Multiple sequence alignment - TraesCS7B01G285400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G285400 chr7B 100.000 3249 0 0 1 3249 519525576 519522328 0.000000e+00 6000.0
1 TraesCS7B01G285400 chr7D 90.925 2270 78 36 408 2621 490882404 490880207 0.000000e+00 2933.0
2 TraesCS7B01G285400 chr7D 90.301 598 46 6 2663 3249 416134728 416135324 0.000000e+00 773.0
3 TraesCS7B01G285400 chr7D 88.314 599 58 4 2663 3249 245575494 245576092 0.000000e+00 708.0
4 TraesCS7B01G285400 chr7A 90.675 2252 101 35 446 2663 556921981 556919805 0.000000e+00 2894.0
5 TraesCS7B01G285400 chr6B 98.786 412 4 1 1 412 365633558 365633148 0.000000e+00 732.0
6 TraesCS7B01G285400 chr6B 86.622 598 68 6 2663 3249 376288077 376288673 0.000000e+00 651.0
7 TraesCS7B01G285400 chr6B 84.489 548 70 7 2715 3249 548909591 548910136 7.980000e-146 527.0
8 TraesCS7B01G285400 chr6B 80.041 491 82 13 1102 1587 38971330 38971809 1.850000e-92 350.0
9 TraesCS7B01G285400 chr2B 98.778 409 4 1 1 408 504754606 504755014 0.000000e+00 726.0
10 TraesCS7B01G285400 chr2B 98.771 407 5 0 1 407 52464219 52463813 0.000000e+00 725.0
11 TraesCS7B01G285400 chr2B 86.500 600 53 17 2663 3249 313495390 313494806 4.570000e-178 634.0
12 TraesCS7B01G285400 chr1B 98.771 407 5 0 1 407 60338865 60338459 0.000000e+00 725.0
13 TraesCS7B01G285400 chr1B 98.771 407 5 0 1 407 60346610 60346204 0.000000e+00 725.0
14 TraesCS7B01G285400 chr4A 98.768 406 5 0 1 406 621141522 621141927 0.000000e+00 723.0
15 TraesCS7B01G285400 chr1A 98.768 406 5 0 1 406 559618496 559618901 0.000000e+00 723.0
16 TraesCS7B01G285400 chr1A 97.608 418 8 1 1 416 490785926 490785509 0.000000e+00 715.0
17 TraesCS7B01G285400 chr3B 98.297 411 7 0 1 411 674132295 674131885 0.000000e+00 721.0
18 TraesCS7B01G285400 chr1D 88.314 599 56 8 2663 3249 1020590 1021186 0.000000e+00 706.0
19 TraesCS7B01G285400 chr1D 88.127 598 60 7 2663 3249 220393056 220393653 0.000000e+00 701.0
20 TraesCS7B01G285400 chr1D 85.620 605 68 9 2663 3249 175853671 175854274 4.610000e-173 617.0
21 TraesCS7B01G285400 chr5D 87.291 598 65 5 2663 3249 458084377 458084974 0.000000e+00 673.0
22 TraesCS7B01G285400 chr5D 82.843 612 77 19 2663 3249 189040051 189040659 1.030000e-144 523.0
23 TraesCS7B01G285400 chr3D 86.545 602 64 7 2665 3249 301726324 301726925 0.000000e+00 647.0
24 TraesCS7B01G285400 chr3D 82.060 602 91 10 2663 3249 260198801 260199400 6.260000e-137 497.0
25 TraesCS7B01G285400 chr2D 86.525 423 49 6 2824 3239 282091946 282092367 2.950000e-125 459.0
26 TraesCS7B01G285400 chr2D 86.525 423 49 5 2824 3239 283253736 283254157 2.950000e-125 459.0
27 TraesCS7B01G285400 chr2D 96.000 50 2 0 1191 1240 27062588 27062637 7.470000e-12 82.4
28 TraesCS7B01G285400 chr6D 79.796 490 85 11 1102 1587 24029268 24029747 8.630000e-91 344.0
29 TraesCS7B01G285400 chr6A 79.796 490 85 11 1102 1587 22555334 22555813 8.630000e-91 344.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G285400 chr7B 519522328 519525576 3248 True 6000 6000 100.000 1 3249 1 chr7B.!!$R1 3248
1 TraesCS7B01G285400 chr7D 490880207 490882404 2197 True 2933 2933 90.925 408 2621 1 chr7D.!!$R1 2213
2 TraesCS7B01G285400 chr7D 416134728 416135324 596 False 773 773 90.301 2663 3249 1 chr7D.!!$F2 586
3 TraesCS7B01G285400 chr7D 245575494 245576092 598 False 708 708 88.314 2663 3249 1 chr7D.!!$F1 586
4 TraesCS7B01G285400 chr7A 556919805 556921981 2176 True 2894 2894 90.675 446 2663 1 chr7A.!!$R1 2217
5 TraesCS7B01G285400 chr6B 376288077 376288673 596 False 651 651 86.622 2663 3249 1 chr6B.!!$F2 586
6 TraesCS7B01G285400 chr6B 548909591 548910136 545 False 527 527 84.489 2715 3249 1 chr6B.!!$F3 534
7 TraesCS7B01G285400 chr2B 313494806 313495390 584 True 634 634 86.500 2663 3249 1 chr2B.!!$R2 586
8 TraesCS7B01G285400 chr1D 1020590 1021186 596 False 706 706 88.314 2663 3249 1 chr1D.!!$F1 586
9 TraesCS7B01G285400 chr1D 220393056 220393653 597 False 701 701 88.127 2663 3249 1 chr1D.!!$F3 586
10 TraesCS7B01G285400 chr1D 175853671 175854274 603 False 617 617 85.620 2663 3249 1 chr1D.!!$F2 586
11 TraesCS7B01G285400 chr5D 458084377 458084974 597 False 673 673 87.291 2663 3249 1 chr5D.!!$F2 586
12 TraesCS7B01G285400 chr5D 189040051 189040659 608 False 523 523 82.843 2663 3249 1 chr5D.!!$F1 586
13 TraesCS7B01G285400 chr3D 301726324 301726925 601 False 647 647 86.545 2665 3249 1 chr3D.!!$F2 584
14 TraesCS7B01G285400 chr3D 260198801 260199400 599 False 497 497 82.060 2663 3249 1 chr3D.!!$F1 586

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
143 144 0.040336 GCGTGAACGTGTCTCTCAGA 60.040 55.0 4.59 0.0 42.22 3.27 F
813 849 0.096628 CTGTAGGACGACGACGAAGG 59.903 60.0 15.32 0.0 42.66 3.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1045 1092 0.034767 CAAGCTCAGGCAATGGAGGA 60.035 55.0 0.0 0.0 41.7 3.71 R
2432 2501 0.034767 CATCCAAGCAAGAGCCAGGA 60.035 55.0 0.0 0.0 44.9 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 5.681639 AGTTAAGTATACCCCAATCACAGC 58.318 41.667 0.00 0.00 0.00 4.40
24 25 3.577805 AAGTATACCCCAATCACAGCC 57.422 47.619 0.00 0.00 0.00 4.85
25 26 2.776665 AGTATACCCCAATCACAGCCT 58.223 47.619 0.00 0.00 0.00 4.58
26 27 2.706190 AGTATACCCCAATCACAGCCTC 59.294 50.000 0.00 0.00 0.00 4.70
27 28 0.846693 ATACCCCAATCACAGCCTCC 59.153 55.000 0.00 0.00 0.00 4.30
28 29 0.253160 TACCCCAATCACAGCCTCCT 60.253 55.000 0.00 0.00 0.00 3.69
29 30 1.077212 CCCCAATCACAGCCTCCTG 60.077 63.158 0.00 0.00 44.80 3.86
38 39 3.733709 CAGCCTCCTGTTCTTTGGT 57.266 52.632 0.00 0.00 34.31 3.67
39 40 1.242076 CAGCCTCCTGTTCTTTGGTG 58.758 55.000 0.00 0.00 34.31 4.17
40 41 0.846693 AGCCTCCTGTTCTTTGGTGT 59.153 50.000 0.00 0.00 0.00 4.16
41 42 0.954452 GCCTCCTGTTCTTTGGTGTG 59.046 55.000 0.00 0.00 0.00 3.82
42 43 1.476833 GCCTCCTGTTCTTTGGTGTGA 60.477 52.381 0.00 0.00 0.00 3.58
43 44 2.815589 GCCTCCTGTTCTTTGGTGTGAT 60.816 50.000 0.00 0.00 0.00 3.06
44 45 3.559171 GCCTCCTGTTCTTTGGTGTGATA 60.559 47.826 0.00 0.00 0.00 2.15
45 46 4.651778 CCTCCTGTTCTTTGGTGTGATAA 58.348 43.478 0.00 0.00 0.00 1.75
46 47 4.455877 CCTCCTGTTCTTTGGTGTGATAAC 59.544 45.833 0.00 0.00 0.00 1.89
47 48 5.042463 TCCTGTTCTTTGGTGTGATAACA 57.958 39.130 0.00 0.00 0.00 2.41
48 49 5.630121 TCCTGTTCTTTGGTGTGATAACAT 58.370 37.500 0.00 0.00 0.00 2.71
49 50 5.705441 TCCTGTTCTTTGGTGTGATAACATC 59.295 40.000 0.00 0.00 0.00 3.06
50 51 5.390885 CCTGTTCTTTGGTGTGATAACATCG 60.391 44.000 0.00 0.00 0.00 3.84
51 52 4.454161 TGTTCTTTGGTGTGATAACATCGG 59.546 41.667 0.00 0.00 0.00 4.18
52 53 4.280436 TCTTTGGTGTGATAACATCGGT 57.720 40.909 0.00 0.00 0.00 4.69
53 54 4.000325 TCTTTGGTGTGATAACATCGGTG 59.000 43.478 0.00 0.00 0.00 4.94
54 55 1.732941 TGGTGTGATAACATCGGTGC 58.267 50.000 0.00 0.00 0.00 5.01
55 56 1.277842 TGGTGTGATAACATCGGTGCT 59.722 47.619 0.00 0.00 0.00 4.40
56 57 2.498078 TGGTGTGATAACATCGGTGCTA 59.502 45.455 0.00 0.00 0.00 3.49
57 58 2.864343 GGTGTGATAACATCGGTGCTAC 59.136 50.000 0.00 0.00 0.00 3.58
58 59 3.517602 GTGTGATAACATCGGTGCTACA 58.482 45.455 0.00 0.00 0.00 2.74
59 60 4.119862 GTGTGATAACATCGGTGCTACAT 58.880 43.478 0.00 0.00 0.00 2.29
60 61 5.286438 GTGTGATAACATCGGTGCTACATA 58.714 41.667 0.00 0.00 0.00 2.29
61 62 5.175126 GTGTGATAACATCGGTGCTACATAC 59.825 44.000 0.00 0.00 0.00 2.39
62 63 4.684703 GTGATAACATCGGTGCTACATACC 59.315 45.833 0.00 0.00 34.81 2.73
63 64 4.587262 TGATAACATCGGTGCTACATACCT 59.413 41.667 0.00 0.00 36.03 3.08
64 65 3.906720 AACATCGGTGCTACATACCTT 57.093 42.857 0.00 0.00 36.03 3.50
65 66 3.906720 ACATCGGTGCTACATACCTTT 57.093 42.857 0.00 0.00 36.03 3.11
66 67 3.793559 ACATCGGTGCTACATACCTTTC 58.206 45.455 0.00 0.00 36.03 2.62
67 68 3.451178 ACATCGGTGCTACATACCTTTCT 59.549 43.478 0.00 0.00 36.03 2.52
68 69 3.520290 TCGGTGCTACATACCTTTCTG 57.480 47.619 0.00 0.00 36.03 3.02
69 70 1.933853 CGGTGCTACATACCTTTCTGC 59.066 52.381 0.00 0.00 36.03 4.26
70 71 2.676750 CGGTGCTACATACCTTTCTGCA 60.677 50.000 0.00 0.00 36.03 4.41
