Multiple sequence alignment - TraesCS7B01G291100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G291100 chr7B 100.000 5763 0 0 1 5763 527855076 527860838 0.000000e+00 10643.0
1 TraesCS7B01G291100 chr7B 93.478 46 3 0 5683 5728 527860870 527860825 1.040000e-07 69.4
2 TraesCS7B01G291100 chr7B 100.000 35 0 0 1530 1564 527856538 527856572 1.340000e-06 65.8
3 TraesCS7B01G291100 chr7B 100.000 35 0 0 1463 1497 527856605 527856639 1.340000e-06 65.8
4 TraesCS7B01G291100 chr7D 90.208 2451 154 49 396 2809 499884103 499886504 0.000000e+00 3118.0
5 TraesCS7B01G291100 chr7D 87.524 1034 39 37 3518 4540 499886871 499887825 0.000000e+00 1112.0
6 TraesCS7B01G291100 chr7D 87.778 810 75 12 4557 5351 499887915 499888715 0.000000e+00 926.0
7 TraesCS7B01G291100 chr7D 96.206 369 13 1 3149 3517 542095366 542095733 2.300000e-168 603.0
8 TraesCS7B01G291100 chr7D 93.651 315 14 2 2834 3148 499886570 499886878 3.140000e-127 466.0
9 TraesCS7B01G291100 chr7D 91.228 171 15 0 5350 5520 499889445 499889615 3.470000e-57 233.0
10 TraesCS7B01G291100 chr7D 89.143 175 17 2 3527 3700 51780725 51780898 3.500000e-52 217.0
11 TraesCS7B01G291100 chr7D 86.667 60 6 2 444 502 533903978 533904036 1.340000e-06 65.8
12 TraesCS7B01G291100 chr7D 97.297 37 0 1 529 565 620126600 620126565 1.730000e-05 62.1
13 TraesCS7B01G291100 chr7A 90.288 1977 138 26 853 2806 565797264 565799209 0.000000e+00 2538.0
14 TraesCS7B01G291100 chr7A 89.817 1257 54 25 3520 4766 565799583 565800775 0.000000e+00 1544.0
15 TraesCS7B01G291100 chr7A 87.395 952 68 20 4753 5685 565800791 565801709 0.000000e+00 1046.0
16 TraesCS7B01G291100 chr7A 88.406 414 44 4 397 810 565795497 565795906 4.010000e-136 496.0
17 TraesCS7B01G291100 chr7A 85.827 381 52 2 1 379 143349619 143349239 2.500000e-108 403.0
18 TraesCS7B01G291100 chr7A 92.143 280 19 1 2834 3113 565799278 565799554 5.410000e-105 392.0
19 TraesCS7B01G291100 chr7A 88.506 174 20 0 3527 3700 54722432 54722605 1.630000e-50 211.0
20 TraesCS7B01G291100 chr7A 98.039 51 1 0 803 853 565796792 565796842 7.950000e-14 89.8
21 TraesCS7B01G291100 chr2D 97.568 370 9 0 3149 3518 624267295 624267664 8.150000e-178 634.0
22 TraesCS7B01G291100 chr2D 82.641 409 55 5 1 394 587269657 587269250 1.190000e-91 348.0
23 TraesCS7B01G291100 chr2D 100.000 32 0 0 5732 5763 300882884 300882853 6.240000e-05 60.2
24 TraesCS7B01G291100 chr3D 97.027 370 11 0 3149 3518 612708222 612707853 1.760000e-174 623.0
25 TraesCS7B01G291100 chr3D 96.216 370 14 0 3149 3518 546702550 546702181 1.780000e-169 606.0
26 TraesCS7B01G291100 chr3D 82.045 401 64 6 1 394 90348081 90348480 9.250000e-88 335.0
27 TraesCS7B01G291100 chr3D 86.559 186 22 3 3527 3711 4292330 4292513 9.790000e-48 202.0
28 TraesCS7B01G291100 chr3D 86.992 123 16 0 1175 1297 4290814 4290936 7.790000e-29 139.0
29 TraesCS7B01G291100 chr5D 96.765 371 12 0 3149 3519 13633508 13633878 2.280000e-173 619.0
30 TraesCS7B01G291100 chr5D 96.496 371 13 0 3149 3519 548078106 548078476 1.060000e-171 614.0
31 TraesCS7B01G291100 chr5D 84.915 411 43 12 1 394 363190497 363190089 1.160000e-106 398.0
32 TraesCS7B01G291100 chr5D 83.429 175 22 4 396 567 327723857 327724027 7.730000e-34 156.0
33 TraesCS7B01G291100 chr5D 81.356 118 17 5 450 566 470057159 470057046 2.210000e-14 91.6
34 TraesCS7B01G291100 chr5D 93.103 58 2 2 444 500 227731731 227731675 3.700000e-12 84.2
35 TraesCS7B01G291100 chr4D 96.757 370 12 0 3149 3518 506622290 506622659 8.200000e-173 617.0
36 TraesCS7B01G291100 chr4D 95.946 370 15 0 3149 3518 500293850 500294219 8.260000e-168 601.0
37 TraesCS7B01G291100 chr1D 96.486 370 13 0 3149 3518 83826339 83825970 3.820000e-171 612.0
38 TraesCS7B01G291100 chr1D 79.487 117 21 3 444 559 436328518 436328632 4.790000e-11 80.5
39 TraesCS7B01G291100 chr4B 86.089 381 47 5 1 379 377793494 377793870 6.950000e-109 405.0
40 TraesCS7B01G291100 chr4B 78.846 104 17 4 465 567 636780033 636779934 1.340000e-06 65.8
41 TraesCS7B01G291100 chr2B 85.086 409 44 8 2 394 158630194 158629787 8.990000e-108 401.0
42 TraesCS7B01G291100 chr2B 81.387 274 45 4 110 379 763524603 763524332 9.720000e-53 219.0
43 TraesCS7B01G291100 chr2B 95.238 42 2 0 5683 5724 781783579 781783538 3.730000e-07 67.6
44 TraesCS7B01G291100 chr2B 95.238 42 1 1 5688 5728 781783498 781783539 1.340000e-06 65.8
45 TraesCS7B01G291100 chr5A 84.146 410 48 11 1 394 574402218 574401810 1.170000e-101 381.0
46 TraesCS7B01G291100 chr5A 82.243 107 16 2 396 500 545834402 545834507 7.950000e-14 89.8
47 TraesCS7B01G291100 chr5A 95.652 46 2 0 5683 5728 669629841 669629796 2.230000e-09 75.0
48 TraesCS7B01G291100 chr3A 83.879 397 45 9 1 379 128289888 128289493 1.530000e-95 361.0
49 TraesCS7B01G291100 chr3A 83.879 397 45 9 1 379 128291393 128290998 1.530000e-95 361.0
50 TraesCS7B01G291100 chr3A 85.965 228 32 0 2317 2544 9932315 9932542 1.600000e-60 244.0
51 TraesCS7B01G291100 chr3A 85.217 230 30 4 2839 3067 9932804 9933030 3.470000e-57 233.0
52 TraesCS7B01G291100 chr3A 84.889 225 34 0 2844 3068 10167309 10167533 1.620000e-55 228.0
53 TraesCS7B01G291100 chr3A 86.022 186 22 4 3527 3711 9882741 9882923 4.560000e-46 196.0
54 TraesCS7B01G291100 chr3A 86.188 181 25 0 3528 3708 9933140 9933320 4.560000e-46 196.0
55 TraesCS7B01G291100 chr3A 78.696 230 46 1 3983 4209 9933589 9933818 3.600000e-32 150.0
56 TraesCS7B01G291100 chr6A 83.461 393 51 10 1 379 115035557 115035165 2.550000e-93 353.0
57 TraesCS7B01G291100 chr6A 81.148 122 21 2 450 571 585807937 585808056 4.750000e-16 97.1
58 TraesCS7B01G291100 chr6B 80.952 399 67 9 1 394 592470994 592470600 2.020000e-79 307.0
59 TraesCS7B01G291100 chr6B 79.651 172 27 6 397 564 693067785 693067618 3.650000e-22 117.0
60 TraesCS7B01G291100 chr6B 95.238 42 2 0 5683 5724 719861553 719861594 3.730000e-07 67.6
61 TraesCS7B01G291100 chr6B 88.462 52 6 0 5677 5728 25403914 25403965 4.820000e-06 63.9
62 TraesCS7B01G291100 chr3B 82.462 325 46 9 72 391 675153062 675152744 2.050000e-69 274.0
63 TraesCS7B01G291100 chr3B 84.716 229 32 3 2845 3072 6557217 6557443 5.810000e-55 226.0
64 TraesCS7B01G291100 chr3B 82.301 226 40 0 2848 3073 6679363 6679588 4.560000e-46 196.0
65 TraesCS7B01G291100 chrUn 84.956 226 31 3 2848 3072 35373836 35373613 5.810000e-55 226.0
66 TraesCS7B01G291100 chrUn 88.636 176 18 2 3527 3701 35855766 35855592 4.520000e-51 213.0
67 TraesCS7B01G291100 chrUn 88.636 176 18 2 3527 3701 299959675 299959849 4.520000e-51 213.0
68 TraesCS7B01G291100 chr2A 81.356 118 17 5 448 564 720397811 720397924 2.210000e-14 91.6
69 TraesCS7B01G291100 chr4A 95.652 46 2 0 5683 5728 20263342 20263297 2.230000e-09 75.0
70 TraesCS7B01G291100 chr4A 93.617 47 3 0 5682 5728 669583272 669583226 2.880000e-08 71.3
71 TraesCS7B01G291100 chr1A 93.478 46 3 0 5683 5728 297696526 297696481 1.040000e-07 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G291100 chr7B 527855076 527860838 5762 False 10643.000000 10643 100.000000 1 5763 1 chr7B.!!$F1 5762
1 TraesCS7B01G291100 chr7D 499884103 499889615 5512 False 1171.000000 3118 90.077800 396 5520 5 chr7D.!!$F4 5124
2 TraesCS7B01G291100 chr7A 565795497 565801709 6212 False 1017.633333 2538 91.014667 397 5685 6 chr7A.!!$F2 5288
3 TraesCS7B01G291100 chr3A 128289493 128291393 1900 True 361.000000 361 83.879000 1 379 2 chr3A.!!$R1 378
4 TraesCS7B01G291100 chr3A 9932315 9933818 1503 False 205.750000 244 84.016500 2317 4209 4 chr3A.!!$F3 1892

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
521 620 0.173708 GTCTTCCTCTGTTCGCGGAT 59.826 55.0 6.13 0.0 0.00 4.18 F
1249 2764 0.036858 AGCTCTTCCTCTTGGTTCGC 60.037 55.0 0.00 0.0 34.23 4.70 F
2996 4594 0.390472 CCAGGCGAGAGTTGAAGGAC 60.390 60.0 0.00 0.0 0.00 3.85 F
3190 4804 0.172578 GCAATTTTACCGAGGGGCAC 59.827 55.0 0.00 0.0 36.48 5.01 F
3200 4814 0.179056 CGAGGGGCACGGATAAATGT 60.179 55.0 0.00 0.0 0.00 2.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1344 2859 0.247185 CGCGGGGGAGTTACAACTTA 59.753 55.000 0.00 0.0 39.88 2.24 R
3183 4797 0.106719 CCACATTTATCCGTGCCCCT 60.107 55.000 0.00 0.0 0.00 4.79 R
4546 6598 0.853419 GAGCCGTGCTTATCTTACGC 59.147 55.000 0.00 0.0 39.88 4.42 R
4555 6607 0.947244 CAAGTCAAAGAGCCGTGCTT 59.053 50.000 0.00 0.0 39.88 3.91 R
4905 7060 1.271434 ACCCGGAGAAGAAAAAGAGCC 60.271 52.381 0.73 0.0 0.00 4.70 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 1.061546 TCCTTCGTGGGCTACCTTTT 58.938 50.000 0.00 0.00 37.76 2.27
27 28 2.642154 TCGTGGGCTACCTTTTTCAA 57.358 45.000 0.00 0.00 37.76 2.69
35 36 3.056821 GGCTACCTTTTTCAACACCATCC 60.057 47.826 0.00 0.00 0.00 3.51
36 37 3.826729 GCTACCTTTTTCAACACCATCCT 59.173 43.478 0.00 0.00 0.00 3.24
42 43 5.304357 CCTTTTTCAACACCATCCTTAACCT 59.696 40.000 0.00 0.00 0.00 3.50
44 45 7.309194 CCTTTTTCAACACCATCCTTAACCTAG 60.309 40.741 0.00 0.00 0.00 3.02
47 48 6.195600 TCAACACCATCCTTAACCTAGTTT 57.804 37.500 0.00 0.00 0.00 2.66
48 49 6.607019 TCAACACCATCCTTAACCTAGTTTT 58.393 36.000 0.00 0.00 0.00 2.43
49 50 6.713450 TCAACACCATCCTTAACCTAGTTTTC 59.287 38.462 0.00 0.00 0.00 2.29
50 51 6.449830 ACACCATCCTTAACCTAGTTTTCT 57.550 37.500 0.00 0.00 0.00 2.52
52 53 7.621796 ACACCATCCTTAACCTAGTTTTCTAG 58.378 38.462 0.00 0.00 46.78 2.43
77 78 4.590850 AAGTCTCATTTTGCCCAAAGAC 57.409 40.909 3.53 3.53 0.00 3.01
94 95 5.182760 CCAAAGACAAGAAGCAGCTAGAAAT 59.817 40.000 0.00 0.00 0.00 2.17
98 99 6.882656 AGACAAGAAGCAGCTAGAAATGATA 58.117 36.000 0.00 0.00 0.00 2.15
101 102 6.709846 ACAAGAAGCAGCTAGAAATGATATCC 59.290 38.462 0.00 0.00 0.00 2.59
108 109 5.248020 CAGCTAGAAATGATATCCAGAGGGT 59.752 44.000 0.00 0.00 34.93 4.34
121 122 3.519510 TCCAGAGGGTATTTGGAGTTCTG 59.480 47.826 0.00 0.00 36.13 3.02
122 123 3.274288 CAGAGGGTATTTGGAGTTCTGC 58.726 50.000 0.00 0.00 0.00 4.26
123 124 2.912956 AGAGGGTATTTGGAGTTCTGCA 59.087 45.455 0.00 0.00 0.00 4.41
124 125 3.054802 AGAGGGTATTTGGAGTTCTGCAG 60.055 47.826 7.63 7.63 0.00 4.41
125 126 2.025887 AGGGTATTTGGAGTTCTGCAGG 60.026 50.000 15.13 0.00 0.00 4.85
126 127 2.290960 GGGTATTTGGAGTTCTGCAGGT 60.291 50.000 15.13 0.00 0.00 4.00
127 128 3.010420 GGTATTTGGAGTTCTGCAGGTC 58.990 50.000 15.13 8.42 0.00 3.85
129 130 0.250295 TTTGGAGTTCTGCAGGTCCG 60.250 55.000 15.13 0.00 31.05 4.79
134 138 1.264288 GAGTTCTGCAGGTCCGTTTTG 59.736 52.381 15.13 0.00 0.00 2.44
143 147 2.794350 CAGGTCCGTTTTGCAATTGTTC 59.206 45.455 7.40 0.00 0.00 3.18
167 172 3.266772 TGGACCTGCTAAACAATGGATCT 59.733 43.478 0.00 0.00 0.00 2.75
169 174 5.059833 GGACCTGCTAAACAATGGATCTAG 58.940 45.833 0.00 0.00 0.00 2.43
223 228 4.879067 GATCATGCACAATATGATCGTCG 58.121 43.478 10.59 0.00 46.22 5.12
225 230 3.983344 TCATGCACAATATGATCGTCGAG 59.017 43.478 0.00 0.00 30.03 4.04
235 252 2.355445 GATCGTCGAGGATGCTGCCA 62.355 60.000 24.24 0.00 0.00 4.92
237 254 2.887568 GTCGAGGATGCTGCCACG 60.888 66.667 0.00 8.45 42.30 4.94
238 255 3.381983 TCGAGGATGCTGCCACGT 61.382 61.111 12.87 0.00 41.75 4.49
250 267 3.194755 TGCTGCCACGTCTCTAGAATTTA 59.805 43.478 0.00 0.00 0.00 1.40
