Multiple sequence alignment - TraesCS7B01G285800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G285800 chr7B 100.000 4992 0 0 1 4992 521124756 521119765 0.000000e+00 9219.0
1 TraesCS7B01G285800 chr7B 92.579 2776 173 12 945 3687 521133804 521131029 0.000000e+00 3954.0
2 TraesCS7B01G285800 chr7B 88.002 2442 239 28 956 3370 521142914 521140500 0.000000e+00 2837.0
3 TraesCS7B01G285800 chr7B 92.308 481 31 4 3883 4361 521131031 521130555 0.000000e+00 678.0
4 TraesCS7B01G285800 chr7B 97.596 208 5 0 3678 3885 27763569 27763362 1.710000e-94 357.0
5 TraesCS7B01G285800 chr7B 97.537 203 3 2 3685 3886 647685437 647685236 3.700000e-91 346.0
6 TraesCS7B01G285800 chr7B 96.875 64 2 0 402 465 611967879 611967816 1.900000e-19 108.0
7 TraesCS7B01G285800 chr7A 96.252 3148 110 3 548 3687 558083013 558079866 0.000000e+00 5153.0
8 TraesCS7B01G285800 chr7A 93.958 2317 119 13 1387 3687 558093050 558090739 0.000000e+00 3483.0
9 TraesCS7B01G285800 chr7A 87.036 2692 284 40 955 3605 558102227 558099560 0.000000e+00 2977.0
10 TraesCS7B01G285800 chr7A 96.130 1111 36 6 3883 4992 558079868 558078764 0.000000e+00 1807.0
11 TraesCS7B01G285800 chr7A 88.588 517 41 9 947 1445 558093535 558093019 3.300000e-171 612.0
12 TraesCS7B01G285800 chr7A 92.857 392 22 4 3972 4361 558090365 558089978 9.380000e-157 564.0
13 TraesCS7B01G285800 chr7A 94.505 91 5 0 3883 3973 558090741 558090651 1.870000e-29 141.0
14 TraesCS7B01G285800 chr7A 86.726 113 11 4 64 174 547361477 547361367 6.790000e-24 122.0
15 TraesCS7B01G285800 chr7A 94.118 51 1 2 3638 3687 558090917 558090868 5.360000e-10 76.8
16 TraesCS7B01G285800 chr7A 95.652 46 1 1 3642 3687 558080024 558079980 6.930000e-09 73.1
17 TraesCS7B01G285800 chr7D 96.027 3146 104 9 550 3687 491791401 491788269 0.000000e+00 5097.0
18 TraesCS7B01G285800 chr7D 92.133 2771 178 21 945 3687 491801069 491798311 0.000000e+00 3873.0
19 TraesCS7B01G285800 chr7D 87.629 2716 281 33 956 3639 491864565 491861873 0.000000e+00 3103.0
20 TraesCS7B01G285800 chr7D 97.658 1110 22 4 3883 4990 491788271 491787164 0.000000e+00 1903.0
21 TraesCS7B01G285800 chr7D 91.304 483 32 7 3883 4361 491798313 491797837 0.000000e+00 651.0
22 TraesCS7B01G285800 chr7D 96.682 211 5 1 3685 3893 28071198 28070988 2.860000e-92 350.0
23 TraesCS7B01G285800 chr7D 81.948 349 46 14 30 374 610915864 610916199 3.810000e-71 279.0
24 TraesCS7B01G285800 chr7D 79.459 370 41 21 34 402 485099899 485100234 3.890000e-56 230.0
25 TraesCS7B01G285800 chr7D 79.718 355 39 20 31 384 485100203 485099881 5.030000e-55 226.0
26 TraesCS7B01G285800 chr7D 95.714 70 3 0 468 537 491791649 491791580 4.080000e-21 113.0
27 TraesCS7B01G285800 chr7D 90.164 61 3 3 3629 3687 491798499 491798440 5.360000e-10 76.8
28 TraesCS7B01G285800 chr7D 95.652 46 1 1 3642 3687 491788427 491788383 6.930000e-09 73.1
29 TraesCS7B01G285800 chr2D 75.618 1698 334 48 1829 3465 599927245 599928923 0.000000e+00 769.0
30 TraesCS7B01G285800 chr2D 98.010 201 4 0 3685 3885 632583145 632583345 2.860000e-92 350.0
31 TraesCS7B01G285800 chr3A 87.395 357 38 6 31 384 144443914 144444266 2.160000e-108 403.0
32 TraesCS7B01G285800 chr6B 98.010 201 4 0 3685 3885 88720423 88720223 2.860000e-92 350.0
33 TraesCS7B01G285800 chr6B 95.455 66 3 0 401 466 15739253 15739318 6.830000e-19 106.0
34 TraesCS7B01G285800 chr3B 98.477 197 3 0 3687 3883 622078839 622079035 1.030000e-91 348.0
35 TraesCS7B01G285800 chr3B 95.714 210 9 0 3676 3885 338601156 338601365 6.190000e-89 339.0
36 TraesCS7B01G285800 chr3B 93.363 226 10 3 3685 3908 408415278 408415500 3.730000e-86 329.0
37 TraesCS7B01G285800 chr3B 96.875 64 2 0 402 465 509998865 509998928 1.900000e-19 108.0
38 TraesCS7B01G285800 chr3B 95.455 66 3 0 402 467 408551099 408551164 6.830000e-19 106.0
39 TraesCS7B01G285800 chr5B 84.615 351 49 5 35 384 680925926 680926272 1.330000e-90 344.0
40 TraesCS7B01G285800 chr2B 97.059 204 6 0 3685 3888 65096470 65096267 1.330000e-90 344.0
41 TraesCS7B01G285800 chr2B 79.403 335 56 9 49 380 129692191 129691867 1.810000e-54 224.0
42 TraesCS7B01G285800 chr1D 78.075 187 35 6 65 248 366230270 366230453 4.080000e-21 113.0
43 TraesCS7B01G285800 chr5A 96.875 64 2 0 402 465 53215033 53215096 1.900000e-19 108.0
44 TraesCS7B01G285800 chr5A 95.385 65 3 0 401 465 109342462 109342526 2.460000e-18 104.0
45 TraesCS7B01G285800 chr4B 96.875 64 2 0 402 465 36001182 36001245 1.900000e-19 108.0
46 TraesCS7B01G285800 chr1B 96.875 64 2 0 402 465 359380861 359380798 1.900000e-19 108.0
47 TraesCS7B01G285800 chr1B 95.385 65 3 0 401 465 51411497 51411561 2.460000e-18 104.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G285800 chr7B 521119765 521124756 4991 True 9219.000000 9219 100.000000 1 4992 1 chr7B.!!$R2 4991
1 TraesCS7B01G285800 chr7B 521140500 521142914 2414 True 2837.000000 2837 88.002000 956 3370 1 chr7B.!!$R3 2414
2 TraesCS7B01G285800 chr7B 521130555 521133804 3249 True 2316.000000 3954 92.443500 945 4361 2 chr7B.!!$R6 3416
3 TraesCS7B01G285800 chr7A 558099560 558102227 2667 True 2977.000000 2977 87.036000 955 3605 1 chr7A.!!$R2 2650
4 TraesCS7B01G285800 chr7A 558078764 558083013 4249 True 2344.366667 5153 96.011333 548 4992 3 chr7A.!!$R3 4444
5 TraesCS7B01G285800 chr7A 558089978 558093535 3557 True 975.360000 3483 92.805200 947 4361 5 chr7A.!!$R4 3414
6 TraesCS7B01G285800 chr7D 491861873 491864565 2692 True 3103.000000 3103 87.629000 956 3639 1 chr7D.!!$R3 2683
7 TraesCS7B01G285800 chr7D 491787164 491791649 4485 True 1796.525000 5097 96.262750 468 4990 4 chr7D.!!$R4 4522
8 TraesCS7B01G285800 chr7D 491797837 491801069 3232 True 1533.600000 3873 91.200333 945 4361 3 chr7D.!!$R5 3416
9 TraesCS7B01G285800 chr2D 599927245 599928923 1678 False 769.000000 769 75.618000 1829 3465 1 chr2D.!!$F1 1636

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
660 827 0.034477 AACCTCGGCGATGGGAAAAT 60.034 50.0 20.49 1.68 0.0 1.82 F
1959 2203 0.108138 GCATCTACGTCAACCCAGCT 60.108 55.0 0.00 0.00 0.0 4.24 F
2634 2911 0.110486 GAGCAGGAGGTTTTGGGACA 59.890 55.0 0.00 0.00 0.0 4.02 F
3754 4071 0.040425 CGGGTTTTTCTGAAGCACCG 60.040 55.0 11.74 10.55 0.0 4.94 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2528 2802 0.035439 ACTACCTTGATTGGTGGCCG 60.035 55.000 0.00 0.00 41.53 6.13 R
3735 4052 0.040425 CGGTGCTTCAGAAAAACCCG 60.040 55.000 7.91 3.09 0.00 5.28 R
3848 4165 0.253327 GAAGGTGCTTAGGGGAGGTG 59.747 60.000 0.00 0.00 0.00 4.00 R
4922 5530 6.351966 GCCTACTTCTAAGGTTGGATACTTGT 60.352 42.308 0.00 0.00 36.43 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.697166 AGTTTGCCGGAAAATATCAGGT 58.303 40.909 11.76 0.00 44.47 4.00
22 23 3.443681 AGTTTGCCGGAAAATATCAGGTG 59.556 43.478 11.76 0.00 44.47 4.00
23 24 3.358111 TTGCCGGAAAATATCAGGTGA 57.642 42.857 5.05 0.00 44.47 4.02
24 25 3.576078 TGCCGGAAAATATCAGGTGAT 57.424 42.857 5.05 0.00 44.47 3.06
25 26 4.698201 TGCCGGAAAATATCAGGTGATA 57.302 40.909 5.05 2.19 44.47 2.15
26 27 4.385825 TGCCGGAAAATATCAGGTGATAC 58.614 43.478 5.05 0.00 44.47 2.24
27 28 3.751698 GCCGGAAAATATCAGGTGATACC 59.248 47.826 5.05 0.00 44.47 2.73
28 29 4.745478 GCCGGAAAATATCAGGTGATACCA 60.745 45.833 5.05 0.00 44.47 3.25
29 30 4.755123 CCGGAAAATATCAGGTGATACCAC 59.245 45.833 0.00 0.00 41.95 4.16
30 31 5.454755 CCGGAAAATATCAGGTGATACCACT 60.455 44.000 0.00 0.00 41.95 4.00
31 32 6.239487 CCGGAAAATATCAGGTGATACCACTA 60.239 42.308 0.00 0.00 41.95 2.74
32 33 7.386851 CGGAAAATATCAGGTGATACCACTAT 58.613 38.462 1.72 0.00 41.95 2.12
33 34 7.545965 CGGAAAATATCAGGTGATACCACTATC 59.454 40.741 1.72 0.00 41.95 2.08
34 35 8.375506 GGAAAATATCAGGTGATACCACTATCA 58.624 37.037 1.72 0.00 41.95 2.15
35 36 9.778741 GAAAATATCAGGTGATACCACTATCAA 57.221 33.333 1.72 0.00 41.95 2.57
36 37 9.561069 AAAATATCAGGTGATACCACTATCAAC 57.439 33.333 1.72 0.00 44.62 3.18
