Multiple sequence alignment - TraesCS7B01G283300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G283300 chr7B 100.000 5305 0 0 1 5305 517390907 517396211 0.000000e+00 9797.0
1 TraesCS7B01G283300 chr7B 86.139 202 22 6 4410 4607 249674875 249675074 4.160000e-51 213.0
2 TraesCS7B01G283300 chr7D 93.718 3518 129 30 836 4294 489112078 489115562 0.000000e+00 5188.0
3 TraesCS7B01G283300 chr7D 88.857 350 34 4 1 346 242035832 242035484 4.910000e-115 425.0
4 TraesCS7B01G283300 chr7D 78.374 652 123 14 2 646 19339832 19339192 1.780000e-109 407.0
5 TraesCS7B01G283300 chr7D 93.431 137 8 1 4329 4464 489115811 489115947 9.010000e-48 202.0
6 TraesCS7B01G283300 chr7A 92.424 2125 97 28 834 2925 556297251 556299344 0.000000e+00 2974.0
7 TraesCS7B01G283300 chr7A 93.827 1377 59 11 2975 4329 556299362 556300734 0.000000e+00 2049.0
8 TraesCS7B01G283300 chr7A 84.906 318 24 6 4585 4879 556300865 556301181 3.110000e-77 300.0
9 TraesCS7B01G283300 chr7A 90.045 221 19 3 4960 5177 556301180 556301400 3.130000e-72 283.0
10 TraesCS7B01G283300 chr7A 86.432 199 14 2 649 835 556297010 556297207 6.960000e-49 206.0
11 TraesCS7B01G283300 chr6D 80.030 656 113 15 2 647 59408215 59408862 2.240000e-128 470.0
12 TraesCS7B01G283300 chr6D 87.679 349 37 5 1 345 418664825 418665171 8.280000e-108 401.0
13 TraesCS7B01G283300 chr3D 89.112 349 32 5 1 345 352978911 352979257 3.800000e-116 429.0
14 TraesCS7B01G283300 chr3D 87.572 346 41 2 1 345 456904576 456904232 2.980000e-107 399.0
15 TraesCS7B01G283300 chr3D 87.708 301 33 4 347 646 254927099 254927396 1.090000e-91 348.0
16 TraesCS7B01G283300 chr3D 87.129 303 37 2 347 648 365560069 365559768 5.090000e-90 342.0
17 TraesCS7B01G283300 chr3D 91.860 172 11 3 4421 4591 42474336 42474167 2.470000e-58 237.0
18 TraesCS7B01G283300 chr3D 91.379 174 12 3 4416 4588 612710152 612709981 8.880000e-58 235.0
19 TraesCS7B01G283300 chr3D 93.814 97 4 2 4877 4972 329496865 329496960 1.540000e-30 145.0
20 TraesCS7B01G283300 chr2B 88.286 350 36 3 1 345 359532778 359532429 1.060000e-111 414.0
21 TraesCS7B01G283300 chr2B 88.095 294 31 4 354 646 168959609 168959319 3.930000e-91 346.0
22 TraesCS7B01G283300 chr2B 81.081 111 19 2 3335 3444 614397273 614397164 2.630000e-13 87.9
23 TraesCS7B01G283300 chr4B 87.931 348 37 5 1 345 515558264 515558609 6.400000e-109 405.0
24 TraesCS7B01G283300 chr4B 94.624 93 4 1 4870 4961 26837436 26837344 5.540000e-30 143.0
25 TraesCS7B01G283300 chr4B 76.712 219 45 5 3230 3445 74442723 74442938 3.360000e-22 117.0
26 TraesCS7B01G283300 chr5B 87.679 349 36 6 1 345 91420626 91420971 2.980000e-107 399.0
27 TraesCS7B01G283300 chr5D 86.817 311 36 5 343 651 557841029 557840722 5.090000e-90 342.0
28 TraesCS7B01G283300 chr5D 86.842 304 38 2 347 649 499933583 499933281 6.580000e-89 339.0
29 TraesCS7B01G283300 chr5D 89.944 179 17 1 4425 4602 498492514 498492336 4.130000e-56 230.0
30 TraesCS7B01G283300 chr5D 89.560 182 16 3 4410 4590 74461746 74461925 1.490000e-55 228.0
31 TraesCS7B01G283300 chr5D 84.071 226 24 9 3225 3444 369296897 369297116 1.940000e-49 207.0
32 TraesCS7B01G283300 chr5D 92.188 64 5 0 1414 1477 30955939 30955876 2.030000e-14 91.6
33 TraesCS7B01G283300 chr5D 73.543 223 45 13 3230 3445 473116221 473116006 7.370000e-09 73.1
34 TraesCS7B01G283300 chr2D 86.688 308 35 6 343 647 641953846 641954150 2.370000e-88 337.0
35 TraesCS7B01G283300 chr2D 81.347 386 59 10 268 646 499973848 499974227 8.630000e-78 302.0
36 TraesCS7B01G283300 chr2D 92.169 166 12 1 4423 4587 347359132 347358967 3.190000e-57 233.0
37 TraesCS7B01G283300 chr2D 89.444 180 17 2 4422 4600 475083491 475083669 5.350000e-55 226.0
38 TraesCS7B01G283300 chr2D 78.281 221 38 8 3230 3445 507750963 507751178 3.330000e-27 134.0
39 TraesCS7B01G283300 chr2D 80.702 114 20 2 3332 3444 521412461 521412573 2.630000e-13 87.9
40 TraesCS7B01G283300 chr1A 92.442 172 12 1 4424 4594 436479619 436479790 1.480000e-60 244.0
41 TraesCS7B01G283300 chr6B 91.228 171 13 2 4417 4586 144269491 144269660 1.150000e-56 231.0
42 TraesCS7B01G283300 chr5A 74.916 598 102 41 3225 3796 471694058 471694633 4.130000e-56 230.0
43 TraesCS7B01G283300 chr5A 91.111 45 2 2 4962 5005 448610633 448610676 5.740000e-05 60.2
44 TraesCS7B01G283300 chr4A 95.652 92 4 0 4870 4961 211051212 211051121 1.190000e-31 148.0
45 TraesCS7B01G283300 chr4A 95.699 93 3 1 4870 4961 617962579 617962671 1.190000e-31 148.0
46 TraesCS7B01G283300 chr4A 76.166 193 42 3 3230 3420 546297352 546297162 1.220000e-16 99.0
47 TraesCS7B01G283300 chr3A 95.699 93 3 1 4870 4961 113364146 113364054 1.190000e-31 148.0
48 TraesCS7B01G283300 chr3A 95.699 93 3 1 4870 4961 714035519 714035427 1.190000e-31 148.0
49 TraesCS7B01G283300 chr3A 94.624 93 4 1 4873 4964 480969576 480969484 5.540000e-30 143.0
50 TraesCS7B01G283300 chr1B 95.699 93 3 1 4870 4961 57536850 57536942 1.190000e-31 148.0
51 TraesCS7B01G283300 chr6A 94.624 93 4 1 4870 4961 588944669 588944577 5.540000e-30 143.0
52 TraesCS7B01G283300 chr2A 78.281 221 38 8 3230 3445 652289920 652290135 3.330000e-27 134.0
53 TraesCS7B01G283300 chr4D 76.712 219 45 6 3230 3445 50642784 50642999 3.360000e-22 117.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G283300 chr7B 517390907 517396211 5304 False 9797.0 9797 100.0000 1 5305 1 chr7B.!!$F2 5304
1 TraesCS7B01G283300 chr7D 489112078 489115947 3869 False 2695.0 5188 93.5745 836 4464 2 chr7D.!!$F1 3628
2 TraesCS7B01G283300 chr7D 19339192 19339832 640 True 407.0 407 78.3740 2 646 1 chr7D.!!$R1 644
3 TraesCS7B01G283300 chr7A 556297010 556301400 4390 False 1162.4 2974 89.5268 649 5177 5 chr7A.!!$F1 4528
4 TraesCS7B01G283300 chr6D 59408215 59408862 647 False 470.0 470 80.0300 2 647 1 chr6D.!!$F1 645
5 TraesCS7B01G283300 chr5A 471694058 471694633 575 False 230.0 230 74.9160 3225 3796 1 chr5A.!!$F2 571

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
221 222 0.033504 TATTCCCGGCAGAATCGCTC 59.966 55.0 8.97 0.00 37.62 5.03 F
513 518 0.034670 AGGTTCAGAATCCAGCTGCC 60.035 55.0 8.66 0.05 33.45 4.85 F
889 951 0.105039 CCCTGTAACCGCTCTCCATC 59.895 60.0 0.00 0.00 0.00 3.51 F
1348 1410 0.179119 GCCGTGCACTTACGTAGGAT 60.179 55.0 16.19 0.00 42.24 3.24 F
1842 1911 0.106967 GAAGGGGATCTGCCAGAACC 60.107 60.0 12.35 12.35 36.54 3.62 F
3453 3578 0.034756 CATGACCACCGGTGAGTTCA 59.965 55.0 36.07 30.03 35.25 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1360 1422 0.660488 GCCGTGACACACATTTGACA 59.340 50.0 6.37 0.0 33.40 3.58 R
1817 1886 0.694444 GGCAGATCCCCTTCCAGGTA 60.694 60.0 0.00 0.0 31.93 3.08 R
1842 1911 0.817634 TTGAACTTGGGGTCGTGCTG 60.818 55.0 0.00 0.0 0.00 4.41 R
2964 3089 0.107945 CCAGCAGAACTAGGGCTCAC 60.108 60.0 0.00 0.0 35.27 3.51 R
3709 3847 0.400213 TCTCGTTGAACCTGCCCATT 59.600 50.0 0.00 0.0 0.00 3.16 R
5281 5672 0.251916 TGGGGTTTGAGCGATAGTGG 59.748 55.0 0.00 0.0 39.35 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 42 5.755409 TCAACACTAATAGTCACCCACAT 57.245 39.130 0.00 0.00 0.00 3.21
43 44 5.012664 TCAACACTAATAGTCACCCACATGT 59.987 40.000 0.00 0.00 0.00 3.21
50 51 6.569127 AATAGTCACCCACATGTACCAATA 57.431 37.500 0.00 0.00 0.00 1.90
52 53 4.780815 AGTCACCCACATGTACCAATATG 58.219 43.478 0.00 0.00 0.00 1.78
61 62 6.376864 CCACATGTACCAATATGAGGTTTTGA 59.623 38.462 0.00 0.00 40.54 2.69
64 65 9.342308 ACATGTACCAATATGAGGTTTTGATAG 57.658 33.333 0.00 0.00 40.54 2.08
90 91 6.798315 AGATTGAACACAAGAGATGAACTG 57.202 37.500 0.00 0.00 0.00 3.16
101 102 3.848975 AGAGATGAACTGGGGTTTGAGAT 59.151 43.478 0.00 0.00 35.58 2.75
111 112 2.019984 GGGTTTGAGATGAGATGGTGC 58.980 52.381 0.00 0.00 0.00 5.01
114 115 2.681848 GTTTGAGATGAGATGGTGCTGG 59.318 50.000 0.00 0.00 0.00 4.85
116 117 2.750814 TGAGATGAGATGGTGCTGGTA 58.249 47.619 0.00 0.00 0.00 3.25
122 123 5.604231 AGATGAGATGGTGCTGGTAAAGATA 59.396 40.000 0.00 0.00 0.00 1.98
129 130 6.000246 TGGTGCTGGTAAAGATATTGATGA 58.000 37.500 0.00 0.00 0.00 2.92
145 146 5.658198 TTGATGAAGATTGATCCTCCCAT 57.342 39.130 0.00 0.00 0.00 4.00
150 151 4.661709 TGAAGATTGATCCTCCCATGATGA 59.338 41.667 0.00 0.00 0.00 2.92
151 152 5.133153 TGAAGATTGATCCTCCCATGATGAA 59.867 40.000 0.00 0.00 0.00 2.57
154 155 3.870538 TGATCCTCCCATGATGAAAGG 57.129 47.619 0.00 6.70 0.00 3.11
174 175 1.468520 GGTTGTTGGTGATGACGATGG 59.531 52.381 0.00 0.00 0.00 3.51
176 177 0.324614 TGTTGGTGATGACGATGGCT 59.675 50.000 0.00 0.00 0.00 4.75
177 178 1.271325 TGTTGGTGATGACGATGGCTT 60.271 47.619 0.00 0.00 0.00 4.35
186 187 1.737236 TGACGATGGCTTTGATTTCCG 59.263 47.619 0.00 0.00 0.00 4.30
192 193 1.667154 GGCTTTGATTTCCGCCTCCC 61.667 60.000 0.00 0.00 39.42 4.30
221 222 0.033504 TATTCCCGGCAGAATCGCTC 59.966 55.000 8.97 0.00 37.62 5.03
223 224 3.854669 CCCGGCAGAATCGCTCCT 61.855 66.667 0.00 0.00 0.00 3.69
