 0.00 | 0.00 | 3.46 |
548 | 996 | 3.317993 | CCGTGCCTTATATTTTGGGAAGG | 59.682 | 47.826 | 0.00 | 0.00 | 41.26 | 3.46 |
551 | 999 | 4.584743 | GTGCCTTATATTTTGGGAAGGAGG | 59.415 | 45.833 | 3.71 | 0.00 | 40.88 | 4.30 |
552 | 1000 | 4.152647 | GCCTTATATTTTGGGAAGGAGGG | 58.847 | 47.826 | 3.71 | 0.00 | 40.88 | 4.30 |
553 | 1001 | 4.141018 | GCCTTATATTTTGGGAAGGAGGGA | 60.141 | 45.833 | 3.71 | 0.00 | 40.88 | 4.20 |
554 | 1002 | 5.635120 | CCTTATATTTTGGGAAGGAGGGAG | 58.365 | 45.833 | 0.00 | 0.00 | 40.88 | 4.30 |
555 | 1003 | 5.134509 | CCTTATATTTTGGGAAGGAGGGAGT | 59.865 | 44.000 | 0.00 | 0.00 | 40.88 | 3.85 |
556 | 1004 | 6.331837 | CCTTATATTTTGGGAAGGAGGGAGTA | 59.668 | 42.308 | 0.00 | 0.00 | 40.88 | 2.59 |
668 | 1297 | 4.629200 | CCAGCAAGATCTGTGACTAACTTC | 59.371 | 45.833 | 0.00 | 0.00 | 32.32 | 3.01 |
803 | 1433 | 4.013728 | ACTAAAAGTTGTGTCTGCCAACA | 58.986 | 39.130 | 6.11 | 0.00 | 43.61 | 3.33 |
813 | 1443 | 4.159321 | TGTGTCTGCCAACAAAATTCAAGA | 59.841 | 37.500 | 0.00 | 0.00 | 0.00 | 3.02 |
874 | 1521 | 3.140325 | AGCCCAAACAGAAAATCTCGA | 57.860 | 42.857 | 0.00 | 0.00 | 0.00 | 4.04 |
875 | 1522 | 3.486383 | AGCCCAAACAGAAAATCTCGAA | 58.514 | 40.909 | 0.00 | 0.00 | 0.00 | 3.71 |
876 | 1523 | 3.503748 | AGCCCAAACAGAAAATCTCGAAG | 59.496 | 43.478 | 0.00 | 0.00 | 0.00 | 3.79 |
877 | 1524 | 3.253432 | GCCCAAACAGAAAATCTCGAAGT | 59.747 | 43.478 | 0.00 | 0.00 | 0.00 | 3.01 |
878 | 1525 | 4.613850 | GCCCAAACAGAAAATCTCGAAGTC | 60.614 | 45.833 | 0.00 | 0.00 | 0.00 | 3.01 |
879 | 1526 | 4.377431 | CCCAAACAGAAAATCTCGAAGTCG | 60.377 | 45.833 | 0.00 | 0.00 | 41.45 | 4.18 |
880 | 1527 | 4.377431 | CCAAACAGAAAATCTCGAAGTCGG | 60.377 | 45.833 | 0.11 | 0.00 | 40.29 | 4.79 |
881 | 1528 | 3.662247 | ACAGAAAATCTCGAAGTCGGT | 57.338 | 42.857 | 0.11 | 0.00 | 40.29 | 4.69 |
882 | 1529 | 4.778534 | ACAGAAAATCTCGAAGTCGGTA | 57.221 | 40.909 | 0.11 | 0.00 | 40.29 | 4.02 |
883 | 1530 | 4.734917 | ACAGAAAATCTCGAAGTCGGTAG | 58.265 | 43.478 | 0.11 | 0.00 | 40.29 | 3.18 |
884 | 1531 | 3.548268 | CAGAAAATCTCGAAGTCGGTAGC | 59.452 | 47.826 | 0.11 | 0.00 | 40.29 | 3.58 |
885 | 1532 | 2.580966 | AAATCTCGAAGTCGGTAGCC | 57.419 | 50.000 | 0.11 | 0.00 | 40.29 | 3.93 |
886 | 1533 | 0.745468 | AATCTCGAAGTCGGTAGCCC | 59.255 | 55.000 | 0.11 | 0.00 | 40.29 | 5.19 |
887 | 1534 | 0.395311 | ATCTCGAAGTCGGTAGCCCA | 60.395 | 55.000 | 0.11 | 0.00 | 40.29 | 5.36 |
888 | 1535 | 0.395311 | TCTCGAAGTCGGTAGCCCAT | 60.395 | 55.000 | 0.11 | 0.00 | 40.29 | 4.00 |
889 | 1536 | 0.030908 | CTCGAAGTCGGTAGCCCATC | 59.969 | 60.000 | 0.11 | 0.00 | 40.29 | 3.51 |
890 | 1537 | 1.299165 | CGAAGTCGGTAGCCCATCG | 60.299 | 63.158 | 0.00 | 0.00 | 35.37 | 3.84 |
930 | 1578 | 1.301401 | CAGACGCGGTCAAAAGGGA | 60.301 | 57.895 | 12.47 | 0.00 | 34.60 | 4.20 |
1107 | 1755 | 2.047179 | GACGAGGCGGCCTTCTTT | 60.047 | 61.111 | 24.71 | 7.67 | 31.76 | 2.52 |
1258 | 1906 | 0.178533 | CTCCGAGGACGAGGACTACT | 59.821 | 60.000 | 0.00 | 0.00 | 42.66 | 2.57 |
1265 | 1913 | 1.593296 | GACGAGGACTACTTGGGCGT | 61.593 | 60.000 | 0.00 | 0.00 | 34.66 | 5.68 |
1283 | 1931 | 2.202932 | CGGCGACAAGGATGAGGG | 60.203 | 66.667 | 0.00 | 0.00 | 0.00 | 4.30 |
1510 | 2158 | 2.097918 | CGGACGAAGACGAGGACG | 59.902 | 66.667 | 0.00 | 0.00 | 42.66 | 4.79 |
1511 | 2159 | 2.385875 | CGGACGAAGACGAGGACGA | 61.386 | 63.158 | 0.00 | 0.00 | 42.66 | 4.20 |
1512 | 2160 | 1.134281 | GGACGAAGACGAGGACGAC | 59.866 | 63.158 | 0.00 | 0.00 | 42.66 | 4.34 |
1944 | 2593 | 9.477484 | GAGAGTTAAATGTTGTTCTTCTAGACA | 57.523 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
1959 | 2608 | 6.954684 | TCTTCTAGACAACCTTATCTGTTCCT | 59.045 | 38.462 | 0.00 | 0.00 | 0.00 | 3.36 |
1960 | 2609 | 7.455008 | TCTTCTAGACAACCTTATCTGTTCCTT | 59.545 | 37.037 | 0.00 | 0.00 | 0.00 | 3.36 |
1961 | 2610 | 6.936279 | TCTAGACAACCTTATCTGTTCCTTG | 58.064 | 40.000 | 0.00 | 0.00 | 0.00 | 3.61 |
1962 | 2611 | 4.911390 | AGACAACCTTATCTGTTCCTTGG | 58.089 | 43.478 | 0.00 | 0.00 | 0.00 | 3.61 |
1963 | 2612 | 4.351111 | AGACAACCTTATCTGTTCCTTGGT | 59.649 | 41.667 | 0.00 | 0.00 | 0.00 | 3.67 |
1964 | 2613 | 5.546499 | AGACAACCTTATCTGTTCCTTGGTA | 59.454 | 40.000 | 0.00 | 0.00 | 0.00 | 3.25 |
1965 | 2614 | 5.557866 | ACAACCTTATCTGTTCCTTGGTAC | 58.442 | 41.667 | 0.00 | 0.00 | 0.00 | 3.34 |
1966 | 2615 | 5.309806 | ACAACCTTATCTGTTCCTTGGTACT | 59.690 | 40.000 | 0.00 | 0.00 | 0.00 | 2.73 |
1967 | 2616 | 5.678955 | ACCTTATCTGTTCCTTGGTACTC | 57.321 | 43.478 | 0.00 | 0.00 | 0.00 | 2.59 |
1968 | 2617 | 4.470304 | ACCTTATCTGTTCCTTGGTACTCC | 59.530 | 45.833 | 0.00 | 0.00 | 0.00 | 3.85 |
1969 | 2618 | 4.141688 | CCTTATCTGTTCCTTGGTACTCCC | 60.142 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
1970 | 2619 | 2.715763 | TCTGTTCCTTGGTACTCCCT | 57.284 | 50.000 | 0.00 | 0.00 | 0.00 | 4.20 |
1971 | 2620 | 2.537143 | TCTGTTCCTTGGTACTCCCTC | 58.463 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
1972 | 2621 | 1.204941 | CTGTTCCTTGGTACTCCCTCG | 59.795 | 57.143 | 0.00 | 0.00 | 0.00 | 4.63 |
1973 | 2622 | 0.535797 | GTTCCTTGGTACTCCCTCGG | 59.464 | 60.000 | 0.00 | 0.00 | 0.00 | 4.63 |
1974 | 2623 | 0.115745 | TTCCTTGGTACTCCCTCGGT | 59.884 | 55.000 | 0.00 | 0.00 | 0.00 | 4.69 |
1975 | 2624 | 0.324091 | TCCTTGGTACTCCCTCGGTC | 60.324 | 60.000 | 0.00 | 0.00 | 0.00 | 4.79 |
1976 | 2625 | 1.328430 | CCTTGGTACTCCCTCGGTCC | 61.328 | 65.000 | 0.00 | 0.00 | 0.00 | 4.46 |
1977 | 2626 | 1.664321 | CTTGGTACTCCCTCGGTCCG | 61.664 | 65.000 | 4.39 | 4.39 | 0.00 | 4.79 |
1978 | 2627 | 2.141011 | TTGGTACTCCCTCGGTCCGA | 62.141 | 60.000 | 14.54 | 14.54 | 0.00 | 4.55 |
1979 | 2628 | 1.379044 | GGTACTCCCTCGGTCCGAA | 60.379 | 63.158 | 16.23 | 0.00 | 34.74 | 4.30 |
1980 | 2629 | 0.967380 | GGTACTCCCTCGGTCCGAAA | 60.967 | 60.000 | 16.23 | 3.03 | 34.74 | 3.46 |
1981 | 2630 | 0.890683 | GTACTCCCTCGGTCCGAAAA | 59.109 | 55.000 | 16.23 | 2.66 | 34.74 | 2.29 |
1982 | 2631 | 1.479730 | GTACTCCCTCGGTCCGAAAAT | 59.520 | 52.381 | 16.23 | 2.15 | 34.74 | 1.82 |
1983 | 2632 | 1.856629 | ACTCCCTCGGTCCGAAAATA | 58.143 | 50.000 | 16.23 | 0.42 | 34.74 | 1.40 |
1984 | 2633 | 1.479730 | ACTCCCTCGGTCCGAAAATAC | 59.520 | 52.381 | 16.23 | 0.00 | 34.74 | 1.89 |
1985 | 2634 | 1.755380 | CTCCCTCGGTCCGAAAATACT | 59.245 | 52.381 | 16.23 | 0.00 | 34.74 | 2.12 |
1986 | 2635 | 2.167900 | CTCCCTCGGTCCGAAAATACTT | 59.832 | 50.000 | 16.23 | 0.00 | 34.74 | 2.24 |
1987 | 2636 | 2.093869 | TCCCTCGGTCCGAAAATACTTG | 60.094 | 50.000 | 16.23 | 0.47 | 34.74 | 3.16 |
1988 | 2637 | 2.354403 | CCCTCGGTCCGAAAATACTTGT | 60.354 | 50.000 | 16.23 | 0.00 | 34.74 | 3.16 |
1989 | 2638 | 2.928116 | CCTCGGTCCGAAAATACTTGTC | 59.072 | 50.000 | 16.23 | 0.00 | 34.74 | 3.18 |
1990 | 2639 | 3.581755 | CTCGGTCCGAAAATACTTGTCA | 58.418 | 45.455 | 16.23 | 0.00 | 34.74 | 3.58 |
1991 | 2640 | 4.181578 | CTCGGTCCGAAAATACTTGTCAT | 58.818 | 43.478 | 16.23 | 0.00 | 34.74 | 3.06 |
1992 | 2641 | 4.178540 | TCGGTCCGAAAATACTTGTCATC | 58.821 | 43.478 | 12.68 | 0.00 | 31.06 | 2.92 |
1993 | 2642 | 3.930229 | CGGTCCGAAAATACTTGTCATCA | 59.070 | 43.478 | 4.91 | 0.00 | 0.00 | 3.07 |
1994 | 2643 | 4.390603 | CGGTCCGAAAATACTTGTCATCAA | 59.609 | 41.667 | 4.91 | 0.00 | 0.00 | 2.57 |
1995 | 2644 | 5.106869 | CGGTCCGAAAATACTTGTCATCAAA | 60.107 | 40.000 | 4.91 | 0.00 | 32.87 | 2.69 |
1996 | 2645 | 6.566942 | CGGTCCGAAAATACTTGTCATCAAAA | 60.567 | 38.462 | 4.91 | 0.00 | 32.87 | 2.44 |
1997 | 2646 | 7.312899 | GGTCCGAAAATACTTGTCATCAAAAT | 58.687 | 34.615 | 0.00 | 0.00 | 32.87 | 1.82 |
1998 | 2647 | 7.273381 | GGTCCGAAAATACTTGTCATCAAAATG | 59.727 | 37.037 | 0.00 | 0.00 | 32.87 | 2.32 |
1999 | 2648 | 8.020819 | GTCCGAAAATACTTGTCATCAAAATGA | 58.979 | 33.333 | 0.00 | 0.00 | 39.63 | 2.57 |
2000 | 2649 | 8.572185 | TCCGAAAATACTTGTCATCAAAATGAA | 58.428 | 29.630 | 0.00 | 0.00 | 43.42 | 2.57 |
2001 | 2650 | 9.357652 | CCGAAAATACTTGTCATCAAAATGAAT | 57.642 | 29.630 | 0.00 | 0.00 | 43.42 | 2.57 |
2008 | 2657 | 8.597662 | ACTTGTCATCAAAATGAATCAAAAGG | 57.402 | 30.769 | 0.00 | 0.00 | 43.42 | 3.11 |
2009 | 2658 | 7.658575 | ACTTGTCATCAAAATGAATCAAAAGGG | 59.341 | 33.333 | 0.00 | 0.00 | 43.42 | 3.95 |
2010 | 2659 | 7.300556 | TGTCATCAAAATGAATCAAAAGGGA | 57.699 | 32.000 | 0.00 | 0.00 | 43.42 | 4.20 |
2011 | 2660 | 7.909518 | TGTCATCAAAATGAATCAAAAGGGAT | 58.090 | 30.769 | 0.00 | 0.00 | 43.42 | 3.85 |
2012 | 2661 | 7.820386 | TGTCATCAAAATGAATCAAAAGGGATG | 59.180 | 33.333 | 0.00 | 0.00 | 43.42 | 3.51 |
2013 | 2662 | 7.820872 | GTCATCAAAATGAATCAAAAGGGATGT | 59.179 | 33.333 | 11.87 | 0.00 | 43.42 | 3.06 |
2014 | 2663 | 9.033711 | TCATCAAAATGAATCAAAAGGGATGTA | 57.966 | 29.630 | 11.87 | 2.14 | 38.97 | 2.29 |
2015 | 2664 | 9.826574 | CATCAAAATGAATCAAAAGGGATGTAT | 57.173 | 29.630 | 0.00 | 0.00 | 34.61 | 2.29 |
2017 | 2666 | 9.258629 | TCAAAATGAATCAAAAGGGATGTATCT | 57.741 | 29.630 | 0.00 | 0.00 | 0.00 | 1.98 |
2022 | 2671 | 9.736414 | ATGAATCAAAAGGGATGTATCTAGATG | 57.264 | 33.333 | 15.79 | 0.00 | 0.00 | 2.90 |