255 272 6.460781 TGCCACGTCTCTAGAATTTAAGAAA 58.539 36.000 0.00 0.00 0.00 2.52
258 275 7.905493 GCCACGTCTCTAGAATTTAAGAAAATG 59.095 37.037 0.00 0.00 35.46 2.32
260 277 8.936864 CACGTCTCTAGAATTTAAGAAAATGGT 58.063 33.333 0.00 0.00 35.46 3.55
280 297 4.224147 TGGTTGATCCTATCGAACTTCCAA 59.776 41.667 0.00 0.00 37.07 3.53
283 300 4.766375 TGATCCTATCGAACTTCCAAACC 58.234 43.478 0.00 0.00 0.00 3.27
293 310 3.059352 ACTTCCAAACCAGAATCCGAG 57.941 47.619 0.00 0.00 0.00 4.63
294 311 2.372172 ACTTCCAAACCAGAATCCGAGT 59.628 45.455 0.00 0.00 0.00 4.18
305 322 4.572389 CCAGAATCCGAGTACATTTGAAGG 59.428 45.833 0.00 0.00 0.00 3.46
306 323 4.034510 CAGAATCCGAGTACATTTGAAGGC 59.965 45.833 0.00 0.00 0.00 4.35
340 357 3.357021 CATCAACAAATTCGGCATCGAG 58.643 45.455 0.00 0.00 46.75 4.04
369 386 2.360483 CGAGCAGCTGAAGGAAGATCTA 59.640 50.000 20.43 0.00 0.00 1.98
370 387 3.005684 CGAGCAGCTGAAGGAAGATCTAT 59.994 47.826 20.43 0.00 0.00 1.98
372 389 4.706035 AGCAGCTGAAGGAAGATCTATTG 58.294 43.478 20.43 0.00 0.00 1.90
373 390 4.408270 AGCAGCTGAAGGAAGATCTATTGA 59.592 41.667 20.43 0.00 0.00 2.57
374 391 4.751098 GCAGCTGAAGGAAGATCTATTGAG 59.249 45.833 20.43 0.00 0.00 3.02
375 392 4.751098 CAGCTGAAGGAAGATCTATTGAGC 59.249 45.833 8.42 14.67 0.00 4.26
376 393 4.408270 AGCTGAAGGAAGATCTATTGAGCA 59.592 41.667 20.66 6.67 0.00 4.26
377 394 5.072058 AGCTGAAGGAAGATCTATTGAGCAT 59.928 40.000 20.66 9.39 0.00 3.79
378 395 5.409214 GCTGAAGGAAGATCTATTGAGCATC 59.591 44.000 16.48 1.27 0.00 3.91
379 396 6.742082 GCTGAAGGAAGATCTATTGAGCATCT 60.742 42.308 16.48 0.00 34.92 2.90
380 397 7.134362 TGAAGGAAGATCTATTGAGCATCTT 57.866 36.000 0.00 0.00 39.17 2.40
381 398 7.215789 TGAAGGAAGATCTATTGAGCATCTTC 58.784 38.462 11.00 11.00 46.44 2.87
384 401 6.689178 GAAGATCTATTGAGCATCTTCGAC 57.311 41.667 0.00 0.00 41.49 4.20
386 403 3.355626 TCTATTGAGCATCTTCGACGG 57.644 47.619 0.00 0.00 34.92 4.79
387 404 2.688446 TCTATTGAGCATCTTCGACGGT 59.312 45.455 0.00 0.00 34.92 4.83
389 406 0.601057 TTGAGCATCTTCGACGGTCA 59.399 50.000 9.10 0.00 30.61 4.02
390 407 0.601057 TGAGCATCTTCGACGGTCAA 59.399 50.000 9.10 1.39 29.59 3.18
391 408 1.000394 TGAGCATCTTCGACGGTCAAA 60.000 47.619 9.10 0.00 29.59 2.69
392 409 1.656095 GAGCATCTTCGACGGTCAAAG 59.344 52.381 9.10 5.68 0.00 2.77
393 410 0.721718 GCATCTTCGACGGTCAAAGG 59.278 55.000 8.84 0.00 0.00 3.11
404 503 2.504175 ACGGTCAAAGGCCTATGTATGT 59.496 45.455 5.16 0.00 0.00 2.29
413 512 6.448369 AAGGCCTATGTATGTGGCTATTTA 57.552 37.500 5.16 0.00 45.45 1.40
430 529 5.739161 GCTATTTAAACATGCGGACTTTCAG 59.261 40.000 0.00 0.00 0.00 3.02
488 587 3.474570 GGTCGGCTCCTGCATCCT 61.475 66.667 0.00 0.00 41.91 3.24
521 620 0.173708 GTCTTCCTCTGTTCGCGGAT 59.826 55.000 6.13 0.00 0.00 4.18
523 622 2.097036 TCTTCCTCTGTTCGCGGATAA 58.903 47.619 6.13 0.00 0.00 1.75
549 648 1.534729 GAGGAAATTTGCGGGTCACT 58.465 50.000 3.87 0.00 0.00 3.41
586 685 6.763610 CCTTATTGATCTAAGTGGTTGAGACC 59.236 42.308 0.00 0.00 46.71 3.85
610 709 9.594478 ACCGAAAGAAACTATTTGAACATTTTT 57.406 25.926 0.00 0.00 0.00 1.94
668 769 8.924511 ATTGATCTAAGTGGTTGAGAAGAAAA 57.075 30.769 0.00 0.00 0.00 2.29
670 771 8.154649 TGATCTAAGTGGTTGAGAAGAAAAAC 57.845 34.615 0.00 0.00 0.00 2.43
946 2461 6.929606 ACCTAACACACAACAGATACTCTTTC 59.070 38.462 0.00 0.00 0.00 2.62
1011 2526 2.171079 GGCAACGATGATCGGCGAA 61.171 57.895 19.82 0.00 45.59 4.70
1098 2613 4.503817 GGGTTCTTAGGAAAAGGTACGTGT 60.504 45.833 0.00 0.00 32.81 4.49
1178 2693 2.609459 CCATACGCTGGTTGTTCTGATC 59.391 50.000 0.00 0.00 40.49 2.92
1179 2694 3.525537 CATACGCTGGTTGTTCTGATCT 58.474 45.455 0.00 0.00 0.00 2.75
1249 2764 0.036858 AGCTCTTCCTCTTGGTTCGC 60.037 55.000 0.00 0.00 34.23 4.70
1299 2814 3.594134 GGATTCAGACTGAGGTGAAGTG 58.406 50.000 5.10 0.00 36.16 3.16
1309 2824 4.818546 ACTGAGGTGAAGTGTTTCATTCTG 59.181 41.667 0.00 2.95 44.62 3.02
1314 2829 3.057946 GTGAAGTGTTTCATTCTGGCCTC 60.058 47.826 3.32 0.00 44.62 4.70
1315 2830 3.181440 TGAAGTGTTTCATTCTGGCCTCT 60.181 43.478 3.32 0.00 38.37 3.69
1317 2832 2.641815 AGTGTTTCATTCTGGCCTCTCT 59.358 45.455 3.32 0.00 0.00 3.10
1322 2837 3.113191 TCATTCTGGCCTCTCTCTCTT 57.887 47.619 3.32 0.00 0.00 2.85
1324 2839 3.197333 TCATTCTGGCCTCTCTCTCTTTG 59.803 47.826 3.32 0.00 0.00 2.77
1325 2840 2.612285 TCTGGCCTCTCTCTCTTTGA 57.388 50.000 3.32 0.00 0.00 2.69
1332 2847 4.442753 GGCCTCTCTCTCTTTGATTTCGAT 60.443 45.833 0.00 0.00 0.00 3.59
1333 2848 5.221342 GGCCTCTCTCTCTTTGATTTCGATA 60.221 44.000 0.00 0.00 0.00 2.92
1342 2857 8.777865 TCTCTTTGATTTCGATAACATGTCTT 57.222 30.769 0.00 0.00 0.00 3.01
1343 2858 8.659491 TCTCTTTGATTTCGATAACATGTCTTG 58.341 33.333 0.00 0.00 0.00 3.02
1344 2859 8.322906 TCTTTGATTTCGATAACATGTCTTGT 57.677 30.769 0.00 0.00 41.53 3.16
1345 2860 9.430623 TCTTTGATTTCGATAACATGTCTTGTA 57.569 29.630 0.00 0.00 37.68 2.41
1348 2863 8.771920 TGATTTCGATAACATGTCTTGTAAGT 57.228 30.769 0.00 0.00 37.68 2.24
1349 2864 9.214957 TGATTTCGATAACATGTCTTGTAAGTT 57.785 29.630 0.00 0.00 37.68 2.66
1358 2873 5.995897 ACATGTCTTGTAAGTTGTAACTCCC 59.004 40.000 0.00 0.00 38.57 4.30
1359 2874 4.964593 TGTCTTGTAAGTTGTAACTCCCC 58.035 43.478 0.00 0.00 38.57 4.81
1375 2890 2.380410 CCCCGCGTCTGAACTTTCG 61.380 63.158 4.92 0.00 0.00 3.46
1384 2899 2.223377 GTCTGAACTTTCGTCGCCATTT 59.777 45.455 0.00 0.00 0.00 2.32
1385 2900 2.875933 TCTGAACTTTCGTCGCCATTTT 59.124 40.909 0.00 0.00 0.00 1.82
1386 2901 4.059511 TCTGAACTTTCGTCGCCATTTTA 58.940 39.130 0.00 0.00 0.00 1.52
1387 2902 4.512198 TCTGAACTTTCGTCGCCATTTTAA 59.488 37.500 0.00 0.00 0.00 1.52
1388 2903 5.180492 TCTGAACTTTCGTCGCCATTTTAAT 59.820 36.000 0.00 0.00 0.00 1.40
1395 2910 4.477780 TCGTCGCCATTTTAATTTGTTCC 58.522 39.130 0.00 0.00 0.00 3.62
1396 2911 3.299542 CGTCGCCATTTTAATTTGTTCCG 59.700 43.478 0.00 0.00 0.00 4.30
1417 2932 4.035208 CCGGACAATACAATCCTTGCTTAC 59.965 45.833 0.00 0.00 32.33 2.34
1435 2950 6.219473 TGCTTACTTTCTGAACTTCTCTCTG 58.781 40.000 0.00 0.00 0.00 3.35
1460 2975 4.771114 TTCAAGAACAGAGGGAACTTCA 57.229 40.909 0.00 0.00 44.43 3.02
1461 2976 4.342862 TCAAGAACAGAGGGAACTTCAG 57.657 45.455 0.00 0.00 44.43 3.02
1462 2977 3.967326 TCAAGAACAGAGGGAACTTCAGA 59.033 43.478 0.00 0.00 44.43 3.27
1463 2978 4.408921 TCAAGAACAGAGGGAACTTCAGAA 59.591 41.667 0.00 0.00 44.43 3.02
1464 2979 5.104527 TCAAGAACAGAGGGAACTTCAGAAA 60.105 40.000 0.00 0.00 44.43 2.52
1465 2980 5.574970 AGAACAGAGGGAACTTCAGAAAT 57.425 39.130 0.00 0.00 44.43 2.17
1466 2981 6.688073 AGAACAGAGGGAACTTCAGAAATA 57.312 37.500 0.00 0.00 44.43 1.40
1467 2982 7.264294 AGAACAGAGGGAACTTCAGAAATAT 57.736 36.000 0.00 0.00 44.43 1.28
1469 2984 8.482128 AGAACAGAGGGAACTTCAGAAATATAG 58.518 37.037 0.00 0.00 44.43 1.31
1470 2985 7.130681 ACAGAGGGAACTTCAGAAATATAGG 57.869 40.000 0.00 0.00 44.43 2.57
1471 2986 6.674419 ACAGAGGGAACTTCAGAAATATAGGT 59.326 38.462 0.00 0.00 44.43 3.08
1472 2987 6.989169 CAGAGGGAACTTCAGAAATATAGGTG 59.011 42.308 0.00 0.00 44.43 4.00
1474 2989 7.570607 AGAGGGAACTTCAGAAATATAGGTGAT 59.429 37.037 0.00 0.00 44.43 3.06
1475 2990 7.512992 AGGGAACTTCAGAAATATAGGTGATG 58.487 38.462 0.00 0.00 37.44 3.07
1476 2991 7.127955 AGGGAACTTCAGAAATATAGGTGATGT 59.872 37.037 0.00 0.00 37.44 3.06
1477 2992 7.442666 GGGAACTTCAGAAATATAGGTGATGTC 59.557 40.741 0.00 0.00 0.00 3.06
1481 2996 9.739276 ACTTCAGAAATATAGGTGATGTCAAAA 57.261 29.630 0.00 0.00 0.00 2.44
1482 2997 9.994432 CTTCAGAAATATAGGTGATGTCAAAAC 57.006 33.333 0.00 0.00 0.00 2.43
1483 2998 9.739276 TTCAGAAATATAGGTGATGTCAAAACT 57.261 29.630 0.00 0.00 0.00 2.66
1484 2999 9.383519 TCAGAAATATAGGTGATGTCAAAACTC 57.616 33.333 0.00 0.00 0.00 3.01
1485 3000 8.331022 CAGAAATATAGGTGATGTCAAAACTCG 58.669 37.037 0.00 0.00 0.00 4.18
1486 3001 8.041323 AGAAATATAGGTGATGTCAAAACTCGT 58.959 33.333 0.00 0.00 0.00 4.18
1488 3003 8.644318 AATATAGGTGATGTCAAAACTCGTAC 57.356 34.615 0.00 0.00 0.00 3.67
1489 3004 4.602340 AGGTGATGTCAAAACTCGTACT 57.398 40.909 0.00 0.00 0.00 2.73
1491 3006 3.120649 GGTGATGTCAAAACTCGTACTGC 60.121 47.826 0.00 0.00 0.00 4.40
1504 3019 2.726832 GTACTGCACGGAGAGAAGTT 57.273 50.000 0.00 0.00 0.00 2.66
1505 3020 2.597520 GTACTGCACGGAGAGAAGTTC 58.402 52.381 0.00 0.00 0.00 3.01
1506 3021 1.040646 ACTGCACGGAGAGAAGTTCA 58.959 50.000 5.50 0.00 0.00 3.18
1507 3022 1.000283 ACTGCACGGAGAGAAGTTCAG 60.000 52.381 5.50 0.00 37.57 3.02
1508 3023 1.000283 CTGCACGGAGAGAAGTTCAGT 60.000 52.381 5.50 0.00 29.35 3.41
1510 3025 2.826128 TGCACGGAGAGAAGTTCAGTAT 59.174 45.455 5.50 0.00 0.00 2.12
1511 3026 3.258372 TGCACGGAGAGAAGTTCAGTATT 59.742 43.478 5.50 0.00 0.00 1.89
1552 3074 6.907212 GCAAATATAGGTGATGTCAAAACTCG 59.093 38.462 0.00 0.00 0.00 4.18
1616 3139 4.143179 GCTTTGCTCACAAAAGATTCATGC 60.143 41.667 0.25 0.00 44.90 4.06
1658 3181 7.103641 TGGTTTAAAGTAGATAGGCACTTGAG 58.896 38.462 0.00 0.00 41.75 3.02
1703 3226 5.509716 TCTTTTTCGAAAAGGAGGGAAAC 57.490 39.130 26.07 0.00 31.48 2.78
1732 3255 5.179182 CGGGCTCAGCAACAAAAATAATTTT 59.821 36.000 0.00 0.00 39.30 1.82
1752 3275 5.837586 TTTGCTGAAAGTTGTTTGTTGTC 57.162 34.783 0.00 0.00 35.30 3.18
1767 3290 9.474920 TTGTTTGTTGTCTTGATCAATAATTCC 57.525 29.630 8.96 0.00 0.00 3.01
1877 3400 4.603131 ACTTCAATCAGCCATACACCAAT 58.397 39.130 0.00 0.00 0.00 3.16
1926 3449 1.962100 GTCCACCGATAGAAGTAGGGG 59.038 57.143 0.00 0.00 39.76 4.79
1971 3494 8.664669 AGACAATTAAATTTACTCCACCCATT 57.335 30.769 0.00 0.00 0.00 3.16
1972 3495 8.749354 AGACAATTAAATTTACTCCACCCATTC 58.251 33.333 0.00 0.00 0.00 2.67
1973 3496 8.429237 ACAATTAAATTTACTCCACCCATTCA 57.571 30.769 0.00 0.00 0.00 2.57
1974 3497 8.311109 ACAATTAAATTTACTCCACCCATTCAC 58.689 33.333 0.00 0.00 0.00 3.18
2060 3591 6.658391 GTGGAGTAAAGACAGTAGAGTAGGAA 59.342 42.308 0.00 0.00 0.00 3.36
2067 3598 2.494073 ACAGTAGAGTAGGAAGCAGTGC 59.506 50.000 7.13 7.13 0.00 4.40
2086 3617 4.644685 AGTGCCAAATTACCGCAAATATCT 59.355 37.500 0.00 0.00 33.57 1.98
2132 3663 2.749621 CACGAAAAAGGGAGAAGGATGG 59.250 50.000 0.00 0.00 0.00 3.51
2139 3670 3.558608 AGGGAGAAGGATGGGAGATAG 57.441 52.381 0.00 0.00 0.00 2.08
2157 3688 5.307204 AGATAGATGGACACGGTAGTAGTC 58.693 45.833 0.00 0.00 0.00 2.59
2171 3712 1.004979 AGTAGTCGAGGCTTCTCCAGT 59.995 52.381 0.00 0.00 37.29 4.00
2190 3731 5.359576 TCCAGTGCACTTGACAAATAAACTT 59.640 36.000 18.94 0.00 0.00 2.66
2195 3736 9.816354 AGTGCACTTGACAAATAAACTTAAAAT 57.184 25.926 15.25 0.00 0.00 1.82
2235 3776 7.661437 TGAATCTAGTAACAAGTCTGCAATTGT 59.339 33.333 7.40 5.93 41.28 2.71
2272 3816 4.471747 ACTTCTCAGAAATACTTCCTCCCC 59.528 45.833 0.00 0.00 31.28 4.81
2520 4064 2.130395 CATCGTCAACATAGCTGCGAT 58.870 47.619 0.00 0.00 39.24 4.58
2638 4182 8.066595 CAGTGCATGTATTTGTAAGAGATTAGC 58.933 37.037 0.00 0.00 0.00 3.09
2643 4190 8.982685 CATGTATTTGTAAGAGATTAGCGACAT 58.017 33.333 0.00 0.00 0.00 3.06
2644 4191 8.352752 TGTATTTGTAAGAGATTAGCGACATG 57.647 34.615 0.00 0.00 0.00 3.21
2650 4197 7.363431 TGTAAGAGATTAGCGACATGACATAG 58.637 38.462 0.00 0.00 0.00 2.23