45 46 9.444600 GGTGATACCACTATCAACTTAAAAGAA 57.555 33.333 0.00 0.00 42.03 2.52
117 118 4.602340 GACATATATGTCGACAACCCCT 57.398 45.455 25.89 8.19 46.46 4.79
118 119 5.717078 GACATATATGTCGACAACCCCTA 57.283 43.478 25.89 10.40 46.46 3.53
119 120 6.092955 GACATATATGTCGACAACCCCTAA 57.907 41.667 25.89 4.53 46.46 2.69
120 121 6.488769 ACATATATGTCGACAACCCCTAAA 57.511 37.500 24.13 2.91 35.87 1.85
121 122 6.891388 ACATATATGTCGACAACCCCTAAAA 58.109 36.000 24.13 3.44 35.87 1.52
122 123 7.514721 ACATATATGTCGACAACCCCTAAAAT 58.485 34.615 24.13 4.15 35.87 1.82
123 124 8.653191 ACATATATGTCGACAACCCCTAAAATA 58.347 33.333 24.13 6.49 35.87 1.40
124 125 9.667107 CATATATGTCGACAACCCCTAAAATAT 57.333 33.333 24.13 13.39 0.00 1.28
126 127 6.937436 ATGTCGACAACCCCTAAAATATTC 57.063 37.500 24.13 0.00 0.00 1.75
127 128 5.806818 TGTCGACAACCCCTAAAATATTCA 58.193 37.500 17.62 0.00 0.00 2.57
128 129 5.878116 TGTCGACAACCCCTAAAATATTCAG 59.122 40.000 17.62 0.00 0.00 3.02
129 130 4.879545 TCGACAACCCCTAAAATATTCAGC 59.120 41.667 0.00 0.00 0.00 4.26
130 131 4.881850 CGACAACCCCTAAAATATTCAGCT 59.118 41.667 0.00 0.00 0.00 4.24
131 132 5.007724 CGACAACCCCTAAAATATTCAGCTC 59.992 44.000 0.00 0.00 0.00 4.09
132 133 5.826643 ACAACCCCTAAAATATTCAGCTCA 58.173 37.500 0.00 0.00 0.00 4.26
133 134 6.252995 ACAACCCCTAAAATATTCAGCTCAA 58.747 36.000 0.00 0.00 0.00 3.02
134 135 6.723977 ACAACCCCTAAAATATTCAGCTCAAA 59.276 34.615 0.00 0.00 0.00 2.69
135 136 7.234577 ACAACCCCTAAAATATTCAGCTCAAAA 59.765 33.333 0.00 0.00 0.00 2.44
136 137 7.978099 ACCCCTAAAATATTCAGCTCAAAAT 57.022 32.000 0.00 0.00 0.00 1.82
137 138 8.379428 ACCCCTAAAATATTCAGCTCAAAATT 57.621 30.769 0.00 0.00 0.00 1.82
138 139 8.825774 ACCCCTAAAATATTCAGCTCAAAATTT 58.174 29.630 0.00 0.00 0.00 1.82
196 197 8.692110 TCAGATGTGAATAATGTCATTTTTGC 57.308 30.769 2.79 0.00 0.00 3.68
197 198 8.525316 TCAGATGTGAATAATGTCATTTTTGCT 58.475 29.630 2.79 0.00 0.00 3.91
198 199 9.146984 CAGATGTGAATAATGTCATTTTTGCTT 57.853 29.630 2.79 0.00 0.00 3.91
199 200 9.715121 AGATGTGAATAATGTCATTTTTGCTTT 57.285 25.926 2.79 0.00 0.00 3.51
202 203 9.107177 TGTGAATAATGTCATTTTTGCTTTTGT 57.893 25.926 2.79 0.00 0.00 2.83
203 204 9.584839 GTGAATAATGTCATTTTTGCTTTTGTC 57.415 29.630 2.79 0.00 0.00 3.18
204 205 9.545105 TGAATAATGTCATTTTTGCTTTTGTCT 57.455 25.926 2.79 0.00 0.00 3.41
207 208 9.768662 ATAATGTCATTTTTGCTTTTGTCTTCT 57.231 25.926 2.79 0.00 0.00 2.85
208 209 8.496707 AATGTCATTTTTGCTTTTGTCTTCTT 57.503 26.923 0.00 0.00 0.00 2.52
209 210 7.903995 TGTCATTTTTGCTTTTGTCTTCTTT 57.096 28.000 0.00 0.00 0.00 2.52
210 211 8.321650 TGTCATTTTTGCTTTTGTCTTCTTTT 57.678 26.923 0.00 0.00 0.00 2.27
211 212 8.229137 TGTCATTTTTGCTTTTGTCTTCTTTTG 58.771 29.630 0.00 0.00 0.00 2.44
212 213 8.442384 GTCATTTTTGCTTTTGTCTTCTTTTGA 58.558 29.630 0.00 0.00 0.00 2.69
213 214 8.442384 TCATTTTTGCTTTTGTCTTCTTTTGAC 58.558 29.630 0.00 0.00 35.21 3.18
214 215 7.721286 TTTTTGCTTTTGTCTTCTTTTGACA 57.279 28.000 0.00 0.00 41.94 3.58
215 216 6.704512 TTTGCTTTTGTCTTCTTTTGACAC 57.295 33.333 0.00 0.00 43.13 3.67
216 217 5.643379 TGCTTTTGTCTTCTTTTGACACT 57.357 34.783 0.00 0.00 43.13 3.55
217 218 6.751514 TGCTTTTGTCTTCTTTTGACACTA 57.248 33.333 0.00 0.00 43.13 2.74
218 219 7.333528 TGCTTTTGTCTTCTTTTGACACTAT 57.666 32.000 0.00 0.00 43.13 2.12
219 220 7.771183 TGCTTTTGTCTTCTTTTGACACTATT 58.229 30.769 0.00 0.00 43.13 1.73
220 221 7.915397 TGCTTTTGTCTTCTTTTGACACTATTC 59.085 33.333 0.00 0.00 43.13 1.75
221 222 7.915397 GCTTTTGTCTTCTTTTGACACTATTCA 59.085 33.333 0.00 0.00 43.13 2.57
222 223 9.956720 CTTTTGTCTTCTTTTGACACTATTCAT 57.043 29.630 0.00 0.00 43.13 2.57
223 224 9.734620 TTTTGTCTTCTTTTGACACTATTCATG 57.265 29.630 0.00 0.00 43.13 3.07
224 225 8.675705 TTGTCTTCTTTTGACACTATTCATGA 57.324 30.769 0.00 0.00 43.13 3.07
225 226 8.853077 TGTCTTCTTTTGACACTATTCATGAT 57.147 30.769 0.00 0.00 39.23 2.45
226 227 8.724229 TGTCTTCTTTTGACACTATTCATGATG 58.276 33.333 0.00 0.00 39.23 3.07
227 228 8.180267 GTCTTCTTTTGACACTATTCATGATGG 58.820 37.037 0.00 0.00 34.80 3.51
228 229 8.102676 TCTTCTTTTGACACTATTCATGATGGA 58.897 33.333 0.00 0.00 0.00 3.41
229 230 8.812513 TTCTTTTGACACTATTCATGATGGAT 57.187 30.769 0.00 0.00 0.00 3.41
230 231 8.812513 TCTTTTGACACTATTCATGATGGATT 57.187 30.769 0.00 0.00 0.00 3.01
231 232 9.246670 TCTTTTGACACTATTCATGATGGATTT 57.753 29.630 0.00 0.00 0.00 2.17
232 233 9.297586 CTTTTGACACTATTCATGATGGATTTG 57.702 33.333 0.00 0.00 0.00 2.32
233 234 7.943079 TTGACACTATTCATGATGGATTTGT 57.057 32.000 0.00 0.00 0.00 2.83
234 235 7.558161 TGACACTATTCATGATGGATTTGTC 57.442 36.000 15.95 15.95 0.00 3.18
235 236 7.341030 TGACACTATTCATGATGGATTTGTCT 58.659 34.615 20.28 0.57 32.63 3.41
236 237 7.830697 TGACACTATTCATGATGGATTTGTCTT 59.169 33.333 20.28 1.99 32.63 3.01
237 238 8.585471 ACACTATTCATGATGGATTTGTCTTT 57.415 30.769 0.00 0.00 0.00 2.52
238 239 9.028284 ACACTATTCATGATGGATTTGTCTTTT 57.972 29.630 0.00 0.00 0.00 2.27
239 240 9.865321 CACTATTCATGATGGATTTGTCTTTTT 57.135 29.630 0.00 0.00 0.00 1.94
271 272 9.860898 CTCTATGTATATGTCGAATTTGGATCA 57.139 33.333 0.00 0.00 0.00 2.92
272 273 9.860898 TCTATGTATATGTCGAATTTGGATCAG 57.139 33.333 0.00 0.00 0.00 2.90
273 274 9.860898 CTATGTATATGTCGAATTTGGATCAGA 57.139 33.333 0.00 0.00 0.00 3.27
275 276 9.730705 ATGTATATGTCGAATTTGGATCAGATT 57.269 29.630 0.00 0.00 0.00 2.40
283 284 9.884465 GTCGAATTTGGATCAGATTATTTTAGG 57.116 33.333 0.00 0.00 0.00 2.69
284 285 9.066892 TCGAATTTGGATCAGATTATTTTAGGG 57.933 33.333 0.00 0.00 0.00 3.53
285 286 8.299570 CGAATTTGGATCAGATTATTTTAGGGG 58.700 37.037 0.00 0.00 0.00 4.79
286 287 9.147732 GAATTTGGATCAGATTATTTTAGGGGT 57.852 33.333 0.00 0.00 0.00 4.95
287 288 9.506042 AATTTGGATCAGATTATTTTAGGGGTT 57.494 29.630 0.00 0.00 0.00 4.11
288 289 7.896383 TTGGATCAGATTATTTTAGGGGTTG 57.104 36.000 0.00 0.00 0.00 3.77
289 290 6.980577 TGGATCAGATTATTTTAGGGGTTGT 58.019 36.000 0.00 0.00 0.00 3.32
290 291 7.060421 TGGATCAGATTATTTTAGGGGTTGTC 58.940 38.462 0.00 0.00 0.00 3.18
291 292 6.204882 GGATCAGATTATTTTAGGGGTTGTCG 59.795 42.308 0.00 0.00 0.00 4.35
292 293 6.302535 TCAGATTATTTTAGGGGTTGTCGA 57.697 37.500 0.00 0.00 0.00 4.20
293 294 6.110707 TCAGATTATTTTAGGGGTTGTCGAC 58.889 40.000 9.11 9.11 0.00 4.20
294 295 5.878116 CAGATTATTTTAGGGGTTGTCGACA 59.122 40.000 15.76 15.76 0.00 4.35
295 296 6.542370 CAGATTATTTTAGGGGTTGTCGACAT 59.458 38.462 20.80 6.45 0.00 3.06
296 297 7.713507 CAGATTATTTTAGGGGTTGTCGACATA 59.286 37.037 20.80 5.32 0.00 2.29
297 298 7.713942 AGATTATTTTAGGGGTTGTCGACATAC 59.286 37.037 20.80 18.59 0.00 2.39
298 299 4.620589 TTTTAGGGGTTGTCGACATACA 57.379 40.909 20.80 0.76 0.00 2.29
299 300 4.829872 TTTAGGGGTTGTCGACATACAT 57.170 40.909 20.80 12.50 0.00 2.29
300 301 2.691409 AGGGGTTGTCGACATACATG 57.309 50.000 20.80 0.00 0.00 3.21
301 302 1.906574 AGGGGTTGTCGACATACATGT 59.093 47.619 20.80 2.69 45.16 3.21
316 317 6.829849 ACATACATGTCATGTACATCCATGA 58.170 36.000 32.23 22.50 46.15 3.07
390 391 9.565090 TGATATCATGAAAGCATATATAAGGGC 57.435 33.333 0.00 0.00 32.27 5.19
391 392 9.790344 GATATCATGAAAGCATATATAAGGGCT 57.210 33.333 0.00 2.17 38.45 5.19
392 393 9.790344 ATATCATGAAAGCATATATAAGGGCTC 57.210 33.333 0.00 0.00 35.11 4.70
393 394 6.108687 TCATGAAAGCATATATAAGGGCTCG 58.891 40.000 0.00 0.00 35.11 5.03
394 395 5.483685 TGAAAGCATATATAAGGGCTCGT 57.516 39.130 7.21 0.00 35.11 4.18
395 396 6.599356 TGAAAGCATATATAAGGGCTCGTA 57.401 37.500 7.21 0.00 35.11 3.43
396 397 6.631016 TGAAAGCATATATAAGGGCTCGTAG 58.369 40.000 7.21 0.00 35.11 3.51
397 398 4.657436 AGCATATATAAGGGCTCGTAGC 57.343 45.455 2.17 0.00 41.46 3.58
398 399 4.023980 AGCATATATAAGGGCTCGTAGCA 58.976 43.478 8.71 0.00 44.75 3.49
405 406 1.227292 GGGCTCGTAGCACCTAAGC 60.227 63.158 8.71 0.00 44.75 3.09
406 407 1.589196 GGCTCGTAGCACCTAAGCG 60.589 63.158 8.71 0.00 44.75 4.68