2023 | 2672 | 7.663081 | TGAATCAAAAGGGATGTATCTAGATGC | 59.337 | 37.037 | 15.79 | 14.54 | 0.00 | 3.91 |
2024 | 2673 | 6.499106 | TCAAAAGGGATGTATCTAGATGCA | 57.501 | 37.500 | 23.38 | 23.38 | 37.79 | 3.96 |
2025 | 2674 | 7.083062 | TCAAAAGGGATGTATCTAGATGCAT | 57.917 | 36.000 | 29.54 | 29.54 | 44.84 | 3.96 |
2026 | 2675 | 7.520798 | TCAAAAGGGATGTATCTAGATGCATT | 58.479 | 34.615 | 29.66 | 16.61 | 42.77 | 3.56 |
2027 | 2676 | 8.000709 | TCAAAAGGGATGTATCTAGATGCATTT | 58.999 | 33.333 | 29.66 | 20.46 | 42.77 | 2.32 |
2028 | 2677 | 8.636213 | CAAAAGGGATGTATCTAGATGCATTTT | 58.364 | 33.333 | 29.66 | 23.81 | 42.77 | 1.82 |
2029 | 2678 | 9.866655 | AAAAGGGATGTATCTAGATGCATTTTA | 57.133 | 29.630 | 29.66 | 8.65 | 42.77 | 1.52 |
2030 | 2679 | 9.512588 | AAAGGGATGTATCTAGATGCATTTTAG | 57.487 | 33.333 | 29.66 | 6.74 | 42.77 | 1.85 |
2031 | 2680 | 8.212259 | AGGGATGTATCTAGATGCATTTTAGT | 57.788 | 34.615 | 29.66 | 13.41 | 42.77 | 2.24 |
2032 | 2681 | 8.664079 | AGGGATGTATCTAGATGCATTTTAGTT | 58.336 | 33.333 | 29.66 | 12.78 | 42.77 | 2.24 |
2033 | 2682 | 8.940952 | GGGATGTATCTAGATGCATTTTAGTTC | 58.059 | 37.037 | 29.66 | 18.97 | 42.77 | 3.01 |
2034 | 2683 | 9.717942 | GGATGTATCTAGATGCATTTTAGTTCT | 57.282 | 33.333 | 29.66 | 11.50 | 42.77 | 3.01 |
2040 | 2689 | 8.824159 | TCTAGATGCATTTTAGTTCTAGATGC | 57.176 | 34.615 | 14.19 | 16.20 | 39.75 | 3.91 |
2044 | 2693 | 6.624352 | TGCATTTTAGTTCTAGATGCATCC | 57.376 | 37.500 | 23.06 | 7.42 | 45.62 | 3.51 |
2045 | 2694 | 6.359804 | TGCATTTTAGTTCTAGATGCATCCT | 58.640 | 36.000 | 23.06 | 14.40 | 45.62 | 3.24 |
2046 | 2695 | 6.830324 | TGCATTTTAGTTCTAGATGCATCCTT | 59.170 | 34.615 | 23.06 | 8.39 | 45.62 | 3.36 |
2047 | 2696 | 7.340232 | TGCATTTTAGTTCTAGATGCATCCTTT | 59.660 | 33.333 | 23.06 | 7.62 | 45.62 | 3.11 |
2048 | 2697 | 8.193438 | GCATTTTAGTTCTAGATGCATCCTTTT | 58.807 | 33.333 | 23.06 | 7.24 | 41.92 | 2.27 |
2072 | 2721 | 9.829507 | TTTTTGTCCATTTTGATGACAAGTATT | 57.170 | 25.926 | 0.00 | 0.00 | 37.13 | 1.89 |
2073 | 2722 | 9.829507 | TTTTGTCCATTTTGATGACAAGTATTT | 57.170 | 25.926 | 0.00 | 0.00 | 37.13 | 1.40 |
2074 | 2723 | 9.829507 | TTTGTCCATTTTGATGACAAGTATTTT | 57.170 | 25.926 | 0.00 | 0.00 | 37.13 | 1.82 |
2075 | 2724 | 9.829507 | TTGTCCATTTTGATGACAAGTATTTTT | 57.170 | 25.926 | 0.00 | 0.00 | 37.32 | 1.94 |
2076 | 2725 | 9.258826 | TGTCCATTTTGATGACAAGTATTTTTG | 57.741 | 29.630 | 0.00 | 0.00 | 37.32 | 2.44 |
2077 | 2726 | 8.711457 | GTCCATTTTGATGACAAGTATTTTTGG | 58.289 | 33.333 | 0.00 | 0.00 | 37.32 | 3.28 |
2078 | 2727 | 8.646004 | TCCATTTTGATGACAAGTATTTTTGGA | 58.354 | 29.630 | 0.00 | 0.00 | 37.32 | 3.53 |
2079 | 2728 | 8.711457 | CCATTTTGATGACAAGTATTTTTGGAC | 58.289 | 33.333 | 0.00 | 0.00 | 37.32 | 4.02 |
2080 | 2729 | 7.922505 | TTTTGATGACAAGTATTTTTGGACG | 57.077 | 32.000 | 0.00 | 0.00 | 37.32 | 4.79 |
2081 | 2730 | 5.621197 | TGATGACAAGTATTTTTGGACGG | 57.379 | 39.130 | 0.00 | 0.00 | 32.32 | 4.79 |
2082 | 2731 | 5.309638 | TGATGACAAGTATTTTTGGACGGA | 58.690 | 37.500 | 0.00 | 0.00 | 32.32 | 4.69 |
2083 | 2732 | 5.411361 | TGATGACAAGTATTTTTGGACGGAG | 59.589 | 40.000 | 0.00 | 0.00 | 32.32 | 4.63 |
2084 | 2733 | 4.069304 | TGACAAGTATTTTTGGACGGAGG | 58.931 | 43.478 | 0.00 | 0.00 | 32.32 | 4.30 |
2085 | 2734 | 3.418047 | ACAAGTATTTTTGGACGGAGGG | 58.582 | 45.455 | 0.00 | 0.00 | 32.32 | 4.30 |
2086 | 2735 | 3.073356 | ACAAGTATTTTTGGACGGAGGGA | 59.927 | 43.478 | 0.00 | 0.00 | 32.32 | 4.20 |
2087 | 2736 | 3.629142 | AGTATTTTTGGACGGAGGGAG | 57.371 | 47.619 | 0.00 | 0.00 | 0.00 | 4.30 |
2088 | 2737 | 2.910977 | AGTATTTTTGGACGGAGGGAGT | 59.089 | 45.455 | 0.00 | 0.00 | 0.00 | 3.85 |
2089 | 2738 | 4.098894 | AGTATTTTTGGACGGAGGGAGTA | 58.901 | 43.478 | 0.00 | 0.00 | 0.00 | 2.59 |
2128 | 2777 | 6.519679 | TGCTGATCTATGTTTGCAATCTTT | 57.480 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
2257 | 2906 | 2.542020 | TCGAAGTTCAATCACTGGCA | 57.458 | 45.000 | 3.32 | 0.00 | 0.00 | 4.92 |
2417 | 3066 | 3.715628 | ACAATTGCTGGTGTGACTTTC | 57.284 | 42.857 | 5.05 | 0.00 | 0.00 | 2.62 |
2729 | 3414 | 2.608467 | GCAAGGATGCGAGAATATGC | 57.392 | 50.000 | 0.00 | 0.00 | 43.83 | 3.14 |
2807 | 3492 | 6.154203 | TGTTGATTTGGCATGTTCAACTAA | 57.846 | 33.333 | 25.06 | 12.64 | 45.12 | 2.24 |
3215 | 4173 | 6.015772 | GCTTTATCCCAAACCTACAGAAAACA | 60.016 | 38.462 | 0.00 | 0.00 | 0.00 | 2.83 |
3227 | 4185 | 6.375455 | ACCTACAGAAAACATAGGCAAGAATG | 59.625 | 38.462 | 0.00 | 0.00 | 39.36 | 2.67 |
3324 | 4282 | 9.797642 | TTTATATCTTCTGCCATGATGTTATGT | 57.202 | 29.630 | 0.00 | 0.00 | 0.00 | 2.29 |
3395 | 4363 | 2.092699 | GGAATAGCTTGCCACTTCCTCT | 60.093 | 50.000 | 0.00 | 0.00 | 33.98 | 3.69 |
3596 | 4576 | 9.686683 | AATAGGCTTCATATTACTTTGTTCAGT | 57.313 | 29.630 | 0.00 | 0.00 | 0.00 | 3.41 |
3765 | 4745 | 2.484770 | GGTGAAACTGTACAGCCTGACA | 60.485 | 50.000 | 22.90 | 12.61 | 36.74 | 3.58 |
3812 | 4792 | 5.070446 | TGTTCACAACATCTACTTCTGGAGT | 59.930 | 40.000 | 0.00 | 0.00 | 38.24 | 3.85 |
3870 | 4850 | 1.376424 | AACGACCCAGAGCATGCAG | 60.376 | 57.895 | 21.98 | 9.16 | 0.00 | 4.41 |
3886 | 4866 | 4.082245 | GCATGCAGCCTTTTTAGAGGTAAA | 60.082 | 41.667 | 14.21 | 0.00 | 39.11 | 2.01 |
4165 | 5149 | 8.621286 | CGCTTAAAAGTTATTAGGAATCACCAT | 58.379 | 33.333 | 0.00 | 0.00 | 42.04 | 3.55 |
4585 | 5926 | 6.425577 | TGTTATAGGTTTTGATTACCGTGC | 57.574 | 37.500 | 0.00 | 0.00 | 40.69 | 5.34 |
4726 | 6083 | 1.067283 | CGCTTCAGTGATGGTGTCTCT | 60.067 | 52.381 | 8.02 | 0.00 | 0.00 | 3.10 |
4727 | 6084 | 2.611473 | CGCTTCAGTGATGGTGTCTCTT | 60.611 | 50.000 | 8.02 | 0.00 | 0.00 | 2.85 |
4768 | 6125 | 5.825679 | GCAATGGTCCCAGTTAATACATACA | 59.174 | 40.000 | 0.00 | 0.00 | 0.00 | 2.29 |
4769 | 6126 | 6.490040 | GCAATGGTCCCAGTTAATACATACAT | 59.510 | 38.462 | 0.00 | 0.00 | 0.00 | 2.29 |
4770 | 6127 | 7.663905 | GCAATGGTCCCAGTTAATACATACATA | 59.336 | 37.037 | 0.00 | 0.00 | 0.00 | 2.29 |
4771 | 6128 | 9.567776 | CAATGGTCCCAGTTAATACATACATAA | 57.432 | 33.333 | 0.00 | 0.00 | 0.00 | 1.90 |
4772 | 6129 | 9.793259 | AATGGTCCCAGTTAATACATACATAAG | 57.207 | 33.333 | 0.00 | 0.00 | 0.00 | 1.73 |
4776 | 6397 | 7.387948 | GTCCCAGTTAATACATACATAAGCCAG | 59.612 | 40.741 | 0.00 | 0.00 | 0.00 | 4.85 |
4779 | 6400 | 7.224297 | CAGTTAATACATACATAAGCCAGGGT | 58.776 | 38.462 | 0.00 | 0.00 | 0.00 | 4.34 |
4789 | 6410 | 2.271944 | AAGCCAGGGTTGTGTTAGTC | 57.728 | 50.000 | 2.08 | 0.00 | 0.00 | 2.59 |
4827 | 6449 | 9.646427 | TTTTTGGCCATTAGTTACACATATTTC | 57.354 | 29.630 | 6.09 | 0.00 | 0.00 | 2.17 |
4973 | 6596 | 2.700897 | GCTTTATCAGCTACTCCCTCCA | 59.299 | 50.000 | 0.00 | 0.00 | 46.27 | 3.86 |
4981 | 6604 | 2.250273 | AGCTACTCCCTCCATTCCCTAA | 59.750 | 50.000 | 0.00 | 0.00 | 0.00 | 2.69 |
4982 | 6605 | 3.116159 | AGCTACTCCCTCCATTCCCTAAT | 60.116 | 47.826 | 0.00 | 0.00 | 0.00 | 1.73 |
5022 | 6645 | 7.782049 | AGAGATTTCAATACGGACTACATTCA | 58.218 | 34.615 | 0.00 | 0.00 | 0.00 | 2.57 |
5059 | 6682 | 9.517609 | GACGTATTTTAGAGTGTAGATTCATGT | 57.482 | 33.333 | 0.00 | 0.00 | 0.00 | 3.21 |
5120 | 6743 | 8.959705 | AAAAGGACTTATATTTAGGAACGGAG | 57.040 | 34.615 | 0.00 | 0.00 | 0.00 | 4.63 |
5135 | 6758 | 5.055144 | GGAACGGAGGGAGTATATTTTGTC | 58.945 | 45.833 | 0.00 | 0.00 | 0.00 | 3.18 |
5160 | 6800 | 4.749245 | ACTCCTTTGTTGTTGCTTATCG | 57.251 | 40.909 | 0.00 | 0.00 | 0.00 | 2.92 |
5197 | 6837 | 6.804677 | TGTTGGTCTTACTCGTAACACTTTA | 58.195 | 36.000 | 0.00 | 0.00 | 0.00 | 1.85 |
5214 | 6858 | 7.246674 | ACACTTTATGTTCGGCTATGTTATG | 57.753 | 36.000 | 0.00 | 0.00 | 38.98 | 1.90 |
5595 | 7242 | 1.270839 | TGAAAACTCTGCTCCTTCGGG | 60.271 | 52.381 | 0.00 | 0.00 | 0.00 | 5.14 |
5600 | 7247 | 1.063567 | ACTCTGCTCCTTCGGGTATCT | 60.064 | 52.381 | 0.00 | 0.00 | 36.28 | 1.98 |
5604 | 7251 | 1.215673 | TGCTCCTTCGGGTATCTCTCT | 59.784 | 52.381 | 0.00 | 0.00 | 36.28 | 3.10 |
5635 | 7282 | 0.244994 | CTTCTAGCACTGCGACCACT | 59.755 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
5701 | 7348 | 1.556911 | TCTCTCCAGATCAGGTTTGCC | 59.443 | 52.381 | 3.80 | 0.00 | 0.00 | 4.52 |
5768 | 7417 | 4.373116 | ACGTGCGGGCGTTCATCT | 62.373 | 61.111 | 0.00 | 0.00 | 43.04 | 2.90 |
5893 | 7548 | 2.428530 | CAACTCGGTGATCATCCAGAGA | 59.571 | 50.000 | 24.56 | 10.28 | 33.42 | 3.10 |
5894 | 7549 | 2.305928 | ACTCGGTGATCATCCAGAGAG | 58.694 | 52.381 | 24.56 | 17.83 | 33.42 | 3.20 |
5900 | 7555 | 4.023279 | CGGTGATCATCCAGAGAGTCTAAG | 60.023 | 50.000 | 0.00 | 0.00 | 0.00 | 2.18 |
5904 | 7559 | 3.210227 | TCATCCAGAGAGTCTAAGCTCG | 58.790 | 50.000 | 0.00 | 0.00 | 40.26 | 5.03 |
5907 | 7562 | 1.329292 | CCAGAGAGTCTAAGCTCGACG | 59.671 | 57.143 | 9.62 | 0.00 | 40.26 | 5.12 |
5915 | 7570 | 0.454600 | CTAAGCTCGACGGGCTGTTA | 59.545 | 55.000 | 25.41 | 12.09 | 40.19 | 2.41 |
5926 | 7581 | 2.030958 | GGCTGTTAACCCCACGTCG | 61.031 | 63.158 | 2.48 | 0.00 | 0.00 | 5.12 |
5936 | 7591 | 2.297912 | CCCACGTCGTCGAACACAC | 61.298 | 63.158 | 9.47 | 0.00 | 40.62 | 3.82 |
5937 | 7592 | 2.297912 | CCACGTCGTCGAACACACC | 61.298 | 63.158 | 9.47 | 0.00 | 40.62 | 4.16 |
5938 | 7593 | 1.586826 | CACGTCGTCGAACACACCA | 60.587 | 57.895 | 9.47 | 0.00 | 40.62 | 4.17 |