2717 4269 1.060698 GACGTGGCTTTCGATGCTAAC 59.939 52.381 0.00 8.34 0.00 2.34
2720 4272 1.075542 TGGCTTTCGATGCTAACGTG 58.924 50.000 10.11 0.00 0.00 4.49
2802 4354 4.222336 TCATGTTTCAACTGGTGGGAAAT 58.778 39.130 0.00 0.00 33.58 2.17
2805 4357 4.026744 TGTTTCAACTGGTGGGAAATCAA 58.973 39.130 0.00 0.00 33.58 2.57
2806 4358 4.653341 TGTTTCAACTGGTGGGAAATCAAT 59.347 37.500 0.00 0.00 33.58 2.57
2808 4360 6.325028 TGTTTCAACTGGTGGGAAATCAATAA 59.675 34.615 0.00 0.00 33.58 1.40
2809 4361 6.588719 TTCAACTGGTGGGAAATCAATAAG 57.411 37.500 0.00 0.00 0.00 1.73
2810 4362 5.886609 TCAACTGGTGGGAAATCAATAAGA 58.113 37.500 0.00 0.00 0.00 2.10
2817 4386 6.122277 GGTGGGAAATCAATAAGACTGATCA 58.878 40.000 0.00 0.00 32.26 2.92
2829 4398 3.959293 AGACTGATCAATGCATTGTGGA 58.041 40.909 32.67 18.49 38.84 4.02
2830 4399 4.533815 AGACTGATCAATGCATTGTGGAT 58.466 39.130 32.67 21.94 38.84 3.41
2832 4401 6.124340 AGACTGATCAATGCATTGTGGATTA 58.876 36.000 32.67 18.00 36.23 1.75
2982 4580 1.774110 TCTGATCAGAGAGACCAGGC 58.226 55.000 21.67 0.00 32.82 4.85
2988 4586 0.679640 CAGAGAGACCAGGCGAGAGT 60.680 60.000 0.00 0.00 0.00 3.24
2995 4593 0.832135 ACCAGGCGAGAGTTGAAGGA 60.832 55.000 0.00 0.00 0.00 3.36
2996 4594 0.390472 CCAGGCGAGAGTTGAAGGAC 60.390 60.000 0.00 0.00 0.00 3.85
3078 4692 7.017645 GTCAGACATAAACAACAACAGCATAG 58.982 38.462 0.00 0.00 0.00 2.23
3115 4729 3.141398 TCTTTCTGCTGCAACTGGTTAG 58.859 45.455 3.02 0.00 0.00 2.34
3116 4730 1.238439 TTCTGCTGCAACTGGTTAGC 58.762 50.000 3.02 0.00 36.72 3.09
3117 4731 0.606401 TCTGCTGCAACTGGTTAGCC 60.606 55.000 3.02 0.00 35.36 3.93
3118 4732 0.607489 CTGCTGCAACTGGTTAGCCT 60.607 55.000 3.02 0.00 35.36 4.58
3121 4735 2.159382 GCTGCAACTGGTTAGCCTTAA 58.841 47.619 0.00 0.00 35.27 1.85
3128 4742 5.723295 CAACTGGTTAGCCTTAATGCAATT 58.277 37.500 5.50 0.00 36.54 2.32
3149 4763 4.270245 TCTGACACATCTGTTACATGCA 57.730 40.909 0.00 0.00 0.00 3.96
3150 4764 4.640364 TCTGACACATCTGTTACATGCAA 58.360 39.130 0.00 0.00 0.00 4.08
3151 4765 4.692155 TCTGACACATCTGTTACATGCAAG 59.308 41.667 0.00 0.00 0.00 4.01
3152 4766 3.752747 TGACACATCTGTTACATGCAAGG 59.247 43.478 0.00 0.00 0.00 3.61
3153 4767 3.753272 GACACATCTGTTACATGCAAGGT 59.247 43.478 0.00 0.00 32.53 3.50
3155 4769 4.584325 ACACATCTGTTACATGCAAGGTTT 59.416 37.500 0.00 0.00 28.09 3.27
3156 4770 5.068987 ACACATCTGTTACATGCAAGGTTTT 59.931 36.000 0.00 0.00 28.09 2.43
3157 4771 5.403166 CACATCTGTTACATGCAAGGTTTTG 59.597 40.000 0.00 0.00 37.36 2.44
3158 4772 4.582701 TCTGTTACATGCAAGGTTTTGG 57.417 40.909 0.00 0.00 34.79 3.28
3159 4773 3.957497 TCTGTTACATGCAAGGTTTTGGT 59.043 39.130 0.00 0.00 34.79 3.67
3160 4774 4.404073 TCTGTTACATGCAAGGTTTTGGTT 59.596 37.500 0.00 0.00 34.79 3.67
3161 4775 5.594725 TCTGTTACATGCAAGGTTTTGGTTA 59.405 36.000 0.00 0.00 34.79 2.85
3162 4776 5.593010 TGTTACATGCAAGGTTTTGGTTAC 58.407 37.500 0.00 0.00 34.79 2.50
3163 4777 3.744238 ACATGCAAGGTTTTGGTTACC 57.256 42.857 0.00 0.00 34.79 2.85
3164 4778 2.035321 ACATGCAAGGTTTTGGTTACCG 59.965 45.455 0.00 0.00 40.69 4.02
3165 4779 2.054232 TGCAAGGTTTTGGTTACCGA 57.946 45.000 0.00 0.00 40.69 4.69
3166 4780 2.376109 TGCAAGGTTTTGGTTACCGAA 58.624 42.857 0.00 0.00 40.69 4.30
3167 4781 2.959707 TGCAAGGTTTTGGTTACCGAAT 59.040 40.909 4.72 0.00 40.69 3.34
3168 4782 4.142790 TGCAAGGTTTTGGTTACCGAATA 58.857 39.130 4.72 0.00 40.69 1.75
3169 4783 4.583489 TGCAAGGTTTTGGTTACCGAATAA 59.417 37.500 4.72 0.00 40.69 1.40
3170 4784 5.158494 GCAAGGTTTTGGTTACCGAATAAG 58.842 41.667 4.72 0.00 40.69 1.73
3171 4785 5.705902 CAAGGTTTTGGTTACCGAATAAGG 58.294 41.667 4.72 0.00 40.69 2.69
3172 4786 3.760151 AGGTTTTGGTTACCGAATAAGGC 59.240 43.478 4.72 0.00 40.69 4.35
3173 4787 3.506844 GGTTTTGGTTACCGAATAAGGCA 59.493 43.478 4.72 0.00 33.69 4.75
3175 4789 5.336929 GGTTTTGGTTACCGAATAAGGCAAT 60.337 40.000 4.72 0.00 33.69 3.56
3176 4790 5.986501 TTTGGTTACCGAATAAGGCAATT 57.013 34.783 0.00 0.00 33.69 2.32
3177 4791 5.986501 TTGGTTACCGAATAAGGCAATTT 57.013 34.783 0.00 0.00 33.69 1.82
3179 4793 7.463961 TTGGTTACCGAATAAGGCAATTTTA 57.536 32.000 0.00 0.00 33.69 1.52
3180 4794 6.854778 TGGTTACCGAATAAGGCAATTTTAC 58.145 36.000 0.00 0.00 33.69 2.01
3181 4795 6.127675 TGGTTACCGAATAAGGCAATTTTACC 60.128 38.462 0.00 0.00 33.69 2.85
3182 4796 4.625972 ACCGAATAAGGCAATTTTACCG 57.374 40.909 0.00 0.00 33.69 4.02
3183 4797 4.263435 ACCGAATAAGGCAATTTTACCGA 58.737 39.130 0.00 0.00 33.69 4.69
3184 4798 4.334481 ACCGAATAAGGCAATTTTACCGAG 59.666 41.667 0.00 0.00 33.69 4.63
3185 4799 4.261031 CCGAATAAGGCAATTTTACCGAGG 60.261 45.833 0.00 0.00 0.00 4.63
3186 4800 4.261031 CGAATAAGGCAATTTTACCGAGGG 60.261 45.833 0.00 0.00 0.00 4.30
3187 4801 1.847328 AAGGCAATTTTACCGAGGGG 58.153 50.000 0.00 0.00 40.11 4.79
3189 4803 0.968393 GGCAATTTTACCGAGGGGCA 60.968 55.000 0.00 0.00 36.48 5.36
3190 4804 0.172578 GCAATTTTACCGAGGGGCAC 59.827 55.000 0.00 0.00 36.48 5.01
3200 4814 0.179056 CGAGGGGCACGGATAAATGT 60.179 55.000 0.00 0.00 0.00 2.71
3201 4815 1.308998 GAGGGGCACGGATAAATGTG 58.691 55.000 0.00 0.00 39.10 3.21
3203 4817 0.395173 GGGGCACGGATAAATGTGGT 60.395 55.000 0.00 0.00 36.61 4.16
3204 4818 1.470051 GGGCACGGATAAATGTGGTT 58.530 50.000 0.00 0.00 36.61 3.67
3205 4819 2.645802 GGGCACGGATAAATGTGGTTA 58.354 47.619 0.00 0.00 36.61 2.85
3206 4820 2.356695 GGGCACGGATAAATGTGGTTAC 59.643 50.000 0.00 0.00 36.61 2.50
3207 4821 2.356695 GGCACGGATAAATGTGGTTACC 59.643 50.000 0.00 0.00 36.61 2.85
3208 4822 3.011119 GCACGGATAAATGTGGTTACCA 58.989 45.455 0.00 0.00 36.61 3.25
3231 4845 4.376340 GGTTACCGAGAAATACCGAGAA 57.624 45.455 0.00 0.00 0.00 2.87
3232 4846 4.941657 GGTTACCGAGAAATACCGAGAAT 58.058 43.478 0.00 0.00 0.00 2.40
3234 4848 6.685657 GGTTACCGAGAAATACCGAGAATAT 58.314 40.000 0.00 0.00 0.00 1.28
3235 4849 7.150640 GGTTACCGAGAAATACCGAGAATATT 58.849 38.462 0.00 0.00 0.00 1.28
3236 4850 7.654923 GGTTACCGAGAAATACCGAGAATATTT 59.345 37.037 0.00 0.00 35.43 1.40
3237 4851 8.697960 GTTACCGAGAAATACCGAGAATATTTC 58.302 37.037 8.71 8.71 44.27 2.17
3238 4852 6.812998 ACCGAGAAATACCGAGAATATTTCA 58.187 36.000 15.98 0.00 45.46 2.69
3239 4853 7.270047 ACCGAGAAATACCGAGAATATTTCAA 58.730 34.615 15.98 0.00 45.46 2.69
3240 4854 7.438459 ACCGAGAAATACCGAGAATATTTCAAG 59.562 37.037 15.98 10.54 45.46 3.02
3241 4855 7.284351 CGAGAAATACCGAGAATATTTCAAGC 58.716 38.462 15.98 7.25 45.46 4.01
3244 4858 7.494625 AGAAATACCGAGAATATTTCAAGCGAA 59.505 33.333 15.98 0.00 45.46 4.70
3285 4940 9.958234 TTTGAATTCAAATAAGTGAATGAACGA 57.042 25.926 26.01 1.80 45.42 3.85
3286 4941 9.958234 TTGAATTCAAATAAGTGAATGAACGAA 57.042 25.926 18.45 0.00 45.42 3.85
3306 5306 5.523438 GAATATTCGAACCAGAGACCTCT 57.477 43.478 0.00 0.00 41.37 3.69
3307 5307 5.523438 AATATTCGAACCAGAGACCTCTC 57.477 43.478 0.00 0.00 43.17 3.20
3308 5308 2.287977 TTCGAACCAGAGACCTCTCA 57.712 50.000 5.13 0.00 45.21 3.27
3309 5309 2.287977 TCGAACCAGAGACCTCTCAA 57.712 50.000 5.13 0.00 45.21 3.02
3310 5310 2.594131 TCGAACCAGAGACCTCTCAAA 58.406 47.619 5.13 0.00 45.21 2.69
3312 5312 3.578716 TCGAACCAGAGACCTCTCAAAAT 59.421 43.478 5.13 0.00 45.21 1.82
3313 5313 4.770531 TCGAACCAGAGACCTCTCAAAATA 59.229 41.667 5.13 0.00 45.21 1.40
3314 5314 5.105716 TCGAACCAGAGACCTCTCAAAATAG 60.106 44.000 5.13 0.00 45.21 1.73
3317 5317 5.094387 ACCAGAGACCTCTCAAAATAGGAA 58.906 41.667 5.13 0.00 45.21 3.36
3318 5318 5.046231 ACCAGAGACCTCTCAAAATAGGAAC 60.046 44.000 5.13 0.00 45.21 3.62
3319 5319 5.188751 CCAGAGACCTCTCAAAATAGGAACT 59.811 44.000 5.13 0.00 45.21 3.01
3320 5320 6.381420 CCAGAGACCTCTCAAAATAGGAACTA 59.619 42.308 5.13 0.00 45.18 2.24
3321 5321 7.417342 CCAGAGACCTCTCAAAATAGGAACTAG 60.417 44.444 5.13 0.00 44.66 2.57
3322 5322 6.609616 AGAGACCTCTCAAAATAGGAACTAGG 59.390 42.308 5.13 0.00 44.66 3.02
3323 5323 6.381707 GAGACCTCTCAAAATAGGAACTAGGT 59.618 42.308 0.00 0.00 42.96 3.08
3338 5338 8.767776 AGGAACTAGGTTGATACCAACATGCC 62.768 46.154 1.54 0.00 46.27 4.40
3344 5344 2.722094 TGATACCAACATGCCAGAACC 58.278 47.619 0.00 0.00 0.00 3.62
3345 5345 2.040947 TGATACCAACATGCCAGAACCA 59.959 45.455 0.00 0.00 0.00 3.67
3347 5347 1.039856 ACCAACATGCCAGAACCAAC 58.960 50.000 0.00 0.00 0.00 3.77
3348 5348 1.331214 CCAACATGCCAGAACCAACT 58.669 50.000 0.00 0.00 0.00 3.16
3349 5349 1.270550 CCAACATGCCAGAACCAACTC 59.729 52.381 0.00 0.00 0.00 3.01
3353 5353 2.040813 ACATGCCAGAACCAACTCTCAT 59.959 45.455 0.00 0.00 0.00 2.90
3354 5354 2.189594 TGCCAGAACCAACTCTCATG 57.810 50.000 0.00 0.00 0.00 3.07
3356 5356 1.952367 GCCAGAACCAACTCTCATGGG 60.952 57.143 0.00 0.00 42.48 4.00
3357 5357 1.630369 CCAGAACCAACTCTCATGGGA 59.370 52.381 0.00 0.00 42.48 4.37
3358 5358 2.240667 CCAGAACCAACTCTCATGGGAT 59.759 50.000 0.00 0.00 42.48 3.85
3359 5359 3.308688 CCAGAACCAACTCTCATGGGATT 60.309 47.826 0.00 0.00 42.48 3.01
3360 5360 4.080356 CCAGAACCAACTCTCATGGGATTA 60.080 45.833 0.00 0.00 42.48 1.75
3361 5361 5.500234 CAGAACCAACTCTCATGGGATTAA 58.500 41.667 0.00 0.00 42.48 1.40
3362 5362 6.125029 CAGAACCAACTCTCATGGGATTAAT 58.875 40.000 0.00 0.00 42.48 1.40
3363 5363 6.604795 CAGAACCAACTCTCATGGGATTAATT 59.395 38.462 0.00 0.00 42.48 1.40
3364 5364 7.775093 CAGAACCAACTCTCATGGGATTAATTA 59.225 37.037 0.00 0.00 42.48 1.40
3365 5365 7.995488 AGAACCAACTCTCATGGGATTAATTAG 59.005 37.037 0.00 0.00 42.48 1.73
3366 5366 7.451731 ACCAACTCTCATGGGATTAATTAGA 57.548 36.000 0.00 0.00 42.48 2.10
3367 5367 8.050316 ACCAACTCTCATGGGATTAATTAGAT 57.950 34.615 0.00 0.00 42.48 1.98
3368 5368 8.160106 ACCAACTCTCATGGGATTAATTAGATC 58.840 37.037 0.00 0.00 42.48 2.75
3369 5369 7.609532 CCAACTCTCATGGGATTAATTAGATCC 59.390 40.741 0.00 13.86 41.93 3.36
3370 5370 8.381636 CAACTCTCATGGGATTAATTAGATCCT 58.618 37.037 18.28 5.36 42.23 3.24
3371 5371 9.621239 AACTCTCATGGGATTAATTAGATCCTA 57.379 33.333 18.28 15.27 42.23 2.94
3372 5372 9.041354 ACTCTCATGGGATTAATTAGATCCTAC 57.959 37.037 18.28 9.36 42.23 3.18
3373 5373 8.067751 TCTCATGGGATTAATTAGATCCTACG 57.932 38.462 18.28 10.68 42.23 3.51
3374 5374 7.674348 TCTCATGGGATTAATTAGATCCTACGT 59.326 37.037 18.28 0.00 42.23 3.57
3375 5375 8.888836 TCATGGGATTAATTAGATCCTACGTA 57.111 34.615 18.28 0.00 42.23 3.57
3376 5376 8.746530 TCATGGGATTAATTAGATCCTACGTAC 58.253 37.037 18.28 8.02 42.23 3.67
3377 5377 8.750298 CATGGGATTAATTAGATCCTACGTACT 58.250 37.037 18.28 0.00 42.23 2.73
3378 5378 8.716674 TGGGATTAATTAGATCCTACGTACTT 57.283 34.615 18.28 0.00 42.23 2.24
3379 5379 9.151177 TGGGATTAATTAGATCCTACGTACTTT 57.849 33.333 18.28 0.00 42.23 2.66
3390 5390 8.341173 AGATCCTACGTACTTTACTGTAAATCG 58.659 37.037 12.95 17.44 0.00 3.34
3391 5391 7.609760 TCCTACGTACTTTACTGTAAATCGA 57.390 36.000 24.48 10.26 0.00 3.59
3392 5392 7.688372 TCCTACGTACTTTACTGTAAATCGAG 58.312 38.462 24.48 19.15 0.00 4.04
3393 5393 7.334421 TCCTACGTACTTTACTGTAAATCGAGT 59.666 37.037 24.48 17.31 0.00 4.18
3394 5394 7.427606 CCTACGTACTTTACTGTAAATCGAGTG 59.572 40.741 24.48 12.98 0.00 3.51
3395 5395 6.672147 ACGTACTTTACTGTAAATCGAGTGT 58.328 36.000 24.48 16.45 0.00 3.55
