Multiple sequence alignment - TraesCS7B01G282300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G282300 chr7B 100.000 7446 0 0 1 7446 516485036 516477591 0.000000e+00 13751
1 TraesCS7B01G282300 chr7D 96.392 3963 86 25 2224 6165 488049791 488045865 0.000000e+00 6473
2 TraesCS7B01G282300 chr7D 96.549 1362 23 8 795 2132 488051165 488049804 0.000000e+00 2233
3 TraesCS7B01G282300 chr7D 96.460 791 24 3 1 789 376952722 376953510 0.000000e+00 1303
4 TraesCS7B01G282300 chr7D 88.260 477 49 3 6198 6674 488045791 488045322 1.400000e-156 564
5 TraesCS7B01G282300 chr7D 94.382 89 5 0 2139 2227 506141457 506141369 3.620000e-28 137
6 TraesCS7B01G282300 chr7A 96.610 2065 63 4 2811 4871 555668935 555666874 0.000000e+00 3419
7 TraesCS7B01G282300 chr7A 95.143 1709 67 9 5028 6728 555666873 555665173 0.000000e+00 2682
8 TraesCS7B01G282300 chr7A 96.667 1140 31 7 795 1927 555670940 555669801 0.000000e+00 1888
9 TraesCS7B01G282300 chr7A 90.800 750 37 12 6722 7446 555665144 555664402 0.000000e+00 974
10 TraesCS7B01G282300 chr7A 92.439 529 29 6 2285 2813 555669509 555668992 0.000000e+00 745
11 TraesCS7B01G282300 chr7A 80.913 241 16 12 1915 2129 555669777 555669541 5.980000e-36 163
12 TraesCS7B01G282300 chr7A 80.861 209 36 4 6975 7179 706696363 706696571 2.150000e-35 161
13 TraesCS7B01G282300 chr3B 96.705 789 24 1 1 789 114599525 114598739 0.000000e+00 1312
14 TraesCS7B01G282300 chr3B 87.770 139 16 1 1692 1830 772440605 772440468 2.150000e-35 161
15 TraesCS7B01G282300 chr3B 92.553 94 7 0 2140 2233 686352327 686352234 1.300000e-27 135
16 TraesCS7B01G282300 chr3B 88.785 107 10 2 2141 2247 289714923 289714819 6.060000e-26 130
17 TraesCS7B01G282300 chr2B 96.705 789 24 1 1 789 252398774 252397988 0.000000e+00 1312
18 TraesCS7B01G282300 chr6A 96.578 789 25 1 1 789 171847722 171848508 0.000000e+00 1306
19 TraesCS7B01G282300 chr5A 96.578 789 25 1 1 789 374881629 374882415 0.000000e+00 1306
20 TraesCS7B01G282300 chr5A 96.451 789 26 1 1 789 226950919 226950133 0.000000e+00 1301
21 TraesCS7B01G282300 chr5B 96.578 789 24 2 1 789 613628317 613629102 0.000000e+00 1304
22 TraesCS7B01G282300 chrUn 96.329 790 25 3 1 789 91454315 91453529 0.000000e+00 1295
23 TraesCS7B01G282300 chrUn 94.444 90 4 1 2143 2232 62663486 62663398 3.620000e-28 137
24 TraesCS7B01G282300 chr6B 96.324 789 27 1 1 789 567566719 567565933 0.000000e+00 1295
25 TraesCS7B01G282300 chr1B 96.552 87 3 0 2141 2227 631232675 631232761 2.170000e-30 145
26 TraesCS7B01G282300 chr1B 94.565 92 5 0 2142 2233 327340591 327340500 7.790000e-30 143
27 TraesCS7B01G282300 chr1B 93.333 90 6 0 2139 2228 33839317 33839406 4.690000e-27 134
28 TraesCS7B01G282300 chr5D 93.407 91 6 0 2143 2233 367998171 367998081 1.300000e-27 135
29 TraesCS7B01G282300 chr4D 91.667 96 8 0 2140 2235 322674851 322674946 4.690000e-27 134