5939 | 7594 | 0.937699 | CACGTCGTCGAACACACCAT | 60.938 | 55.000 | 9.47 | 0.00 | 40.62 | 3.55 |
5957 | 7612 | 0.767375 | ATCCATCCATCCGTCCCAAG | 59.233 | 55.000 | 0.00 | 0.00 | 0.00 | 3.61 |
6006 | 7662 | 2.114616 | TCCCTGAGCTCTCTTGGATTC | 58.885 | 52.381 | 16.19 | 0.00 | 0.00 | 2.52 |
6011 | 7667 | 3.638160 | CTGAGCTCTCTTGGATTCTAGCT | 59.362 | 47.826 | 16.19 | 0.00 | 42.70 | 3.32 |
6050 | 7706 | 1.918800 | ACTTCACTAGCCGCCCCTT | 60.919 | 57.895 | 0.00 | 0.00 | 0.00 | 3.95 |
6193 | 7856 | 1.403679 | TGTTGGCAGTCCTTTTGTTCG | 59.596 | 47.619 | 0.00 | 0.00 | 0.00 | 3.95 |
6205 | 7868 | 2.600470 | TTTGTTCGGTGTCTAACGGT | 57.400 | 45.000 | 0.00 | 0.00 | 0.00 | 4.83 |
6220 | 7883 | 2.586293 | CGGTCCCTTTGGTACGGGT | 61.586 | 63.158 | 3.77 | 0.00 | 41.40 | 5.28 |
6366 | 8030 | 1.070758 | GGCAGTGTCTCTTTCTGACCA | 59.929 | 52.381 | 0.00 | 0.00 | 31.71 | 4.02 |
6367 | 8031 | 2.411904 | GCAGTGTCTCTTTCTGACCAG | 58.588 | 52.381 | 0.00 | 0.00 | 33.83 | 4.00 |
6376 | 8041 | 2.106511 | TCTTTCTGACCAGGGGTTTCAG | 59.893 | 50.000 | 0.00 | 0.00 | 35.25 | 3.02 |
6394 | 8059 | 8.803235 | GGGTTTCAGGAGTTATTACAAGAAAAT | 58.197 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
6454 | 8120 | 1.234615 | ACATTTTCCTGTCACGGCGG | 61.235 | 55.000 | 13.24 | 0.00 | 0.00 | 6.13 |
6478 | 8144 | 4.380867 | CCTCACTTTTCTGTGCAAGTGTTT | 60.381 | 41.667 | 12.42 | 0.00 | 46.76 | 2.83 |
6534 | 8200 | 1.212751 | GGGAACAACATTCCTGCGC | 59.787 | 57.895 | 0.00 | 0.00 | 38.61 | 6.09 |
6553 | 8219 | 1.677217 | GCTGAGAAGTCGGAGGCAAAT | 60.677 | 52.381 | 0.00 | 0.00 | 0.00 | 2.32 |
6608 | 8274 | 3.897141 | TTTTTGTCAAAAGGGACCACC | 57.103 | 42.857 | 10.50 | 0.00 | 36.97 | 4.61 |
6619 | 8285 | 2.826702 | GACCACCTGTCCAACGGT | 59.173 | 61.111 | 0.00 | 0.00 | 38.09 | 4.83 |
6620 | 8286 | 2.051941 | GACCACCTGTCCAACGGTA | 58.948 | 57.895 | 0.00 | 0.00 | 38.09 | 4.02 |
6621 | 8287 | 0.611714 | GACCACCTGTCCAACGGTAT | 59.388 | 55.000 | 0.00 | 0.00 | 38.09 | 2.73 |
6622 | 8288 | 1.002773 | GACCACCTGTCCAACGGTATT | 59.997 | 52.381 | 0.00 | 0.00 | 38.09 | 1.89 |
6623 | 8289 | 1.271163 | ACCACCTGTCCAACGGTATTG | 60.271 | 52.381 | 0.00 | 0.00 | 30.91 | 1.90 |
6624 | 8290 | 1.002659 | CCACCTGTCCAACGGTATTGA | 59.997 | 52.381 | 0.00 | 0.00 | 30.91 | 2.57 |
6625 | 8291 | 2.073816 | CACCTGTCCAACGGTATTGAC | 58.926 | 52.381 | 0.00 | 0.00 | 30.91 | 3.18 |
6626 | 8292 | 1.695242 | ACCTGTCCAACGGTATTGACA | 59.305 | 47.619 | 6.99 | 6.99 | 0.00 | 3.58 |
6627 | 8293 | 2.105134 | ACCTGTCCAACGGTATTGACAA | 59.895 | 45.455 | 8.15 | 0.00 | 0.00 | 3.18 |
6628 | 8294 | 3.142951 | CCTGTCCAACGGTATTGACAAA | 58.857 | 45.455 | 0.00 | 0.00 | 0.00 | 2.83 |
6629 | 8295 | 3.566322 | CCTGTCCAACGGTATTGACAAAA | 59.434 | 43.478 | 0.00 | 0.00 | 0.00 | 2.44 |
6630 | 8296 | 4.036971 | CCTGTCCAACGGTATTGACAAAAA | 59.963 | 41.667 | 0.00 | 0.00 | 0.00 | 1.94 |
6648 | 8314 | 4.391683 | AAAAAGACCCCTTCCGGATAAA | 57.608 | 40.909 | 4.15 | 0.00 | 0.00 | 1.40 |
6649 | 8315 | 4.391683 | AAAAGACCCCTTCCGGATAAAA | 57.608 | 40.909 | 4.15 | 0.00 | 0.00 | 1.52 |
6650 | 8316 | 4.603094 | AAAGACCCCTTCCGGATAAAAT | 57.397 | 40.909 | 4.15 | 0.00 | 0.00 | 1.82 |
6651 | 8317 | 4.603094 | AAGACCCCTTCCGGATAAAATT | 57.397 | 40.909 | 4.15 | 0.00 | 0.00 | 1.82 |
6652 | 8318 | 3.898482 | AGACCCCTTCCGGATAAAATTG | 58.102 | 45.455 | 4.15 | 0.00 | 0.00 | 2.32 |
6653 | 8319 | 2.956333 | GACCCCTTCCGGATAAAATTGG | 59.044 | 50.000 | 4.15 | 1.91 | 0.00 | 3.16 |
6654 | 8320 | 1.686587 | CCCCTTCCGGATAAAATTGGC | 59.313 | 52.381 | 4.15 | 0.00 | 0.00 | 4.52 |
6655 | 8321 | 2.383855 | CCCTTCCGGATAAAATTGGCA | 58.616 | 47.619 | 4.15 | 0.00 | 0.00 | 4.92 |
6656 | 8322 | 2.763448 | CCCTTCCGGATAAAATTGGCAA | 59.237 | 45.455 | 4.15 | 0.68 | 0.00 | 4.52 |
6657 | 8323 | 3.196685 | CCCTTCCGGATAAAATTGGCAAA | 59.803 | 43.478 | 4.15 | 0.00 | 0.00 | 3.68 |
6658 | 8324 | 4.323104 | CCCTTCCGGATAAAATTGGCAAAA | 60.323 | 41.667 | 4.15 | 0.00 | 0.00 | 2.44 |
6659 | 8325 | 5.241662 | CCTTCCGGATAAAATTGGCAAAAA | 58.758 | 37.500 | 4.15 | 0.00 | 0.00 | 1.94 |
6677 | 8343 | 3.751479 | AAAAGACCCTTGAAACATGGC | 57.249 | 42.857 | 0.00 | 0.00 | 0.00 | 4.40 |
6678 | 8344 | 1.247567 | AAGACCCTTGAAACATGGCG | 58.752 | 50.000 | 0.00 | 0.00 | 0.00 | 5.69 |
6679 | 8345 | 0.400213 | AGACCCTTGAAACATGGCGA | 59.600 | 50.000 | 0.00 | 0.00 | 0.00 | 5.54 |
6680 | 8346 | 0.521735 | GACCCTTGAAACATGGCGAC | 59.478 | 55.000 | 0.00 | 0.00 | 0.00 | 5.19 |
6741 | 8407 | 4.849310 | GCGGCGGGCCACAGATTA | 62.849 | 66.667 | 9.78 | 0.00 | 35.37 | 1.75 |
6742 | 8408 | 2.895372 | CGGCGGGCCACAGATTAC | 60.895 | 66.667 | 4.39 | 0.00 | 35.37 | 1.89 |
6743 | 8409 | 2.895372 | GGCGGGCCACAGATTACG | 60.895 | 66.667 | 4.39 | 0.00 | 35.81 | 3.18 |
6744 | 8410 | 2.895372 | GCGGGCCACAGATTACGG | 60.895 | 66.667 | 4.39 | 0.00 | 0.00 | 4.02 |
6745 | 8411 | 2.582436 | CGGGCCACAGATTACGGT | 59.418 | 61.111 | 4.39 | 0.00 | 0.00 | 4.83 |
6746 | 8412 | 1.813753 | CGGGCCACAGATTACGGTG | 60.814 | 63.158 | 4.39 | 0.00 | 40.76 | 4.94 |
6747 | 8413 | 2.112815 | GGGCCACAGATTACGGTGC | 61.113 | 63.158 | 4.39 | 0.00 | 40.00 | 5.01 |
6748 | 8414 | 1.376683 | GGCCACAGATTACGGTGCA | 60.377 | 57.895 | 0.00 | 0.00 | 40.00 | 4.57 |
6749 | 8415 | 0.958382 | GGCCACAGATTACGGTGCAA | 60.958 | 55.000 | 0.00 | 0.00 | 40.00 | 4.08 |
6750 | 8416 | 0.168128 | GCCACAGATTACGGTGCAAC | 59.832 | 55.000 | 0.00 | 0.00 | 40.00 | 4.17 |
6751 | 8417 | 1.518325 | CCACAGATTACGGTGCAACA | 58.482 | 50.000 | 0.98 | 0.00 | 40.00 | 3.33 |
6752 | 8418 | 1.196808 | CCACAGATTACGGTGCAACAC | 59.803 | 52.381 | 0.98 | 0.00 | 40.00 | 3.32 |
6753 | 8419 | 2.143122 | CACAGATTACGGTGCAACACT | 58.857 | 47.619 | 0.98 | 0.00 | 39.98 | 3.55 |
6754 | 8420 | 2.096268 | CACAGATTACGGTGCAACACTG | 60.096 | 50.000 | 0.98 | 5.02 | 45.33 | 3.66 |
6755 | 8421 | 1.464608 | CAGATTACGGTGCAACACTGG | 59.535 | 52.381 | 0.98 | 0.00 | 44.25 | 4.00 |
6756 | 8422 | 0.168128 | GATTACGGTGCAACACTGGC | 59.832 | 55.000 | 0.98 | 0.00 | 44.25 | 4.85 |
6757 | 8423 | 1.573829 | ATTACGGTGCAACACTGGCG | 61.574 | 55.000 | 0.98 | 2.91 | 44.25 | 5.69 |
6760 | 8426 | 3.898509 | GGTGCAACACTGGCGCAA | 61.899 | 61.111 | 10.83 | 0.00 | 43.32 | 4.85 |
6761 | 8427 | 2.655044 | GTGCAACACTGGCGCAAC | 60.655 | 61.111 | 10.83 | 0.00 | 41.27 | 4.17 |
6762 | 8428 | 3.136791 | TGCAACACTGGCGCAACA | 61.137 | 55.556 | 10.83 | 0.00 | 31.46 | 3.33 |
6763 | 8429 | 2.353839 | GCAACACTGGCGCAACAG | 60.354 | 61.111 | 10.83 | 11.25 | 44.03 | 3.16 |
6764 | 8430 | 2.833533 | GCAACACTGGCGCAACAGA | 61.834 | 57.895 | 18.81 | 0.00 | 40.97 | 3.41 |
6765 | 8431 | 1.726865 | CAACACTGGCGCAACAGAA | 59.273 | 52.632 | 18.81 | 0.00 | 40.97 | 3.02 |
6766 | 8432 | 0.592247 | CAACACTGGCGCAACAGAAC | 60.592 | 55.000 | 18.81 | 0.00 | 40.97 | 3.01 |
6767 | 8433 | 2.047151 | AACACTGGCGCAACAGAACG | 62.047 | 55.000 | 18.81 | 9.80 | 40.97 | 3.95 |
6768 | 8434 | 2.972505 | ACTGGCGCAACAGAACGG | 60.973 | 61.111 | 18.81 | 2.91 | 40.97 | 4.44 |
6769 | 8435 | 2.972505 | CTGGCGCAACAGAACGGT | 60.973 | 61.111 | 10.83 | 0.00 | 40.97 | 4.83 |
6770 | 8436 | 3.240606 | CTGGCGCAACAGAACGGTG | 62.241 | 63.158 | 10.83 | 0.00 | 40.97 | 4.94 |
6771 | 8437 | 3.276846 | GGCGCAACAGAACGGTGT | 61.277 | 61.111 | 10.83 | 0.00 | 0.00 | 4.16 |
6772 | 8438 | 2.052237 | GCGCAACAGAACGGTGTG | 60.052 | 61.111 | 0.30 | 0.00 | 0.00 | 3.82 |
6773 | 8439 | 2.819552 | GCGCAACAGAACGGTGTGT | 61.820 | 57.895 | 0.30 | 0.00 | 31.21 | 3.72 |
6774 | 8440 | 1.719117 | CGCAACAGAACGGTGTGTT | 59.281 | 52.632 | 10.66 | 10.66 | 41.69 | 3.32 |
6777 | 8443 | 2.788515 | AACAGAACGGTGTGTTGGG | 58.211 | 52.632 | 16.05 | 0.00 | 39.62 | 4.12 |
6778 | 8444 | 0.750182 | AACAGAACGGTGTGTTGGGG | 60.750 | 55.000 | 16.05 | 0.00 | 39.62 | 4.96 |
6779 | 8445 | 1.153046 | CAGAACGGTGTGTTGGGGT | 60.153 | 57.895 | 0.00 | 0.00 | 42.09 | 4.95 |
6780 | 8446 | 1.153046 | AGAACGGTGTGTTGGGGTG | 60.153 | 57.895 | 0.00 | 0.00 | 42.09 | 4.61 |
6781 | 8447 | 2.124067 | AACGGTGTGTTGGGGTGG | 60.124 | 61.111 | 0.00 | 0.00 | 40.00 | 4.61 |
6782 | 8448 | 3.724826 | AACGGTGTGTTGGGGTGGG | 62.725 | 63.158 | 0.00 | 0.00 | 40.00 | 4.61 |
6815 | 8481 | 3.058160 | GAGCTGGCGGCATGTGTT | 61.058 | 61.111 | 22.28 | 0.00 | 44.79 | 3.32 |
6816 | 8482 | 3.332493 | GAGCTGGCGGCATGTGTTG | 62.332 | 63.158 | 22.28 | 0.00 | 44.79 | 3.33 |
6817 | 8483 | 3.673484 | GCTGGCGGCATGTGTTGT | 61.673 | 61.111 | 13.85 | 0.00 | 41.35 | 3.32 |
6818 | 8484 | 2.256158 | CTGGCGGCATGTGTTGTG | 59.744 | 61.111 | 13.85 | 0.00 | 0.00 | 3.33 |
6819 | 8485 | 3.902162 | CTGGCGGCATGTGTTGTGC | 62.902 | 63.158 | 13.85 | 0.00 | 41.78 | 4.57 |
6825 | 8491 | 4.325304 | CATGTGTTGTGCCGCGCA | 62.325 | 61.111 | 8.75 | 1.51 | 35.60 | 6.09 |
6840 | 8506 | 4.314440 | GCACGTGACTGCCCCTCA | 62.314 | 66.667 | 22.23 | 0.00 | 0.00 | 3.86 |
6841 | 8507 | 2.665000 | CACGTGACTGCCCCTCAT | 59.335 | 61.111 | 10.90 | 0.00 | 0.00 | 2.90 |
6842 | 8508 | 1.448540 | CACGTGACTGCCCCTCATC | 60.449 | 63.158 | 10.90 | 0.00 | 0.00 | 2.92 |