71 72 3.343617 GGTGCTACATACCTTTCTGCAA 58.656 45.455 0.00 0.00 35.30 4.08
72 73 3.756434 GGTGCTACATACCTTTCTGCAAA 59.244 43.478 0.00 0.00 35.30 3.68
73 74 4.399303 GGTGCTACATACCTTTCTGCAAAT 59.601 41.667 0.00 0.00 35.30 2.32
74 75 5.449177 GGTGCTACATACCTTTCTGCAAATC 60.449 44.000 0.00 0.00 35.30 2.17
75 76 4.640201 TGCTACATACCTTTCTGCAAATCC 59.360 41.667 0.00 0.00 0.00 3.01
76 77 4.260784 GCTACATACCTTTCTGCAAATCCG 60.261 45.833 0.00 0.00 0.00 4.18
77 78 3.016736 ACATACCTTTCTGCAAATCCGG 58.983 45.455 0.00 0.00 0.00 5.14
78 79 2.871096 TACCTTTCTGCAAATCCGGT 57.129 45.000 0.00 0.00 0.00 5.28
79 80 2.871096 ACCTTTCTGCAAATCCGGTA 57.129 45.000 0.00 0.00 0.00 4.02
80 81 3.366052 ACCTTTCTGCAAATCCGGTAT 57.634 42.857 0.00 0.00 0.00 2.73
81 82 3.697166 ACCTTTCTGCAAATCCGGTATT 58.303 40.909 0.00 0.00 0.00 1.89
82 83 3.694566 ACCTTTCTGCAAATCCGGTATTC 59.305 43.478 0.00 0.00 0.00 1.75
83 84 3.066760 CCTTTCTGCAAATCCGGTATTCC 59.933 47.826 0.00 0.00 0.00 3.01
84 85 3.358111 TTCTGCAAATCCGGTATTCCA 57.642 42.857 0.00 0.00 0.00 3.53
85 86 3.576078 TCTGCAAATCCGGTATTCCAT 57.424 42.857 0.00 0.00 0.00 3.41
86 87 3.213506 TCTGCAAATCCGGTATTCCATG 58.786 45.455 0.00 0.00 0.00 3.66
87 88 1.680735 TGCAAATCCGGTATTCCATGC 59.319 47.619 0.00 7.88 0.00 4.06
88 89 1.000274 GCAAATCCGGTATTCCATGCC 60.000 52.381 0.00 0.00 0.00 4.40
89 90 1.613437 CAAATCCGGTATTCCATGCCC 59.387 52.381 0.00 0.00 0.00 5.36
90 91 0.250727 AATCCGGTATTCCATGCCCG 60.251 55.000 0.00 0.00 40.12 6.13
91 92 1.125093 ATCCGGTATTCCATGCCCGA 61.125 55.000 0.00 0.00 43.01 5.14
92 93 1.147376 CCGGTATTCCATGCCCGAA 59.853 57.895 0.00 0.00 43.01 4.30
93 94 1.164041 CCGGTATTCCATGCCCGAAC 61.164 60.000 0.00 0.00 43.01 3.95
94 95 1.495584 CGGTATTCCATGCCCGAACG 61.496 60.000 0.00 0.00 43.01 3.95
95 96 0.179067 GGTATTCCATGCCCGAACGA 60.179 55.000 0.00 0.00 0.00 3.85
96 97 1.658994 GTATTCCATGCCCGAACGAA 58.341 50.000 0.00 0.00 0.00 3.85
97 98 2.011222 GTATTCCATGCCCGAACGAAA 58.989 47.619 0.00 0.00 0.00 3.46
98 99 0.808755 ATTCCATGCCCGAACGAAAC 59.191 50.000 0.00 0.00 0.00 2.78
99 100 0.535328 TTCCATGCCCGAACGAAACA 60.535 50.000 0.00 0.00 0.00 2.83
100 101 1.209127 CCATGCCCGAACGAAACAC 59.791 57.895 0.00 0.00 0.00 3.32
101 102 1.511318 CCATGCCCGAACGAAACACA 61.511 55.000 0.00 0.00 0.00 3.72
102 103 0.521291 CATGCCCGAACGAAACACAT 59.479 50.000 0.00 0.00 0.00 3.21
103 104 1.068610 CATGCCCGAACGAAACACATT 60.069 47.619 0.00 0.00 0.00 2.71
104 105 0.309302 TGCCCGAACGAAACACATTG 59.691 50.000 0.00 0.00 0.00 2.82
105 106 0.589223 GCCCGAACGAAACACATTGA 59.411 50.000 0.00 0.00 0.00 2.57
106 107 1.002251 GCCCGAACGAAACACATTGAA 60.002 47.619 0.00 0.00 0.00 2.69
107 108 2.916111 CCCGAACGAAACACATTGAAG 58.084 47.619 0.00 0.00 0.00 3.02
108 109 2.289547 CCCGAACGAAACACATTGAAGT 59.710 45.455 0.00 0.00 0.00 3.01
109 110 3.242936 CCCGAACGAAACACATTGAAGTT 60.243 43.478 0.00 0.00 0.00 2.66
110 111 3.723764 CCGAACGAAACACATTGAAGTTG 59.276 43.478 0.00 0.00 0.00 3.16
111 112 4.495019 CCGAACGAAACACATTGAAGTTGA 60.495 41.667 0.00 0.00 0.00 3.18
112 113 4.433304 CGAACGAAACACATTGAAGTTGAC 59.567 41.667 0.00 0.00 0.00 3.18
113 114 5.560966 AACGAAACACATTGAAGTTGACT 57.439 34.783 0.00 0.00 0.00 3.41
114 115 6.508880 CGAACGAAACACATTGAAGTTGACTA 60.509 38.462 0.00 0.00 0.00 2.59
115 116 6.861065 ACGAAACACATTGAAGTTGACTAT 57.139 33.333 0.00 0.00 0.00 2.12
116 117 6.888430 ACGAAACACATTGAAGTTGACTATC 58.112 36.000 0.00 0.00 0.00 2.08
117 118 6.481976 ACGAAACACATTGAAGTTGACTATCA 59.518 34.615 0.00 0.00 0.00 2.15
118 119 6.792250 CGAAACACATTGAAGTTGACTATCAC 59.208 38.462 0.00 0.00 0.00 3.06
119 120 7.307396 CGAAACACATTGAAGTTGACTATCACT 60.307 37.037 0.00 0.00 0.00 3.41
120 121 7.807977 AACACATTGAAGTTGACTATCACTT 57.192 32.000 0.00 0.00 0.00 3.16
121 122 7.807977 ACACATTGAAGTTGACTATCACTTT 57.192 32.000 0.00 0.00 0.00 2.66
122 123 7.642669 ACACATTGAAGTTGACTATCACTTTG 58.357 34.615 0.00 0.00 0.00 2.77
123 124 7.283127 ACACATTGAAGTTGACTATCACTTTGT 59.717 33.333 0.00 0.00 0.00 2.83
124 125 7.588854 CACATTGAAGTTGACTATCACTTTGTG 59.411 37.037 0.00 0.00 29.26 3.33
125 126 5.673337 TGAAGTTGACTATCACTTTGTGC 57.327 39.130 0.00 0.00 32.98 4.57
126 127 4.211164 TGAAGTTGACTATCACTTTGTGCG 59.789 41.667 0.00 0.00 32.98 5.34
127 128 3.728845 AGTTGACTATCACTTTGTGCGT 58.271 40.909 0.00 0.00 32.98 5.24
128 129 3.494626 AGTTGACTATCACTTTGTGCGTG 59.505 43.478 0.00 0.00 32.98 5.34
129 130 3.378911 TGACTATCACTTTGTGCGTGA 57.621 42.857 0.00 0.00 44.59 4.35
130 131 3.723260 TGACTATCACTTTGTGCGTGAA 58.277 40.909 0.00 0.00 43.80 3.18
131 132 3.493129 TGACTATCACTTTGTGCGTGAAC 59.507 43.478 0.00 0.00 43.80 3.18
132 133 2.475111 ACTATCACTTTGTGCGTGAACG 59.525 45.455 0.00 0.00 43.80 3.95
133 134 1.295792 ATCACTTTGTGCGTGAACGT 58.704 45.000 4.59 0.00 43.80 3.99
134 135 0.371989 TCACTTTGTGCGTGAACGTG 59.628 50.000 4.59 0.00 38.36 4.49
135 136 0.096281 CACTTTGTGCGTGAACGTGT 59.904 50.000 4.59 0.00 42.22 4.49
136 137 0.372334 ACTTTGTGCGTGAACGTGTC 59.628 50.000 4.59 0.00 42.22 3.67
137 138 0.650512 CTTTGTGCGTGAACGTGTCT 59.349 50.000 4.59 0.00 42.22 3.41
138 139 0.648441 TTTGTGCGTGAACGTGTCTC 59.352 50.000 4.59 0.00 42.22 3.36
139 140 0.179121 TTGTGCGTGAACGTGTCTCT 60.179 50.000 4.59 0.00 42.22 3.10
140 141 0.594028 TGTGCGTGAACGTGTCTCTC 60.594 55.000 4.59 0.00 42.22 3.20
141 142 0.594028 GTGCGTGAACGTGTCTCTCA 60.594 55.000 4.59 0.00 42.22 3.27
142 143 0.317854 TGCGTGAACGTGTCTCTCAG 60.318 55.000 4.59 0.00 42.22 3.35
143 144 0.040336 GCGTGAACGTGTCTCTCAGA 60.040 55.000 4.59 0.00 42.22 3.27
144 145 1.599667 GCGTGAACGTGTCTCTCAGAA 60.600 52.381 4.59 0.00 42.22 3.02
145 146 2.311462 CGTGAACGTGTCTCTCAGAAG 58.689 52.381 0.00 0.00 34.11 2.85
146 147 2.031944 CGTGAACGTGTCTCTCAGAAGA 60.032 50.000 0.00 0.00 34.11 2.87
147 148 3.548214 CGTGAACGTGTCTCTCAGAAGAA 60.548 47.826 0.00 0.00 34.11 2.52
148 149 4.360563 GTGAACGTGTCTCTCAGAAGAAA 58.639 43.478 0.00 0.00 0.00 2.52
149 150 4.207429 GTGAACGTGTCTCTCAGAAGAAAC 59.793 45.833 0.00 0.00 31.24 2.78
150 151 4.098044 TGAACGTGTCTCTCAGAAGAAACT 59.902 41.667 0.00 0.00 32.23 2.66
151 152 5.298527 TGAACGTGTCTCTCAGAAGAAACTA 59.701 40.000 0.00 0.00 32.23 2.24
152 153 5.110940 ACGTGTCTCTCAGAAGAAACTAC 57.889 43.478 0.00 0.00 32.23 2.73
153 154 4.579340 ACGTGTCTCTCAGAAGAAACTACA 59.421 41.667 0.00 0.00 32.23 2.74
154 155 5.150683 CGTGTCTCTCAGAAGAAACTACAG 58.849 45.833 0.00 0.00 32.23 2.74
155 156 5.049336 CGTGTCTCTCAGAAGAAACTACAGA 60.049 44.000 0.00 0.00 32.23 3.41
156 157 6.348950 CGTGTCTCTCAGAAGAAACTACAGAT 60.349 42.308 0.00 0.00 32.23 2.90
157 158 7.027161 GTGTCTCTCAGAAGAAACTACAGATC 58.973 42.308 0.00 0.00 31.79 2.75
158 159 6.717084 TGTCTCTCAGAAGAAACTACAGATCA 59.283 38.462 0.00 0.00 0.00 2.92
159 160 7.231519 TGTCTCTCAGAAGAAACTACAGATCAA 59.768 37.037 0.00 0.00 0.00 2.57
160 161 7.754924 GTCTCTCAGAAGAAACTACAGATCAAG 59.245 40.741 0.00 0.00 0.00 3.02
161 162 7.450014 TCTCTCAGAAGAAACTACAGATCAAGT 59.550 37.037 0.00 0.00 0.00 3.16
162 163 7.957002 TCTCAGAAGAAACTACAGATCAAGTT 58.043 34.615 0.00 0.00 37.54 2.66
163 164 8.424918 TCTCAGAAGAAACTACAGATCAAGTTT 58.575 33.333 16.26 16.26 45.99 2.66
164 165 9.698309 CTCAGAAGAAACTACAGATCAAGTTTA 57.302 33.333 16.28 4.51 43.97 2.01
173 174 9.793259 AACTACAGATCAAGTTTATTTCTTCCA 57.207 29.630 0.00 0.00 32.00 3.53
174 175 9.793259 ACTACAGATCAAGTTTATTTCTTCCAA 57.207 29.630 0.00 0.00 0.00 3.53
176 177 8.115490 ACAGATCAAGTTTATTTCTTCCAAGG 57.885 34.615 0.00 0.00 0.00 3.61
177 178 7.944554 ACAGATCAAGTTTATTTCTTCCAAGGA 59.055 33.333 0.00 0.00 0.00 3.36
178 179 8.964772 CAGATCAAGTTTATTTCTTCCAAGGAT 58.035 33.333 0.00 0.00 0.00 3.24
179 180 9.183368 AGATCAAGTTTATTTCTTCCAAGGATC 57.817 33.333 0.00 0.00 0.00 3.36
180 181 8.884124 ATCAAGTTTATTTCTTCCAAGGATCA 57.116 30.769 0.00 0.00 0.00 2.92
181 182 8.704849 TCAAGTTTATTTCTTCCAAGGATCAA 57.295 30.769 0.00 0.00 0.00 2.57