3396 5396 7.141363 ACGTACTTTACTGTAAATCGAGTGTT 58.859 34.615 24.48 10.43 0.00 3.32
3397 5397 7.649306 ACGTACTTTACTGTAAATCGAGTGTTT 59.351 33.333 24.48 9.99 0.00 2.83
3398 5398 9.117145 CGTACTTTACTGTAAATCGAGTGTTTA 57.883 33.333 12.95 0.00 0.00 2.01
3405 5405 8.385898 ACTGTAAATCGAGTGTTTAAATTCCA 57.614 30.769 0.00 0.00 0.00 3.53
3406 5406 8.842280 ACTGTAAATCGAGTGTTTAAATTCCAA 58.158 29.630 0.00 0.00 0.00 3.53
3407 5407 9.672086 CTGTAAATCGAGTGTTTAAATTCCAAA 57.328 29.630 0.00 0.00 0.00 3.28
3413 5413 9.757227 ATCGAGTGTTTAAATTCCAAAATTTCA 57.243 25.926 0.00 0.00 42.66 2.69
3414 5414 9.587772 TCGAGTGTTTAAATTCCAAAATTTCAA 57.412 25.926 0.00 0.00 42.66 2.69
3444 5444 3.234979 TTTTTGCTCGGTATGGCGA 57.765 47.368 0.00 0.00 0.00 5.54
3445 5445 1.745232 TTTTTGCTCGGTATGGCGAT 58.255 45.000 0.00 0.00 0.00 4.58
3446 5446 1.745232 TTTTGCTCGGTATGGCGATT 58.255 45.000 0.00 0.00 0.00 3.34
3447 5447 1.745232 TTTGCTCGGTATGGCGATTT 58.255 45.000 0.00 0.00 0.00 2.17
3448 5448 2.605837 TTGCTCGGTATGGCGATTTA 57.394 45.000 0.00 0.00 0.00 1.40
3449 5449 1.860676 TGCTCGGTATGGCGATTTAC 58.139 50.000 0.00 0.00 0.00 2.01
3450 5450 1.145803 GCTCGGTATGGCGATTTACC 58.854 55.000 0.00 0.00 35.52 2.85
3454 5454 1.792006 GGTATGGCGATTTACCGAGG 58.208 55.000 0.00 0.00 0.00 4.63
3455 5455 1.607251 GGTATGGCGATTTACCGAGGG 60.607 57.143 0.00 0.00 0.00 4.30
3456 5456 0.682852 TATGGCGATTTACCGAGGGG 59.317 55.000 0.00 0.00 40.11 4.79
3468 5468 3.557207 CGAGGGGTACGGAAATACG 57.443 57.895 0.00 0.00 40.31 3.06
3478 5478 3.615224 ACGGAAATACGTGGTAACCAT 57.385 42.857 0.00 0.00 46.64 3.55
3479 5479 3.264104 ACGGAAATACGTGGTAACCATG 58.736 45.455 0.00 0.00 46.64 3.66
3480 5480 2.610374 CGGAAATACGTGGTAACCATGG 59.390 50.000 11.19 11.19 44.23 3.66
3481 5481 2.946990 GGAAATACGTGGTAACCATGGG 59.053 50.000 18.09 0.00 44.23 4.00
3482 5482 3.370739 GGAAATACGTGGTAACCATGGGA 60.371 47.826 18.09 0.00 44.23 4.37
3483 5483 4.263435 GAAATACGTGGTAACCATGGGAA 58.737 43.478 18.09 0.00 44.23 3.97
3484 5484 4.304048 AATACGTGGTAACCATGGGAAA 57.696 40.909 18.09 0.00 44.23 3.13
3485 5485 2.891191 ACGTGGTAACCATGGGAAAT 57.109 45.000 18.09 1.59 44.23 2.17
3486 5486 2.718563 ACGTGGTAACCATGGGAAATC 58.281 47.619 18.09 1.35 44.23 2.17
3487 5487 2.307686 ACGTGGTAACCATGGGAAATCT 59.692 45.455 18.09 0.00 44.23 2.40
3488 5488 3.245122 ACGTGGTAACCATGGGAAATCTT 60.245 43.478 18.09 2.18 44.23 2.40
3489 5489 3.128589 CGTGGTAACCATGGGAAATCTTG 59.871 47.826 18.09 0.00 36.92 3.02
3490 5490 4.340617 GTGGTAACCATGGGAAATCTTGA 58.659 43.478 18.09 0.00 35.28 3.02
3491 5491 4.770010 GTGGTAACCATGGGAAATCTTGAA 59.230 41.667 18.09 0.00 35.28 2.69
3492 5492 5.245075 GTGGTAACCATGGGAAATCTTGAAA 59.755 40.000 18.09 0.00 35.28 2.69
3493 5493 6.022315 TGGTAACCATGGGAAATCTTGAAAT 58.978 36.000 18.09 0.00 0.00 2.17
3494 5494 6.500049 TGGTAACCATGGGAAATCTTGAAATT 59.500 34.615 18.09 0.00 0.00 1.82
3495 5495 7.017056 TGGTAACCATGGGAAATCTTGAAATTT 59.983 33.333 18.09 0.00 0.00 1.82
3496 5496 7.549134 GGTAACCATGGGAAATCTTGAAATTTC 59.451 37.037 18.09 11.41 42.41 2.17
3497 5497 5.723295 ACCATGGGAAATCTTGAAATTTCG 58.277 37.500 18.09 0.46 43.52 3.46
3498 5498 5.480073 ACCATGGGAAATCTTGAAATTTCGA 59.520 36.000 18.09 10.62 43.52 3.71
3499 5499 5.807011 CCATGGGAAATCTTGAAATTTCGAC 59.193 40.000 13.34 0.00 43.52 4.20
3500 5500 5.385509 TGGGAAATCTTGAAATTTCGACC 57.614 39.130 13.34 8.29 43.52 4.79
3501 5501 4.083003 TGGGAAATCTTGAAATTTCGACCG 60.083 41.667 13.34 1.46 43.52 4.79
3502 5502 4.412207 GGAAATCTTGAAATTTCGACCGG 58.588 43.478 13.34 0.00 43.52 5.28
3503 5503 4.082949 GGAAATCTTGAAATTTCGACCGGT 60.083 41.667 6.92 6.92 43.52 5.28
3504 5504 5.122711 GGAAATCTTGAAATTTCGACCGGTA 59.877 40.000 7.34 0.00 43.52 4.02
3505 5505 6.348704 GGAAATCTTGAAATTTCGACCGGTAA 60.349 38.462 7.34 0.00 43.52 2.85
3506 5506 4.996062 TCTTGAAATTTCGACCGGTAAC 57.004 40.909 7.34 0.00 0.00 2.50
3507 5507 3.747529 TCTTGAAATTTCGACCGGTAACC 59.252 43.478 7.34 0.00 0.00 2.85
3508 5508 3.123157 TGAAATTTCGACCGGTAACCA 57.877 42.857 7.34 0.00 0.00 3.67
3509 5509 3.474600 TGAAATTTCGACCGGTAACCAA 58.525 40.909 7.34 0.00 0.00 3.67
3510 5510 3.881688 TGAAATTTCGACCGGTAACCAAA 59.118 39.130 7.34 4.53 0.00 3.28
3511 5511 4.337555 TGAAATTTCGACCGGTAACCAAAA 59.662 37.500 7.34 4.39 0.00 2.44
3512 5512 3.902261 ATTTCGACCGGTAACCAAAAC 57.098 42.857 7.34 0.00 0.00 2.43
3513 5513 1.592064 TTCGACCGGTAACCAAAACC 58.408 50.000 7.34 0.00 0.00 3.27
3514 5514 0.758123 TCGACCGGTAACCAAAACCT 59.242 50.000 7.34 0.00 34.66 3.50
3515 5515 1.140652 TCGACCGGTAACCAAAACCTT 59.859 47.619 7.34 0.00 34.66 3.50
3516 5516 1.264826 CGACCGGTAACCAAAACCTTG 59.735 52.381 7.34 0.00 34.66 3.61
3777 5791 9.953565 AACTACTCCTACAACAATAAGCATTAA 57.046 29.630 0.00 0.00 32.17 1.40
3907 5922 6.790285 TGGACGTGGTAATTAAGTTTTCTC 57.210 37.500 0.00 0.00 0.00 2.87
3909 5924 6.938030 TGGACGTGGTAATTAAGTTTTCTCAT 59.062 34.615 0.00 0.00 0.00 2.90
3910 5925 7.094975 TGGACGTGGTAATTAAGTTTTCTCATG 60.095 37.037 0.00 0.00 0.00 3.07
3911 5926 7.118680 GGACGTGGTAATTAAGTTTTCTCATGA 59.881 37.037 0.00 0.00 0.00 3.07
3912 5927 7.803724 ACGTGGTAATTAAGTTTTCTCATGAC 58.196 34.615 0.00 0.00 0.00 3.06
3913 5928 7.442969 ACGTGGTAATTAAGTTTTCTCATGACA 59.557 33.333 0.00 0.00 0.00 3.58
3914 5929 8.286800 CGTGGTAATTAAGTTTTCTCATGACAA 58.713 33.333 0.00 0.00 0.00 3.18
3952 5967 9.188588 GAAAAGTGCTTATTACAAAGTTAACCC 57.811 33.333 0.88 0.00 0.00 4.11
3955 5970 5.412286 GTGCTTATTACAAAGTTAACCCGGA 59.588 40.000 0.73 0.00 0.00 5.14
3959 5974 7.010830 GCTTATTACAAAGTTAACCCGGAGTAG 59.989 40.741 0.73 0.00 0.00 2.57
3960 5975 3.049708 ACAAAGTTAACCCGGAGTAGC 57.950 47.619 0.73 0.00 0.00 3.58
3961 5976 2.369532 ACAAAGTTAACCCGGAGTAGCA 59.630 45.455 0.73 0.00 0.00 3.49
3971 5993 3.139025 ACCCGGAGTAGCATACCTAGTAA 59.861 47.826 0.73 0.00 44.47 2.24
3988 6010 6.769341 ACCTAGTAAGTTACCCAACTGTTTTG 59.231 38.462 9.46 0.00 44.41 2.44
4149 6196 2.734492 GCACCGCTACTTCTACGACAAT 60.734 50.000 0.00 0.00 0.00 2.71
4296 6343 1.846007 TAGCCCGCCATTTCAACATT 58.154 45.000 0.00 0.00 0.00 2.71
4297 6344 0.247185 AGCCCGCCATTTCAACATTG 59.753 50.000 0.00 0.00 0.00 2.82
4298 6345 0.740516 GCCCGCCATTTCAACATTGG 60.741 55.000 0.00 0.00 0.00 3.16
4299 6346 0.894141 CCCGCCATTTCAACATTGGA 59.106 50.000 0.00 0.00 31.94 3.53
4300 6347 1.481772 CCCGCCATTTCAACATTGGAT 59.518 47.619 0.00 0.00 31.94 3.41
4301 6348 2.542597 CCGCCATTTCAACATTGGATG 58.457 47.619 0.00 0.00 31.94 3.51
4302 6349 2.542597 CGCCATTTCAACATTGGATGG 58.457 47.619 16.94 16.94 41.25 3.51
4303 6350 2.739287 CGCCATTTCAACATTGGATGGG 60.739 50.000 20.11 7.59 39.98 4.00
4304 6351 2.500910 GCCATTTCAACATTGGATGGGA 59.499 45.455 20.11 0.00 39.98 4.37
4305 6352 3.055240 GCCATTTCAACATTGGATGGGAA 60.055 43.478 20.11 0.20 39.98 3.97
4306 6353 4.384427 GCCATTTCAACATTGGATGGGAAT 60.384 41.667 20.11 2.49 39.98 3.01
4307 6354 5.120399 CCATTTCAACATTGGATGGGAATG 58.880 41.667 14.91 0.00 37.99 2.67
4308 6355 4.822685 TTTCAACATTGGATGGGAATGG 57.177 40.909 0.00 0.00 35.48 3.16
4309 6356 2.749600 TCAACATTGGATGGGAATGGG 58.250 47.619 0.00 0.00 35.48 4.00
4310 6357 2.314247 TCAACATTGGATGGGAATGGGA 59.686 45.455 0.00 0.00 35.48 4.37
4311 6358 2.431782 CAACATTGGATGGGAATGGGAC 59.568 50.000 0.00 0.00 35.48 4.46
4312 6359 1.932338 ACATTGGATGGGAATGGGACT 59.068 47.619 0.00 0.00 35.48 3.85
4313 6360 2.091665 ACATTGGATGGGAATGGGACTC 60.092 50.000 0.00 0.00 35.48 3.36
4314 6361 1.679981 TTGGATGGGAATGGGACTCA 58.320 50.000 0.00 0.00 0.00 3.41
4315 6362 1.911454 TGGATGGGAATGGGACTCAT 58.089 50.000 0.00 0.00 37.79 2.90
4316 6363 7.366337 ACATTGGATGGGAATGGGACTCATT 62.366 44.000 0.00 0.00 40.66 2.57
4338 6385 3.053019 TGGAGTGAGATGAGGATGAGACT 60.053 47.826 0.00 0.00 0.00 3.24
4502 6549 1.541588 CCCTACAGCTTGTTCAAAGGC 59.458 52.381 0.00 0.00 0.00 4.35
4513 6565 1.723003 GTTCAAAGGCTGGTACGTACG 59.277 52.381 18.98 15.01 0.00 3.67
4552 6604 8.489559 TGTAGTAACATTTTTACAGTGCGTAAG 58.510 33.333 0.00 0.00 41.10 2.34
4554 6606 8.319143 AGTAACATTTTTACAGTGCGTAAGAT 57.681 30.769 0.00 0.00 41.10 2.40
4555 6607 9.426837 AGTAACATTTTTACAGTGCGTAAGATA 57.573 29.630 0.00 0.00 41.10 1.98
4558 6683 7.241376 ACATTTTTACAGTGCGTAAGATAAGC 58.759 34.615 0.00 0.00 41.10 3.09
4649 6775 0.729690 GGCGATGAAGAAGGAGCAAC 59.270 55.000 0.00 0.00 0.00 4.17
4659 6785 3.960571 AGAAGGAGCAACATAGCAACAT 58.039 40.909 0.00 0.00 36.85 2.71
4766 6892 5.474825 TCAAGTACATGCGTGATTGAGTTA 58.525 37.500 14.17 0.00 0.00 2.24
4767 6893 5.347635 TCAAGTACATGCGTGATTGAGTTAC 59.652 40.000 14.17 2.72 0.00 2.50
4768 6894 4.816392 AGTACATGCGTGATTGAGTTACA 58.184 39.130 14.17 0.00 0.00 2.41
4769 6895 5.234752 AGTACATGCGTGATTGAGTTACAA 58.765 37.500 14.17 0.00 42.95 2.41
4770 6896 4.668576 ACATGCGTGATTGAGTTACAAG 57.331 40.909 14.17 0.00 42.02 3.16
4797 6948 6.817765 TTAACTAGTCAAATTTCCAGCCAG 57.182 37.500 0.00 0.00 0.00 4.85
4798 6949 4.373156 ACTAGTCAAATTTCCAGCCAGT 57.627 40.909 0.00 0.00 0.00 4.00
4800 6951 4.520492 ACTAGTCAAATTTCCAGCCAGTTG 59.480 41.667 0.00 0.00 0.00 3.16
4801 6952 2.036346 AGTCAAATTTCCAGCCAGTTGC 59.964 45.455 0.00 0.00 41.71 4.17
4813 6968 1.266989 GCCAGTTGCTACCACTGAAAC 59.733 52.381 1.54 0.00 36.87 2.78
4821 6976 4.127171 TGCTACCACTGAAACTTGAGAAC 58.873 43.478 0.00 0.00 0.00 3.01
4862 7017 8.700722 TTTGGGAATGATTTAAACATTGATCG 57.299 30.769 15.92 0.00 37.96 3.69
4874 7029 0.473755 ATTGATCGCCATGCCTACCA 59.526 50.000 0.00 0.00 0.00 3.25
4875 7030 0.463654 TTGATCGCCATGCCTACCAC 60.464 55.000 0.00 0.00 0.00 4.16
4905 7060 4.701956 AATTGTCTCCCTTTGTTATGCG 57.298 40.909 0.00 0.00 0.00 4.73
4912 7067 1.818674 CCCTTTGTTATGCGGCTCTTT 59.181 47.619 0.00 0.00 0.00 2.52
4915 7070 3.920412 CCTTTGTTATGCGGCTCTTTTTC 59.080 43.478 0.00 0.00 0.00 2.29
4916 7071 4.321230 CCTTTGTTATGCGGCTCTTTTTCT 60.321 41.667 0.00 0.00 0.00 2.52
4918 7073 4.419522 TGTTATGCGGCTCTTTTTCTTC 57.580 40.909 0.00 0.00 0.00 2.87
4925 7084 1.271434 GGCTCTTTTTCTTCTCCGGGT 60.271 52.381 0.00 0.00 0.00 5.28
4937 7096 5.502079 TCTTCTCCGGGTTTTATTATGCAA 58.498 37.500 0.00 0.00 0.00 4.08
4947 7106 8.402472 CGGGTTTTATTATGCAACTCTAATGAA 58.598 33.333 0.00 0.00 0.00 2.57
4986 7145 2.829720 ACTAGTTATGCAACTCCCACGA 59.170 45.455 0.00 0.00 44.04 4.35
4990 7149 0.908910 TATGCAACTCCCACGACCAT 59.091 50.000 0.00 0.00 0.00 3.55
5001 7160 4.699637 TCCCACGACCATGAATGTATTAC 58.300 43.478 0.00 0.00 0.00 1.89
5005 7164 6.039270 CCCACGACCATGAATGTATTACAAAT 59.961 38.462 0.00 0.00 0.00 2.32
5006 7165 6.912051 CCACGACCATGAATGTATTACAAATG 59.088 38.462 0.00 5.75 0.00 2.32
5007 7166 7.415095 CCACGACCATGAATGTATTACAAATGT 60.415 37.037 0.00 0.00 0.00 2.71
5009 7168 7.967854 ACGACCATGAATGTATTACAAATGTTG 59.032 33.333 0.00 0.77 0.00 3.33
5052 7212 2.040947 TGAAACCCATGACCACTGCATA 59.959 45.455 0.00 0.00 0.00 3.14
5083 7245 6.697395 TGCACATATACATCCTTATTAGCGT 58.303 36.000 0.00 0.00 0.00 5.07
5084 7246 7.158697 TGCACATATACATCCTTATTAGCGTT 58.841 34.615 0.00 0.00 0.00 4.84