228 230 1.141881 GCAGAATCGCTCCTCGGAA 59.858 57.895 0.00 0.00 39.05 4.30
236 238 0.591170 CGCTCCTCGGAAAGCAAAAA 59.409 50.000 11.29 0.00 38.45 1.94
247 249 1.345063 AAGCAAAAATGCTCCTGCCT 58.655 45.000 3.50 0.00 45.54 4.75
250 252 2.899256 AGCAAAAATGCTCCTGCCTAAA 59.101 40.909 0.00 0.00 42.12 1.85
253 255 4.696877 GCAAAAATGCTCCTGCCTAAATTT 59.303 37.500 0.00 0.00 38.71 1.82
262 264 2.213499 CTGCCTAAATTTCGCCTCGAT 58.787 47.619 0.00 0.00 35.23 3.59
264 266 3.997021 CTGCCTAAATTTCGCCTCGATAT 59.003 43.478 0.00 0.00 35.23 1.63
276 278 2.130073 CTCGATATGGCGACGCTCCA 62.130 60.000 20.77 10.66 36.17 3.86
293 295 3.967987 GCTCCATCCCTAAAGTCCTCTTA 59.032 47.826 0.00 0.00 33.09 2.10
296 298 6.409810 GCTCCATCCCTAAAGTCCTCTTATTT 60.410 42.308 0.00 0.00 33.09 1.40
299 301 8.053355 TCCATCCCTAAAGTCCTCTTATTTTTC 58.947 37.037 0.00 0.00 33.09 2.29
312 317 8.557450 TCCTCTTATTTTTCTACTAGGGCAAAT 58.443 33.333 0.00 0.00 0.00 2.32
313 318 8.624776 CCTCTTATTTTTCTACTAGGGCAAATG 58.375 37.037 0.00 0.00 0.00 2.32
314 319 9.396022 CTCTTATTTTTCTACTAGGGCAAATGA 57.604 33.333 0.00 0.00 0.00 2.57
398 403 2.532250 CCCCCTCTGGCACTTATTTT 57.468 50.000 0.00 0.00 0.00 1.82
399 404 2.379005 CCCCCTCTGGCACTTATTTTC 58.621 52.381 0.00 0.00 0.00 2.29
400 405 2.024941 CCCCCTCTGGCACTTATTTTCT 60.025 50.000 0.00 0.00 0.00 2.52
401 406 3.282885 CCCCTCTGGCACTTATTTTCTC 58.717 50.000 0.00 0.00 0.00 2.87
402 407 3.054065 CCCCTCTGGCACTTATTTTCTCT 60.054 47.826 0.00 0.00 0.00 3.10
403 408 4.164221 CCCCTCTGGCACTTATTTTCTCTA 59.836 45.833 0.00 0.00 0.00 2.43
404 409 5.339200 CCCCTCTGGCACTTATTTTCTCTAA 60.339 44.000 0.00 0.00 0.00 2.10
405 410 6.360618 CCCTCTGGCACTTATTTTCTCTAAT 58.639 40.000 0.00 0.00 0.00 1.73
406 411 7.420214 CCCCTCTGGCACTTATTTTCTCTAATA 60.420 40.741 0.00 0.00 0.00 0.98
407 412 7.993183 CCCTCTGGCACTTATTTTCTCTAATAA 59.007 37.037 0.00 0.00 0.00 1.40
408 413 9.566432 CCTCTGGCACTTATTTTCTCTAATAAT 57.434 33.333 0.00 0.00 31.53 1.28
451 456 5.947228 AATCTTCGTCAAATTTCAGCTCA 57.053 34.783 0.00 0.00 0.00 4.26
452 457 6.506500 AATCTTCGTCAAATTTCAGCTCAT 57.493 33.333 0.00 0.00 0.00 2.90
453 458 5.947228 TCTTCGTCAAATTTCAGCTCATT 57.053 34.783 0.00 0.00 0.00 2.57
454 459 6.317789 TCTTCGTCAAATTTCAGCTCATTT 57.682 33.333 0.00 0.00 0.00 2.32
455 460 6.144854 TCTTCGTCAAATTTCAGCTCATTTG 58.855 36.000 13.16 13.16 40.39 2.32
456 461 5.687770 TCGTCAAATTTCAGCTCATTTGA 57.312 34.783 16.24 16.24 43.80 2.69
457 462 6.070897 TCGTCAAATTTCAGCTCATTTGAA 57.929 33.333 19.68 4.45 46.15 2.69
458 463 6.144854 TCGTCAAATTTCAGCTCATTTGAAG 58.855 36.000 19.68 20.29 46.15 3.02
459 464 6.017192 TCGTCAAATTTCAGCTCATTTGAAGA 60.017 34.615 23.18 23.18 46.15 2.87
460 465 6.805271 CGTCAAATTTCAGCTCATTTGAAGAT 59.195 34.615 21.59 4.62 46.15 2.40
461 466 7.201325 CGTCAAATTTCAGCTCATTTGAAGATG 60.201 37.037 21.59 12.33 46.15 2.90
462 467 7.597743 GTCAAATTTCAGCTCATTTGAAGATGT 59.402 33.333 19.68 0.00 46.15 3.06
463 468 7.597369 TCAAATTTCAGCTCATTTGAAGATGTG 59.403 33.333 17.26 6.99 43.32 3.21
464 469 4.430137 TTCAGCTCATTTGAAGATGTGC 57.570 40.909 4.31 4.31 43.34 4.57
465 470 3.414269 TCAGCTCATTTGAAGATGTGCA 58.586 40.909 12.55 0.00 44.65 4.57
466 471 3.439129 TCAGCTCATTTGAAGATGTGCAG 59.561 43.478 12.55 6.40 44.65 4.41
467 472 3.439129 CAGCTCATTTGAAGATGTGCAGA 59.561 43.478 12.55 0.00 44.65 4.26
468 473 4.077108 AGCTCATTTGAAGATGTGCAGAA 58.923 39.130 12.55 0.00 44.65 3.02
469 474 4.705507 AGCTCATTTGAAGATGTGCAGAAT 59.294 37.500 12.55 0.00 44.65 2.40
470 475 5.884232 AGCTCATTTGAAGATGTGCAGAATA 59.116 36.000 12.55 0.00 44.65 1.75
471 476 6.376299 AGCTCATTTGAAGATGTGCAGAATAA 59.624 34.615 12.55 0.00 44.65 1.40
472 477 6.691818 GCTCATTTGAAGATGTGCAGAATAAG 59.308 38.462 6.94 0.00 42.83 1.73
473 478 7.627939 GCTCATTTGAAGATGTGCAGAATAAGT 60.628 37.037 6.94 0.00 42.83 2.24
474 479 8.791327 TCATTTGAAGATGTGCAGAATAAGTA 57.209 30.769 0.00 0.00 0.00 2.24
475 480 9.399797 TCATTTGAAGATGTGCAGAATAAGTAT 57.600 29.630 0.00 0.00 0.00 2.12
476 481 9.661187 CATTTGAAGATGTGCAGAATAAGTATC 57.339 33.333 0.00 0.00 0.00 2.24
477 482 9.624373 ATTTGAAGATGTGCAGAATAAGTATCT 57.376 29.630 0.00 0.00 0.00 1.98
478 483 8.654230 TTGAAGATGTGCAGAATAAGTATCTC 57.346 34.615 0.00 0.00 0.00 2.75
479 484 8.016301 TGAAGATGTGCAGAATAAGTATCTCT 57.984 34.615 0.00 0.00 0.00 3.10
480 485 7.924947 TGAAGATGTGCAGAATAAGTATCTCTG 59.075 37.037 0.00 0.00 39.69 3.35
481 486 7.594351 AGATGTGCAGAATAAGTATCTCTGA 57.406 36.000 2.57 0.00 39.15 3.27
482 487 7.432869 AGATGTGCAGAATAAGTATCTCTGAC 58.567 38.462 2.57 0.00 39.15 3.51
483 488 5.582550 TGTGCAGAATAAGTATCTCTGACG 58.417 41.667 2.57 0.00 39.15 4.35
484 489 5.125578 TGTGCAGAATAAGTATCTCTGACGT 59.874 40.000 2.57 0.00 39.15 4.34
485 490 6.317893 TGTGCAGAATAAGTATCTCTGACGTA 59.682 38.462 2.57 0.00 39.15 3.57
486 491 6.853872 GTGCAGAATAAGTATCTCTGACGTAG 59.146 42.308 2.57 0.00 39.15 3.51
487 492 5.854338 GCAGAATAAGTATCTCTGACGTAGC 59.146 44.000 2.57 0.00 39.15 3.58
488 493 6.293735 GCAGAATAAGTATCTCTGACGTAGCT 60.294 42.308 2.57 0.00 39.15 3.32
489 494 7.644490 CAGAATAAGTATCTCTGACGTAGCTT 58.356 38.462 0.00 0.00 39.15 3.74
490 495 8.132362 CAGAATAAGTATCTCTGACGTAGCTTT 58.868 37.037 0.00 0.00 39.15 3.51
491 496 8.688151 AGAATAAGTATCTCTGACGTAGCTTTT 58.312 33.333 0.00 0.00 0.00 2.27
492 497 9.303537 GAATAAGTATCTCTGACGTAGCTTTTT 57.696 33.333 0.00 0.00 0.00 1.94
493 498 6.952935 AAGTATCTCTGACGTAGCTTTTTG 57.047 37.500 0.00 0.00 0.00 2.44
494 499 6.268825 AGTATCTCTGACGTAGCTTTTTGA 57.731 37.500 0.00 0.00 0.00 2.69
495 500 6.326375 AGTATCTCTGACGTAGCTTTTTGAG 58.674 40.000 0.00 0.00 0.00 3.02
496 501 3.914312 TCTCTGACGTAGCTTTTTGAGG 58.086 45.455 0.00 0.00 0.00 3.86
497 502 3.321111 TCTCTGACGTAGCTTTTTGAGGT 59.679 43.478 0.00 0.00 39.87 3.85
498 503 4.058817 CTCTGACGTAGCTTTTTGAGGTT 58.941 43.478 0.00 0.00 37.30 3.50
499 504 4.056050 TCTGACGTAGCTTTTTGAGGTTC 58.944 43.478 0.00 0.00 37.30 3.62
500 505 3.799366 TGACGTAGCTTTTTGAGGTTCA 58.201 40.909 0.00 0.00 37.30 3.18
501 506 3.807622 TGACGTAGCTTTTTGAGGTTCAG 59.192 43.478 0.00 0.00 37.30 3.02
502 507 4.056050 GACGTAGCTTTTTGAGGTTCAGA 58.944 43.478 0.00 0.00 37.30 3.27
503 508 4.448210 ACGTAGCTTTTTGAGGTTCAGAA 58.552 39.130 0.00 0.00 37.30 3.02
504 509 5.063880 ACGTAGCTTTTTGAGGTTCAGAAT 58.936 37.500 0.00 0.00 37.30 2.40
505 510 5.179555 ACGTAGCTTTTTGAGGTTCAGAATC 59.820 40.000 0.00 0.00 37.30 2.52
506 511 5.390991 CGTAGCTTTTTGAGGTTCAGAATCC 60.391 44.000 0.00 0.00 37.30 3.01
507 512 4.473444 AGCTTTTTGAGGTTCAGAATCCA 58.527 39.130 0.00 0.00 30.17 3.41
508 513 4.522022 AGCTTTTTGAGGTTCAGAATCCAG 59.478 41.667 0.00 0.00 30.17 3.86
509 514 4.802999 CTTTTTGAGGTTCAGAATCCAGC 58.197 43.478 0.00 0.00 0.00 4.85
510 515 3.795688 TTTGAGGTTCAGAATCCAGCT 57.204 42.857 0.00 0.00 0.00 4.24
511 516 2.775911 TGAGGTTCAGAATCCAGCTG 57.224 50.000 6.78 6.78 34.71 4.24
512 517 1.339438 TGAGGTTCAGAATCCAGCTGC 60.339 52.381 8.66 0.00 33.45 5.25
513 518 0.034670 AGGTTCAGAATCCAGCTGCC 60.035 55.000 8.66 0.05 33.45 4.85
514 519 1.372087 GGTTCAGAATCCAGCTGCCG 61.372 60.000 8.66 0.00 33.45 5.69
515 520 1.078214 TTCAGAATCCAGCTGCCGG 60.078 57.895 8.66 0.00 33.45 6.13
516 521 3.207669 CAGAATCCAGCTGCCGGC 61.208 66.667 22.73 22.73 42.19 6.13
517 522 3.720601 AGAATCCAGCTGCCGGCA 61.721 61.111 30.59 30.59 44.79 5.69
518 523 2.751436 GAATCCAGCTGCCGGCAA 60.751 61.111 32.09 16.35 44.79 4.52
519 524 2.043652 AATCCAGCTGCCGGCAAT 60.044 55.556 32.09 19.63 44.79 3.56
520 525 2.068277 GAATCCAGCTGCCGGCAATC 62.068 60.000 32.09 24.06 44.79 2.67
521 526 2.563013 AATCCAGCTGCCGGCAATCT 62.563 55.000 32.09 25.93 44.79 2.40
522 527 2.955022 ATCCAGCTGCCGGCAATCTC 62.955 60.000 32.09 18.88 44.79 2.75
523 528 3.207669 CAGCTGCCGGCAATCTCC 61.208 66.667 32.09 15.73 44.79 3.71
524 529 4.496336 AGCTGCCGGCAATCTCCC 62.496 66.667 32.09 13.93 44.79 4.30
525 530 4.496336 GCTGCCGGCAATCTCCCT 62.496 66.667 32.09 0.00 41.35 4.20
526 531 2.203126 CTGCCGGCAATCTCCCTC 60.203 66.667 32.09 0.00 0.00 4.30
527 532 2.688666 TGCCGGCAATCTCCCTCT 60.689 61.111 30.74 0.00 0.00 3.69
528 533 2.262774 CTGCCGGCAATCTCCCTCTT 62.263 60.000 32.09 0.00 0.00 2.85
529 534 1.524849 GCCGGCAATCTCCCTCTTC 60.525 63.158 24.80 0.00 0.00 2.87
530 535 1.907739 CCGGCAATCTCCCTCTTCA 59.092 57.895 0.00 0.00 0.00 3.02
531 536 0.471617 CCGGCAATCTCCCTCTTCAT 59.528 55.000 0.00 0.00 0.00 2.57
532 537 1.694150 CCGGCAATCTCCCTCTTCATA 59.306 52.381 0.00 0.00 0.00 2.15
533 538 2.304180 CCGGCAATCTCCCTCTTCATAT 59.696 50.000 0.00 0.00 0.00 1.78
534 539 3.515502 CCGGCAATCTCCCTCTTCATATA 59.484 47.826 0.00 0.00 0.00 0.86
535 540 4.020218 CCGGCAATCTCCCTCTTCATATAA 60.020 45.833 0.00 0.00 0.00 0.98
536 541 5.513094 CCGGCAATCTCCCTCTTCATATAAA 60.513 44.000 0.00 0.00 0.00 1.40