407 408 2.231618 GCTCGTAGCACCTAAGCGC 61.232 63.158 0.00 0.00 41.89 5.92
408 409 1.138883 CTCGTAGCACCTAAGCGCA 59.861 57.895 11.47 0.00 40.15 6.09
409 410 0.249073 CTCGTAGCACCTAAGCGCAT 60.249 55.000 11.47 0.00 40.15 4.73
410 411 0.527600 TCGTAGCACCTAAGCGCATG 60.528 55.000 11.47 0.20 40.15 4.06
411 412 0.806102 CGTAGCACCTAAGCGCATGT 60.806 55.000 11.47 0.00 40.15 3.21
412 413 1.369625 GTAGCACCTAAGCGCATGTT 58.630 50.000 11.47 0.00 40.15 2.71
413 414 1.327764 GTAGCACCTAAGCGCATGTTC 59.672 52.381 11.47 0.00 40.15 3.18
414 415 1.060937 GCACCTAAGCGCATGTTCG 59.939 57.895 11.47 0.00 0.00 3.95
415 416 1.715585 CACCTAAGCGCATGTTCGG 59.284 57.895 11.47 3.25 0.00 4.30
416 417 2.106683 ACCTAAGCGCATGTTCGGC 61.107 57.895 11.47 0.00 0.00 5.54
417 418 2.709475 CTAAGCGCATGTTCGGCC 59.291 61.111 11.47 0.00 0.00 6.13
418 419 3.155470 CTAAGCGCATGTTCGGCCG 62.155 63.158 22.12 22.12 0.00 6.13
423 424 3.567797 GCATGTTCGGCCGCTCTC 61.568 66.667 23.51 10.89 0.00 3.20
424 425 2.892425 CATGTTCGGCCGCTCTCC 60.892 66.667 23.51 6.33 0.00 3.71
457 458 2.435938 CGGAGCGCCCTTTTAGCA 60.436 61.111 2.29 0.00 0.00 3.49
458 459 2.464459 CGGAGCGCCCTTTTAGCAG 61.464 63.158 2.29 0.00 0.00 4.24
459 460 2.765356 GGAGCGCCCTTTTAGCAGC 61.765 63.158 2.29 0.00 0.00 5.25
460 461 1.746991 GAGCGCCCTTTTAGCAGCT 60.747 57.895 2.29 0.00 40.82 4.24
461 462 1.710103 GAGCGCCCTTTTAGCAGCTC 61.710 60.000 2.29 11.59 43.78 4.09
462 463 1.746991 GCGCCCTTTTAGCAGCTCT 60.747 57.895 0.00 0.00 0.00 4.09
463 464 1.986575 GCGCCCTTTTAGCAGCTCTG 61.987 60.000 0.00 0.00 0.00 3.35
489 490 0.747283 CCCTGCTTCATGGTCAGAGC 60.747 60.000 10.10 0.00 0.00 4.09
537 538 3.433957 ACAATAACGCATGTACGCAGAAA 59.566 39.130 0.00 0.00 36.19 2.52
538 539 3.925688 ATAACGCATGTACGCAGAAAG 57.074 42.857 0.00 0.00 36.19 2.62
540 541 1.068474 ACGCATGTACGCAGAAAGAC 58.932 50.000 0.00 0.00 36.19 3.01
541 542 0.370273 CGCATGTACGCAGAAAGACC 59.630 55.000 0.00 0.00 0.00 3.85
542 543 1.726853 GCATGTACGCAGAAAGACCT 58.273 50.000 0.00 0.00 0.00 3.85
543 544 2.076863 GCATGTACGCAGAAAGACCTT 58.923 47.619 0.00 0.00 0.00 3.50
544 545 2.159653 GCATGTACGCAGAAAGACCTTG 60.160 50.000 0.00 0.00 0.00 3.61
545 546 2.163818 TGTACGCAGAAAGACCTTGG 57.836 50.000 0.00 0.00 0.00 3.61
546 547 1.414919 TGTACGCAGAAAGACCTTGGT 59.585 47.619 0.00 0.00 0.00 3.67
560 727 6.002653 AGACCTTGGTGATAGGGTATTTTC 57.997 41.667 0.00 0.00 37.09 2.29
571 738 7.122055 GTGATAGGGTATTTTCCATGTCAAACA 59.878 37.037 0.00 0.00 40.01 2.83
606 773 1.227556 CGAATCCTACCGCCAAGGG 60.228 63.158 0.00 0.00 46.96 3.95
653 820 0.863799 CATCATCAACCTCGGCGATG 59.136 55.000 11.27 10.94 38.29 3.84
660 827 0.034477 AACCTCGGCGATGGGAAAAT 60.034 50.000 20.49 1.68 0.00 1.82
708 877 3.304458 CCGGGATTAAATTCGGCTTAAGC 60.304 47.826 19.53 19.53 35.95 3.09
728 897 2.034926 GCTTCGCAAAAAGGTCAAAACG 60.035 45.455 0.00 0.00 0.00 3.60
752 921 1.255882 AATTGGCCGTTGAATGCAGA 58.744 45.000 0.00 0.00 0.00 4.26
871 1040 4.774726 TGCCATTCCCAGCACTTTTTAATA 59.225 37.500 0.00 0.00 33.08 0.98
874 1043 5.105917 CCATTCCCAGCACTTTTTAATACGT 60.106 40.000 0.00 0.00 0.00 3.57
912 1081 2.009774 CCAACCATTGTCGTCCAGATC 58.990 52.381 0.00 0.00 0.00 2.75
939 1108 2.752238 CCAGGACGTCCGCTCTCT 60.752 66.667 28.26 7.51 42.08 3.10
982 1151 2.017049 CCTCCTTCGTTAAATGGCAGG 58.983 52.381 0.00 0.00 0.00 4.85
984 1153 1.353022 TCCTTCGTTAAATGGCAGGGT 59.647 47.619 0.00 0.00 0.00 4.34
1017 1186 2.719739 AGCAGACATACATGCAAAGCT 58.280 42.857 0.00 0.00 45.01 3.74
1029 1198 1.597797 GCAAAGCTGCCATGGCTACA 61.598 55.000 35.53 16.53 43.26 2.74
1053 1222 1.201429 ACATGTTCCTCGGCCTCCTT 61.201 55.000 0.00 0.00 0.00 3.36
1098 1291 3.302480 GCATAGCCACAAAAGACGATACG 60.302 47.826 0.00 0.00 0.00 3.06
1149 1342 0.322975 ACAAGCTCGTCTCCAGCAAT 59.677 50.000 0.00 0.00 39.56 3.56
1159 1352 1.202915 TCTCCAGCAATGGCAAGTTCA 60.203 47.619 0.00 0.00 44.61 3.18
1241 1437 3.214328 GGTACCTTGCCATATGGTTCAG 58.786 50.000 22.79 14.99 37.87 3.02
1254 1450 3.159213 TGGTTCAGCAAGATCCATGTT 57.841 42.857 5.22 0.00 40.39 2.71
1367 1563 2.485903 TGTCGTCTTAAACAACGCCAT 58.514 42.857 0.00 0.00 38.72 4.40
1582 1817 1.150536 GGCTGGAACAAGGTCACCA 59.849 57.895 0.00 0.00 38.70 4.17
1959 2203 0.108138 GCATCTACGTCAACCCAGCT 60.108 55.000 0.00 0.00 0.00 4.24
1998 2242 4.681978 GCCTGCGGACCGTTCACT 62.682 66.667 16.73 0.00 0.00 3.41
2425 2699 4.837896 AGTAAAAGAAAACCAGCAGCTC 57.162 40.909 0.00 0.00 0.00 4.09
2470 2744 0.958091 CGGTTTTGGGTTGCTGATGA 59.042 50.000 0.00 0.00 0.00 2.92
2484 2758 3.139850 GCTGATGATCATGCTGCTACTT 58.860 45.455 14.30 0.00 0.00 2.24
2528 2802 2.027192 ACTGGTGTGGTATGTCATCACC 60.027 50.000 12.44 12.44 45.83 4.02
2571 2848 6.151144 GTGTTGGAGTTGTTGCCTTTAGATAT 59.849 38.462 0.00 0.00 0.00 1.63
2634 2911 0.110486 GAGCAGGAGGTTTTGGGACA 59.890 55.000 0.00 0.00 0.00 4.02
2658 2935 9.503399 ACAGTATTTAAGGGAGTTTTAAGTGAG 57.497 33.333 0.00 0.00 0.00 3.51
2818 3098 3.198068 AGGCTGCTTGTATATGAACACG 58.802 45.455 0.00 0.00 0.00 4.49
2955 3247 0.931662 GTTGCCGCGAATGCATCATC 60.932 55.000 8.23 0.00 42.97 2.92
2973 3265 3.713248 TCATCCACTGTGATATCAAGCCT 59.287 43.478 7.07 0.00 0.00 4.58
3129 3421 1.768870 AGCGGGGTTGCTATTACATCT 59.231 47.619 0.00 0.00 45.14 2.90
3192 3484 3.648067 TCATATCGGGAAGAAGGAATGCT 59.352 43.478 0.00 0.00 0.00 3.79
3215 3510 0.877071 GTTGTGCACACTAGCAGCAT 59.123 50.000 21.56 0.00 46.69 3.79
3488 3789 6.432162 ACAACATAATGCTCTGATGTCACTTT 59.568 34.615 0.00 0.00 32.67 2.66
3542 3843 4.324267 ACGCTACCTTTATTTGCTTCAGT 58.676 39.130 0.00 0.00 0.00 3.41
3559 3860 8.402798 TGCTTCAGTAAATTTTATGGTTCTCA 57.597 30.769 0.00 0.00 0.00 3.27
3687 4004 2.060326 TCTCGTTTGGAGCGTGTAAG 57.940 50.000 0.00 0.00 42.82 2.34
3688 4005 1.068474 CTCGTTTGGAGCGTGTAAGG 58.932 55.000 0.00 0.00 35.63 2.69
3697 4014 3.220447 GCGTGTAAGGCCTTGTACA 57.780 52.632 28.77 21.76 43.00 2.90
3698 4015 1.515081 GCGTGTAAGGCCTTGTACAA 58.485 50.000 28.77 8.28 43.00 2.41
3699 4016 2.081462 GCGTGTAAGGCCTTGTACAAT 58.919 47.619 28.77 1.45 43.00 2.71
3700 4017 2.159572 GCGTGTAAGGCCTTGTACAATG 60.160 50.000 28.77 19.60 43.00 2.82
3701 4018 2.418628 CGTGTAAGGCCTTGTACAATGG 59.581 50.000 28.77 13.25 32.23 3.16
3702 4019 2.752903 GTGTAAGGCCTTGTACAATGGG 59.247 50.000 28.77 14.91 32.23 4.00
3703 4020 2.645297 TGTAAGGCCTTGTACAATGGGA 59.355 45.455 28.77 0.00 0.00 4.37
3704 4021 2.514458 AAGGCCTTGTACAATGGGAG 57.486 50.000 19.73 1.65 0.00 4.30
3705 4022 0.625849 AGGCCTTGTACAATGGGAGG 59.374 55.000 16.08 11.34 0.00 4.30
3706 4023 0.331616 GGCCTTGTACAATGGGAGGT 59.668 55.000 16.08 0.00 0.00 3.85
3707 4024 1.463674 GCCTTGTACAATGGGAGGTG 58.536 55.000 16.08 0.00 0.00 4.00
3708 4025 1.463674 CCTTGTACAATGGGAGGTGC 58.536 55.000 9.13 0.00 0.00 5.01
3709 4026 1.004745 CCTTGTACAATGGGAGGTGCT 59.995 52.381 9.13 0.00 0.00 4.40
3710 4027 2.555227 CCTTGTACAATGGGAGGTGCTT 60.555 50.000 9.13 0.00 0.00 3.91
3711 4028 3.308117 CCTTGTACAATGGGAGGTGCTTA 60.308 47.826 9.13 0.00 0.00 3.09
3712 4029 3.627395 TGTACAATGGGAGGTGCTTAG 57.373 47.619 0.00 0.00 0.00 2.18
3713 4030 3.178046 TGTACAATGGGAGGTGCTTAGA 58.822 45.455 0.00 0.00 0.00 2.10
3714 4031 3.197766 TGTACAATGGGAGGTGCTTAGAG 59.802 47.826 0.00 0.00 0.00 2.43
3715 4032 2.551270 ACAATGGGAGGTGCTTAGAGA 58.449 47.619 0.00 0.00 0.00 3.10
3716 4033 2.503356 ACAATGGGAGGTGCTTAGAGAG 59.497 50.000 0.00 0.00 0.00 3.20
3717 4034 2.768527 CAATGGGAGGTGCTTAGAGAGA 59.231 50.000 0.00 0.00 0.00 3.10
3718 4035 2.856760 TGGGAGGTGCTTAGAGAGAT 57.143 50.000 0.00 0.00 0.00 2.75
3719 4036 2.392662 TGGGAGGTGCTTAGAGAGATG 58.607 52.381 0.00 0.00 0.00 2.90
3720 4037 1.069978 GGGAGGTGCTTAGAGAGATGC 59.930 57.143 0.00 0.00 0.00 3.91
3721 4038 2.038659 GGAGGTGCTTAGAGAGATGCT 58.961 52.381 0.00 0.00 0.00 3.79
3722 4039 2.433970 GGAGGTGCTTAGAGAGATGCTT 59.566 50.000 0.00 0.00 0.00 3.91