182 183 8.576442 TCAAGTTTATTTCTTCCAAGGATCAAC 58.424 33.333 0.00 0.00 0.00 3.18
183 184 8.579863 CAAGTTTATTTCTTCCAAGGATCAACT 58.420 33.333 0.00 0.00 0.00 3.16
184 185 8.712228 AGTTTATTTCTTCCAAGGATCAACTT 57.288 30.769 0.00 0.00 0.00 2.66
185 186 8.579863 AGTTTATTTCTTCCAAGGATCAACTTG 58.420 33.333 5.08 5.08 45.71 3.16
186 187 4.853924 TTTCTTCCAAGGATCAACTTGC 57.146 40.909 6.27 0.00 44.98 4.01
187 188 3.795688 TCTTCCAAGGATCAACTTGCT 57.204 42.857 6.27 0.00 44.98 3.91
188 189 3.415212 TCTTCCAAGGATCAACTTGCTG 58.585 45.455 6.27 0.70 44.98 4.41
189 190 3.072915 TCTTCCAAGGATCAACTTGCTGA 59.927 43.478 6.27 2.53 44.98 4.26
190 191 2.783135 TCCAAGGATCAACTTGCTGAC 58.217 47.619 6.27 0.00 44.98 3.51
191 192 2.106338 TCCAAGGATCAACTTGCTGACA 59.894 45.455 6.27 0.00 44.98 3.58
192 193 3.087031 CCAAGGATCAACTTGCTGACAT 58.913 45.455 6.27 0.00 44.98 3.06
193 194 3.128242 CCAAGGATCAACTTGCTGACATC 59.872 47.826 6.27 0.00 44.98 3.06
194 195 3.996921 AGGATCAACTTGCTGACATCT 57.003 42.857 0.00 0.00 0.00 2.90
195 196 4.298103 AGGATCAACTTGCTGACATCTT 57.702 40.909 0.00 0.00 0.00 2.40
196 197 4.260170 AGGATCAACTTGCTGACATCTTC 58.740 43.478 0.00 0.00 0.00 2.87
197 198 4.005650 GGATCAACTTGCTGACATCTTCA 58.994 43.478 0.00 0.00 0.00 3.02
198 199 4.142730 GGATCAACTTGCTGACATCTTCAC 60.143 45.833 0.00 0.00 0.00 3.18
199 200 3.141398 TCAACTTGCTGACATCTTCACC 58.859 45.455 0.00 0.00 0.00 4.02
200 201 2.880268 CAACTTGCTGACATCTTCACCA 59.120 45.455 0.00 0.00 0.00 4.17
201 202 3.213206 ACTTGCTGACATCTTCACCAA 57.787 42.857 0.00 0.00 30.51 3.67
202 203 3.144506 ACTTGCTGACATCTTCACCAAG 58.855 45.455 7.48 7.48 46.91 3.61
203 204 1.527034 TGCTGACATCTTCACCAAGC 58.473 50.000 0.00 0.00 0.00 4.01
204 205 0.807496 GCTGACATCTTCACCAAGCC 59.193 55.000 0.00 0.00 0.00 4.35
205 206 1.883638 GCTGACATCTTCACCAAGCCA 60.884 52.381 0.00 0.00 0.00 4.75
206 207 2.719739 CTGACATCTTCACCAAGCCAT 58.280 47.619 0.00 0.00 0.00 4.40
207 208 3.087031 CTGACATCTTCACCAAGCCATT 58.913 45.455 0.00 0.00 0.00 3.16
208 209 2.821378 TGACATCTTCACCAAGCCATTG 59.179 45.455 0.00 0.00 36.09 2.82
209 210 1.547372 ACATCTTCACCAAGCCATTGC 59.453 47.619 0.00 0.00 34.91 3.56
210 211 1.134907 CATCTTCACCAAGCCATTGCC 60.135 52.381 0.00 0.00 38.69 4.52
211 212 0.112995 TCTTCACCAAGCCATTGCCT 59.887 50.000 0.00 0.00 38.69 4.75
212 213 0.971386 CTTCACCAAGCCATTGCCTT 59.029 50.000 0.00 0.00 38.69 4.35
213 214 1.345415 CTTCACCAAGCCATTGCCTTT 59.655 47.619 0.00 0.00 38.69 3.11
214 215 0.680618 TCACCAAGCCATTGCCTTTG 59.319 50.000 0.00 0.00 38.69 2.77
215 216 0.952010 CACCAAGCCATTGCCTTTGC 60.952 55.000 0.00 0.00 38.69 3.68
216 217 1.376295 CCAAGCCATTGCCTTTGCC 60.376 57.895 0.00 0.00 38.69 4.52
217 218 1.371932 CAAGCCATTGCCTTTGCCA 59.628 52.632 0.00 0.00 38.69 4.92
218 219 0.952010 CAAGCCATTGCCTTTGCCAC 60.952 55.000 0.00 0.00 38.69 5.01
219 220 1.409251 AAGCCATTGCCTTTGCCACA 61.409 50.000 0.00 0.00 38.69 4.17
220 221 1.375013 GCCATTGCCTTTGCCACAG 60.375 57.895 0.00 0.00 36.33 3.66
221 222 2.051941 CCATTGCCTTTGCCACAGT 58.948 52.632 0.00 0.00 36.33 3.55
222 223 0.393820 CCATTGCCTTTGCCACAGTT 59.606 50.000 0.00 0.00 36.33 3.16
223 224 1.202675 CCATTGCCTTTGCCACAGTTT 60.203 47.619 0.00 0.00 36.33 2.66
224 225 1.868498 CATTGCCTTTGCCACAGTTTG 59.132 47.619 0.00 0.00 36.33 2.93
225 226 1.189752 TTGCCTTTGCCACAGTTTGA 58.810 45.000 0.00 0.00 36.33 2.69
226 227 0.746063 TGCCTTTGCCACAGTTTGAG 59.254 50.000 0.00 0.00 36.33 3.02
227 228 1.032014 GCCTTTGCCACAGTTTGAGA 58.968 50.000 0.00 0.00 0.00 3.27
228 229 1.269257 GCCTTTGCCACAGTTTGAGAC 60.269 52.381 0.00 0.00 0.00 3.36
229 230 2.301346 CCTTTGCCACAGTTTGAGACT 58.699 47.619 0.00 0.00 39.89 3.24
230 231 2.689983 CCTTTGCCACAGTTTGAGACTT 59.310 45.455 0.00 0.00 36.10 3.01
231 232 3.489738 CCTTTGCCACAGTTTGAGACTTG 60.490 47.826 0.00 0.00 36.10 3.16
232 233 1.024271 TGCCACAGTTTGAGACTTGC 58.976 50.000 0.00 0.00 36.10 4.01
233 234 1.024271 GCCACAGTTTGAGACTTGCA 58.976 50.000 0.00 0.00 36.10 4.08
234 235 1.405105 GCCACAGTTTGAGACTTGCAA 59.595 47.619 0.00 0.00 36.10 4.08
235 236 2.542411 GCCACAGTTTGAGACTTGCAAG 60.542 50.000 24.84 24.84 36.10 4.01
236 237 2.542411 CCACAGTTTGAGACTTGCAAGC 60.542 50.000 26.27 18.03 36.10 4.01
237 238 1.331756 ACAGTTTGAGACTTGCAAGCG 59.668 47.619 26.27 5.15 36.10 4.68
238 239 0.308993 AGTTTGAGACTTGCAAGCGC 59.691 50.000 26.27 19.30 33.92 5.92
249 250 2.482326 GCAAGCGCAATCTTACCCT 58.518 52.632 11.47 0.00 38.36 4.34
250 251 0.811281 GCAAGCGCAATCTTACCCTT 59.189 50.000 11.47 0.00 38.36 3.95
251 252 1.202348 GCAAGCGCAATCTTACCCTTT 59.798 47.619 11.47 0.00 38.36 3.11
252 253 2.352715 GCAAGCGCAATCTTACCCTTTT 60.353 45.455 11.47 0.00 38.36 2.27
253 254 3.119637 GCAAGCGCAATCTTACCCTTTTA 60.120 43.478 11.47 0.00 38.36 1.52
254 255 4.662145 CAAGCGCAATCTTACCCTTTTAG 58.338 43.478 11.47 0.00 0.00 1.85
255 256 4.216411 AGCGCAATCTTACCCTTTTAGA 57.784 40.909 11.47 0.00 0.00 2.10
256 257 4.781934 AGCGCAATCTTACCCTTTTAGAT 58.218 39.130 11.47 0.00 0.00 1.98
257 258 5.193679 AGCGCAATCTTACCCTTTTAGATT 58.806 37.500 11.47 0.00 38.74 2.40
258 259 5.297029 AGCGCAATCTTACCCTTTTAGATTC 59.703 40.000 11.47 0.00 36.70 2.52
259 260 5.065988 GCGCAATCTTACCCTTTTAGATTCA 59.934 40.000 0.30 0.00 36.70 2.57
260 261 6.238759 GCGCAATCTTACCCTTTTAGATTCAT 60.239 38.462 0.30 0.00 36.70 2.57
261 262 7.682021 GCGCAATCTTACCCTTTTAGATTCATT 60.682 37.037 0.30 0.00 36.70 2.57
262 263 8.836413 CGCAATCTTACCCTTTTAGATTCATTA 58.164 33.333 0.00 0.00 36.70 1.90
270 271 8.581253 ACCCTTTTAGATTCATTAGAAAGTGG 57.419 34.615 0.00 0.00 37.29 4.00
271 272 7.122799 ACCCTTTTAGATTCATTAGAAAGTGGC 59.877 37.037 0.00 0.00 37.29 5.01
272 273 7.340487 CCCTTTTAGATTCATTAGAAAGTGGCT 59.660 37.037 0.00 0.00 37.29 4.75
273 274 9.396022 CCTTTTAGATTCATTAGAAAGTGGCTA 57.604 33.333 0.00 0.00 37.29 3.93
279 280 9.118300 AGATTCATTAGAAAGTGGCTAAGATTG 57.882 33.333 0.00 0.00 37.29 2.67
280 281 9.113838 GATTCATTAGAAAGTGGCTAAGATTGA 57.886 33.333 0.00 0.00 37.29 2.57
281 282 8.498054 TTCATTAGAAAGTGGCTAAGATTGAG 57.502 34.615 0.00 0.00 31.94 3.02
282 283 7.050377 TCATTAGAAAGTGGCTAAGATTGAGG 58.950 38.462 0.00 0.00 31.94 3.86
283 284 4.227864 AGAAAGTGGCTAAGATTGAGGG 57.772 45.455 0.00 0.00 0.00 4.30
284 285 3.846588 AGAAAGTGGCTAAGATTGAGGGA 59.153 43.478 0.00 0.00 0.00 4.20
285 286 3.922171 AAGTGGCTAAGATTGAGGGAG 57.078 47.619 0.00 0.00 0.00 4.30
286 287 2.122768 AGTGGCTAAGATTGAGGGAGG 58.877 52.381 0.00 0.00 0.00 4.30
287 288 1.141858 GTGGCTAAGATTGAGGGAGGG 59.858 57.143 0.00 0.00 0.00 4.30
288 289 1.274416 TGGCTAAGATTGAGGGAGGGT 60.274 52.381 0.00 0.00 0.00 4.34
289 290 1.141858 GGCTAAGATTGAGGGAGGGTG 59.858 57.143 0.00 0.00 0.00 4.61
290 291 1.840635 GCTAAGATTGAGGGAGGGTGT 59.159 52.381 0.00 0.00 0.00 4.16
291 292 2.239907 GCTAAGATTGAGGGAGGGTGTT 59.760 50.000 0.00 0.00 0.00 3.32
292 293 3.454812 GCTAAGATTGAGGGAGGGTGTTA 59.545 47.826 0.00 0.00 0.00 2.41
293 294 4.443598 GCTAAGATTGAGGGAGGGTGTTAG 60.444 50.000 0.00 0.00 0.00 2.34
294 295 3.491766 AGATTGAGGGAGGGTGTTAGA 57.508 47.619 0.00 0.00 0.00 2.10
295 296 4.014273 AGATTGAGGGAGGGTGTTAGAT 57.986 45.455 0.00 0.00 0.00 1.98
296 297 4.375313 AGATTGAGGGAGGGTGTTAGATT 58.625 43.478 0.00 0.00 0.00 2.40
297 298 4.164988 AGATTGAGGGAGGGTGTTAGATTG 59.835 45.833 0.00 0.00 0.00 2.67
298 299 2.915869 TGAGGGAGGGTGTTAGATTGT 58.084 47.619 0.00 0.00 0.00 2.71
299 300 4.069312 TGAGGGAGGGTGTTAGATTGTA 57.931 45.455 0.00 0.00 0.00 2.41
300 301 4.631234 TGAGGGAGGGTGTTAGATTGTAT 58.369 43.478 0.00 0.00 0.00 2.29
301 302 5.036916 TGAGGGAGGGTGTTAGATTGTATT 58.963 41.667 0.00 0.00 0.00 1.89
302 303 5.491078 TGAGGGAGGGTGTTAGATTGTATTT 59.509 40.000 0.00 0.00 0.00 1.40
303 304 6.674861 TGAGGGAGGGTGTTAGATTGTATTTA 59.325 38.462 0.00 0.00 0.00 1.40
304 305 6.896883 AGGGAGGGTGTTAGATTGTATTTAC 58.103 40.000 0.00 0.00 0.00 2.01
305 306 6.445786 AGGGAGGGTGTTAGATTGTATTTACA 59.554 38.462 0.00 0.00 0.00 2.41