537 542 6.176183 CGGCAATCTCCCTCTTCATATAAAT 58.824 40.000 0.00 0.00 0.00 1.40
538 543 6.656693 CGGCAATCTCCCTCTTCATATAAATT 59.343 38.462 0.00 0.00 0.00 1.82
539 544 7.175641 CGGCAATCTCCCTCTTCATATAAATTT 59.824 37.037 0.00 0.00 0.00 1.82
540 545 8.864087 GGCAATCTCCCTCTTCATATAAATTTT 58.136 33.333 0.00 0.00 0.00 1.82
541 546 9.688592 GCAATCTCCCTCTTCATATAAATTTTG 57.311 33.333 0.00 0.00 0.00 2.44
637 642 8.950210 ACAGTAGAAACAGATGATACAAAATGG 58.050 33.333 0.00 0.00 0.00 3.16
638 643 9.166173 CAGTAGAAACAGATGATACAAAATGGA 57.834 33.333 0.00 0.00 0.00 3.41
639 644 9.167311 AGTAGAAACAGATGATACAAAATGGAC 57.833 33.333 0.00 0.00 0.00 4.02
640 645 7.076842 AGAAACAGATGATACAAAATGGACG 57.923 36.000 0.00 0.00 0.00 4.79
641 646 6.655003 AGAAACAGATGATACAAAATGGACGT 59.345 34.615 0.00 0.00 0.00 4.34
642 647 7.822334 AGAAACAGATGATACAAAATGGACGTA 59.178 33.333 0.00 0.00 0.00 3.57
643 648 8.506168 AAACAGATGATACAAAATGGACGTAT 57.494 30.769 0.00 0.00 0.00 3.06
644 649 7.715265 ACAGATGATACAAAATGGACGTATC 57.285 36.000 0.00 0.00 41.14 2.24
647 652 5.959652 TGATACAAAATGGACGTATCACG 57.040 39.130 7.25 0.00 43.95 4.35
675 680 6.543100 TCGGTTAACTGGTTTGTATTGTTCTT 59.457 34.615 14.44 0.00 0.00 2.52
678 683 9.454585 GGTTAACTGGTTTGTATTGTTCTTTAC 57.545 33.333 5.42 0.00 0.00 2.01
683 688 8.188139 ACTGGTTTGTATTGTTCTTTACTGTTG 58.812 33.333 0.00 0.00 0.00 3.33
785 802 8.798153 GGATTGTAATCTTTGATTTTTACGCAG 58.202 33.333 4.75 0.00 35.73 5.18
786 803 9.341899 GATTGTAATCTTTGATTTTTACGCAGT 57.658 29.630 0.00 0.00 37.17 4.40
810 827 2.303600 AGGAGTATGTTTTACCACGCCA 59.696 45.455 0.00 0.00 33.77 5.69
815 832 6.091718 AGTATGTTTTACCACGCCAAAAAT 57.908 33.333 0.00 0.00 0.00 1.82
818 835 8.142551 AGTATGTTTTACCACGCCAAAAATAAA 58.857 29.630 0.00 0.00 0.00 1.40
821 838 6.258068 TGTTTTACCACGCCAAAAATAAAAGG 59.742 34.615 0.00 0.00 0.00 3.11
882 944 1.078710 AGTCTCCCCTGTAACCGCT 59.921 57.895 0.00 0.00 0.00 5.52
889 951 0.105039 CCCTGTAACCGCTCTCCATC 59.895 60.000 0.00 0.00 0.00 3.51
890 952 1.115467 CCTGTAACCGCTCTCCATCT 58.885 55.000 0.00 0.00 0.00 2.90
934 996 1.418342 GCGAATTACGAGCGGCAAGA 61.418 55.000 1.45 0.00 45.77 3.02
946 1008 1.873903 GCGGCAAGAAAGACAGAGTCA 60.874 52.381 0.00 0.00 34.60 3.41
950 1012 3.307339 GGCAAGAAAGACAGAGTCATCCT 60.307 47.826 0.00 0.00 34.60 3.24
1033 1095 1.810532 GATCGAGCTTCCTGTCCGT 59.189 57.895 0.00 0.00 0.00 4.69
1034 1096 0.526524 GATCGAGCTTCCTGTCCGTG 60.527 60.000 0.00 0.00 0.00 4.94
1035 1097 1.949847 ATCGAGCTTCCTGTCCGTGG 61.950 60.000 0.00 0.00 0.00 4.94
1036 1098 2.266055 GAGCTTCCTGTCCGTGGG 59.734 66.667 0.00 0.00 0.00 4.61
1066 1128 3.450115 GCCCCTCTCGTACGTGCT 61.450 66.667 16.05 0.00 0.00 4.40
1328 1390 4.899687 CACTCCATGCATGCGCGC 62.900 66.667 27.26 27.26 42.97 6.86
1344 1406 2.806198 GCGCCGTGCACTTACGTA 60.806 61.111 16.19 0.00 45.45 3.57
1345 1407 2.785105 GCGCCGTGCACTTACGTAG 61.785 63.158 16.19 0.00 45.45 3.51
1346 1408 2.156446 CGCCGTGCACTTACGTAGG 61.156 63.158 16.19 7.81 42.24 3.18
1347 1409 1.213537 GCCGTGCACTTACGTAGGA 59.786 57.895 16.19 0.00 42.24 2.94
1348 1410 0.179119 GCCGTGCACTTACGTAGGAT 60.179 55.000 16.19 0.00 42.24 3.24
1349 1411 1.556564 CCGTGCACTTACGTAGGATG 58.443 55.000 16.19 7.22 42.24 3.51
1350 1412 1.133598 CCGTGCACTTACGTAGGATGA 59.866 52.381 16.19 0.00 42.24 2.92
1351 1413 2.416296 CCGTGCACTTACGTAGGATGAA 60.416 50.000 16.19 0.00 42.24 2.57
1352 1414 3.247442 CGTGCACTTACGTAGGATGAAA 58.753 45.455 16.19 0.00 39.13 2.69
1353 1415 3.863424 CGTGCACTTACGTAGGATGAAAT 59.137 43.478 16.19 0.00 39.13 2.17
1354 1416 4.259810 CGTGCACTTACGTAGGATGAAATG 60.260 45.833 16.19 0.00 39.13 2.32
1355 1417 3.621268 TGCACTTACGTAGGATGAAATGC 59.379 43.478 12.14 9.86 33.28 3.56
1356 1418 3.621268 GCACTTACGTAGGATGAAATGCA 59.379 43.478 12.14 0.00 36.98 3.96
1357 1419 4.094294 GCACTTACGTAGGATGAAATGCAA 59.906 41.667 12.14 0.00 36.98 4.08
1358 1420 5.220854 GCACTTACGTAGGATGAAATGCAAT 60.221 40.000 12.14 0.00 36.98 3.56
1359 1421 6.677920 GCACTTACGTAGGATGAAATGCAATT 60.678 38.462 12.14 0.00 36.98 2.32
1376 1438 4.565962 TGCAATTTGTCAAATGTGTGTCAC 59.434 37.500 11.54 0.00 34.56 3.67
1392 1454 1.064134 CACGGCTGATCGATCGACA 59.936 57.895 22.06 18.29 0.00 4.35
1510 1576 2.584418 CGATCGCCAGTGAGCCAG 60.584 66.667 0.26 0.00 0.00 4.85
1601 1669 1.645034 ATCGATGTGTTTCAGAGCGG 58.355 50.000 0.00 0.00 0.00 5.52
1691 1759 4.436998 CTCGAGAAGGCCGGCGTT 62.437 66.667 32.86 32.86 0.00 4.84
1797 1866 2.357034 TGAGCTTCAACGACGGCC 60.357 61.111 0.00 0.00 0.00 6.13
1842 1911 0.106967 GAAGGGGATCTGCCAGAACC 60.107 60.000 12.35 12.35 36.54 3.62
1886 1967 0.321919 ACAGGTACGTAGCCTCGTCA 60.322 55.000 20.54 0.00 43.12 4.35
2085 2172 4.785453 GGCGGCTCCCAGGTCAAG 62.785 72.222 0.00 0.00 0.00 3.02
2196 2283 1.368493 CGTGAACGACGTCGAGTGT 60.368 57.895 41.52 23.54 43.50 3.55
2343 2430 3.650950 ACCAAGGCCGGCATCACT 61.651 61.111 30.85 13.59 0.00 3.41
2458 2545 4.480480 CCTTCCCTGGCTACCTCA 57.520 61.111 0.00 0.00 0.00 3.86
2500 2587 3.071206 GGCAGAGCCTGTCGGAGA 61.071 66.667 0.00 0.00 46.69 3.71
2518 2605 4.814294 CGTCGCTCCGGGGGAAAG 62.814 72.222 1.90 0.00 38.62 2.62
2529 2616 0.919780 GGGGGAAAGGCTTCTACCCT 60.920 60.000 25.30 2.37 41.58 4.34
2530 2617 1.000496 GGGGAAAGGCTTCTACCCTT 59.000 55.000 25.30 1.71 44.35 3.95
2952 3077 7.771927 ATGTCAAATCAAATCAAGAACCTCT 57.228 32.000 0.00 0.00 0.00 3.69
2962 3087 9.567776 TCAAATCAAGAACCTCTGTAACAATAA 57.432 29.630 0.00 0.00 0.00 1.40
2970 3095 5.186198 ACCTCTGTAACAATAATGTGAGCC 58.814 41.667 0.00 0.00 40.46 4.70
2971 3096 4.576463 CCTCTGTAACAATAATGTGAGCCC 59.424 45.833 0.00 0.00 40.46 5.19
2973 3098 6.408092 CCTCTGTAACAATAATGTGAGCCCTA 60.408 42.308 0.00 0.00 40.46 3.53
2993 3118 1.002544 AGTTCTGCTGGGTTACTGAGC 59.997 52.381 0.00 0.00 0.00 4.26
3033 3158 0.614979 CAAGGTCTCCTCCTTCCGGA 60.615 60.000 0.00 0.00 44.87 5.14
3151 3276 1.422531 AAAGGTGGCCTGATTTTGCA 58.577 45.000 3.32 0.00 32.13 4.08
3168 3293 6.616774 TTTTGCATATCGATCATAAGCACA 57.383 33.333 0.00 0.00 40.56 4.57
3170 3295 3.681417 TGCATATCGATCATAAGCACAGC 59.319 43.478 0.00 0.00 36.88 4.40
3174 3299 1.756538 TCGATCATAAGCACAGCCTCA 59.243 47.619 0.00 0.00 0.00 3.86
3194 3319 6.753744 GCCTCATTTCATTTTGTATCCAAGTC 59.246 38.462 0.00 0.00 0.00 3.01
3196 3321 8.306038 CCTCATTTCATTTTGTATCCAAGTCAA 58.694 33.333 0.00 0.00 0.00 3.18
3218 3343 7.701924 GTCAACAACTTGATGTGAATTCTTTCA 59.298 33.333 7.05 4.45 38.69 2.69
3453 3578 0.034756 CATGACCACCGGTGAGTTCA 59.965 55.000 36.07 30.03 35.25 3.18
3468 3593 2.210116 AGTTCAAACGTCGCATCAACT 58.790 42.857 0.00 0.00 0.00 3.16
3542 3680 4.436998 CAGCGACGGACCTGGACC 62.437 72.222 0.00 2.00 0.00 4.46
3598 3736 2.107141 GCGACGCCCTTCAGCTAT 59.893 61.111 9.14 0.00 0.00 2.97
3709 3847 2.029369 GGGTACAACGTGACGGCA 59.971 61.111 10.66 0.00 0.00 5.69
3889 4027 2.687805 CGTCGTCAGAGAGCCGGAA 61.688 63.158 5.05 0.00 0.00 4.30
4078 4216 3.386237 GTGCGGACTCCTCTGGCT 61.386 66.667 0.00 0.00 0.00 4.75
4110 4252 2.435805 GCAAGATGTAGTGGGATCAGGA 59.564 50.000 0.00 0.00 0.00 3.86
4120 4262 4.837218 AGTGGGATCAGGATTAGGAGATT 58.163 43.478 0.00 0.00 0.00 2.40
4154 4296 3.942748 TGTTTGGGATTGATTACGTAGGC 59.057 43.478 0.00 0.00 0.00 3.93
4158 4300 4.448210 TGGGATTGATTACGTAGGCTTTC 58.552 43.478 0.00 0.00 0.00 2.62
4173 4315 1.474077 GCTTTCATTAGGCAGTGGTGG 59.526 52.381 0.00 0.00 0.00 4.61
4197 4342 4.799678 CACGTAGCGAGAGGATGAATTAT 58.200 43.478 0.00 0.00 0.00 1.28
4285 4435 4.065321 ACGAGATGATGGGAAATGAGAC 57.935 45.455 0.00 0.00 0.00 3.36
4286 4436 3.708631 ACGAGATGATGGGAAATGAGACT 59.291 43.478 0.00 0.00 0.00 3.24
4287 4437 4.202202 ACGAGATGATGGGAAATGAGACTC 60.202 45.833 0.00 0.00 0.00 3.36
4294 4623 9.213799 GATGATGGGAAATGAGACTCTTATTAC 57.786 37.037 3.68 0.00 0.00 1.89
4297 4626 9.267084 GATGGGAAATGAGACTCTTATTACTTC 57.733 37.037 3.68 0.00 0.00 3.01
4302 4631 9.862371 GAAATGAGACTCTTATTACTTCTGTGA 57.138 33.333 3.68 0.00 0.00 3.58
4437 4802 2.720915 ACAGTACTACTCCCTCCGTTC 58.279 52.381 0.00 0.00 0.00 3.95
4446 4811 6.856757 ACTACTCCCTCCGTTCCTAAATATA 58.143 40.000 0.00 0.00 0.00 0.86
4453 4818 7.015001 TCCCTCCGTTCCTAAATATAAGTCTTC 59.985 40.741 0.00 0.00 0.00 2.87
4454 4819 6.862090 CCTCCGTTCCTAAATATAAGTCTTCG 59.138 42.308 0.00 0.00 0.00 3.79
4474 4839 9.803130 GTCTTCGTAAAGATTTTACTGTAAACC 57.197 33.333 12.27 7.85 43.26 3.27
4475 4840 9.545105 TCTTCGTAAAGATTTTACTGTAAACCA 57.455 29.630 12.27 0.13 36.59 3.67
4476 4841 9.590088 CTTCGTAAAGATTTTACTGTAAACCAC 57.410 33.333 12.27 7.29 34.14 4.16
4477 4842 8.659925 TCGTAAAGATTTTACTGTAAACCACA 57.340 30.769 12.27 0.00 35.30 4.17
4478 4843 9.275398 TCGTAAAGATTTTACTGTAAACCACAT 57.725 29.630 12.27 4.00 36.29 3.21
4482 4847 7.605410 AGATTTTACTGTAAACCACATACGG 57.395 36.000 12.27 0.00 36.29 4.02