3723 4040 3.639094 GGAGGTGCTTAGAGAGATGCTTA 59.361 47.826 0.00 0.00 0.00 3.09
3724 4041 4.261994 GGAGGTGCTTAGAGAGATGCTTAG 60.262 50.000 0.00 0.00 0.00 2.18
3725 4042 4.541705 AGGTGCTTAGAGAGATGCTTAGA 58.458 43.478 0.00 0.00 0.00 2.10
3726 4043 4.959210 AGGTGCTTAGAGAGATGCTTAGAA 59.041 41.667 0.00 0.00 0.00 2.10
3727 4044 5.423610 AGGTGCTTAGAGAGATGCTTAGAAA 59.576 40.000 0.00 0.00 0.00 2.52
3728 4045 6.070538 AGGTGCTTAGAGAGATGCTTAGAAAA 60.071 38.462 0.00 0.00 0.00 2.29
3729 4046 6.595716 GGTGCTTAGAGAGATGCTTAGAAAAA 59.404 38.462 0.00 0.00 0.00 1.94
3730 4047 7.281999 GGTGCTTAGAGAGATGCTTAGAAAAAT 59.718 37.037 0.00 0.00 0.00 1.82
3731 4048 9.319143 GTGCTTAGAGAGATGCTTAGAAAAATA 57.681 33.333 0.00 0.00 0.00 1.40
3732 4049 9.890629 TGCTTAGAGAGATGCTTAGAAAAATAA 57.109 29.630 0.00 0.00 0.00 1.40
3736 4053 8.202745 AGAGAGATGCTTAGAAAAATAAACCG 57.797 34.615 0.00 0.00 0.00 4.44
3737 4054 7.281100 AGAGAGATGCTTAGAAAAATAAACCGG 59.719 37.037 0.00 0.00 0.00 5.28
3738 4055 6.318900 AGAGATGCTTAGAAAAATAAACCGGG 59.681 38.462 6.32 0.00 0.00 5.73
3739 4056 5.949952 AGATGCTTAGAAAAATAAACCGGGT 59.050 36.000 6.32 0.00 0.00 5.28
3740 4057 6.436218 AGATGCTTAGAAAAATAAACCGGGTT 59.564 34.615 10.96 10.96 0.00 4.11
3741 4058 6.408107 TGCTTAGAAAAATAAACCGGGTTT 57.592 33.333 26.79 26.79 39.24 3.27
3742 4059 6.818233 TGCTTAGAAAAATAAACCGGGTTTT 58.182 32.000 28.50 11.74 37.01 2.43
3743 4060 7.273712 TGCTTAGAAAAATAAACCGGGTTTTT 58.726 30.769 28.50 18.85 37.01 1.94
3744 4061 7.438757 TGCTTAGAAAAATAAACCGGGTTTTTC 59.561 33.333 28.50 23.47 45.36 2.29
3748 4065 7.773864 GAAAAATAAACCGGGTTTTTCTGAA 57.226 32.000 28.50 11.38 43.37 3.02
3749 4066 7.780008 AAAAATAAACCGGGTTTTTCTGAAG 57.220 32.000 28.50 0.00 37.01 3.02
3750 4067 2.882927 AAACCGGGTTTTTCTGAAGC 57.117 45.000 19.22 0.00 31.10 3.86
3751 4068 1.770294 AACCGGGTTTTTCTGAAGCA 58.230 45.000 6.59 0.00 0.00 3.91
3752 4069 1.029681 ACCGGGTTTTTCTGAAGCAC 58.970 50.000 6.32 0.00 0.00 4.40
3753 4070 0.313987 CCGGGTTTTTCTGAAGCACC 59.686 55.000 10.25 10.25 0.00 5.01
3754 4071 0.040425 CGGGTTTTTCTGAAGCACCG 60.040 55.000 11.74 10.55 0.00 4.94
3755 4072 0.313987 GGGTTTTTCTGAAGCACCGG 59.686 55.000 0.00 0.00 0.00 5.28
3756 4073 1.029681 GGTTTTTCTGAAGCACCGGT 58.970 50.000 0.00 0.00 0.00 5.28
3757 4074 1.269051 GGTTTTTCTGAAGCACCGGTG 60.269 52.381 30.66 30.66 0.00 4.94
3769 4086 2.684001 CACCGGTGCCTATTTCTACA 57.316 50.000 24.02 0.00 0.00 2.74
3770 4087 2.550978 CACCGGTGCCTATTTCTACAG 58.449 52.381 24.02 0.00 0.00 2.74
3771 4088 1.485066 ACCGGTGCCTATTTCTACAGG 59.515 52.381 6.12 0.00 35.04 4.00
3772 4089 1.760613 CCGGTGCCTATTTCTACAGGA 59.239 52.381 0.00 0.00 33.42 3.86
3773 4090 2.224066 CCGGTGCCTATTTCTACAGGAG 60.224 54.545 0.00 0.00 33.42 3.69
3774 4091 2.693591 CGGTGCCTATTTCTACAGGAGA 59.306 50.000 0.00 0.00 33.42 3.71
3775 4092 3.243569 CGGTGCCTATTTCTACAGGAGAG 60.244 52.174 0.00 0.00 34.93 3.20
3776 4093 3.961408 GGTGCCTATTTCTACAGGAGAGA 59.039 47.826 0.00 0.00 34.93 3.10
3777 4094 4.202172 GGTGCCTATTTCTACAGGAGAGAC 60.202 50.000 0.00 0.00 34.93 3.36
3778 4095 3.632604 TGCCTATTTCTACAGGAGAGACG 59.367 47.826 0.00 0.00 34.93 4.18
3779 4096 3.551250 GCCTATTTCTACAGGAGAGACGC 60.551 52.174 0.00 0.00 34.93 5.19
3780 4097 3.886505 CCTATTTCTACAGGAGAGACGCT 59.113 47.826 0.00 0.00 34.93 5.07
3781 4098 4.339814 CCTATTTCTACAGGAGAGACGCTT 59.660 45.833 0.00 0.00 34.93 4.68
3782 4099 5.531659 CCTATTTCTACAGGAGAGACGCTTA 59.468 44.000 0.00 0.00 34.93 3.09
3783 4100 4.966965 TTTCTACAGGAGAGACGCTTAG 57.033 45.455 0.00 0.00 34.93 2.18
3784 4101 3.630892 TCTACAGGAGAGACGCTTAGT 57.369 47.619 0.00 0.00 0.00 2.24
3785 4102 3.952931 TCTACAGGAGAGACGCTTAGTT 58.047 45.455 0.00 0.00 0.00 2.24
3786 4103 5.095145 TCTACAGGAGAGACGCTTAGTTA 57.905 43.478 0.00 0.00 0.00 2.24
3787 4104 5.494724 TCTACAGGAGAGACGCTTAGTTAA 58.505 41.667 0.00 0.00 0.00 2.01
3788 4105 4.705337 ACAGGAGAGACGCTTAGTTAAG 57.295 45.455 0.00 0.00 36.40 1.85
3789 4106 9.223557 TTCTACAGGAGAGACGCTTAGTTAAGC 62.224 44.444 12.72 12.72 44.08 3.09
3803 4120 7.024340 CTTAGTTAAGCGTCTATCCTGTACA 57.976 40.000 0.00 0.00 0.00 2.90
3804 4121 5.909621 AGTTAAGCGTCTATCCTGTACAA 57.090 39.130 0.00 0.00 0.00 2.41
3805 4122 6.276832 AGTTAAGCGTCTATCCTGTACAAA 57.723 37.500 0.00 0.00 0.00 2.83
3806 4123 6.875076 AGTTAAGCGTCTATCCTGTACAAAT 58.125 36.000 0.00 0.00 0.00 2.32
3807 4124 8.004087 AGTTAAGCGTCTATCCTGTACAAATA 57.996 34.615 0.00 0.00 0.00 1.40
3808 4125 8.472413 AGTTAAGCGTCTATCCTGTACAAATAA 58.528 33.333 0.00 0.00 0.00 1.40
3809 4126 8.753175 GTTAAGCGTCTATCCTGTACAAATAAG 58.247 37.037 0.00 0.00 0.00 1.73
3810 4127 5.290386 AGCGTCTATCCTGTACAAATAAGC 58.710 41.667 0.00 4.79 0.00 3.09
3811 4128 5.047847 GCGTCTATCCTGTACAAATAAGCA 58.952 41.667 0.00 0.00 0.00 3.91
3812 4129 5.050972 GCGTCTATCCTGTACAAATAAGCAC 60.051 44.000 0.00 0.00 0.00 4.40
3813 4130 5.462398 CGTCTATCCTGTACAAATAAGCACC 59.538 44.000 0.00 0.00 0.00 5.01
3814 4131 5.462398 GTCTATCCTGTACAAATAAGCACCG 59.538 44.000 0.00 0.00 0.00 4.94
3815 4132 2.980568 TCCTGTACAAATAAGCACCGG 58.019 47.619 0.00 0.00 0.00 5.28
3816 4133 2.303600 TCCTGTACAAATAAGCACCGGT 59.696 45.455 0.00 0.00 0.00 5.28
3817 4134 2.418628 CCTGTACAAATAAGCACCGGTG 59.581 50.000 30.66 30.66 0.00 4.94
3829 4146 2.331809 CACCGGTGCTTAAGAAAAGC 57.668 50.000 24.02 2.81 43.29 3.51
3830 4147 1.068541 CACCGGTGCTTAAGAAAAGCC 60.069 52.381 24.02 0.00 42.36 4.35
3831 4148 1.202891 ACCGGTGCTTAAGAAAAGCCT 60.203 47.619 6.12 0.00 42.36 4.58
3832 4149 1.200020 CCGGTGCTTAAGAAAAGCCTG 59.800 52.381 6.67 4.28 42.36 4.85
3833 4150 1.200020 CGGTGCTTAAGAAAAGCCTGG 59.800 52.381 6.67 0.00 42.36 4.45
3834 4151 2.239400 GGTGCTTAAGAAAAGCCTGGT 58.761 47.619 6.67 0.00 42.36 4.00
3835 4152 2.628178 GGTGCTTAAGAAAAGCCTGGTT 59.372 45.455 6.67 0.00 42.36 3.67
3836 4153 3.069586 GGTGCTTAAGAAAAGCCTGGTTT 59.930 43.478 6.67 0.00 42.36 3.27
3837 4154 4.279922 GGTGCTTAAGAAAAGCCTGGTTTA 59.720 41.667 6.67 0.00 42.36 2.01
3838 4155 5.047306 GGTGCTTAAGAAAAGCCTGGTTTAT 60.047 40.000 6.67 0.00 42.36 1.40
3839 4156 6.455647 GTGCTTAAGAAAAGCCTGGTTTATT 58.544 36.000 6.67 0.00 42.36 1.40
3840 4157 6.929049 GTGCTTAAGAAAAGCCTGGTTTATTT 59.071 34.615 6.67 0.00 42.36 1.40
3841 4158 7.116376 GTGCTTAAGAAAAGCCTGGTTTATTTC 59.884 37.037 6.67 0.00 42.36 2.17
3842 4159 7.015195 TGCTTAAGAAAAGCCTGGTTTATTTCT 59.985 33.333 6.67 4.86 42.36 2.52
3843 4160 7.542477 GCTTAAGAAAAGCCTGGTTTATTTCTC 59.458 37.037 6.67 0.00 38.89 2.87
3844 4161 8.706322 TTAAGAAAAGCCTGGTTTATTTCTCT 57.294 30.769 9.69 5.01 38.89 3.10
3845 4162 9.802039 TTAAGAAAAGCCTGGTTTATTTCTCTA 57.198 29.630 9.69 4.33 38.89 2.43
3846 4163 8.706322 AAGAAAAGCCTGGTTTATTTCTCTAA 57.294 30.769 9.69 0.00 38.89 2.10
3847 4164 8.341892 AGAAAAGCCTGGTTTATTTCTCTAAG 57.658 34.615 4.86 0.00 35.96 2.18
3848 4165 6.516739 AAAGCCTGGTTTATTTCTCTAAGC 57.483 37.500 0.00 0.00 0.00 3.09
3849 4166 5.179452 AGCCTGGTTTATTTCTCTAAGCA 57.821 39.130 0.00 0.00 0.00 3.91
3850 4167 4.944317 AGCCTGGTTTATTTCTCTAAGCAC 59.056 41.667 0.00 0.00 0.00 4.40
3851 4168 4.096532 GCCTGGTTTATTTCTCTAAGCACC 59.903 45.833 0.00 0.00 0.00 5.01
3852 4169 5.501156 CCTGGTTTATTTCTCTAAGCACCT 58.499 41.667 0.00 0.00 0.00 4.00
3853 4170 5.586643 CCTGGTTTATTTCTCTAAGCACCTC 59.413 44.000 0.00 0.00 0.00 3.85
3854 4171 5.497474 TGGTTTATTTCTCTAAGCACCTCC 58.503 41.667 0.00 0.00 0.00 4.30
3855 4172 4.882427 GGTTTATTTCTCTAAGCACCTCCC 59.118 45.833 0.00 0.00 0.00 4.30
3856 4173 4.772886 TTATTTCTCTAAGCACCTCCCC 57.227 45.455 0.00 0.00 0.00 4.81
3857 4174 2.344093 TTTCTCTAAGCACCTCCCCT 57.656 50.000 0.00 0.00 0.00 4.79
3858 4175 3.484953 TTTCTCTAAGCACCTCCCCTA 57.515 47.619 0.00 0.00 0.00 3.53
3859 4176 3.484953 TTCTCTAAGCACCTCCCCTAA 57.515 47.619 0.00 0.00 0.00 2.69
3860 4177 3.033659 TCTCTAAGCACCTCCCCTAAG 57.966 52.381 0.00 0.00 0.00 2.18
