Multiple sequence alignment - TraesCS7B01G288800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G288800 chr7B 100.000 4244 0 0 4102 8345 524616502 524620745 0.000000e+00 7838.0
1 TraesCS7B01G288800 chr7B 100.000 3618 0 0 1 3618 524612401 524616018 0.000000e+00 6682.0
2 TraesCS7B01G288800 chr7B 93.771 1750 76 10 4102 5819 701156979 701155231 0.000000e+00 2597.0
3 TraesCS7B01G288800 chr7B 96.738 1073 33 2 4102 5173 457410847 457411918 0.000000e+00 1786.0
4 TraesCS7B01G288800 chr7B 95.104 1103 51 3 4102 5201 323204965 323203863 0.000000e+00 1735.0
5 TraesCS7B01G288800 chr7B 93.978 1096 59 5 4102 5195 501764101 501765191 0.000000e+00 1652.0
6 TraesCS7B01G288800 chr7B 93.324 689 32 7 5147 5822 457411943 457412630 0.000000e+00 1005.0
7 TraesCS7B01G288800 chr7B 91.736 363 21 5 202 560 356552319 356552676 5.820000e-136 496.0
8 TraesCS7B01G288800 chr7B 85.092 436 53 7 6998 7430 524719709 524720135 1.290000e-117 435.0
9 TraesCS7B01G288800 chr7B 74.280 486 70 32 2436 2913 52657529 52657091 4.030000e-33 154.0
10 TraesCS7B01G288800 chr7B 74.280 486 70 33 2436 2913 52678911 52678473 4.030000e-33 154.0
11 TraesCS7B01G288800 chr7B 94.737 95 3 2 2971 3064 524615464 524615371 6.750000e-31 147.0
12 TraesCS7B01G288800 chr7B 92.857 98 6 1 2971 3068 743376987 743376891 3.140000e-29 141.0
13 TraesCS7B01G288800 chr7D 94.989 2215 88 6 721 2930 496153422 496155618 0.000000e+00 3454.0
14 TraesCS7B01G288800 chr7D 95.941 1774 51 14 5818 7585 496158626 496160384 0.000000e+00 2857.0
15 TraesCS7B01G288800 chr7D 89.098 743 57 9 7624 8345 51412442 51411703 0.000000e+00 902.0
16 TraesCS7B01G288800 chr7D 94.494 563 27 3 3060 3618 496158012 496158574 0.000000e+00 865.0
17 TraesCS7B01G288800 chr7D 88.226 637 45 8 7736 8345 569044122 569043489 0.000000e+00 734.0
18 TraesCS7B01G288800 chr7D 85.446 639 67 12 1568 2205 496365790 496366403 7.060000e-180 641.0
19 TraesCS7B01G288800 chr7D 85.558 457 49 10 6998 7447 496367171 496367617 5.900000e-126 462.0
20 TraesCS7B01G288800 chr7D 89.412 170 13 3 558 727 496153295 496153459 8.490000e-50 209.0
21 TraesCS7B01G288800 chr7D 100.000 45 0 0 2925 2969 496157969 496158013 5.370000e-12 84.2
22 TraesCS7B01G288800 chr7D 100.000 39 0 0 2925 2963 496155958 496155996 1.160000e-08 73.1
23 TraesCS7B01G288800 chr2B 94.131 1738 73 11 4102 5819 263816269 263817997 0.000000e+00 2617.0
24 TraesCS7B01G288800 chr2B 93.092 1158 53 12 4680 5819 214825207 214826355 0.000000e+00 1670.0
25 TraesCS7B01G288800 chr2B 95.876 97 3 1 2969 3064 244535493 244535397 1.120000e-33 156.0
26 TraesCS7B01G288800 chr2B 92.553 94 5 2 2225 2316 166470915 166470822 5.250000e-27 134.0
27 TraesCS7B01G288800 chr7A 91.849 1828 90 12 727 2544 561799133 561800911 0.000000e+00 2495.0
28 TraesCS7B01G288800 chr7A 93.766 1139 53 5 6402 7536 561802495 561803619 0.000000e+00 1694.0
29 TraesCS7B01G288800 chr7A 89.537 669 54 13 5148 5807 726481073 726481734 0.000000e+00 833.0
30 TraesCS7B01G288800 chr7A 88.987 681 57 15 5140 5807 128902645 128901970 0.000000e+00 826.0
31 TraesCS7B01G288800 chr7A 92.804 542 34 4 5818 6357 561801956 561802494 0.000000e+00 780.0
32 TraesCS7B01G288800 chr7A 87.557 659 74 6 5154 5807 149412875 149412220 0.000000e+00 756.0
33 TraesCS7B01G288800 chr7A 93.473 429 27 1 3060 3487 561801279 561801707 3.290000e-178 636.0
34 TraesCS7B01G288800 chr7A 84.161 644 75 19 1568 2205 561880014 561880636 4.310000e-167 599.0
35 TraesCS7B01G288800 chr7A 91.688 385 19 2 2586 2969 561800908 561801280 9.600000e-144 521.0
36 TraesCS7B01G288800 chr7A 82.472 445 58 8 6998 7430 561881534 561881970 1.020000e-98 372.0
37 TraesCS7B01G288800 chr7A 89.958 239 15 2 3375 3613 561801670 561801899 4.900000e-77 300.0
38 TraesCS7B01G288800 chr7A 77.801 482 71 19 2435 2910 722828753 722828302 1.790000e-66 265.0
39 TraesCS7B01G288800 chr7A 85.520 221 31 1 2435 2654 116530615 116530835 6.520000e-56 230.0
40 TraesCS7B01G288800 chr7A 89.222 167 14 4 562 727 561799000 561799163 1.100000e-48 206.0
41 TraesCS7B01G288800 chr4B 93.196 1705 81 19 4102 5783 453250482 453248790 0.000000e+00 2473.0
42 TraesCS7B01G288800 chr4B 91.820 978 57 13 4826 5783 250730276 250729302 0.000000e+00 1341.0
43 TraesCS7B01G288800 chr4B 89.286 756 57 8 7612 8345 173178996 173178243 0.000000e+00 926.0
44 TraesCS7B01G288800 chr4B 90.528 644 36 7 4739 5358 300804372 300803730 0.000000e+00 828.0
45 TraesCS7B01G288800 chr4B 88.660 97 10 1 2220 2316 206800073 206799978 5.290000e-22 117.0
46 TraesCS7B01G288800 chr3B 91.168 1755 86 15 4103 5807 342498864 342497129 0.000000e+00 2318.0
47 TraesCS7B01G288800 chr3B 87.632 760 67 10 7612 8345 237103175 237102417 0.000000e+00 857.0
48 TraesCS7B01G288800 chr3B 87.649 753 66 8 7616 8342 733609109 733608358 0.000000e+00 850.0
49 TraesCS7B01G288800 chr3B 93.497 569 25 5 1 558 412401924 412401357 0.000000e+00 835.0
50 TraesCS7B01G288800 chr3B 92.055 365 23 3 202 560 611897737 611898101 7.470000e-140 508.0
51 TraesCS7B01G288800 chr3B 91.328 369 22 5 202 561 554049781 554050148 5.820000e-136 496.0
52 TraesCS7B01G288800 chr3B 92.405 237 17 1 7613 7849 222201017 222200782 3.730000e-88 337.0
53 TraesCS7B01G288800 chr3B 78.378 222 38 8 2642 2861 803773743 803773530 1.460000e-27 135.0
54 TraesCS7B01G288800 chr2A 95.814 1075 43 2 4103 5175 727177557 727178631 0.000000e+00 1735.0
55 TraesCS7B01G288800 chr2A 87.615 759 66 10 7612 8345 510299010 510298255 0.000000e+00 856.0
56 TraesCS7B01G288800 chr2A 87.054 757 70 14 7612 8345 105482596 105483347 0.000000e+00 830.0
57 TraesCS7B01G288800 chr2A 78.906 256 41 6 2633 2887 692742337 692742094 2.410000e-35 161.0
58 TraesCS7B01G288800 chr2A 89.362 94 7 3 2225 2316 424568725 424568633 1.900000e-21 115.0
59 TraesCS7B01G288800 chr6B 95.446 1076 47 2 4102 5175 487211472 487210397 0.000000e+00 1714.0
60 TraesCS7B01G288800 chr6B 87.384 753 68 8 7616 8343 45843211 45842461 0.000000e+00 839.0
61 TraesCS7B01G288800 chr6B 91.967 361 21 4 202 558 207719468 207719112 4.500000e-137 499.0
62 TraesCS7B01G288800 chr6B 91.758 364 23 4 202 559 494378690 494378328 4.500000e-137 499.0
63 TraesCS7B01G288800 chr6B 93.617 94 5 1 2971 3064 230468848 230468756 1.130000e-28 139.0
64 TraesCS7B01G288800 chr4A 95.251 1074 50 1 4103 5175 517889079 517888006 0.000000e+00 1700.0
65 TraesCS7B01G288800 chr4A 86.146 794 63 16 7578 8345 575039238 575040010 0.000000e+00 813.0
66 TraesCS7B01G288800 chr4A 91.304 368 23 4 202 561 481484660 481484294 2.090000e-135 494.0
67 TraesCS7B01G288800 chr4A 90.110 91 8 1 2217 2307 405575736 405575825 5.290000e-22 117.0
68 TraesCS7B01G288800 chr5B 91.169 1121 80 10 4680 5782 636987488 636988607 0.000000e+00 1504.0
69 TraesCS7B01G288800 chr5B 93.403 576 28 3 1 566 350709598 350709023 0.000000e+00 845.0
70 TraesCS7B01G288800 chr5B 91.967 361 21 5 202 558 158674452 158674808 4.500000e-137 499.0
71 TraesCS7B01G288800 chr5B 81.913 481 82 5 2434 2910 594756134 594755655 1.300000e-107 401.0
72 TraesCS7B01G288800 chr5B 87.571 354 19 6 7612 7942 389816986 389817337 3.650000e-103 387.0
73 TraesCS7B01G288800 chr5B 97.561 41 0 1 4105 4144 507808846 507808806 1.500000e-07 69.4
74 TraesCS7B01G288800 chr1B 89.727 954 72 9 4820 5748 512791526 512790574 0.000000e+00 1195.0
75 TraesCS7B01G288800 chr1B 92.379 643 35 11 5147 5784 327833740 327834373 0.000000e+00 904.0
76 TraesCS7B01G288800 chr1B 92.224 643 36 11 5147 5784 327835145 327835778 0.000000e+00 898.0
77 TraesCS7B01G288800 chr1B 82.870 216 33 4 2426 2639 563440456 563440669 3.070000e-44 191.0
78 TraesCS7B01G288800 chr1B 89.320 103 8 3 2207 2307 204455122 204455223 8.790000e-25 126.0
79 TraesCS7B01G288800 chr1D 89.432 757 54 9 7614 8345 416855584 416854829 0.000000e+00 931.0
80 TraesCS7B01G288800 chr1D 92.135 89 6 1 2225 2313 268963509 268963422 3.160000e-24 124.0
81 TraesCS7B01G288800 chr1D 88.350 103 9 3 2207 2307 194467265 194467366 4.090000e-23 121.0
82 TraesCS7B01G288800 chr4D 87.895 760 55 9 7612 8345 439772365 439773113 0.000000e+00 859.0
83 TraesCS7B01G288800 chr2D 87.385 761 64 17 7612 8345 100785235 100785990 0.000000e+00 845.0
84 TraesCS7B01G288800 chr2D 79.038 291 41 16 2432 2718 218271766 218271492 1.850000e-41 182.0
85 TraesCS7B01G288800 chr3D 89.275 662 61 5 7692 8345 560669283 560668624 0.000000e+00 821.0
86 TraesCS7B01G288800 chr3D 78.765 664 92 24 7727 8345 426936220 426936879 4.690000e-107 399.0
87 TraesCS7B01G288800 chr3D 76.960 421 75 15 2433 2836 5776846 5777261 3.920000e-53 220.0
88 TraesCS7B01G288800 chr3D 95.745 94 3 1 2971 3064 8759963 8760055 5.220000e-32 150.0
89 TraesCS7B01G288800 chrUn 78.864 440 71 13 2434 2866 153246157 153246581 2.290000e-70 278.0
90 TraesCS7B01G288800 chr5D 80.412 291 49 6 2432 2718 54720200 54719914 1.820000e-51 215.0
91 TraesCS7B01G288800 chr5D 94.681 94 2 3 2971 3064 443933799 443933889 8.730000e-30 143.0
92 TraesCS7B01G288800 chr5D 89.908 109 5 2 2971 3079 537949272 537949170 1.460000e-27 135.0