4483 4848 7.388437 AGATTTTACTGTAAACCACATACGGA 58.612 34.615 12.27 0.00 36.29 4.69
4484 4849 8.044908 AGATTTTACTGTAAACCACATACGGAT 58.955 33.333 12.27 0.32 36.29 4.18
4485 4850 6.971527 TTTACTGTAAACCACATACGGATG 57.028 37.500 5.94 5.94 36.29 3.51
4487 4852 5.664294 ACTGTAAACCACATACGGATGTA 57.336 39.130 14.23 0.00 44.82 2.29
4488 4853 6.229936 ACTGTAAACCACATACGGATGTAT 57.770 37.500 14.23 1.38 44.82 2.29
4489 4854 7.350744 ACTGTAAACCACATACGGATGTATA 57.649 36.000 14.23 1.93 44.82 1.47
4490 4855 7.959175 ACTGTAAACCACATACGGATGTATAT 58.041 34.615 14.23 2.92 44.82 0.86
4491 4856 9.081204 ACTGTAAACCACATACGGATGTATATA 57.919 33.333 14.23 1.92 44.82 0.86
4492 4857 9.569167 CTGTAAACCACATACGGATGTATATAG 57.431 37.037 14.23 8.35 44.82 1.31
4493 4858 9.299465 TGTAAACCACATACGGATGTATATAGA 57.701 33.333 14.23 0.69 44.82 1.98
4496 4861 6.806751 ACCACATACGGATGTATATAGATGC 58.193 40.000 14.23 0.00 44.82 3.91
4497 4862 6.379988 ACCACATACGGATGTATATAGATGCA 59.620 38.462 14.23 0.00 44.82 3.96
4498 4863 7.069950 ACCACATACGGATGTATATAGATGCAT 59.930 37.037 14.23 0.00 44.82 3.96
4499 4864 7.928167 CCACATACGGATGTATATAGATGCATT 59.072 37.037 14.23 1.23 44.82 3.56
4500 4865 9.317936 CACATACGGATGTATATAGATGCATTT 57.682 33.333 14.23 0.00 44.82 2.32
4501 4866 9.890629 ACATACGGATGTATATAGATGCATTTT 57.109 29.630 12.79 0.00 44.77 1.82
4505 4870 9.944376 ACGGATGTATATAGATGCATTTTAAGT 57.056 29.630 11.19 0.00 38.38 2.24
4528 4893 8.561738 AGTGTAGATTTATCATTTTGTTCCGT 57.438 30.769 0.00 0.00 0.00 4.69
4529 4894 9.661563 AGTGTAGATTTATCATTTTGTTCCGTA 57.338 29.630 0.00 0.00 0.00 4.02
4538 4903 7.915293 ATCATTTTGTTCCGTATGTAGTTCA 57.085 32.000 0.00 0.00 0.00 3.18
4539 4904 7.915293 TCATTTTGTTCCGTATGTAGTTCAT 57.085 32.000 0.00 0.00 40.25 2.57
4540 4905 7.970384 TCATTTTGTTCCGTATGTAGTTCATC 58.030 34.615 0.00 0.00 37.91 2.92
4541 4906 7.822334 TCATTTTGTTCCGTATGTAGTTCATCT 59.178 33.333 0.00 0.00 37.91 2.90
4542 4907 9.093970 CATTTTGTTCCGTATGTAGTTCATCTA 57.906 33.333 0.00 0.00 37.91 1.98
4543 4908 8.697846 TTTTGTTCCGTATGTAGTTCATCTAG 57.302 34.615 0.00 0.00 37.91 2.43
4544 4909 7.400599 TTGTTCCGTATGTAGTTCATCTAGT 57.599 36.000 0.00 0.00 37.91 2.57
4545 4910 6.792326 TGTTCCGTATGTAGTTCATCTAGTG 58.208 40.000 0.00 0.00 37.91 2.74
4546 4911 6.183360 TGTTCCGTATGTAGTTCATCTAGTGG 60.183 42.308 0.00 0.00 37.91 4.00
4547 4912 5.687780 TCCGTATGTAGTTCATCTAGTGGA 58.312 41.667 0.00 0.00 37.91 4.02
4548 4913 6.124340 TCCGTATGTAGTTCATCTAGTGGAA 58.876 40.000 0.00 0.00 37.91 3.53
4549 4914 6.776116 TCCGTATGTAGTTCATCTAGTGGAAT 59.224 38.462 2.95 0.00 37.91 3.01
4550 4915 7.040617 TCCGTATGTAGTTCATCTAGTGGAATC 60.041 40.741 2.95 0.00 37.91 2.52
4551 4916 7.040340 CCGTATGTAGTTCATCTAGTGGAATCT 60.040 40.741 2.95 5.08 37.91 2.40
4552 4917 8.353684 CGTATGTAGTTCATCTAGTGGAATCTT 58.646 37.037 2.95 0.00 37.91 2.40
4556 4921 9.475620 TGTAGTTCATCTAGTGGAATCTTTAGA 57.524 33.333 2.95 0.00 0.00 2.10
4557 4922 9.959749 GTAGTTCATCTAGTGGAATCTTTAGAG 57.040 37.037 2.95 0.00 0.00 2.43
4558 4923 8.830915 AGTTCATCTAGTGGAATCTTTAGAGA 57.169 34.615 2.95 0.00 36.09 3.10
4559 4924 8.912988 AGTTCATCTAGTGGAATCTTTAGAGAG 58.087 37.037 2.95 0.00 34.85 3.20
4560 4925 8.908903 GTTCATCTAGTGGAATCTTTAGAGAGA 58.091 37.037 2.95 0.00 34.85 3.10
4561 4926 8.458573 TCATCTAGTGGAATCTTTAGAGAGAC 57.541 38.462 0.00 0.00 34.85 3.36
4562 4927 8.278639 TCATCTAGTGGAATCTTTAGAGAGACT 58.721 37.037 0.00 0.00 34.85 3.24
4563 4928 8.912988 CATCTAGTGGAATCTTTAGAGAGACTT 58.087 37.037 0.00 0.00 34.85 3.01
4578 4943 9.857656 TTAGAGAGACTTATATTTAGGAACGGA 57.142 33.333 0.00 0.00 0.00 4.69
4579 4944 8.398878 AGAGAGACTTATATTTAGGAACGGAG 57.601 38.462 0.00 0.00 0.00 4.63
4580 4945 7.449086 AGAGAGACTTATATTTAGGAACGGAGG 59.551 40.741 0.00 0.00 0.00 4.30
4581 4946 6.494146 AGAGACTTATATTTAGGAACGGAGGG 59.506 42.308 0.00 0.00 0.00 4.30
4582 4947 6.379579 AGACTTATATTTAGGAACGGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
4583 4948 6.494146 AGACTTATATTTAGGAACGGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
4596 4961 6.294620 GGAACGGAGGGAGTAGTAATTATGAG 60.295 46.154 0.00 0.00 0.00 2.90
4599 4964 6.264970 ACGGAGGGAGTAGTAATTATGAGTTC 59.735 42.308 0.00 0.00 0.00 3.01
4618 4983 5.588240 AGTTCATTGTGCAGCATAATCATG 58.412 37.500 14.09 6.07 35.07 3.07
4624 4989 5.934935 TGTGCAGCATAATCATGTCATAG 57.065 39.130 0.00 0.00 34.40 2.23
4638 5003 8.929260 ATCATGTCATAGGCATCATTTCTTTA 57.071 30.769 0.00 0.00 0.00 1.85
4641 5006 9.622004 CATGTCATAGGCATCATTTCTTTAATC 57.378 33.333 0.00 0.00 0.00 1.75
4654 5019 9.181061 TCATTTCTTTAATCTGAGAATGATGCA 57.819 29.630 0.00 0.00 32.40 3.96
4665 5030 6.153170 TCTGAGAATGATGCAAATTTAAGCCA 59.847 34.615 0.00 0.00 0.00 4.75
4666 5031 6.880484 TGAGAATGATGCAAATTTAAGCCAT 58.120 32.000 0.00 0.00 0.00 4.40
4672 5037 8.789825 ATGATGCAAATTTAAGCCATGTAAAA 57.210 26.923 0.00 0.00 0.00 1.52
4732 5118 8.834465 CCTGAACATTTATCATAACTTCCTCTG 58.166 37.037 0.00 0.00 0.00 3.35
4886 5274 8.809468 AAAATATCTTGAAAACTACTCCCTCC 57.191 34.615 0.00 0.00 0.00 4.30
4887 5275 3.955650 TCTTGAAAACTACTCCCTCCG 57.044 47.619 0.00 0.00 0.00 4.63
4888 5276 3.236896 TCTTGAAAACTACTCCCTCCGT 58.763 45.455 0.00 0.00 0.00 4.69
4889 5277 3.257624 TCTTGAAAACTACTCCCTCCGTC 59.742 47.826 0.00 0.00 0.00 4.79
4890 5278 2.885616 TGAAAACTACTCCCTCCGTCT 58.114 47.619 0.00 0.00 0.00 4.18
4891 5279 2.824341 TGAAAACTACTCCCTCCGTCTC 59.176 50.000 0.00 0.00 0.00 3.36
4892 5280 2.599408 AAACTACTCCCTCCGTCTCA 57.401 50.000 0.00 0.00 0.00 3.27
4893 5281 2.830651 AACTACTCCCTCCGTCTCAT 57.169 50.000 0.00 0.00 0.00 2.90
4894 5282 3.947612 AACTACTCCCTCCGTCTCATA 57.052 47.619 0.00 0.00 0.00 2.15
4895 5283 3.947612 ACTACTCCCTCCGTCTCATAA 57.052 47.619 0.00 0.00 0.00 1.90
4896 5284 4.456662 ACTACTCCCTCCGTCTCATAAT 57.543 45.455 0.00 0.00 0.00 1.28
4897 5285 5.579753 ACTACTCCCTCCGTCTCATAATA 57.420 43.478 0.00 0.00 0.00 0.98
4898 5286 6.142259 ACTACTCCCTCCGTCTCATAATAT 57.858 41.667 0.00 0.00 0.00 1.28
4899 5287 7.268212 ACTACTCCCTCCGTCTCATAATATA 57.732 40.000 0.00 0.00 0.00 0.86
4900 5288 7.696981 ACTACTCCCTCCGTCTCATAATATAA 58.303 38.462 0.00 0.00 0.00 0.98
4901 5289 8.168725 ACTACTCCCTCCGTCTCATAATATAAA 58.831 37.037 0.00 0.00 0.00 1.40
4902 5290 7.850935 ACTCCCTCCGTCTCATAATATAAAA 57.149 36.000 0.00 0.00 0.00 1.52
4903 5291 7.897864 ACTCCCTCCGTCTCATAATATAAAAG 58.102 38.462 0.00 0.00 0.00 2.27
4904 5292 6.698380 TCCCTCCGTCTCATAATATAAAAGC 58.302 40.000 0.00 0.00 0.00 3.51
4905 5293 6.497259 TCCCTCCGTCTCATAATATAAAAGCT 59.503 38.462 0.00 0.00 0.00 3.74
4906 5294 7.016268 TCCCTCCGTCTCATAATATAAAAGCTT 59.984 37.037 0.00 0.00 0.00 3.74
4907 5295 7.661847 CCCTCCGTCTCATAATATAAAAGCTTT 59.338 37.037 5.69 5.69 0.00 3.51
4908 5296 9.057089 CCTCCGTCTCATAATATAAAAGCTTTT 57.943 33.333 26.50 26.50 0.00 2.27
4949 5337 9.967451 TGTCAAAAACACTCTTATATTATGGGA 57.033 29.630 0.00 0.00 31.20 4.37
4951 5339 9.104965 TCAAAAACACTCTTATATTATGGGACG 57.895 33.333 0.00 0.00 0.00 4.79
4952 5340 8.342634 CAAAAACACTCTTATATTATGGGACGG 58.657 37.037 0.00 0.00 0.00 4.79
4953 5341 6.989155 AACACTCTTATATTATGGGACGGA 57.011 37.500 0.00 0.00 0.00 4.69
4954 5342 6.591750 ACACTCTTATATTATGGGACGGAG 57.408 41.667 0.00 0.00 0.00 4.63
4955 5343 5.480772 ACACTCTTATATTATGGGACGGAGG 59.519 44.000 0.00 0.00 0.00 4.30
4956 5344 5.024118 ACTCTTATATTATGGGACGGAGGG 58.976 45.833 0.00 0.00 0.00 4.30
4957 5345 5.222484 ACTCTTATATTATGGGACGGAGGGA 60.222 44.000 0.00 0.00 0.00 4.20
4958 5346 5.269991 TCTTATATTATGGGACGGAGGGAG 58.730 45.833 0.00 0.00 0.00 4.30
4959 5347 3.562108 ATATTATGGGACGGAGGGAGT 57.438 47.619 0.00 0.00 0.00 3.85
4960 5348 4.687262 ATATTATGGGACGGAGGGAGTA 57.313 45.455 0.00 0.00 0.00 2.59
4964 5352 0.257039 TGGGACGGAGGGAGTAGTAC 59.743 60.000 0.00 0.00 0.00 2.73
4968 5356 2.224499 GGACGGAGGGAGTAGTACCTAG 60.224 59.091 0.00 1.61 37.18 3.02
4973 5361 3.489355 GAGGGAGTAGTACCTAGCCTTC 58.511 54.545 0.00 0.00 37.18 3.46
5109 5500 4.935205 TGGCACCAAACGATCTATATATGC 59.065 41.667 0.00 0.00 0.00 3.14
5131 5522 5.689514 TGCCAATCAAACAAAGTTAATGTCG 59.310 36.000 0.00 0.00 0.00 4.35
5150 5541 7.623268 ATGTCGAACTTTATTTCTTTTGTGC 57.377 32.000 0.00 0.00 0.00 4.57
5166 5557 8.458573 TCTTTTGTGCTTAGAAAATAAGGTGA 57.541 30.769 0.00 0.00 0.00 4.02
5204 5595 9.862371 TTTCAAGTTAATTACTGCAAAGTTTGA 57.138 25.926 19.82 3.95 37.12 2.69
5206 5597 9.677567 TCAAGTTAATTACTGCAAAGTTTGATC 57.322 29.630 19.82 3.11 37.12 2.92
5207 5598 9.462174 CAAGTTAATTACTGCAAAGTTTGATCA 57.538 29.630 19.82 7.67 37.12 2.92
5209 5600 9.463443 AGTTAATTACTGCAAAGTTTGATCAAC 57.537 29.630 19.82 6.05 35.19 3.18
5253 5644 9.893305 ACAACTAGTACAATACAAAATTTCAGC 57.107 29.630 0.00 0.00 0.00 4.26
5254 5645 9.891828 CAACTAGTACAATACAAAATTTCAGCA 57.108 29.630 0.00 0.00 0.00 4.41