6843 | 8509 | 2.202797 | CGTGACTGCCCCTCATCG | 60.203 | 66.667 | 0.00 | 0.00 | 0.00 | 3.84 |
6844 | 8510 | 2.982130 | GTGACTGCCCCTCATCGT | 59.018 | 61.111 | 0.00 | 0.00 | 0.00 | 3.73 |
6845 | 8511 | 1.296715 | GTGACTGCCCCTCATCGTT | 59.703 | 57.895 | 0.00 | 0.00 | 0.00 | 3.85 |
6846 | 8512 | 0.321653 | GTGACTGCCCCTCATCGTTT | 60.322 | 55.000 | 0.00 | 0.00 | 0.00 | 3.60 |
6847 | 8513 | 0.400213 | TGACTGCCCCTCATCGTTTT | 59.600 | 50.000 | 0.00 | 0.00 | 0.00 | 2.43 |
6848 | 8514 | 1.087501 | GACTGCCCCTCATCGTTTTC | 58.912 | 55.000 | 0.00 | 0.00 | 0.00 | 2.29 |
6849 | 8515 | 0.693049 | ACTGCCCCTCATCGTTTTCT | 59.307 | 50.000 | 0.00 | 0.00 | 0.00 | 2.52 |
6850 | 8516 | 1.089920 | CTGCCCCTCATCGTTTTCTG | 58.910 | 55.000 | 0.00 | 0.00 | 0.00 | 3.02 |
6851 | 8517 | 0.400213 | TGCCCCTCATCGTTTTCTGT | 59.600 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
6852 | 8518 | 1.087501 | GCCCCTCATCGTTTTCTGTC | 58.912 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
6853 | 8519 | 1.739067 | CCCCTCATCGTTTTCTGTCC | 58.261 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
6854 | 8520 | 1.679032 | CCCCTCATCGTTTTCTGTCCC | 60.679 | 57.143 | 0.00 | 0.00 | 0.00 | 4.46 |
6855 | 8521 | 1.279271 | CCCTCATCGTTTTCTGTCCCT | 59.721 | 52.381 | 0.00 | 0.00 | 0.00 | 4.20 |
6856 | 8522 | 2.350522 | CCTCATCGTTTTCTGTCCCTG | 58.649 | 52.381 | 0.00 | 0.00 | 0.00 | 4.45 |
6857 | 8523 | 1.734465 | CTCATCGTTTTCTGTCCCTGC | 59.266 | 52.381 | 0.00 | 0.00 | 0.00 | 4.85 |
6858 | 8524 | 0.443869 | CATCGTTTTCTGTCCCTGCG | 59.556 | 55.000 | 0.00 | 0.00 | 0.00 | 5.18 |
6859 | 8525 | 1.298859 | ATCGTTTTCTGTCCCTGCGC | 61.299 | 55.000 | 0.00 | 0.00 | 0.00 | 6.09 |
6860 | 8526 | 2.556287 | GTTTTCTGTCCCTGCGCG | 59.444 | 61.111 | 0.00 | 0.00 | 0.00 | 6.86 |
6861 | 8527 | 1.959226 | GTTTTCTGTCCCTGCGCGA | 60.959 | 57.895 | 12.10 | 0.00 | 0.00 | 5.87 |
6862 | 8528 | 1.003839 | TTTTCTGTCCCTGCGCGAT | 60.004 | 52.632 | 12.10 | 0.00 | 0.00 | 4.58 |
6863 | 8529 | 0.605319 | TTTTCTGTCCCTGCGCGATT | 60.605 | 50.000 | 12.10 | 0.00 | 0.00 | 3.34 |
6864 | 8530 | 1.298157 | TTTCTGTCCCTGCGCGATTG | 61.298 | 55.000 | 12.10 | 0.00 | 0.00 | 2.67 |
6865 | 8531 | 2.434884 | CTGTCCCTGCGCGATTGT | 60.435 | 61.111 | 12.10 | 0.00 | 0.00 | 2.71 |
6866 | 8532 | 1.153647 | CTGTCCCTGCGCGATTGTA | 60.154 | 57.895 | 12.10 | 0.00 | 0.00 | 2.41 |
6867 | 8533 | 1.148157 | CTGTCCCTGCGCGATTGTAG | 61.148 | 60.000 | 12.10 | 0.00 | 0.00 | 2.74 |
6868 | 8534 | 2.202878 | TCCCTGCGCGATTGTAGC | 60.203 | 61.111 | 12.10 | 0.00 | 0.00 | 3.58 |
6869 | 8535 | 2.202932 | CCCTGCGCGATTGTAGCT | 60.203 | 61.111 | 12.10 | 0.00 | 0.00 | 3.32 |
6870 | 8536 | 1.815421 | CCCTGCGCGATTGTAGCTT | 60.815 | 57.895 | 12.10 | 0.00 | 0.00 | 3.74 |
6871 | 8537 | 1.349627 | CCTGCGCGATTGTAGCTTG | 59.650 | 57.895 | 12.10 | 0.00 | 0.00 | 4.01 |
6872 | 8538 | 1.361668 | CCTGCGCGATTGTAGCTTGT | 61.362 | 55.000 | 12.10 | 0.00 | 0.00 | 3.16 |
6873 | 8539 | 1.277326 | CTGCGCGATTGTAGCTTGTA | 58.723 | 50.000 | 12.10 | 0.00 | 0.00 | 2.41 |
6874 | 8540 | 0.996462 | TGCGCGATTGTAGCTTGTAC | 59.004 | 50.000 | 12.10 | 0.00 | 0.00 | 2.90 |
6875 | 8541 | 0.996462 | GCGCGATTGTAGCTTGTACA | 59.004 | 50.000 | 12.10 | 0.00 | 0.00 | 2.90 |
6876 | 8542 | 1.266891 | GCGCGATTGTAGCTTGTACAC | 60.267 | 52.381 | 12.10 | 0.00 | 0.00 | 2.90 |
6877 | 8543 | 1.007422 | CGCGATTGTAGCTTGTACACG | 60.007 | 52.381 | 0.00 | 0.00 | 0.00 | 4.49 |
6878 | 8544 | 2.256174 | GCGATTGTAGCTTGTACACGA | 58.744 | 47.619 | 3.09 | 0.00 | 0.00 | 4.35 |
6879 | 8545 | 2.027688 | GCGATTGTAGCTTGTACACGAC | 59.972 | 50.000 | 3.09 | 0.00 | 0.00 | 4.34 |
6880 | 8546 | 3.499048 | CGATTGTAGCTTGTACACGACT | 58.501 | 45.455 | 3.09 | 2.92 | 0.00 | 4.18 |
6881 | 8547 | 4.655027 | CGATTGTAGCTTGTACACGACTA | 58.345 | 43.478 | 3.09 | 1.99 | 0.00 | 2.59 |
6882 | 8548 | 4.729086 | CGATTGTAGCTTGTACACGACTAG | 59.271 | 45.833 | 3.09 | 0.00 | 34.39 | 2.57 |
6883 | 8549 | 5.446875 | CGATTGTAGCTTGTACACGACTAGA | 60.447 | 44.000 | 3.09 | 0.85 | 33.18 | 2.43 |
6884 | 8550 | 5.892160 | TTGTAGCTTGTACACGACTAGAT | 57.108 | 39.130 | 3.09 | 0.00 | 33.18 | 1.98 |
6885 | 8551 | 6.990341 | TTGTAGCTTGTACACGACTAGATA | 57.010 | 37.500 | 3.09 | 0.00 | 33.18 | 1.98 |
6886 | 8552 | 7.563888 | TTGTAGCTTGTACACGACTAGATAT | 57.436 | 36.000 | 3.09 | 0.00 | 34.92 | 1.63 |
6887 | 8553 | 6.956047 | TGTAGCTTGTACACGACTAGATATG | 58.044 | 40.000 | 3.09 | 0.00 | 34.92 | 1.78 |
6888 | 8554 | 6.541278 | TGTAGCTTGTACACGACTAGATATGT | 59.459 | 38.462 | 3.09 | 0.00 | 34.92 | 2.29 |
6889 | 8555 | 6.452494 | AGCTTGTACACGACTAGATATGTT | 57.548 | 37.500 | 3.09 | 0.00 | 33.18 | 2.71 |
6890 | 8556 | 6.864342 | AGCTTGTACACGACTAGATATGTTT | 58.136 | 36.000 | 3.09 | 0.00 | 33.18 | 2.83 |
6891 | 8557 | 6.752351 | AGCTTGTACACGACTAGATATGTTTG | 59.248 | 38.462 | 3.09 | 0.00 | 33.18 | 2.93 |
6892 | 8558 | 6.530534 | GCTTGTACACGACTAGATATGTTTGT | 59.469 | 38.462 | 3.09 | 0.00 | 33.18 | 2.83 |
6893 | 8559 | 7.063074 | GCTTGTACACGACTAGATATGTTTGTT | 59.937 | 37.037 | 3.09 | 0.00 | 33.18 | 2.83 |
6894 | 8560 | 8.456904 | TTGTACACGACTAGATATGTTTGTTC | 57.543 | 34.615 | 0.00 | 0.00 | 0.00 | 3.18 |
6895 | 8561 | 7.595604 | TGTACACGACTAGATATGTTTGTTCA | 58.404 | 34.615 | 0.00 | 0.00 | 0.00 | 3.18 |
6896 | 8562 | 8.248253 | TGTACACGACTAGATATGTTTGTTCAT | 58.752 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
6897 | 8563 | 9.084164 | GTACACGACTAGATATGTTTGTTCATT | 57.916 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
6899 | 8565 | 9.647797 | ACACGACTAGATATGTTTGTTCATTAA | 57.352 | 29.630 | 0.00 | 0.00 | 0.00 | 1.40 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
2 | 3 | 3.010420 | AGAAAGGACGAGCAATTTAGGC | 58.990 | 45.455 | 0.00 | 0.00 | 0.00 | 3.93 |
3 | 4 | 6.737254 | TTAAGAAAGGACGAGCAATTTAGG | 57.263 | 37.500 | 0.00 | 0.00 | 0.00 | 2.69 |
4 | 5 | 9.065871 | CAAATTAAGAAAGGACGAGCAATTTAG | 57.934 | 33.333 | 0.00 | 0.00 | 0.00 | 1.85 |
6 | 7 | 7.657336 | TCAAATTAAGAAAGGACGAGCAATTT | 58.343 | 30.769 | 0.00 | 0.00 | 0.00 | 1.82 |
8 | 9 | 6.817765 | TCAAATTAAGAAAGGACGAGCAAT | 57.182 | 33.333 | 0.00 | 0.00 | 0.00 | 3.56 |
9 | 10 | 6.349280 | CCATCAAATTAAGAAAGGACGAGCAA | 60.349 | 38.462 | 0.00 | 0.00 | 0.00 | 3.91 |
10 | 11 | 5.123820 | CCATCAAATTAAGAAAGGACGAGCA | 59.876 | 40.000 | 0.00 | 0.00 | 0.00 | 4.26 |
11 | 12 | 5.354234 | TCCATCAAATTAAGAAAGGACGAGC | 59.646 | 40.000 | 0.00 | 0.00 | 0.00 | 5.03 |
12 | 13 | 6.985188 | TCCATCAAATTAAGAAAGGACGAG | 57.015 | 37.500 | 0.00 | 0.00 | 0.00 | 4.18 |
13 | 14 | 7.280876 | CAGATCCATCAAATTAAGAAAGGACGA | 59.719 | 37.037 | 0.00 | 0.00 | 0.00 | 4.20 |
14 | 15 | 7.066284 | ACAGATCCATCAAATTAAGAAAGGACG | 59.934 | 37.037 | 7.21 | 0.00 | 0.00 | 4.79 |
15 | 16 | 8.286191 | ACAGATCCATCAAATTAAGAAAGGAC | 57.714 | 34.615 | 7.21 | 4.10 | 0.00 | 3.85 |
20 | 21 | 7.065803 | GGACGAACAGATCCATCAAATTAAGAA | 59.934 | 37.037 | 0.00 | 0.00 | 34.87 | 2.52 |
29 | 30 | 1.134699 | GCAGGACGAACAGATCCATCA | 60.135 | 52.381 | 0.00 | 0.00 | 37.47 | 3.07 |
37 | 38 | 1.730501 | ATCATGTGCAGGACGAACAG | 58.269 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
39 | 40 | 4.332543 | TGATTTATCATGTGCAGGACGAAC | 59.667 | 41.667 | 0.00 | 0.00 | 0.00 | 3.95 |
42 | 43 | 3.002656 | GGTGATTTATCATGTGCAGGACG | 59.997 | 47.826 | 0.00 | 0.00 | 39.30 | 4.79 |
44 | 45 | 3.205338 | CGGTGATTTATCATGTGCAGGA | 58.795 | 45.455 | 0.00 | 0.00 | 39.30 | 3.86 |
45 | 46 | 2.945008 | ACGGTGATTTATCATGTGCAGG | 59.055 | 45.455 | 0.00 | 0.00 | 39.30 | 4.85 |
48 | 49 | 2.607635 | ACGACGGTGATTTATCATGTGC | 59.392 | 45.455 | 0.00 | 0.00 | 39.30 | 4.57 |
66 | 68 | 4.940654 | TGCATGATGGTTTTCTTATCACGA | 59.059 | 37.500 | 0.00 | 0.00 | 34.04 | 4.35 |
140 | 142 | 9.342308 | CATCTCTAATTTTTATGTTGCCCTCTA | 57.658 | 33.333 | 0.00 | 0.00 | 0.00 | 2.43 |
209 | 215 | 6.494842 | TCTCTTTTCAAAACATGGACTTTCG | 58.505 | 36.000 | 0.00 | 0.00 | 0.00 | 3.46 |
221 | 227 | 5.838521 | AGGTATTGCCCTTCTCTTTTCAAAA | 59.161 | 36.000 | 0.00 | 0.00 | 38.26 | 2.44 |
232 | 238 | 2.289565 | GTGCACTAGGTATTGCCCTTC | 58.710 | 52.381 | 10.32 | 0.00 | 38.00 | 3.46 |
237 | 243 | 5.201713 | TCTAGATGTGCACTAGGTATTGC | 57.798 | 43.478 | 19.41 | 0.00 | 38.19 | 3.56 |
238 | 244 | 8.923609 | CATATCTAGATGTGCACTAGGTATTG | 57.076 | 38.462 | 19.41 | 8.53 | 40.26 | 1.90 |
285 | 443 | 7.116736 | GGAAGGAGGGAGTACATTTTAATTGA | 58.883 | 38.462 | 0.00 | 0.00 | 0.00 | 2.57 |
286 | 444 | 6.321435 | GGGAAGGAGGGAGTACATTTTAATTG | 59.679 | 42.308 | 0.00 | 0.00 | 0.00 | 2.32 |
287 | 445 | 6.011096 | TGGGAAGGAGGGAGTACATTTTAATT | 60.011 | 38.462 | 0.00 | 0.00 | 0.00 | 1.40 |
299 | 457 | 5.635120 | CCTTATATTTTGGGAAGGAGGGAG | 58.365 | 45.833 | 0.00 | 0.00 | 40.88 | 4.30 |
300 | 458 | 4.141018 | GCCTTATATTTTGGGAAGGAGGGA | 60.141 | 45.833 | 3.71 | 0.00 | 40.88 | 4.20 |
301 | 459 | 4.152647 | GCCTTATATTTTGGGAAGGAGGG | 58.847 | 47.826 | 3.71 | 0.00 | 40.88 | 4.30 |
302 | 460 | 3.821033 | CGCCTTATATTTTGGGAAGGAGG | 59.179 | 47.826 | 3.71 | 0.00 | 40.88 | 4.30 |