306 307 7.128883 AGGGAGGGTGTTAGATTGTATTTACAT 59.871 37.037 0.00 0.00 35.89 2.29
307 308 7.228706 GGGAGGGTGTTAGATTGTATTTACATG 59.771 40.741 0.00 0.00 35.89 3.21
308 309 7.773690 GGAGGGTGTTAGATTGTATTTACATGT 59.226 37.037 2.69 2.69 35.89 3.21
309 310 8.506168 AGGGTGTTAGATTGTATTTACATGTG 57.494 34.615 9.11 0.00 35.89 3.21
310 311 8.107095 AGGGTGTTAGATTGTATTTACATGTGT 58.893 33.333 9.11 0.00 35.89 3.72
311 312 9.386010 GGGTGTTAGATTGTATTTACATGTGTA 57.614 33.333 9.11 0.00 35.89 2.90
332 333 9.299963 TGTGTATATTGTAACGTTGTATACCAC 57.700 33.333 11.99 14.15 30.78 4.16
333 334 8.755018 GTGTATATTGTAACGTTGTATACCACC 58.245 37.037 11.99 6.07 30.78 4.61
334 335 8.694540 TGTATATTGTAACGTTGTATACCACCT 58.305 33.333 11.99 0.00 30.78 4.00
335 336 9.185192 GTATATTGTAACGTTGTATACCACCTC 57.815 37.037 11.99 0.00 0.00 3.85
336 337 5.465532 TTGTAACGTTGTATACCACCTCA 57.534 39.130 11.99 0.00 0.00 3.86
337 338 5.664294 TGTAACGTTGTATACCACCTCAT 57.336 39.130 11.99 0.00 0.00 2.90
338 339 6.040209 TGTAACGTTGTATACCACCTCATT 57.960 37.500 11.99 0.00 0.00 2.57
339 340 7.167924 TGTAACGTTGTATACCACCTCATTA 57.832 36.000 11.99 0.00 0.00 1.90
340 341 7.784037 TGTAACGTTGTATACCACCTCATTAT 58.216 34.615 11.99 0.00 0.00 1.28
341 342 8.911965 TGTAACGTTGTATACCACCTCATTATA 58.088 33.333 11.99 0.00 0.00 0.98
342 343 9.918630 GTAACGTTGTATACCACCTCATTATAT 57.081 33.333 11.99 0.00 0.00 0.86
363 364 7.814693 ATATATATATGTGATAGGCCACCCC 57.185 40.000 5.01 0.00 36.26 4.95
379 380 2.584608 CCTAGAGGGTTGTGCCGG 59.415 66.667 0.00 0.00 38.44 6.13
380 381 2.291043 CCTAGAGGGTTGTGCCGGT 61.291 63.158 1.90 0.00 38.44 5.28
381 382 1.218316 CTAGAGGGTTGTGCCGGTC 59.782 63.158 1.90 0.00 38.44 4.79
382 383 2.240162 CTAGAGGGTTGTGCCGGTCC 62.240 65.000 1.90 0.00 38.44 4.46
383 384 4.717313 GAGGGTTGTGCCGGTCCC 62.717 72.222 1.90 7.95 40.16 4.46
402 403 2.532250 CCCCCAAAGCCTATTGTCTT 57.468 50.000 0.00 0.00 0.00 3.01
403 404 3.662759 CCCCCAAAGCCTATTGTCTTA 57.337 47.619 0.00 0.00 0.00 2.10
404 405 3.288092 CCCCCAAAGCCTATTGTCTTAC 58.712 50.000 0.00 0.00 0.00 2.34
405 406 3.308832 CCCCCAAAGCCTATTGTCTTACA 60.309 47.826 0.00 0.00 0.00 2.41
406 407 3.947834 CCCCAAAGCCTATTGTCTTACAG 59.052 47.826 0.00 0.00 0.00 2.74
410 411 6.127897 CCCAAAGCCTATTGTCTTACAGAAAG 60.128 42.308 0.00 0.00 36.45 2.62
416 417 6.092807 GCCTATTGTCTTACAGAAAGGAACAG 59.907 42.308 7.98 0.00 35.75 3.16
435 436 5.597813 ACAGTGCACTTTTCTAAATCGAG 57.402 39.130 18.94 3.35 0.00 4.04
440 441 3.127030 GCACTTTTCTAAATCGAGTGGGG 59.873 47.826 0.00 0.00 38.46 4.96
454 455 4.010349 CGAGTGGGGCTTAAGAAATCTTT 58.990 43.478 6.67 0.00 37.40 2.52
458 459 7.497909 CGAGTGGGGCTTAAGAAATCTTTTATA 59.502 37.037 6.67 0.00 37.40 0.98
564 566 1.078759 CTACTCGTCAAGCTTGCGGG 61.079 60.000 29.24 29.24 35.40 6.13
813 849 0.096628 CTGTAGGACGACGACGAAGG 59.903 60.000 15.32 0.00 42.66 3.46
991 1033 1.410004 ATAAACCCTCGCTCGATCCA 58.590 50.000 0.00 0.00 0.00 3.41
1045 1092 2.359230 GTTTGCCAGAGCTCGCCT 60.359 61.111 8.37 0.00 40.80 5.52
1057 1104 2.688666 TCGCCTCCTCCATTGCCT 60.689 61.111 0.00 0.00 0.00 4.75
1073 1120 0.809241 GCCTGAGCTTGATCGAGTGG 60.809 60.000 11.71 9.65 35.50 4.00
1081 1128 2.408022 GATCGAGTGGTCGGTCGG 59.592 66.667 0.00 0.00 45.99 4.79
1082 1129 2.360852 ATCGAGTGGTCGGTCGGT 60.361 61.111 0.00 0.00 46.80 4.69
1083 1130 2.320339 GATCGAGTGGTCGGTCGGTC 62.320 65.000 0.00 0.00 45.99 4.79
1084 1131 4.456253 CGAGTGGTCGGTCGGTCG 62.456 72.222 0.00 0.00 42.87 4.79
1085 1132 4.112341 GAGTGGTCGGTCGGTCGG 62.112 72.222 0.00 0.00 0.00 4.79
1086 1133 4.962836 AGTGGTCGGTCGGTCGGT 62.963 66.667 0.00 0.00 0.00 4.69
1587 1634 2.521771 GGCGTGCGCGATCATGTAA 61.522 57.895 26.19 0.00 43.06 2.41
1604 1651 3.341823 TGTAACTCCTCACTAGGTCGAC 58.658 50.000 7.13 7.13 44.09 4.20
1637 1684 2.989166 CGTTCCGTTTGGTAACTCCTAC 59.011 50.000 0.00 0.00 37.07 3.18
1659 1706 5.689835 ACTAGTACCTAGGTAGTAACTGCC 58.310 45.833 28.62 13.82 38.30 4.85
1685 1732 8.928733 CACGTATGTATGTATATTTGGGTTACC 58.071 37.037 0.00 0.00 37.24 2.85
1812 1868 3.978193 TGCTTGGGGCCGGTCAAT 61.978 61.111 9.07 0.00 40.92 2.57
1904 1960 2.470362 CCCATTCTGCTCTGCTGCG 61.470 63.158 0.00 0.00 35.36 5.18
1957 2013 2.513897 GCATTACGCCGGGCTCTT 60.514 61.111 18.34 3.60 32.94 2.85
1958 2014 2.112815 GCATTACGCCGGGCTCTTT 61.113 57.895 18.34 0.92 32.94 2.52
1959 2015 0.812412 GCATTACGCCGGGCTCTTTA 60.812 55.000 18.34 0.00 32.94 1.85
1960 2016 1.217882 CATTACGCCGGGCTCTTTAG 58.782 55.000 18.34 2.34 0.00 1.85
1985 2041 1.257743 GGGAATGATCCTCGATCGGA 58.742 55.000 16.41 5.85 45.77 4.55
1995 2051 1.729470 CTCGATCGGAGTCCTGGTGG 61.729 65.000 16.41 0.00 38.02 4.61
2004 2060 2.118732 TCCTGGTGGCTCGGTGTA 59.881 61.111 0.00 0.00 0.00 2.90
2006 2062 2.283529 CCTGGTGGCTCGGTGTACT 61.284 63.158 0.00 0.00 0.00 2.73
2007 2063 1.079819 CTGGTGGCTCGGTGTACTG 60.080 63.158 0.00 0.00 0.00 2.74
2008 2064 1.816863 CTGGTGGCTCGGTGTACTGT 61.817 60.000 0.00 0.00 0.00 3.55
2009 2065 1.080025 GGTGGCTCGGTGTACTGTC 60.080 63.158 0.00 0.00 0.00 3.51
2010 2066 1.080025 GTGGCTCGGTGTACTGTCC 60.080 63.158 0.00 0.00 0.00 4.02
2011 2067 2.181021 GGCTCGGTGTACTGTCCG 59.819 66.667 14.95 14.95 46.93 4.79
2012 2068 2.181021 GCTCGGTGTACTGTCCGG 59.819 66.667 18.73 0.00 45.79 5.14
2013 2069 2.633509 GCTCGGTGTACTGTCCGGT 61.634 63.158 18.73 0.00 45.79 5.28
2014 2070 1.211969 CTCGGTGTACTGTCCGGTG 59.788 63.158 18.73 11.57 45.79 4.94
2075 2134 2.696187 GCCACCAGTTTTTAACCTCCAA 59.304 45.455 0.00 0.00 0.00 3.53
2076 2135 3.133183 GCCACCAGTTTTTAACCTCCAAA 59.867 43.478 0.00 0.00 0.00 3.28
2112 2171 0.824759 GAGGCCACCTAAGATCACGT 59.175 55.000 5.01 0.00 31.76 4.49
2114 2173 0.535335 GGCCACCTAAGATCACGTCA 59.465 55.000 0.00 0.00 0.00 4.35
2120 2179 2.501723 ACCTAAGATCACGTCATTGCCT 59.498 45.455 0.00 0.00 0.00 4.75
2154 2214 1.377202 GAACTGATCTTGCCCGGCA 60.377 57.895 8.43 8.43 36.47 5.69
2274 2338 8.631480 ATTTCCTTTCTTTACAAGAACCGTAT 57.369 30.769 0.00 0.00 46.53 3.06
2290 2354 8.325421 AGAACCGTATGTAGTGATCTATGTAG 57.675 38.462 0.00 0.00 0.00 2.74
2316 2380 7.639039 CAATTCTACAGAAACAAGTTAGTGCA 58.361 34.615 0.00 0.00 37.61 4.57
2346 2410 8.429237 TTTTAGGAAGAATTTCTGGCCAATTA 57.571 30.769 7.01 0.00 33.68 1.40
2366 2430 5.850557 TTATTGGTTTGATGTATGCCTGG 57.149 39.130 0.00 0.00 0.00 4.45
2378 2442 4.460263 TGTATGCCTGGATGATAACCAAC 58.540 43.478 0.00 0.00 36.95 3.77
2380 2444 1.638070 TGCCTGGATGATAACCAACCA 59.362 47.619 0.00 0.00 44.27 3.67
2381 2445 2.244510 TGCCTGGATGATAACCAACCAT 59.755 45.455 0.00 0.00 45.16 3.55
2382 2446 2.887152 GCCTGGATGATAACCAACCATC 59.113 50.000 0.00 0.00 45.16 3.51
2383 2447 3.688126 GCCTGGATGATAACCAACCATCA 60.688 47.826 0.00 0.00 45.16 3.07
2384 2448 4.535781 CCTGGATGATAACCAACCATCAA 58.464 43.478 0.00 0.00 45.16 2.57
2385 2449 5.142639 CCTGGATGATAACCAACCATCAAT 58.857 41.667 0.00 0.00 45.16 2.57
2428 2497 9.606631 AAAATAAAAATAAAATCGCCATAGCCA 57.393 25.926 0.00 0.00 34.57 4.75
2429 2498 9.606631 AAATAAAAATAAAATCGCCATAGCCAA 57.393 25.926 0.00 0.00 34.57 4.52
2430 2499 9.606631 AATAAAAATAAAATCGCCATAGCCAAA 57.393 25.926 0.00 0.00 34.57 3.28
2431 2500 7.913674 AAAAATAAAATCGCCATAGCCAAAA 57.086 28.000 0.00 0.00 34.57 2.44
2432 2501 8.504812 AAAAATAAAATCGCCATAGCCAAAAT 57.495 26.923 0.00 0.00 34.57 1.82
2433 2502 7.713764 AAATAAAATCGCCATAGCCAAAATC 57.286 32.000 0.00 0.00 34.57 2.17
2450 2519 0.924823 ATCCTGGCTCTTGCTTGGAT 59.075 50.000 8.55 8.55 41.95 3.41
2489 2558 8.856153 TTGGCAAGTATTATAACAAACTCTCA 57.144 30.769 0.00 0.00 0.00 3.27
2490 2559 8.856153 TGGCAAGTATTATAACAAACTCTCAA 57.144 30.769 0.00 0.00 0.00 3.02
2501 2572 5.262588 ACAAACTCTCAACATTTGTTCCC 57.737 39.130 0.00 0.00 42.43 3.97
2502 2573 4.709397 ACAAACTCTCAACATTTGTTCCCA 59.291 37.500 0.00 0.00 42.43 4.37
2509 2580 3.766591 TCAACATTTGTTCCCACAACACT 59.233 39.130 0.00 0.00 42.87 3.55
2513 2584 4.707448 ACATTTGTTCCCACAACACTAACA 59.293 37.500 0.00 0.00 42.87 2.41