5283 5674 7.726033 AAACTAAATGCCATAAATACCACCA 57.274 32.000 0.00 0.00 0.00 4.17
5284 5675 6.709018 ACTAAATGCCATAAATACCACCAC 57.291 37.500 0.00 0.00 0.00 4.16
5285 5676 6.431722 ACTAAATGCCATAAATACCACCACT 58.568 36.000 0.00 0.00 0.00 4.00
5286 5677 7.579105 ACTAAATGCCATAAATACCACCACTA 58.421 34.615 0.00 0.00 0.00 2.74
5287 5678 8.224720 ACTAAATGCCATAAATACCACCACTAT 58.775 33.333 0.00 0.00 0.00 2.12
5288 5679 7.524717 AAATGCCATAAATACCACCACTATC 57.475 36.000 0.00 0.00 0.00 2.08
5289 5680 4.637276 TGCCATAAATACCACCACTATCG 58.363 43.478 0.00 0.00 0.00 2.92
5290 5681 3.435671 GCCATAAATACCACCACTATCGC 59.564 47.826 0.00 0.00 0.00 4.58
5291 5682 4.802918 GCCATAAATACCACCACTATCGCT 60.803 45.833 0.00 0.00 0.00 4.93
5292 5683 4.929808 CCATAAATACCACCACTATCGCTC 59.070 45.833 0.00 0.00 0.00 5.03
5293 5684 5.510690 CCATAAATACCACCACTATCGCTCA 60.511 44.000 0.00 0.00 0.00 4.26
5294 5685 4.481368 AAATACCACCACTATCGCTCAA 57.519 40.909 0.00 0.00 0.00 3.02
5295 5686 4.481368 AATACCACCACTATCGCTCAAA 57.519 40.909 0.00 0.00 0.00 2.69
5296 5687 2.094762 ACCACCACTATCGCTCAAAC 57.905 50.000 0.00 0.00 0.00 2.93
5297 5688 1.338769 ACCACCACTATCGCTCAAACC 60.339 52.381 0.00 0.00 0.00 3.27
5298 5689 1.369625 CACCACTATCGCTCAAACCC 58.630 55.000 0.00 0.00 0.00 4.11
5299 5690 0.252197 ACCACTATCGCTCAAACCCC 59.748 55.000 0.00 0.00 0.00 4.95
5300 5691 0.251916 CCACTATCGCTCAAACCCCA 59.748 55.000 0.00 0.00 0.00 4.96
5301 5692 1.339631 CCACTATCGCTCAAACCCCAA 60.340 52.381 0.00 0.00 0.00 4.12
5302 5693 2.432444 CACTATCGCTCAAACCCCAAA 58.568 47.619 0.00 0.00 0.00 3.28
5303 5694 2.817258 CACTATCGCTCAAACCCCAAAA 59.183 45.455 0.00 0.00 0.00 2.44
5304 5695 2.817844 ACTATCGCTCAAACCCCAAAAC 59.182 45.455 0.00 0.00 0.00 2.43
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 7.985184 GGGTGACTATTAGTGTTGATTACATCA 59.015 37.037 0.00 0.00 39.39 3.07
28 29 6.328934 TCATATTGGTACATGTGGGTGACTAT 59.671 38.462 9.11 0.00 39.30 2.12
41 42 9.967451 TTTCTATCAAAACCTCATATTGGTACA 57.033 29.630 0.00 0.00 36.69 2.90
50 51 9.300681 TGTTCAATCTTTCTATCAAAACCTCAT 57.699 29.630 0.00 0.00 0.00 2.90
52 53 8.567948 TGTGTTCAATCTTTCTATCAAAACCTC 58.432 33.333 0.00 0.00 0.00 3.85
61 62 9.730705 TTCATCTCTTGTGTTCAATCTTTCTAT 57.269 29.630 0.00 0.00 32.82 1.98
64 65 7.802251 CAGTTCATCTCTTGTGTTCAATCTTTC 59.198 37.037 0.00 0.00 32.82 2.62
90 91 2.648059 CACCATCTCATCTCAAACCCC 58.352 52.381 0.00 0.00 0.00 4.95
101 102 5.894298 ATATCTTTACCAGCACCATCTCA 57.106 39.130 0.00 0.00 0.00 3.27
116 117 9.517868 GGAGGATCAATCTTCATCAATATCTTT 57.482 33.333 4.74 0.00 34.89 2.52
122 123 5.658198 TGGGAGGATCAATCTTCATCAAT 57.342 39.130 4.74 0.00 34.89 2.57
129 130 5.658198 TTCATCATGGGAGGATCAATCTT 57.342 39.130 0.00 0.00 33.24 2.40
137 138 1.985622 ACCCTTTCATCATGGGAGGA 58.014 50.000 8.37 0.00 41.81 3.71
139 140 3.091633 ACAACCCTTTCATCATGGGAG 57.908 47.619 4.11 0.00 41.81 4.30
140 141 3.164268 CAACAACCCTTTCATCATGGGA 58.836 45.455 4.11 0.00 41.81 4.37
145 146 3.304911 TCACCAACAACCCTTTCATCA 57.695 42.857 0.00 0.00 0.00 3.07
150 151 1.953686 CGTCATCACCAACAACCCTTT 59.046 47.619 0.00 0.00 0.00 3.11
151 152 1.142060 TCGTCATCACCAACAACCCTT 59.858 47.619 0.00 0.00 0.00 3.95
154 155 1.468520 CCATCGTCATCACCAACAACC 59.531 52.381 0.00 0.00 0.00 3.77
174 175 1.809869 GGGAGGCGGAAATCAAAGC 59.190 57.895 0.00 0.00 0.00 3.51
176 177 4.312052 CGGGAGGCGGAAATCAAA 57.688 55.556 0.00 0.00 0.00 2.69
203 204 1.227674 GAGCGATTCTGCCGGGAAT 60.228 57.895 2.18 4.34 38.47 3.01
204 205 2.186903 GAGCGATTCTGCCGGGAA 59.813 61.111 2.18 0.00 34.65 3.97
205 206 3.849951 GGAGCGATTCTGCCGGGA 61.850 66.667 2.18 0.00 34.65 5.14
212 213 0.179097 GCTTTCCGAGGAGCGATTCT 60.179 55.000 0.00 0.00 44.57 2.40
221 222 2.599659 GAGCATTTTTGCTTTCCGAGG 58.400 47.619 1.51 0.00 46.36 4.63
223 224 2.030007 CAGGAGCATTTTTGCTTTCCGA 60.030 45.455 1.51 0.00 46.36 4.55
228 230 1.345063 AGGCAGGAGCATTTTTGCTT 58.655 45.000 1.51 0.00 46.36 3.91
236 238 1.678101 GCGAAATTTAGGCAGGAGCAT 59.322 47.619 8.42 0.00 44.61 3.79
262 264 2.734591 GGATGGAGCGTCGCCATA 59.265 61.111 14.86 0.00 43.71 2.74
269 271 0.831307 GGACTTTAGGGATGGAGCGT 59.169 55.000 0.00 0.00 0.00 5.07
301 303 9.520515 CTGGTATATAAATTCATTTGCCCTAGT 57.479 33.333 0.00 0.00 0.00 2.57
312 317 7.665559 GTGCCCATCTTCTGGTATATAAATTCA 59.334 37.037 0.00 0.00 44.30 2.57
313 318 7.121315 GGTGCCCATCTTCTGGTATATAAATTC 59.879 40.741 0.00 0.00 44.30 2.17
314 319 6.948309 GGTGCCCATCTTCTGGTATATAAATT 59.052 38.462 0.00 0.00 44.30 1.82
316 321 5.512404 CGGTGCCCATCTTCTGGTATATAAA 60.512 44.000 0.00 0.00 44.30 1.40
359 364 3.902112 ACCCAGGTGCCCACAAGG 61.902 66.667 0.40 1.61 39.47 3.61
360 365 2.598394 CACCCAGGTGCCCACAAG 60.598 66.667 3.41 0.00 39.39 3.16
361 366 4.217210 CCACCCAGGTGCCCACAA 62.217 66.667 11.52 0.00 44.16 3.33
379 384 2.024941 AGAAAATAAGTGCCAGAGGGGG 60.025 50.000 0.00 0.00 37.04 5.40
380 385 3.054065 AGAGAAAATAAGTGCCAGAGGGG 60.054 47.826 0.00 0.00 40.85 4.79
381 386 4.227864 AGAGAAAATAAGTGCCAGAGGG 57.772 45.455 0.00 0.00 37.18 4.30
382 387 8.964476 TTATTAGAGAAAATAAGTGCCAGAGG 57.036 34.615 0.00 0.00 29.95 3.69
425 430 9.161629 TGAGCTGAAATTTGACGAAGATTTATA 57.838 29.630 0.00 0.00 0.00 0.98
426 431 8.044060 TGAGCTGAAATTTGACGAAGATTTAT 57.956 30.769 0.00 0.00 0.00 1.40
427 432 7.433708 TGAGCTGAAATTTGACGAAGATTTA 57.566 32.000 0.00 0.00 0.00 1.40
428 433 6.317789 TGAGCTGAAATTTGACGAAGATTT 57.682 33.333 0.00 0.00 0.00 2.17
429 434 5.947228 TGAGCTGAAATTTGACGAAGATT 57.053 34.783 0.00 0.00 0.00 2.40
430 435 6.506500 AATGAGCTGAAATTTGACGAAGAT 57.493 33.333 0.00 0.00 0.00 2.40
431 436 5.947228 AATGAGCTGAAATTTGACGAAGA 57.053 34.783 0.00 0.00 0.00 2.87
432 437 6.144854 TCAAATGAGCTGAAATTTGACGAAG 58.855 36.000 18.22 1.14 44.05 3.79
433 438 6.070897 TCAAATGAGCTGAAATTTGACGAA 57.929 33.333 18.22 4.11 44.05 3.85
434 439 5.687770 TCAAATGAGCTGAAATTTGACGA 57.312 34.783 18.22 4.37 44.05 4.20
435 440 6.144854 TCTTCAAATGAGCTGAAATTTGACG 58.855 36.000 20.40 19.00 46.88 4.35
436 441 7.597743 ACATCTTCAAATGAGCTGAAATTTGAC 59.402 33.333 20.40 0.00 46.88 3.18
437 442 7.597369 CACATCTTCAAATGAGCTGAAATTTGA 59.403 33.333 18.22 18.22 46.06 2.69
438 443 7.621426 GCACATCTTCAAATGAGCTGAAATTTG 60.621 37.037 15.29 15.29 42.53 2.32
439 444 6.367969 GCACATCTTCAAATGAGCTGAAATTT 59.632 34.615 0.00 0.00 39.32 1.82
440 445 5.867716 GCACATCTTCAAATGAGCTGAAATT 59.132 36.000 0.00 0.00 39.32 1.82
441 446 5.047590 TGCACATCTTCAAATGAGCTGAAAT 60.048 36.000 0.00 0.00 41.85 2.17
442 447 4.278919 TGCACATCTTCAAATGAGCTGAAA 59.721 37.500 0.00 0.00 41.85 2.69
443 448 3.822167 TGCACATCTTCAAATGAGCTGAA 59.178 39.130 0.00 0.00 41.85 3.02
444 449 3.414269 TGCACATCTTCAAATGAGCTGA 58.586 40.909 0.00 0.00 41.85 4.26
445 450 3.439129 TCTGCACATCTTCAAATGAGCTG 59.561 43.478 0.00 7.16 41.85 4.24
446 451 3.682696 TCTGCACATCTTCAAATGAGCT 58.317 40.909 7.59 0.00 41.85 4.09
447 452 4.430137 TTCTGCACATCTTCAAATGAGC 57.570 40.909 0.24 0.24 41.73 4.26
448 453 7.759465 ACTTATTCTGCACATCTTCAAATGAG 58.241 34.615 0.00 0.00 0.00 2.90
449 454 7.692460 ACTTATTCTGCACATCTTCAAATGA 57.308 32.000 0.00 0.00 0.00 2.57
450 455 9.661187 GATACTTATTCTGCACATCTTCAAATG 57.339 33.333 0.00 0.00 0.00 2.32
451 456 9.624373 AGATACTTATTCTGCACATCTTCAAAT 57.376 29.630 0.00 0.00 0.00 2.32
452 457 9.102757 GAGATACTTATTCTGCACATCTTCAAA 57.897 33.333 0.00 0.00 0.00 2.69
453 458 8.481314 AGAGATACTTATTCTGCACATCTTCAA 58.519 33.333 0.00 0.00 0.00 2.69
454 459 7.924947 CAGAGATACTTATTCTGCACATCTTCA 59.075 37.037 0.00 0.00 32.78 3.02
455 460 8.140628 TCAGAGATACTTATTCTGCACATCTTC 58.859 37.037 0.00 0.00 38.52 2.87
456 461 7.925483 GTCAGAGATACTTATTCTGCACATCTT 59.075 37.037 0.00 0.00 38.52 2.40
457 462 7.432869 GTCAGAGATACTTATTCTGCACATCT 58.567 38.462 0.00 0.00 38.52 2.90
458 463 6.362016 CGTCAGAGATACTTATTCTGCACATC 59.638 42.308 0.00 0.00 38.52 3.06
459 464 6.183360 ACGTCAGAGATACTTATTCTGCACAT 60.183 38.462 0.00 0.00 38.52 3.21
460 465 5.125578 ACGTCAGAGATACTTATTCTGCACA 59.874 40.000 0.00 0.00 38.52 4.57
461 466 5.583495 ACGTCAGAGATACTTATTCTGCAC 58.417 41.667 0.00 0.00 38.52 4.57
462 467 5.836821 ACGTCAGAGATACTTATTCTGCA 57.163 39.130 0.00 0.00 38.52 4.41
463 468 5.854338 GCTACGTCAGAGATACTTATTCTGC 59.146 44.000 0.00 0.00 38.52 4.26
464 469 7.197071 AGCTACGTCAGAGATACTTATTCTG 57.803 40.000 0.00 0.00 39.69 3.02
465 470 7.811117 AAGCTACGTCAGAGATACTTATTCT 57.189 36.000 0.00 0.00 0.00 2.40
466 471 8.859517 AAAAGCTACGTCAGAGATACTTATTC 57.140 34.615 0.00 0.00 0.00 1.75
467 472 9.088512 CAAAAAGCTACGTCAGAGATACTTATT 57.911 33.333 0.00 0.00 0.00 1.40
468 473 8.467598 TCAAAAAGCTACGTCAGAGATACTTAT 58.532 33.333 0.00 0.00 0.00 1.73
469 474 7.823665 TCAAAAAGCTACGTCAGAGATACTTA 58.176 34.615 0.00 0.00 0.00 2.24