303 | 461 | 3.253432 | GCGCCTTATATTTTGGGAAGGAG | 59.747 | 47.826 | 0.00 | 1.55 | 40.88 | 3.69 |
304 | 462 | 3.219281 | GCGCCTTATATTTTGGGAAGGA | 58.781 | 45.455 | 0.00 | 0.00 | 40.88 | 3.36 |
305 | 463 | 2.031157 | CGCGCCTTATATTTTGGGAAGG | 60.031 | 50.000 | 0.00 | 0.00 | 41.26 | 3.46 |
306 | 464 | 2.875933 | TCGCGCCTTATATTTTGGGAAG | 59.124 | 45.455 | 0.00 | 0.00 | 0.00 | 3.46 |
307 | 465 | 2.920524 | TCGCGCCTTATATTTTGGGAA | 58.079 | 42.857 | 0.00 | 0.00 | 0.00 | 3.97 |
308 | 466 | 2.623878 | TCGCGCCTTATATTTTGGGA | 57.376 | 45.000 | 0.00 | 0.00 | 0.00 | 4.37 |
309 | 467 | 3.252215 | TCAATCGCGCCTTATATTTTGGG | 59.748 | 43.478 | 0.00 | 0.00 | 0.00 | 4.12 |
310 | 468 | 4.024048 | AGTCAATCGCGCCTTATATTTTGG | 60.024 | 41.667 | 0.00 | 0.00 | 0.00 | 3.28 |
311 | 469 | 5.095691 | AGTCAATCGCGCCTTATATTTTG | 57.904 | 39.130 | 0.00 | 0.00 | 0.00 | 2.44 |
312 | 470 | 5.751243 | AAGTCAATCGCGCCTTATATTTT | 57.249 | 34.783 | 0.00 | 0.00 | 0.00 | 1.82 |
316 | 474 | 5.276489 | CGTAAAAAGTCAATCGCGCCTTATA | 60.276 | 40.000 | 0.00 | 0.00 | 0.00 | 0.98 |
318 | 476 | 3.181528 | CGTAAAAAGTCAATCGCGCCTTA | 60.182 | 43.478 | 0.00 | 0.00 | 0.00 | 2.69 |
319 | 477 | 2.412325 | CGTAAAAAGTCAATCGCGCCTT | 60.412 | 45.455 | 0.00 | 0.00 | 0.00 | 4.35 |
320 | 478 | 1.127951 | CGTAAAAAGTCAATCGCGCCT | 59.872 | 47.619 | 0.00 | 0.00 | 0.00 | 5.52 |
321 | 479 | 1.520368 | CGTAAAAAGTCAATCGCGCC | 58.480 | 50.000 | 0.00 | 0.00 | 0.00 | 6.53 |
323 | 481 | 2.410730 | AGACCGTAAAAAGTCAATCGCG | 59.589 | 45.455 | 0.00 | 0.00 | 35.38 | 5.87 |
326 | 484 | 6.305638 | GCATCAAAGACCGTAAAAAGTCAATC | 59.694 | 38.462 | 0.00 | 0.00 | 35.38 | 2.67 |
327 | 485 | 6.149633 | GCATCAAAGACCGTAAAAAGTCAAT | 58.850 | 36.000 | 0.00 | 0.00 | 35.38 | 2.57 |
328 | 486 | 5.066634 | TGCATCAAAGACCGTAAAAAGTCAA | 59.933 | 36.000 | 0.00 | 0.00 | 35.38 | 3.18 |
329 | 487 | 4.576873 | TGCATCAAAGACCGTAAAAAGTCA | 59.423 | 37.500 | 0.00 | 0.00 | 35.38 | 3.41 |
330 | 488 | 4.909880 | GTGCATCAAAGACCGTAAAAAGTC | 59.090 | 41.667 | 0.00 | 0.00 | 0.00 | 3.01 |
331 | 489 | 4.336993 | TGTGCATCAAAGACCGTAAAAAGT | 59.663 | 37.500 | 0.00 | 0.00 | 0.00 | 2.66 |
332 | 490 | 4.854399 | TGTGCATCAAAGACCGTAAAAAG | 58.146 | 39.130 | 0.00 | 0.00 | 0.00 | 2.27 |
333 | 491 | 4.902443 | TGTGCATCAAAGACCGTAAAAA | 57.098 | 36.364 | 0.00 | 0.00 | 0.00 | 1.94 |
334 | 492 | 4.336993 | AGTTGTGCATCAAAGACCGTAAAA | 59.663 | 37.500 | 0.00 | 0.00 | 37.81 | 1.52 |
337 | 495 | 3.120321 | AGTTGTGCATCAAAGACCGTA | 57.880 | 42.857 | 0.00 | 0.00 | 37.81 | 4.02 |
338 | 496 | 1.967319 | AGTTGTGCATCAAAGACCGT | 58.033 | 45.000 | 0.00 | 0.00 | 37.81 | 4.83 |
339 | 497 | 3.044986 | CAAAGTTGTGCATCAAAGACCG | 58.955 | 45.455 | 0.00 | 0.00 | 37.81 | 4.79 |
341 | 499 | 4.044426 | GGTCAAAGTTGTGCATCAAAGAC | 58.956 | 43.478 | 0.00 | 3.76 | 37.81 | 3.01 |
344 | 502 | 3.446873 | AGTGGTCAAAGTTGTGCATCAAA | 59.553 | 39.130 | 0.00 | 0.00 | 37.81 | 2.69 |
345 | 503 | 3.023119 | AGTGGTCAAAGTTGTGCATCAA | 58.977 | 40.909 | 0.00 | 0.00 | 0.00 | 2.57 |
346 | 504 | 2.653726 | AGTGGTCAAAGTTGTGCATCA | 58.346 | 42.857 | 0.00 | 0.00 | 0.00 | 3.07 |
347 | 505 | 4.829064 | TTAGTGGTCAAAGTTGTGCATC | 57.171 | 40.909 | 0.00 | 0.00 | 0.00 | 3.91 |
349 | 507 | 9.845740 | ATATATATTAGTGGTCAAAGTTGTGCA | 57.154 | 29.630 | 0.00 | 0.00 | 0.00 | 4.57 |
401 | 559 | 7.710044 | TGCAAGACAAATACAACAATGTCATTT | 59.290 | 29.630 | 7.42 | 0.00 | 43.53 | 2.32 |
403 | 561 | 6.747125 | TGCAAGACAAATACAACAATGTCAT | 58.253 | 32.000 | 7.42 | 0.00 | 43.53 | 3.06 |
405 | 563 | 7.462109 | TTTGCAAGACAAATACAACAATGTC | 57.538 | 32.000 | 0.00 | 0.00 | 43.35 | 3.06 |
408 | 566 | 6.047870 | TGCTTTGCAAGACAAATACAACAAT | 58.952 | 32.000 | 0.00 | 0.00 | 46.90 | 2.71 |
411 | 569 | 5.964887 | TTGCTTTGCAAGACAAATACAAC | 57.035 | 34.783 | 12.29 | 0.00 | 46.90 | 3.32 |
486 | 934 | 4.740268 | TCGTCGCACAACTTTGACTATAT | 58.260 | 39.130 | 0.00 | 0.00 | 0.00 | 0.86 |
493 | 941 | 1.332904 | GGTCTTCGTCGCACAACTTTG | 60.333 | 52.381 | 0.00 | 0.00 | 0.00 | 2.77 |
499 | 947 | 0.103390 | TTTCTGGTCTTCGTCGCACA | 59.897 | 50.000 | 0.00 | 0.00 | 0.00 | 4.57 |
500 | 948 | 1.192534 | CTTTTCTGGTCTTCGTCGCAC | 59.807 | 52.381 | 0.00 | 0.00 | 0.00 | 5.34 |
501 | 949 | 1.202486 | ACTTTTCTGGTCTTCGTCGCA | 60.202 | 47.619 | 0.00 | 0.00 | 0.00 | 5.10 |
502 | 950 | 1.456165 | GACTTTTCTGGTCTTCGTCGC | 59.544 | 52.381 | 0.00 | 0.00 | 0.00 | 5.19 |
503 | 951 | 2.739292 | TGACTTTTCTGGTCTTCGTCG | 58.261 | 47.619 | 0.00 | 0.00 | 35.04 | 5.12 |
505 | 953 | 3.626217 | GGTTTGACTTTTCTGGTCTTCGT | 59.374 | 43.478 | 0.00 | 0.00 | 35.04 | 3.85 |
506 | 954 | 3.303132 | CGGTTTGACTTTTCTGGTCTTCG | 60.303 | 47.826 | 0.00 | 0.00 | 35.04 | 3.79 |
507 | 955 | 3.626217 | ACGGTTTGACTTTTCTGGTCTTC | 59.374 | 43.478 | 0.00 | 0.00 | 35.04 | 2.87 |
508 | 956 | 3.377172 | CACGGTTTGACTTTTCTGGTCTT | 59.623 | 43.478 | 0.00 | 0.00 | 35.04 | 3.01 |
510 | 958 | 2.540973 | GCACGGTTTGACTTTTCTGGTC | 60.541 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
512 | 960 | 1.269051 | GGCACGGTTTGACTTTTCTGG | 60.269 | 52.381 | 0.00 | 0.00 | 0.00 | 3.86 |
513 | 961 | 1.676006 | AGGCACGGTTTGACTTTTCTG | 59.324 | 47.619 | 0.00 | 0.00 | 43.43 | 3.02 |
520 | 968 | 5.099575 | CCAAAATATAAGGCACGGTTTGAC | 58.900 | 41.667 | 0.00 | 0.00 | 0.00 | 3.18 |
521 | 969 | 4.158764 | CCCAAAATATAAGGCACGGTTTGA | 59.841 | 41.667 | 0.00 | 0.00 | 0.00 | 2.69 |
522 | 970 | 4.158764 | TCCCAAAATATAAGGCACGGTTTG | 59.841 | 41.667 | 0.00 | 0.00 | 0.00 | 2.93 |
523 | 971 | 4.345854 | TCCCAAAATATAAGGCACGGTTT | 58.654 | 39.130 | 0.00 | 0.00 | 0.00 | 3.27 |
524 | 972 | 3.970842 | TCCCAAAATATAAGGCACGGTT | 58.029 | 40.909 | 0.00 | 0.00 | 0.00 | 4.44 |
525 | 973 | 3.655615 | TCCCAAAATATAAGGCACGGT | 57.344 | 42.857 | 0.00 | 0.00 | 0.00 | 4.83 |
526 | 974 | 3.317993 | CCTTCCCAAAATATAAGGCACGG | 59.682 | 47.826 | 0.00 | 0.00 | 32.66 | 4.94 |
527 | 975 | 4.204012 | TCCTTCCCAAAATATAAGGCACG | 58.796 | 43.478 | 0.00 | 0.00 | 38.70 | 5.34 |
529 | 977 | 4.387437 | CCCTCCTTCCCAAAATATAAGGCA | 60.387 | 45.833 | 0.00 | 0.00 | 38.70 | 4.75 |
532 | 980 | 6.267492 | ACTCCCTCCTTCCCAAAATATAAG | 57.733 | 41.667 | 0.00 | 0.00 | 0.00 | 1.73 |
533 | 981 | 7.964730 | ATACTCCCTCCTTCCCAAAATATAA | 57.035 | 36.000 | 0.00 | 0.00 | 0.00 | 0.98 |
535 | 983 | 9.285359 | CTATATACTCCCTCCTTCCCAAAATAT | 57.715 | 37.037 | 0.00 | 0.00 | 0.00 | 1.28 |
537 | 985 | 7.089566 | ACTATATACTCCCTCCTTCCCAAAAT | 58.910 | 38.462 | 0.00 | 0.00 | 0.00 | 1.82 |
538 | 986 | 6.458784 | ACTATATACTCCCTCCTTCCCAAAA | 58.541 | 40.000 | 0.00 | 0.00 | 0.00 | 2.44 |
539 | 987 | 6.051946 | ACTATATACTCCCTCCTTCCCAAA | 57.948 | 41.667 | 0.00 | 0.00 | 0.00 | 3.28 |
540 | 988 | 5.698369 | ACTATATACTCCCTCCTTCCCAA | 57.302 | 43.478 | 0.00 | 0.00 | 0.00 | 4.12 |
668 | 1297 | 2.877975 | CTCATTTGTGGGGGAGCAG | 58.122 | 57.895 | 0.00 | 0.00 | 0.00 | 4.24 |
736 | 1366 | 4.196971 | GCATACACGGGAATAAAAGGACT | 58.803 | 43.478 | 0.00 | 0.00 | 0.00 | 3.85 |
803 | 1433 | 8.456471 | GTTTAGCCCGTTAGTATCTTGAATTTT | 58.544 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
813 | 1443 | 5.764192 | TGTTGTTTGTTTAGCCCGTTAGTAT | 59.236 | 36.000 | 0.00 | 0.00 | 0.00 | 2.12 |
874 | 1521 | 2.499685 | GCGATGGGCTACCGACTT | 59.500 | 61.111 | 0.00 | 0.00 | 40.75 | 3.01 |
875 | 1522 | 3.900892 | CGCGATGGGCTACCGACT | 61.901 | 66.667 | 0.00 | 0.00 | 40.75 | 4.18 |
876 | 1523 | 4.944372 | CCGCGATGGGCTACCGAC | 62.944 | 72.222 | 8.23 | 0.00 | 40.75 | 4.79 |
930 | 1578 | 0.959553 | TTCTCGTCTCGTTTGCCTCT | 59.040 | 50.000 | 0.00 | 0.00 | 0.00 | 3.69 |
1107 | 1755 | 2.583441 | CCAGTTGTGGCCCTCGAGA | 61.583 | 63.158 | 15.71 | 0.00 | 36.89 | 4.04 |
1265 | 1913 | 2.721167 | CCCTCATCCTTGTCGCCGA | 61.721 | 63.158 | 0.00 | 0.00 | 0.00 | 5.54 |
1283 | 1931 | 2.099831 | CCACGTAGTCCTCGTCGC | 59.900 | 66.667 | 0.00 | 0.00 | 41.61 | 5.19 |
1510 | 2158 | 2.202146 | CCACTCGTCGTCGTCGTC | 60.202 | 66.667 | 11.41 | 0.00 | 38.33 | 4.20 |
1511 | 2159 | 3.720193 | CCCACTCGTCGTCGTCGT | 61.720 | 66.667 | 11.41 | 0.00 | 38.33 | 4.34 |
1807 | 2456 | 1.806623 | GCAGAACCGAACGCTATCCAT | 60.807 | 52.381 | 0.00 | 0.00 | 0.00 | 3.41 |
1944 | 2593 | 5.045797 | GGAGTACCAAGGAACAGATAAGGTT | 60.046 | 44.000 | 0.00 | 0.00 | 35.97 | 3.50 |
1959 | 2608 | 1.679977 | CGGACCGAGGGAGTACCAA | 60.680 | 63.158 | 8.64 | 0.00 | 43.89 | 3.67 |
1960 | 2609 | 2.044650 | CGGACCGAGGGAGTACCA | 60.045 | 66.667 | 8.64 | 0.00 | 43.89 | 3.25 |
1961 | 2610 | 0.967380 | TTTCGGACCGAGGGAGTACC | 60.967 | 60.000 | 17.51 | 0.00 | 37.14 | 3.34 |
1962 | 2611 | 0.890683 | TTTTCGGACCGAGGGAGTAC | 59.109 | 55.000 | 17.51 | 0.00 | 37.14 | 2.73 |
1963 | 2612 | 1.856629 | ATTTTCGGACCGAGGGAGTA | 58.143 | 50.000 | 17.51 | 0.00 | 37.14 | 2.59 |
1964 | 2613 | 1.479730 | GTATTTTCGGACCGAGGGAGT | 59.520 | 52.381 | 17.51 | 6.92 | 37.14 | 3.85 |
1965 | 2614 | 1.755380 | AGTATTTTCGGACCGAGGGAG | 59.245 | 52.381 | 17.51 | 0.00 | 37.14 | 4.30 |
1966 | 2615 | 1.856629 | AGTATTTTCGGACCGAGGGA | 58.143 | 50.000 | 17.51 | 7.50 | 37.14 | 4.20 |