5107 7269 1.401539 GCAACCAACATCCGAAGAAGC 60.402 52.381 0.00 0.00 0.00 3.86
5144 7306 5.878406 ATAAAACCAATCACAACCAACCA 57.122 34.783 0.00 0.00 0.00 3.67
5150 7312 4.233789 CCAATCACAACCAACCAATAACG 58.766 43.478 0.00 0.00 0.00 3.18
5162 7324 4.146745 ACCAATAACGGGATTACACTCC 57.853 45.455 0.00 0.00 34.31 3.85
5188 7350 5.552870 ACATAATCTCTTATTGGACCGCT 57.447 39.130 0.00 0.00 0.00 5.52
5211 7373 0.461163 CATTGTATCCCGTGCGACCA 60.461 55.000 0.00 0.00 0.00 4.02
5407 8307 3.058914 GCTCACAATAAGACACACGCTTT 60.059 43.478 0.00 0.00 0.00 3.51
5427 8327 3.341629 CATGGACCCCCACCAGCT 61.342 66.667 0.00 0.00 46.98 4.24
5434 8334 3.090532 CCCCACCAGCTAGTCCCC 61.091 72.222 0.00 0.00 0.00 4.81
5474 8374 3.452264 TGGTAGGTGGAGACAGATGAATG 59.548 47.826 0.00 0.00 44.46 2.67
5522 8422 4.158949 AGAGCAGCAAACATGCATGAAATA 59.841 37.500 32.75 0.00 46.31 1.40
5523 8423 4.823157 AGCAGCAAACATGCATGAAATAA 58.177 34.783 32.75 0.00 46.31 1.40
5561 8461 3.020984 GGTTCCTCCTGTTCACAAAACA 58.979 45.455 0.00 0.00 0.00 2.83
5563 8463 4.099419 GGTTCCTCCTGTTCACAAAACAAT 59.901 41.667 0.00 0.00 0.00 2.71
5583 8483 1.986882 ATTTTCCGCATCCCTCCATC 58.013 50.000 0.00 0.00 0.00 3.51
5584 8484 0.106719 TTTTCCGCATCCCTCCATCC 60.107 55.000 0.00 0.00 0.00 3.51
5588 8488 2.796193 CGCATCCCTCCATCCACGA 61.796 63.158 0.00 0.00 0.00 4.35
5591 8491 1.888215 CATCCCTCCATCCACGATTG 58.112 55.000 0.00 0.00 0.00 2.67
5618 8518 8.072567 GTCAAAATAGCACCATGATTGAGATAC 58.927 37.037 0.00 0.00 0.00 2.24
5681 8581 6.982852 TCGAAAGAGACTTCATACTGAAAGT 58.017 36.000 0.00 0.00 43.65 2.66
5696 8596 5.593183 CTGAAAGTTACTTCCTCCGTTTC 57.407 43.478 0.00 0.00 0.00 2.78
5697 8597 5.026038 TGAAAGTTACTTCCTCCGTTTCA 57.974 39.130 0.00 0.00 31.71 2.69
5698 8598 5.430007 TGAAAGTTACTTCCTCCGTTTCAA 58.570 37.500 0.00 0.00 31.35 2.69
5699 8599 5.881443 TGAAAGTTACTTCCTCCGTTTCAAA 59.119 36.000 0.00 0.00 31.35 2.69
5700 8600 6.374894 TGAAAGTTACTTCCTCCGTTTCAAAA 59.625 34.615 0.00 0.00 31.35 2.44
5701 8601 6.954487 AAGTTACTTCCTCCGTTTCAAAAT 57.046 33.333 0.00 0.00 0.00 1.82
5702 8602 8.454570 AAAGTTACTTCCTCCGTTTCAAAATA 57.545 30.769 0.00 0.00 0.00 1.40
5703 8603 7.668525 AGTTACTTCCTCCGTTTCAAAATAG 57.331 36.000 0.00 0.00 0.00 1.73
5704 8604 7.447594 AGTTACTTCCTCCGTTTCAAAATAGA 58.552 34.615 0.00 0.00 0.00 1.98
5705 8605 8.101419 AGTTACTTCCTCCGTTTCAAAATAGAT 58.899 33.333 0.00 0.00 0.00 1.98
5706 8606 6.743575 ACTTCCTCCGTTTCAAAATAGATG 57.256 37.500 0.00 0.00 0.00 2.90
5707 8607 6.472887 ACTTCCTCCGTTTCAAAATAGATGA 58.527 36.000 0.00 0.00 0.00 2.92
5708 8608 6.940298 ACTTCCTCCGTTTCAAAATAGATGAA 59.060 34.615 0.00 0.00 35.11 2.57
5709 8609 6.737254 TCCTCCGTTTCAAAATAGATGAAC 57.263 37.500 0.00 0.00 36.57 3.18
5710 8610 5.646360 TCCTCCGTTTCAAAATAGATGAACC 59.354 40.000 0.00 0.00 36.57 3.62
5711 8611 5.414454 CCTCCGTTTCAAAATAGATGAACCA 59.586 40.000 0.00 0.00 36.57 3.67
5712 8612 6.072175 CCTCCGTTTCAAAATAGATGAACCAA 60.072 38.462 0.00 0.00 36.57 3.67
5713 8613 6.674066 TCCGTTTCAAAATAGATGAACCAAC 58.326 36.000 0.00 0.00 36.57 3.77
5714 8614 6.488683 TCCGTTTCAAAATAGATGAACCAACT 59.511 34.615 0.00 0.00 36.57 3.16
5715 8615 7.013846 TCCGTTTCAAAATAGATGAACCAACTT 59.986 33.333 0.00 0.00 36.57 2.66
5716 8616 7.651704 CCGTTTCAAAATAGATGAACCAACTTT 59.348 33.333 0.00 0.00 36.57 2.66
5717 8617 9.672086 CGTTTCAAAATAGATGAACCAACTTTA 57.328 29.630 0.00 0.00 36.57 1.85
5738 8638 9.762381 ACTTTATACTAATTTTGGAATGACCCA 57.238 29.630 0.00 0.00 38.00 4.51
5741 8641 9.762381 TTATACTAATTTTGGAATGACCCAACT 57.238 29.630 0.00 0.00 45.13 3.16
5742 8642 6.994421 ACTAATTTTGGAATGACCCAACTT 57.006 33.333 0.00 0.00 45.13 2.66
5743 8643 7.373617 ACTAATTTTGGAATGACCCAACTTT 57.626 32.000 0.00 0.00 45.13 2.66
5744 8644 7.216494 ACTAATTTTGGAATGACCCAACTTTG 58.784 34.615 0.00 0.00 45.13 2.77
5745 8645 5.628797 ATTTTGGAATGACCCAACTTTGT 57.371 34.783 0.00 0.00 45.13 2.83
5746 8646 6.739331 ATTTTGGAATGACCCAACTTTGTA 57.261 33.333 0.00 0.00 45.13 2.41
5747 8647 5.523438 TTTGGAATGACCCAACTTTGTAC 57.477 39.130 0.00 0.00 45.13 2.90
5748 8648 3.142951 TGGAATGACCCAACTTTGTACG 58.857 45.455 0.00 0.00 38.00 3.67
5749 8649 3.181453 TGGAATGACCCAACTTTGTACGA 60.181 43.478 0.00 0.00 38.00 3.43
5750 8650 3.816523 GGAATGACCCAACTTTGTACGAA 59.183 43.478 0.00 0.00 0.00 3.85
5751 8651 4.276431 GGAATGACCCAACTTTGTACGAAA 59.724 41.667 0.00 0.00 0.00 3.46
5752 8652 5.432885 AATGACCCAACTTTGTACGAAAG 57.567 39.130 13.08 13.08 0.00 2.62
5755 8655 5.426504 TGACCCAACTTTGTACGAAAGTTA 58.573 37.500 23.56 13.01 45.57 2.24
5756 8656 5.524646 TGACCCAACTTTGTACGAAAGTTAG 59.475 40.000 23.56 20.79 45.57 2.34
5757 8657 5.430886 ACCCAACTTTGTACGAAAGTTAGT 58.569 37.500 23.56 21.18 45.57 2.24
5758 8658 6.581712 ACCCAACTTTGTACGAAAGTTAGTA 58.418 36.000 23.56 0.00 45.57 1.82
5759 8659 6.479990 ACCCAACTTTGTACGAAAGTTAGTAC 59.520 38.462 23.56 12.19 45.57 2.73
5760 8660 6.479660 CCCAACTTTGTACGAAAGTTAGTACA 59.520 38.462 23.56 15.91 45.57 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 2.223745 GTTGAAAAAGGTAGCCCACGA 58.776 47.619 0.00 0.00 0.00 4.35
14 15 3.826729 AGGATGGTGTTGAAAAAGGTAGC 59.173 43.478 0.00 0.00 0.00 3.58
18 19 5.304357 AGGTTAAGGATGGTGTTGAAAAAGG 59.696 40.000 0.00 0.00 0.00 3.11
23 24 5.836024 ACTAGGTTAAGGATGGTGTTGAA 57.164 39.130 0.00 0.00 0.00 2.69
27 28 6.449830 AGAAAACTAGGTTAAGGATGGTGT 57.550 37.500 0.00 0.00 0.00 4.16
44 45 8.755941 GGCAAAATGAGACTTTTTCTAGAAAAC 58.244 33.333 26.47 16.83 39.70 2.43
47 48 6.549364 TGGGCAAAATGAGACTTTTTCTAGAA 59.451 34.615 0.00 0.00 33.22 2.10
48 49 6.068010 TGGGCAAAATGAGACTTTTTCTAGA 58.932 36.000 0.00 0.00 33.22 2.43
49 50 6.331369 TGGGCAAAATGAGACTTTTTCTAG 57.669 37.500 0.00 0.00 33.22 2.43
50 51 6.723298 TTGGGCAAAATGAGACTTTTTCTA 57.277 33.333 0.00 0.00 33.22 2.10
52 53 6.018751 GTCTTTGGGCAAAATGAGACTTTTTC 60.019 38.462 0.00 0.00 0.00 2.29
57 58 3.565307 TGTCTTTGGGCAAAATGAGACT 58.435 40.909 6.52 0.00 0.00 3.24
59 60 4.214310 TCTTGTCTTTGGGCAAAATGAGA 58.786 39.130 0.00 0.00 0.00 3.27
64 65 2.499289 TGCTTCTTGTCTTTGGGCAAAA 59.501 40.909 0.00 0.00 0.00 2.44
77 78 6.709397 TGGATATCATTTCTAGCTGCTTCTTG 59.291 38.462 7.79 0.00 0.00 3.02
94 95 5.476983 ACTCCAAATACCCTCTGGATATCA 58.523 41.667 4.83 0.00 38.55 2.15
98 99 4.164988 CAGAACTCCAAATACCCTCTGGAT 59.835 45.833 0.00 0.00 38.55 3.41
101 102 3.274288 GCAGAACTCCAAATACCCTCTG 58.726 50.000 0.00 0.00 33.54 3.35
108 109 2.354704 CGGACCTGCAGAACTCCAAATA 60.355 50.000 17.39 0.00 0.00 1.40
121 122 1.139163 CAATTGCAAAACGGACCTGC 58.861 50.000 1.71 0.00 36.60 4.85
122 123 2.507339 ACAATTGCAAAACGGACCTG 57.493 45.000 1.71 0.00 0.00 4.00
123 124 2.542824 CGAACAATTGCAAAACGGACCT 60.543 45.455 1.71 0.00 0.00 3.85
124 125 1.784283 CGAACAATTGCAAAACGGACC 59.216 47.619 1.71 0.00 0.00 4.46
125 126 2.215363 CACGAACAATTGCAAAACGGAC 59.785 45.455 1.71 0.00 0.00 4.79
126 127 2.455032 CACGAACAATTGCAAAACGGA 58.545 42.857 1.71 0.00 0.00 4.69
127 128 1.520590 CCACGAACAATTGCAAAACGG 59.479 47.619 1.71 0.00 0.00 4.44
129 130 2.538037 GGTCCACGAACAATTGCAAAAC 59.462 45.455 1.71 0.00 0.00 2.43
134 138 0.387239 GCAGGTCCACGAACAATTGC 60.387 55.000 5.05 0.00 0.00 3.56
143 147 1.468520 CCATTGTTTAGCAGGTCCACG 59.531 52.381 0.00 0.00 0.00 4.94
186 191 4.942483 TGCATGATCACACAACATGTCATA 59.058 37.500 0.00 0.00 40.64 2.15
213 218 1.068264 GCAGCATCCTCGACGATCATA 60.068 52.381 0.00 0.00 0.00 2.15
223 228 1.520342 GAGACGTGGCAGCATCCTC 60.520 63.158 0.00 0.00 0.00 3.71
225 230 0.249238 CTAGAGACGTGGCAGCATCC 60.249 60.000 0.00 0.00 0.00 3.51
235 252 9.503399 AACCATTTTCTTAAATTCTAGAGACGT 57.497 29.630 0.00 0.00 31.63 4.34
250 267 7.112779 AGTTCGATAGGATCAACCATTTTCTT 58.887 34.615 0.00 0.00 42.04 2.52
255 272 5.104527 TGGAAGTTCGATAGGATCAACCATT 60.105 40.000 0.00 0.00 42.04 3.16
258 275 4.402056 TGGAAGTTCGATAGGATCAACC 57.598 45.455 0.00 0.00 39.35 3.77
260 277 5.183228 GGTTTGGAAGTTCGATAGGATCAA 58.817 41.667 0.00 0.00 0.00 2.57
271 288 3.408634 TCGGATTCTGGTTTGGAAGTTC 58.591 45.455 0.00 0.00 0.00 3.01
280 297 5.160607 TCAAATGTACTCGGATTCTGGTT 57.839 39.130 0.00 0.00 0.00 3.67
283 300 4.034510 GCCTTCAAATGTACTCGGATTCTG 59.965 45.833 0.00 0.00 0.00 3.02
305 322 9.269415 GAATTTGTTGATGCATTTGAATAAAGC 57.731 29.630 0.00 0.01 0.00 3.51
306 323 9.467990 CGAATTTGTTGATGCATTTGAATAAAG 57.532 29.630 0.00 0.00 0.00 1.85
340 357 1.224069 TTCAGCTGCTCGTGAGTTGC 61.224 55.000 9.47 3.82 0.00 4.17
369 386 1.204704 TGACCGTCGAAGATGCTCAAT 59.795 47.619 0.00 0.00 43.31 2.57
370 387 0.601057 TGACCGTCGAAGATGCTCAA 59.399 50.000 0.00 0.00 43.31 3.02
372 389 1.656095 CTTTGACCGTCGAAGATGCTC 59.344 52.381 20.10 0.00 43.31 4.26
373 390 1.673033 CCTTTGACCGTCGAAGATGCT 60.673 52.381 24.71 0.00 43.31 3.79
374 391 0.721718 CCTTTGACCGTCGAAGATGC 59.278 55.000 24.71 0.00 43.31 3.91
375 392 0.721718 GCCTTTGACCGTCGAAGATG 59.278 55.000 24.71 13.11 39.68 2.90
376 393 0.391263 GGCCTTTGACCGTCGAAGAT 60.391 55.000 24.71 0.00 39.68 2.40
377 394 1.005394 GGCCTTTGACCGTCGAAGA 60.005 57.895 24.71 0.00 39.68 2.87
378 395 0.245539 TAGGCCTTTGACCGTCGAAG 59.754 55.000 12.58 18.42 37.57 3.79
379 396 0.899720 ATAGGCCTTTGACCGTCGAA 59.100 50.000 12.58 1.17 0.00 3.71
380 397 0.174845 CATAGGCCTTTGACCGTCGA 59.825 55.000 17.55 0.00 0.00 4.20
381 398 0.108329 ACATAGGCCTTTGACCGTCG 60.108 55.000 27.54 1.73 0.00 5.12
382 399 2.973694 TACATAGGCCTTTGACCGTC 57.026 50.000 27.54 0.00 0.00 4.79
383 400 2.504175 ACATACATAGGCCTTTGACCGT 59.496 45.455 27.54 17.20 0.00 4.83
384 401 2.872245 CACATACATAGGCCTTTGACCG 59.128 50.000 27.54 16.64 0.00 4.79
386 403 2.618709 GCCACATACATAGGCCTTTGAC 59.381 50.000 27.54 6.02 42.58 3.18
387 404 2.930950 GCCACATACATAGGCCTTTGA 58.069 47.619 27.54 12.81 42.58 2.69
404 503 3.616219 AGTCCGCATGTTTAAATAGCCA 58.384 40.909 0.00 0.00 0.00 4.75
413 512 4.647424 TTTTCTGAAAGTCCGCATGTTT 57.353 36.364 2.75 0.00 33.76 2.83
439 538 1.532604 CCGCATACATCCGGCCTCTA 61.533 60.000 0.00 0.00 37.85 2.43
521 620 2.159310 CGCAAATTTCCTCCCGCATTTA 60.159 45.455 0.00 0.00 0.00 1.40
523 622 0.173255 CGCAAATTTCCTCCCGCATT 59.827 50.000 0.00 0.00 0.00 3.56
549 648 6.566079 AGATCAATAAGGACATCTCCAACA 57.434 37.500 0.00 0.00 39.39 3.33
586 685 9.848172 CCAAAAATGTTCAAATAGTTTCTTTCG 57.152 29.630 0.00 0.00 0.00 3.46
668 769 8.210946 TCTCATCCGAAAATGTTCCTATATGTT 58.789 33.333 0.00 0.00 0.00 2.71
670 771 8.607441 TTCTCATCCGAAAATGTTCCTATATG 57.393 34.615 0.00 0.00 0.00 1.78
675 776 6.648879 TTTTTCTCATCCGAAAATGTTCCT 57.351 33.333 0.00 0.00 41.12 3.36
676 777 7.090173 TCATTTTTCTCATCCGAAAATGTTCC 58.910 34.615 15.96 0.00 41.12 3.62
752 853 6.870971 ACGGTTGCTATTTTTACTTCAGAA 57.129 33.333 0.00 0.00 0.00 3.02
946 2461 1.136695 GAGATCTGTGTCTCCTGGCTG 59.863 57.143 0.00 0.00 38.94 4.85
996 2511 0.937304 CCATTTCGCCGATCATCGTT 59.063 50.000 6.25 0.00 38.40 3.85
1011 2526 1.449601 GACCATGTCCGCGTCCATT 60.450 57.895 4.92 0.00 0.00 3.16
1098 2613 1.663643 GAACGATTAGCCGTGCATGAA 59.336 47.619 7.72 0.00 42.54 2.57