2514 2585 5.186021 ACATTTGTTCCCACAACACTAACAA 59.814 36.000 0.00 0.00 42.87 2.83
2515 2586 5.723672 TTTGTTCCCACAACACTAACAAA 57.276 34.783 7.39 7.39 42.87 2.83
2516 2587 5.723672 TTGTTCCCACAACACTAACAAAA 57.276 34.783 0.00 0.00 38.03 2.44
2517 2588 5.061920 TGTTCCCACAACACTAACAAAAC 57.938 39.130 0.00 0.00 0.00 2.43
2518 2589 4.523173 TGTTCCCACAACACTAACAAAACA 59.477 37.500 0.00 0.00 0.00 2.83
2519 2590 5.186021 TGTTCCCACAACACTAACAAAACAT 59.814 36.000 0.00 0.00 0.00 2.71
2520 2591 5.255710 TCCCACAACACTAACAAAACATG 57.744 39.130 0.00 0.00 0.00 3.21
2521 2592 4.098654 TCCCACAACACTAACAAAACATGG 59.901 41.667 0.00 0.00 0.00 3.66
2522 2593 3.801594 CCACAACACTAACAAAACATGGC 59.198 43.478 0.00 0.00 0.00 4.40
2523 2594 4.428209 CACAACACTAACAAAACATGGCA 58.572 39.130 0.00 0.00 0.00 4.92
2598 2669 5.232463 CACCATTATTGAGCTTTGTTGCTT 58.768 37.500 0.00 0.00 44.17 3.91
2610 2681 5.630680 AGCTTTGTTGCTTCAAATAACATCG 59.369 36.000 7.17 0.00 40.93 3.84
2654 2725 4.932200 AGCATTCTTGTTAGCAGTGTCTAC 59.068 41.667 0.00 0.00 0.00 2.59
2657 2728 6.631016 CATTCTTGTTAGCAGTGTCTACCTA 58.369 40.000 0.00 0.00 0.00 3.08
2676 2747 4.600111 ACCTATTTTACCTTGGAGACCACA 59.400 41.667 0.00 0.00 30.78 4.17
2992 3078 2.763249 AGCTTGCTTGAAACTTGACG 57.237 45.000 0.00 0.00 0.00 4.35
3139 3249 2.468831 GCTTGATGAACTAGCTCGAGG 58.531 52.381 15.58 0.00 42.35 4.63
3152 3262 1.065851 GCTCGAGGAGGTTGTAGTAGC 59.934 57.143 15.58 0.00 0.00 3.58
3156 3266 2.679837 CGAGGAGGTTGTAGTAGCGTTA 59.320 50.000 0.00 0.00 0.00 3.18
3222 3332 0.796312 CGTGCCATAGTTTGCTCGTT 59.204 50.000 0.00 0.00 39.03 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.397559 GGCTGTGATTGGGGTATACTTAACT 60.398 44.000 2.25 0.00 0.00 2.24
1 2 4.820173 GGCTGTGATTGGGGTATACTTAAC 59.180 45.833 2.25 0.00 0.00 2.01
2 3 4.724798 AGGCTGTGATTGGGGTATACTTAA 59.275 41.667 2.25 0.00 0.00 1.85
3 4 4.303794 AGGCTGTGATTGGGGTATACTTA 58.696 43.478 2.25 0.00 0.00 2.24
4 5 3.123273 AGGCTGTGATTGGGGTATACTT 58.877 45.455 2.25 0.00 0.00 2.24
5 6 2.706190 GAGGCTGTGATTGGGGTATACT 59.294 50.000 2.25 0.00 0.00 2.12
6 7 2.224548 GGAGGCTGTGATTGGGGTATAC 60.225 54.545 0.00 0.00 0.00 1.47
7 8 2.054799 GGAGGCTGTGATTGGGGTATA 58.945 52.381 0.00 0.00 0.00 1.47
8 9 0.846693 GGAGGCTGTGATTGGGGTAT 59.153 55.000 0.00 0.00 0.00 2.73
9 10 0.253160 AGGAGGCTGTGATTGGGGTA 60.253 55.000 0.00 0.00 0.00 3.69
10 11 1.542375 AGGAGGCTGTGATTGGGGT 60.542 57.895 0.00 0.00 0.00 4.95
11 12 1.077212 CAGGAGGCTGTGATTGGGG 60.077 63.158 0.00 0.00 0.00 4.96
12 13 0.038744 AACAGGAGGCTGTGATTGGG 59.961 55.000 0.00 0.00 37.66 4.12
13 14 1.004044 AGAACAGGAGGCTGTGATTGG 59.996 52.381 0.00 0.00 37.66 3.16
14 15 2.486472 AGAACAGGAGGCTGTGATTG 57.514 50.000 0.00 0.00 37.66 2.67
15 16 3.152341 CAAAGAACAGGAGGCTGTGATT 58.848 45.455 0.00 0.00 37.66 2.57
16 17 2.553904 CCAAAGAACAGGAGGCTGTGAT 60.554 50.000 0.00 0.00 37.66 3.06
17 18 1.202806 CCAAAGAACAGGAGGCTGTGA 60.203 52.381 0.00 0.00 37.66 3.58
18 19 1.242076 CCAAAGAACAGGAGGCTGTG 58.758 55.000 0.00 0.00 37.66 3.66
19 20 0.846693 ACCAAAGAACAGGAGGCTGT 59.153 50.000 0.00 0.00 39.56 4.40
20 21 1.242076 CACCAAAGAACAGGAGGCTG 58.758 55.000 0.00 0.00 0.00 4.85
21 22 0.846693 ACACCAAAGAACAGGAGGCT 59.153 50.000 0.00 0.00 0.00 4.58
22 23 0.954452 CACACCAAAGAACAGGAGGC 59.046 55.000 0.00 0.00 0.00 4.70
23 24 2.638480 TCACACCAAAGAACAGGAGG 57.362 50.000 0.00 0.00 0.00 4.30
24 25 5.063204 TGTTATCACACCAAAGAACAGGAG 58.937 41.667 0.00 0.00 0.00 3.69
25 26 5.042463 TGTTATCACACCAAAGAACAGGA 57.958 39.130 0.00 0.00 0.00 3.86
26 27 5.390885 CGATGTTATCACACCAAAGAACAGG 60.391 44.000 0.00 0.00 35.03 4.00
27 28 5.390885 CCGATGTTATCACACCAAAGAACAG 60.391 44.000 0.00 0.00 35.03 3.16
28 29 4.454161 CCGATGTTATCACACCAAAGAACA 59.546 41.667 0.00 0.00 35.03 3.18
29 30 4.454504 ACCGATGTTATCACACCAAAGAAC 59.545 41.667 0.00 0.00 35.03 3.01
30 31 4.454161 CACCGATGTTATCACACCAAAGAA 59.546 41.667 0.00 0.00 35.03 2.52
31 32 4.000325 CACCGATGTTATCACACCAAAGA 59.000 43.478 0.00 0.00 35.03 2.52
32 33 3.426159 GCACCGATGTTATCACACCAAAG 60.426 47.826 0.00 0.00 35.03 2.77
33 34 2.486203 GCACCGATGTTATCACACCAAA 59.514 45.455 0.00 0.00 35.03 3.28
34 35 2.080693 GCACCGATGTTATCACACCAA 58.919 47.619 0.00 0.00 35.03 3.67
35 36 1.277842 AGCACCGATGTTATCACACCA 59.722 47.619 0.00 0.00 35.03 4.17
36 37 2.024176 AGCACCGATGTTATCACACC 57.976 50.000 0.00 0.00 35.03 4.16
37 38 3.517602 TGTAGCACCGATGTTATCACAC 58.482 45.455 0.00 0.00 35.03 3.82
38 39 3.878160 TGTAGCACCGATGTTATCACA 57.122 42.857 0.00 0.00 37.31 3.58
39 40 4.684703 GGTATGTAGCACCGATGTTATCAC 59.315 45.833 0.00 0.00 0.00 3.06
40 41 4.587262 AGGTATGTAGCACCGATGTTATCA 59.413 41.667 0.00 0.00 41.21 2.15
41 42 5.135508 AGGTATGTAGCACCGATGTTATC 57.864 43.478 0.00 0.00 41.21 1.75
42 43 5.546621 AAGGTATGTAGCACCGATGTTAT 57.453 39.130 0.00 0.00 41.21 1.89
43 44 5.128171 AGAAAGGTATGTAGCACCGATGTTA 59.872 40.000 0.00 0.00 41.21 2.41
44 45 3.906720 AAGGTATGTAGCACCGATGTT 57.093 42.857 0.00 0.00 41.21 2.71
45 46 3.451178 AGAAAGGTATGTAGCACCGATGT 59.549 43.478 0.00 0.00 41.21 3.06
46 47 3.804325 CAGAAAGGTATGTAGCACCGATG 59.196 47.826 0.00 0.00 41.21 3.84
47 48 3.741388 GCAGAAAGGTATGTAGCACCGAT 60.741 47.826 0.00 0.00 41.21 4.18
48 49 2.418197 GCAGAAAGGTATGTAGCACCGA 60.418 50.000 0.00 0.00 41.21 4.69
49 50 1.933853 GCAGAAAGGTATGTAGCACCG 59.066 52.381 0.00 0.00 41.21 4.94
50 51 2.985896 TGCAGAAAGGTATGTAGCACC 58.014 47.619 0.00 0.00 36.22 5.01
51 52 5.449177 GGATTTGCAGAAAGGTATGTAGCAC 60.449 44.000 0.00 0.00 0.00 4.40
52 53 4.640201 GGATTTGCAGAAAGGTATGTAGCA 59.360 41.667 0.00 0.00 0.00 3.49
53 54 4.260784 CGGATTTGCAGAAAGGTATGTAGC 60.261 45.833 0.00 0.00 0.00 3.58
54 55 4.273480 CCGGATTTGCAGAAAGGTATGTAG 59.727 45.833 0.00 0.00 0.00 2.74
55 56 4.196193 CCGGATTTGCAGAAAGGTATGTA 58.804 43.478 0.00 0.00 0.00 2.29
56 57 3.016736 CCGGATTTGCAGAAAGGTATGT 58.983 45.455 0.00 0.00 0.00 2.29
57 58 3.016736 ACCGGATTTGCAGAAAGGTATG 58.983 45.455 9.46 0.00 0.00 2.39
58 59 3.366052 ACCGGATTTGCAGAAAGGTAT 57.634 42.857 9.46 0.00 0.00 2.73
59 60 2.871096 ACCGGATTTGCAGAAAGGTA 57.129 45.000 9.46 0.00 0.00 3.08
60 61 2.871096 TACCGGATTTGCAGAAAGGT 57.129 45.000 9.46 6.81 0.00 3.50
61 62 3.066760 GGAATACCGGATTTGCAGAAAGG 59.933 47.826 9.46 0.00 0.00 3.11
62 63 3.694072 TGGAATACCGGATTTGCAGAAAG 59.306 43.478 9.46 0.00 39.42 2.62
63 64 3.691575 TGGAATACCGGATTTGCAGAAA 58.308 40.909 9.46 0.00 39.42 2.52
64 65 3.358111 TGGAATACCGGATTTGCAGAA 57.642 42.857 9.46 0.00 39.42 3.02
65 66 3.213506 CATGGAATACCGGATTTGCAGA 58.786 45.455 9.46 0.00 39.42 4.26
66 67 2.287788 GCATGGAATACCGGATTTGCAG 60.288 50.000 9.46 7.86 39.42 4.41
67 68 1.680735 GCATGGAATACCGGATTTGCA 59.319 47.619 9.46 13.21 39.42 4.08
68 69 1.000274 GGCATGGAATACCGGATTTGC 60.000 52.381 9.46 10.34 39.42 3.68
69 70 1.613437 GGGCATGGAATACCGGATTTG 59.387 52.381 9.46 0.69 39.42 2.32
70 71 1.817740 CGGGCATGGAATACCGGATTT 60.818 52.381 9.46 0.00 40.88 2.17
71 72 0.250727 CGGGCATGGAATACCGGATT 60.251 55.000 9.46 3.22 40.88 3.01
72 73 1.125093 TCGGGCATGGAATACCGGAT 61.125 55.000 9.46 0.00 43.60 4.18
73 74 1.338890 TTCGGGCATGGAATACCGGA 61.339 55.000 9.46 0.00 43.60 5.14
74 75 1.147376 TTCGGGCATGGAATACCGG 59.853 57.895 0.00 0.00 43.60 5.28
75 76 1.495584 CGTTCGGGCATGGAATACCG 61.496 60.000 0.00 0.00 44.44 4.02
76 77 0.179067 TCGTTCGGGCATGGAATACC 60.179 55.000 0.00 0.00 0.00 2.73
77 78 1.658994 TTCGTTCGGGCATGGAATAC 58.341 50.000 0.00 0.00 0.00 1.89
78 79 2.011222 GTTTCGTTCGGGCATGGAATA 58.989 47.619 0.00 0.00 0.00 1.75
79 80 0.808755 GTTTCGTTCGGGCATGGAAT 59.191 50.000 0.00 0.00 0.00 3.01
80 81 0.535328 TGTTTCGTTCGGGCATGGAA 60.535 50.000 0.00 0.00 0.00 3.53
81 82 1.071642 TGTTTCGTTCGGGCATGGA 59.928 52.632 0.00 0.00 0.00 3.41
82 83 1.209127 GTGTTTCGTTCGGGCATGG 59.791 57.895 0.00 0.00 0.00 3.66
83 84 0.521291 ATGTGTTTCGTTCGGGCATG 59.479 50.000 0.00 0.00 0.00 4.06