3861 4178 1.414550 CTCTAAGCACCTCCCCTAAGC 59.585 57.143 0.00 0.00 0.00 3.09
3862 4179 1.204146 CTAAGCACCTCCCCTAAGCA 58.796 55.000 0.00 0.00 0.00 3.91
3863 4180 0.909623 TAAGCACCTCCCCTAAGCAC 59.090 55.000 0.00 0.00 0.00 4.40
3864 4181 1.853250 AAGCACCTCCCCTAAGCACC 61.853 60.000 0.00 0.00 0.00 5.01
3865 4182 2.301738 GCACCTCCCCTAAGCACCT 61.302 63.158 0.00 0.00 0.00 4.00
3866 4183 1.853250 GCACCTCCCCTAAGCACCTT 61.853 60.000 0.00 0.00 0.00 3.50
3867 4184 0.253327 CACCTCCCCTAAGCACCTTC 59.747 60.000 0.00 0.00 0.00 3.46
3868 4185 0.914902 ACCTCCCCTAAGCACCTTCC 60.915 60.000 0.00 0.00 0.00 3.46
3869 4186 0.914417 CCTCCCCTAAGCACCTTCCA 60.914 60.000 0.00 0.00 0.00 3.53
3870 4187 1.216990 CTCCCCTAAGCACCTTCCAT 58.783 55.000 0.00 0.00 0.00 3.41
3871 4188 1.566231 CTCCCCTAAGCACCTTCCATT 59.434 52.381 0.00 0.00 0.00 3.16
3872 4189 1.284785 TCCCCTAAGCACCTTCCATTG 59.715 52.381 0.00 0.00 0.00 2.82
3873 4190 1.005924 CCCCTAAGCACCTTCCATTGT 59.994 52.381 0.00 0.00 0.00 2.71
3874 4191 2.241176 CCCCTAAGCACCTTCCATTGTA 59.759 50.000 0.00 0.00 0.00 2.41
3875 4192 3.279434 CCCTAAGCACCTTCCATTGTAC 58.721 50.000 0.00 0.00 0.00 2.90
3876 4193 3.308117 CCCTAAGCACCTTCCATTGTACA 60.308 47.826 0.00 0.00 0.00 2.90
3877 4194 4.331968 CCTAAGCACCTTCCATTGTACAA 58.668 43.478 11.41 11.41 0.00 2.41
3878 4195 4.396166 CCTAAGCACCTTCCATTGTACAAG 59.604 45.833 14.65 6.30 0.00 3.16
3879 4196 2.795329 AGCACCTTCCATTGTACAAGG 58.205 47.619 14.65 13.92 42.27 3.61
3880 4197 1.202348 GCACCTTCCATTGTACAAGGC 59.798 52.381 14.66 4.14 40.50 4.35
3881 4198 1.818674 CACCTTCCATTGTACAAGGCC 59.181 52.381 14.66 0.00 40.50 5.19
3882 4199 1.710809 ACCTTCCATTGTACAAGGCCT 59.289 47.619 14.66 0.00 40.50 5.19
3883 4200 2.916934 ACCTTCCATTGTACAAGGCCTA 59.083 45.455 14.66 0.00 40.50 3.93
3884 4201 3.332485 ACCTTCCATTGTACAAGGCCTAA 59.668 43.478 14.66 7.55 40.50 2.69
3897 4214 4.166919 ACAAGGCCTAATAGCTCAAGGATT 59.833 41.667 5.16 0.00 31.64 3.01
4234 4840 7.402811 TTTTCATCTAGTAACAACGTGACAG 57.597 36.000 0.00 0.00 0.00 3.51
4236 4842 3.293311 TCTAGTAACAACGTGACAGGC 57.707 47.619 0.00 0.00 0.00 4.85
4567 5175 5.874810 TCTGACATAGGAAAACAGGAATTCG 59.125 40.000 0.00 0.00 0.00 3.34
4922 5530 7.041721 CCAACTGTAAGAGCACATCTACAATA 58.958 38.462 0.00 0.00 37.23 1.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.443681 CACCTGATATTTTCCGGCAAACT 59.556 43.478 0.00 0.00 32.16 2.66
1 2 3.442273 TCACCTGATATTTTCCGGCAAAC 59.558 43.478 0.00 0.00 32.16 2.93
2 3 3.691575 TCACCTGATATTTTCCGGCAAA 58.308 40.909 0.63 0.63 32.16 3.68
3 4 3.358111 TCACCTGATATTTTCCGGCAA 57.642 42.857 0.00 0.00 32.16 4.52
4 5 3.576078 ATCACCTGATATTTTCCGGCA 57.424 42.857 0.00 0.00 32.16 5.69
5 6 3.751698 GGTATCACCTGATATTTTCCGGC 59.248 47.826 0.00 0.00 39.03 6.13
6 7 4.755123 GTGGTATCACCTGATATTTTCCGG 59.245 45.833 0.00 0.00 39.58 5.14
7 8 5.611374 AGTGGTATCACCTGATATTTTCCG 58.389 41.667 1.47 0.00 44.64 4.30
8 9 8.375506 TGATAGTGGTATCACCTGATATTTTCC 58.624 37.037 1.47 0.00 44.64 3.13
9 10 9.778741 TTGATAGTGGTATCACCTGATATTTTC 57.221 33.333 1.47 0.00 43.96 2.29
10 11 9.561069 GTTGATAGTGGTATCACCTGATATTTT 57.439 33.333 1.47 0.00 43.96 1.82
11 12 8.938883 AGTTGATAGTGGTATCACCTGATATTT 58.061 33.333 1.47 0.00 43.96 1.40
12 13 8.497910 AGTTGATAGTGGTATCACCTGATATT 57.502 34.615 1.47 0.00 43.96 1.28
13 14 8.497910 AAGTTGATAGTGGTATCACCTGATAT 57.502 34.615 1.47 0.00 43.96 1.63
14 15 7.914427 AAGTTGATAGTGGTATCACCTGATA 57.086 36.000 1.47 0.00 43.96 2.15
15 16 6.814954 AAGTTGATAGTGGTATCACCTGAT 57.185 37.500 1.47 0.00 43.96 2.90
16 17 7.727578 TTAAGTTGATAGTGGTATCACCTGA 57.272 36.000 1.47 0.00 43.96 3.86
17 18 8.786826 TTTTAAGTTGATAGTGGTATCACCTG 57.213 34.615 1.47 0.00 43.96 4.00
18 19 8.822805 TCTTTTAAGTTGATAGTGGTATCACCT 58.177 33.333 1.47 0.00 43.96 4.00
19 20 9.444600 TTCTTTTAAGTTGATAGTGGTATCACC 57.555 33.333 1.47 0.00 43.96 4.02
97 98 6.488769 TTTAGGGGTTGTCGACATATATGT 57.511 37.500 20.80 18.31 45.16 2.29
98 99 7.979444 ATTTTAGGGGTTGTCGACATATATG 57.021 36.000 20.80 11.29 0.00 1.78
100 101 9.715121 GAATATTTTAGGGGTTGTCGACATATA 57.285 33.333 20.80 0.76 0.00 0.86
101 102 8.215050 TGAATATTTTAGGGGTTGTCGACATAT 58.785 33.333 20.80 7.10 0.00 1.78
102 103 7.566569 TGAATATTTTAGGGGTTGTCGACATA 58.433 34.615 20.80 5.32 0.00 2.29
103 104 6.419791 TGAATATTTTAGGGGTTGTCGACAT 58.580 36.000 20.80 6.45 0.00 3.06
104 105 5.806818 TGAATATTTTAGGGGTTGTCGACA 58.193 37.500 15.76 15.76 0.00 4.35
105 106 5.220796 GCTGAATATTTTAGGGGTTGTCGAC 60.221 44.000 9.11 9.11 0.00 4.20
106 107 4.879545 GCTGAATATTTTAGGGGTTGTCGA 59.120 41.667 0.00 0.00 0.00 4.20
107 108 4.881850 AGCTGAATATTTTAGGGGTTGTCG 59.118 41.667 0.00 0.00 0.00 4.35
108 109 5.885912 TGAGCTGAATATTTTAGGGGTTGTC 59.114 40.000 0.00 0.00 0.00 3.18
109 110 5.826643 TGAGCTGAATATTTTAGGGGTTGT 58.173 37.500 0.00 0.00 0.00 3.32
110 111 6.773976 TTGAGCTGAATATTTTAGGGGTTG 57.226 37.500 0.00 0.00 0.00 3.77
111 112 7.790782 TTTTGAGCTGAATATTTTAGGGGTT 57.209 32.000 0.00 0.00 0.00 4.11
112 113 7.978099 ATTTTGAGCTGAATATTTTAGGGGT 57.022 32.000 0.00 0.00 0.00 4.95
163 164 9.234827 TGACATTATTCACATCTGAATTTGTCT 57.765 29.630 23.84 5.70 43.48 3.41
170 171 9.142515 GCAAAAATGACATTATTCACATCTGAA 57.857 29.630 0.00 0.00 40.77 3.02
171 172 8.525316 AGCAAAAATGACATTATTCACATCTGA 58.475 29.630 0.00 0.00 0.00 3.27
172 173 8.697846 AGCAAAAATGACATTATTCACATCTG 57.302 30.769 0.00 0.00 0.00 2.90
173 174 9.715121 AAAGCAAAAATGACATTATTCACATCT 57.285 25.926 0.00 0.00 0.00 2.90
176 177 9.107177 ACAAAAGCAAAAATGACATTATTCACA 57.893 25.926 0.00 0.00 0.00 3.58
177 178 9.584839 GACAAAAGCAAAAATGACATTATTCAC 57.415 29.630 0.00 0.00 0.00 3.18
178 179 9.545105 AGACAAAAGCAAAAATGACATTATTCA 57.455 25.926 0.00 0.00 0.00 2.57
181 182 9.768662 AGAAGACAAAAGCAAAAATGACATTAT 57.231 25.926 0.00 0.00 0.00 1.28
182 183 9.598517 AAGAAGACAAAAGCAAAAATGACATTA 57.401 25.926 0.00 0.00 0.00 1.90
183 184 8.496707 AAGAAGACAAAAGCAAAAATGACATT 57.503 26.923 0.00 0.00 0.00 2.71
184 185 8.496707 AAAGAAGACAAAAGCAAAAATGACAT 57.503 26.923 0.00 0.00 0.00 3.06
185 186 7.903995 AAAGAAGACAAAAGCAAAAATGACA 57.096 28.000 0.00 0.00 0.00 3.58
186 187 8.442384 TCAAAAGAAGACAAAAGCAAAAATGAC 58.558 29.630 0.00 0.00 0.00 3.06
187 188 8.442384 GTCAAAAGAAGACAAAAGCAAAAATGA 58.558 29.630 0.00 0.00 36.06 2.57
188 189 8.229137 TGTCAAAAGAAGACAAAAGCAAAAATG 58.771 29.630 0.00 0.00 42.57 2.32
189 190 8.229811 GTGTCAAAAGAAGACAAAAGCAAAAAT 58.770 29.630 0.00 0.00 46.50 1.82
190 191 7.440856 AGTGTCAAAAGAAGACAAAAGCAAAAA 59.559 29.630 0.00 0.00 46.50 1.94
191 192 6.928492 AGTGTCAAAAGAAGACAAAAGCAAAA 59.072 30.769 0.00 0.00 46.50 2.44
192 193 6.454795 AGTGTCAAAAGAAGACAAAAGCAAA 58.545 32.000 0.00 0.00 46.50 3.68
193 194 6.024552 AGTGTCAAAAGAAGACAAAAGCAA 57.975 33.333 0.00 0.00 46.50 3.91
194 195 5.643379 AGTGTCAAAAGAAGACAAAAGCA 57.357 34.783 0.00 0.00 46.50 3.91
195 196 7.915397 TGAATAGTGTCAAAAGAAGACAAAAGC 59.085 33.333 0.00 0.00 46.50 3.51
196 197 9.956720 ATGAATAGTGTCAAAAGAAGACAAAAG 57.043 29.630 0.00 0.00 46.50 2.27
197 198 9.734620 CATGAATAGTGTCAAAAGAAGACAAAA 57.265 29.630 0.00 0.00 46.50 2.44
198 199 9.119418 TCATGAATAGTGTCAAAAGAAGACAAA 57.881 29.630 0.00 0.00 46.50 2.83
199 200 8.675705 TCATGAATAGTGTCAAAAGAAGACAA 57.324 30.769 0.00 0.00 46.50 3.18
200 201 8.724229 CATCATGAATAGTGTCAAAAGAAGACA 58.276 33.333 0.00 0.00 43.23 3.41
201 202 8.180267 CCATCATGAATAGTGTCAAAAGAAGAC 58.820 37.037 0.00 0.00 36.55 3.01
202 203 8.102676 TCCATCATGAATAGTGTCAAAAGAAGA 58.897 33.333 0.00 0.00 0.00 2.87
203 204 8.272545 TCCATCATGAATAGTGTCAAAAGAAG 57.727 34.615 0.00 0.00 0.00 2.85
204 205 8.812513 ATCCATCATGAATAGTGTCAAAAGAA 57.187 30.769 0.00 0.00 0.00 2.52
205 206 8.812513 AATCCATCATGAATAGTGTCAAAAGA 57.187 30.769 0.00 0.00 0.00 2.52
206 207 9.297586 CAAATCCATCATGAATAGTGTCAAAAG 57.702 33.333 0.00 0.00 0.00 2.27