1158 2673 3.308053 CAGATCAGAACAACCAGCGTATG 59.692 47.826 0.00 0.00 0.00 2.39
1178 2693 1.079543 CCACGAGAACTGCCCTCAG 60.080 63.158 0.00 0.00 45.71 3.35
1179 2694 1.533033 TCCACGAGAACTGCCCTCA 60.533 57.895 0.00 0.00 0.00 3.86
1299 2814 3.197549 AGAGAGAGAGGCCAGAATGAAAC 59.802 47.826 5.01 0.00 39.69 2.78
1309 2824 3.118956 TCGAAATCAAAGAGAGAGAGGCC 60.119 47.826 0.00 0.00 0.00 5.19
1314 2829 8.417780 ACATGTTATCGAAATCAAAGAGAGAG 57.582 34.615 0.00 0.00 0.00 3.20
1315 2830 8.253810 AGACATGTTATCGAAATCAAAGAGAGA 58.746 33.333 0.00 0.00 0.00 3.10
1317 2832 8.659491 CAAGACATGTTATCGAAATCAAAGAGA 58.341 33.333 0.00 0.00 0.00 3.10
1322 2837 9.214957 ACTTACAAGACATGTTATCGAAATCAA 57.785 29.630 0.00 0.00 43.63 2.57
1324 2839 9.478019 CAACTTACAAGACATGTTATCGAAATC 57.522 33.333 0.00 0.00 43.63 2.17
1325 2840 8.999431 ACAACTTACAAGACATGTTATCGAAAT 58.001 29.630 0.00 0.00 43.63 2.17
1332 2847 7.658575 GGGAGTTACAACTTACAAGACATGTTA 59.341 37.037 0.00 0.00 40.47 2.41
1333 2848 6.485648 GGGAGTTACAACTTACAAGACATGTT 59.514 38.462 0.00 0.00 40.47 2.71
1342 2857 1.002315 GCGGGGGAGTTACAACTTACA 59.998 52.381 0.00 0.00 39.88 2.41
1343 2858 1.730501 GCGGGGGAGTTACAACTTAC 58.269 55.000 0.00 0.00 39.88 2.34
1344 2859 0.247185 CGCGGGGGAGTTACAACTTA 59.753 55.000 0.00 0.00 39.88 2.24
1345 2860 1.004200 CGCGGGGGAGTTACAACTT 60.004 57.895 0.00 0.00 39.88 2.66
1346 2861 2.163601 GACGCGGGGGAGTTACAACT 62.164 60.000 12.47 0.00 43.16 3.16
1347 2862 1.739196 GACGCGGGGGAGTTACAAC 60.739 63.158 12.47 0.00 0.00 3.32
1348 2863 1.909781 AGACGCGGGGGAGTTACAA 60.910 57.895 12.47 0.00 0.00 2.41
1349 2864 2.283388 AGACGCGGGGGAGTTACA 60.283 61.111 12.47 0.00 0.00 2.41
1358 2873 1.663702 ACGAAAGTTCAGACGCGGG 60.664 57.895 12.47 0.00 46.40 6.13
1359 2874 3.932289 ACGAAAGTTCAGACGCGG 58.068 55.556 12.47 0.00 46.40 6.46
1375 2890 3.610677 CCGGAACAAATTAAAATGGCGAC 59.389 43.478 0.00 0.00 0.00 5.19
1386 2901 7.790707 CAAGGATTGTATTGTCCGGAACAAATT 60.791 37.037 20.23 13.54 45.48 1.82
1387 2902 6.350110 CAAGGATTGTATTGTCCGGAACAAAT 60.350 38.462 20.23 15.79 45.48 2.32
1388 2903 5.048364 CAAGGATTGTATTGTCCGGAACAAA 60.048 40.000 20.23 10.18 45.48 2.83
1417 2932 4.000331 TGGCAGAGAGAAGTTCAGAAAG 58.000 45.455 5.50 0.00 0.00 2.62
1435 2950 2.489722 GTTCCCTCTGTTCTTGAATGGC 59.510 50.000 0.00 0.00 0.00 4.40
1460 2975 8.041323 ACGAGTTTTGACATCACCTATATTTCT 58.959 33.333 0.00 0.00 0.00 2.52
1461 2976 8.197988 ACGAGTTTTGACATCACCTATATTTC 57.802 34.615 0.00 0.00 0.00 2.17
1462 2977 9.095065 GTACGAGTTTTGACATCACCTATATTT 57.905 33.333 0.00 0.00 0.00 1.40
1463 2978 8.475639 AGTACGAGTTTTGACATCACCTATATT 58.524 33.333 0.00 0.00 0.00 1.28
1464 2979 7.921214 CAGTACGAGTTTTGACATCACCTATAT 59.079 37.037 0.00 0.00 0.00 0.86
1465 2980 7.255569 CAGTACGAGTTTTGACATCACCTATA 58.744 38.462 0.00 0.00 0.00 1.31
1466 2981 6.100004 CAGTACGAGTTTTGACATCACCTAT 58.900 40.000 0.00 0.00 0.00 2.57
1467 2982 5.466819 CAGTACGAGTTTTGACATCACCTA 58.533 41.667 0.00 0.00 0.00 3.08
1469 2984 3.120649 GCAGTACGAGTTTTGACATCACC 60.121 47.826 0.00 0.00 0.00 4.02
1470 2985 3.493129 TGCAGTACGAGTTTTGACATCAC 59.507 43.478 0.00 0.00 0.00 3.06
1471 2986 3.493129 GTGCAGTACGAGTTTTGACATCA 59.507 43.478 0.00 0.00 0.00 3.07
1472 2987 4.053903 GTGCAGTACGAGTTTTGACATC 57.946 45.455 0.00 0.00 0.00 3.06
1485 3000 2.030185 TGAACTTCTCTCCGTGCAGTAC 60.030 50.000 0.00 0.00 0.00 2.73
1486 3001 2.229062 CTGAACTTCTCTCCGTGCAGTA 59.771 50.000 0.00 0.00 33.09 2.74
1488 3003 1.000283 ACTGAACTTCTCTCCGTGCAG 60.000 52.381 0.00 0.00 41.60 4.41
1489 3004 1.040646 ACTGAACTTCTCTCCGTGCA 58.959 50.000 0.00 0.00 0.00 4.57
1491 3006 7.009631 CACAATAATACTGAACTTCTCTCCGTG 59.990 40.741 0.00 0.00 0.00 4.94
1494 3009 7.201565 GCACACAATAATACTGAACTTCTCTCC 60.202 40.741 0.00 0.00 0.00 3.71
1495 3010 7.331934 TGCACACAATAATACTGAACTTCTCTC 59.668 37.037 0.00 0.00 0.00 3.20
1496 3011 7.118390 GTGCACACAATAATACTGAACTTCTCT 59.882 37.037 13.17 0.00 0.00 3.10
1497 3012 7.237173 GTGCACACAATAATACTGAACTTCTC 58.763 38.462 13.17 0.00 0.00 2.87
1498 3013 6.128553 CGTGCACACAATAATACTGAACTTCT 60.129 38.462 18.64 0.00 0.00 2.85
1499 3014 6.015504 CGTGCACACAATAATACTGAACTTC 58.984 40.000 18.64 0.00 0.00 3.01
1500 3015 5.468746 ACGTGCACACAATAATACTGAACTT 59.531 36.000 18.64 0.00 0.00 2.66
1501 3016 4.994852 ACGTGCACACAATAATACTGAACT 59.005 37.500 18.64 0.00 0.00 3.01
1502 3017 5.079406 CACGTGCACACAATAATACTGAAC 58.921 41.667 18.64 0.00 0.00 3.18
1504 3019 3.124466 GCACGTGCACACAATAATACTGA 59.876 43.478 34.52 0.00 41.59 3.41
1505 3020 3.416277 GCACGTGCACACAATAATACTG 58.584 45.455 34.52 0.00 41.59 2.74
1506 3021 2.093625 CGCACGTGCACACAATAATACT 59.906 45.455 37.03 0.00 42.21 2.12
1507 3022 2.427169 CGCACGTGCACACAATAATAC 58.573 47.619 37.03 6.13 42.21 1.89
1508 3023 1.201976 GCGCACGTGCACACAATAATA 60.202 47.619 37.03 0.00 42.21 0.98
1510 3025 1.082431 GCGCACGTGCACACAATAA 60.082 52.632 37.03 0.00 42.21 1.40
1511 3026 1.776034 TTGCGCACGTGCACACAATA 61.776 50.000 37.03 18.01 46.25 1.90
1562 3084 2.749076 TGCATAAGGTGTGCATGAGTTC 59.251 45.455 0.00 0.00 46.76 3.01
1584 3106 2.560504 TGTGAGCAAAGCTTCGAGAAA 58.439 42.857 0.00 0.00 39.88 2.52
1616 3139 1.315257 CCAAATGGGCAGGGAACTCG 61.315 60.000 0.00 0.00 40.21 4.18
1658 3181 8.880878 AGAAGTCAAGACTCTCTTTTCTTTAC 57.119 34.615 2.78 0.00 41.58 2.01
1732 3255 4.782019 AGACAACAAACAACTTTCAGCA 57.218 36.364 0.00 0.00 0.00 4.41
1741 3264 9.474920 GGAATTATTGATCAAGACAACAAACAA 57.525 29.630 14.54 0.00 0.00 2.83
1803 3326 8.532977 AACAAATAACTGTGGTATTGATTTGC 57.467 30.769 0.00 0.00 36.65 3.68
1971 3494 3.511540 AGAAACATCCATCTCGTGAGTGA 59.488 43.478 0.00 0.00 38.07 3.41
1972 3495 3.854666 AGAAACATCCATCTCGTGAGTG 58.145 45.455 0.00 0.00 0.00 3.51
1973 3496 4.543590 AAGAAACATCCATCTCGTGAGT 57.456 40.909 0.00 0.00 0.00 3.41
1974 3497 6.758416 TCAATAAGAAACATCCATCTCGTGAG 59.242 38.462 0.00 0.00 0.00 3.51
2060 3591 0.893270 TGCGGTAATTTGGCACTGCT 60.893 50.000 10.45 0.00 45.42 4.24
2067 3598 5.280945 CCACAGATATTTGCGGTAATTTGG 58.719 41.667 0.00 0.00 0.00 3.28
2086 3617 1.622811 GTTGCCATTCATTTCCCCACA 59.377 47.619 0.00 0.00 0.00 4.17
2132 3663 3.488363 ACTACCGTGTCCATCTATCTCC 58.512 50.000 0.00 0.00 0.00 3.71
2139 3670 2.283298 TCGACTACTACCGTGTCCATC 58.717 52.381 0.00 0.00 0.00 3.51
2157 3688 1.739562 GTGCACTGGAGAAGCCTCG 60.740 63.158 10.32 0.00 40.33 4.63
2207 3748 5.724328 TGCAGACTTGTTACTAGATTCAGG 58.276 41.667 0.00 0.00 0.00 3.86
2235 3776 3.999001 CTGAGAAGTGAATGCTGCTAACA 59.001 43.478 0.00 0.00 0.00 2.41
2272 3816 9.672086 GTACTATGCAGTTCTAGAATTACTCTG 57.328 37.037 8.75 11.47 36.14 3.35
2303 3847 5.225129 CGAAACAGCGTTCATAAATTACTGC 59.775 40.000 0.00 0.00 0.00 4.40
2520 4064 7.415206 GCTCAAACCTTTCAGAGAAGTTTGTAA 60.415 37.037 12.61 0.00 33.87 2.41
2589 4133 3.999001 GGAAGAAATTCCTACCGTTTCGT 59.001 43.478 0.00 0.00 38.09 3.85
2614 4158 7.042725 TCGCTAATCTCTTACAAATACATGCAC 60.043 37.037 0.00 0.00 0.00 4.57
2638 4182 0.848942 GCAGCGTCTATGTCATGTCG 59.151 55.000 0.00 0.00 0.00 4.35
2643 4190 2.741759 TTCAAGCAGCGTCTATGTCA 57.258 45.000 0.00 0.00 0.00 3.58
2644 4191 5.718649 TTATTTCAAGCAGCGTCTATGTC 57.281 39.130 0.00 0.00 0.00 3.06
2650 4197 5.572211 TGATCAATTATTTCAAGCAGCGTC 58.428 37.500 0.00 0.00 0.00 5.19
2717 4269 2.664851 TGCTTCGCTCCCAACACG 60.665 61.111 0.00 0.00 0.00 4.49
2720 4272 2.665185 ACGTGCTTCGCTCCCAAC 60.665 61.111 0.00 0.00 44.19 3.77
2802 4354 7.415877 CCACAATGCATTGATCAGTCTTATTGA 60.416 37.037 38.99 0.00 40.14 2.57
2805 4357 6.124340 TCCACAATGCATTGATCAGTCTTAT 58.876 36.000 38.99 15.02 40.14 1.73
2806 4358 5.499313 TCCACAATGCATTGATCAGTCTTA 58.501 37.500 38.99 14.72 40.14 2.10
2808 4360 3.959293 TCCACAATGCATTGATCAGTCT 58.041 40.909 38.99 17.11 40.14 3.24
2809 4361 4.913335 ATCCACAATGCATTGATCAGTC 57.087 40.909 38.99 0.00 40.14 3.51
2810 4362 5.653330 TGTAATCCACAATGCATTGATCAGT 59.347 36.000 38.99 23.85 40.14 3.41
2817 4386 8.020777 TCCATTTATGTAATCCACAATGCATT 57.979 30.769 5.99 5.99 41.55 3.56
2988 4586 3.118555 TCCGAAGAACAGTTGTCCTTCAA 60.119 43.478 11.06 0.00 35.89 2.69
2995 4593 2.807108 GCCTTCTCCGAAGAACAGTTGT 60.807 50.000 5.24 0.00 36.59 3.32
2996 4594 1.801178 GCCTTCTCCGAAGAACAGTTG 59.199 52.381 5.24 0.00 36.59 3.16
3115 4729 4.439305 TGTGTCAGAATTGCATTAAGGC 57.561 40.909 4.88 4.88 0.00 4.35
3116 4730 6.127814 ACAGATGTGTCAGAATTGCATTAAGG 60.128 38.462 0.00 0.00 26.76 2.69
3117 4731 6.849502 ACAGATGTGTCAGAATTGCATTAAG 58.150 36.000 0.00 0.00 26.76 1.85
3118 4732 6.822667 ACAGATGTGTCAGAATTGCATTAA 57.177 33.333 0.00 0.00 26.76 1.40
3121 4735 5.706833 TGTAACAGATGTGTCAGAATTGCAT 59.293 36.000 0.00 0.00 35.08 3.96
3128 4742 4.270245 TGCATGTAACAGATGTGTCAGA 57.730 40.909 0.00 0.00 35.08 3.27
3149 4763 4.219070 GCCTTATTCGGTAACCAAAACCTT 59.781 41.667 0.00 0.00 34.66 3.50
3150 4764 3.760151 GCCTTATTCGGTAACCAAAACCT 59.240 43.478 0.00 0.00 34.66 3.50
3151 4765 3.506844 TGCCTTATTCGGTAACCAAAACC 59.493 43.478 0.00 0.00 0.00 3.27
3152 4766 4.769859 TGCCTTATTCGGTAACCAAAAC 57.230 40.909 0.00 0.00 0.00 2.43
3153 4767 5.986501 ATTGCCTTATTCGGTAACCAAAA 57.013 34.783 0.00 0.00 31.36 2.44
3155 4769 5.986501 AAATTGCCTTATTCGGTAACCAA 57.013 34.783 0.00 0.00 31.36 3.67
3156 4770 5.986501 AAAATTGCCTTATTCGGTAACCA 57.013 34.783 0.00 0.00 31.36 3.67
3157 4771 6.267817 GGTAAAATTGCCTTATTCGGTAACC 58.732 40.000 0.00 0.00 31.36 2.85
3158 4772 5.967088 CGGTAAAATTGCCTTATTCGGTAAC 59.033 40.000 0.00 0.00 31.36 2.50
3159 4773 5.879223 TCGGTAAAATTGCCTTATTCGGTAA 59.121 36.000 0.00 0.00 33.14 2.85
3160 4774 5.426504 TCGGTAAAATTGCCTTATTCGGTA 58.573 37.500 0.00 0.00 0.00 4.02
3161 4775 4.263435 TCGGTAAAATTGCCTTATTCGGT 58.737 39.130 0.00 0.00 0.00 4.69
3162 4776 4.261031 CCTCGGTAAAATTGCCTTATTCGG 60.261 45.833 0.00 0.00 0.00 4.30
3163 4777 4.261031 CCCTCGGTAAAATTGCCTTATTCG 60.261 45.833 0.00 0.00 0.00 3.34
3164 4778 4.037565 CCCCTCGGTAAAATTGCCTTATTC 59.962 45.833 0.00 0.00 0.00 1.75
3165 4779 3.958147 CCCCTCGGTAAAATTGCCTTATT 59.042 43.478 0.00 0.00 0.00 1.40
3166 4780 3.562182 CCCCTCGGTAAAATTGCCTTAT 58.438 45.455 0.00 0.00 0.00 1.73
3167 4781 2.946791 GCCCCTCGGTAAAATTGCCTTA 60.947 50.000 0.00 0.00 0.00 2.69
3168 4782 1.847328 CCCCTCGGTAAAATTGCCTT 58.153 50.000 0.00 0.00 0.00 4.35
3169 4783 0.683179 GCCCCTCGGTAAAATTGCCT 60.683 55.000 0.00 0.00 0.00 4.75
3170 4784 0.968393 TGCCCCTCGGTAAAATTGCC 60.968 55.000 0.00 0.00 0.00 4.52
3171 4785 0.172578 GTGCCCCTCGGTAAAATTGC 59.827 55.000 0.00 0.00 0.00 3.56
3172 4786 0.450184 CGTGCCCCTCGGTAAAATTG 59.550 55.000 0.00 0.00 0.00 2.32
3173 4787 0.678684 CCGTGCCCCTCGGTAAAATT 60.679 55.000 0.00 0.00 42.62 1.82
3175 4789 1.555477 ATCCGTGCCCCTCGGTAAAA 61.555 55.000 4.36 0.00 46.86 1.52
3176 4790 0.687098 TATCCGTGCCCCTCGGTAAA 60.687 55.000 4.36 0.00 46.86 2.01
3177 4791 0.687098 TTATCCGTGCCCCTCGGTAA 60.687 55.000 4.36 1.18 46.86 2.85
3179 4793 1.342672 ATTTATCCGTGCCCCTCGGT 61.343 55.000 4.36 0.00 46.86 4.69