84 85 1.068610 CAATGTGTTTCGTTCGGGCAT 60.069 47.619 0.00 0.00 0.00 4.40
85 86 0.309302 CAATGTGTTTCGTTCGGGCA 59.691 50.000 0.00 0.00 0.00 5.36
86 87 0.589223 TCAATGTGTTTCGTTCGGGC 59.411 50.000 0.00 0.00 0.00 6.13
87 88 2.289547 ACTTCAATGTGTTTCGTTCGGG 59.710 45.455 0.00 0.00 0.00 5.14
88 89 3.602390 ACTTCAATGTGTTTCGTTCGG 57.398 42.857 0.00 0.00 0.00 4.30
89 90 4.433304 GTCAACTTCAATGTGTTTCGTTCG 59.567 41.667 0.00 0.00 0.00 3.95
90 91 5.569413 AGTCAACTTCAATGTGTTTCGTTC 58.431 37.500 0.00 0.00 0.00 3.95
91 92 5.560966 AGTCAACTTCAATGTGTTTCGTT 57.439 34.783 0.00 0.00 0.00 3.85
92 93 6.481976 TGATAGTCAACTTCAATGTGTTTCGT 59.518 34.615 0.00 0.00 0.00 3.85
93 94 6.792250 GTGATAGTCAACTTCAATGTGTTTCG 59.208 38.462 0.00 0.00 0.00 3.46
94 95 7.865707 AGTGATAGTCAACTTCAATGTGTTTC 58.134 34.615 0.00 0.00 0.00 2.78
95 96 7.807977 AGTGATAGTCAACTTCAATGTGTTT 57.192 32.000 0.00 0.00 0.00 2.83
96 97 7.807977 AAGTGATAGTCAACTTCAATGTGTT 57.192 32.000 0.00 0.00 0.00 3.32
97 98 7.283127 ACAAAGTGATAGTCAACTTCAATGTGT 59.717 33.333 10.23 10.23 32.66 3.72
98 99 7.588854 CACAAAGTGATAGTCAACTTCAATGTG 59.411 37.037 9.41 9.41 35.23 3.21
99 100 7.642669 CACAAAGTGATAGTCAACTTCAATGT 58.357 34.615 0.00 0.00 35.23 2.71
100 101 6.580041 GCACAAAGTGATAGTCAACTTCAATG 59.420 38.462 0.58 0.00 35.23 2.82
101 102 6.566564 CGCACAAAGTGATAGTCAACTTCAAT 60.567 38.462 0.58 0.00 35.23 2.57
102 103 5.277297 CGCACAAAGTGATAGTCAACTTCAA 60.277 40.000 0.58 0.00 35.23 2.69
103 104 4.211164 CGCACAAAGTGATAGTCAACTTCA 59.789 41.667 0.58 0.00 35.23 3.02
104 105 4.211374 ACGCACAAAGTGATAGTCAACTTC 59.789 41.667 0.58 0.00 35.23 3.01
105 106 4.024893 CACGCACAAAGTGATAGTCAACTT 60.025 41.667 0.58 0.00 41.83 2.66
106 107 3.494626 CACGCACAAAGTGATAGTCAACT 59.505 43.478 0.58 0.00 41.83 3.16
107 108 3.493129 TCACGCACAAAGTGATAGTCAAC 59.507 43.478 0.58 0.00 42.91 3.18
108 109 3.723260 TCACGCACAAAGTGATAGTCAA 58.277 40.909 0.58 0.00 42.91 3.18
109 110 3.378911 TCACGCACAAAGTGATAGTCA 57.621 42.857 0.58 0.00 42.91 3.41
110 111 3.421826 CGTTCACGCACAAAGTGATAGTC 60.422 47.826 0.58 0.00 46.44 2.59
111 112 2.475111 CGTTCACGCACAAAGTGATAGT 59.525 45.455 0.58 0.00 46.44 2.12
112 113 2.475111 ACGTTCACGCACAAAGTGATAG 59.525 45.455 0.58 1.01 46.44 2.08
113 114 2.219903 CACGTTCACGCACAAAGTGATA 59.780 45.455 0.58 0.00 46.44 2.15
114 115 1.003972 CACGTTCACGCACAAAGTGAT 60.004 47.619 0.58 0.00 46.44 3.06
115 116 0.371989 CACGTTCACGCACAAAGTGA 59.628 50.000 0.58 0.00 45.68 3.41
116 117 0.096281 ACACGTTCACGCACAAAGTG 59.904 50.000 0.00 6.24 44.43 3.16
117 118 0.372334 GACACGTTCACGCACAAAGT 59.628 50.000 0.00 0.00 44.43 2.66
118 119 0.650512 AGACACGTTCACGCACAAAG 59.349 50.000 0.00 0.00 44.43 2.77
119 120 0.648441 GAGACACGTTCACGCACAAA 59.352 50.000 0.00 0.00 44.43 2.83
120 121 0.179121 AGAGACACGTTCACGCACAA 60.179 50.000 0.00 0.00 44.43 3.33
121 122 0.594028 GAGAGACACGTTCACGCACA 60.594 55.000 0.00 0.00 44.43 4.57
122 123 0.594028 TGAGAGACACGTTCACGCAC 60.594 55.000 0.00 0.00 44.43 5.34
123 124 0.317854 CTGAGAGACACGTTCACGCA 60.318 55.000 0.00 0.00 44.43 5.24
124 125 0.040336 TCTGAGAGACACGTTCACGC 60.040 55.000 0.00 0.00 44.43 5.34
125 126 2.031944 TCTTCTGAGAGACACGTTCACG 60.032 50.000 0.00 0.00 46.33 4.35
126 127 3.627732 TCTTCTGAGAGACACGTTCAC 57.372 47.619 0.00 0.00 0.00 3.18
127 128 4.098044 AGTTTCTTCTGAGAGACACGTTCA 59.902 41.667 0.00 0.00 38.98 3.18
128 129 4.612943 AGTTTCTTCTGAGAGACACGTTC 58.387 43.478 0.00 0.00 38.98 3.95
129 130 4.657436 AGTTTCTTCTGAGAGACACGTT 57.343 40.909 0.00 0.00 38.98 3.99
130 131 4.579340 TGTAGTTTCTTCTGAGAGACACGT 59.421 41.667 0.84 0.00 38.98 4.49
131 132 5.049336 TCTGTAGTTTCTTCTGAGAGACACG 60.049 44.000 0.84 0.00 38.98 4.49
132 133 6.320494 TCTGTAGTTTCTTCTGAGAGACAC 57.680 41.667 0.84 0.00 38.98 3.67
133 134 6.717084 TGATCTGTAGTTTCTTCTGAGAGACA 59.283 38.462 0.00 0.00 38.98 3.41
134 135 7.151999 TGATCTGTAGTTTCTTCTGAGAGAC 57.848 40.000 0.00 0.00 37.30 3.36
135 136 7.450014 ACTTGATCTGTAGTTTCTTCTGAGAGA 59.550 37.037 0.00 0.00 32.44 3.10
136 137 7.601856 ACTTGATCTGTAGTTTCTTCTGAGAG 58.398 38.462 0.00 0.00 32.44 3.20
137 138 7.531857 ACTTGATCTGTAGTTTCTTCTGAGA 57.468 36.000 0.00 0.00 0.00 3.27
138 139 8.600449 AAACTTGATCTGTAGTTTCTTCTGAG 57.400 34.615 12.42 0.00 39.68 3.35
147 148 9.793259 TGGAAGAAATAAACTTGATCTGTAGTT 57.207 29.630 0.00 0.00 36.20 2.24
148 149 9.793259 TTGGAAGAAATAAACTTGATCTGTAGT 57.207 29.630 0.00 0.00 0.00 2.73
150 151 9.231297 CCTTGGAAGAAATAAACTTGATCTGTA 57.769 33.333 0.00 0.00 0.00 2.74
151 152 7.944554 TCCTTGGAAGAAATAAACTTGATCTGT 59.055 33.333 0.00 0.00 0.00 3.41
152 153 8.340618 TCCTTGGAAGAAATAAACTTGATCTG 57.659 34.615 0.00 0.00 0.00 2.90
153 154 9.183368 GATCCTTGGAAGAAATAAACTTGATCT 57.817 33.333 0.00 0.00 0.00 2.75
154 155 8.960591 TGATCCTTGGAAGAAATAAACTTGATC 58.039 33.333 0.00 0.00 0.00 2.92
155 156 8.884124 TGATCCTTGGAAGAAATAAACTTGAT 57.116 30.769 0.00 0.00 0.00 2.57
156 157 8.576442 GTTGATCCTTGGAAGAAATAAACTTGA 58.424 33.333 0.00 0.00 0.00 3.02
157 158 8.579863 AGTTGATCCTTGGAAGAAATAAACTTG 58.420 33.333 0.00 0.00 27.30 3.16
158 159 8.712228 AGTTGATCCTTGGAAGAAATAAACTT 57.288 30.769 0.00 0.00 27.30 2.66
159 160 8.579863 CAAGTTGATCCTTGGAAGAAATAAACT 58.420 33.333 0.00 0.00 38.51 2.66
160 161 7.329471 GCAAGTTGATCCTTGGAAGAAATAAAC 59.671 37.037 7.16 0.00 41.70 2.01
161 162 7.233348 AGCAAGTTGATCCTTGGAAGAAATAAA 59.767 33.333 7.16 0.00 41.70 1.40
162 163 6.721208 AGCAAGTTGATCCTTGGAAGAAATAA 59.279 34.615 7.16 0.00 41.70 1.40
163 164 6.151648 CAGCAAGTTGATCCTTGGAAGAAATA 59.848 38.462 7.16 0.00 41.70 1.40
164 165 5.047519 CAGCAAGTTGATCCTTGGAAGAAAT 60.048 40.000 7.16 0.00 41.70 2.17
165 166 4.279169 CAGCAAGTTGATCCTTGGAAGAAA 59.721 41.667 7.16 0.00 41.70 2.52
166 167 3.822735 CAGCAAGTTGATCCTTGGAAGAA 59.177 43.478 7.16 0.00 41.70 2.52
167 168 3.072915 TCAGCAAGTTGATCCTTGGAAGA 59.927 43.478 7.16 0.00 41.70 2.87
168 169 3.190118 GTCAGCAAGTTGATCCTTGGAAG 59.810 47.826 7.16 0.00 41.70 3.46
169 170 3.149196 GTCAGCAAGTTGATCCTTGGAA 58.851 45.455 7.16 0.00 41.70 3.53
170 171 2.106338 TGTCAGCAAGTTGATCCTTGGA 59.894 45.455 7.16 0.00 41.70 3.53
171 172 2.507484 TGTCAGCAAGTTGATCCTTGG 58.493 47.619 7.16 0.00 41.70 3.61
172 173 4.008330 AGATGTCAGCAAGTTGATCCTTG 58.992 43.478 7.16 7.21 43.76 3.61
173 174 4.298103 AGATGTCAGCAAGTTGATCCTT 57.702 40.909 7.16 0.00 0.00 3.36
174 175 3.996921 AGATGTCAGCAAGTTGATCCT 57.003 42.857 7.16 0.00 0.00 3.24
175 176 4.005650 TGAAGATGTCAGCAAGTTGATCC 58.994 43.478 7.16 0.00 0.00 3.36
176 177 4.967437 GTGAAGATGTCAGCAAGTTGATC 58.033 43.478 7.16 0.06 36.74 2.92
186 187 2.189594 TGGCTTGGTGAAGATGTCAG 57.810 50.000 0.00 0.00 36.74 3.51
187 188 2.821378 CAATGGCTTGGTGAAGATGTCA 59.179 45.455 0.00 0.00 0.00 3.58
188 189 2.416431 GCAATGGCTTGGTGAAGATGTC 60.416 50.000 0.00 0.00 36.96 3.06
189 190 1.547372 GCAATGGCTTGGTGAAGATGT 59.453 47.619 0.00 0.00 36.96 3.06
190 191 1.134907 GGCAATGGCTTGGTGAAGATG 60.135 52.381 0.00 0.00 40.87 2.90
191 192 1.188863 GGCAATGGCTTGGTGAAGAT 58.811 50.000 0.00 0.00 40.87 2.40
192 193 0.112995 AGGCAATGGCTTGGTGAAGA 59.887 50.000 2.53 0.00 40.87 2.87
193 194 0.971386 AAGGCAATGGCTTGGTGAAG 59.029 50.000 21.46 0.00 46.51 3.02
194 195 3.146218 AAGGCAATGGCTTGGTGAA 57.854 47.368 21.46 0.00 46.51 3.18
195 196 4.950200 AAGGCAATGGCTTGGTGA 57.050 50.000 21.46 0.00 46.51 4.02
201 202 1.823169 CTGTGGCAAAGGCAATGGCT 61.823 55.000 2.53 2.53 43.24 4.75
202 203 1.375013 CTGTGGCAAAGGCAATGGC 60.375 57.895 0.00 0.00 43.71 4.40
203 204 0.393820 AACTGTGGCAAAGGCAATGG 59.606 50.000 9.97 0.00 43.71 3.16
204 205 1.868498 CAAACTGTGGCAAAGGCAATG 59.132 47.619 9.97 0.00 43.71 2.82
205 206 1.761784 TCAAACTGTGGCAAAGGCAAT 59.238 42.857 9.97 0.00 43.71 3.56
206 207 1.136695 CTCAAACTGTGGCAAAGGCAA 59.863 47.619 9.97 0.00 43.71 4.52
207 208 0.746063 CTCAAACTGTGGCAAAGGCA 59.254 50.000 9.97 0.00 43.71 4.75