1967 | 2616 | 2.277084 | CAAGTATTTTCGGACCGAGGG | 58.723 | 52.381 | 17.51 | 0.00 | 37.14 | 4.30 |
1968 | 2617 | 2.928116 | GACAAGTATTTTCGGACCGAGG | 59.072 | 50.000 | 17.51 | 3.47 | 37.14 | 4.63 |
1969 | 2618 | 3.581755 | TGACAAGTATTTTCGGACCGAG | 58.418 | 45.455 | 17.51 | 5.32 | 37.14 | 4.63 |
1970 | 2619 | 3.663995 | TGACAAGTATTTTCGGACCGA | 57.336 | 42.857 | 13.88 | 13.88 | 0.00 | 4.69 |
1971 | 2620 | 3.930229 | TGATGACAAGTATTTTCGGACCG | 59.070 | 43.478 | 7.84 | 7.84 | 0.00 | 4.79 |
1972 | 2621 | 5.873179 | TTGATGACAAGTATTTTCGGACC | 57.127 | 39.130 | 0.00 | 0.00 | 0.00 | 4.46 |
1973 | 2622 | 8.020819 | TCATTTTGATGACAAGTATTTTCGGAC | 58.979 | 33.333 | 0.00 | 0.00 | 37.32 | 4.79 |
1974 | 2623 | 8.105097 | TCATTTTGATGACAAGTATTTTCGGA | 57.895 | 30.769 | 0.00 | 0.00 | 37.32 | 4.55 |
1975 | 2624 | 8.741101 | TTCATTTTGATGACAAGTATTTTCGG | 57.259 | 30.769 | 0.00 | 0.00 | 37.32 | 4.30 |
1982 | 2631 | 9.695526 | CCTTTTGATTCATTTTGATGACAAGTA | 57.304 | 29.630 | 0.00 | 0.00 | 37.32 | 2.24 |
1983 | 2632 | 7.658575 | CCCTTTTGATTCATTTTGATGACAAGT | 59.341 | 33.333 | 0.00 | 0.00 | 37.32 | 3.16 |
1984 | 2633 | 7.874016 | TCCCTTTTGATTCATTTTGATGACAAG | 59.126 | 33.333 | 0.00 | 0.00 | 37.32 | 3.16 |
1985 | 2634 | 7.733969 | TCCCTTTTGATTCATTTTGATGACAA | 58.266 | 30.769 | 0.00 | 0.00 | 0.00 | 3.18 |
1986 | 2635 | 7.300556 | TCCCTTTTGATTCATTTTGATGACA | 57.699 | 32.000 | 0.00 | 0.00 | 0.00 | 3.58 |
1987 | 2636 | 7.820872 | ACATCCCTTTTGATTCATTTTGATGAC | 59.179 | 33.333 | 14.99 | 0.00 | 32.39 | 3.06 |
1988 | 2637 | 7.909518 | ACATCCCTTTTGATTCATTTTGATGA | 58.090 | 30.769 | 14.99 | 0.00 | 32.39 | 2.92 |
1989 | 2638 | 9.826574 | ATACATCCCTTTTGATTCATTTTGATG | 57.173 | 29.630 | 0.00 | 0.00 | 33.80 | 3.07 |
1991 | 2640 | 9.258629 | AGATACATCCCTTTTGATTCATTTTGA | 57.741 | 29.630 | 0.00 | 0.00 | 0.00 | 2.69 |
1996 | 2645 | 9.736414 | CATCTAGATACATCCCTTTTGATTCAT | 57.264 | 33.333 | 4.54 | 0.00 | 0.00 | 2.57 |
1997 | 2646 | 7.663081 | GCATCTAGATACATCCCTTTTGATTCA | 59.337 | 37.037 | 4.54 | 0.00 | 0.00 | 2.57 |
1998 | 2647 | 7.663081 | TGCATCTAGATACATCCCTTTTGATTC | 59.337 | 37.037 | 4.54 | 0.00 | 0.00 | 2.52 |
1999 | 2648 | 7.520798 | TGCATCTAGATACATCCCTTTTGATT | 58.479 | 34.615 | 4.54 | 0.00 | 0.00 | 2.57 |
2000 | 2649 | 7.083062 | TGCATCTAGATACATCCCTTTTGAT | 57.917 | 36.000 | 4.54 | 0.00 | 0.00 | 2.57 |
2001 | 2650 | 6.499106 | TGCATCTAGATACATCCCTTTTGA | 57.501 | 37.500 | 4.54 | 0.00 | 0.00 | 2.69 |
2002 | 2651 | 7.756395 | AATGCATCTAGATACATCCCTTTTG | 57.244 | 36.000 | 17.09 | 0.00 | 0.00 | 2.44 |
2003 | 2652 | 8.773033 | AAAATGCATCTAGATACATCCCTTTT | 57.227 | 30.769 | 17.09 | 12.18 | 0.00 | 2.27 |
2004 | 2653 | 9.512588 | CTAAAATGCATCTAGATACATCCCTTT | 57.487 | 33.333 | 17.09 | 15.48 | 0.00 | 3.11 |
2005 | 2654 | 8.664079 | ACTAAAATGCATCTAGATACATCCCTT | 58.336 | 33.333 | 17.09 | 13.17 | 0.00 | 3.95 |
2006 | 2655 | 8.212259 | ACTAAAATGCATCTAGATACATCCCT | 57.788 | 34.615 | 17.09 | 8.59 | 0.00 | 4.20 |
2007 | 2656 | 8.854614 | AACTAAAATGCATCTAGATACATCCC | 57.145 | 34.615 | 17.09 | 0.00 | 0.00 | 3.85 |
2008 | 2657 | 9.717942 | AGAACTAAAATGCATCTAGATACATCC | 57.282 | 33.333 | 17.09 | 3.81 | 0.00 | 3.51 |
2016 | 2665 | 8.599055 | TGCATCTAGAACTAAAATGCATCTAG | 57.401 | 34.615 | 18.78 | 5.78 | 45.55 | 2.43 |
2022 | 2671 | 6.874288 | AGGATGCATCTAGAACTAAAATGC | 57.126 | 37.500 | 25.28 | 15.67 | 42.32 | 3.56 |
2046 | 2695 | 9.829507 | AATACTTGTCATCAAAATGGACAAAAA | 57.170 | 25.926 | 7.70 | 0.55 | 34.98 | 1.94 |
2047 | 2696 | 9.829507 | AAATACTTGTCATCAAAATGGACAAAA | 57.170 | 25.926 | 7.70 | 0.84 | 34.98 | 2.44 |
2048 | 2697 | 9.829507 | AAAATACTTGTCATCAAAATGGACAAA | 57.170 | 25.926 | 7.70 | 0.00 | 34.98 | 2.83 |
2049 | 2698 | 9.829507 | AAAAATACTTGTCATCAAAATGGACAA | 57.170 | 25.926 | 0.00 | 0.00 | 34.59 | 3.18 |
2050 | 2699 | 9.258826 | CAAAAATACTTGTCATCAAAATGGACA | 57.741 | 29.630 | 0.00 | 0.00 | 33.42 | 4.02 |
2051 | 2700 | 8.711457 | CCAAAAATACTTGTCATCAAAATGGAC | 58.289 | 33.333 | 0.00 | 0.00 | 33.42 | 4.02 |
2052 | 2701 | 8.646004 | TCCAAAAATACTTGTCATCAAAATGGA | 58.354 | 29.630 | 0.00 | 0.00 | 33.42 | 3.41 |
2053 | 2702 | 8.711457 | GTCCAAAAATACTTGTCATCAAAATGG | 58.289 | 33.333 | 0.00 | 0.00 | 33.42 | 3.16 |
2054 | 2703 | 8.427012 | CGTCCAAAAATACTTGTCATCAAAATG | 58.573 | 33.333 | 0.00 | 0.00 | 32.87 | 2.32 |
2055 | 2704 | 7.598493 | CCGTCCAAAAATACTTGTCATCAAAAT | 59.402 | 33.333 | 0.00 | 0.00 | 32.87 | 1.82 |
2056 | 2705 | 6.920758 | CCGTCCAAAAATACTTGTCATCAAAA | 59.079 | 34.615 | 0.00 | 0.00 | 32.87 | 2.44 |
2057 | 2706 | 6.263392 | TCCGTCCAAAAATACTTGTCATCAAA | 59.737 | 34.615 | 0.00 | 0.00 | 32.87 | 2.69 |
2058 | 2707 | 5.765677 | TCCGTCCAAAAATACTTGTCATCAA | 59.234 | 36.000 | 0.00 | 0.00 | 0.00 | 2.57 |
2059 | 2708 | 5.309638 | TCCGTCCAAAAATACTTGTCATCA | 58.690 | 37.500 | 0.00 | 0.00 | 0.00 | 3.07 |
2060 | 2709 | 5.163754 | CCTCCGTCCAAAAATACTTGTCATC | 60.164 | 44.000 | 0.00 | 0.00 | 0.00 | 2.92 |
2061 | 2710 | 4.700213 | CCTCCGTCCAAAAATACTTGTCAT | 59.300 | 41.667 | 0.00 | 0.00 | 0.00 | 3.06 |
2062 | 2711 | 4.069304 | CCTCCGTCCAAAAATACTTGTCA | 58.931 | 43.478 | 0.00 | 0.00 | 0.00 | 3.58 |
2063 | 2712 | 3.439129 | CCCTCCGTCCAAAAATACTTGTC | 59.561 | 47.826 | 0.00 | 0.00 | 0.00 | 3.18 |
2064 | 2713 | 3.073356 | TCCCTCCGTCCAAAAATACTTGT | 59.927 | 43.478 | 0.00 | 0.00 | 0.00 | 3.16 |
2065 | 2714 | 3.681593 | TCCCTCCGTCCAAAAATACTTG | 58.318 | 45.455 | 0.00 | 0.00 | 0.00 | 3.16 |
2066 | 2715 | 3.329814 | ACTCCCTCCGTCCAAAAATACTT | 59.670 | 43.478 | 0.00 | 0.00 | 0.00 | 2.24 |
2067 | 2716 | 2.910977 | ACTCCCTCCGTCCAAAAATACT | 59.089 | 45.455 | 0.00 | 0.00 | 0.00 | 2.12 |
2068 | 2717 | 3.345508 | ACTCCCTCCGTCCAAAAATAC | 57.654 | 47.619 | 0.00 | 0.00 | 0.00 | 1.89 |
2069 | 2718 | 5.703730 | AATACTCCCTCCGTCCAAAAATA | 57.296 | 39.130 | 0.00 | 0.00 | 0.00 | 1.40 |
2070 | 2719 | 4.586306 | AATACTCCCTCCGTCCAAAAAT | 57.414 | 40.909 | 0.00 | 0.00 | 0.00 | 1.82 |
2071 | 2720 | 4.533311 | ACTAATACTCCCTCCGTCCAAAAA | 59.467 | 41.667 | 0.00 | 0.00 | 0.00 | 1.94 |
2072 | 2721 | 4.098894 | ACTAATACTCCCTCCGTCCAAAA | 58.901 | 43.478 | 0.00 | 0.00 | 0.00 | 2.44 |
2073 | 2722 | 3.716431 | ACTAATACTCCCTCCGTCCAAA | 58.284 | 45.455 | 0.00 | 0.00 | 0.00 | 3.28 |
2074 | 2723 | 3.393426 | ACTAATACTCCCTCCGTCCAA | 57.607 | 47.619 | 0.00 | 0.00 | 0.00 | 3.53 |
2075 | 2724 | 3.749954 | GCTACTAATACTCCCTCCGTCCA | 60.750 | 52.174 | 0.00 | 0.00 | 0.00 | 4.02 |
2076 | 2725 | 2.819019 | GCTACTAATACTCCCTCCGTCC | 59.181 | 54.545 | 0.00 | 0.00 | 0.00 | 4.79 |
2077 | 2726 | 2.819019 | GGCTACTAATACTCCCTCCGTC | 59.181 | 54.545 | 0.00 | 0.00 | 0.00 | 4.79 |
2078 | 2727 | 2.176364 | TGGCTACTAATACTCCCTCCGT | 59.824 | 50.000 | 0.00 | 0.00 | 0.00 | 4.69 |
2079 | 2728 | 2.557490 | GTGGCTACTAATACTCCCTCCG | 59.443 | 54.545 | 0.00 | 0.00 | 0.00 | 4.63 |
2080 | 2729 | 3.573695 | TGTGGCTACTAATACTCCCTCC | 58.426 | 50.000 | 0.64 | 0.00 | 0.00 | 4.30 |
2081 | 2730 | 5.609533 | TTTGTGGCTACTAATACTCCCTC | 57.390 | 43.478 | 0.64 | 0.00 | 0.00 | 4.30 |
2082 | 2731 | 6.357367 | CAATTTGTGGCTACTAATACTCCCT | 58.643 | 40.000 | 10.02 | 0.00 | 32.36 | 4.20 |
2083 | 2732 | 5.008712 | GCAATTTGTGGCTACTAATACTCCC | 59.991 | 44.000 | 10.02 | 0.00 | 32.36 | 4.30 |
2084 | 2733 | 5.823045 | AGCAATTTGTGGCTACTAATACTCC | 59.177 | 40.000 | 10.02 | 0.91 | 38.90 | 3.85 |
2085 | 2734 | 6.538742 | TCAGCAATTTGTGGCTACTAATACTC | 59.461 | 38.462 | 10.02 | 3.64 | 38.56 | 2.59 |
2086 | 2735 | 6.414732 | TCAGCAATTTGTGGCTACTAATACT | 58.585 | 36.000 | 10.02 | 8.24 | 38.56 | 2.12 |
2087 | 2736 | 6.677781 | TCAGCAATTTGTGGCTACTAATAC | 57.322 | 37.500 | 10.02 | 6.33 | 38.56 | 1.89 |
2088 | 2737 | 7.282585 | AGATCAGCAATTTGTGGCTACTAATA | 58.717 | 34.615 | 10.02 | 0.00 | 38.56 | 0.98 |
2089 | 2738 | 6.125029 | AGATCAGCAATTTGTGGCTACTAAT | 58.875 | 36.000 | 4.14 | 4.14 | 38.56 | 1.73 |
2288 | 2937 | 9.914834 | AGGATTTAAACTTATTGGTATGCTGTA | 57.085 | 29.630 | 0.00 | 0.00 | 0.00 | 2.74 |
2316 | 2965 | 2.371510 | TGATCCACACACAATCCTCACA | 59.628 | 45.455 | 0.00 | 0.00 | 0.00 | 3.58 |
2319 | 2968 | 5.649782 | AAATTGATCCACACACAATCCTC | 57.350 | 39.130 | 0.00 | 0.00 | 33.90 | 3.71 |
2417 | 3066 | 5.401531 | TTTAAGGACTACAGCTGTACCAG | 57.598 | 43.478 | 26.78 | 20.52 | 34.12 | 4.00 |
2527 | 3188 | 4.931914 | TCAGTACTGGAAAGTAGCCTAGT | 58.068 | 43.478 | 22.48 | 0.00 | 0.00 | 2.57 |
2624 | 3285 | 7.148474 | GCAATCGTTTCTAACTCTCCATGTTAA | 60.148 | 37.037 | 0.00 | 0.00 | 30.72 | 2.01 |
2720 | 3405 | 4.497473 | ACTAGAGCTCACGCATATTCTC | 57.503 | 45.455 | 17.77 | 0.00 | 39.10 | 2.87 |
2721 | 3406 | 6.582677 | ATTACTAGAGCTCACGCATATTCT | 57.417 | 37.500 | 17.77 | 0.00 | 39.10 | 2.40 |
2722 | 3407 | 6.090088 | CCAATTACTAGAGCTCACGCATATTC | 59.910 | 42.308 | 17.77 | 0.00 | 39.10 | 1.75 |
2723 | 3408 | 5.928839 | CCAATTACTAGAGCTCACGCATATT | 59.071 | 40.000 | 17.77 | 5.43 | 39.10 | 1.28 |
2724 | 3409 | 5.011125 | ACCAATTACTAGAGCTCACGCATAT | 59.989 | 40.000 | 17.77 | 0.00 | 39.10 | 1.78 |