3181 4795 0.179056 ACATTTATCCGTGCCCCTCG 60.179 55.000 0.00 0.00 0.00 4.63
3182 4796 1.308998 CACATTTATCCGTGCCCCTC 58.691 55.000 0.00 0.00 0.00 4.30
3183 4797 0.106719 CCACATTTATCCGTGCCCCT 60.107 55.000 0.00 0.00 0.00 4.79
3184 4798 0.395173 ACCACATTTATCCGTGCCCC 60.395 55.000 0.00 0.00 0.00 5.80
3185 4799 1.470051 AACCACATTTATCCGTGCCC 58.530 50.000 0.00 0.00 0.00 5.36
3186 4800 2.356695 GGTAACCACATTTATCCGTGCC 59.643 50.000 0.00 0.00 0.00 5.01
3187 4801 3.011119 TGGTAACCACATTTATCCGTGC 58.989 45.455 0.00 0.00 0.00 5.34
3210 4824 4.376340 TTCTCGGTATTTCTCGGTAACC 57.624 45.455 0.00 0.00 0.00 2.85
3211 4825 8.585189 AAATATTCTCGGTATTTCTCGGTAAC 57.415 34.615 0.00 0.00 28.29 2.50
3213 4827 7.944061 TGAAATATTCTCGGTATTTCTCGGTA 58.056 34.615 15.51 0.00 43.75 4.02
3214 4828 6.812998 TGAAATATTCTCGGTATTTCTCGGT 58.187 36.000 15.51 0.00 43.75 4.69
3216 4830 7.284351 GCTTGAAATATTCTCGGTATTTCTCG 58.716 38.462 15.51 9.77 43.75 4.04
3217 4831 7.169308 TCGCTTGAAATATTCTCGGTATTTCTC 59.831 37.037 15.51 7.51 43.75 2.87
3218 4832 6.984474 TCGCTTGAAATATTCTCGGTATTTCT 59.016 34.615 15.51 0.00 43.75 2.52
3219 4833 7.173863 TCGCTTGAAATATTCTCGGTATTTC 57.826 36.000 10.23 10.23 43.70 2.17
3220 4834 7.548196 TTCGCTTGAAATATTCTCGGTATTT 57.452 32.000 0.00 0.00 35.16 1.40
3222 4836 7.730364 AATTCGCTTGAAATATTCTCGGTAT 57.270 32.000 0.00 0.00 34.72 2.73
3223 4837 7.548196 AAATTCGCTTGAAATATTCTCGGTA 57.452 32.000 0.00 0.00 34.72 4.02
3280 4935 9.489232 AGAGGTCTCTGGTTCGAATATTCGTTC 62.489 44.444 31.01 24.18 43.74 3.95
3281 4936 7.803110 AGAGGTCTCTGGTTCGAATATTCGTT 61.803 42.308 31.01 8.74 43.74 3.85
3282 4937 6.383068 AGAGGTCTCTGGTTCGAATATTCGT 61.383 44.000 31.01 12.27 43.74 3.85
3283 4938 4.036971 AGAGGTCTCTGGTTCGAATATTCG 59.963 45.833 27.99 27.99 44.22 3.34
3284 4939 5.067936 TGAGAGGTCTCTGGTTCGAATATTC 59.932 44.000 0.00 5.30 43.25 1.75
3285 4940 4.956700 TGAGAGGTCTCTGGTTCGAATATT 59.043 41.667 0.00 0.00 43.25 1.28
3286 4941 4.537751 TGAGAGGTCTCTGGTTCGAATAT 58.462 43.478 0.00 0.00 43.25 1.28
3288 4943 2.808919 TGAGAGGTCTCTGGTTCGAAT 58.191 47.619 0.00 0.00 43.25 3.34
3289 4944 2.287977 TGAGAGGTCTCTGGTTCGAA 57.712 50.000 5.09 0.00 43.25 3.71
3291 4946 3.386768 TTTTGAGAGGTCTCTGGTTCG 57.613 47.619 5.09 0.00 43.25 3.95
3294 5294 4.689062 TCCTATTTTGAGAGGTCTCTGGT 58.311 43.478 5.09 0.00 43.25 4.00
3305 5305 8.265055 TGGTATCAACCTAGTTCCTATTTTGAG 58.735 37.037 0.00 0.00 46.91 3.02
3306 5306 8.153221 TGGTATCAACCTAGTTCCTATTTTGA 57.847 34.615 0.00 0.00 46.91 2.69
3307 5307 8.674607 GTTGGTATCAACCTAGTTCCTATTTTG 58.325 37.037 7.70 0.00 46.91 2.44
3308 5308 8.803397 GTTGGTATCAACCTAGTTCCTATTTT 57.197 34.615 7.70 0.00 46.91 1.82
3323 5323 3.088532 GGTTCTGGCATGTTGGTATCAA 58.911 45.455 0.00 0.00 0.00 2.57
3325 5325 2.722094 TGGTTCTGGCATGTTGGTATC 58.278 47.619 0.00 0.00 0.00 2.24
3326 5326 2.825532 GTTGGTTCTGGCATGTTGGTAT 59.174 45.455 0.00 0.00 0.00 2.73
3328 5328 1.039856 GTTGGTTCTGGCATGTTGGT 58.960 50.000 0.00 0.00 0.00 3.67
3329 5329 1.270550 GAGTTGGTTCTGGCATGTTGG 59.729 52.381 0.00 0.00 0.00 3.77
3330 5330 2.227388 GAGAGTTGGTTCTGGCATGTTG 59.773 50.000 0.00 0.00 0.00 3.33
3332 5332 1.421268 TGAGAGTTGGTTCTGGCATGT 59.579 47.619 0.00 0.00 0.00 3.21
3338 5338 3.641434 ATCCCATGAGAGTTGGTTCTG 57.359 47.619 0.00 0.00 31.99 3.02
3339 5339 5.779241 TTAATCCCATGAGAGTTGGTTCT 57.221 39.130 0.00 0.00 31.99 3.01
3340 5340 7.993183 TCTAATTAATCCCATGAGAGTTGGTTC 59.007 37.037 0.00 0.00 31.99 3.62
3342 5342 7.451731 TCTAATTAATCCCATGAGAGTTGGT 57.548 36.000 0.00 0.00 31.99 3.67
3343 5343 7.609532 GGATCTAATTAATCCCATGAGAGTTGG 59.390 40.741 12.26 0.00 37.33 3.77
3344 5344 8.381636 AGGATCTAATTAATCCCATGAGAGTTG 58.618 37.037 16.62 0.00 43.20 3.16
3345 5345 8.517323 AGGATCTAATTAATCCCATGAGAGTT 57.483 34.615 16.62 0.00 43.20 3.01
3347 5347 8.194104 CGTAGGATCTAATTAATCCCATGAGAG 58.806 40.741 16.62 0.00 43.20 3.20
3348 5348 7.674348 ACGTAGGATCTAATTAATCCCATGAGA 59.326 37.037 16.62 0.00 43.20 3.27
3349 5349 7.841956 ACGTAGGATCTAATTAATCCCATGAG 58.158 38.462 16.62 10.35 43.20 2.90
3353 5353 8.716674 AAGTACGTAGGATCTAATTAATCCCA 57.283 34.615 16.62 6.79 43.20 4.37
3364 5364 8.341173 CGATTTACAGTAAAGTACGTAGGATCT 58.659 37.037 11.41 0.00 0.00 2.75
3365 5365 8.338259 TCGATTTACAGTAAAGTACGTAGGATC 58.662 37.037 19.69 7.47 0.00 3.36
3366 5366 8.213518 TCGATTTACAGTAAAGTACGTAGGAT 57.786 34.615 19.69 1.09 0.00 3.24
3367 5367 7.334421 ACTCGATTTACAGTAAAGTACGTAGGA 59.666 37.037 19.69 8.28 0.00 2.94
3368 5368 7.427606 CACTCGATTTACAGTAAAGTACGTAGG 59.572 40.741 19.69 15.59 0.00 3.18
3369 5369 7.959651 ACACTCGATTTACAGTAAAGTACGTAG 59.040 37.037 19.69 17.80 0.00 3.51
3370 5370 7.806690 ACACTCGATTTACAGTAAAGTACGTA 58.193 34.615 19.69 0.00 0.00 3.57
3371 5371 6.672147 ACACTCGATTTACAGTAAAGTACGT 58.328 36.000 19.69 0.00 0.00 3.57
3372 5372 7.558435 AACACTCGATTTACAGTAAAGTACG 57.442 36.000 11.41 14.68 0.00 3.67
3379 5379 9.491675 TGGAATTTAAACACTCGATTTACAGTA 57.508 29.630 0.00 0.00 0.00 2.74
3380 5380 8.385898 TGGAATTTAAACACTCGATTTACAGT 57.614 30.769 0.00 0.00 0.00 3.55
3381 5381 9.672086 TTTGGAATTTAAACACTCGATTTACAG 57.328 29.630 0.00 0.00 0.00 2.74
3387 5387 9.757227 TGAAATTTTGGAATTTAAACACTCGAT 57.243 25.926 0.00 0.00 43.61 3.59
3388 5388 9.587772 TTGAAATTTTGGAATTTAAACACTCGA 57.412 25.926 0.00 0.00 43.61 4.04
3426 5426 1.745232 ATCGCCATACCGAGCAAAAA 58.255 45.000 0.00 0.00 40.97 1.94
3427 5427 1.745232 AATCGCCATACCGAGCAAAA 58.255 45.000 0.00 0.00 40.97 2.44
3428 5428 1.745232 AAATCGCCATACCGAGCAAA 58.255 45.000 0.00 0.00 40.97 3.68
3429 5429 2.206750 GTAAATCGCCATACCGAGCAA 58.793 47.619 0.00 0.00 40.97 3.91
3430 5430 1.539496 GGTAAATCGCCATACCGAGCA 60.539 52.381 0.00 0.00 40.97 4.26
3431 5431 1.145803 GGTAAATCGCCATACCGAGC 58.854 55.000 0.00 0.00 40.97 5.03
3435 5435 1.607251 CCCTCGGTAAATCGCCATACC 60.607 57.143 0.00 0.00 38.55 2.73
3436 5436 1.607251 CCCCTCGGTAAATCGCCATAC 60.607 57.143 0.00 0.00 0.00 2.39
3437 5437 0.682852 CCCCTCGGTAAATCGCCATA 59.317 55.000 0.00 0.00 0.00 2.74
3438 5438 1.342672 ACCCCTCGGTAAATCGCCAT 61.343 55.000 0.00 0.00 42.18 4.40
3439 5439 0.687098 TACCCCTCGGTAAATCGCCA 60.687 55.000 0.00 0.00 41.91 5.69
3440 5440 0.249615 GTACCCCTCGGTAAATCGCC 60.250 60.000 0.00 0.00 46.44 5.54
3441 5441 0.595825 CGTACCCCTCGGTAAATCGC 60.596 60.000 0.00 0.00 46.44 4.58
3442 5442 0.031178 CCGTACCCCTCGGTAAATCG 59.969 60.000 0.00 0.00 46.44 3.34
3443 5443 1.402787 TCCGTACCCCTCGGTAAATC 58.597 55.000 4.36 0.00 46.44 2.17
3444 5444 1.864669 TTCCGTACCCCTCGGTAAAT 58.135 50.000 4.36 0.00 46.44 1.40
3445 5445 1.638529 TTTCCGTACCCCTCGGTAAA 58.361 50.000 4.36 2.21 46.44 2.01
3446 5446 1.864669 ATTTCCGTACCCCTCGGTAA 58.135 50.000 4.36 1.98 46.44 2.85
3447 5447 2.306847 GTATTTCCGTACCCCTCGGTA 58.693 52.381 4.36 0.00 46.86 4.02
3448 5448 1.114627 GTATTTCCGTACCCCTCGGT 58.885 55.000 4.36 0.00 46.86 4.69
3450 5450 0.740737 ACGTATTTCCGTACCCCTCG 59.259 55.000 0.00 0.00 39.73 4.63
3451 5451 1.202452 CCACGTATTTCCGTACCCCTC 60.202 57.143 0.00 0.00 39.45 4.30
3452 5452 0.826062 CCACGTATTTCCGTACCCCT 59.174 55.000 0.00 0.00 39.45 4.79
3453 5453 0.536724 ACCACGTATTTCCGTACCCC 59.463 55.000 0.00 0.00 39.45 4.95
3454 5454 3.186909 GTTACCACGTATTTCCGTACCC 58.813 50.000 0.00 0.00 39.45 3.69
3455 5455 3.186909 GGTTACCACGTATTTCCGTACC 58.813 50.000 0.00 0.00 39.45 3.34
3456 5456 3.843999 TGGTTACCACGTATTTCCGTAC 58.156 45.455 0.00 0.00 39.45 3.67
3457 5457 4.431809 CATGGTTACCACGTATTTCCGTA 58.568 43.478 6.10 0.00 39.45 4.02
3458 5458 3.264104 CATGGTTACCACGTATTTCCGT 58.736 45.455 6.10 0.00 42.87 4.69
3459 5459 2.610374 CCATGGTTACCACGTATTTCCG 59.390 50.000 6.10 0.00 35.80 4.30
3460 5460 2.946990 CCCATGGTTACCACGTATTTCC 59.053 50.000 6.10 0.00 35.80 3.13
3461 5461 3.876341 TCCCATGGTTACCACGTATTTC 58.124 45.455 6.10 0.00 35.80 2.17
3462 5462 4.304048 TTCCCATGGTTACCACGTATTT 57.696 40.909 6.10 0.00 35.80 1.40
3463 5463 4.304048 TTTCCCATGGTTACCACGTATT 57.696 40.909 6.10 0.00 35.80 1.89
3464 5464 4.165372 AGATTTCCCATGGTTACCACGTAT 59.835 41.667 6.10 0.00 35.80 3.06
3465 5465 3.520317 AGATTTCCCATGGTTACCACGTA 59.480 43.478 6.10 0.00 35.80 3.57
3466 5466 2.307686 AGATTTCCCATGGTTACCACGT 59.692 45.455 6.10 0.00 35.80 4.49
3467 5467 2.999331 AGATTTCCCATGGTTACCACG 58.001 47.619 6.10 0.00 35.80 4.94
3468 5468 4.340617 TCAAGATTTCCCATGGTTACCAC 58.659 43.478 6.10 0.00 35.80 4.16
3469 5469 4.666412 TCAAGATTTCCCATGGTTACCA 57.334 40.909 6.53 6.53 38.19 3.25
3470 5470 5.993748 TTTCAAGATTTCCCATGGTTACC 57.006 39.130 11.73 0.00 0.00 2.85
3471 5471 7.275560 CGAAATTTCAAGATTTCCCATGGTTAC 59.724 37.037 17.99 0.00 41.02 2.50
3472 5472 7.177568 TCGAAATTTCAAGATTTCCCATGGTTA 59.822 33.333 17.99 0.00 41.02 2.85
3473 5473 6.014669 TCGAAATTTCAAGATTTCCCATGGTT 60.015 34.615 17.99 0.00 41.02 3.67
3474 5474 5.480073 TCGAAATTTCAAGATTTCCCATGGT 59.520 36.000 17.99 0.00 41.02 3.55
3475 5475 5.807011 GTCGAAATTTCAAGATTTCCCATGG 59.193 40.000 17.99 4.14 41.02 3.66
3476 5476 5.807011 GGTCGAAATTTCAAGATTTCCCATG 59.193 40.000 17.99 0.00 41.02 3.66
3477 5477 5.393027 CGGTCGAAATTTCAAGATTTCCCAT 60.393 40.000 17.99 0.00 41.02 4.00
3478 5478 4.083003 CGGTCGAAATTTCAAGATTTCCCA 60.083 41.667 17.99 0.00 41.02 4.37
3479 5479 4.412207 CGGTCGAAATTTCAAGATTTCCC 58.588 43.478 17.99 5.09 41.02 3.97
3480 5480 4.082949 ACCGGTCGAAATTTCAAGATTTCC 60.083 41.667 17.99 5.39 41.02 3.13
3481 5481 5.043189 ACCGGTCGAAATTTCAAGATTTC 57.957 39.130 17.99 0.00 40.80 2.17
3482 5482 6.376177 GTTACCGGTCGAAATTTCAAGATTT 58.624 36.000 12.40 0.99 32.16 2.17
3483 5483 5.106436 GGTTACCGGTCGAAATTTCAAGATT 60.106 40.000 12.40 0.52 0.00 2.40
3484 5484 4.393990 GGTTACCGGTCGAAATTTCAAGAT 59.606 41.667 12.40 1.22 0.00 2.40
3485 5485 3.747529 GGTTACCGGTCGAAATTTCAAGA 59.252 43.478 12.40 5.43 0.00 3.02
3486 5486 3.499157 TGGTTACCGGTCGAAATTTCAAG 59.501 43.478 12.40 3.07 0.00 3.02
3487 5487 3.474600 TGGTTACCGGTCGAAATTTCAA 58.525 40.909 12.40 0.00 0.00 2.69
3488 5488 3.123157 TGGTTACCGGTCGAAATTTCA 57.877 42.857 12.40 2.95 0.00 2.69
3489 5489 4.486574 TTTGGTTACCGGTCGAAATTTC 57.513 40.909 12.40 8.20 0.00 2.17
3490 5490 4.499526 GGTTTTGGTTACCGGTCGAAATTT 60.500 41.667 12.40 0.00 0.00 1.82
3491 5491 3.004629 GGTTTTGGTTACCGGTCGAAATT 59.995 43.478 12.40 0.00 0.00 1.82
3492 5492 2.553602 GGTTTTGGTTACCGGTCGAAAT 59.446 45.455 12.40 0.00 0.00 2.17
3493 5493 1.946081 GGTTTTGGTTACCGGTCGAAA 59.054 47.619 12.40 6.74 0.00 3.46
3494 5494 1.140652 AGGTTTTGGTTACCGGTCGAA 59.859 47.619 12.40 0.00 40.69 3.71
3495 5495 0.758123 AGGTTTTGGTTACCGGTCGA 59.242 50.000 12.40 0.00 40.69 4.20
3496 5496 1.264826 CAAGGTTTTGGTTACCGGTCG 59.735 52.381 12.40 0.00 40.69 4.79
3507 5507 8.303156 TCATTCATACATGTAACCAAGGTTTTG 58.697 33.333 10.14 8.41 39.31 2.44
3508 5508 8.415950 TCATTCATACATGTAACCAAGGTTTT 57.584 30.769 10.14 0.00 39.31 2.43
3509 5509 8.415950 TTCATTCATACATGTAACCAAGGTTT 57.584 30.769 10.14 0.00 39.31 3.27
3510 5510 7.122650 CCTTCATTCATACATGTAACCAAGGTT 59.877 37.037 10.14 9.74 41.65 3.50