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G282300 chr7B 516477591 516485036 7445 True 13751.000000 13751 100.000000 1 7446 1 chr7B.!!$R1 7445
1 TraesCS7B01G282300 chr7D 488045322 488051165 5843 True 3090.000000 6473 93.733667 795 6674 3 chr7D.!!$R2 5879
2 TraesCS7B01G282300 chr7D 376952722 376953510 788 False 1303.000000 1303 96.460000 1 789 1 chr7D.!!$F1 788
3 TraesCS7B01G282300 chr7A 555664402 555670940 6538 True 1645.166667 3419 92.095333 795 7446 6 chr7A.!!$R1 6651
4 TraesCS7B01G282300 chr3B 114598739 114599525 786 True 1312.000000 1312 96.705000 1 789 1 chr3B.!!$R1 788
5 TraesCS7B01G282300 chr2B 252397988 252398774 786 True 1312.000000 1312 96.705000 1 789 1 chr2B.!!$R1 788
6 TraesCS7B01G282300 chr6A 171847722 171848508 786 False 1306.000000 1306 96.578000 1 789 1 chr6A.!!$F1 788
7 TraesCS7B01G282300 chr5A 374881629 374882415 786 False 1306.000000 1306 96.578000 1 789 1 chr5A.!!$F1 788
8 TraesCS7B01G282300 chr5A 226950133 226950919 786 True 1301.000000 1301 96.451000 1 789 1 chr5A.!!$R1 788
9 TraesCS7B01G282300 chr5B 613628317 613629102 785 False 1304.000000 1304 96.578000 1 789 1 chr5B.!!$F1 788
10 TraesCS7B01G282300 chrUn 91453529 91454315 786 True 1295.000000 1295 96.329000 1 789 1 chrUn.!!$R2 788
11 TraesCS7B01G282300 chr6B 567565933 567566719 786 True 1295.000000 1295 96.324000 1 789 1 chr6B.!!$R1 788

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
542 543 0.179187 CTCGTCGACGTGATTCAGCT 60.179 55.000 34.40 0.00 40.80 4.24 F
733 736 1.072489 TCTAACGGTCCATGCAAACCA 59.928 47.619 14.44 0.00 35.13 3.67 F
1661 1669 1.672356 GCCCATGTCACTCGTGCTT 60.672 57.895 0.00 0.00 0.00 3.91 F
2154 2222 0.106819 TGCCTACTACTCCCTCCGTC 60.107 60.000 0.00 0.00 0.00 4.79 F
2156 2224 0.178995 CCTACTACTCCCTCCGTCCC 60.179 65.000 0.00 0.00 0.00 4.46 F
2157 2225 0.549950 CTACTACTCCCTCCGTCCCA 59.450 60.000 0.00 0.00 0.00 4.37 F
2941 3075 1.001764 AGTAGCTTGGCTGCATGCA 60.002 52.632 21.29 21.29 43.48 3.96 F
3975 4110 1.143889 CTTGGAGAAGGCTATTCCCCC 59.856 57.143 12.99 2.53 34.51 5.40 F
4941 5079 0.824109 TTGTATGAGTCCCTCCAGCG 59.176 55.000 0.00 0.00 0.00 5.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2135 2203 0.106819 GACGGAGGGAGTAGTAGGCA 60.107 60.000 0.00 0.0 0.00 4.75 R
2137 2205 0.178995 GGGACGGAGGGAGTAGTAGG 60.179 65.000 0.00 0.0 0.00 3.18 R
2755 2830 0.613260 TTGCTCGTCAGGCCTGTTAT 59.387 50.000 31.58 0.0 0.00 1.89 R
3943 4078 2.281484 TCCAAGCACCCGAACTGC 60.281 61.111 0.00 0.0 34.63 4.40 R
3975 4110 6.023357 ACAGTCATATCCTCTTCATCATCG 57.977 41.667 0.00 0.0 0.00 3.84 R
4445 4580 5.156355 CCTGTGTACAAATAAAGCAGCAAG 58.844 41.667 0.00 0.0 0.00 4.01 R
4456 4591 3.758554 GGATCTGCAACCTGTGTACAAAT 59.241 43.478 0.00 0.0 0.00 2.32 R
5875 6014 1.361204 TGCCCTTGTCAAGAGGATCA 58.639 50.000 14.42 5.5 37.82 2.92 R