93 TraesCS7B01G288800 chr6A 94.792 96 2 1 2969 3064 19884185 19884277 6.750000e-31 147.0
94 TraesCS7B01G288800 chr6A 79.111 225 34 6 2664 2887 36967614 36967402 8.730000e-30 143.0
95 TraesCS7B01G288800 chr6A 91.262 103 5 4 2971 3072 19884277 19884178 4.060000e-28 137.0
96 TraesCS7B01G288800 chr6A 84.733 131 19 1 2588 2717 114848418 114848548 6.800000e-26 130.0
97 TraesCS7B01G288800 chr3A 77.941 204 30 9 2660 2861 32249903 32249713 6.850000e-21 113.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G288800 chr7B 524612401 524620745 8344 False 7260.000000 7838 100.000000 1 8345 2 chr7B.!!$F5 8344
1 TraesCS7B01G288800 chr7B 701155231 701156979 1748 True 2597.000000 2597 93.771000 4102 5819 1 chr7B.!!$R5 1717
2 TraesCS7B01G288800 chr7B 323203863 323204965 1102 True 1735.000000 1735 95.104000 4102 5201 1 chr7B.!!$R3 1099
3 TraesCS7B01G288800 chr7B 501764101 501765191 1090 False 1652.000000 1652 93.978000 4102 5195 1 chr7B.!!$F2 1093
4 TraesCS7B01G288800 chr7B 457410847 457412630 1783 False 1395.500000 1786 95.031000 4102 5822 2 chr7B.!!$F4 1720
5 TraesCS7B01G288800 chr7D 496153295 496160384 7089 False 1257.050000 3454 95.806000 558 7585 6 chr7D.!!$F1 7027
6 TraesCS7B01G288800 chr7D 51411703 51412442 739 True 902.000000 902 89.098000 7624 8345 1 chr7D.!!$R1 721
7 TraesCS7B01G288800 chr7D 569043489 569044122 633 True 734.000000 734 88.226000 7736 8345 1 chr7D.!!$R2 609
8 TraesCS7B01G288800 chr7D 496365790 496367617 1827 False 551.500000 641 85.502000 1568 7447 2 chr7D.!!$F2 5879
9 TraesCS7B01G288800 chr2B 263816269 263817997 1728 False 2617.000000 2617 94.131000 4102 5819 1 chr2B.!!$F2 1717
10 TraesCS7B01G288800 chr2B 214825207 214826355 1148 False 1670.000000 1670 93.092000 4680 5819 1 chr2B.!!$F1 1139
11 TraesCS7B01G288800 chr7A 561799000 561803619 4619 False 947.428571 2495 91.822857 562 7536 7 chr7A.!!$F3 6974
12 TraesCS7B01G288800 chr7A 726481073 726481734 661 False 833.000000 833 89.537000 5148 5807 1 chr7A.!!$F2 659
13 TraesCS7B01G288800 chr7A 128901970 128902645 675 True 826.000000 826 88.987000 5140 5807 1 chr7A.!!$R1 667
14 TraesCS7B01G288800 chr7A 149412220 149412875 655 True 756.000000 756 87.557000 5154 5807 1 chr7A.!!$R2 653
15 TraesCS7B01G288800 chr7A 561880014 561881970 1956 False 485.500000 599 83.316500 1568 7430 2 chr7A.!!$F4 5862
16 TraesCS7B01G288800 chr4B 453248790 453250482 1692 True 2473.000000 2473 93.196000 4102 5783 1 chr4B.!!$R5 1681
17 TraesCS7B01G288800 chr4B 250729302 250730276 974 True 1341.000000 1341 91.820000 4826 5783 1 chr4B.!!$R3 957
18 TraesCS7B01G288800 chr4B 173178243 173178996 753 True 926.000000 926 89.286000 7612 8345 1 chr4B.!!$R1 733
19 TraesCS7B01G288800 chr4B 300803730 300804372 642 True 828.000000 828 90.528000 4739 5358 1 chr4B.!!$R4 619
20 TraesCS7B01G288800 chr3B 342497129 342498864 1735 True 2318.000000 2318 91.168000 4103 5807 1 chr3B.!!$R3 1704
21 TraesCS7B01G288800 chr3B 237102417 237103175 758 True 857.000000 857 87.632000 7612 8345 1 chr3B.!!$R2 733
22 TraesCS7B01G288800 chr3B 733608358 733609109 751 True 850.000000 850 87.649000 7616 8342 1 chr3B.!!$R5 726
23 TraesCS7B01G288800 chr3B 412401357 412401924 567 True 835.000000 835 93.497000 1 558 1 chr3B.!!$R4 557
24 TraesCS7B01G288800 chr2A 727177557 727178631 1074 False 1735.000000 1735 95.814000 4103 5175 1 chr2A.!!$F2 1072
25 TraesCS7B01G288800 chr2A 510298255 510299010 755 True 856.000000 856 87.615000 7612 8345 1 chr2A.!!$R2 733
26 TraesCS7B01G288800 chr2A 105482596 105483347 751 False 830.000000 830 87.054000 7612 8345 1 chr2A.!!$F1 733
27 TraesCS7B01G288800 chr6B 487210397 487211472 1075 True 1714.000000 1714 95.446000 4102 5175 1 chr6B.!!$R4 1073
28 TraesCS7B01G288800 chr6B 45842461 45843211 750 True 839.000000 839 87.384000 7616 8343 1 chr6B.!!$R1 727
29 TraesCS7B01G288800 chr4A 517888006 517889079 1073 True 1700.000000 1700 95.251000 4103 5175 1 chr4A.!!$R2 1072
30 TraesCS7B01G288800 chr4A 575039238 575040010 772 False 813.000000 813 86.146000 7578 8345 1 chr4A.!!$F2 767
31 TraesCS7B01G288800 chr5B 636987488 636988607 1119 False 1504.000000 1504 91.169000 4680 5782 1 chr5B.!!$F3 1102
32 TraesCS7B01G288800 chr5B 350709023 350709598 575 True 845.000000 845 93.403000 1 566 1 chr5B.!!$R1 565
33 TraesCS7B01G288800 chr1B 512790574 512791526 952 True 1195.000000 1195 89.727000 4820 5748 1 chr1B.!!$R1 928
34 TraesCS7B01G288800 chr1B 327833740 327835778 2038 False 901.000000 904 92.301500 5147 5784 2 chr1B.!!$F3 637
35 TraesCS7B01G288800 chr1D 416854829 416855584 755 True 931.000000 931 89.432000 7614 8345 1 chr1D.!!$R2 731
36 TraesCS7B01G288800 chr4D 439772365 439773113 748 False 859.000000 859 87.895000 7612 8345 1 chr4D.!!$F1 733
37 TraesCS7B01G288800 chr2D 100785235 100785990 755 False 845.000000 845 87.385000 7612 8345 1 chr2D.!!$F1 733
38 TraesCS7B01G288800 chr3D 560668624 560669283 659 True 821.000000 821 89.275000 7692 8345 1 chr3D.!!$R1 653
39 TraesCS7B01G288800 chr3D 426936220 426936879 659 False 399.000000 399 78.765000 7727 8345 1 chr3D.!!$F3 618

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
905 938 0.180878 AAAACTTCACCCCGACGGAA 59.819 50.0 17.49 0.00 34.64 4.30 F
1593 1630 1.118965 AGTCCATCCGTGTGGTGACA 61.119 55.0 3.58 0.00 40.27 3.58 F
2233 2296 0.174617 CCACCACCACCAACAACAAC 59.825 55.0 0.00 0.00 0.00 3.32 F
2969 5402 0.241213 CTGCTCGTGTTCCTCTCGAA 59.759 55.0 0.00 0.00 40.61 3.71 F
4841 7585 0.101219 GAAACCGCATGCCCAAGATC 59.899 55.0 13.15 0.00 0.00 2.75 F
5065 7809 0.107017 GATGTGGACACCCTGGGATG 60.107 60.0 22.23 16.04 0.00 3.51 F
5092 7836 0.458543 CACTGATGGGAACGAGGTCG 60.459 60.0 0.00 0.00 46.33 4.79 F
5557 9784 0.885879 TCGAACCGAAGCTAGCTGAA 59.114 50.0 20.16 0.00 31.06 3.02 F
7293 11545 0.815213 AACCGACGATGATGCCATGG 60.815 55.0 7.63 7.63 35.05 3.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2220 2283 1.067283 TGCTGTTGTTGTTGTTGGTGG 60.067 47.619 0.00 0.0 0.00 4.61 R
3269 5706 1.202533 GCCACAGGACAGCGTACATAT 60.203 52.381 0.00 0.0 0.00 1.78 R
3508 6016 6.552859 TTTGTTTTGCATCTCGAAGATACA 57.447 33.333 0.00 0.0 32.12 2.29 R
4855 7599 0.173708 GCAAAGGACCTCGATCTCGT 59.826 55.000 0.00 0.0 40.80 4.18 R
6144 10383 1.129437 GATCGAGGCACAAAACTGCTC 59.871 52.381 0.00 0.0 37.33 4.26 R
6567 10809 1.133253 CGATTGCACCTTGTCTGCG 59.867 57.895 0.00 0.0 37.46 5.18 R
6625 10869 2.027561 CGGACCTGTATTGAAGGGAACA 60.028 50.000 0.00 0.0 39.30 3.18 R
7310 11562 0.816018 ACGATTCGGTTTGCACCACA 60.816 50.000 11.29 0.0 44.53 4.17 R
8155 12819 0.105039 GCGTCCGGATGAAGGAGATT 59.895 55.000 28.06 0.0 38.65 2.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
119 120 8.788806 ACAACAATCCATCGTGTTTTCTATTAA 58.211 29.630 0.00 0.00 35.81 1.40
137 138 8.000171 TCTATTAAAGGGGATTAAGCCATGAT 58.000 34.615 12.67 0.05 0.00 2.45
162 163 3.908081 CCATTGCGGGCATGGCTC 61.908 66.667 19.78 11.70 0.00 4.70
423 434 7.592885 ACTAAACCGACTGTATATACATGGT 57.407 36.000 20.55 20.55 37.55 3.55
472 483 5.666462 TCATAGCGAACATGGCTTTAGTTA 58.334 37.500 0.00 0.00 41.80 2.24
552 563 0.453282 CATTTGGCGCAACGAGTCAG 60.453 55.000 10.83 0.00 0.00 3.51
627 638 2.586425 AGGCCCACAATTAATCCATCG 58.414 47.619 0.00 0.00 0.00 3.84
634 645 6.568869 CCCACAATTAATCCATCGCTTAAAA 58.431 36.000 0.00 0.00 0.00 1.52
648 659 3.746940 GCTTAAAAGTCACAGGGTGGTA 58.253 45.455 0.00 0.00 33.87 3.25
651 662 3.876309 AAAAGTCACAGGGTGGTACAT 57.124 42.857 0.00 0.00 44.52 2.29
661 672 1.298667 GTGGTACATCAACCGGGCT 59.701 57.895 6.32 0.00 44.52 5.19
681 692 0.673644 CGTAGACAAGGCCCACAAGG 60.674 60.000 0.00 0.00 39.47 3.61
694 705 2.356432 CCCACAAGGATCATGAAGCAGA 60.356 50.000 0.00 0.00 38.24 4.26
695 706 2.943690 CCACAAGGATCATGAAGCAGAG 59.056 50.000 0.00 0.00 36.89 3.35
696 707 2.355132 CACAAGGATCATGAAGCAGAGC 59.645 50.000 0.00 0.00 0.00 4.09
697 708 2.026542 ACAAGGATCATGAAGCAGAGCA 60.027 45.455 0.00 0.00 0.00 4.26
698 709 2.614520 CAAGGATCATGAAGCAGAGCAG 59.385 50.000 0.00 0.00 0.00 4.24
699 710 0.945813 GGATCATGAAGCAGAGCAGC 59.054 55.000 0.00 0.00 0.00 5.25
700 711 1.664873 GATCATGAAGCAGAGCAGCA 58.335 50.000 0.00 0.00 36.85 4.41
701 712 1.600013 GATCATGAAGCAGAGCAGCAG 59.400 52.381 0.00 0.00 36.85 4.24
702 713 0.392595 TCATGAAGCAGAGCAGCAGG 60.393 55.000 0.00 0.00 36.85 4.85
703 714 0.392595 CATGAAGCAGAGCAGCAGGA 60.393 55.000 0.00 0.00 36.85 3.86
704 715 0.547075 ATGAAGCAGAGCAGCAGGAT 59.453 50.000 0.00 0.00 36.85 3.24
705 716 0.327259 TGAAGCAGAGCAGCAGGATT 59.673 50.000 0.00 0.00 36.85 3.01
706 717 1.271762 TGAAGCAGAGCAGCAGGATTT 60.272 47.619 0.00 0.00 36.85 2.17
707 718 1.401199 GAAGCAGAGCAGCAGGATTTC 59.599 52.381 0.00 0.00 36.85 2.17
708 719 0.619505 AGCAGAGCAGCAGGATTTCT 59.380 50.000 0.00 0.00 36.85 2.52
709 720 1.004511 AGCAGAGCAGCAGGATTTCTT 59.995 47.619 0.00 0.00 36.85 2.52
710 721 1.817447 GCAGAGCAGCAGGATTTCTTT 59.183 47.619 0.00 0.00 0.00 2.52