470 475 6.688578 TCAAAAAGCTACGTCAGAGATACTT 58.311 36.000 0.00 0.00 0.00 2.24
471 476 6.268825 TCAAAAAGCTACGTCAGAGATACT 57.731 37.500 0.00 0.00 0.00 2.12
472 477 5.517054 CCTCAAAAAGCTACGTCAGAGATAC 59.483 44.000 0.00 0.00 0.00 2.24
473 478 5.185249 ACCTCAAAAAGCTACGTCAGAGATA 59.815 40.000 0.00 0.00 0.00 1.98
474 479 4.021016 ACCTCAAAAAGCTACGTCAGAGAT 60.021 41.667 0.00 0.00 0.00 2.75
475 480 3.321111 ACCTCAAAAAGCTACGTCAGAGA 59.679 43.478 0.00 0.00 0.00 3.10
476 481 3.654414 ACCTCAAAAAGCTACGTCAGAG 58.346 45.455 0.00 0.00 0.00 3.35
477 482 3.746045 ACCTCAAAAAGCTACGTCAGA 57.254 42.857 0.00 0.00 0.00 3.27
478 483 3.807622 TGAACCTCAAAAAGCTACGTCAG 59.192 43.478 0.00 0.00 0.00 3.51
479 484 3.799366 TGAACCTCAAAAAGCTACGTCA 58.201 40.909 0.00 0.00 0.00 4.35
480 485 4.056050 TCTGAACCTCAAAAAGCTACGTC 58.944 43.478 0.00 0.00 0.00 4.34
481 486 4.067972 TCTGAACCTCAAAAAGCTACGT 57.932 40.909 0.00 0.00 0.00 3.57
482 487 5.390991 GGATTCTGAACCTCAAAAAGCTACG 60.391 44.000 0.00 0.00 0.00 3.51
483 488 5.473504 TGGATTCTGAACCTCAAAAAGCTAC 59.526 40.000 0.00 0.00 0.00 3.58
484 489 5.630121 TGGATTCTGAACCTCAAAAAGCTA 58.370 37.500 0.00 0.00 0.00 3.32
485 490 4.473444 TGGATTCTGAACCTCAAAAAGCT 58.527 39.130 0.00 0.00 0.00 3.74
486 491 4.802999 CTGGATTCTGAACCTCAAAAAGC 58.197 43.478 0.00 0.00 0.00 3.51
487 492 4.522022 AGCTGGATTCTGAACCTCAAAAAG 59.478 41.667 0.00 0.00 0.00 2.27
488 493 4.279169 CAGCTGGATTCTGAACCTCAAAAA 59.721 41.667 5.57 0.00 33.54 1.94
489 494 3.822735 CAGCTGGATTCTGAACCTCAAAA 59.177 43.478 5.57 0.00 33.54 2.44
490 495 3.415212 CAGCTGGATTCTGAACCTCAAA 58.585 45.455 5.57 0.00 33.54 2.69
491 496 2.877300 GCAGCTGGATTCTGAACCTCAA 60.877 50.000 17.12 0.00 33.54 3.02
492 497 1.339438 GCAGCTGGATTCTGAACCTCA 60.339 52.381 17.12 0.00 33.54 3.86
493 498 1.377536 GCAGCTGGATTCTGAACCTC 58.622 55.000 17.12 0.00 33.54 3.85
494 499 0.034670 GGCAGCTGGATTCTGAACCT 60.035 55.000 17.12 0.00 33.54 3.50
495 500 1.372087 CGGCAGCTGGATTCTGAACC 61.372 60.000 17.12 3.40 33.54 3.62
496 501 1.372087 CCGGCAGCTGGATTCTGAAC 61.372 60.000 16.28 0.00 33.54 3.18
497 502 1.078214 CCGGCAGCTGGATTCTGAA 60.078 57.895 16.28 0.00 33.54 3.02
498 503 2.586245 CCGGCAGCTGGATTCTGA 59.414 61.111 16.28 0.00 33.54 3.27
499 504 3.207669 GCCGGCAGCTGGATTCTG 61.208 66.667 25.86 3.24 38.99 3.02
500 505 2.563013 ATTGCCGGCAGCTGGATTCT 62.563 55.000 30.75 1.67 44.23 2.40
501 506 2.068277 GATTGCCGGCAGCTGGATTC 62.068 60.000 30.75 14.36 44.23 2.52
502 507 2.043652 ATTGCCGGCAGCTGGATT 60.044 55.556 30.75 6.83 44.23 3.01
503 508 2.517875 GATTGCCGGCAGCTGGAT 60.518 61.111 30.75 20.23 44.23 3.41
504 509 3.687321 GAGATTGCCGGCAGCTGGA 62.687 63.158 30.89 18.35 44.23 3.86
505 510 3.207669 GAGATTGCCGGCAGCTGG 61.208 66.667 30.89 17.00 44.23 4.85
506 511 3.207669 GGAGATTGCCGGCAGCTG 61.208 66.667 30.89 10.11 44.23 4.24
507 512 4.496336 GGGAGATTGCCGGCAGCT 62.496 66.667 30.75 28.91 44.23 4.24
508 513 4.496336 AGGGAGATTGCCGGCAGC 62.496 66.667 30.75 24.71 44.14 5.25
509 514 2.203126 GAGGGAGATTGCCGGCAG 60.203 66.667 30.75 0.00 30.73 4.85
510 515 2.257409 GAAGAGGGAGATTGCCGGCA 62.257 60.000 29.03 29.03 30.73 5.69
511 516 1.524849 GAAGAGGGAGATTGCCGGC 60.525 63.158 22.73 22.73 30.73 6.13
512 517 0.471617 ATGAAGAGGGAGATTGCCGG 59.528 55.000 0.00 0.00 30.73 6.13
513 518 3.692257 ATATGAAGAGGGAGATTGCCG 57.308 47.619 0.00 0.00 30.73 5.69
514 519 8.414629 AAATTTATATGAAGAGGGAGATTGCC 57.585 34.615 0.00 0.00 0.00 4.52
515 520 9.688592 CAAAATTTATATGAAGAGGGAGATTGC 57.311 33.333 0.00 0.00 0.00 3.56
611 616 8.950210 CCATTTTGTATCATCTGTTTCTACTGT 58.050 33.333 0.00 0.00 0.00 3.55
612 617 9.166173 TCCATTTTGTATCATCTGTTTCTACTG 57.834 33.333 0.00 0.00 0.00 2.74
613 618 9.167311 GTCCATTTTGTATCATCTGTTTCTACT 57.833 33.333 0.00 0.00 0.00 2.57
614 619 8.116753 CGTCCATTTTGTATCATCTGTTTCTAC 58.883 37.037 0.00 0.00 0.00 2.59
615 620 7.822334 ACGTCCATTTTGTATCATCTGTTTCTA 59.178 33.333 0.00 0.00 0.00 2.10
616 621 6.655003 ACGTCCATTTTGTATCATCTGTTTCT 59.345 34.615 0.00 0.00 0.00 2.52
617 622 6.842163 ACGTCCATTTTGTATCATCTGTTTC 58.158 36.000 0.00 0.00 0.00 2.78
618 623 6.817765 ACGTCCATTTTGTATCATCTGTTT 57.182 33.333 0.00 0.00 0.00 2.83
619 624 7.768582 TGATACGTCCATTTTGTATCATCTGTT 59.231 33.333 9.53 0.00 45.63 3.16
620 625 7.272244 TGATACGTCCATTTTGTATCATCTGT 58.728 34.615 9.53 0.00 45.63 3.41
621 626 7.713764 TGATACGTCCATTTTGTATCATCTG 57.286 36.000 9.53 0.00 45.63 2.90
640 645 4.925068 ACCAGTTAACCGATACGTGATAC 58.075 43.478 0.88 0.00 0.00 2.24
641 646 5.581126 AACCAGTTAACCGATACGTGATA 57.419 39.130 0.88 0.00 0.00 2.15
642 647 4.460948 AACCAGTTAACCGATACGTGAT 57.539 40.909 0.88 0.00 0.00 3.06
643 648 3.940209 AACCAGTTAACCGATACGTGA 57.060 42.857 0.88 0.00 0.00 4.35
644 649 3.742369 ACAAACCAGTTAACCGATACGTG 59.258 43.478 0.88 0.00 0.00 4.49
645 650 3.993920 ACAAACCAGTTAACCGATACGT 58.006 40.909 0.88 0.00 0.00 3.57
646 651 6.091169 ACAATACAAACCAGTTAACCGATACG 59.909 38.462 0.88 0.00 0.00 3.06
647 652 7.368480 ACAATACAAACCAGTTAACCGATAC 57.632 36.000 0.88 0.00 0.00 2.24
675 680 0.759959 TTGGACCGAGGCAACAGTAA 59.240 50.000 0.00 0.00 41.41 2.24
678 683 0.951040 GTCTTGGACCGAGGCAACAG 60.951 60.000 8.60 0.00 41.41 3.16
703 708 4.023021 GCACAAATAGAAACCCGTTAACCA 60.023 41.667 0.00 0.00 0.00 3.67
704 709 4.216902 AGCACAAATAGAAACCCGTTAACC 59.783 41.667 0.00 0.00 0.00 2.85
750 767 8.991783 ATCAAAGATTACAATCCTGATGACAT 57.008 30.769 12.79 0.00 37.23 3.06
769 786 8.197988 ACTCCTATACTGCGTAAAAATCAAAG 57.802 34.615 0.00 0.00 0.00 2.77
785 802 5.693555 GGCGTGGTAAAACATACTCCTATAC 59.306 44.000 0.00 0.00 0.00 1.47
786 803 5.363292 TGGCGTGGTAAAACATACTCCTATA 59.637 40.000 0.00 0.00 0.00 1.31
821 838 1.077716 ACTGTAAATGGAGGCCCGC 60.078 57.895 0.00 0.00 34.29 6.13
823 840 0.034089 AGCACTGTAAATGGAGGCCC 60.034 55.000 0.00 0.00 0.00 5.80
824 841 1.839424 AAGCACTGTAAATGGAGGCC 58.161 50.000 0.00 0.00 0.00 5.19
855 917 4.554036 GGGGAGACTGCCGCCATC 62.554 72.222 6.95 0.00 36.33 3.51
867 929 1.677637 GGAGAGCGGTTACAGGGGAG 61.678 65.000 0.00 0.00 0.00 4.30
882 944 2.625314 CGGTTGATCTGCTAGATGGAGA 59.375 50.000 0.00 0.00 46.96 3.71
889 951 1.927174 CGGTTTCGGTTGATCTGCTAG 59.073 52.381 0.00 0.00 0.00 3.42
890 952 2.004583 CGGTTTCGGTTGATCTGCTA 57.995 50.000 0.00 0.00 0.00 3.49
934 996 2.777832 GGCAGGATGACTCTGTCTTT 57.222 50.000 0.00 0.00 44.72 2.52
946 1008 0.919710 GTGAGGGGTTAAGGCAGGAT 59.080 55.000 0.00 0.00 0.00 3.24
950 1012 0.690762 GTGAGTGAGGGGTTAAGGCA 59.309 55.000 0.00 0.00 0.00 4.75
1033 1095 4.451150 GCTGTCGATCGGTGCCCA 62.451 66.667 16.41 3.97 0.00 5.36
1049 1111 3.412879 GAGCACGTACGAGAGGGGC 62.413 68.421 24.41 14.24 42.97 5.80
1066 1128 2.745308 CCGGTCTCCATGGCCATGA 61.745 63.158 41.32 26.84 41.50 3.07
1099 1161 4.980805 GCCGGCGTGTGGACTGAA 62.981 66.667 12.58 0.00 0.00 3.02
1257 1319 4.980805 GTGCGACTCGGTGGCCAA 62.981 66.667 7.24 0.00 36.46 4.52
1338 1400 7.094592 TGACAAATTGCATTTCATCCTACGTAA 60.095 33.333 0.00 0.00 0.00 3.18
1340 1402 5.182950 TGACAAATTGCATTTCATCCTACGT 59.817 36.000 0.00 0.00 0.00 3.57
1341 1403 5.639757 TGACAAATTGCATTTCATCCTACG 58.360 37.500 0.00 0.00 0.00 3.51
1342 1404 7.887996 TTTGACAAATTGCATTTCATCCTAC 57.112 32.000 0.00 0.00 0.00 3.18
1343 1405 8.095792 ACATTTGACAAATTGCATTTCATCCTA 58.904 29.630 10.77 0.00 0.00 2.94
1344 1406 6.938030 ACATTTGACAAATTGCATTTCATCCT 59.062 30.769 10.77 0.00 0.00 3.24
1345 1407 7.018826 CACATTTGACAAATTGCATTTCATCC 58.981 34.615 10.77 0.00 0.00 3.51
1346 1408 7.532546 CACACATTTGACAAATTGCATTTCATC 59.467 33.333 10.77 0.00 0.00 2.92
1347 1409 7.012515 ACACACATTTGACAAATTGCATTTCAT 59.987 29.630 10.77 0.00 0.00 2.57
1348 1410 6.315642 ACACACATTTGACAAATTGCATTTCA 59.684 30.769 10.77 0.00 0.00 2.69
1349 1411 6.717413 ACACACATTTGACAAATTGCATTTC 58.283 32.000 10.77 0.00 0.00 2.17
1350 1412 6.315642 TGACACACATTTGACAAATTGCATTT 59.684 30.769 10.77 0.00 0.00 2.32
1351 1413 5.816258 TGACACACATTTGACAAATTGCATT 59.184 32.000 10.77 0.00 0.00 3.56
1352 1414 5.234757 GTGACACACATTTGACAAATTGCAT 59.765 36.000 10.77 5.42 34.08 3.96
1353 1415 4.565962 GTGACACACATTTGACAAATTGCA 59.434 37.500 10.77 7.20 34.08 4.08
1354 1416 4.317278 CGTGACACACATTTGACAAATTGC 60.317 41.667 10.77 5.09 33.40 3.56
1355 1417 4.206814 CCGTGACACACATTTGACAAATTG 59.793 41.667 10.77 13.77 33.40 2.32
1356 1418 4.358851 CCGTGACACACATTTGACAAATT 58.641 39.130 10.77 0.00 33.40 1.82
1357 1419 3.795150 GCCGTGACACACATTTGACAAAT 60.795 43.478 7.62 7.62 33.40 2.32
1358 1420 2.478709 GCCGTGACACACATTTGACAAA 60.479 45.455 6.37 2.48 33.40 2.83
1359 1421 1.064803 GCCGTGACACACATTTGACAA 59.935 47.619 6.37 0.00 33.40 3.18
1360 1422 0.660488 GCCGTGACACACATTTGACA 59.340 50.000 6.37 0.00 33.40 3.58
1361 1423 0.944386 AGCCGTGACACACATTTGAC 59.056 50.000 6.37 0.00 33.40 3.18