207 208 8.805175 ACAAATCCATCATGAATAGTGTCAAAA 58.195 29.630 0.00 0.00 0.00 2.44
208 209 8.352137 ACAAATCCATCATGAATAGTGTCAAA 57.648 30.769 0.00 0.00 0.00 2.69
209 210 7.830697 AGACAAATCCATCATGAATAGTGTCAA 59.169 33.333 20.36 0.00 35.29 3.18
210 211 7.341030 AGACAAATCCATCATGAATAGTGTCA 58.659 34.615 20.36 0.25 35.29 3.58
211 212 7.798596 AGACAAATCCATCATGAATAGTGTC 57.201 36.000 0.00 9.16 33.51 3.67
212 213 8.585471 AAAGACAAATCCATCATGAATAGTGT 57.415 30.769 0.00 0.00 0.00 3.55
213 214 9.865321 AAAAAGACAAATCCATCATGAATAGTG 57.135 29.630 0.00 0.00 0.00 2.74
245 246 9.860898 TGATCCAAATTCGACATATACATAGAG 57.139 33.333 0.00 0.00 0.00 2.43
246 247 9.860898 CTGATCCAAATTCGACATATACATAGA 57.139 33.333 0.00 0.00 0.00 1.98
247 248 9.860898 TCTGATCCAAATTCGACATATACATAG 57.139 33.333 0.00 0.00 0.00 2.23
249 250 9.730705 AATCTGATCCAAATTCGACATATACAT 57.269 29.630 0.00 0.00 0.00 2.29
257 258 9.884465 CCTAAAATAATCTGATCCAAATTCGAC 57.116 33.333 0.00 0.00 0.00 4.20
258 259 9.066892 CCCTAAAATAATCTGATCCAAATTCGA 57.933 33.333 0.00 0.00 0.00 3.71
259 260 8.299570 CCCCTAAAATAATCTGATCCAAATTCG 58.700 37.037 0.00 0.00 0.00 3.34
260 261 9.147732 ACCCCTAAAATAATCTGATCCAAATTC 57.852 33.333 0.00 0.00 0.00 2.17
261 262 9.506042 AACCCCTAAAATAATCTGATCCAAATT 57.494 29.630 0.00 0.00 0.00 1.82
262 263 8.927411 CAACCCCTAAAATAATCTGATCCAAAT 58.073 33.333 0.00 0.00 0.00 2.32
263 264 7.898636 ACAACCCCTAAAATAATCTGATCCAAA 59.101 33.333 0.00 0.00 0.00 3.28
264 265 7.418378 ACAACCCCTAAAATAATCTGATCCAA 58.582 34.615 0.00 0.00 0.00 3.53
265 266 6.980577 ACAACCCCTAAAATAATCTGATCCA 58.019 36.000 0.00 0.00 0.00 3.41
266 267 6.204882 CGACAACCCCTAAAATAATCTGATCC 59.795 42.308 0.00 0.00 0.00 3.36
267 268 6.990349 TCGACAACCCCTAAAATAATCTGATC 59.010 38.462 0.00 0.00 0.00 2.92
268 269 6.766467 GTCGACAACCCCTAAAATAATCTGAT 59.234 38.462 11.55 0.00 0.00 2.90
269 270 6.110707 GTCGACAACCCCTAAAATAATCTGA 58.889 40.000 11.55 0.00 0.00 3.27
270 271 5.878116 TGTCGACAACCCCTAAAATAATCTG 59.122 40.000 17.62 0.00 0.00 2.90
271 272 6.057321 TGTCGACAACCCCTAAAATAATCT 57.943 37.500 17.62 0.00 0.00 2.40
272 273 6.937436 ATGTCGACAACCCCTAAAATAATC 57.063 37.500 24.13 0.00 0.00 1.75
273 274 7.340256 TGTATGTCGACAACCCCTAAAATAAT 58.660 34.615 24.13 2.88 0.00 1.28
274 275 6.709281 TGTATGTCGACAACCCCTAAAATAA 58.291 36.000 24.13 0.00 0.00 1.40
275 276 6.297080 TGTATGTCGACAACCCCTAAAATA 57.703 37.500 24.13 3.06 0.00 1.40
276 277 5.168647 TGTATGTCGACAACCCCTAAAAT 57.831 39.130 24.13 4.15 0.00 1.82
277 278 4.620589 TGTATGTCGACAACCCCTAAAA 57.379 40.909 24.13 0.00 0.00 1.52
278 279 4.020039 ACATGTATGTCGACAACCCCTAAA 60.020 41.667 24.13 5.34 35.87 1.85
279 280 3.516300 ACATGTATGTCGACAACCCCTAA 59.484 43.478 24.13 4.69 35.87 2.69
280 281 3.101437 ACATGTATGTCGACAACCCCTA 58.899 45.455 24.13 7.06 35.87 3.53
281 282 1.906574 ACATGTATGTCGACAACCCCT 59.093 47.619 24.13 8.19 35.87 4.79
282 283 2.277084 GACATGTATGTCGACAACCCC 58.723 52.381 24.13 10.89 46.46 4.95
364 365 9.565090 GCCCTTATATATGCTTTCATGATATCA 57.435 33.333 8.10 8.10 34.22 2.15
365 366 9.790344 AGCCCTTATATATGCTTTCATGATATC 57.210 33.333 0.00 0.00 34.22 1.63
366 367 9.790344 GAGCCCTTATATATGCTTTCATGATAT 57.210 33.333 0.00 0.00 33.41 1.63
367 368 7.928167 CGAGCCCTTATATATGCTTTCATGATA 59.072 37.037 0.00 0.00 33.41 2.15
368 369 6.765036 CGAGCCCTTATATATGCTTTCATGAT 59.235 38.462 0.00 0.00 33.41 2.45
369 370 6.108687 CGAGCCCTTATATATGCTTTCATGA 58.891 40.000 0.00 0.00 33.41 3.07
370 371 5.877012 ACGAGCCCTTATATATGCTTTCATG 59.123 40.000 0.00 0.00 33.41 3.07
371 372 6.054860 ACGAGCCCTTATATATGCTTTCAT 57.945 37.500 0.00 0.00 33.41 2.57
372 373 5.483685 ACGAGCCCTTATATATGCTTTCA 57.516 39.130 0.00 0.00 33.41 2.69
373 374 5.520649 GCTACGAGCCCTTATATATGCTTTC 59.479 44.000 0.00 0.00 34.48 2.62
374 375 5.046591 TGCTACGAGCCCTTATATATGCTTT 60.047 40.000 0.00 0.00 41.51 3.51
375 376 4.466370 TGCTACGAGCCCTTATATATGCTT 59.534 41.667 0.00 0.00 41.51 3.91
376 377 4.023980 TGCTACGAGCCCTTATATATGCT 58.976 43.478 0.00 0.00 41.51 3.79
377 378 4.113354 GTGCTACGAGCCCTTATATATGC 58.887 47.826 0.00 0.00 41.51 3.14
378 379 4.402793 AGGTGCTACGAGCCCTTATATATG 59.597 45.833 0.00 0.00 41.51 1.78
379 380 4.611367 AGGTGCTACGAGCCCTTATATAT 58.389 43.478 0.00 0.00 41.51 0.86
380 381 4.043608 AGGTGCTACGAGCCCTTATATA 57.956 45.455 0.00 0.00 41.51 0.86
381 382 2.890814 AGGTGCTACGAGCCCTTATAT 58.109 47.619 0.00 0.00 41.51 0.86
382 383 2.376695 AGGTGCTACGAGCCCTTATA 57.623 50.000 0.00 0.00 41.51 0.98
383 384 2.376695 TAGGTGCTACGAGCCCTTAT 57.623 50.000 16.01 3.18 41.51 1.73
384 385 2.029623 CTTAGGTGCTACGAGCCCTTA 58.970 52.381 16.01 10.13 41.51 2.69
385 386 0.824759 CTTAGGTGCTACGAGCCCTT 59.175 55.000 16.01 2.32 41.51 3.95
386 387 1.677637 GCTTAGGTGCTACGAGCCCT 61.678 60.000 15.49 15.49 41.51 5.19
387 388 1.227292 GCTTAGGTGCTACGAGCCC 60.227 63.158 0.00 0.00 41.51 5.19
388 389 1.589196 CGCTTAGGTGCTACGAGCC 60.589 63.158 0.00 0.00 41.51 4.70
389 390 2.231618 GCGCTTAGGTGCTACGAGC 61.232 63.158 0.00 0.00 44.66 5.03
390 391 3.999051 GCGCTTAGGTGCTACGAG 58.001 61.111 0.00 0.00 44.66 4.18
397 398 1.715585 CCGAACATGCGCTTAGGTG 59.284 57.895 9.73 2.33 0.00 4.00
398 399 2.106683 GCCGAACATGCGCTTAGGT 61.107 57.895 9.73 0.00 0.00 3.08
399 400 2.709475 GCCGAACATGCGCTTAGG 59.291 61.111 9.73 5.76 0.00 2.69
400 401 2.709475 GGCCGAACATGCGCTTAG 59.291 61.111 9.73 0.08 0.00 2.18
401 402 3.192230 CGGCCGAACATGCGCTTA 61.192 61.111 24.07 0.00 0.00 3.09
406 407 3.567797 GAGAGCGGCCGAACATGC 61.568 66.667 33.48 10.17 0.00 4.06
407 408 2.892425 GGAGAGCGGCCGAACATG 60.892 66.667 33.48 0.00 0.00 3.21
440 441 2.435938 TGCTAAAAGGGCGCTCCG 60.436 61.111 2.00 0.00 41.52 4.63
441 442 2.765356 GCTGCTAAAAGGGCGCTCC 61.765 63.158 2.00 4.98 0.00 4.70
442 443 1.710103 GAGCTGCTAAAAGGGCGCTC 61.710 60.000 7.64 1.48 43.03 5.03
443 444 1.746991 GAGCTGCTAAAAGGGCGCT 60.747 57.895 7.64 0.00 40.19 5.92
444 445 1.746991 AGAGCTGCTAAAAGGGCGC 60.747 57.895 0.15 0.00 0.00 6.53
445 446 2.093216 CAGAGCTGCTAAAAGGGCG 58.907 57.895 0.15 0.00 0.00 6.13
465 466 3.747579 CCATGAAGCAGGGGGCCT 61.748 66.667 0.84 0.00 46.50 5.19
466 467 4.066139 ACCATGAAGCAGGGGGCC 62.066 66.667 0.00 0.00 46.50 5.80
522 523 0.370273 GGTCTTTCTGCGTACATGCG 59.630 55.000 0.00 0.00 37.81 4.73
529 530 0.468226 TCACCAAGGTCTTTCTGCGT 59.532 50.000 0.00 0.00 0.00 5.24
537 538 5.104067 GGAAAATACCCTATCACCAAGGTCT 60.104 44.000 0.00 0.00 33.70 3.85
538 539 5.131067 GGAAAATACCCTATCACCAAGGTC 58.869 45.833 0.00 0.00 33.70 3.85
540 541 5.124036 TGGAAAATACCCTATCACCAAGG 57.876 43.478 0.00 0.00 0.00 3.61
541 542 6.129179 ACATGGAAAATACCCTATCACCAAG 58.871 40.000 0.00 0.00 0.00 3.61
542 543 6.086011 ACATGGAAAATACCCTATCACCAA 57.914 37.500 0.00 0.00 0.00 3.67
543 544 5.192722 TGACATGGAAAATACCCTATCACCA 59.807 40.000 0.00 0.00 0.00 4.17
544 545 5.690865 TGACATGGAAAATACCCTATCACC 58.309 41.667 0.00 0.00 0.00 4.02
545 546 7.122055 TGTTTGACATGGAAAATACCCTATCAC 59.878 37.037 0.00 0.00 0.00 3.06
546 547 7.178573 TGTTTGACATGGAAAATACCCTATCA 58.821 34.615 0.00 0.00 0.00 2.15
560 727 2.209273 TGTGACGTCTGTTTGACATGG 58.791 47.619 17.92 0.00 45.60 3.66
571 738 0.885150 TCGACTGAGCTGTGACGTCT 60.885 55.000 17.92 0.00 0.00 4.18
580 747 1.025812 CGGTAGGATTCGACTGAGCT 58.974 55.000 0.00 0.00 0.00 4.09
606 773 3.662247 ATAACTGCCTACCGTCATAGC 57.338 47.619 0.00 0.00 0.00 2.97
612 779 2.466547 AGGGTATAACTGCCTACCGT 57.533 50.000 0.00 0.00 38.64 4.83
635 802 0.250038 CCATCGCCGAGGTTGATGAT 60.250 55.000 20.38 3.73 41.54 2.45
636 803 1.143838 CCATCGCCGAGGTTGATGA 59.856 57.895 20.38 1.91 41.54 2.92
653 820 2.826674 TGGGATCTGACCATTTTCCC 57.173 50.000 5.05 5.05 45.28 3.97
688 857 5.515797 AAGCTTAAGCCGAATTTAATCCC 57.484 39.130 23.71 0.00 43.38 3.85
708 877 2.034926 GCGTTTTGACCTTTTTGCGAAG 60.035 45.455 0.00 0.00 0.00 3.79