711 722 2.230750 GCAGAGCAGCAGGATTTCTTTT 59.769 45.455 0.00 0.00 0.00 2.27
712 723 3.441572 GCAGAGCAGCAGGATTTCTTTTA 59.558 43.478 0.00 0.00 0.00 1.52
713 724 4.673841 GCAGAGCAGCAGGATTTCTTTTAC 60.674 45.833 0.00 0.00 0.00 2.01
714 725 4.699257 CAGAGCAGCAGGATTTCTTTTACT 59.301 41.667 0.00 0.00 0.00 2.24
715 726 4.940654 AGAGCAGCAGGATTTCTTTTACTC 59.059 41.667 0.00 0.00 0.00 2.59
716 727 4.655963 AGCAGCAGGATTTCTTTTACTCA 58.344 39.130 0.00 0.00 0.00 3.41
717 728 5.072741 AGCAGCAGGATTTCTTTTACTCAA 58.927 37.500 0.00 0.00 0.00 3.02
718 729 5.536161 AGCAGCAGGATTTCTTTTACTCAAA 59.464 36.000 0.00 0.00 0.00 2.69
719 730 6.040842 AGCAGCAGGATTTCTTTTACTCAAAA 59.959 34.615 0.00 0.00 32.73 2.44
720 731 6.701400 GCAGCAGGATTTCTTTTACTCAAAAA 59.299 34.615 0.00 0.00 33.33 1.94
859 878 1.197949 GAGAAGAGAAAGCAAACCCGC 59.802 52.381 0.00 0.00 0.00 6.13
885 918 4.821589 GGCGAAGACGGGGAGCAG 62.822 72.222 0.00 0.00 40.15 4.24
886 919 3.760035 GCGAAGACGGGGAGCAGA 61.760 66.667 0.00 0.00 40.15 4.26
887 920 2.970639 CGAAGACGGGGAGCAGAA 59.029 61.111 0.00 0.00 35.72 3.02
888 921 1.292223 CGAAGACGGGGAGCAGAAA 59.708 57.895 0.00 0.00 35.72 2.52
889 922 0.320421 CGAAGACGGGGAGCAGAAAA 60.320 55.000 0.00 0.00 35.72 2.29
890 923 1.157585 GAAGACGGGGAGCAGAAAAC 58.842 55.000 0.00 0.00 0.00 2.43
891 924 0.765510 AAGACGGGGAGCAGAAAACT 59.234 50.000 0.00 0.00 0.00 2.66
892 925 0.765510 AGACGGGGAGCAGAAAACTT 59.234 50.000 0.00 0.00 0.00 2.66
905 938 0.180878 AAAACTTCACCCCGACGGAA 59.819 50.000 17.49 0.00 34.64 4.30
1239 1276 2.262915 GACAGGCTCGTGGAGGTG 59.737 66.667 0.00 0.00 0.00 4.00
1501 1538 2.264794 GTTCGGATGACAGGGCGT 59.735 61.111 0.00 0.00 0.00 5.68
1531 1568 2.606065 GGTAGCGGCGTTCACAAAAATT 60.606 45.455 9.37 0.00 0.00 1.82
1533 1570 1.202359 AGCGGCGTTCACAAAAATTGT 60.202 42.857 9.37 0.00 46.75 2.71
1572 1609 6.351711 GGGATGGAGATGTCGATGATATTCTT 60.352 42.308 0.00 0.00 0.00 2.52
1593 1630 1.118965 AGTCCATCCGTGTGGTGACA 61.119 55.000 3.58 0.00 40.27 3.58
1656 1693 6.162079 TGAGTCTGAAACTGCTAATGAGAAG 58.838 40.000 0.00 0.00 38.74 2.85
1674 1711 2.222227 AGGAAAAGGTGAGGATTGGC 57.778 50.000 0.00 0.00 0.00 4.52
1752 1789 2.356069 GGAGATGGAGAAATTTGCGGTC 59.644 50.000 0.00 0.00 0.00 4.79
2046 2092 7.953005 ATGTATCACCATGTGTTAATTTCCA 57.047 32.000 0.00 0.00 34.79 3.53
2075 2121 7.148239 GCAAAACTTGTATAGCTTGGTACAGAT 60.148 37.037 0.00 0.00 42.39 2.90
2220 2283 1.072505 CTACCACCACCACCACCAC 59.927 63.158 0.00 0.00 0.00 4.16
2223 2286 2.518349 CACCACCACCACCACCAC 60.518 66.667 0.00 0.00 0.00 4.16
2225 2288 3.814906 CCACCACCACCACCACCA 61.815 66.667 0.00 0.00 0.00 4.17
2226 2289 2.277072 CACCACCACCACCACCAA 59.723 61.111 0.00 0.00 0.00 3.67
2227 2290 2.124693 CACCACCACCACCACCAAC 61.125 63.158 0.00 0.00 0.00 3.77
2228 2291 2.277072 CCACCACCACCACCAACA 59.723 61.111 0.00 0.00 0.00 3.33
2229 2292 1.380515 CCACCACCACCACCAACAA 60.381 57.895 0.00 0.00 0.00 2.83
2230 2293 1.671901 CCACCACCACCACCAACAAC 61.672 60.000 0.00 0.00 0.00 3.32
2231 2294 0.967887 CACCACCACCACCAACAACA 60.968 55.000 0.00 0.00 0.00 3.33
2232 2295 0.251832 ACCACCACCACCAACAACAA 60.252 50.000 0.00 0.00 0.00 2.83
2233 2296 0.174617 CCACCACCACCAACAACAAC 59.825 55.000 0.00 0.00 0.00 3.32
2234 2297 0.891373 CACCACCACCAACAACAACA 59.109 50.000 0.00 0.00 0.00 3.33
2235 2298 1.273606 CACCACCACCAACAACAACAA 59.726 47.619 0.00 0.00 0.00 2.83
2236 2299 1.273886 ACCACCACCAACAACAACAAC 59.726 47.619 0.00 0.00 0.00 3.32
2237 2300 1.273606 CCACCACCAACAACAACAACA 59.726 47.619 0.00 0.00 0.00 3.33
2238 2301 2.605030 CACCACCAACAACAACAACAG 58.395 47.619 0.00 0.00 0.00 3.16
2239 2302 1.067213 ACCACCAACAACAACAACAGC 60.067 47.619 0.00 0.00 0.00 4.40
2240 2303 1.067283 CCACCAACAACAACAACAGCA 60.067 47.619 0.00 0.00 0.00 4.41
2241 2304 2.611473 CCACCAACAACAACAACAGCAA 60.611 45.455 0.00 0.00 0.00 3.91
2242 2305 3.062763 CACCAACAACAACAACAGCAAA 58.937 40.909 0.00 0.00 0.00 3.68
2243 2306 3.496130 CACCAACAACAACAACAGCAAAA 59.504 39.130 0.00 0.00 0.00 2.44
2326 2389 3.634910 TCTTGAAACAAAAGTGTAGGGGC 59.365 43.478 0.00 0.00 36.80 5.80
2494 2558 4.382040 GCTTGAGCCTAAGTGTCTATGTGA 60.382 45.833 0.00 0.00 34.31 3.58
2498 2562 5.932303 TGAGCCTAAGTGTCTATGTGAAAAC 59.068 40.000 0.00 0.00 0.00 2.43
2544 2608 7.398904 ACACAACATATAAAATAGCCCCAAACT 59.601 33.333 0.00 0.00 0.00 2.66
2546 2610 8.821817 ACAACATATAAAATAGCCCCAAACTTT 58.178 29.630 0.00 0.00 0.00 2.66
2547 2611 9.097257 CAACATATAAAATAGCCCCAAACTTTG 57.903 33.333 0.00 0.00 0.00 2.77
2718 2782 2.689983 CAGGCATCCATAGAACCAAACC 59.310 50.000 0.00 0.00 0.00 3.27
2746 2810 6.458751 CCATGTTGCCAGTAAAAGTATAGCTG 60.459 42.308 0.00 0.00 0.00 4.24
2747 2811 5.556915 TGTTGCCAGTAAAAGTATAGCTGT 58.443 37.500 0.00 0.00 0.00 4.40
2748 2812 6.001460 TGTTGCCAGTAAAAGTATAGCTGTT 58.999 36.000 0.00 0.00 0.00 3.16
2749 2813 6.148811 TGTTGCCAGTAAAAGTATAGCTGTTC 59.851 38.462 0.00 0.00 0.00 3.18
2750 2814 5.800296 TGCCAGTAAAAGTATAGCTGTTCA 58.200 37.500 0.00 0.00 0.00 3.18
2751 2815 6.234920 TGCCAGTAAAAGTATAGCTGTTCAA 58.765 36.000 0.00 0.00 0.00 2.69
2752 2816 6.712998 TGCCAGTAAAAGTATAGCTGTTCAAA 59.287 34.615 0.00 0.00 0.00 2.69
2753 2817 7.393234 TGCCAGTAAAAGTATAGCTGTTCAAAT 59.607 33.333 0.00 0.00 0.00 2.32
2754 2818 8.244113 GCCAGTAAAAGTATAGCTGTTCAAATT 58.756 33.333 0.00 0.00 0.00 1.82
2768 2844 6.369615 GCTGTTCAAATTAGCATCCAAACATT 59.630 34.615 0.00 0.00 37.40 2.71
2832 2909 8.791675 TCACATAAATTAAGTGCTGTGATTTGA 58.208 29.630 13.62 0.00 38.36 2.69
2846 2923 8.358895 TGCTGTGATTTGAGAACATATTCAAAA 58.641 29.630 4.79 0.00 43.95 2.44
2910 2987 7.425224 ACCACTAGTGTGCTATAGAAAATCT 57.575 36.000 21.18 0.00 42.54 2.40
2967 5400 0.455295 GACTGCTCGTGTTCCTCTCG 60.455 60.000 0.00 0.00 34.85 4.04
2968 5401 0.889638 ACTGCTCGTGTTCCTCTCGA 60.890 55.000 0.00 0.00 39.25 4.04
2969 5402 0.241213 CTGCTCGTGTTCCTCTCGAA 59.759 55.000 0.00 0.00 40.61 3.71
2970 5403 0.888619 TGCTCGTGTTCCTCTCGAAT 59.111 50.000 0.00 0.00 40.61 3.34
2971 5404 2.089201 TGCTCGTGTTCCTCTCGAATA 58.911 47.619 0.00 0.00 40.61 1.75
2972 5405 2.159421 TGCTCGTGTTCCTCTCGAATAC 60.159 50.000 0.00 0.00 40.61 1.89
2973 5406 2.097791 GCTCGTGTTCCTCTCGAATACT 59.902 50.000 0.00 0.00 39.70 2.12
2974 5407 3.789459 GCTCGTGTTCCTCTCGAATACTC 60.789 52.174 0.00 0.00 39.70 2.59
2975 5408 2.681848 TCGTGTTCCTCTCGAATACTCC 59.318 50.000 0.00 0.00 39.70 3.85
2976 5409 2.223525 CGTGTTCCTCTCGAATACTCCC 60.224 54.545 0.00 0.00 39.70 4.30
2977 5410 3.025262 GTGTTCCTCTCGAATACTCCCT 58.975 50.000 0.00 0.00 39.00 4.20
2978 5411 3.067040 GTGTTCCTCTCGAATACTCCCTC 59.933 52.174 0.00 0.00 39.00 4.30
2979 5412 2.624364 GTTCCTCTCGAATACTCCCTCC 59.376 54.545 0.00 0.00 31.67 4.30
2980 5413 1.850998 TCCTCTCGAATACTCCCTCCA 59.149 52.381 0.00 0.00 0.00 3.86
2981 5414 2.447429 TCCTCTCGAATACTCCCTCCAT 59.553 50.000 0.00 0.00 0.00 3.41
2982 5415 3.117093 TCCTCTCGAATACTCCCTCCATT 60.117 47.826 0.00 0.00 0.00 3.16
2983 5416 3.257127 CCTCTCGAATACTCCCTCCATTC 59.743 52.174 0.00 0.00 0.00 2.67
2984 5417 3.231818 TCTCGAATACTCCCTCCATTCC 58.768 50.000 0.00 0.00 0.00 3.01
2985 5418 2.965831 CTCGAATACTCCCTCCATTCCA 59.034 50.000 0.00 0.00 0.00 3.53
2986 5419 3.380393 TCGAATACTCCCTCCATTCCAA 58.620 45.455 0.00 0.00 0.00 3.53
2987 5420 3.778075 TCGAATACTCCCTCCATTCCAAA 59.222 43.478 0.00 0.00 0.00 3.28
2988 5421 4.412199 TCGAATACTCCCTCCATTCCAAAT 59.588 41.667 0.00 0.00 0.00 2.32
2989 5422 5.104109 TCGAATACTCCCTCCATTCCAAATT 60.104 40.000 0.00 0.00 0.00 1.82
2990 5423 6.100569 TCGAATACTCCCTCCATTCCAAATTA 59.899 38.462 0.00 0.00 0.00 1.40
2991 5424 6.204882 CGAATACTCCCTCCATTCCAAATTAC 59.795 42.308 0.00 0.00 0.00 1.89
2992 5425 6.848562 ATACTCCCTCCATTCCAAATTACT 57.151 37.500 0.00 0.00 0.00 2.24
2993 5426 5.117406 ACTCCCTCCATTCCAAATTACTC 57.883 43.478 0.00 0.00 0.00 2.59
2994 5427 4.130118 CTCCCTCCATTCCAAATTACTCG 58.870 47.826 0.00 0.00 0.00 4.18
2995 5428 3.521937 TCCCTCCATTCCAAATTACTCGT 59.478 43.478 0.00 0.00 0.00 4.18
2996 5429 3.877508 CCCTCCATTCCAAATTACTCGTC 59.122 47.826 0.00 0.00 0.00 4.20
2997 5430 3.555956 CCTCCATTCCAAATTACTCGTCG 59.444 47.826 0.00 0.00 0.00 5.12
2998 5431 4.181578 CTCCATTCCAAATTACTCGTCGT 58.818 43.478 0.00 0.00 0.00 4.34
2999 5432 3.930229 TCCATTCCAAATTACTCGTCGTG 59.070 43.478 0.00 0.00 0.00 4.35
3000 5433 3.063452 CCATTCCAAATTACTCGTCGTGG 59.937 47.826 0.00 0.00 0.00 4.94
3001 5434 3.389925 TTCCAAATTACTCGTCGTGGT 57.610 42.857 0.00 0.00 0.00 4.16
3002 5435 3.389925 TCCAAATTACTCGTCGTGGTT 57.610 42.857 0.00 0.00 0.00 3.67
3003 5436 3.731089 TCCAAATTACTCGTCGTGGTTT 58.269 40.909 0.00 0.00 0.00 3.27
3004 5437 4.128643 TCCAAATTACTCGTCGTGGTTTT 58.871 39.130 0.00 0.00 0.00 2.43
3005 5438 5.295950 TCCAAATTACTCGTCGTGGTTTTA 58.704 37.500 0.00 0.00 0.00 1.52
3006 5439 5.406175 TCCAAATTACTCGTCGTGGTTTTAG 59.594 40.000 0.00 0.00 0.00 1.85
3007 5440 5.178067 CCAAATTACTCGTCGTGGTTTTAGT 59.822 40.000 0.00 0.00 0.00 2.24
3008 5441 6.293027 CCAAATTACTCGTCGTGGTTTTAGTT 60.293 38.462 0.00 0.00 0.00 2.24