1362 1424 0.943673 CAGCCGTGACACACATTTGA 59.056 50.000 6.37 0.00 33.40 2.69
1363 1425 0.943673 TCAGCCGTGACACACATTTG 59.056 50.000 6.37 0.00 33.40 2.32
1376 1438 2.006062 CGTGTCGATCGATCAGCCG 61.006 63.158 22.50 16.03 0.00 5.52
1510 1576 3.474600 ACTATGCATGCAGGAAGATGAC 58.525 45.455 26.69 0.00 0.00 3.06
1817 1886 0.694444 GGCAGATCCCCTTCCAGGTA 60.694 60.000 0.00 0.00 31.93 3.08
1842 1911 0.817634 TTGAACTTGGGGTCGTGCTG 60.818 55.000 0.00 0.00 0.00 4.41
1895 1978 8.148351 AGATACCGCAGCTGAAATAATAACTAA 58.852 33.333 20.43 0.00 0.00 2.24
1896 1979 7.667557 AGATACCGCAGCTGAAATAATAACTA 58.332 34.615 20.43 0.00 0.00 2.24
1897 1980 6.525629 AGATACCGCAGCTGAAATAATAACT 58.474 36.000 20.43 2.03 0.00 2.24
1898 1981 6.787085 AGATACCGCAGCTGAAATAATAAC 57.213 37.500 20.43 0.00 0.00 1.89
2448 2535 1.207089 CGGTTGAAGATGAGGTAGCCA 59.793 52.381 0.00 0.00 0.00 4.75
2458 2545 1.002134 CCCTGGTGCGGTTGAAGAT 60.002 57.895 0.00 0.00 0.00 2.40
2511 2598 2.711315 AGGGTAGAAGCCTTTCCCC 58.289 57.895 8.87 4.80 45.25 4.81
2518 2605 3.134458 CGATGATCAAAGGGTAGAAGCC 58.866 50.000 0.00 0.00 35.59 4.35
2529 2616 1.081556 CGTCGGTGGCGATGATCAAA 61.082 55.000 0.00 0.00 0.00 2.69
2530 2617 1.518352 CGTCGGTGGCGATGATCAA 60.518 57.895 0.00 0.00 0.00 2.57
2590 2677 2.333417 GGAGCTCGGACGTCAGTGA 61.333 63.158 18.91 10.79 0.00 3.41
2703 2802 1.568612 CGCAGCACACCACGATCTTT 61.569 55.000 0.00 0.00 0.00 2.52
2884 2983 2.024176 GTGGACTTGATGTACGCCAT 57.976 50.000 0.00 0.00 34.01 4.40
2889 2988 0.611714 ACGGGGTGGACTTGATGTAC 59.388 55.000 0.00 0.00 0.00 2.90
2952 3077 6.308015 ACTAGGGCTCACATTATTGTTACA 57.692 37.500 0.00 0.00 32.34 2.41
2962 3087 1.209019 CAGCAGAACTAGGGCTCACAT 59.791 52.381 0.00 0.00 35.27 3.21
2964 3089 0.107945 CCAGCAGAACTAGGGCTCAC 60.108 60.000 0.00 0.00 35.27 3.51
2970 3095 2.832129 TCAGTAACCCAGCAGAACTAGG 59.168 50.000 0.00 0.00 32.57 3.02
2971 3096 3.677424 GCTCAGTAACCCAGCAGAACTAG 60.677 52.174 0.00 0.00 33.06 2.57
2973 3098 1.002544 GCTCAGTAACCCAGCAGAACT 59.997 52.381 0.00 0.00 33.06 3.01
2993 3118 3.124466 TGACACGAGCACAAATTAATCCG 59.876 43.478 0.00 0.00 0.00 4.18
3033 3158 0.738975 TCGTCGCCTTCGAGATGAAT 59.261 50.000 0.00 0.00 46.46 2.57
3151 3276 4.221482 TGAGGCTGTGCTTATGATCGATAT 59.779 41.667 0.00 0.00 0.00 1.63
3194 3319 7.990541 TGAAAGAATTCACATCAAGTTGTTG 57.009 32.000 8.44 11.57 40.59 3.33
3477 3602 2.749110 GAACAGCTCGTCGTGGCAGA 62.749 60.000 13.30 0.00 0.00 4.26
3542 3680 3.207669 GATTGGCCGCTGCTCCAG 61.208 66.667 0.00 0.00 37.74 3.86
3556 3694 1.925255 TGCAGGAAGGGATTCAGGATT 59.075 47.619 0.00 0.00 0.00 3.01
3702 3840 3.505790 AACCTGCCCATTGCCGTCA 62.506 57.895 0.00 0.00 40.16 4.35
3709 3847 0.400213 TCTCGTTGAACCTGCCCATT 59.600 50.000 0.00 0.00 0.00 3.16
4078 4216 1.123077 ACATCTTGCGCCTCCTGATA 58.877 50.000 4.18 0.00 0.00 2.15
4154 4296 2.094675 CCCACCACTGCCTAATGAAAG 58.905 52.381 0.00 0.00 0.00 2.62
4158 4300 1.001020 TGCCCACCACTGCCTAATG 60.001 57.895 0.00 0.00 0.00 1.90
4173 4315 1.299468 CATCCTCTCGCTACGTGCC 60.299 63.158 0.00 0.00 38.78 5.01
4197 4342 0.535335 GACCAGATTCACCGCCACTA 59.465 55.000 0.00 0.00 0.00 2.74
4286 4436 9.140286 CGACAGAAAATCACAGAAGTAATAAGA 57.860 33.333 0.00 0.00 0.00 2.10
4287 4437 7.900352 GCGACAGAAAATCACAGAAGTAATAAG 59.100 37.037 0.00 0.00 0.00 1.73
4294 4623 2.723010 GCGCGACAGAAAATCACAGAAG 60.723 50.000 12.10 0.00 0.00 2.85
4297 4626 0.517132 CGCGCGACAGAAAATCACAG 60.517 55.000 28.94 0.00 0.00 3.66
4302 4631 2.113910 AAAAACGCGCGACAGAAAAT 57.886 40.000 39.36 8.45 0.00 1.82
4323 4652 4.641094 TCAAAAGTCGGGCAACTTAAAAGA 59.359 37.500 5.12 0.34 38.52 2.52
4329 4658 3.550030 CGAATTCAAAAGTCGGGCAACTT 60.550 43.478 6.22 0.00 44.36 2.66
4332 4661 2.697431 CGAATTCAAAAGTCGGGCAA 57.303 45.000 6.22 0.00 44.36 4.52
4338 4667 3.120649 CGACTGACCCGAATTCAAAAGTC 60.121 47.826 6.22 9.33 0.00 3.01
4339 4668 2.806244 CGACTGACCCGAATTCAAAAGT 59.194 45.455 6.22 1.46 0.00 2.66
4340 4669 3.064207 TCGACTGACCCGAATTCAAAAG 58.936 45.455 6.22 0.00 32.64 2.27
4464 4829 5.664294 ACATCCGTATGTGGTTTACAGTA 57.336 39.130 0.00 0.00 44.79 2.74
4465 4830 4.546829 ACATCCGTATGTGGTTTACAGT 57.453 40.909 0.00 0.00 44.79 3.55
4466 4831 9.569167 CTATATACATCCGTATGTGGTTTACAG 57.431 37.037 3.56 0.00 45.99 2.74
4467 4832 9.299465 TCTATATACATCCGTATGTGGTTTACA 57.701 33.333 3.56 0.00 45.99 2.41
4470 4835 7.764443 GCATCTATATACATCCGTATGTGGTTT 59.236 37.037 3.56 0.00 45.99 3.27
4471 4836 7.093509 TGCATCTATATACATCCGTATGTGGTT 60.094 37.037 3.56 0.00 45.99 3.67
4472 4837 6.379988 TGCATCTATATACATCCGTATGTGGT 59.620 38.462 3.56 0.00 45.99 4.16
4473 4838 6.805713 TGCATCTATATACATCCGTATGTGG 58.194 40.000 3.56 0.00 45.99 4.17
4474 4839 8.877808 AATGCATCTATATACATCCGTATGTG 57.122 34.615 3.56 0.00 45.99 3.21
4479 4844 9.944376 ACTTAAAATGCATCTATATACATCCGT 57.056 29.630 0.00 0.00 0.00 4.69
4502 4867 9.010029 ACGGAACAAAATGATAAATCTACACTT 57.990 29.630 0.00 0.00 0.00 3.16
4503 4868 8.561738 ACGGAACAAAATGATAAATCTACACT 57.438 30.769 0.00 0.00 0.00 3.55
4512 4877 9.438228 TGAACTACATACGGAACAAAATGATAA 57.562 29.630 0.00 0.00 0.00 1.75
4513 4878 9.607988 ATGAACTACATACGGAACAAAATGATA 57.392 29.630 0.00 0.00 37.46 2.15
4514 4879 7.915293 TGAACTACATACGGAACAAAATGAT 57.085 32.000 0.00 0.00 0.00 2.45
4515 4880 7.822334 AGATGAACTACATACGGAACAAAATGA 59.178 33.333 0.00 0.00 39.56 2.57
4516 4881 7.974675 AGATGAACTACATACGGAACAAAATG 58.025 34.615 0.00 0.00 39.56 2.32
4517 4882 9.314321 CTAGATGAACTACATACGGAACAAAAT 57.686 33.333 0.00 0.00 39.56 1.82
4518 4883 8.308931 ACTAGATGAACTACATACGGAACAAAA 58.691 33.333 0.00 0.00 39.56 2.44
4519 4884 7.758076 CACTAGATGAACTACATACGGAACAAA 59.242 37.037 0.00 0.00 39.56 2.83
4520 4885 7.255569 CACTAGATGAACTACATACGGAACAA 58.744 38.462 0.00 0.00 39.56 2.83
4521 4886 6.183360 CCACTAGATGAACTACATACGGAACA 60.183 42.308 0.00 0.00 39.56 3.18
4522 4887 6.039047 TCCACTAGATGAACTACATACGGAAC 59.961 42.308 0.00 0.00 39.56 3.62
4523 4888 6.124340 TCCACTAGATGAACTACATACGGAA 58.876 40.000 0.00 0.00 39.56 4.30
4524 4889 5.687780 TCCACTAGATGAACTACATACGGA 58.312 41.667 0.00 0.00 39.56 4.69
4525 4890 6.387041 TTCCACTAGATGAACTACATACGG 57.613 41.667 0.00 0.00 39.56 4.02
4526 4891 7.877003 AGATTCCACTAGATGAACTACATACG 58.123 38.462 0.00 0.00 39.56 3.06
4530 4895 9.475620 TCTAAAGATTCCACTAGATGAACTACA 57.524 33.333 0.00 0.00 0.00 2.74
4531 4896 9.959749 CTCTAAAGATTCCACTAGATGAACTAC 57.040 37.037 0.00 0.00 0.00 2.73
4532 4897 9.922477 TCTCTAAAGATTCCACTAGATGAACTA 57.078 33.333 0.00 0.00 0.00 2.24
4533 4898 8.830915 TCTCTAAAGATTCCACTAGATGAACT 57.169 34.615 0.00 0.00 0.00 3.01
4534 4899 8.908903 TCTCTCTAAAGATTCCACTAGATGAAC 58.091 37.037 0.00 0.00 0.00 3.18
4535 4900 8.908903 GTCTCTCTAAAGATTCCACTAGATGAA 58.091 37.037 0.00 0.00 0.00 2.57
4536 4901 8.278639 AGTCTCTCTAAAGATTCCACTAGATGA 58.721 37.037 0.00 0.00 0.00 2.92
4537 4902 8.463930 AGTCTCTCTAAAGATTCCACTAGATG 57.536 38.462 0.00 0.00 0.00 2.90
4552 4917 9.857656 TCCGTTCCTAAATATAAGTCTCTCTAA 57.142 33.333 0.00 0.00 0.00 2.10
4553 4918 9.504708 CTCCGTTCCTAAATATAAGTCTCTCTA 57.495 37.037 0.00 0.00 0.00 2.43
4554 4919 7.449086 CCTCCGTTCCTAAATATAAGTCTCTCT 59.551 40.741 0.00 0.00 0.00 3.10
4555 4920 7.309316 CCCTCCGTTCCTAAATATAAGTCTCTC 60.309 44.444 0.00 0.00 0.00 3.20
4556 4921 6.494146 CCCTCCGTTCCTAAATATAAGTCTCT 59.506 42.308 0.00 0.00 0.00 3.10
4557 4922 6.492772 TCCCTCCGTTCCTAAATATAAGTCTC 59.507 42.308 0.00 0.00 0.00 3.36
4558 4923 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
4559 4924 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
4560 4925 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
4561 4926 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
4562 4927 7.300658 ACTACTCCCTCCGTTCCTAAATATAA 58.699 38.462 0.00 0.00 0.00 0.98
4563 4928 6.856757 ACTACTCCCTCCGTTCCTAAATATA 58.143 40.000 0.00 0.00 0.00 0.86
4564 4929 5.713807 ACTACTCCCTCCGTTCCTAAATAT 58.286 41.667 0.00 0.00 0.00 1.28
4565 4930 5.134725 ACTACTCCCTCCGTTCCTAAATA 57.865 43.478 0.00 0.00 0.00 1.40
4566 4931 3.991683 ACTACTCCCTCCGTTCCTAAAT 58.008 45.455 0.00 0.00 0.00 1.40
4567 4932 3.463048 ACTACTCCCTCCGTTCCTAAA 57.537 47.619 0.00 0.00 0.00 1.85
4568 4933 4.591321 TTACTACTCCCTCCGTTCCTAA 57.409 45.455 0.00 0.00 0.00 2.69
4569 4934 4.803329 ATTACTACTCCCTCCGTTCCTA 57.197 45.455 0.00 0.00 0.00 2.94
4570 4935 3.684408 ATTACTACTCCCTCCGTTCCT 57.316 47.619 0.00 0.00 0.00 3.36
4571 4936 5.537674 TCATAATTACTACTCCCTCCGTTCC 59.462 44.000 0.00 0.00 0.00 3.62
4572 4937 6.264970 ACTCATAATTACTACTCCCTCCGTTC 59.735 42.308 0.00 0.00 0.00 3.95
4573 4938 6.134754 ACTCATAATTACTACTCCCTCCGTT 58.865 40.000 0.00 0.00 0.00 4.44
4574 4939 5.703310 ACTCATAATTACTACTCCCTCCGT 58.297 41.667 0.00 0.00 0.00 4.69