208 209 1.032014 TCTCAAACTGTGGCAAAGGC 58.968 50.000 9.97 0.00 40.13 4.35
209 210 2.301346 AGTCTCAAACTGTGGCAAAGG 58.699 47.619 9.97 0.00 36.65 3.11
210 211 3.699067 CAAGTCTCAAACTGTGGCAAAG 58.301 45.455 2.28 2.28 38.58 2.77
211 212 2.159254 GCAAGTCTCAAACTGTGGCAAA 60.159 45.455 0.00 0.00 38.58 3.68
212 213 1.405105 GCAAGTCTCAAACTGTGGCAA 59.595 47.619 0.00 0.00 38.58 4.52
213 214 1.024271 GCAAGTCTCAAACTGTGGCA 58.976 50.000 0.00 0.00 38.58 4.92
214 215 1.024271 TGCAAGTCTCAAACTGTGGC 58.976 50.000 0.00 0.00 38.58 5.01
215 216 2.542411 GCTTGCAAGTCTCAAACTGTGG 60.542 50.000 26.55 0.00 38.58 4.17
216 217 2.724349 GCTTGCAAGTCTCAAACTGTG 58.276 47.619 26.55 0.00 38.58 3.66
217 218 1.331756 CGCTTGCAAGTCTCAAACTGT 59.668 47.619 26.55 0.00 38.58 3.55
218 219 1.923316 GCGCTTGCAAGTCTCAAACTG 60.923 52.381 26.55 7.63 38.58 3.16
219 220 0.308993 GCGCTTGCAAGTCTCAAACT 59.691 50.000 26.55 0.00 41.10 2.66
220 221 2.788535 GCGCTTGCAAGTCTCAAAC 58.211 52.632 26.55 8.01 38.92 2.93
231 232 0.811281 AAGGGTAAGATTGCGCTTGC 59.189 50.000 9.73 0.00 42.57 4.01
232 233 3.575965 AAAAGGGTAAGATTGCGCTTG 57.424 42.857 9.73 0.00 43.16 4.01
233 234 4.585879 TCTAAAAGGGTAAGATTGCGCTT 58.414 39.130 9.73 7.07 45.14 4.68
234 235 4.216411 TCTAAAAGGGTAAGATTGCGCT 57.784 40.909 9.73 0.00 37.65 5.92
235 236 5.065988 TGAATCTAAAAGGGTAAGATTGCGC 59.934 40.000 0.00 0.00 39.46 6.09
236 237 6.677781 TGAATCTAAAAGGGTAAGATTGCG 57.322 37.500 1.76 0.00 39.46 4.85
244 245 9.681062 CCACTTTCTAATGAATCTAAAAGGGTA 57.319 33.333 0.00 0.00 31.56 3.69
245 246 7.122799 GCCACTTTCTAATGAATCTAAAAGGGT 59.877 37.037 0.00 0.00 31.56 4.34
246 247 7.340487 AGCCACTTTCTAATGAATCTAAAAGGG 59.660 37.037 0.00 0.00 31.56 3.95
247 248 8.286191 AGCCACTTTCTAATGAATCTAAAAGG 57.714 34.615 0.00 0.00 31.56 3.11
253 254 9.118300 CAATCTTAGCCACTTTCTAATGAATCT 57.882 33.333 0.00 0.00 31.56 2.40
254 255 9.113838 TCAATCTTAGCCACTTTCTAATGAATC 57.886 33.333 0.00 0.00 31.56 2.52
255 256 9.118300 CTCAATCTTAGCCACTTTCTAATGAAT 57.882 33.333 0.00 0.00 31.56 2.57
256 257 7.554118 CCTCAATCTTAGCCACTTTCTAATGAA 59.446 37.037 0.00 0.00 0.00 2.57
257 258 7.050377 CCTCAATCTTAGCCACTTTCTAATGA 58.950 38.462 0.00 0.00 0.00 2.57
258 259 6.261826 CCCTCAATCTTAGCCACTTTCTAATG 59.738 42.308 0.00 0.00 0.00 1.90
259 260 6.158695 TCCCTCAATCTTAGCCACTTTCTAAT 59.841 38.462 0.00 0.00 0.00 1.73
260 261 5.487488 TCCCTCAATCTTAGCCACTTTCTAA 59.513 40.000 0.00 0.00 0.00 2.10
261 262 5.030147 TCCCTCAATCTTAGCCACTTTCTA 58.970 41.667 0.00 0.00 0.00 2.10
262 263 3.846588 TCCCTCAATCTTAGCCACTTTCT 59.153 43.478 0.00 0.00 0.00 2.52
263 264 4.195416 CTCCCTCAATCTTAGCCACTTTC 58.805 47.826 0.00 0.00 0.00 2.62
264 265 3.054065 CCTCCCTCAATCTTAGCCACTTT 60.054 47.826 0.00 0.00 0.00 2.66
265 266 2.507471 CCTCCCTCAATCTTAGCCACTT 59.493 50.000 0.00 0.00 0.00 3.16
266 267 2.122768 CCTCCCTCAATCTTAGCCACT 58.877 52.381 0.00 0.00 0.00 4.00
267 268 1.141858 CCCTCCCTCAATCTTAGCCAC 59.858 57.143 0.00 0.00 0.00 5.01
268 269 1.274416 ACCCTCCCTCAATCTTAGCCA 60.274 52.381 0.00 0.00 0.00 4.75
269 270 1.141858 CACCCTCCCTCAATCTTAGCC 59.858 57.143 0.00 0.00 0.00 3.93
270 271 1.840635 ACACCCTCCCTCAATCTTAGC 59.159 52.381 0.00 0.00 0.00 3.09
271 272 4.962995 TCTAACACCCTCCCTCAATCTTAG 59.037 45.833 0.00 0.00 0.00 2.18
272 273 4.955335 TCTAACACCCTCCCTCAATCTTA 58.045 43.478 0.00 0.00 0.00 2.10
273 274 3.803340 TCTAACACCCTCCCTCAATCTT 58.197 45.455 0.00 0.00 0.00 2.40
274 275 3.491766 TCTAACACCCTCCCTCAATCT 57.508 47.619 0.00 0.00 0.00 2.40
275 276 4.080299 ACAATCTAACACCCTCCCTCAATC 60.080 45.833 0.00 0.00 0.00 2.67
276 277 3.852578 ACAATCTAACACCCTCCCTCAAT 59.147 43.478 0.00 0.00 0.00 2.57
277 278 3.256704 ACAATCTAACACCCTCCCTCAA 58.743 45.455 0.00 0.00 0.00 3.02
278 279 2.915869 ACAATCTAACACCCTCCCTCA 58.084 47.619 0.00 0.00 0.00 3.86
279 280 5.632034 AATACAATCTAACACCCTCCCTC 57.368 43.478 0.00 0.00 0.00 4.30
280 281 6.445786 TGTAAATACAATCTAACACCCTCCCT 59.554 38.462 0.00 0.00 32.40 4.20
281 282 6.655930 TGTAAATACAATCTAACACCCTCCC 58.344 40.000 0.00 0.00 32.40 4.30
282 283 7.773690 ACATGTAAATACAATCTAACACCCTCC 59.226 37.037 0.00 0.00 39.99 4.30
283 284 8.612619 CACATGTAAATACAATCTAACACCCTC 58.387 37.037 0.00 0.00 39.99 4.30
284 285 8.107095 ACACATGTAAATACAATCTAACACCCT 58.893 33.333 0.00 0.00 39.99 4.34
285 286 8.276252 ACACATGTAAATACAATCTAACACCC 57.724 34.615 0.00 0.00 39.99 4.61
306 307 9.299963 GTGGTATACAACGTTACAATATACACA 57.700 33.333 20.89 16.35 32.62 3.72
307 308 8.755018 GGTGGTATACAACGTTACAATATACAC 58.245 37.037 20.89 18.40 32.62 2.90
308 309 8.694540 AGGTGGTATACAACGTTACAATATACA 58.305 33.333 20.89 12.28 43.31 2.29
309 310 9.185192 GAGGTGGTATACAACGTTACAATATAC 57.815 37.037 7.03 10.70 43.31 1.47
310 311 8.911965 TGAGGTGGTATACAACGTTACAATATA 58.088 33.333 7.03 0.00 43.31 0.86
311 312 7.784037 TGAGGTGGTATACAACGTTACAATAT 58.216 34.615 7.03 0.00 43.31 1.28
312 313 7.167924 TGAGGTGGTATACAACGTTACAATA 57.832 36.000 7.03 0.00 43.31 1.90
313 314 6.040209 TGAGGTGGTATACAACGTTACAAT 57.960 37.500 7.03 0.00 43.31 2.71
314 315 5.465532 TGAGGTGGTATACAACGTTACAA 57.534 39.130 7.03 0.00 43.31 2.41
315 316 5.664294 ATGAGGTGGTATACAACGTTACA 57.336 39.130 7.03 2.59 43.31 2.41
316 317 9.918630 ATATAATGAGGTGGTATACAACGTTAC 57.081 33.333 7.03 0.00 43.31 2.50
337 338 9.333961 GGGGTGGCCTATCACATATATATATAA 57.666 37.037 3.32 0.00 39.27 0.98
338 339 8.697529 AGGGGTGGCCTATCACATATATATATA 58.302 37.037 3.32 4.92 39.27 0.86
339 340 7.557283 AGGGGTGGCCTATCACATATATATAT 58.443 38.462 3.32 0.00 39.27 0.86
340 341 6.945371 AGGGGTGGCCTATCACATATATATA 58.055 40.000 3.32 0.00 39.27 0.86
341 342 5.804013 AGGGGTGGCCTATCACATATATAT 58.196 41.667 3.32 0.00 39.27 0.86
342 343 5.235003 AGGGGTGGCCTATCACATATATA 57.765 43.478 3.32 0.00 39.27 0.86
343 344 4.094216 AGGGGTGGCCTATCACATATAT 57.906 45.455 3.32 0.00 39.27 0.86
344 345 3.577968 AGGGGTGGCCTATCACATATA 57.422 47.619 3.32 0.00 39.27 0.86
345 346 2.440494 AGGGGTGGCCTATCACATAT 57.560 50.000 3.32 0.00 39.27 1.78
346 347 2.453212 TCTAGGGGTGGCCTATCACATA 59.547 50.000 3.32 0.00 39.27 2.29
347 348 1.223077 TCTAGGGGTGGCCTATCACAT 59.777 52.381 3.32 0.00 39.27 3.21
348 349 0.639943 TCTAGGGGTGGCCTATCACA 59.360 55.000 3.32 0.00 39.27 3.58
349 350 1.343069 CTCTAGGGGTGGCCTATCAC 58.657 60.000 3.32 0.00 36.95 3.06
350 351 0.191064 CCTCTAGGGGTGGCCTATCA 59.809 60.000 3.32 0.00 0.00 2.15
351 352 3.074788 CCTCTAGGGGTGGCCTATC 57.925 63.158 3.32 0.00 0.00 2.08
362 363 2.240162 GACCGGCACAACCCTCTAGG 62.240 65.000 0.00 0.00 43.78 3.02
363 364 1.218316 GACCGGCACAACCCTCTAG 59.782 63.158 0.00 0.00 33.26 2.43
364 365 2.288025 GGACCGGCACAACCCTCTA 61.288 63.158 0.00 0.00 33.26 2.43
365 366 3.637273 GGACCGGCACAACCCTCT 61.637 66.667 0.00 0.00 33.26 3.69
366 367 4.717313 GGGACCGGCACAACCCTC 62.717 72.222 0.00 0.00 39.28 4.30
383 384 2.532250 AAGACAATAGGCTTTGGGGG 57.468 50.000 0.00 0.00 0.00 5.40
384 385 3.947834 CTGTAAGACAATAGGCTTTGGGG 59.052 47.826 0.00 0.00 34.07 4.96
385 386 4.843728 TCTGTAAGACAATAGGCTTTGGG 58.156 43.478 0.00 0.00 38.67 4.12
399 400 4.127171 GTGCACTGTTCCTTTCTGTAAGA 58.873 43.478 10.32 0.00 44.68 2.10
400 401 4.130118 AGTGCACTGTTCCTTTCTGTAAG 58.870 43.478 20.97 0.00 0.00 2.34
401 402 4.150897 AGTGCACTGTTCCTTTCTGTAA 57.849 40.909 20.97 0.00 0.00 2.41
402 403 3.838244 AGTGCACTGTTCCTTTCTGTA 57.162 42.857 20.97 0.00 0.00 2.74
403 404 2.717639 AGTGCACTGTTCCTTTCTGT 57.282 45.000 20.97 0.00 0.00 3.41
404 405 4.096984 AGAAAAGTGCACTGTTCCTTTCTG 59.903 41.667 35.73 0.00 40.31 3.02
405 406 4.273318 AGAAAAGTGCACTGTTCCTTTCT 58.727 39.130 35.73 30.92 40.31 2.52
406 407 4.639135 AGAAAAGTGCACTGTTCCTTTC 57.361 40.909 35.73 29.58 40.31 2.62
410 411 5.049680 TCGATTTAGAAAAGTGCACTGTTCC 60.050 40.000 35.73 23.18 40.31 3.62
416 417 4.378459 CCCACTCGATTTAGAAAAGTGCAC 60.378 45.833 9.40 9.40 36.79 4.57
435 436 8.914011 ACATATAAAAGATTTCTTAAGCCCCAC 58.086 33.333 0.00 0.00 34.61 4.61