752 921 4.596585 CGGTGGGGGTGTGCCTTT 62.597 66.667 0.00 0.00 34.45 3.11
836 1005 2.961062 GGGAATGGCAAAGACAGCATAT 59.039 45.455 0.00 0.00 0.00 1.78
850 1019 5.105917 ACGTATTAAAAAGTGCTGGGAATGG 60.106 40.000 0.00 0.00 0.00 3.16
871 1040 0.179127 CTGATCGAGGTGATGCACGT 60.179 55.000 0.00 0.00 37.47 4.49
874 1043 1.144716 GCCTGATCGAGGTGATGCA 59.855 57.895 11.37 0.00 44.97 3.96
939 1108 4.781087 GCCTAGGAGAGTAGAGGAGATAGA 59.219 50.000 14.75 0.00 0.00 1.98
982 1151 4.475135 GCTTGCCCTCCCTCGACC 62.475 72.222 0.00 0.00 0.00 4.79
984 1153 3.393970 CTGCTTGCCCTCCCTCGA 61.394 66.667 0.00 0.00 0.00 4.04
1017 1186 1.299648 GTGGAGTGTAGCCATGGCA 59.700 57.895 37.18 20.88 44.88 4.92
1029 1198 1.296715 GCCGAGGAACATGTGGAGT 59.703 57.895 0.00 0.00 0.00 3.85
1053 1222 2.846206 AGGAGGAATAGTGTGCATGGAA 59.154 45.455 0.00 0.00 0.00 3.53
1103 1296 2.277591 GCAAATGTCTGGCCTGGCA 61.278 57.895 19.96 19.96 0.00 4.92
1149 1342 2.844451 GCCAAGCGTGAACTTGCCA 61.844 57.895 0.00 0.00 44.66 4.92
1159 1352 1.968540 GCTGGAAGAAGCCAAGCGT 60.969 57.895 0.00 0.00 37.52 5.07
1241 1437 3.817647 GGGAGTGATAACATGGATCTTGC 59.182 47.826 10.26 5.28 0.00 4.01
1367 1563 0.323629 GGACCAGACAACGGATTGGA 59.676 55.000 0.00 0.00 40.42 3.53
1959 2203 1.695114 CGTATGGGGTGCAGGGATCA 61.695 60.000 0.00 0.00 0.00 2.92
2090 2334 0.846693 AGTGTTTCTGGAGCACCCTT 59.153 50.000 0.00 0.00 33.96 3.95
2425 2699 2.245096 GCTTGCAGCAATAACAACTCG 58.755 47.619 8.67 0.00 41.89 4.18
2470 2744 4.418973 AGATCACAAGTAGCAGCATGAT 57.581 40.909 0.00 0.00 39.69 2.45
2484 2758 7.388776 CAGTTGAATCTGTTCCTTAAGATCACA 59.611 37.037 3.36 2.86 31.88 3.58
2528 2802 0.035439 ACTACCTTGATTGGTGGCCG 60.035 55.000 0.00 0.00 41.53 6.13
2634 2911 8.383947 AGCTCACTTAAAACTCCCTTAAATACT 58.616 33.333 0.00 0.00 0.00 2.12
2658 2935 3.577649 TTCACTGCTACACTAGTCAGC 57.422 47.619 16.00 16.00 35.07 4.26
2818 3098 4.479619 GAATCAAGAGAACCATTGCACAC 58.520 43.478 0.00 0.00 0.00 3.82
2931 3223 2.787249 CATTCGCGGCAACTCTGG 59.213 61.111 6.13 0.00 0.00 3.86
2955 3247 3.548745 TCAGGCTTGATATCACAGTGG 57.451 47.619 4.48 0.00 0.00 4.00
2973 3265 8.322906 ACGATTCATTGAGAAGTACATTTTCA 57.677 30.769 0.00 0.00 40.15 2.69
3129 3421 6.090129 GCCAAAGCTGTAAACATCGATTTTA 58.910 36.000 0.00 2.16 35.50 1.52
3192 3484 2.212652 CTGCTAGTGTGCACAACAGAA 58.787 47.619 23.59 14.84 40.26 3.02
3521 3822 4.946784 ACTGAAGCAAATAAAGGTAGCG 57.053 40.909 0.00 0.00 0.00 4.26
3542 3843 8.798402 ACGTCCAAATGAGAACCATAAAATTTA 58.202 29.630 0.00 0.00 34.45 1.40
3559 3860 5.354234 CCTTTGAGCTATTACACGTCCAAAT 59.646 40.000 0.00 0.00 0.00 2.32
3607 3924 8.677300 TCAAATGAACTATAAGATGCAGGAAAC 58.323 33.333 0.00 0.00 0.00 2.78
3648 3965 6.016276 ACGAGAACCATAAAATTTGCTGAAGT 60.016 34.615 0.00 0.00 0.00 3.01
3687 4004 0.331616 ACCTCCCATTGTACAAGGCC 59.668 55.000 14.66 0.00 0.00 5.19
3688 4005 1.463674 CACCTCCCATTGTACAAGGC 58.536 55.000 14.66 0.00 0.00 4.35
3689 4006 1.004745 AGCACCTCCCATTGTACAAGG 59.995 52.381 14.65 13.92 0.00 3.61
3690 4007 2.496899 AGCACCTCCCATTGTACAAG 57.503 50.000 14.65 6.30 0.00 3.16
3691 4008 2.969821 AAGCACCTCCCATTGTACAA 57.030 45.000 11.41 11.41 0.00 2.41
3692 4009 3.178046 TCTAAGCACCTCCCATTGTACA 58.822 45.455 0.00 0.00 0.00 2.90
3693 4010 3.451178 TCTCTAAGCACCTCCCATTGTAC 59.549 47.826 0.00 0.00 0.00 2.90
3694 4011 3.706594 CTCTCTAAGCACCTCCCATTGTA 59.293 47.826 0.00 0.00 0.00 2.41
3695 4012 2.503356 CTCTCTAAGCACCTCCCATTGT 59.497 50.000 0.00 0.00 0.00 2.71
3696 4013 2.768527 TCTCTCTAAGCACCTCCCATTG 59.231 50.000 0.00 0.00 0.00 2.82
3697 4014 3.121929 TCTCTCTAAGCACCTCCCATT 57.878 47.619 0.00 0.00 0.00 3.16
3698 4015 2.856760 TCTCTCTAAGCACCTCCCAT 57.143 50.000 0.00 0.00 0.00 4.00
3699 4016 2.392662 CATCTCTCTAAGCACCTCCCA 58.607 52.381 0.00 0.00 0.00 4.37
3700 4017 1.069978 GCATCTCTCTAAGCACCTCCC 59.930 57.143 0.00 0.00 0.00 4.30
3701 4018 2.038659 AGCATCTCTCTAAGCACCTCC 58.961 52.381 0.00 0.00 0.00 4.30
3702 4019 3.817709 AAGCATCTCTCTAAGCACCTC 57.182 47.619 0.00 0.00 0.00 3.85
3703 4020 4.541705 TCTAAGCATCTCTCTAAGCACCT 58.458 43.478 0.00 0.00 0.00 4.00
3704 4021 4.927978 TCTAAGCATCTCTCTAAGCACC 57.072 45.455 0.00 0.00 0.00 5.01
3705 4022 7.602517 TTTTTCTAAGCATCTCTCTAAGCAC 57.397 36.000 0.00 0.00 0.00 4.40
3706 4023 9.890629 TTATTTTTCTAAGCATCTCTCTAAGCA 57.109 29.630 0.00 0.00 0.00 3.91
3710 4027 9.314321 CGGTTTATTTTTCTAAGCATCTCTCTA 57.686 33.333 0.00 0.00 0.00 2.43
3711 4028 7.281100 CCGGTTTATTTTTCTAAGCATCTCTCT 59.719 37.037 0.00 0.00 0.00 3.10
3712 4029 7.410485 CCGGTTTATTTTTCTAAGCATCTCTC 58.590 38.462 0.00 0.00 0.00 3.20
3713 4030 6.318900 CCCGGTTTATTTTTCTAAGCATCTCT 59.681 38.462 0.00 0.00 0.00 3.10
3714 4031 6.095021 ACCCGGTTTATTTTTCTAAGCATCTC 59.905 38.462 0.00 0.00 0.00 2.75
3715 4032 5.949952 ACCCGGTTTATTTTTCTAAGCATCT 59.050 36.000 0.00 0.00 0.00 2.90
3716 4033 6.203808 ACCCGGTTTATTTTTCTAAGCATC 57.796 37.500 0.00 0.00 0.00 3.91
3717 4034 6.599356 AACCCGGTTTATTTTTCTAAGCAT 57.401 33.333 0.00 0.00 0.00 3.79
3718 4035 6.408107 AAACCCGGTTTATTTTTCTAAGCA 57.592 33.333 14.16 0.00 33.70 3.91
3719 4036 7.718272 AAAAACCCGGTTTATTTTTCTAAGC 57.282 32.000 16.03 0.00 34.43 3.09
3724 4041 7.517734 GCTTCAGAAAAACCCGGTTTATTTTTC 60.518 37.037 22.79 22.79 45.95 2.29
3725 4042 6.259167 GCTTCAGAAAAACCCGGTTTATTTTT 59.741 34.615 16.03 6.68 38.03 1.94
3726 4043 5.756347 GCTTCAGAAAAACCCGGTTTATTTT 59.244 36.000 16.03 7.04 34.43 1.82
3727 4044 5.163395 TGCTTCAGAAAAACCCGGTTTATTT 60.163 36.000 16.03 7.76 34.43 1.40
3728 4045 4.342665 TGCTTCAGAAAAACCCGGTTTATT 59.657 37.500 16.03 11.90 34.43 1.40
3729 4046 3.892588 TGCTTCAGAAAAACCCGGTTTAT 59.107 39.130 16.03 3.02 34.43 1.40
3730 4047 3.067040 GTGCTTCAGAAAAACCCGGTTTA 59.933 43.478 16.03 0.00 34.43 2.01
3731 4048 2.104170 TGCTTCAGAAAAACCCGGTTT 58.896 42.857 9.92 9.92 37.34 3.27
3732 4049 1.407618 GTGCTTCAGAAAAACCCGGTT 59.592 47.619 0.00 0.00 0.00 4.44
3733 4050 1.029681 GTGCTTCAGAAAAACCCGGT 58.970 50.000 0.00 0.00 0.00 5.28
3734 4051 0.313987 GGTGCTTCAGAAAAACCCGG 59.686 55.000 0.00 0.00 0.00 5.73
3735 4052 0.040425 CGGTGCTTCAGAAAAACCCG 60.040 55.000 7.91 3.09 0.00 5.28
3736 4053 0.313987 CCGGTGCTTCAGAAAAACCC 59.686 55.000 0.00 0.00 0.00 4.11
3737 4054 1.029681 ACCGGTGCTTCAGAAAAACC 58.970 50.000 6.12 4.42 0.00 3.27
3738 4055 2.119671 CACCGGTGCTTCAGAAAAAC 57.880 50.000 24.02 0.00 0.00 2.43
3750 4067 2.550978 CTGTAGAAATAGGCACCGGTG 58.449 52.381 30.66 30.66 0.00 4.94
3751 4068 1.485066 CCTGTAGAAATAGGCACCGGT 59.515 52.381 0.00 0.00 0.00 5.28
3752 4069 1.760613 TCCTGTAGAAATAGGCACCGG 59.239 52.381 0.00 0.00 34.08 5.28
3753 4070 2.693591 TCTCCTGTAGAAATAGGCACCG 59.306 50.000 0.00 0.00 34.08 4.94
3754 4071 3.961408 TCTCTCCTGTAGAAATAGGCACC 59.039 47.826 0.00 0.00 34.08 5.01
3755 4072 4.498345 CGTCTCTCCTGTAGAAATAGGCAC 60.498 50.000 0.00 0.00 34.08 5.01
3756 4073 3.632604 CGTCTCTCCTGTAGAAATAGGCA 59.367 47.826 0.00 0.00 34.08 4.75
3757 4074 3.551250 GCGTCTCTCCTGTAGAAATAGGC 60.551 52.174 0.00 0.00 34.08 3.93
3758 4075 3.886505 AGCGTCTCTCCTGTAGAAATAGG 59.113 47.826 0.00 0.00 35.36 2.57
3759 4076 5.508200 AAGCGTCTCTCCTGTAGAAATAG 57.492 43.478 0.00 0.00 32.46 1.73
3760 4077 6.120905 ACTAAGCGTCTCTCCTGTAGAAATA 58.879 40.000 0.00 0.00 32.46 1.40
3761 4078 4.951094 ACTAAGCGTCTCTCCTGTAGAAAT 59.049 41.667 0.00 0.00 32.46 2.17
3762 4079 4.333690 ACTAAGCGTCTCTCCTGTAGAAA 58.666 43.478 0.00 0.00 32.46 2.52
3763 4080 3.952931 ACTAAGCGTCTCTCCTGTAGAA 58.047 45.455 0.00 0.00 32.46 2.10
3764 4081 3.630892 ACTAAGCGTCTCTCCTGTAGA 57.369 47.619 0.00 0.00 0.00 2.59
3765 4082 5.812652 CTTAACTAAGCGTCTCTCCTGTAG 58.187 45.833 0.00 0.00 0.00 2.74
3766 4083 5.814764 CTTAACTAAGCGTCTCTCCTGTA 57.185 43.478 0.00 0.00 0.00 2.74
3767 4084 4.705337 CTTAACTAAGCGTCTCTCCTGT 57.295 45.455 0.00 0.00 0.00 4.00