4575 4940 6.264744 TGAACTCATAATTACTACTCCCTCCG 59.735 42.308 0.00 0.00 0.00 4.63
4576 4941 7.598759 TGAACTCATAATTACTACTCCCTCC 57.401 40.000 0.00 0.00 0.00 4.30
4577 4942 9.482627 CAATGAACTCATAATTACTACTCCCTC 57.517 37.037 0.00 0.00 35.10 4.30
4578 4943 8.993424 ACAATGAACTCATAATTACTACTCCCT 58.007 33.333 0.00 0.00 35.10 4.20
4579 4944 9.046296 CACAATGAACTCATAATTACTACTCCC 57.954 37.037 0.00 0.00 35.10 4.30
4580 4945 8.552034 GCACAATGAACTCATAATTACTACTCC 58.448 37.037 0.00 0.00 35.10 3.85
4581 4946 9.098355 TGCACAATGAACTCATAATTACTACTC 57.902 33.333 0.00 0.00 35.10 2.59
4582 4947 9.102757 CTGCACAATGAACTCATAATTACTACT 57.897 33.333 0.00 0.00 35.10 2.57
4583 4948 7.852945 GCTGCACAATGAACTCATAATTACTAC 59.147 37.037 0.00 0.00 35.10 2.73
4596 4961 5.345702 ACATGATTATGCTGCACAATGAAC 58.654 37.500 11.37 0.00 37.85 3.18
4599 4964 4.927422 TGACATGATTATGCTGCACAATG 58.073 39.130 11.37 9.95 37.85 2.82
4618 4983 9.060347 TCAGATTAAAGAAATGATGCCTATGAC 57.940 33.333 0.00 0.00 0.00 3.06
4624 4989 8.627403 TCATTCTCAGATTAAAGAAATGATGCC 58.373 33.333 0.00 0.00 35.29 4.40
4638 5003 7.709613 GGCTTAAATTTGCATCATTCTCAGATT 59.290 33.333 0.00 0.00 0.00 2.40
4641 5006 6.334989 TGGCTTAAATTTGCATCATTCTCAG 58.665 36.000 0.00 0.00 0.00 3.35
4662 5027 9.379791 AGTAGTACTAGAACATTTTTACATGGC 57.620 33.333 1.87 0.00 0.00 4.40
4681 5046 7.864882 GGGTTTTCGAAGGACATATAGTAGTAC 59.135 40.741 13.53 0.00 0.00 2.73
4682 5047 7.781693 AGGGTTTTCGAAGGACATATAGTAGTA 59.218 37.037 13.53 0.00 0.00 1.82
4759 5146 8.477256 GGAGTTTTATCCATCCAAAATTCATGA 58.523 33.333 0.00 0.00 39.34 3.07
4760 5147 7.712205 GGGAGTTTTATCCATCCAAAATTCATG 59.288 37.037 0.00 0.00 41.52 3.07
4761 5148 7.147497 GGGGAGTTTTATCCATCCAAAATTCAT 60.147 37.037 0.00 0.00 41.52 2.57
4762 5149 6.156083 GGGGAGTTTTATCCATCCAAAATTCA 59.844 38.462 0.00 0.00 41.52 2.57
4763 5150 6.156083 TGGGGAGTTTTATCCATCCAAAATTC 59.844 38.462 0.00 0.00 41.52 2.17
4764 5151 6.028780 TGGGGAGTTTTATCCATCCAAAATT 58.971 36.000 0.00 0.00 41.52 1.82
4765 5152 5.425217 GTGGGGAGTTTTATCCATCCAAAAT 59.575 40.000 0.00 0.00 41.52 1.82
4777 5164 7.562088 AGAGTTAATTTTGTGTGGGGAGTTTTA 59.438 33.333 0.00 0.00 0.00 1.52
4873 5261 2.599408 TGAGACGGAGGGAGTAGTTT 57.401 50.000 0.00 0.00 0.00 2.66
4879 5267 6.814146 GCTTTTATATTATGAGACGGAGGGAG 59.186 42.308 0.00 0.00 0.00 4.30
4880 5268 6.497259 AGCTTTTATATTATGAGACGGAGGGA 59.503 38.462 0.00 0.00 0.00 4.20
4881 5269 6.702329 AGCTTTTATATTATGAGACGGAGGG 58.298 40.000 0.00 0.00 0.00 4.30
4882 5270 8.608844 AAAGCTTTTATATTATGAGACGGAGG 57.391 34.615 5.69 0.00 0.00 4.30
4923 5311 9.967451 TCCCATAATATAAGAGTGTTTTTGACA 57.033 29.630 0.00 0.00 35.42 3.58
4925 5313 9.104965 CGTCCCATAATATAAGAGTGTTTTTGA 57.895 33.333 0.00 0.00 0.00 2.69
4926 5314 8.342634 CCGTCCCATAATATAAGAGTGTTTTTG 58.657 37.037 0.00 0.00 0.00 2.44
4927 5315 8.269317 TCCGTCCCATAATATAAGAGTGTTTTT 58.731 33.333 0.00 0.00 0.00 1.94
4928 5316 7.798071 TCCGTCCCATAATATAAGAGTGTTTT 58.202 34.615 0.00 0.00 0.00 2.43
4929 5317 7.369551 TCCGTCCCATAATATAAGAGTGTTT 57.630 36.000 0.00 0.00 0.00 2.83
4930 5318 6.014499 CCTCCGTCCCATAATATAAGAGTGTT 60.014 42.308 0.00 0.00 0.00 3.32
4931 5319 5.480772 CCTCCGTCCCATAATATAAGAGTGT 59.519 44.000 0.00 0.00 0.00 3.55
4932 5320 5.105310 CCCTCCGTCCCATAATATAAGAGTG 60.105 48.000 0.00 0.00 0.00 3.51
4933 5321 5.024118 CCCTCCGTCCCATAATATAAGAGT 58.976 45.833 0.00 0.00 0.00 3.24
4934 5322 5.269991 TCCCTCCGTCCCATAATATAAGAG 58.730 45.833 0.00 0.00 0.00 2.85
4935 5323 5.222484 ACTCCCTCCGTCCCATAATATAAGA 60.222 44.000 0.00 0.00 0.00 2.10
4936 5324 5.024118 ACTCCCTCCGTCCCATAATATAAG 58.976 45.833 0.00 0.00 0.00 1.73
4937 5325 5.019657 ACTCCCTCCGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
4938 5326 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
4939 5327 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
4940 5328 3.400322 ACTACTCCCTCCGTCCCATAATA 59.600 47.826 0.00 0.00 0.00 0.98
4941 5329 2.179424 ACTACTCCCTCCGTCCCATAAT 59.821 50.000 0.00 0.00 0.00 1.28
4942 5330 1.572415 ACTACTCCCTCCGTCCCATAA 59.428 52.381 0.00 0.00 0.00 1.90
4943 5331 1.229131 ACTACTCCCTCCGTCCCATA 58.771 55.000 0.00 0.00 0.00 2.74
4944 5332 1.133544 GTACTACTCCCTCCGTCCCAT 60.134 57.143 0.00 0.00 0.00 4.00
4945 5333 0.257039 GTACTACTCCCTCCGTCCCA 59.743 60.000 0.00 0.00 0.00 4.37
4946 5334 0.467106 GGTACTACTCCCTCCGTCCC 60.467 65.000 0.00 0.00 0.00 4.46
4947 5335 0.550432 AGGTACTACTCCCTCCGTCC 59.450 60.000 0.00 0.00 36.02 4.79
4948 5336 2.810032 GCTAGGTACTACTCCCTCCGTC 60.810 59.091 0.00 0.00 41.75 4.79
4949 5337 1.142667 GCTAGGTACTACTCCCTCCGT 59.857 57.143 0.00 0.00 41.75 4.69
4950 5338 1.545204 GGCTAGGTACTACTCCCTCCG 60.545 61.905 0.00 0.00 41.75 4.63
4951 5339 1.782140 AGGCTAGGTACTACTCCCTCC 59.218 57.143 0.00 0.00 41.75 4.30
4952 5340 3.489355 GAAGGCTAGGTACTACTCCCTC 58.511 54.545 0.00 0.00 41.75 4.30
4953 5341 2.177451 GGAAGGCTAGGTACTACTCCCT 59.823 54.545 0.00 0.00 41.75 4.20
4954 5342 2.091444 TGGAAGGCTAGGTACTACTCCC 60.091 54.545 0.00 0.00 41.75 4.30
4955 5343 3.309600 TGGAAGGCTAGGTACTACTCC 57.690 52.381 0.00 0.00 41.75 3.85
4956 5344 6.973460 TTATTGGAAGGCTAGGTACTACTC 57.027 41.667 0.00 0.00 41.75 2.59
4957 5345 9.617053 AATATTATTGGAAGGCTAGGTACTACT 57.383 33.333 0.00 0.00 41.75 2.57
4960 5348 9.047947 CCTAATATTATTGGAAGGCTAGGTACT 57.952 37.037 1.63 0.00 46.37 2.73
5022 5412 6.586082 GGTTTGAACTGCAGGTGTATTATTTG 59.414 38.462 19.93 0.00 0.00 2.32
5031 5421 1.972872 AGAGGTTTGAACTGCAGGTG 58.027 50.000 19.93 0.00 0.00 4.00
5083 5473 2.779755 TAGATCGTTTGGTGCCACAT 57.220 45.000 0.00 0.00 0.00 3.21
5084 5474 2.779755 ATAGATCGTTTGGTGCCACA 57.220 45.000 0.00 0.00 0.00 4.17
5086 5476 4.935205 GCATATATAGATCGTTTGGTGCCA 59.065 41.667 0.00 0.00 0.00 4.92
5088 5478 4.935205 TGGCATATATAGATCGTTTGGTGC 59.065 41.667 5.08 5.08 0.00 5.01
5109 5500 7.647715 AGTTCGACATTAACTTTGTTTGATTGG 59.352 33.333 0.00 0.00 33.39 3.16
5178 5569 9.862371 TCAAACTTTGCAGTAATTAACTTGAAA 57.138 25.926 0.00 0.00 35.76 2.69
5180 5571 9.677567 GATCAAACTTTGCAGTAATTAACTTGA 57.322 29.630 0.00 0.00 35.76 3.02
5181 5572 9.462174 TGATCAAACTTTGCAGTAATTAACTTG 57.538 29.630 0.00 0.00 35.76 3.16
5183 5574 9.463443 GTTGATCAAACTTTGCAGTAATTAACT 57.537 29.630 10.35 0.00 35.75 2.24
5227 5618 9.893305 GCTGAAATTTTGTATTGTACTAGTTGT 57.107 29.630 0.00 0.00 0.00 3.32
5228 5619 9.891828 TGCTGAAATTTTGTATTGTACTAGTTG 57.108 29.630 0.00 0.00 0.00 3.16
5257 5648 8.598041 TGGTGGTATTTATGGCATTTAGTTTTT 58.402 29.630 4.78 0.00 0.00 1.94
5258 5649 8.038351 GTGGTGGTATTTATGGCATTTAGTTTT 58.962 33.333 4.78 0.00 0.00 2.43
5259 5650 7.398904 AGTGGTGGTATTTATGGCATTTAGTTT 59.601 33.333 4.78 0.00 0.00 2.66
5260 5651 6.895204 AGTGGTGGTATTTATGGCATTTAGTT 59.105 34.615 4.78 0.00 0.00 2.24
5261 5652 6.431722 AGTGGTGGTATTTATGGCATTTAGT 58.568 36.000 4.78 0.00 0.00 2.24
5262 5653 6.959639 AGTGGTGGTATTTATGGCATTTAG 57.040 37.500 4.78 0.00 0.00 1.85
5263 5654 7.389330 CGATAGTGGTGGTATTTATGGCATTTA 59.611 37.037 4.78 0.00 0.00 1.40
5264 5655 6.206634 CGATAGTGGTGGTATTTATGGCATTT 59.793 38.462 4.78 0.00 0.00 2.32
5265 5656 5.705441 CGATAGTGGTGGTATTTATGGCATT 59.295 40.000 4.78 0.00 0.00 3.56
5266 5657 5.245531 CGATAGTGGTGGTATTTATGGCAT 58.754 41.667 4.88 4.88 0.00 4.40
5267 5658 4.637276 CGATAGTGGTGGTATTTATGGCA 58.363 43.478 0.00 0.00 0.00 4.92
5268 5659 3.435671 GCGATAGTGGTGGTATTTATGGC 59.564 47.826 0.00 0.00 39.35 4.40
5269 5660 4.894784 AGCGATAGTGGTGGTATTTATGG 58.105 43.478 0.00 0.00 39.35 2.74
5270 5661 5.538118 TGAGCGATAGTGGTGGTATTTATG 58.462 41.667 0.00 0.00 39.35 1.90
5271 5662 5.801531 TGAGCGATAGTGGTGGTATTTAT 57.198 39.130 0.00 0.00 39.35 1.40
5272 5663 5.601583 TTGAGCGATAGTGGTGGTATTTA 57.398 39.130 0.00 0.00 39.35 1.40
5273 5664 4.481368 TTGAGCGATAGTGGTGGTATTT 57.519 40.909 0.00 0.00 39.35 1.40
5274 5665 4.189231 GTTTGAGCGATAGTGGTGGTATT 58.811 43.478 0.00 0.00 39.35 1.89
5275 5666 3.431766 GGTTTGAGCGATAGTGGTGGTAT 60.432 47.826 0.00 0.00 39.35 2.73
5276 5667 2.093869 GGTTTGAGCGATAGTGGTGGTA 60.094 50.000 0.00 0.00 39.35 3.25
5277 5668 1.338769 GGTTTGAGCGATAGTGGTGGT 60.339 52.381 0.00 0.00 39.35 4.16
5278 5669 1.369625 GGTTTGAGCGATAGTGGTGG 58.630 55.000 0.00 0.00 39.35 4.61
5279 5670 1.369625 GGGTTTGAGCGATAGTGGTG 58.630 55.000 0.00 0.00 39.35 4.17
5280 5671 0.252197 GGGGTTTGAGCGATAGTGGT 59.748 55.000 0.00 0.00 39.35 4.16
5281 5672 0.251916 TGGGGTTTGAGCGATAGTGG 59.748 55.000 0.00 0.00 39.35 4.00
5282 5673 2.107950 TTGGGGTTTGAGCGATAGTG 57.892 50.000 0.00 0.00 39.35 2.74
5283 5674 2.817844 GTTTTGGGGTTTGAGCGATAGT 59.182 45.455 0.00 0.00 39.35 2.12
5284 5675 3.487563 GTTTTGGGGTTTGAGCGATAG 57.512 47.619 0.00 0.00 0.00 2.08


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.