3009 5442 6.457851 AATTACTCGTCGTGGTTTTAGTTC 57.542 37.500 0.00 0.00 0.00 3.01
3010 5443 3.441496 ACTCGTCGTGGTTTTAGTTCA 57.559 42.857 0.00 0.00 0.00 3.18
3011 5444 3.784338 ACTCGTCGTGGTTTTAGTTCAA 58.216 40.909 0.00 0.00 0.00 2.69
3012 5445 4.183101 ACTCGTCGTGGTTTTAGTTCAAA 58.817 39.130 0.00 0.00 0.00 2.69
3013 5446 4.812626 ACTCGTCGTGGTTTTAGTTCAAAT 59.187 37.500 0.00 0.00 0.00 2.32
3014 5447 5.295045 ACTCGTCGTGGTTTTAGTTCAAATT 59.705 36.000 0.00 0.00 0.00 1.82
3015 5448 6.121613 TCGTCGTGGTTTTAGTTCAAATTT 57.878 33.333 0.00 0.00 0.00 1.82
3016 5449 5.966503 TCGTCGTGGTTTTAGTTCAAATTTG 59.033 36.000 12.15 12.15 0.00 2.32
3017 5450 5.966503 CGTCGTGGTTTTAGTTCAAATTTGA 59.033 36.000 16.91 16.91 34.92 2.69
3018 5451 6.469595 CGTCGTGGTTTTAGTTCAAATTTGAA 59.530 34.615 26.01 26.01 44.31 2.69
3037 5470 9.458374 AATTTGAACTATTGAACTAAAACCACG 57.542 29.630 0.00 0.00 0.00 4.94
3038 5471 7.789273 TTGAACTATTGAACTAAAACCACGA 57.211 32.000 0.00 0.00 0.00 4.35
3039 5472 7.181143 TGAACTATTGAACTAAAACCACGAC 57.819 36.000 0.00 0.00 0.00 4.34
3040 5473 5.834239 ACTATTGAACTAAAACCACGACG 57.166 39.130 0.00 0.00 0.00 5.12
3041 5474 5.531634 ACTATTGAACTAAAACCACGACGA 58.468 37.500 0.00 0.00 0.00 4.20
3042 5475 4.985044 ATTGAACTAAAACCACGACGAG 57.015 40.909 0.00 0.00 0.00 4.18
3043 5476 3.441496 TGAACTAAAACCACGACGAGT 57.559 42.857 0.00 0.00 0.00 4.18
3044 5477 4.566545 TGAACTAAAACCACGACGAGTA 57.433 40.909 0.00 0.00 0.00 2.59
3045 5478 4.930963 TGAACTAAAACCACGACGAGTAA 58.069 39.130 0.00 0.00 0.00 2.24
3046 5479 5.531634 TGAACTAAAACCACGACGAGTAAT 58.468 37.500 0.00 0.00 0.00 1.89
3047 5480 5.984926 TGAACTAAAACCACGACGAGTAATT 59.015 36.000 0.00 1.08 0.00 1.40
3048 5481 6.479660 TGAACTAAAACCACGACGAGTAATTT 59.520 34.615 0.00 0.34 0.00 1.82
3049 5482 6.219302 ACTAAAACCACGACGAGTAATTTG 57.781 37.500 0.00 2.39 0.00 2.32
3050 5483 4.477302 AAAACCACGACGAGTAATTTGG 57.523 40.909 0.00 0.00 0.00 3.28
3051 5484 3.389925 AACCACGACGAGTAATTTGGA 57.610 42.857 0.00 0.00 0.00 3.53
3052 5485 3.389925 ACCACGACGAGTAATTTGGAA 57.610 42.857 0.00 0.00 0.00 3.53
3053 5486 3.934068 ACCACGACGAGTAATTTGGAAT 58.066 40.909 0.00 0.00 0.00 3.01
3054 5487 3.682858 ACCACGACGAGTAATTTGGAATG 59.317 43.478 0.00 0.00 0.00 2.67
3055 5488 3.063452 CCACGACGAGTAATTTGGAATGG 59.937 47.826 0.00 0.00 0.00 3.16
3056 5489 3.930229 CACGACGAGTAATTTGGAATGGA 59.070 43.478 0.00 0.00 0.00 3.41
3057 5490 4.032900 CACGACGAGTAATTTGGAATGGAG 59.967 45.833 0.00 0.00 0.00 3.86
3058 5491 3.555956 CGACGAGTAATTTGGAATGGAGG 59.444 47.826 0.00 0.00 0.00 4.30
3107 5541 2.073232 AGCCCATGACTGCTGAACT 58.927 52.632 0.00 0.00 36.23 3.01
3108 5542 1.279496 AGCCCATGACTGCTGAACTA 58.721 50.000 0.00 0.00 36.23 2.24
3109 5543 1.065854 AGCCCATGACTGCTGAACTAC 60.066 52.381 0.00 0.00 36.23 2.73
3110 5544 1.645034 CCCATGACTGCTGAACTACG 58.355 55.000 0.00 0.00 0.00 3.51
3112 5546 1.002366 CATGACTGCTGAACTACGCC 58.998 55.000 0.00 0.00 0.00 5.68
3113 5547 0.898320 ATGACTGCTGAACTACGCCT 59.102 50.000 0.00 0.00 0.00 5.52
3193 5629 1.590591 TGCTTGGTAGGAGCCCATTA 58.409 50.000 0.00 0.00 39.38 1.90
3226 5663 0.899019 TACATTGACTGCTGCCCGTA 59.101 50.000 0.00 0.00 0.00 4.02
3257 5694 1.024579 ACGCAGTAGAATTTGCCCCG 61.025 55.000 0.00 0.00 41.94 5.73
3269 5706 1.982660 TTGCCCCGTTGTTTATCACA 58.017 45.000 0.00 0.00 0.00 3.58
3383 5820 7.823745 AATTACCATGATCACCATCTTAACC 57.176 36.000 0.00 0.00 31.94 2.85
3431 5868 5.228945 ACTAGTTTGTAACATGGTCAGCT 57.771 39.130 0.00 0.00 0.00 4.24
3432 5869 5.238583 ACTAGTTTGTAACATGGTCAGCTC 58.761 41.667 0.00 0.00 0.00 4.09
3562 6291 3.270027 TGTGCAGGTATGTGATGCTAAC 58.730 45.455 0.00 0.00 40.62 2.34
3604 6333 7.509141 TGTTTGATCTTCTGTTAGCAATTCA 57.491 32.000 0.00 0.00 0.00 2.57
4371 7112 1.577468 TGACTCGACGCAACACAAAT 58.423 45.000 0.00 0.00 0.00 2.32
4837 7581 2.994417 GGGAAACCGCATGCCCAA 60.994 61.111 13.15 0.00 43.64 4.12
4838 7582 2.573340 GGAAACCGCATGCCCAAG 59.427 61.111 13.15 0.82 0.00 3.61
4839 7583 1.976474 GGAAACCGCATGCCCAAGA 60.976 57.895 13.15 0.00 0.00 3.02
4840 7584 1.322538 GGAAACCGCATGCCCAAGAT 61.323 55.000 13.15 0.00 0.00 2.40
4841 7585 0.101219 GAAACCGCATGCCCAAGATC 59.899 55.000 13.15 0.00 0.00 2.75
4842 7586 1.322538 AAACCGCATGCCCAAGATCC 61.323 55.000 13.15 0.00 0.00 3.36
4843 7587 2.908940 CCGCATGCCCAAGATCCC 60.909 66.667 13.15 0.00 0.00 3.85
4844 7588 2.908940 CGCATGCCCAAGATCCCC 60.909 66.667 13.15 0.00 0.00 4.81
4845 7589 2.908940 GCATGCCCAAGATCCCCG 60.909 66.667 6.36 0.00 0.00 5.73
4846 7590 2.918248 CATGCCCAAGATCCCCGA 59.082 61.111 0.00 0.00 0.00 5.14
4847 7591 1.526917 CATGCCCAAGATCCCCGAC 60.527 63.158 0.00 0.00 0.00 4.79
4848 7592 3.106986 ATGCCCAAGATCCCCGACG 62.107 63.158 0.00 0.00 0.00 5.12
4850 7594 3.781307 CCCAAGATCCCCGACGCA 61.781 66.667 0.00 0.00 0.00 5.24
4851 7595 2.202932 CCAAGATCCCCGACGCAG 60.203 66.667 0.00 0.00 0.00 5.18
4852 7596 2.892425 CAAGATCCCCGACGCAGC 60.892 66.667 0.00 0.00 0.00 5.25
4853 7597 4.514577 AAGATCCCCGACGCAGCG 62.515 66.667 14.82 14.82 0.00 5.18
4861 7605 4.538283 CGACGCAGCGGACGAGAT 62.538 66.667 24.92 1.14 34.33 2.75
4862 7606 2.652496 GACGCAGCGGACGAGATC 60.652 66.667 21.15 1.14 0.00 2.75
4863 7607 4.538283 ACGCAGCGGACGAGATCG 62.538 66.667 21.15 0.00 46.33 3.69
4864 7608 4.237809 CGCAGCGGACGAGATCGA 62.238 66.667 7.00 0.00 43.02 3.59
4865 7609 2.352915 GCAGCGGACGAGATCGAG 60.353 66.667 9.58 1.41 43.02 4.04
4866 7610 2.329690 CAGCGGACGAGATCGAGG 59.670 66.667 9.58 0.00 43.02 4.63
4867 7611 2.124653 AGCGGACGAGATCGAGGT 60.125 61.111 9.58 2.98 43.02 3.85
4868 7612 2.181521 AGCGGACGAGATCGAGGTC 61.182 63.158 9.58 5.58 43.02 3.85
4869 7613 3.023950 CGGACGAGATCGAGGTCC 58.976 66.667 17.71 17.71 45.34 4.46
4870 7614 1.524165 CGGACGAGATCGAGGTCCT 60.524 63.158 22.18 0.00 46.35 3.85
4871 7615 1.096386 CGGACGAGATCGAGGTCCTT 61.096 60.000 22.18 0.00 46.35 3.36
4872 7616 1.104630 GGACGAGATCGAGGTCCTTT 58.895 55.000 19.41 0.00 45.34 3.11
4873 7617 1.202313 GGACGAGATCGAGGTCCTTTG 60.202 57.143 19.41 0.00 45.34 2.77
4874 7618 0.173708 ACGAGATCGAGGTCCTTTGC 59.826 55.000 9.58 0.00 43.02 3.68
4875 7619 0.867753 CGAGATCGAGGTCCTTTGCG 60.868 60.000 0.00 0.00 43.02 4.85
4876 7620 1.148759 GAGATCGAGGTCCTTTGCGC 61.149 60.000 0.00 0.00 0.00 6.09
4877 7621 1.447838 GATCGAGGTCCTTTGCGCA 60.448 57.895 5.66 5.66 0.00 6.09
4878 7622 1.424493 GATCGAGGTCCTTTGCGCAG 61.424 60.000 11.31 0.00 0.00 5.18
4897 7641 3.914984 CGAAGAGCAACTTGGAGGA 57.085 52.632 1.06 0.00 39.13 3.71
4898 7642 1.719600 CGAAGAGCAACTTGGAGGAG 58.280 55.000 1.06 0.00 39.13 3.69
4899 7643 1.447945 GAAGAGCAACTTGGAGGAGC 58.552 55.000 1.06 0.00 39.13 4.70
4900 7644 0.321122 AAGAGCAACTTGGAGGAGCG 60.321 55.000 0.00 0.00 37.45 5.03
4901 7645 1.743252 GAGCAACTTGGAGGAGCGG 60.743 63.158 0.00 0.00 0.00 5.52
4902 7646 3.435186 GCAACTTGGAGGAGCGGC 61.435 66.667 0.00 0.00 0.00 6.53
4903 7647 2.032528 CAACTTGGAGGAGCGGCA 59.967 61.111 1.45 0.00 0.00 5.69
4904 7648 2.037136 CAACTTGGAGGAGCGGCAG 61.037 63.158 1.45 0.00 0.00 4.85
4905 7649 3.909086 AACTTGGAGGAGCGGCAGC 62.909 63.158 0.00 0.00 45.58 5.25
4919 7663 2.745100 CAGCTGCAGACCACGCAT 60.745 61.111 20.43 0.00 39.02 4.73
4920 7664 2.435586 AGCTGCAGACCACGCATC 60.436 61.111 20.43 0.00 39.02 3.91
4921 7665 2.435586 GCTGCAGACCACGCATCT 60.436 61.111 20.43 0.00 39.02 2.90
4922 7666 2.459442 GCTGCAGACCACGCATCTC 61.459 63.158 20.43 0.00 39.02 2.75
4923 7667 1.812922 CTGCAGACCACGCATCTCC 60.813 63.158 8.42 0.00 39.02 3.71
4924 7668 2.236223 CTGCAGACCACGCATCTCCT 62.236 60.000 8.42 0.00 39.02 3.69
4925 7669 1.812922 GCAGACCACGCATCTCCTG 60.813 63.158 0.00 0.00 0.00 3.86
4934 7678 3.190849 CATCTCCTGCACACGCCG 61.191 66.667 0.00 0.00 37.32 6.46
4935 7679 3.381983 ATCTCCTGCACACGCCGA 61.382 61.111 0.00 0.00 37.32 5.54
4936 7680 3.649277 ATCTCCTGCACACGCCGAC 62.649 63.158 0.00 0.00 37.32 4.79
4997 7741 4.047059 CGACACGTGGCGGGTAGT 62.047 66.667 35.70 2.75 46.20 2.73
4998 7742 2.431942 GACACGTGGCGGGTAGTG 60.432 66.667 21.57 0.00 46.20 2.74
4999 7743 2.913578 ACACGTGGCGGGTAGTGA 60.914 61.111 21.57 0.00 43.62 3.41
5000 7744 2.221906 GACACGTGGCGGGTAGTGAT 62.222 60.000 21.57 0.00 46.20 3.06
5001 7745 1.518572 CACGTGGCGGGTAGTGATC 60.519 63.158 7.95 0.00 36.79 2.92
5002 7746 2.106332 CGTGGCGGGTAGTGATCC 59.894 66.667 0.00 0.00 0.00 3.36
5003 7747 2.717044 CGTGGCGGGTAGTGATCCA 61.717 63.158 0.00 0.00 0.00 3.41
5004 7748 1.600107 GTGGCGGGTAGTGATCCAA 59.400 57.895 0.00 0.00 0.00 3.53
5005 7749 0.462047 GTGGCGGGTAGTGATCCAAG 60.462 60.000 0.00 0.00 0.00 3.61
5006 7750 0.616395 TGGCGGGTAGTGATCCAAGA 60.616 55.000 0.00 0.00 0.00 3.02
5007 7751 0.179081 GGCGGGTAGTGATCCAAGAC 60.179 60.000 0.00 0.00 0.00 3.01
5008 7752 0.527817 GCGGGTAGTGATCCAAGACG 60.528 60.000 0.00 0.00 0.00 4.18
5009 7753 1.100510 CGGGTAGTGATCCAAGACGA 58.899 55.000 0.00 0.00 0.00 4.20
5010 7754 1.475280 CGGGTAGTGATCCAAGACGAA 59.525 52.381 0.00 0.00 0.00 3.85