2725 | 3410 | 4.341235 | ACCAATTACTAGAGCTCACGCATA | 59.659 | 41.667 | 17.77 | 0.00 | 39.10 | 3.14 |
2726 | 3411 | 3.133003 | ACCAATTACTAGAGCTCACGCAT | 59.867 | 43.478 | 17.77 | 0.00 | 39.10 | 4.73 |
2727 | 3412 | 2.496070 | ACCAATTACTAGAGCTCACGCA | 59.504 | 45.455 | 17.77 | 0.00 | 39.10 | 5.24 |
2728 | 3413 | 3.166489 | ACCAATTACTAGAGCTCACGC | 57.834 | 47.619 | 17.77 | 0.00 | 0.00 | 5.34 |
2729 | 3414 | 6.331061 | AGTTTACCAATTACTAGAGCTCACG | 58.669 | 40.000 | 17.77 | 8.64 | 0.00 | 4.35 |
2790 | 3475 | 5.762218 | CCCAAATTTAGTTGAACATGCCAAA | 59.238 | 36.000 | 0.00 | 0.00 | 0.00 | 3.28 |
2807 | 3492 | 6.950860 | AACCCATCAGAAATAACCCAAATT | 57.049 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
2908 | 3593 | 2.614057 | CGAATAAGTCCAAGCCCATGTC | 59.386 | 50.000 | 0.00 | 0.00 | 0.00 | 3.06 |
3032 | 3717 | 7.763356 | TGTGAAATCGAAGGTGTTTTTCTAAA | 58.237 | 30.769 | 6.88 | 0.00 | 0.00 | 1.85 |
3227 | 4185 | 1.567357 | TTTTTAAGGGCCCTGGATGC | 58.433 | 50.000 | 29.50 | 0.00 | 0.00 | 3.91 |
3236 | 4194 | 4.401519 | GGTGGTTCCTAGATTTTTAAGGGC | 59.598 | 45.833 | 0.00 | 0.00 | 0.00 | 5.19 |
3395 | 4363 | 5.382664 | AACTTCCTGGTAAGTTCAAGGAA | 57.617 | 39.130 | 14.51 | 11.39 | 44.43 | 3.36 |
3495 | 4467 | 6.268387 | TCACTGCACATCATCTATGGATCTAA | 59.732 | 38.462 | 0.00 | 0.00 | 40.16 | 2.10 |
3596 | 4576 | 5.453339 | GGATCGATCTCTAACAACCATTCCA | 60.453 | 44.000 | 23.96 | 0.00 | 0.00 | 3.53 |
3765 | 4745 | 2.822637 | CCTCTGGTGGCTGTGGTGT | 61.823 | 63.158 | 0.00 | 0.00 | 0.00 | 4.16 |
3812 | 4792 | 2.230508 | GTCGTCTACTGTGAACCCATCA | 59.769 | 50.000 | 0.00 | 0.00 | 35.05 | 3.07 |
3886 | 4866 | 4.036027 | CAGTTGCACACATCAGAGTTCTTT | 59.964 | 41.667 | 0.00 | 0.00 | 0.00 | 2.52 |
4247 | 5231 | 9.188588 | CACTTGTGATATAATCCATGAATTTGC | 57.811 | 33.333 | 0.00 | 0.00 | 0.00 | 3.68 |
4572 | 5913 | 4.939271 | TCTATCATCGCACGGTAATCAAA | 58.061 | 39.130 | 0.00 | 0.00 | 0.00 | 2.69 |
4624 | 5966 | 9.261180 | CACAAAAGAGTGTACTTCTATCTTTCA | 57.739 | 33.333 | 0.00 | 0.00 | 38.82 | 2.69 |
4726 | 6083 | 5.185635 | CCATTGCAGAAATAAGAGGAACCAA | 59.814 | 40.000 | 0.00 | 0.00 | 0.00 | 3.67 |
4727 | 6084 | 4.706476 | CCATTGCAGAAATAAGAGGAACCA | 59.294 | 41.667 | 0.00 | 0.00 | 0.00 | 3.67 |
4768 | 6125 | 3.618997 | CGACTAACACAACCCTGGCTTAT | 60.619 | 47.826 | 0.00 | 0.00 | 0.00 | 1.73 |
4769 | 6126 | 2.289195 | CGACTAACACAACCCTGGCTTA | 60.289 | 50.000 | 0.00 | 0.00 | 0.00 | 3.09 |
4770 | 6127 | 1.542547 | CGACTAACACAACCCTGGCTT | 60.543 | 52.381 | 0.00 | 0.00 | 0.00 | 4.35 |
4771 | 6128 | 0.034896 | CGACTAACACAACCCTGGCT | 59.965 | 55.000 | 0.00 | 0.00 | 0.00 | 4.75 |
4772 | 6129 | 0.250166 | ACGACTAACACAACCCTGGC | 60.250 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
4776 | 6397 | 2.071540 | GCCTAACGACTAACACAACCC | 58.928 | 52.381 | 0.00 | 0.00 | 0.00 | 4.11 |
4779 | 6400 | 6.380095 | AAAATTGCCTAACGACTAACACAA | 57.620 | 33.333 | 0.00 | 0.00 | 0.00 | 3.33 |
4806 | 6428 | 6.546034 | ACAGGAAATATGTGTAACTAATGGCC | 59.454 | 38.462 | 0.00 | 0.00 | 38.04 | 5.36 |
4827 | 6449 | 5.390567 | GCTACGAAACAAGTTATTGGACAGG | 60.391 | 44.000 | 0.00 | 0.00 | 40.97 | 4.00 |
5059 | 6682 | 5.047847 | GCGGACTACATACAGAGCAAAATA | 58.952 | 41.667 | 0.00 | 0.00 | 0.00 | 1.40 |
5120 | 6743 | 5.055144 | GGAGTTCGGACAAAATATACTCCC | 58.945 | 45.833 | 9.18 | 0.00 | 42.65 | 4.30 |
5135 | 6758 | 1.676006 | AGCAACAACAAAGGAGTTCGG | 59.324 | 47.619 | 0.00 | 0.00 | 0.00 | 4.30 |
5160 | 6800 | 3.350833 | AGACCAACAGATTCAATCAGGC | 58.649 | 45.455 | 0.00 | 0.00 | 0.00 | 4.85 |
5197 | 6837 | 5.294306 | CACACTTCATAACATAGCCGAACAT | 59.706 | 40.000 | 0.00 | 0.00 | 0.00 | 2.71 |
5209 | 6853 | 4.023279 | TGCATGTTCCACACACTTCATAAC | 60.023 | 41.667 | 0.00 | 0.00 | 38.61 | 1.89 |
5214 | 6858 | 3.648339 | AATGCATGTTCCACACACTTC | 57.352 | 42.857 | 0.00 | 0.00 | 38.61 | 3.01 |
5325 | 6969 | 4.033009 | TCATGATGCTCTAGGGAAACAGA | 58.967 | 43.478 | 0.00 | 0.00 | 0.00 | 3.41 |
5333 | 6977 | 4.933505 | TCAGACTTCATGATGCTCTAGG | 57.066 | 45.455 | 8.45 | 2.02 | 0.00 | 3.02 |
5595 | 7242 | 0.103937 | AGCAGCCGCAAGAGAGATAC | 59.896 | 55.000 | 0.00 | 0.00 | 42.27 | 2.24 |
5600 | 7247 | 3.541950 | AAGCAGCAGCCGCAAGAGA | 62.542 | 57.895 | 2.79 | 0.00 | 43.56 | 3.10 |
5604 | 7251 | 1.742880 | CTAGAAGCAGCAGCCGCAA | 60.743 | 57.895 | 2.79 | 0.00 | 43.56 | 4.85 |
5635 | 7282 | 1.479323 | GTGATAGTCTTGGGTGCGGTA | 59.521 | 52.381 | 0.00 | 0.00 | 0.00 | 4.02 |
5640 | 7287 | 2.567169 | TCCACTGTGATAGTCTTGGGTG | 59.433 | 50.000 | 9.86 | 0.00 | 37.60 | 4.61 |
5641 | 7288 | 2.567615 | GTCCACTGTGATAGTCTTGGGT | 59.432 | 50.000 | 9.86 | 0.00 | 37.60 | 4.51 |
5761 | 7410 | 3.146066 | TGGCCTTGTTGTGTAGATGAAC | 58.854 | 45.455 | 3.32 | 0.00 | 0.00 | 3.18 |
5768 | 7417 | 1.429930 | TCTCCTGGCCTTGTTGTGTA | 58.570 | 50.000 | 3.32 | 0.00 | 0.00 | 2.90 |
5893 | 7548 | 1.378778 | AGCCCGTCGAGCTTAGACT | 60.379 | 57.895 | 17.40 | 0.89 | 37.24 | 3.24 |
5894 | 7549 | 1.226717 | CAGCCCGTCGAGCTTAGAC | 60.227 | 63.158 | 0.00 | 11.80 | 38.95 | 2.59 |
5900 | 7555 | 2.098831 | GGTTAACAGCCCGTCGAGC | 61.099 | 63.158 | 8.10 | 0.00 | 0.00 | 5.03 |
5915 | 7570 | 2.028043 | GTTCGACGACGTGGGGTT | 59.972 | 61.111 | 4.58 | 0.00 | 40.69 | 4.11 |
5926 | 7581 | 1.338674 | TGGATGGATGGTGTGTTCGAC | 60.339 | 52.381 | 0.00 | 0.00 | 0.00 | 4.20 |
5936 | 7591 | 1.376466 | GGGACGGATGGATGGATGG | 59.624 | 63.158 | 0.00 | 0.00 | 0.00 | 3.51 |
5937 | 7592 | 0.473755 | TTGGGACGGATGGATGGATG | 59.526 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
5938 | 7593 | 0.767375 | CTTGGGACGGATGGATGGAT | 59.233 | 55.000 | 0.00 | 0.00 | 0.00 | 3.41 |
5939 | 7594 | 1.983119 | GCTTGGGACGGATGGATGGA | 61.983 | 60.000 | 0.00 | 0.00 | 0.00 | 3.41 |
5957 | 7612 | 1.734117 | GGCAAGGAAATGTGCACGC | 60.734 | 57.895 | 13.13 | 6.45 | 42.74 | 5.34 |
6050 | 7706 | 8.402472 | CGCTGATTTTTACAATCTTAATACCCA | 58.598 | 33.333 | 0.00 | 0.00 | 0.00 | 4.51 |
6117 | 7780 | 6.094048 | CACAAGTGCAAGCCAAGTATACTTAT | 59.906 | 38.462 | 17.62 | 4.76 | 34.28 | 1.73 |
6193 | 7856 | 1.609841 | CCAAAGGGACCGTTAGACACC | 60.610 | 57.143 | 0.00 | 0.00 | 35.59 | 4.16 |
6220 | 7883 | 0.546747 | CTACCCTTCCCTGTCCCACA | 60.547 | 60.000 | 0.00 | 0.00 | 0.00 | 4.17 |
6366 | 8030 | 5.550403 | TCTTGTAATAACTCCTGAAACCCCT | 59.450 | 40.000 | 0.00 | 0.00 | 0.00 | 4.79 |
6367 | 8031 | 5.812286 | TCTTGTAATAACTCCTGAAACCCC | 58.188 | 41.667 | 0.00 | 0.00 | 0.00 | 4.95 |
6376 | 8041 | 6.679638 | GCCGGGAATTTTCTTGTAATAACTCC | 60.680 | 42.308 | 2.18 | 0.00 | 0.00 | 3.85 |
6394 | 8059 | 2.747686 | GTGTTCAGAGGCCGGGAA | 59.252 | 61.111 | 2.18 | 0.00 | 0.00 | 3.97 |
6454 | 8120 | 1.678101 | ACTTGCACAGAAAAGTGAGGC | 59.322 | 47.619 | 0.00 | 0.00 | 42.05 | 4.70 |
6534 | 8200 | 2.393271 | ATTTGCCTCCGACTTCTCAG | 57.607 | 50.000 | 0.00 | 0.00 | 0.00 | 3.35 |
6588 | 8254 | 3.196685 | CAGGTGGTCCCTTTTGACAAAAA | 59.803 | 43.478 | 14.04 | 0.00 | 42.73 | 1.94 |
6589 | 8255 | 2.763448 | CAGGTGGTCCCTTTTGACAAAA | 59.237 | 45.455 | 12.62 | 12.62 | 42.73 | 2.44 |
6590 | 8256 | 2.291930 | ACAGGTGGTCCCTTTTGACAAA | 60.292 | 45.455 | 0.00 | 0.00 | 42.73 | 2.83 |
6591 | 8257 | 1.286553 | ACAGGTGGTCCCTTTTGACAA | 59.713 | 47.619 | 0.00 | 0.00 | 42.73 | 3.18 |
6592 | 8258 | 0.923358 | ACAGGTGGTCCCTTTTGACA | 59.077 | 50.000 | 0.00 | 0.00 | 42.73 | 3.58 |
6593 | 8259 | 1.605753 | GACAGGTGGTCCCTTTTGAC | 58.394 | 55.000 | 0.00 | 0.00 | 42.73 | 3.18 |
6602 | 8268 | 0.611714 | ATACCGTTGGACAGGTGGTC | 59.388 | 55.000 | 0.00 | 0.00 | 46.20 | 4.02 |
6603 | 8269 | 1.061546 | AATACCGTTGGACAGGTGGT | 58.938 | 50.000 | 0.00 | 0.00 | 41.51 | 4.16 |
6604 | 8270 | 1.002659 | TCAATACCGTTGGACAGGTGG | 59.997 | 52.381 | 0.00 | 0.00 | 41.51 | 4.61 |
6605 | 8271 | 2.073816 | GTCAATACCGTTGGACAGGTG | 58.926 | 52.381 | 0.00 | 0.00 | 41.51 | 4.00 |
6606 | 8272 | 1.695242 | TGTCAATACCGTTGGACAGGT | 59.305 | 47.619 | 0.00 | 0.00 | 44.08 | 4.00 |
6607 | 8273 | 2.465860 | TGTCAATACCGTTGGACAGG | 57.534 | 50.000 | 0.00 | 0.00 | 35.51 | 4.00 |
6608 | 8274 | 4.822036 | TTTTGTCAATACCGTTGGACAG | 57.178 | 40.909 | 0.00 | 0.00 | 40.90 | 3.51 |
6656 | 8322 | 3.492482 | CGCCATGTTTCAAGGGTCTTTTT | 60.492 | 43.478 | 0.00 | 0.00 | 0.00 | 1.94 |
6657 | 8323 | 2.035832 | CGCCATGTTTCAAGGGTCTTTT | 59.964 | 45.455 | 0.00 | 0.00 | 0.00 | 2.27 |
6658 | 8324 | 1.613437 | CGCCATGTTTCAAGGGTCTTT | 59.387 | 47.619 | 0.00 | 0.00 | 0.00 | 2.52 |
6659 | 8325 | 1.202879 | TCGCCATGTTTCAAGGGTCTT | 60.203 | 47.619 | 0.00 | 0.00 | 0.00 | 3.01 |
6660 | 8326 | 0.400213 | TCGCCATGTTTCAAGGGTCT | 59.600 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
6661 | 8327 | 0.521735 | GTCGCCATGTTTCAAGGGTC | 59.478 | 55.000 | 0.00 | 0.00 | 0.00 | 4.46 |
6662 | 8328 | 0.179004 | TGTCGCCATGTTTCAAGGGT | 60.179 | 50.000 | 0.00 | 0.00 | 0.00 | 4.34 |
6663 | 8329 | 0.523072 | CTGTCGCCATGTTTCAAGGG | 59.477 | 55.000 | 0.00 | 0.00 | 0.00 | 3.95 |
6664 | 8330 | 0.523072 | CCTGTCGCCATGTTTCAAGG | 59.477 | 55.000 | 0.00 | 0.00 | 0.00 | 3.61 |