3511 5511 6.603201 CCTTCATTCATACATGTAACCAAGGT 59.397 38.462 10.14 0.00 0.00 3.50
3512 5512 6.039717 CCCTTCATTCATACATGTAACCAAGG 59.960 42.308 10.14 13.84 0.00 3.61
3513 5513 6.460123 GCCCTTCATTCATACATGTAACCAAG 60.460 42.308 10.14 6.53 0.00 3.61
3514 5514 5.359576 GCCCTTCATTCATACATGTAACCAA 59.640 40.000 10.14 3.48 0.00 3.67
3515 5515 4.887071 GCCCTTCATTCATACATGTAACCA 59.113 41.667 10.14 0.00 0.00 3.67
3516 5516 5.133221 AGCCCTTCATTCATACATGTAACC 58.867 41.667 10.14 0.00 0.00 2.85
3517 5517 5.050091 CGAGCCCTTCATTCATACATGTAAC 60.050 44.000 10.14 0.00 0.00 2.50
3518 5518 5.056480 CGAGCCCTTCATTCATACATGTAA 58.944 41.667 10.14 0.00 0.00 2.41
3519 5519 4.503123 CCGAGCCCTTCATTCATACATGTA 60.503 45.833 8.27 8.27 0.00 2.29
3520 5520 3.470709 CGAGCCCTTCATTCATACATGT 58.529 45.455 2.69 2.69 0.00 3.21
3521 5521 2.810274 CCGAGCCCTTCATTCATACATG 59.190 50.000 0.00 0.00 0.00 3.21
3674 5688 1.985622 TTCCTTCCATCCATCCAGGT 58.014 50.000 0.00 0.00 39.02 4.00
3721 5735 8.786898 TGTCCTGAGAAAATAATCAAGAAACAG 58.213 33.333 0.00 0.00 0.00 3.16
3800 5814 2.202892 GATCGTCCTGCGGAACCC 60.203 66.667 0.00 0.00 41.72 4.11
3802 5816 2.158959 CGTGATCGTCCTGCGGAAC 61.159 63.158 0.00 0.00 41.72 3.62
3925 5940 9.738832 GGTTAACTTTGTAATAAGCACTTTTCA 57.261 29.630 5.42 0.00 0.00 2.69
3926 5941 9.188588 GGGTTAACTTTGTAATAAGCACTTTTC 57.811 33.333 5.42 0.00 0.00 2.29
3927 5942 7.863877 CGGGTTAACTTTGTAATAAGCACTTTT 59.136 33.333 5.42 0.00 0.00 2.27
3929 5944 6.072342 CCGGGTTAACTTTGTAATAAGCACTT 60.072 38.462 5.42 0.00 0.00 3.16
3930 5945 5.413523 CCGGGTTAACTTTGTAATAAGCACT 59.586 40.000 5.42 0.00 0.00 4.40
3931 5946 5.412286 TCCGGGTTAACTTTGTAATAAGCAC 59.588 40.000 0.00 0.00 0.00 4.40
3932 5947 5.558818 TCCGGGTTAACTTTGTAATAAGCA 58.441 37.500 0.00 0.00 0.00 3.91
3933 5948 5.645067 ACTCCGGGTTAACTTTGTAATAAGC 59.355 40.000 0.00 0.00 0.00 3.09
3934 5949 7.010830 GCTACTCCGGGTTAACTTTGTAATAAG 59.989 40.741 0.00 0.00 0.00 1.73
3949 5964 1.498145 ACTAGGTATGCTACTCCGGGT 59.502 52.381 0.00 0.32 0.00 5.28
3952 5967 6.072783 GGTAACTTACTAGGTATGCTACTCCG 60.073 46.154 0.00 0.00 0.00 4.63
3955 5970 6.676558 TGGGTAACTTACTAGGTATGCTACT 58.323 40.000 0.00 0.00 0.00 2.57
3959 5974 6.047231 CAGTTGGGTAACTTACTAGGTATGC 58.953 44.000 0.00 0.00 44.57 3.14
3960 5975 7.179076 ACAGTTGGGTAACTTACTAGGTATG 57.821 40.000 0.00 0.00 44.57 2.39
3961 5976 7.803487 AACAGTTGGGTAACTTACTAGGTAT 57.197 36.000 0.00 0.00 44.57 2.73
3999 6043 1.458486 GTTCACCACCATGTCCCCA 59.542 57.895 0.00 0.00 0.00 4.96
4296 6343 1.911454 ATGAGTCCCATTCCCATCCA 58.089 50.000 0.00 0.00 29.34 3.41
4297 6344 2.590821 CAATGAGTCCCATTCCCATCC 58.409 52.381 0.00 0.00 43.27 3.51
4298 6345 2.175499 TCCAATGAGTCCCATTCCCATC 59.825 50.000 0.00 0.00 43.27 3.51
4299 6346 2.176364 CTCCAATGAGTCCCATTCCCAT 59.824 50.000 0.00 0.00 43.27 4.00
4300 6347 1.565759 CTCCAATGAGTCCCATTCCCA 59.434 52.381 0.00 0.00 43.27 4.37
4301 6348 2.355010 CTCCAATGAGTCCCATTCCC 57.645 55.000 0.00 0.00 43.27 3.97
4311 6358 4.344390 TCATCCTCATCTCACTCCAATGAG 59.656 45.833 4.91 4.91 46.40 2.90
4312 6359 4.292643 TCATCCTCATCTCACTCCAATGA 58.707 43.478 0.00 0.00 0.00 2.57
4313 6360 4.344390 TCTCATCCTCATCTCACTCCAATG 59.656 45.833 0.00 0.00 0.00 2.82
4314 6361 4.344679 GTCTCATCCTCATCTCACTCCAAT 59.655 45.833 0.00 0.00 0.00 3.16
4315 6362 3.703556 GTCTCATCCTCATCTCACTCCAA 59.296 47.826 0.00 0.00 0.00 3.53
4316 6363 3.053019 AGTCTCATCCTCATCTCACTCCA 60.053 47.826 0.00 0.00 0.00 3.86
4338 6385 4.264253 CAACCCAGCAGATTGATTGAGTA 58.736 43.478 0.00 0.00 0.00 2.59
4410 6457 1.514228 CGTAGCGCTGCGAGAAGAA 60.514 57.895 39.29 3.97 41.16 2.52
4420 6467 2.745100 TGAGGTCGTCGTAGCGCT 60.745 61.111 17.26 17.26 0.00 5.92
4513 6565 5.499268 TGTTACTACATTTTGACGCGTAC 57.501 39.130 13.97 6.75 0.00 3.67
4546 6598 0.853419 GAGCCGTGCTTATCTTACGC 59.147 55.000 0.00 0.00 39.88 4.42
4547 6599 2.493713 AGAGCCGTGCTTATCTTACG 57.506 50.000 0.00 0.00 39.88 3.18
4552 6604 2.622436 AGTCAAAGAGCCGTGCTTATC 58.378 47.619 0.00 0.00 39.88 1.75
4554 6606 2.143122 CAAGTCAAAGAGCCGTGCTTA 58.857 47.619 0.00 0.00 39.88 3.09
4555 6607 0.947244 CAAGTCAAAGAGCCGTGCTT 59.053 50.000 0.00 0.00 39.88 3.91
4558 6683 1.308998 AACCAAGTCAAAGAGCCGTG 58.691 50.000 0.00 0.00 0.00 4.94
4659 6785 8.017373 CGAAATCAAAGTAGAATTCTTCTGCAA 58.983 33.333 14.36 3.48 43.75 4.08
4671 6797 6.049955 ACTTGGGATCGAAATCAAAGTAGA 57.950 37.500 0.00 0.00 38.00 2.59
4672 6798 5.294552 GGACTTGGGATCGAAATCAAAGTAG 59.705 44.000 5.98 0.00 39.00 2.57
4769 6895 8.957466 GGCTGGAAATTTGACTAGTTAAATACT 58.043 33.333 21.85 14.08 41.04 2.12
4770 6896 8.736244 TGGCTGGAAATTTGACTAGTTAAATAC 58.264 33.333 21.85 18.14 30.08 1.89
4781 6932 2.407090 GCAACTGGCTGGAAATTTGAC 58.593 47.619 0.00 0.00 40.25 3.18
4782 6933 2.818130 GCAACTGGCTGGAAATTTGA 57.182 45.000 0.00 0.00 40.25 2.69
4797 6948 4.127171 TCTCAAGTTTCAGTGGTAGCAAC 58.873 43.478 0.00 0.00 0.00 4.17
4798 6949 4.415881 TCTCAAGTTTCAGTGGTAGCAA 57.584 40.909 0.00 0.00 0.00 3.91
4800 6951 4.127171 TGTTCTCAAGTTTCAGTGGTAGC 58.873 43.478 0.00 0.00 0.00 3.58
4801 6952 6.867662 ATTGTTCTCAAGTTTCAGTGGTAG 57.132 37.500 0.00 0.00 36.97 3.18
4802 6953 6.601613 ACAATTGTTCTCAAGTTTCAGTGGTA 59.398 34.615 4.92 0.00 36.97 3.25
4813 6968 6.396829 AAAAGGGAGACAATTGTTCTCAAG 57.603 37.500 25.73 0.00 36.97 3.02
4840 6995 5.691754 GGCGATCAATGTTTAAATCATTCCC 59.308 40.000 10.94 5.95 33.92 3.97
4841 6996 6.272318 TGGCGATCAATGTTTAAATCATTCC 58.728 36.000 10.94 9.91 33.92 3.01
4874 7029 2.433239 AGGGAGACAATTATTACCGCGT 59.567 45.455 4.92 0.00 0.00 6.01
4875 7030 3.107642 AGGGAGACAATTATTACCGCG 57.892 47.619 0.00 0.00 0.00 6.46
4883 7038 4.638421 CCGCATAACAAAGGGAGACAATTA 59.362 41.667 0.00 0.00 0.00 1.40
4905 7060 1.271434 ACCCGGAGAAGAAAAAGAGCC 60.271 52.381 0.73 0.00 0.00 4.70
4912 7067 5.946972 TGCATAATAAAACCCGGAGAAGAAA 59.053 36.000 0.73 0.00 0.00 2.52
4915 7070 5.357032 AGTTGCATAATAAAACCCGGAGAAG 59.643 40.000 0.73 0.00 0.00 2.85
4916 7071 5.258051 AGTTGCATAATAAAACCCGGAGAA 58.742 37.500 0.73 0.00 0.00 2.87
4918 7073 4.881850 AGAGTTGCATAATAAAACCCGGAG 59.118 41.667 0.73 0.00 0.00 4.63
4957 7116 6.043411 GGAGTTGCATAACTAGTGGAGTAAG 58.957 44.000 0.00 0.00 46.79 2.34
4986 7145 9.995003 AAACAACATTTGTAATACATTCATGGT 57.005 25.926 0.00 0.00 44.59 3.55
5024 7184 2.091610 TGGTCATGGGTTTCAACTTCCA 60.092 45.455 0.00 0.00 0.00 3.53
5034 7194 1.635487 ACTATGCAGTGGTCATGGGTT 59.365 47.619 0.00 0.00 32.25 4.11
5073 7235 5.874831 TGTTGGTTGCATAACGCTAATAAG 58.125 37.500 0.00 0.00 43.06 1.73
5083 7245 3.680490 TCTTCGGATGTTGGTTGCATAA 58.320 40.909 0.00 0.00 0.00 1.90
5084 7246 3.342377 TCTTCGGATGTTGGTTGCATA 57.658 42.857 0.00 0.00 0.00 3.14
5087 7249 1.401539 GCTTCTTCGGATGTTGGTTGC 60.402 52.381 0.00 0.00 0.00 4.17
5107 7269 9.384682 GATTGGTTTTATTTTCTGCATTTTGTG 57.615 29.630 0.00 0.00 0.00 3.33
5144 7306 7.844493 TGTATAGGAGTGTAATCCCGTTATT 57.156 36.000 0.00 0.00 40.53 1.40
5150 7312 9.482175 AGAGATTATGTATAGGAGTGTAATCCC 57.518 37.037 0.00 0.00 40.53 3.85
5162 7324 8.470805 AGCGGTCCAATAAGAGATTATGTATAG 58.529 37.037 0.00 0.00 0.00 1.31
5188 7350 1.964933 TCGCACGGGATACAATGGATA 59.035 47.619 0.00 0.00 39.74 2.59
5211 7373 1.824852 GGCCTTTGATTTCCAACCGAT 59.175 47.619 0.00 0.00 33.85 4.18
5372 8272 9.076596 GTCTTATTGTGAGCAATTTGGAATTAC 57.923 33.333 0.00 0.00 42.19 1.89
5407 8307 2.121735 TGGTGGGGGTCCATGTGA 60.122 61.111 0.00 0.00 46.09 3.58
5427 8327 5.245751 TCATACAAAAGTACGTTGGGGACTA 59.754 40.000 14.42 1.52 0.00 2.59
5434 8334 6.592607 ACCTACCATCATACAAAAGTACGTTG 59.407 38.462 0.00 9.89 0.00 4.10
5474 8374 1.137513 GGCGTACGATTCACATAGCC 58.862 55.000 21.65 2.00 36.32 3.93
5539 8439 1.961793 TTTGTGAACAGGAGGAACCG 58.038 50.000 0.00 0.00 44.74 4.44
5561 8461 3.593442 TGGAGGGATGCGGAAAATATT 57.407 42.857 0.00 0.00 0.00 1.28
5563 8463 2.224769 GGATGGAGGGATGCGGAAAATA 60.225 50.000 0.00 0.00 0.00 1.40
5584 8484 3.190327 TGGTGCTATTTTGACCAATCGTG 59.810 43.478 0.00 0.00 36.81 4.35
5588 8488 6.154877 TCAATCATGGTGCTATTTTGACCAAT 59.845 34.615 0.00 0.00 42.96 3.16
5591 8491 5.357878 TCTCAATCATGGTGCTATTTTGACC 59.642 40.000 0.00 0.00 0.00 4.02
5618 8518 8.505625 CCCTTTTTGATCAATGTTTTAATGTGG 58.494 33.333 9.40 3.09 0.00 4.17
5639 8539 8.913487 TCTTTCGAAGATTAAAAGTACCCTTT 57.087 30.769 0.00 0.00 38.50 3.11
5681 8581 8.098286 TCATCTATTTTGAAACGGAGGAAGTAA 58.902 33.333 0.00 0.00 0.00 2.24
5685 8585 6.150474 GGTTCATCTATTTTGAAACGGAGGAA 59.850 38.462 0.00 0.00 35.03 3.36
5686 8586 5.646360 GGTTCATCTATTTTGAAACGGAGGA 59.354 40.000 0.00 0.00 35.03 3.71
5687 8587 5.414454 TGGTTCATCTATTTTGAAACGGAGG 59.586 40.000 0.00 0.00 42.47 4.30
5688 8588 6.494893 TGGTTCATCTATTTTGAAACGGAG 57.505 37.500 0.00 0.00 42.47 4.63
5689 8589 6.488683 AGTTGGTTCATCTATTTTGAAACGGA 59.511 34.615 0.00 0.00 42.47 4.69
5690 8590 6.677913 AGTTGGTTCATCTATTTTGAAACGG 58.322 36.000 0.00 0.00 42.47 4.44
5691 8591 8.574196 AAAGTTGGTTCATCTATTTTGAAACG 57.426 30.769 0.00 0.00 42.47 3.60
5712 8612 9.762381 TGGGTCATTCCAAAATTAGTATAAAGT 57.238 29.630 0.00 0.00 38.11 2.66
5715 8615 9.762381 AGTTGGGTCATTCCAAAATTAGTATAA 57.238 29.630 0.00 0.00 46.98 0.98
5716 8616 9.762381 AAGTTGGGTCATTCCAAAATTAGTATA 57.238 29.630 0.00 0.00 46.98 1.47
5717 8617 8.664669 AAGTTGGGTCATTCCAAAATTAGTAT 57.335 30.769 0.00 0.00 46.98 2.12
5718 8618 8.364142 CAAAGTTGGGTCATTCCAAAATTAGTA 58.636 33.333 0.00 0.00 46.98 1.82
5719 8619 6.994421 AAGTTGGGTCATTCCAAAATTAGT 57.006 33.333 0.00 0.00 46.98 2.24
5720 8620 7.216494 ACAAAGTTGGGTCATTCCAAAATTAG 58.784 34.615 0.00 0.00 46.98 1.73
5721 8621 7.130681 ACAAAGTTGGGTCATTCCAAAATTA 57.869 32.000 0.00 0.00 46.98 1.40
5722 8622 6.000246 ACAAAGTTGGGTCATTCCAAAATT 58.000 33.333 0.00 0.00 46.98 1.82
5723 8623 5.628797 ACAAAGTTGGGTCATTCCAAAAT 57.371 34.783 0.00 0.00 46.98 1.82
5724 8624 5.450688 CGTACAAAGTTGGGTCATTCCAAAA 60.451 40.000 0.00 0.00 46.98 2.44
5725 8625 4.036971 CGTACAAAGTTGGGTCATTCCAAA 59.963 41.667 0.00 0.00 46.98 3.28
5726 8626 3.566322 CGTACAAAGTTGGGTCATTCCAA 59.434 43.478 0.00 0.00 43.82 3.53
5727 8627 3.142951 CGTACAAAGTTGGGTCATTCCA 58.857 45.455 0.00 0.00 38.11 3.53
5728 8628 3.404899 TCGTACAAAGTTGGGTCATTCC 58.595 45.455 0.00 0.00 0.00 3.01
5729 8629 5.008316 ACTTTCGTACAAAGTTGGGTCATTC 59.992 40.000 14.04 0.00 37.18 2.67
5730 8630 4.885325 ACTTTCGTACAAAGTTGGGTCATT 59.115 37.500 14.04 0.00 37.18 2.57
5731 8631 4.457466 ACTTTCGTACAAAGTTGGGTCAT 58.543 39.130 14.04 0.00 37.18 3.06
5732 8632 3.876341 ACTTTCGTACAAAGTTGGGTCA 58.124 40.909 14.04 0.00 37.18 4.02
5733 8633 4.888038 AACTTTCGTACAAAGTTGGGTC 57.112 40.909 23.48 0.00 45.58 4.46
5734 8634 5.430886 ACTAACTTTCGTACAAAGTTGGGT 58.569 37.500 28.62 24.61 46.38 4.51
5735 8635 5.996669 ACTAACTTTCGTACAAAGTTGGG 57.003 39.130 28.62 24.26 46.38 4.12
5736 8636 7.467557 TGTACTAACTTTCGTACAAAGTTGG 57.532 36.000 27.85 27.10 46.41 3.77


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.