5011 7755 2.094390 CGGGTAGTGATCCAAGACGAAA 60.094 50.000 0.00 0.00 0.00 3.46
5012 7756 3.522553 GGGTAGTGATCCAAGACGAAAG 58.477 50.000 0.00 0.00 0.00 2.62
5013 7757 2.930682 GGTAGTGATCCAAGACGAAAGC 59.069 50.000 0.00 0.00 0.00 3.51
5014 7758 1.714794 AGTGATCCAAGACGAAAGCG 58.285 50.000 0.00 0.00 44.79 4.68
5015 7759 0.721718 GTGATCCAAGACGAAAGCGG 59.278 55.000 0.00 0.00 43.17 5.52
5016 7760 0.320374 TGATCCAAGACGAAAGCGGT 59.680 50.000 0.00 0.00 43.17 5.68
5017 7761 0.721718 GATCCAAGACGAAAGCGGTG 59.278 55.000 0.00 0.00 43.17 4.94
5018 7762 0.320374 ATCCAAGACGAAAGCGGTGA 59.680 50.000 0.00 0.00 43.17 4.02
5019 7763 0.599204 TCCAAGACGAAAGCGGTGAC 60.599 55.000 0.00 0.00 43.17 3.67
5039 7783 4.143333 CGACGGCGGGGACTTGAT 62.143 66.667 13.24 0.00 0.00 2.57
5040 7784 2.202892 GACGGCGGGGACTTGATC 60.203 66.667 13.24 0.00 0.00 2.92
5041 7785 2.683933 ACGGCGGGGACTTGATCT 60.684 61.111 13.24 0.00 0.00 2.75
5042 7786 2.202932 CGGCGGGGACTTGATCTG 60.203 66.667 0.00 0.00 0.00 2.90
5043 7787 2.514824 GGCGGGGACTTGATCTGC 60.515 66.667 0.00 0.00 0.00 4.26
5044 7788 2.586792 GCGGGGACTTGATCTGCT 59.413 61.111 0.00 0.00 0.00 4.24
5045 7789 1.817099 GCGGGGACTTGATCTGCTG 60.817 63.158 0.00 0.00 0.00 4.41
5046 7790 1.153289 CGGGGACTTGATCTGCTGG 60.153 63.158 0.00 0.00 0.00 4.85
5047 7791 1.617018 CGGGGACTTGATCTGCTGGA 61.617 60.000 0.00 0.00 0.00 3.86
5048 7792 0.842635 GGGGACTTGATCTGCTGGAT 59.157 55.000 0.00 0.00 37.37 3.41
5049 7793 1.476471 GGGGACTTGATCTGCTGGATG 60.476 57.143 0.00 0.00 34.33 3.51
5050 7794 1.211457 GGGACTTGATCTGCTGGATGT 59.789 52.381 0.00 0.00 34.33 3.06
5051 7795 2.286872 GGACTTGATCTGCTGGATGTG 58.713 52.381 0.00 0.00 34.33 3.21
5052 7796 2.286872 GACTTGATCTGCTGGATGTGG 58.713 52.381 0.00 0.00 34.33 4.17
5053 7797 1.911357 ACTTGATCTGCTGGATGTGGA 59.089 47.619 0.00 0.00 34.33 4.02
5054 7798 2.286872 CTTGATCTGCTGGATGTGGAC 58.713 52.381 0.00 0.00 34.33 4.02
5055 7799 1.278537 TGATCTGCTGGATGTGGACA 58.721 50.000 0.00 0.00 34.33 4.02
5056 7800 1.065926 TGATCTGCTGGATGTGGACAC 60.066 52.381 0.00 0.00 34.33 3.67
5057 7801 0.254178 ATCTGCTGGATGTGGACACC 59.746 55.000 0.00 0.00 32.69 4.16
5058 7802 1.377725 CTGCTGGATGTGGACACCC 60.378 63.158 0.00 0.00 0.00 4.61
5059 7803 1.845627 CTGCTGGATGTGGACACCCT 61.846 60.000 0.00 0.00 0.00 4.34
5060 7804 1.377725 GCTGGATGTGGACACCCTG 60.378 63.158 0.00 0.00 0.00 4.45
5061 7805 1.300963 CTGGATGTGGACACCCTGG 59.699 63.158 0.00 0.00 0.00 4.45
5062 7806 2.202236 CTGGATGTGGACACCCTGGG 62.202 65.000 12.28 12.28 0.00 4.45
5063 7807 1.923395 GGATGTGGACACCCTGGGA 60.923 63.158 22.23 0.00 0.00 4.37
5064 7808 1.281925 GGATGTGGACACCCTGGGAT 61.282 60.000 22.23 6.88 0.00 3.85
5065 7809 0.107017 GATGTGGACACCCTGGGATG 60.107 60.000 22.23 16.04 0.00 3.51
5066 7810 0.549902 ATGTGGACACCCTGGGATGA 60.550 55.000 22.23 0.00 0.00 2.92
5067 7811 1.299976 GTGGACACCCTGGGATGAC 59.700 63.158 22.23 13.55 0.00 3.06
5068 7812 2.290287 TGGACACCCTGGGATGACG 61.290 63.158 22.23 4.58 0.00 4.35
5069 7813 2.584608 GACACCCTGGGATGACGG 59.415 66.667 22.23 3.86 0.00 4.79
5070 7814 3.682292 GACACCCTGGGATGACGGC 62.682 68.421 22.23 0.00 0.00 5.68
5071 7815 4.838152 CACCCTGGGATGACGGCG 62.838 72.222 22.23 4.80 0.00 6.46
5078 7822 4.451150 GGATGACGGCGGCACTGA 62.451 66.667 22.09 0.00 0.00 3.41
5079 7823 2.202932 GATGACGGCGGCACTGAT 60.203 61.111 22.09 0.00 0.00 2.90
5080 7824 2.512286 ATGACGGCGGCACTGATG 60.512 61.111 22.09 0.00 0.00 3.07
5081 7825 4.758251 TGACGGCGGCACTGATGG 62.758 66.667 13.60 0.00 0.00 3.51
5084 7828 4.776322 CGGCGGCACTGATGGGAA 62.776 66.667 10.53 0.00 0.00 3.97
5085 7829 3.134127 GGCGGCACTGATGGGAAC 61.134 66.667 3.07 0.00 0.00 3.62
5086 7830 3.499737 GCGGCACTGATGGGAACG 61.500 66.667 0.00 0.00 0.00 3.95
5087 7831 2.264480 CGGCACTGATGGGAACGA 59.736 61.111 0.00 0.00 0.00 3.85
5088 7832 1.811266 CGGCACTGATGGGAACGAG 60.811 63.158 0.00 0.00 0.00 4.18
5089 7833 1.450312 GGCACTGATGGGAACGAGG 60.450 63.158 0.00 0.00 0.00 4.63
5090 7834 1.296715 GCACTGATGGGAACGAGGT 59.703 57.895 0.00 0.00 0.00 3.85
5091 7835 0.741221 GCACTGATGGGAACGAGGTC 60.741 60.000 0.00 0.00 0.00 3.85
5092 7836 0.458543 CACTGATGGGAACGAGGTCG 60.459 60.000 0.00 0.00 46.33 4.79
5102 7846 4.477975 CGAGGTCGTCGCACTCCC 62.478 72.222 1.48 0.00 43.03 4.30
5103 7847 4.477975 GAGGTCGTCGCACTCCCG 62.478 72.222 5.11 0.00 0.00 5.14
5105 7849 4.773117 GGTCGTCGCACTCCCGTC 62.773 72.222 0.00 0.00 0.00 4.79
5108 7852 3.792047 CGTCGCACTCCCGTCGTA 61.792 66.667 0.00 0.00 35.63 3.43
5109 7853 2.099831 GTCGCACTCCCGTCGTAG 59.900 66.667 0.00 0.00 0.00 3.51
5110 7854 3.129502 TCGCACTCCCGTCGTAGG 61.130 66.667 0.00 0.00 0.00 3.18
5117 7861 3.925090 CCCGTCGTAGGGCATCCC 61.925 72.222 5.11 0.00 45.72 3.85
5133 7877 2.417516 CCATACTGGGCGACGGAG 59.582 66.667 0.00 0.00 32.67 4.63
5134 7878 2.279517 CATACTGGGCGACGGAGC 60.280 66.667 0.00 0.00 0.00 4.70
5135 7879 2.442272 ATACTGGGCGACGGAGCT 60.442 61.111 0.00 0.00 37.29 4.09
5136 7880 2.786495 ATACTGGGCGACGGAGCTG 61.786 63.158 0.00 0.00 37.29 4.24
5137 7881 3.931190 TACTGGGCGACGGAGCTGA 62.931 63.158 0.00 0.00 37.29 4.26
5138 7882 4.803426 CTGGGCGACGGAGCTGAC 62.803 72.222 0.00 0.00 37.29 3.51
5557 9784 0.885879 TCGAACCGAAGCTAGCTGAA 59.114 50.000 20.16 0.00 31.06 3.02
5987 10218 2.838202 GTGAGGGGATTTGGTGAGACTA 59.162 50.000 0.00 0.00 0.00 2.59
6144 10383 6.106648 TCAATATACTGCTCTCCTGAATGG 57.893 41.667 0.00 0.00 37.10 3.16
6286 10528 5.966742 AATTCCAGTTCTTGCTACTTTCC 57.033 39.130 0.00 0.00 0.00 3.13
6376 10618 5.046014 ACATTTGAGCTGGAACATCTACTCT 60.046 40.000 0.00 0.00 33.65 3.24
6377 10619 5.489792 TTTGAGCTGGAACATCTACTCTT 57.510 39.130 0.00 0.00 33.65 2.85
6378 10620 6.605471 TTTGAGCTGGAACATCTACTCTTA 57.395 37.500 0.00 0.00 33.65 2.10
6379 10621 6.605471 TTGAGCTGGAACATCTACTCTTAA 57.395 37.500 0.00 0.00 33.65 1.85
6432 10674 1.212751 GCATTGTCCGTTGCCTTCC 59.787 57.895 0.00 0.00 32.66 3.46
6543 10785 4.326826 TGGTCATTTAGCTTGACAAGAGG 58.673 43.478 19.51 0.00 44.22 3.69
6584 10828 1.394917 CTACGCAGACAAGGTGCAATC 59.605 52.381 0.00 0.00 41.26 2.67
6625 10869 4.367039 TGCTTGTTAGGTTCTAGGCTTT 57.633 40.909 0.00 0.00 0.00 3.51
6908 11152 4.953579 TGTAGGATTAAAAATCAGGCCACC 59.046 41.667 5.01 0.00 0.00 4.61
6910 11154 3.103742 GGATTAAAAATCAGGCCACCCA 58.896 45.455 5.01 0.00 0.00 4.51
7222 11474 5.118664 CCAACTGATGTCACTTACAGTTACG 59.881 44.000 0.00 0.00 46.94 3.18
7246 11498 1.398595 CGCGGCAGTGAAAAGAAAAG 58.601 50.000 0.00 0.00 0.00 2.27
7293 11545 0.815213 AACCGACGATGATGCCATGG 60.815 55.000 7.63 7.63 35.05 3.66
7310 11562 2.666812 GTCCCGGGTCCGTGATTT 59.333 61.111 22.86 0.00 37.81 2.17
7353 11606 7.307751 CGTGAATTGTTGTTACCTTAGATGTGT 60.308 37.037 0.00 0.00 0.00 3.72
7371 11624 2.213131 GTGTTGTGTCGAAATTGCAACG 59.787 45.455 0.00 0.48 41.38 4.10
7405 11663 6.058827 TGTTGTATCTTGATTGTGTGTGTG 57.941 37.500 0.00 0.00 0.00 3.82
7518 11777 2.546368 CGCTGTTTTAACTGTGGTGCTA 59.454 45.455 5.47 0.00 35.53 3.49
7734 12050 5.968387 ACGGAGATGTAAATAAAAGAGCG 57.032 39.130 0.00 0.00 0.00 5.03
7929 12343 3.083997 CCCCTCGTCCTCCTTGGG 61.084 72.222 0.00 0.00 37.68 4.12
8022 12684 1.155424 TTCTTTTGCGCCTCGACGTT 61.155 50.000 4.18 0.00 34.88 3.99
8126 12788 4.351938 CGGGAGCGACGACAACCA 62.352 66.667 0.00 0.00 0.00 3.67
8153 12817 1.691976 TCTTCTTCGCCTTCTTCACCA 59.308 47.619 0.00 0.00 0.00 4.17
8155 12819 1.338107 TCTTCGCCTTCTTCACCAGA 58.662 50.000 0.00 0.00 0.00 3.86
8172 12836 2.224161 CCAGAATCTCCTTCATCCGGAC 60.224 54.545 6.12 0.00 36.24 4.79
8235 12899 0.828762 TCCGGGAAGTTGAGGTTCGA 60.829 55.000 0.00 0.00 0.00 3.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
145 146 2.963928 TAGAGCCATGCCCGCAATGG 62.964 60.000 11.52 11.52 38.45 3.16
199 200 7.707035 GCATACCCCTCTCTTATTATGATTACG 59.293 40.741 0.00 0.00 0.00 3.18
453 464 4.156008 CCTTTAACTAAAGCCATGTTCGCT 59.844 41.667 4.03 0.00 40.93 4.93
472 483 3.385755 AGTTTCATGCTGCAAGAACCTTT 59.614 39.130 18.66 3.74 34.07 3.11
547 558 5.047943 CGGGCATAAACTATACTAGCTGACT 60.048 44.000 0.00 0.00 0.00 3.41
552 563 5.048224 TCACTCGGGCATAAACTATACTAGC 60.048 44.000 0.00 0.00 0.00 3.42
627 638 2.583143 ACCACCCTGTGACTTTTAAGC 58.417 47.619 0.00 0.00 35.23 3.09
634 645 2.024176 TGATGTACCACCCTGTGACT 57.976 50.000 0.00 0.00 35.23 3.41
648 659 0.968901 TCTACGAGCCCGGTTGATGT 60.969 55.000 0.00 0.00 40.78 3.06
651 662 1.180456 TTGTCTACGAGCCCGGTTGA 61.180 55.000 0.00 0.00 40.78 3.18
661 672 0.320374 CTTGTGGGCCTTGTCTACGA 59.680 55.000 4.53 0.00 0.00 3.43
681 692 1.600013 CTGCTGCTCTGCTTCATGATC 59.400 52.381 0.00 0.00 0.00 2.92
694 705 4.655963 TGAGTAAAAGAAATCCTGCTGCT 58.344 39.130 0.00 0.00 0.00 4.24
695 706 5.376854 TTGAGTAAAAGAAATCCTGCTGC 57.623 39.130 0.00 0.00 0.00 5.25
717 728 5.922053 AGAAATCCTGCTGCTTTTCTTTTT 58.078 33.333 0.00 0.00 35.46 1.94
718 729 5.069516 TGAGAAATCCTGCTGCTTTTCTTTT 59.930 36.000 15.28 4.61 38.25 2.27
719 730 4.586001 TGAGAAATCCTGCTGCTTTTCTTT 59.414 37.500 15.28 5.27 38.25 2.52