3779 4096 7.024340 TGTACAGGATAGACGCTTAACTAAG 57.976 40.000 0.00 0.00 36.40 2.18
3780 4097 7.395190 TTGTACAGGATAGACGCTTAACTAA 57.605 36.000 0.00 0.00 0.00 2.24
3781 4098 7.395190 TTTGTACAGGATAGACGCTTAACTA 57.605 36.000 0.00 0.00 0.00 2.24
3782 4099 5.909621 TTGTACAGGATAGACGCTTAACT 57.090 39.130 0.00 0.00 0.00 2.24
3783 4100 8.638685 TTATTTGTACAGGATAGACGCTTAAC 57.361 34.615 0.00 0.00 0.00 2.01
3784 4101 7.437267 GCTTATTTGTACAGGATAGACGCTTAA 59.563 37.037 0.00 0.00 0.00 1.85
3785 4102 6.921857 GCTTATTTGTACAGGATAGACGCTTA 59.078 38.462 0.00 0.00 0.00 3.09
3786 4103 5.753921 GCTTATTTGTACAGGATAGACGCTT 59.246 40.000 0.00 0.00 0.00 4.68
3787 4104 5.163447 TGCTTATTTGTACAGGATAGACGCT 60.163 40.000 0.00 0.00 0.00 5.07
3788 4105 5.047847 TGCTTATTTGTACAGGATAGACGC 58.952 41.667 0.00 4.64 0.00 5.19
3789 4106 5.462398 GGTGCTTATTTGTACAGGATAGACG 59.538 44.000 0.00 0.00 0.00 4.18
3790 4107 5.462398 CGGTGCTTATTTGTACAGGATAGAC 59.538 44.000 0.00 0.00 0.00 2.59
3791 4108 5.452776 CCGGTGCTTATTTGTACAGGATAGA 60.453 44.000 0.00 0.00 39.37 1.98
3792 4109 4.750098 CCGGTGCTTATTTGTACAGGATAG 59.250 45.833 0.00 0.00 39.37 2.08
3793 4110 4.162698 ACCGGTGCTTATTTGTACAGGATA 59.837 41.667 6.12 0.00 39.37 2.59
3794 4111 3.054655 ACCGGTGCTTATTTGTACAGGAT 60.055 43.478 6.12 0.00 39.37 3.24
3795 4112 2.303600 ACCGGTGCTTATTTGTACAGGA 59.696 45.455 6.12 0.00 39.37 3.86
3796 4113 2.418628 CACCGGTGCTTATTTGTACAGG 59.581 50.000 24.02 0.00 41.71 4.00
3797 4114 3.740044 CACCGGTGCTTATTTGTACAG 57.260 47.619 24.02 0.00 0.00 2.74
3810 4127 1.068541 GGCTTTTCTTAAGCACCGGTG 60.069 52.381 30.66 30.66 44.71 4.94
3811 4128 1.202891 AGGCTTTTCTTAAGCACCGGT 60.203 47.619 0.00 0.00 44.71 5.28
3812 4129 1.200020 CAGGCTTTTCTTAAGCACCGG 59.800 52.381 0.00 0.00 44.71 5.28
3813 4130 1.200020 CCAGGCTTTTCTTAAGCACCG 59.800 52.381 11.18 0.00 44.71 4.94
3814 4131 2.239400 ACCAGGCTTTTCTTAAGCACC 58.761 47.619 11.18 0.00 44.71 5.01
3815 4132 4.322080 AAACCAGGCTTTTCTTAAGCAC 57.678 40.909 11.18 1.86 44.71 4.40
3816 4133 6.664428 AATAAACCAGGCTTTTCTTAAGCA 57.336 33.333 11.18 0.00 44.71 3.91
3817 4134 7.378966 AGAAATAAACCAGGCTTTTCTTAAGC 58.621 34.615 4.24 0.98 42.30 3.09
3818 4135 8.797438 AGAGAAATAAACCAGGCTTTTCTTAAG 58.203 33.333 10.11 0.00 36.91 1.85
3819 4136 8.706322 AGAGAAATAAACCAGGCTTTTCTTAA 57.294 30.769 10.11 0.00 36.91 1.85
3820 4137 9.802039 TTAGAGAAATAAACCAGGCTTTTCTTA 57.198 29.630 10.11 4.15 36.91 2.10
3821 4138 8.706322 TTAGAGAAATAAACCAGGCTTTTCTT 57.294 30.769 10.11 4.86 36.91 2.52
3822 4139 7.094162 GCTTAGAGAAATAAACCAGGCTTTTCT 60.094 37.037 8.86 8.86 38.86 2.52
3823 4140 7.030165 GCTTAGAGAAATAAACCAGGCTTTTC 58.970 38.462 0.00 0.00 0.00 2.29
3824 4141 6.493458 TGCTTAGAGAAATAAACCAGGCTTTT 59.507 34.615 0.00 0.00 0.00 2.27
3825 4142 6.010219 TGCTTAGAGAAATAAACCAGGCTTT 58.990 36.000 0.00 0.00 0.00 3.51
3826 4143 5.416013 GTGCTTAGAGAAATAAACCAGGCTT 59.584 40.000 0.00 0.00 0.00 4.35
3827 4144 4.944317 GTGCTTAGAGAAATAAACCAGGCT 59.056 41.667 0.00 0.00 0.00 4.58
3828 4145 4.096532 GGTGCTTAGAGAAATAAACCAGGC 59.903 45.833 0.00 0.00 0.00 4.85
3829 4146 5.501156 AGGTGCTTAGAGAAATAAACCAGG 58.499 41.667 0.00 0.00 0.00 4.45
3830 4147 5.586643 GGAGGTGCTTAGAGAAATAAACCAG 59.413 44.000 0.00 0.00 0.00 4.00
3831 4148 5.497474 GGAGGTGCTTAGAGAAATAAACCA 58.503 41.667 0.00 0.00 0.00 3.67
3832 4149 4.882427 GGGAGGTGCTTAGAGAAATAAACC 59.118 45.833 0.00 0.00 0.00 3.27
3833 4150 4.882427 GGGGAGGTGCTTAGAGAAATAAAC 59.118 45.833 0.00 0.00 0.00 2.01
3834 4151 4.788617 AGGGGAGGTGCTTAGAGAAATAAA 59.211 41.667 0.00 0.00 0.00 1.40
3835 4152 4.371681 AGGGGAGGTGCTTAGAGAAATAA 58.628 43.478 0.00 0.00 0.00 1.40
3836 4153 4.008916 AGGGGAGGTGCTTAGAGAAATA 57.991 45.455 0.00 0.00 0.00 1.40
3837 4154 2.852130 AGGGGAGGTGCTTAGAGAAAT 58.148 47.619 0.00 0.00 0.00 2.17
3838 4155 2.344093 AGGGGAGGTGCTTAGAGAAA 57.656 50.000 0.00 0.00 0.00 2.52
3839 4156 3.375699 CTTAGGGGAGGTGCTTAGAGAA 58.624 50.000 0.00 0.00 0.00 2.87
3840 4157 2.955461 GCTTAGGGGAGGTGCTTAGAGA 60.955 54.545 0.00 0.00 0.00 3.10
3841 4158 1.414550 GCTTAGGGGAGGTGCTTAGAG 59.585 57.143 0.00 0.00 0.00 2.43
3842 4159 1.273609 TGCTTAGGGGAGGTGCTTAGA 60.274 52.381 0.00 0.00 0.00 2.10
3843 4160 1.134371 GTGCTTAGGGGAGGTGCTTAG 60.134 57.143 0.00 0.00 0.00 2.18
3844 4161 0.909623 GTGCTTAGGGGAGGTGCTTA 59.090 55.000 0.00 0.00 0.00 3.09
3845 4162 1.685820 GTGCTTAGGGGAGGTGCTT 59.314 57.895 0.00 0.00 0.00 3.91
3846 4163 2.301738 GGTGCTTAGGGGAGGTGCT 61.302 63.158 0.00 0.00 0.00 4.40
3847 4164 1.853250 AAGGTGCTTAGGGGAGGTGC 61.853 60.000 0.00 0.00 0.00 5.01
3848 4165 0.253327 GAAGGTGCTTAGGGGAGGTG 59.747 60.000 0.00 0.00 0.00 4.00
3849 4166 0.914902 GGAAGGTGCTTAGGGGAGGT 60.915 60.000 0.00 0.00 0.00 3.85
3850 4167 0.914417 TGGAAGGTGCTTAGGGGAGG 60.914 60.000 0.00 0.00 0.00 4.30
3851 4168 1.216990 ATGGAAGGTGCTTAGGGGAG 58.783 55.000 0.00 0.00 0.00 4.30
3852 4169 1.284785 CAATGGAAGGTGCTTAGGGGA 59.715 52.381 0.00 0.00 0.00 4.81
3853 4170 1.005924 ACAATGGAAGGTGCTTAGGGG 59.994 52.381 0.00 0.00 0.00 4.79
3854 4171 2.514458 ACAATGGAAGGTGCTTAGGG 57.486 50.000 0.00 0.00 0.00 3.53
3855 4172 3.950397 TGTACAATGGAAGGTGCTTAGG 58.050 45.455 0.00 0.00 0.00 2.69
3856 4173 4.396166 CCTTGTACAATGGAAGGTGCTTAG 59.604 45.833 9.13 0.00 32.94 2.18
3857 4174 4.331968 CCTTGTACAATGGAAGGTGCTTA 58.668 43.478 9.13 0.00 32.94 3.09
3858 4175 3.157087 CCTTGTACAATGGAAGGTGCTT 58.843 45.455 9.13 0.00 32.94 3.91
3859 4176 2.795329 CCTTGTACAATGGAAGGTGCT 58.205 47.619 9.13 0.00 32.94 4.40
3860 4177 1.202348 GCCTTGTACAATGGAAGGTGC 59.798 52.381 21.28 7.67 38.85 5.01
3861 4178 1.818674 GGCCTTGTACAATGGAAGGTG 59.181 52.381 21.28 4.72 38.85 4.00
3862 4179 1.710809 AGGCCTTGTACAATGGAAGGT 59.289 47.619 21.28 0.00 38.85 3.50
3863 4180 2.514458 AGGCCTTGTACAATGGAAGG 57.486 50.000 21.28 14.79 39.51 3.46
3864 4181 5.239525 GCTATTAGGCCTTGTACAATGGAAG 59.760 44.000 12.58 0.00 0.00 3.46
3865 4182 5.104109 AGCTATTAGGCCTTGTACAATGGAA 60.104 40.000 12.58 11.30 0.00 3.53
3866 4183 4.412199 AGCTATTAGGCCTTGTACAATGGA 59.588 41.667 12.58 6.86 0.00 3.41
3867 4184 4.718961 AGCTATTAGGCCTTGTACAATGG 58.281 43.478 12.58 13.26 0.00 3.16
3868 4185 5.368145 TGAGCTATTAGGCCTTGTACAATG 58.632 41.667 12.58 7.68 0.00 2.82
3869 4186 5.630415 TGAGCTATTAGGCCTTGTACAAT 57.370 39.130 12.58 6.77 0.00 2.71
3870 4187 5.428253 CTTGAGCTATTAGGCCTTGTACAA 58.572 41.667 12.58 8.28 0.00 2.41
3871 4188 4.141711 CCTTGAGCTATTAGGCCTTGTACA 60.142 45.833 12.58 0.00 0.00 2.90
3872 4189 4.101119 TCCTTGAGCTATTAGGCCTTGTAC 59.899 45.833 12.58 0.00 0.00 2.90
3873 4190 4.295201 TCCTTGAGCTATTAGGCCTTGTA 58.705 43.478 12.58 3.27 0.00 2.41
3874 4191 3.115390 TCCTTGAGCTATTAGGCCTTGT 58.885 45.455 12.58 1.94 0.00 3.16
3875 4192 3.845781 TCCTTGAGCTATTAGGCCTTG 57.154 47.619 12.58 0.00 0.00 3.61
3876 4193 6.710499 ATAATCCTTGAGCTATTAGGCCTT 57.290 37.500 12.58 0.00 0.00 4.35
3877 4194 7.814693 TTATAATCCTTGAGCTATTAGGCCT 57.185 36.000 11.78 11.78 0.00 5.19
3878 4195 8.863872 TTTTATAATCCTTGAGCTATTAGGCC 57.136 34.615 0.00 0.00 0.00 5.19
3959 4276 5.395682 AAGTGAGTTAGTATTGCCGTACA 57.604 39.130 0.00 0.00 0.00 2.90
4159 4765 6.483974 CCAGTCGACTGTAATATAGACACTCT 59.516 42.308 36.37 0.11 42.27 3.24
4222 4828 1.144969 CATACGCCTGTCACGTTGTT 58.855 50.000 0.00 0.00 41.93 2.83
4234 4840 8.337532 TGTCGTACATACATATATACATACGCC 58.662 37.037 0.00 0.00 35.37 5.68
4347 4955 9.146984 GTTTAGTGCATCTATTACACTGTTACA 57.853 33.333 5.19 0.00 44.12 2.41
4362 4970 2.094762 ACGGTCAGGTTTAGTGCATC 57.905 50.000 0.00 0.00 0.00 3.91
4445 5053 2.483106 CGATCAGATGTGAATGGGATGC 59.517 50.000 0.00 0.00 35.88 3.91
4567 5175 8.575649 TGAATTTTTACAGTCCCTAAATCTCC 57.424 34.615 0.00 0.00 0.00 3.71
4922 5530 6.351966 GCCTACTTCTAAGGTTGGATACTTGT 60.352 42.308 0.00 0.00 36.43 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.