458 459 7.657761 ACATTTTTCTCTCTTTAGTCGTCACAT 59.342 33.333 0.00 0.00 0.00 3.21
564 566 0.879090 CTGGCCTACGGTTTGGTTTC 59.121 55.000 3.32 0.00 0.00 2.78
573 575 1.153349 GGAGCTTTCTGGCCTACGG 60.153 63.158 3.32 0.00 0.00 4.02
704 738 3.016203 CCGTTGCGTTGCGTTGTG 61.016 61.111 0.00 0.00 0.00 3.33
705 739 4.244802 CCCGTTGCGTTGCGTTGT 62.245 61.111 0.00 0.00 0.00 3.32
1045 1092 0.034767 CAAGCTCAGGCAATGGAGGA 60.035 55.000 0.00 0.00 41.70 3.71
1057 1104 0.171231 CGACCACTCGATCAAGCTCA 59.829 55.000 0.00 0.00 43.06 4.26
1084 1131 4.664677 CGATGGATCGGCCCGACC 62.665 72.222 8.62 12.94 45.93 4.79
1293 1340 0.613853 CGGTCACCCTGTTCTCCCTA 60.614 60.000 0.00 0.00 0.00 3.53
1659 1706 8.928733 GGTAACCCAAATATACATACATACGTG 58.071 37.037 0.00 0.00 0.00 4.49
1712 1759 1.295423 CGTGAACCAACCCGGAGAT 59.705 57.895 0.73 0.00 38.63 2.75
1741 1797 2.620112 GGAACGACGACAGGACGGA 61.620 63.158 0.00 0.00 37.61 4.69
1799 1855 1.910580 GAAGAGATTGACCGGCCCCA 61.911 60.000 0.00 0.00 0.00 4.96
1812 1868 2.095461 CCTCATCAGTGGTCGAAGAGA 58.905 52.381 0.00 0.00 36.95 3.10
1904 1960 4.327982 TCATTCCAGATCGATCAACCTC 57.672 45.455 26.47 0.25 0.00 3.85
1953 2009 1.209504 TCATTCCCGGTGGCTAAAGAG 59.790 52.381 0.00 0.00 0.00 2.85
1954 2010 1.281419 TCATTCCCGGTGGCTAAAGA 58.719 50.000 0.00 0.00 0.00 2.52
1955 2011 2.222027 GATCATTCCCGGTGGCTAAAG 58.778 52.381 0.00 0.00 0.00 1.85
1956 2012 1.133915 GGATCATTCCCGGTGGCTAAA 60.134 52.381 0.00 0.00 35.84 1.85
1957 2013 0.472471 GGATCATTCCCGGTGGCTAA 59.528 55.000 0.00 0.00 35.84 3.09
1958 2014 0.399949 AGGATCATTCCCGGTGGCTA 60.400 55.000 0.00 0.00 43.76 3.93
1959 2015 1.694169 AGGATCATTCCCGGTGGCT 60.694 57.895 0.00 0.00 43.76 4.75
1960 2016 1.227973 GAGGATCATTCCCGGTGGC 60.228 63.158 0.00 0.00 43.76 5.01
1961 2017 1.069765 CGAGGATCATTCCCGGTGG 59.930 63.158 0.00 0.00 43.76 4.61
1962 2018 0.681733 ATCGAGGATCATTCCCGGTG 59.318 55.000 0.00 0.00 43.76 4.94
1963 2019 0.969894 GATCGAGGATCATTCCCGGT 59.030 55.000 0.00 0.00 43.76 5.28
1964 2020 0.109086 CGATCGAGGATCATTCCCGG 60.109 60.000 10.26 0.00 43.76 5.73
1965 2021 0.109086 CCGATCGAGGATCATTCCCG 60.109 60.000 18.66 0.00 43.76 5.14
1966 2022 1.203523 CTCCGATCGAGGATCATTCCC 59.796 57.143 18.66 0.00 43.76 3.97
1967 2023 1.889829 ACTCCGATCGAGGATCATTCC 59.110 52.381 18.66 0.00 43.57 3.01
1968 2024 2.094957 GGACTCCGATCGAGGATCATTC 60.095 54.545 18.66 4.70 43.57 2.67
1985 2041 2.725127 TACACCGAGCCACCAGGACT 62.725 60.000 0.00 0.00 36.89 3.85
2004 2060 0.321653 GAGAAATGCCACCGGACAGT 60.322 55.000 9.46 0.00 0.00 3.55
2006 2062 1.002624 GGAGAAATGCCACCGGACA 60.003 57.895 9.46 3.23 0.00 4.02
2007 2063 0.608035 TTGGAGAAATGCCACCGGAC 60.608 55.000 9.46 0.00 34.56 4.79
2008 2064 0.331278 ATTGGAGAAATGCCACCGGA 59.669 50.000 9.46 0.00 34.56 5.14
2009 2065 0.457035 CATTGGAGAAATGCCACCGG 59.543 55.000 0.00 0.00 39.36 5.28
2061 2120 9.731819 CTTTCTTAGAGTTTGGAGGTTAAAAAC 57.268 33.333 0.00 0.00 34.68 2.43
2075 2134 2.573915 CCTCCAGGGCTTTCTTAGAGTT 59.426 50.000 0.00 0.00 0.00 3.01
2076 2135 2.192263 CCTCCAGGGCTTTCTTAGAGT 58.808 52.381 0.00 0.00 0.00 3.24
2120 2179 1.635487 AGTTCTCCCTTGCTGGCATTA 59.365 47.619 0.00 0.00 0.00 1.90
2132 2192 0.462759 CGGGCAAGATCAGTTCTCCC 60.463 60.000 0.00 0.00 35.85 4.30
2154 2214 2.105821 TCAATCACAAAGACCCGACCTT 59.894 45.455 0.00 0.00 0.00 3.50
2194 2257 5.380043 ACTGAAGCTGAAAGATGGAAGAAA 58.620 37.500 0.00 0.00 34.07 2.52
2290 2354 6.578919 GCACTAACTTGTTTCTGTAGAATTGC 59.421 38.462 0.00 0.00 33.54 3.56
2316 2380 9.045745 TGGCCAGAAATTCTTCCTAAAAATTAT 57.954 29.630 0.00 0.00 31.28 1.28
2346 2410 3.979911 TCCAGGCATACATCAAACCAAT 58.020 40.909 0.00 0.00 0.00 3.16
2363 2427 6.772233 TGTATTGATGGTTGGTTATCATCCAG 59.228 38.462 1.60 0.00 45.39 3.86
2404 2473 9.606631 TTTGGCTATGGCGATTTTATTTTTATT 57.393 25.926 0.00 0.00 39.81 1.40
2408 2477 7.226523 GGATTTTGGCTATGGCGATTTTATTTT 59.773 33.333 0.00 0.00 39.81 1.82
2409 2478 6.705825 GGATTTTGGCTATGGCGATTTTATTT 59.294 34.615 0.00 0.00 39.81 1.40
2410 2479 6.041979 AGGATTTTGGCTATGGCGATTTTATT 59.958 34.615 0.00 0.00 39.81 1.40
2411 2480 5.539955 AGGATTTTGGCTATGGCGATTTTAT 59.460 36.000 0.00 0.00 39.81 1.40
2412 2481 4.892934 AGGATTTTGGCTATGGCGATTTTA 59.107 37.500 0.00 0.00 39.81 1.52
2413 2482 3.706086 AGGATTTTGGCTATGGCGATTTT 59.294 39.130 0.00 0.00 39.81 1.82
2414 2483 3.068590 CAGGATTTTGGCTATGGCGATTT 59.931 43.478 0.00 0.00 39.81 2.17
2415 2484 2.624838 CAGGATTTTGGCTATGGCGATT 59.375 45.455 0.00 0.00 39.81 3.34
2416 2485 2.233271 CAGGATTTTGGCTATGGCGAT 58.767 47.619 0.00 0.00 39.81 4.58
2417 2486 1.679139 CAGGATTTTGGCTATGGCGA 58.321 50.000 0.00 0.00 39.81 5.54
2418 2487 0.670162 CCAGGATTTTGGCTATGGCG 59.330 55.000 0.00 0.00 39.81 5.69
2426 2495 1.553706 AGCAAGAGCCAGGATTTTGG 58.446 50.000 9.87 0.00 43.56 3.28
2427 2496 2.353406 CCAAGCAAGAGCCAGGATTTTG 60.353 50.000 3.54 3.54 43.56 2.44
2428 2497 1.897802 CCAAGCAAGAGCCAGGATTTT 59.102 47.619 0.00 0.00 43.56 1.82
2429 2498 1.076024 TCCAAGCAAGAGCCAGGATTT 59.924 47.619 0.00 0.00 43.56 2.17
2430 2499 0.700564 TCCAAGCAAGAGCCAGGATT 59.299 50.000 0.00 0.00 43.56 3.01
2431 2500 0.924823 ATCCAAGCAAGAGCCAGGAT 59.075 50.000 0.00 5.72 44.74 3.24
2432 2501 0.034767 CATCCAAGCAAGAGCCAGGA 60.035 55.000 0.00 0.00 44.90 3.86
2433 2502 0.034767 TCATCCAAGCAAGAGCCAGG 60.035 55.000 0.00 0.00 43.56 4.45
2481 2550 4.709397 TGTGGGAACAAATGTTGAGAGTTT 59.291 37.500 3.05 0.00 46.06 2.66
2488 2557 4.122143 AGTGTTGTGGGAACAAATGTTG 57.878 40.909 3.05 0.00 46.06 3.33
2489 2558 5.186021 TGTTAGTGTTGTGGGAACAAATGTT 59.814 36.000 0.00 0.00 46.06 2.71
2490 2559 4.707448 TGTTAGTGTTGTGGGAACAAATGT 59.293 37.500 0.00 0.00 46.06 2.71
2496 2567 5.061920 TGTTTTGTTAGTGTTGTGGGAAC 57.938 39.130 0.00 0.00 0.00 3.62
2499 2570 4.367450 CCATGTTTTGTTAGTGTTGTGGG 58.633 43.478 0.00 0.00 0.00 4.61
2501 2572 4.428209 TGCCATGTTTTGTTAGTGTTGTG 58.572 39.130 0.00 0.00 0.00 3.33
2502 2573 4.727507 TGCCATGTTTTGTTAGTGTTGT 57.272 36.364 0.00 0.00 0.00 3.32
2509 2580 4.636206 GGTTTTGGTTGCCATGTTTTGTTA 59.364 37.500 0.00 0.00 31.53 2.41
2513 2584 3.643199 AGGTTTTGGTTGCCATGTTTT 57.357 38.095 0.00 0.00 31.53 2.43
2514 2585 3.643199 AAGGTTTTGGTTGCCATGTTT 57.357 38.095 0.00 0.00 31.53 2.83
2515 2586 4.447290 GTTAAGGTTTTGGTTGCCATGTT 58.553 39.130 0.00 0.00 31.53 2.71
2516 2587 3.181459 GGTTAAGGTTTTGGTTGCCATGT 60.181 43.478 0.00 0.00 31.53 3.21
2517 2588 3.398406 GGTTAAGGTTTTGGTTGCCATG 58.602 45.455 0.00 0.00 31.53 3.66
2518 2589 2.036604 CGGTTAAGGTTTTGGTTGCCAT 59.963 45.455 0.00 0.00 31.53 4.40
2519 2590 1.409427 CGGTTAAGGTTTTGGTTGCCA 59.591 47.619 0.00 0.00 0.00 4.92
2520 2591 1.682323 TCGGTTAAGGTTTTGGTTGCC 59.318 47.619 0.00 0.00 0.00 4.52
2521 2592 3.439895 TTCGGTTAAGGTTTTGGTTGC 57.560 42.857 0.00 0.00 0.00 4.17
2522 2593 5.235401 CCAAATTCGGTTAAGGTTTTGGTTG 59.765 40.000 0.00 0.00 38.70 3.77
2523 2594 5.361427 CCAAATTCGGTTAAGGTTTTGGTT 58.639 37.500 0.00 0.00 38.70 3.67
2610 2681 7.281040 TGCTTGATCCCATGAATAATTCTTC 57.719 36.000 0.00 0.00 0.00 2.87
2654 2725 5.174037 TGTGGTCTCCAAGGTAAAATAGG 57.826 43.478 0.00 0.00 34.18 2.57
2657 2728 5.316987 CTCTTGTGGTCTCCAAGGTAAAAT 58.683 41.667 0.00 0.00 39.78 1.82
2676 2747 3.012518 CAATGATTCAAGTCCCGCTCTT 58.987 45.455 0.00 0.00 0.00 2.85
2817 2888 1.378882 AATGCATCAATCGGCGCACT 61.379 50.000 10.83 0.00 37.17 4.40
2992 3078 3.106672 CTCGACTAAGTATCGGCAACAC 58.893 50.000 0.00 0.00 40.05 3.32
3076 3185 4.002982 TGCAAGATGACTTCAAATACGCT 58.997 39.130 0.00 0.00 33.70 5.07
3139 3249 5.454877 CGATTTCTAACGCTACTACAACCTC 59.545 44.000 0.00 0.00 0.00 3.85
3152 3262 5.470845 AAGAAGATTGCCGATTTCTAACG 57.529 39.130 0.00 0.00 30.19 3.18
3156 3266 6.183360 CCCAATAAAGAAGATTGCCGATTTCT 60.183 38.462 0.00 0.00 33.70 2.52
3222 3332 5.441718 AAGAGCCAATGTCAAGGAAGATA 57.558 39.130 0.00 0.00 0.00 1.98


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.