720 731 4.147321 TGAGAAATCCTGCTGCTTTTCTT 58.853 39.130 15.28 1.03 38.25 2.52
721 732 3.759581 TGAGAAATCCTGCTGCTTTTCT 58.240 40.909 14.54 14.54 40.22 2.52
722 733 4.510038 TTGAGAAATCCTGCTGCTTTTC 57.490 40.909 0.00 5.66 0.00 2.29
723 734 4.942761 TTTGAGAAATCCTGCTGCTTTT 57.057 36.364 0.00 0.00 0.00 2.27
724 735 4.525487 TGATTTGAGAAATCCTGCTGCTTT 59.475 37.500 0.00 0.00 45.23 3.51
725 736 4.084287 TGATTTGAGAAATCCTGCTGCTT 58.916 39.130 0.00 0.00 45.23 3.91
757 770 3.747529 CGCTTTGAGCCAAATTTCCAATT 59.252 39.130 1.56 0.00 38.18 2.32
758 771 3.006752 TCGCTTTGAGCCAAATTTCCAAT 59.993 39.130 1.56 0.00 38.18 3.16
759 772 2.363680 TCGCTTTGAGCCAAATTTCCAA 59.636 40.909 1.56 0.00 38.18 3.53
769 782 2.288152 TGATTGGTTTTCGCTTTGAGCC 60.288 45.455 0.00 0.00 38.18 4.70
864 897 1.741770 CTCCCCGTCTTCGCCTTTG 60.742 63.158 0.00 0.00 35.54 2.77
865 898 2.663196 CTCCCCGTCTTCGCCTTT 59.337 61.111 0.00 0.00 35.54 3.11
866 899 4.083862 GCTCCCCGTCTTCGCCTT 62.084 66.667 0.00 0.00 35.54 4.35
868 901 4.821589 CTGCTCCCCGTCTTCGCC 62.822 72.222 0.00 0.00 35.54 5.54
869 902 2.781595 TTTCTGCTCCCCGTCTTCGC 62.782 60.000 0.00 0.00 35.54 4.70
870 903 0.320421 TTTTCTGCTCCCCGTCTTCG 60.320 55.000 0.00 0.00 0.00 3.79
871 904 1.157585 GTTTTCTGCTCCCCGTCTTC 58.842 55.000 0.00 0.00 0.00 2.87
872 905 0.765510 AGTTTTCTGCTCCCCGTCTT 59.234 50.000 0.00 0.00 0.00 3.01
873 906 0.765510 AAGTTTTCTGCTCCCCGTCT 59.234 50.000 0.00 0.00 0.00 4.18
874 907 1.157585 GAAGTTTTCTGCTCCCCGTC 58.842 55.000 0.00 0.00 0.00 4.79
875 908 0.472471 TGAAGTTTTCTGCTCCCCGT 59.528 50.000 0.00 0.00 0.00 5.28
876 909 0.875059 GTGAAGTTTTCTGCTCCCCG 59.125 55.000 0.00 0.00 0.00 5.73
877 910 1.248486 GGTGAAGTTTTCTGCTCCCC 58.752 55.000 0.00 0.00 34.03 4.81
879 912 1.248486 GGGGTGAAGTTTTCTGCTCC 58.752 55.000 0.00 0.00 38.16 4.70
880 913 0.875059 CGGGGTGAAGTTTTCTGCTC 59.125 55.000 0.00 0.00 0.00 4.26
881 914 0.472471 TCGGGGTGAAGTTTTCTGCT 59.528 50.000 0.00 0.00 0.00 4.24
882 915 0.591659 GTCGGGGTGAAGTTTTCTGC 59.408 55.000 0.00 0.00 0.00 4.26
883 916 0.865769 CGTCGGGGTGAAGTTTTCTG 59.134 55.000 0.00 0.00 0.00 3.02
884 917 0.250166 CCGTCGGGGTGAAGTTTTCT 60.250 55.000 2.34 0.00 0.00 2.52
885 918 0.249996 TCCGTCGGGGTGAAGTTTTC 60.250 55.000 12.29 0.00 37.00 2.29
886 919 0.180878 TTCCGTCGGGGTGAAGTTTT 59.819 50.000 12.29 0.00 37.00 2.43
887 920 0.250166 CTTCCGTCGGGGTGAAGTTT 60.250 55.000 12.29 0.00 37.00 2.66
888 921 1.370064 CTTCCGTCGGGGTGAAGTT 59.630 57.895 12.29 0.00 37.00 2.66
889 922 3.057337 CTTCCGTCGGGGTGAAGT 58.943 61.111 12.29 0.00 37.00 3.01
890 923 2.434359 GCTTCCGTCGGGGTGAAG 60.434 66.667 12.29 8.71 38.77 3.02
891 924 4.011517 GGCTTCCGTCGGGGTGAA 62.012 66.667 12.29 0.00 37.00 3.18
1225 1262 2.286523 CCTTCACCTCCACGAGCCT 61.287 63.158 0.00 0.00 0.00 4.58
1531 1568 2.350895 CCCCTCAACGGCATCACA 59.649 61.111 0.00 0.00 0.00 3.58
1533 1570 2.000701 ATCCCCCTCAACGGCATCA 61.001 57.895 0.00 0.00 0.00 3.07
1572 1609 1.274167 GTCACCACACGGATGGACTTA 59.726 52.381 13.66 0.00 43.02 2.24
1593 1630 2.230025 CACAAGAGACTCCATGACGTCT 59.770 50.000 17.92 14.25 42.79 4.18
1656 1693 2.222227 AGCCAATCCTCACCTTTTCC 57.778 50.000 0.00 0.00 0.00 3.13
1674 1711 4.029520 TCTTCCTCCTGATCTCTTCCAAG 58.970 47.826 0.00 0.00 0.00 3.61
1752 1789 2.502213 TCAGCATACCATTCGTACCG 57.498 50.000 0.00 0.00 0.00 4.02
2046 2092 4.772100 ACCAAGCTATACAAGTTTTGCCAT 59.228 37.500 0.00 0.00 0.00 4.40
2220 2283 1.067283 TGCTGTTGTTGTTGTTGGTGG 60.067 47.619 0.00 0.00 0.00 4.61
2223 2286 4.739046 TTTTTGCTGTTGTTGTTGTTGG 57.261 36.364 0.00 0.00 0.00 3.77
2241 2304 4.935205 GGACTGAAAGGCTTTGTTGTTTTT 59.065 37.500 18.79 0.00 46.21 1.94
2242 2305 4.503910 GGACTGAAAGGCTTTGTTGTTTT 58.496 39.130 18.79 0.00 46.21 2.43
2243 2306 3.118775 GGGACTGAAAGGCTTTGTTGTTT 60.119 43.478 18.79 0.00 46.21 2.83
2445 2508 2.951642 CCAGGCTTCACAAAAGTTCTGA 59.048 45.455 9.93 0.00 0.00 3.27
2494 2558 6.894339 ATCCGAACACCAGATTTTAGTTTT 57.106 33.333 0.00 0.00 0.00 2.43
2498 2562 6.345920 GTGTATCCGAACACCAGATTTTAG 57.654 41.667 4.82 0.00 43.23 1.85
2654 2718 7.139392 GTCAAGTCTCAACTTTATTTTGGTCC 58.861 38.462 0.00 0.00 43.28 4.46
2687 2751 4.907269 TCTATGGATGCCTGGTTCTATGAA 59.093 41.667 0.00 0.00 0.00 2.57
2746 2810 9.294030 CTAGAATGTTTGGATGCTAATTTGAAC 57.706 33.333 0.00 0.00 0.00 3.18
2747 2811 9.241919 TCTAGAATGTTTGGATGCTAATTTGAA 57.758 29.630 0.00 0.00 0.00 2.69
2748 2812 8.806429 TCTAGAATGTTTGGATGCTAATTTGA 57.194 30.769 0.00 0.00 0.00 2.69
2749 2813 9.512435 CTTCTAGAATGTTTGGATGCTAATTTG 57.488 33.333 5.44 0.00 0.00 2.32
2750 2814 9.466497 TCTTCTAGAATGTTTGGATGCTAATTT 57.534 29.630 5.44 0.00 0.00 1.82
2751 2815 8.897752 GTCTTCTAGAATGTTTGGATGCTAATT 58.102 33.333 5.44 0.00 0.00 1.40
2752 2816 8.049117 TGTCTTCTAGAATGTTTGGATGCTAAT 58.951 33.333 5.44 0.00 0.00 1.73
2753 2817 7.334421 GTGTCTTCTAGAATGTTTGGATGCTAA 59.666 37.037 5.44 0.00 0.00 3.09
2754 2818 6.818644 GTGTCTTCTAGAATGTTTGGATGCTA 59.181 38.462 5.44 0.00 0.00 3.49
2755 2819 5.645497 GTGTCTTCTAGAATGTTTGGATGCT 59.355 40.000 5.44 0.00 0.00 3.79
2756 2820 5.645497 AGTGTCTTCTAGAATGTTTGGATGC 59.355 40.000 5.44 0.00 0.00 3.91
2757 2821 7.819415 TGTAGTGTCTTCTAGAATGTTTGGATG 59.181 37.037 5.44 0.00 0.00 3.51
2832 2909 8.619546 GCAAGCTCTCTATTTTGAATATGTTCT 58.380 33.333 3.72 0.00 35.33 3.01
2846 2923 6.323482 TGTCTCTATTCTTGCAAGCTCTCTAT 59.677 38.462 21.99 9.67 0.00 1.98
2910 2987 1.962822 CGGCACTTGCAAGCTCTGA 60.963 57.895 26.27 0.00 44.36 3.27
2967 5400 7.290813 AGTAATTTGGAATGGAGGGAGTATTC 58.709 38.462 0.00 0.00 0.00 1.75
2968 5401 7.226059 AGTAATTTGGAATGGAGGGAGTATT 57.774 36.000 0.00 0.00 0.00 1.89
2969 5402 6.464465 CGAGTAATTTGGAATGGAGGGAGTAT 60.464 42.308 0.00 0.00 0.00 2.12
2970 5403 5.163343 CGAGTAATTTGGAATGGAGGGAGTA 60.163 44.000 0.00 0.00 0.00 2.59
2971 5404 4.384208 CGAGTAATTTGGAATGGAGGGAGT 60.384 45.833 0.00 0.00 0.00 3.85
2972 5405 4.130118 CGAGTAATTTGGAATGGAGGGAG 58.870 47.826 0.00 0.00 0.00 4.30
2973 5406 3.521937 ACGAGTAATTTGGAATGGAGGGA 59.478 43.478 0.00 0.00 0.00 4.20
2974 5407 3.877508 GACGAGTAATTTGGAATGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
2975 5408 3.555956 CGACGAGTAATTTGGAATGGAGG 59.444 47.826 0.00 0.00 0.00 4.30
2976 5409 4.032900 CACGACGAGTAATTTGGAATGGAG 59.967 45.833 0.00 0.00 0.00 3.86
2977 5410 3.930229 CACGACGAGTAATTTGGAATGGA 59.070 43.478 0.00 0.00 0.00 3.41
2978 5411 3.063452 CCACGACGAGTAATTTGGAATGG 59.937 47.826 0.00 0.00 0.00 3.16
2979 5412 3.682858 ACCACGACGAGTAATTTGGAATG 59.317 43.478 0.00 0.00 0.00 2.67
2980 5413 3.934068 ACCACGACGAGTAATTTGGAAT 58.066 40.909 0.00 0.00 0.00 3.01
2981 5414 3.389925 ACCACGACGAGTAATTTGGAA 57.610 42.857 0.00 0.00 0.00 3.53
2982 5415 3.389925 AACCACGACGAGTAATTTGGA 57.610 42.857 0.00 0.00 0.00 3.53
2983 5416 4.477302 AAAACCACGACGAGTAATTTGG 57.523 40.909 0.00 0.00 0.00 3.28
2984 5417 6.219302 ACTAAAACCACGACGAGTAATTTG 57.781 37.500 0.00 2.39 0.00 2.32
2985 5418 6.479660 TGAACTAAAACCACGACGAGTAATTT 59.520 34.615 0.00 0.34 0.00 1.82
2986 5419 5.984926 TGAACTAAAACCACGACGAGTAATT 59.015 36.000 0.00 1.08 0.00 1.40
2987 5420 5.531634 TGAACTAAAACCACGACGAGTAAT 58.468 37.500 0.00 0.00 0.00 1.89
2988 5421 4.930963 TGAACTAAAACCACGACGAGTAA 58.069 39.130 0.00 0.00 0.00 2.24
2989 5422 4.566545 TGAACTAAAACCACGACGAGTA 57.433 40.909 0.00 0.00 0.00 2.59
2990 5423 3.441496 TGAACTAAAACCACGACGAGT 57.559 42.857 0.00 0.00 0.00 4.18
2991 5424 4.782252 TTTGAACTAAAACCACGACGAG 57.218 40.909 0.00 0.00 0.00 4.18
2992 5425 5.738118 AATTTGAACTAAAACCACGACGA 57.262 34.783 0.00 0.00 0.00 4.20
2993 5426 5.966503 TCAAATTTGAACTAAAACCACGACG 59.033 36.000 18.45 0.00 33.55 5.12
2994 5427 7.743520 TTCAAATTTGAACTAAAACCACGAC 57.256 32.000 26.01 0.00 41.88 4.34
3011 5444 9.458374 CGTGGTTTTAGTTCAATAGTTCAAATT 57.542 29.630 0.00 0.00 0.00 1.82
3012 5445 8.842280 TCGTGGTTTTAGTTCAATAGTTCAAAT 58.158 29.630 0.00 0.00 0.00 2.32
3013 5446 8.124199 GTCGTGGTTTTAGTTCAATAGTTCAAA 58.876 33.333 0.00 0.00 0.00 2.69
3014 5447 7.517101 CGTCGTGGTTTTAGTTCAATAGTTCAA 60.517 37.037 0.00 0.00 0.00 2.69
3015 5448 6.074195 CGTCGTGGTTTTAGTTCAATAGTTCA 60.074 38.462 0.00 0.00 0.00 3.18
3016 5449 6.144402 TCGTCGTGGTTTTAGTTCAATAGTTC 59.856 38.462 0.00 0.00 0.00 3.01
3017 5450 5.984926 TCGTCGTGGTTTTAGTTCAATAGTT 59.015 36.000 0.00 0.00 0.00 2.24
3018 5451 5.531634 TCGTCGTGGTTTTAGTTCAATAGT 58.468 37.500 0.00 0.00 0.00 2.12
3019 5452 5.632347 ACTCGTCGTGGTTTTAGTTCAATAG 59.368 40.000 0.00 0.00 0.00 1.73
3020 5453 5.531634 ACTCGTCGTGGTTTTAGTTCAATA 58.468 37.500 0.00 0.00 0.00 1.90
3021 5454 4.374399 ACTCGTCGTGGTTTTAGTTCAAT 58.626 39.130 0.00 0.00 0.00 2.57
3022 5455 3.784338 ACTCGTCGTGGTTTTAGTTCAA 58.216 40.909 0.00 0.00 0.00 2.69
3023 5456 3.441496 ACTCGTCGTGGTTTTAGTTCA 57.559 42.857 0.00 0.00 0.00 3.18
3024 5457 6.457851 AATTACTCGTCGTGGTTTTAGTTC 57.542 37.500 0.00 0.00 0.00 3.01
3025 5458 6.293027 CCAAATTACTCGTCGTGGTTTTAGTT 60.293 38.462 0.00 0.00 0.00 2.24