6665 | 8331 | 0.109597 | GCCTGTCGCCATGTTTCAAG | 60.110 | 55.000 | 0.00 | 0.00 | 0.00 | 3.02 |
6666 | 8332 | 1.851021 | CGCCTGTCGCCATGTTTCAA | 61.851 | 55.000 | 0.00 | 0.00 | 0.00 | 2.69 |
6667 | 8333 | 2.324330 | CGCCTGTCGCCATGTTTCA | 61.324 | 57.895 | 0.00 | 0.00 | 0.00 | 2.69 |
6668 | 8334 | 2.480555 | CGCCTGTCGCCATGTTTC | 59.519 | 61.111 | 0.00 | 0.00 | 0.00 | 2.78 |
6724 | 8390 | 4.849310 | TAATCTGTGGCCCGCCGC | 62.849 | 66.667 | 12.41 | 12.41 | 46.15 | 6.53 |
6725 | 8391 | 2.895372 | GTAATCTGTGGCCCGCCG | 60.895 | 66.667 | 0.00 | 0.00 | 39.42 | 6.46 |
6726 | 8392 | 2.895372 | CGTAATCTGTGGCCCGCC | 60.895 | 66.667 | 0.00 | 0.00 | 0.00 | 6.13 |
6727 | 8393 | 2.895372 | CCGTAATCTGTGGCCCGC | 60.895 | 66.667 | 0.00 | 0.00 | 0.00 | 6.13 |
6728 | 8394 | 1.813753 | CACCGTAATCTGTGGCCCG | 60.814 | 63.158 | 0.00 | 0.00 | 0.00 | 6.13 |
6729 | 8395 | 2.112815 | GCACCGTAATCTGTGGCCC | 61.113 | 63.158 | 0.00 | 0.00 | 33.08 | 5.80 |
6730 | 8396 | 0.958382 | TTGCACCGTAATCTGTGGCC | 60.958 | 55.000 | 0.00 | 0.00 | 33.08 | 5.36 |
6731 | 8397 | 0.168128 | GTTGCACCGTAATCTGTGGC | 59.832 | 55.000 | 0.00 | 0.00 | 33.08 | 5.01 |
6732 | 8398 | 1.196808 | GTGTTGCACCGTAATCTGTGG | 59.803 | 52.381 | 0.00 | 0.00 | 33.08 | 4.17 |
6733 | 8399 | 2.096268 | CAGTGTTGCACCGTAATCTGTG | 60.096 | 50.000 | 0.00 | 0.00 | 34.49 | 3.66 |
6734 | 8400 | 2.143122 | CAGTGTTGCACCGTAATCTGT | 58.857 | 47.619 | 0.00 | 0.00 | 34.49 | 3.41 |
6735 | 8401 | 1.464608 | CCAGTGTTGCACCGTAATCTG | 59.535 | 52.381 | 0.00 | 0.00 | 34.49 | 2.90 |
6736 | 8402 | 1.808411 | CCAGTGTTGCACCGTAATCT | 58.192 | 50.000 | 0.00 | 0.00 | 34.49 | 2.40 |
6737 | 8403 | 0.168128 | GCCAGTGTTGCACCGTAATC | 59.832 | 55.000 | 0.00 | 0.00 | 34.49 | 1.75 |
6738 | 8404 | 1.573829 | CGCCAGTGTTGCACCGTAAT | 61.574 | 55.000 | 0.00 | 0.00 | 34.49 | 1.89 |
6739 | 8405 | 2.248135 | CGCCAGTGTTGCACCGTAA | 61.248 | 57.895 | 0.00 | 0.00 | 34.49 | 3.18 |
6740 | 8406 | 2.663520 | CGCCAGTGTTGCACCGTA | 60.664 | 61.111 | 0.00 | 0.00 | 34.49 | 4.02 |
6743 | 8409 | 3.898509 | TTGCGCCAGTGTTGCACC | 61.899 | 61.111 | 4.18 | 0.00 | 38.55 | 5.01 |
6744 | 8410 | 2.655044 | GTTGCGCCAGTGTTGCAC | 60.655 | 61.111 | 4.18 | 0.00 | 38.55 | 4.57 |
6745 | 8411 | 3.123523 | CTGTTGCGCCAGTGTTGCA | 62.124 | 57.895 | 4.18 | 2.65 | 36.72 | 4.08 |
6746 | 8412 | 2.335052 | TTCTGTTGCGCCAGTGTTGC | 62.335 | 55.000 | 4.18 | 0.00 | 34.02 | 4.17 |
6747 | 8413 | 0.592247 | GTTCTGTTGCGCCAGTGTTG | 60.592 | 55.000 | 4.18 | 0.00 | 34.02 | 3.33 |
6748 | 8414 | 1.727467 | GTTCTGTTGCGCCAGTGTT | 59.273 | 52.632 | 4.18 | 0.00 | 34.02 | 3.32 |
6749 | 8415 | 2.534019 | CGTTCTGTTGCGCCAGTGT | 61.534 | 57.895 | 4.18 | 0.00 | 34.02 | 3.55 |
6750 | 8416 | 2.249309 | CGTTCTGTTGCGCCAGTG | 59.751 | 61.111 | 4.18 | 0.00 | 34.02 | 3.66 |
6751 | 8417 | 2.972505 | CCGTTCTGTTGCGCCAGT | 60.973 | 61.111 | 4.18 | 0.00 | 34.02 | 4.00 |
6752 | 8418 | 2.972505 | ACCGTTCTGTTGCGCCAG | 60.973 | 61.111 | 4.18 | 6.07 | 0.00 | 4.85 |
6753 | 8419 | 3.276091 | CACCGTTCTGTTGCGCCA | 61.276 | 61.111 | 4.18 | 0.00 | 0.00 | 5.69 |
6754 | 8420 | 3.276846 | ACACCGTTCTGTTGCGCC | 61.277 | 61.111 | 4.18 | 0.00 | 0.00 | 6.53 |
6755 | 8421 | 2.052237 | CACACCGTTCTGTTGCGC | 60.052 | 61.111 | 0.00 | 0.00 | 0.00 | 6.09 |
6756 | 8422 | 0.588730 | CAACACACCGTTCTGTTGCG | 60.589 | 55.000 | 6.08 | 0.00 | 40.51 | 4.85 |
6757 | 8423 | 0.248458 | CCAACACACCGTTCTGTTGC | 60.248 | 55.000 | 11.25 | 0.00 | 43.97 | 4.17 |
6758 | 8424 | 0.380378 | CCCAACACACCGTTCTGTTG | 59.620 | 55.000 | 10.24 | 10.24 | 44.61 | 3.33 |
6759 | 8425 | 0.750182 | CCCCAACACACCGTTCTGTT | 60.750 | 55.000 | 0.00 | 0.00 | 34.86 | 3.16 |
6760 | 8426 | 1.153046 | CCCCAACACACCGTTCTGT | 60.153 | 57.895 | 0.00 | 0.00 | 34.86 | 3.41 |
6761 | 8427 | 1.153046 | ACCCCAACACACCGTTCTG | 60.153 | 57.895 | 0.00 | 0.00 | 34.86 | 3.02 |
6762 | 8428 | 1.153046 | CACCCCAACACACCGTTCT | 60.153 | 57.895 | 0.00 | 0.00 | 34.86 | 3.01 |
6763 | 8429 | 2.190841 | CCACCCCAACACACCGTTC | 61.191 | 63.158 | 0.00 | 0.00 | 34.86 | 3.95 |
6764 | 8430 | 2.124067 | CCACCCCAACACACCGTT | 60.124 | 61.111 | 0.00 | 0.00 | 38.83 | 4.44 |
6765 | 8431 | 4.198224 | CCCACCCCAACACACCGT | 62.198 | 66.667 | 0.00 | 0.00 | 0.00 | 4.83 |
6798 | 8464 | 3.058160 | AACACATGCCGCCAGCTC | 61.058 | 61.111 | 0.00 | 0.00 | 44.23 | 4.09 |
6799 | 8465 | 3.367743 | CAACACATGCCGCCAGCT | 61.368 | 61.111 | 0.00 | 0.00 | 44.23 | 4.24 |
6800 | 8466 | 3.673484 | ACAACACATGCCGCCAGC | 61.673 | 61.111 | 0.00 | 0.00 | 44.14 | 4.85 |
6801 | 8467 | 2.256158 | CACAACACATGCCGCCAG | 59.744 | 61.111 | 0.00 | 0.00 | 0.00 | 4.85 |
6802 | 8468 | 3.976000 | GCACAACACATGCCGCCA | 61.976 | 61.111 | 0.00 | 0.00 | 37.08 | 5.69 |
6808 | 8474 | 4.325304 | TGCGCGGCACAACACATG | 62.325 | 61.111 | 8.83 | 0.00 | 31.71 | 3.21 |
6823 | 8489 | 3.612247 | ATGAGGGGCAGTCACGTGC | 62.612 | 63.158 | 11.67 | 6.26 | 43.19 | 5.34 |
6824 | 8490 | 1.448540 | GATGAGGGGCAGTCACGTG | 60.449 | 63.158 | 9.94 | 9.94 | 0.00 | 4.49 |
6825 | 8491 | 2.982130 | GATGAGGGGCAGTCACGT | 59.018 | 61.111 | 0.00 | 0.00 | 0.00 | 4.49 |
6826 | 8492 | 2.202797 | CGATGAGGGGCAGTCACG | 60.203 | 66.667 | 0.00 | 0.00 | 0.00 | 4.35 |
6827 | 8493 | 0.321653 | AAACGATGAGGGGCAGTCAC | 60.322 | 55.000 | 0.00 | 0.00 | 0.00 | 3.67 |
6828 | 8494 | 0.400213 | AAAACGATGAGGGGCAGTCA | 59.600 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
6829 | 8495 | 1.087501 | GAAAACGATGAGGGGCAGTC | 58.912 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
6830 | 8496 | 0.693049 | AGAAAACGATGAGGGGCAGT | 59.307 | 50.000 | 0.00 | 0.00 | 0.00 | 4.40 |
6831 | 8497 | 1.089920 | CAGAAAACGATGAGGGGCAG | 58.910 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
6832 | 8498 | 0.400213 | ACAGAAAACGATGAGGGGCA | 59.600 | 50.000 | 0.00 | 0.00 | 0.00 | 5.36 |
6833 | 8499 | 1.087501 | GACAGAAAACGATGAGGGGC | 58.912 | 55.000 | 0.00 | 0.00 | 0.00 | 5.80 |
6834 | 8500 | 1.679032 | GGGACAGAAAACGATGAGGGG | 60.679 | 57.143 | 0.00 | 0.00 | 0.00 | 4.79 |
6835 | 8501 | 1.279271 | AGGGACAGAAAACGATGAGGG | 59.721 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
6836 | 8502 | 2.350522 | CAGGGACAGAAAACGATGAGG | 58.649 | 52.381 | 0.00 | 0.00 | 0.00 | 3.86 |
6837 | 8503 | 1.734465 | GCAGGGACAGAAAACGATGAG | 59.266 | 52.381 | 0.00 | 0.00 | 0.00 | 2.90 |
6838 | 8504 | 1.808411 | GCAGGGACAGAAAACGATGA | 58.192 | 50.000 | 0.00 | 0.00 | 0.00 | 2.92 |
6839 | 8505 | 0.443869 | CGCAGGGACAGAAAACGATG | 59.556 | 55.000 | 0.00 | 0.00 | 0.00 | 3.84 |
6840 | 8506 | 1.298859 | GCGCAGGGACAGAAAACGAT | 61.299 | 55.000 | 0.30 | 0.00 | 0.00 | 3.73 |
6841 | 8507 | 1.959226 | GCGCAGGGACAGAAAACGA | 60.959 | 57.895 | 0.30 | 0.00 | 0.00 | 3.85 |
6842 | 8508 | 2.556287 | GCGCAGGGACAGAAAACG | 59.444 | 61.111 | 0.30 | 0.00 | 0.00 | 3.60 |
6843 | 8509 | 2.556287 | CGCGCAGGGACAGAAAAC | 59.444 | 61.111 | 8.75 | 0.00 | 46.37 | 2.43 |
6852 | 8518 | 1.815421 | AAGCTACAATCGCGCAGGG | 60.815 | 57.895 | 8.75 | 0.00 | 44.04 | 4.45 |
6853 | 8519 | 1.349627 | CAAGCTACAATCGCGCAGG | 59.650 | 57.895 | 8.75 | 0.00 | 0.00 | 4.85 |
6854 | 8520 | 1.005975 | GTACAAGCTACAATCGCGCAG | 60.006 | 52.381 | 8.75 | 0.00 | 0.00 | 5.18 |
6855 | 8521 | 0.996462 | GTACAAGCTACAATCGCGCA | 59.004 | 50.000 | 8.75 | 0.00 | 0.00 | 6.09 |
6856 | 8522 | 0.996462 | TGTACAAGCTACAATCGCGC | 59.004 | 50.000 | 0.00 | 0.00 | 0.00 | 6.86 |
6857 | 8523 | 1.007422 | CGTGTACAAGCTACAATCGCG | 60.007 | 52.381 | 0.00 | 0.00 | 0.00 | 5.87 |
6858 | 8524 | 2.027688 | GTCGTGTACAAGCTACAATCGC | 59.972 | 50.000 | 3.67 | 0.00 | 0.00 | 4.58 |
6859 | 8525 | 3.499048 | AGTCGTGTACAAGCTACAATCG | 58.501 | 45.455 | 3.67 | 0.00 | 0.00 | 3.34 |
6860 | 8526 | 5.877031 | TCTAGTCGTGTACAAGCTACAATC | 58.123 | 41.667 | 3.67 | 0.00 | 0.00 | 2.67 |
6861 | 8527 | 5.892160 | TCTAGTCGTGTACAAGCTACAAT | 57.108 | 39.130 | 3.67 | 0.00 | 0.00 | 2.71 |
6862 | 8528 | 5.892160 | ATCTAGTCGTGTACAAGCTACAA | 57.108 | 39.130 | 3.67 | 0.31 | 0.00 | 2.41 |
6863 | 8529 | 6.541278 | ACATATCTAGTCGTGTACAAGCTACA | 59.459 | 38.462 | 3.67 | 0.00 | 0.00 | 2.74 |
6864 | 8530 | 6.957150 | ACATATCTAGTCGTGTACAAGCTAC | 58.043 | 40.000 | 3.67 | 0.00 | 0.00 | 3.58 |
6865 | 8531 | 7.563888 | AACATATCTAGTCGTGTACAAGCTA | 57.436 | 36.000 | 3.67 | 8.03 | 0.00 | 3.32 |
6866 | 8532 | 6.452494 | AACATATCTAGTCGTGTACAAGCT | 57.548 | 37.500 | 3.67 | 7.33 | 0.00 | 3.74 |
6867 | 8533 | 6.530534 | ACAAACATATCTAGTCGTGTACAAGC | 59.469 | 38.462 | 3.67 | 0.00 | 0.00 | 4.01 |
6868 | 8534 | 8.462143 | AACAAACATATCTAGTCGTGTACAAG | 57.538 | 34.615 | 0.00 | 0.00 | 0.00 | 3.16 |
6869 | 8535 | 8.083462 | TGAACAAACATATCTAGTCGTGTACAA | 58.917 | 33.333 | 0.00 | 0.00 | 0.00 | 2.41 |
6870 | 8536 | 7.595604 | TGAACAAACATATCTAGTCGTGTACA | 58.404 | 34.615 | 0.00 | 0.00 | 0.00 | 2.90 |
6871 | 8537 | 8.630278 | ATGAACAAACATATCTAGTCGTGTAC | 57.370 | 34.615 | 0.00 | 0.00 | 0.00 | 2.90 |
6873 | 8539 | 9.647797 | TTAATGAACAAACATATCTAGTCGTGT | 57.352 | 29.630 | 0.00 | 0.00 | 0.00 | 4.49 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.