3026 5459 5.178067 CCAAATTACTCGTCGTGGTTTTAGT 59.822 40.000 0.00 0.00 0.00 2.24
3027 5460 5.406175 TCCAAATTACTCGTCGTGGTTTTAG 59.594 40.000 0.00 0.00 0.00 1.85
3028 5461 5.295950 TCCAAATTACTCGTCGTGGTTTTA 58.704 37.500 0.00 0.00 0.00 1.52
3029 5462 4.128643 TCCAAATTACTCGTCGTGGTTTT 58.871 39.130 0.00 0.00 0.00 2.43
3030 5463 3.731089 TCCAAATTACTCGTCGTGGTTT 58.269 40.909 0.00 0.00 0.00 3.27
3031 5464 3.389925 TCCAAATTACTCGTCGTGGTT 57.610 42.857 0.00 0.00 0.00 3.67
3032 5465 3.389925 TTCCAAATTACTCGTCGTGGT 57.610 42.857 0.00 0.00 0.00 4.16
3033 5466 3.063452 CCATTCCAAATTACTCGTCGTGG 59.937 47.826 0.00 0.00 0.00 4.94
3034 5467 3.930229 TCCATTCCAAATTACTCGTCGTG 59.070 43.478 0.00 0.00 0.00 4.35
3035 5468 4.181578 CTCCATTCCAAATTACTCGTCGT 58.818 43.478 0.00 0.00 0.00 4.34
3036 5469 3.555956 CCTCCATTCCAAATTACTCGTCG 59.444 47.826 0.00 0.00 0.00 5.12
3037 5470 3.877508 CCCTCCATTCCAAATTACTCGTC 59.122 47.826 0.00 0.00 0.00 4.20
3038 5471 3.521937 TCCCTCCATTCCAAATTACTCGT 59.478 43.478 0.00 0.00 0.00 4.18
3039 5472 4.130118 CTCCCTCCATTCCAAATTACTCG 58.870 47.826 0.00 0.00 0.00 4.18
3040 5473 5.117406 ACTCCCTCCATTCCAAATTACTC 57.883 43.478 0.00 0.00 0.00 2.59
3041 5474 5.731678 ACTACTCCCTCCATTCCAAATTACT 59.268 40.000 0.00 0.00 0.00 2.24
3042 5475 6.002653 ACTACTCCCTCCATTCCAAATTAC 57.997 41.667 0.00 0.00 0.00 1.89
3043 5476 6.011981 ACAACTACTCCCTCCATTCCAAATTA 60.012 38.462 0.00 0.00 0.00 1.40
3044 5477 5.222337 ACAACTACTCCCTCCATTCCAAATT 60.222 40.000 0.00 0.00 0.00 1.82
3045 5478 4.292306 ACAACTACTCCCTCCATTCCAAAT 59.708 41.667 0.00 0.00 0.00 2.32
3046 5479 3.655777 ACAACTACTCCCTCCATTCCAAA 59.344 43.478 0.00 0.00 0.00 3.28
3047 5480 3.256704 ACAACTACTCCCTCCATTCCAA 58.743 45.455 0.00 0.00 0.00 3.53
3048 5481 2.915869 ACAACTACTCCCTCCATTCCA 58.084 47.619 0.00 0.00 0.00 3.53
3049 5482 4.302559 AAACAACTACTCCCTCCATTCC 57.697 45.455 0.00 0.00 0.00 3.01
3050 5483 4.459337 CCAAAACAACTACTCCCTCCATTC 59.541 45.833 0.00 0.00 0.00 2.67
3051 5484 4.105697 TCCAAAACAACTACTCCCTCCATT 59.894 41.667 0.00 0.00 0.00 3.16
3052 5485 3.655777 TCCAAAACAACTACTCCCTCCAT 59.344 43.478 0.00 0.00 0.00 3.41
3053 5486 3.050089 TCCAAAACAACTACTCCCTCCA 58.950 45.455 0.00 0.00 0.00 3.86
3054 5487 3.782656 TCCAAAACAACTACTCCCTCC 57.217 47.619 0.00 0.00 0.00 4.30
3055 5488 4.969484 TCTTCCAAAACAACTACTCCCTC 58.031 43.478 0.00 0.00 0.00 4.30
3056 5489 5.377478 CTTCTTCCAAAACAACTACTCCCT 58.623 41.667 0.00 0.00 0.00 4.20
3057 5490 4.519350 CCTTCTTCCAAAACAACTACTCCC 59.481 45.833 0.00 0.00 0.00 4.30
3058 5491 4.519350 CCCTTCTTCCAAAACAACTACTCC 59.481 45.833 0.00 0.00 0.00 3.85
3107 5541 1.229082 AGTCCCCTGACAAGGCGTA 60.229 57.895 0.00 0.00 44.33 4.42
3108 5542 2.526873 AGTCCCCTGACAAGGCGT 60.527 61.111 0.00 0.00 44.33 5.68
3109 5543 2.046892 CAGTCCCCTGACAAGGCG 60.047 66.667 0.00 0.00 44.33 5.52
3110 5544 2.360475 GCAGTCCCCTGACAAGGC 60.360 66.667 0.00 0.00 44.33 4.35
3112 5546 2.738213 AAGCGCAGTCCCCTGACAAG 62.738 60.000 11.47 0.00 44.33 3.16
3113 5547 1.476845 TAAGCGCAGTCCCCTGACAA 61.477 55.000 11.47 0.00 44.33 3.18
3193 5629 7.710907 AGCAGTCAATGTACGTATGTGATAAAT 59.289 33.333 0.00 0.00 0.00 1.40
3226 5663 2.229543 TCTACTGCGTGTCGTGGTTTAT 59.770 45.455 0.00 0.00 0.00 1.40
3257 5694 7.000575 ACAGCGTACATATGTGATAAACAAC 57.999 36.000 18.81 4.94 43.61 3.32
3269 5706 1.202533 GCCACAGGACAGCGTACATAT 60.203 52.381 0.00 0.00 0.00 1.78
3315 5752 7.392953 TCACAGTCAATAATGCATAAAACAGGA 59.607 33.333 0.00 0.00 0.00 3.86
3397 5834 8.615878 TGTTACAAACTAGTTCAATGCATAGT 57.384 30.769 8.95 0.00 0.00 2.12
3431 5868 9.109393 GTTAAGATGTGCCAATGAGTTTATAGA 57.891 33.333 0.00 0.00 0.00 1.98
3432 5869 8.892723 TGTTAAGATGTGCCAATGAGTTTATAG 58.107 33.333 0.00 0.00 0.00 1.31
3466 5974 8.737168 AAACTAGTTCAATGCATAGCTGATTA 57.263 30.769 8.95 0.00 0.00 1.75
3508 6016 6.552859 TTTGTTTTGCATCTCGAAGATACA 57.447 33.333 0.00 0.00 32.12 2.29
4371 7112 7.412853 AAAAGGCTTGTTTTTAGGTGTTAGA 57.587 32.000 0.00 0.00 0.00 2.10
4689 7431 0.535780 CTCTTCCCTGTGCAGTGCAA 60.536 55.000 21.67 9.49 41.47 4.08
4823 7567 1.322538 GGATCTTGGGCATGCGGTTT 61.323 55.000 12.44 0.00 0.00 3.27
4824 7568 1.754234 GGATCTTGGGCATGCGGTT 60.754 57.895 12.44 0.00 0.00 4.44
4825 7569 2.124151 GGATCTTGGGCATGCGGT 60.124 61.111 12.44 0.00 0.00 5.68
4826 7570 2.908940 GGGATCTTGGGCATGCGG 60.909 66.667 12.44 1.94 0.00 5.69
4827 7571 2.908940 GGGGATCTTGGGCATGCG 60.909 66.667 12.44 0.00 0.00 4.73
4828 7572 2.908940 CGGGGATCTTGGGCATGC 60.909 66.667 9.90 9.90 0.00 4.06
4829 7573 1.526917 GTCGGGGATCTTGGGCATG 60.527 63.158 0.00 0.00 0.00 4.06
4830 7574 2.919043 GTCGGGGATCTTGGGCAT 59.081 61.111 0.00 0.00 0.00 4.40
4831 7575 3.781307 CGTCGGGGATCTTGGGCA 61.781 66.667 0.00 0.00 0.00 5.36
4833 7577 3.740128 CTGCGTCGGGGATCTTGGG 62.740 68.421 0.00 0.00 0.00 4.12
4834 7578 2.202932 CTGCGTCGGGGATCTTGG 60.203 66.667 0.00 0.00 0.00 3.61
4835 7579 2.892425 GCTGCGTCGGGGATCTTG 60.892 66.667 0.00 0.00 0.00 3.02
4836 7580 4.514577 CGCTGCGTCGGGGATCTT 62.515 66.667 14.93 0.00 0.00 2.40
4844 7588 4.538283 ATCTCGTCCGCTGCGTCG 62.538 66.667 21.59 22.58 0.00 5.12
4845 7589 2.652496 GATCTCGTCCGCTGCGTC 60.652 66.667 21.59 12.31 0.00 5.19
4846 7590 4.538283 CGATCTCGTCCGCTGCGT 62.538 66.667 21.59 0.00 34.11 5.24
4847 7591 4.237809 TCGATCTCGTCCGCTGCG 62.238 66.667 16.34 16.34 40.80 5.18
4848 7592 2.352915 CTCGATCTCGTCCGCTGC 60.353 66.667 0.00 0.00 40.80 5.25
4849 7593 2.329690 CCTCGATCTCGTCCGCTG 59.670 66.667 0.00 0.00 40.80 5.18
4850 7594 2.124653 ACCTCGATCTCGTCCGCT 60.125 61.111 0.00 0.00 40.80 5.52
4851 7595 2.328639 GACCTCGATCTCGTCCGC 59.671 66.667 0.00 0.00 40.80 5.54
4852 7596 3.023950 GGACCTCGATCTCGTCCG 58.976 66.667 6.89 0.00 36.97 4.79
4853 7597 1.104630 AAAGGACCTCGATCTCGTCC 58.895 55.000 12.48 12.48 45.40 4.79
4854 7598 1.799548 GCAAAGGACCTCGATCTCGTC 60.800 57.143 0.00 0.00 40.80 4.20
4855 7599 0.173708 GCAAAGGACCTCGATCTCGT 59.826 55.000 0.00 0.00 40.80 4.18
4856 7600 0.867753 CGCAAAGGACCTCGATCTCG 60.868 60.000 0.00 0.00 41.45 4.04
4857 7601 1.148759 GCGCAAAGGACCTCGATCTC 61.149 60.000 0.30 0.00 0.00 2.75
4858 7602 1.153549 GCGCAAAGGACCTCGATCT 60.154 57.895 0.30 0.00 0.00 2.75
4859 7603 1.424493 CTGCGCAAAGGACCTCGATC 61.424 60.000 13.05 0.00 0.00 3.69
4860 7604 1.448540 CTGCGCAAAGGACCTCGAT 60.449 57.895 13.05 0.00 0.00 3.59
4861 7605 2.048222 CTGCGCAAAGGACCTCGA 60.048 61.111 13.05 0.00 0.00 4.04
4862 7606 3.793144 GCTGCGCAAAGGACCTCG 61.793 66.667 13.05 0.00 0.00 4.63
4863 7607 3.793144 CGCTGCGCAAAGGACCTC 61.793 66.667 13.05 0.00 0.00 3.85
4864 7608 3.825160 TTCGCTGCGCAAAGGACCT 62.825 57.895 18.65 0.00 0.00 3.85
4865 7609 3.314388 CTTCGCTGCGCAAAGGACC 62.314 63.158 18.65 0.00 0.00 4.46
4866 7610 2.174349 CTTCGCTGCGCAAAGGAC 59.826 61.111 18.65 0.00 0.00 3.85
4867 7611 2.029288 CTCTTCGCTGCGCAAAGGA 61.029 57.895 18.65 6.03 0.00 3.36
4868 7612 2.477845 CTCTTCGCTGCGCAAAGG 59.522 61.111 18.65 0.00 0.00 3.11
4869 7613 2.202272 GCTCTTCGCTGCGCAAAG 60.202 61.111 18.65 16.49 35.14 2.77
4870 7614 2.542013 TTGCTCTTCGCTGCGCAAA 61.542 52.632 18.65 6.58 39.19 3.68
4871 7615 2.971959 TTGCTCTTCGCTGCGCAA 60.972 55.556 18.65 12.35 39.77 4.85
4872 7616 3.716006 GTTGCTCTTCGCTGCGCA 61.716 61.111 18.65 10.98 40.11 6.09
4873 7617 2.959357 AAGTTGCTCTTCGCTGCGC 61.959 57.895 18.65 0.00 40.11 6.09
4874 7618 1.154525 CAAGTTGCTCTTCGCTGCG 60.155 57.895 17.25 17.25 40.11 5.18
4875 7619 1.208614 CCAAGTTGCTCTTCGCTGC 59.791 57.895 0.00 0.00 40.11 5.25
4876 7620 0.795085 CTCCAAGTTGCTCTTCGCTG 59.205 55.000 0.00 0.00 40.11 5.18
4877 7621 0.321122 CCTCCAAGTTGCTCTTCGCT 60.321 55.000 0.00 0.00 40.11 4.93
4878 7622 0.320771 TCCTCCAAGTTGCTCTTCGC 60.321 55.000 0.00 0.00 33.63 4.70
4879 7623 1.719600 CTCCTCCAAGTTGCTCTTCG 58.280 55.000 0.00 0.00 33.63 3.79
4880 7624 1.447945 GCTCCTCCAAGTTGCTCTTC 58.552 55.000 0.00 0.00 33.63 2.87
4881 7625 0.321122 CGCTCCTCCAAGTTGCTCTT 60.321 55.000 0.00 0.00 36.75 2.85
4882 7626 1.294780 CGCTCCTCCAAGTTGCTCT 59.705 57.895 0.00 0.00 0.00 4.09
4883 7627 1.743252 CCGCTCCTCCAAGTTGCTC 60.743 63.158 0.00 0.00 0.00 4.26
4884 7628 2.348998 CCGCTCCTCCAAGTTGCT 59.651 61.111 0.00 0.00 0.00 3.91
4885 7629 3.435186 GCCGCTCCTCCAAGTTGC 61.435 66.667 0.00 0.00 0.00 4.17
4886 7630 2.032528 TGCCGCTCCTCCAAGTTG 59.967 61.111 0.00 0.00 0.00 3.16
4887 7631 2.348998 CTGCCGCTCCTCCAAGTT 59.651 61.111 0.00 0.00 0.00 2.66
4888 7632 4.400961 GCTGCCGCTCCTCCAAGT 62.401 66.667 0.00 0.00 0.00 3.16
4889 7633 4.093291 AGCTGCCGCTCCTCCAAG 62.093 66.667 0.00 0.00 45.15 3.61
4890 7634 4.399395 CAGCTGCCGCTCCTCCAA 62.399 66.667 0.00 0.00 45.15 3.53
4902 7646 2.745100 ATGCGTGGTCTGCAGCTG 60.745 61.111 10.11 10.11 46.98 4.24
4903 7647 2.435586 GATGCGTGGTCTGCAGCT 60.436 61.111 9.47 0.00 46.98 4.24
4905 7649 1.812922 GGAGATGCGTGGTCTGCAG 60.813 63.158 7.63 7.63 46.98 4.41
4907 7651 1.812922 CAGGAGATGCGTGGTCTGC 60.813 63.158 0.00 0.00 34.64 4.26
4908 7652 1.812922 GCAGGAGATGCGTGGTCTG 60.813 63.158 0.00 0.00 46.99 3.51
4909 7653 2.581354 GCAGGAGATGCGTGGTCT 59.419 61.111 0.00 0.00 46.99 3.85
4917 7661 3.190849 CGGCGTGTGCAGGAGATG 61.191 66.667 0.00 0.00 45.35 2.90
4918 7662 3.381983 TCGGCGTGTGCAGGAGAT 61.382 61.111 6.85 0.00 45.35 2.75
4919 7663 4.357947 GTCGGCGTGTGCAGGAGA 62.358 66.667 6.85 0.00 45.35 3.71
4979 7723 4.789075 CTACCCGCCACGTGTCGG 62.789 72.222 29.85 29.85 44.89 4.79
4980 7724 4.047059 ACTACCCGCCACGTGTCG 62.047 66.667 12.77 12.77 0.00 4.35
4981 7725 2.221906 ATCACTACCCGCCACGTGTC 62.222 60.000 15.65 0.00 0.00 3.67
4982 7726 2.221906 GATCACTACCCGCCACGTGT 62.222 60.000 15.65 0.00 0.00 4.49
4983 7727 1.518572 GATCACTACCCGCCACGTG 60.519 63.158 9.08 9.08 0.00 4.49
4984 7728 2.718073 GGATCACTACCCGCCACGT 61.718 63.158 0.00 0.00 0.00 4.49
4985 7729 2.106332 GGATCACTACCCGCCACG 59.894 66.667 0.00 0.00 0.00 4.94
4986 7730 0.462047 CTTGGATCACTACCCGCCAC 60.462 60.000 0.00 0.00 0.00 5.01
4987 7731 0.616395 TCTTGGATCACTACCCGCCA 60.616 55.000 0.00 0.00 0.00 5.69
4988 7732 0.179081 GTCTTGGATCACTACCCGCC 60.179 60.000 0.00 0.00 0.00 6.13
4989 7733 0.527817 CGTCTTGGATCACTACCCGC 60.528 60.000 0.00 0.00 0.00 6.13
4990 7734 1.100510 TCGTCTTGGATCACTACCCG 58.899 55.000 0.00 0.00 0.00 5.28
4991 7735 3.522553 CTTTCGTCTTGGATCACTACCC 58.477 50.000 0.00 0.00 0.00 3.69
4992 7736 2.930682 GCTTTCGTCTTGGATCACTACC 59.069 50.000 0.00 0.00 0.00 3.18
4993 7737 2.599082 CGCTTTCGTCTTGGATCACTAC 59.401 50.000 0.00 0.00 0.00 2.73
4994 7738 2.416836 CCGCTTTCGTCTTGGATCACTA 60.417 50.000 0.00 0.00 0.00 2.74
4995 7739 1.673033 CCGCTTTCGTCTTGGATCACT 60.673 52.381 0.00 0.00 0.00 3.41
4996 7740 0.721718 CCGCTTTCGTCTTGGATCAC 59.278 55.000 0.00 0.00 0.00 3.06
4997 7741 0.320374 ACCGCTTTCGTCTTGGATCA 59.680 50.000 0.00 0.00 0.00 2.92
4998 7742 0.721718 CACCGCTTTCGTCTTGGATC 59.278 55.000 0.00 0.00 0.00 3.36
4999 7743 0.320374 TCACCGCTTTCGTCTTGGAT 59.680 50.000 0.00 0.00 0.00 3.41
5000 7744 0.599204 GTCACCGCTTTCGTCTTGGA 60.599 55.000 0.00 0.00 0.00 3.53
5001 7745 1.860078 GTCACCGCTTTCGTCTTGG 59.140 57.895 0.00 0.00 0.00 3.61
5002 7746 1.487231 CGTCACCGCTTTCGTCTTG 59.513 57.895 0.00 0.00 0.00 3.02
5003 7747 1.663702 CCGTCACCGCTTTCGTCTT 60.664 57.895 0.00 0.00 0.00 3.01
5004 7748 2.049433 CCGTCACCGCTTTCGTCT 60.049 61.111 0.00 0.00 0.00 4.18
5005 7749 3.774702 GCCGTCACCGCTTTCGTC 61.775 66.667 0.00 0.00 0.00 4.20
5008 7752 3.774702 GTCGCCGTCACCGCTTTC 61.775 66.667 0.00 0.00 0.00 2.62
5022 7766 4.143333 ATCAAGTCCCCGCCGTCG 62.143 66.667 0.00 0.00 0.00 5.12
5023 7767 2.202892 GATCAAGTCCCCGCCGTC 60.203 66.667 0.00 0.00 0.00 4.79
5024 7768 2.683933 AGATCAAGTCCCCGCCGT 60.684 61.111 0.00 0.00 0.00 5.68
5025 7769 2.202932 CAGATCAAGTCCCCGCCG 60.203 66.667 0.00 0.00 0.00 6.46
5026 7770 2.514824 GCAGATCAAGTCCCCGCC 60.515 66.667 0.00 0.00 0.00 6.13
5027 7771 1.817099 CAGCAGATCAAGTCCCCGC 60.817 63.158 0.00 0.00 0.00 6.13
5028 7772 1.153289 CCAGCAGATCAAGTCCCCG 60.153 63.158 0.00 0.00 0.00 5.73
5029 7773 0.842635 ATCCAGCAGATCAAGTCCCC 59.157 55.000 0.00 0.00 0.00 4.81
5030 7774 1.211457 ACATCCAGCAGATCAAGTCCC 59.789 52.381 0.00 0.00 30.59 4.46
5031 7775 2.286872 CACATCCAGCAGATCAAGTCC 58.713 52.381 0.00 0.00 30.59 3.85
5032 7776 2.093288 TCCACATCCAGCAGATCAAGTC 60.093 50.000 0.00 0.00 30.59 3.01
5033 7777 1.911357 TCCACATCCAGCAGATCAAGT 59.089 47.619 0.00 0.00 30.59 3.16
5034 7778 2.286872 GTCCACATCCAGCAGATCAAG 58.713 52.381 0.00 0.00 30.59 3.02
5035 7779 1.629861 TGTCCACATCCAGCAGATCAA 59.370 47.619 0.00 0.00 30.59 2.57
5036 7780 1.065926 GTGTCCACATCCAGCAGATCA 60.066 52.381 0.00 0.00 30.59 2.92
5037 7781 1.661341 GTGTCCACATCCAGCAGATC 58.339 55.000 0.00 0.00 30.59 2.75
5038 7782 0.254178 GGTGTCCACATCCAGCAGAT 59.746 55.000 0.00 0.00 34.66 2.90
5039 7783 1.679311 GGTGTCCACATCCAGCAGA 59.321 57.895 0.00 0.00 0.00 4.26
5040 7784 1.377725 GGGTGTCCACATCCAGCAG 60.378 63.158 3.96 0.00 46.38 4.24
5041 7785 2.756400 GGGTGTCCACATCCAGCA 59.244 61.111 3.96 0.00 46.38 4.41
5046 7790 0.107017 CATCCCAGGGTGTCCACATC 60.107 60.000 5.01 0.00 34.83 3.06
5047 7791 0.549902 TCATCCCAGGGTGTCCACAT 60.550 55.000 5.01 0.00 34.83 3.21
5048 7792 1.151921 TCATCCCAGGGTGTCCACA 60.152 57.895 5.01 0.00 34.83 4.17
5049 7793 1.299976 GTCATCCCAGGGTGTCCAC 59.700 63.158 5.01 0.00 34.83 4.02
5050 7794 2.290287 CGTCATCCCAGGGTGTCCA 61.290 63.158 5.01 0.00 34.83 4.02
5051 7795 2.584608 CGTCATCCCAGGGTGTCC 59.415 66.667 5.01 0.00 0.00 4.02
5052 7796 2.584608 CCGTCATCCCAGGGTGTC 59.415 66.667 5.01 0.56 0.00 3.67
5053 7797 3.717294 GCCGTCATCCCAGGGTGT 61.717 66.667 5.01 0.00 0.00 4.16
5054 7798 4.838152 CGCCGTCATCCCAGGGTG 62.838 72.222 5.01 3.44 0.00 4.61
5061 7805 3.740128 ATCAGTGCCGCCGTCATCC 62.740 63.158 0.00 0.00 0.00 3.51
5062 7806 2.202932 ATCAGTGCCGCCGTCATC 60.203 61.111 0.00 0.00 0.00 2.92
5063 7807 2.512286 CATCAGTGCCGCCGTCAT 60.512 61.111 0.00 0.00 0.00 3.06
5064 7808 4.758251 CCATCAGTGCCGCCGTCA 62.758 66.667 0.00 0.00 0.00 4.35
5067 7811 4.776322 TTCCCATCAGTGCCGCCG 62.776 66.667 0.00 0.00 0.00 6.46
5068 7812 3.134127 GTTCCCATCAGTGCCGCC 61.134 66.667 0.00 0.00 0.00 6.13
5069 7813 3.499737 CGTTCCCATCAGTGCCGC 61.500 66.667 0.00 0.00 0.00 6.53
5070 7814 1.811266 CTCGTTCCCATCAGTGCCG 60.811 63.158 0.00 0.00 0.00 5.69
5071 7815 1.450312 CCTCGTTCCCATCAGTGCC 60.450 63.158 0.00 0.00 0.00 5.01
5072 7816 0.741221 GACCTCGTTCCCATCAGTGC 60.741 60.000 0.00 0.00 0.00 4.40
5073 7817 0.458543 CGACCTCGTTCCCATCAGTG 60.459 60.000 0.00 0.00 34.11 3.66
5074 7818 1.890894 CGACCTCGTTCCCATCAGT 59.109 57.895 0.00 0.00 34.11 3.41
5075 7819 4.814900 CGACCTCGTTCCCATCAG 57.185 61.111 0.00 0.00 34.11 2.90
5085 7829 4.477975 GGGAGTGCGACGACCTCG 62.478 72.222 0.00 0.00 45.97 4.63
5086 7830 4.477975 CGGGAGTGCGACGACCTC 62.478 72.222 0.00 2.08 0.00 3.85
5101 7845 1.183030 TATGGGATGCCCTACGACGG 61.183 60.000 0.00 0.00 45.70 4.79
5102 7846 0.038526 GTATGGGATGCCCTACGACG 60.039 60.000 0.00 0.00 45.70 5.12
5103 7847 1.000955 CAGTATGGGATGCCCTACGAC 59.999 57.143 11.98 0.00 45.70 4.34
5104 7848 1.338107 CAGTATGGGATGCCCTACGA 58.662 55.000 11.98 0.00 45.70 3.43
5105 7849 3.914984 CAGTATGGGATGCCCTACG 57.085 57.895 11.98 5.05 45.70 3.51
5117 7861 2.279517 GCTCCGTCGCCCAGTATG 60.280 66.667 0.00 0.00 0.00 2.39
5118 7862 2.442272 AGCTCCGTCGCCCAGTAT 60.442 61.111 0.00 0.00 0.00 2.12
5119 7863 3.449227 CAGCTCCGTCGCCCAGTA 61.449 66.667 0.00 0.00 0.00 2.74
5121 7865 4.803426 GTCAGCTCCGTCGCCCAG 62.803 72.222 0.00 0.00 0.00 4.45
5130 7874 4.394712 CCACCACCGGTCAGCTCC 62.395 72.222 2.59 0.00 31.02 4.70
5392 9615 4.042251 CTCACCTGGGAGGAGGTC 57.958 66.667 0.00 0.00 45.15 3.85
5557 9784 3.324556 AGCAGCACCATAACAATTTGGTT 59.675 39.130 0.78 0.00 43.73 3.67
5790 10019 3.006677 GTAATGGGCCTGGGCTGA 58.993 61.111 20.47 7.58 41.60 4.26
5835 10064 5.048846 AGGTTCAAAGAAAAGGTAGAGCA 57.951 39.130 0.00 0.00 0.00 4.26
6144 10383 1.129437 GATCGAGGCACAAAACTGCTC 59.871 52.381 0.00 0.00 37.33 4.26
6286 10528 6.868864 TCAAAGTTGAAAGATCTAGAAGGTCG 59.131 38.462 0.00 0.00 33.55 4.79
6432 10674 6.368516 CAGAAAGCAGAAGAAGAAAGTAGGAG 59.631 42.308 0.00 0.00 0.00 3.69
6551 10793 4.039488 TGTCTGCGTAGGAAAAGACCTAAA 59.961 41.667 0.00 0.00 43.06 1.85
6567 10809 1.133253 CGATTGCACCTTGTCTGCG 59.867 57.895 0.00 0.00 37.46 5.18
6584 10828 3.883744 AAGCAACCACTCGCCCTCG 62.884 63.158 0.00 0.00 0.00 4.63
6595 10839 3.452755 ACCTAACAAGCAAAAGCAACC 57.547 42.857 0.00 0.00 0.00 3.77
6625 10869 2.027561 CGGACCTGTATTGAAGGGAACA 60.028 50.000 0.00 0.00 39.30 3.18
6829 11073 3.837213 GCGAGTGCATTATGCCATTAT 57.163 42.857 15.06 0.00 44.23 1.28
6908 11152 8.718102 ATACTTACTTTACAGTACATGCTTGG 57.282 34.615 4.44 0.00 35.05 3.61
6910 11154 9.938280 TCAATACTTACTTTACAGTACATGCTT 57.062 29.630 0.00 0.00 35.05 3.91
7310 11562 0.816018 ACGATTCGGTTTGCACCACA 60.816 50.000 11.29 0.00 44.53 4.17
7323 11576 8.025243 TCTAAGGTAACAACAATTCACGATTC 57.975 34.615 0.00 0.00 41.41 2.52
7353 11606 3.002759 TCATCGTTGCAATTTCGACACAA 59.997 39.130 12.17 0.00 36.46 3.33
7371 11624 9.499585 CAATCAAGATACAACAAATGTCTCATC 57.500 33.333 0.00 0.00 42.70 2.92
7536 11795 8.426489 TGTAACCGGTCTATCTATAAGCAAAAT 58.574 33.333 8.04 0.00 0.00 1.82
7555 11814 2.930040 AGAGTTGATGCGAATGTAACCG 59.070 45.455 0.00 0.00 0.00 4.44
7610 11869 7.120138 CACCCGTTTGAACCACTAAAATATACT 59.880 37.037 0.00 0.00 0.00 2.12
7620 11879 1.604604 CATCACCCGTTTGAACCACT 58.395 50.000 0.00 0.00 0.00 4.00
7707 12023 8.234546 GCTCTTTTATTTACATCTCCGTTTTGA 58.765 33.333 0.00 0.00 0.00 2.69
8022 12684 1.079819 GAGCACTACTGGAAGCGCA 60.080 57.895 11.47 0.00 37.60 6.09
8126 12788 1.135333 GAAGGCGAAGAAGAGACCGAT 59.865 52.381 0.00 0.00 0.00 4.18
8153 12817 1.683917 CGTCCGGATGAAGGAGATTCT 59.316 52.381 19.48 0.00 38.65 2.40
8155 12819 0.105039 GCGTCCGGATGAAGGAGATT 59.895 55.000 28.06 0.00 38.65 2.40
8281 12982 1.274703 ATCCCACCGTCAATGAGGCT 61.275 55.000 0.00 0.00 0.00 4.58


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.