6727 6923 0.465287 CCAAATGGGCCCTTATGCAC 59.535 55.000 25.70 0.0 34.38 4.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 3.603158 AACGGTTGTTGGAAAAAGCTT 57.397 38.095 0.00 0.00 36.81 3.74
161 162 4.644685 ACCGGCATAGATTTTTGCTACAAT 59.355 37.500 0.00 0.00 38.88 2.71
283 284 6.282930 GGCATAATGTTTTGCTACATCCATT 58.717 36.000 7.84 0.00 37.76 3.16
458 459 1.925285 AATCCATGGCGGCAAGGAGA 61.925 55.000 34.35 20.56 32.91 3.71
461 462 1.153107 CATGGCGGCAAGGAGATCA 60.153 57.895 18.31 0.00 0.00 2.92
462 463 0.536687 CATGGCGGCAAGGAGATCAT 60.537 55.000 18.31 0.00 0.00 2.45
493 494 8.124823 CGTATGTAAGACATGATTGAAGCAATT 58.875 33.333 0.00 0.00 39.53 2.32
539 540 1.504900 CCCTCGTCGACGTGATTCA 59.495 57.895 34.13 16.66 40.80 2.57
542 543 0.179187 CTCGTCGACGTGATTCAGCT 60.179 55.000 34.40 0.00 40.80 4.24
550 551 1.817099 GTGATTCAGCTGCGGGGAG 60.817 63.158 9.47 0.00 0.00 4.30
698 701 2.701587 CAACGGTTGCTTCAGTCCA 58.298 52.632 8.09 0.00 0.00 4.02
733 736 1.072489 TCTAACGGTCCATGCAAACCA 59.928 47.619 14.44 0.00 35.13 3.67
744 747 1.964373 GCAAACCACATCGGACGGT 60.964 57.895 0.00 0.00 38.63 4.83
824 829 2.383527 CGCAGTTTCACCGCTCCTC 61.384 63.158 0.00 0.00 0.00 3.71
842 848 2.899505 GCTCCTGTCTCCTGAGCC 59.100 66.667 0.00 0.00 44.45 4.70
927 934 4.892965 TTTGCCCCGCTGTGCTGT 62.893 61.111 0.00 0.00 0.00 4.40
1286 1294 2.235650 GGACAAGAAGTACTACCCCACC 59.764 54.545 0.00 0.00 0.00 4.61
1661 1669 1.672356 GCCCATGTCACTCGTGCTT 60.672 57.895 0.00 0.00 0.00 3.91
1808 1816 2.172505 TGAGGGCGTCATGGTAATTCAT 59.827 45.455 5.66 0.00 0.00 2.57
1837 1845 7.739825 TCCTATTGCTTTATACATCTCTGCTT 58.260 34.615 0.00 0.00 0.00 3.91
1861 1869 8.698973 TTAATTGATGGGTTGAACTCTGTTTA 57.301 30.769 0.00 0.00 0.00 2.01
1996 2039 7.661437 ACATCTTTACAGCTTCACAAGTTCATA 59.339 33.333 0.00 0.00 0.00 2.15
1997 2040 8.506437 CATCTTTACAGCTTCACAAGTTCATAA 58.494 33.333 0.00 0.00 0.00 1.90
1998 2041 8.621532 TCTTTACAGCTTCACAAGTTCATAAT 57.378 30.769 0.00 0.00 0.00 1.28
1999 2042 9.066892 TCTTTACAGCTTCACAAGTTCATAATT 57.933 29.630 0.00 0.00 0.00 1.40
2000 2043 9.334693 CTTTACAGCTTCACAAGTTCATAATTC 57.665 33.333 0.00 0.00 0.00 2.17
2001 2044 6.882610 ACAGCTTCACAAGTTCATAATTCA 57.117 33.333 0.00 0.00 0.00 2.57
2002 2045 6.906659 ACAGCTTCACAAGTTCATAATTCAG 58.093 36.000 0.00 0.00 0.00 3.02
2003 2046 6.072286 ACAGCTTCACAAGTTCATAATTCAGG 60.072 38.462 0.00 0.00 0.00 3.86
2004 2047 6.149973 CAGCTTCACAAGTTCATAATTCAGGA 59.850 38.462 0.00 0.00 0.00 3.86
2005 2048 6.373774 AGCTTCACAAGTTCATAATTCAGGAG 59.626 38.462 0.00 0.00 0.00 3.69
2132 2200 3.904479 GGCTTATGCAAGGCGGCC 61.904 66.667 12.11 12.11 46.08 6.13
2133 2201 2.830370 GCTTATGCAAGGCGGCCT 60.830 61.111 17.69 17.69 39.41 5.19
2134 2202 2.418083 GCTTATGCAAGGCGGCCTT 61.418 57.895 28.12 28.12 45.88 4.35
2135 2203 1.948721 GCTTATGCAAGGCGGCCTTT 61.949 55.000 30.92 19.43 41.69 3.11
2136 2204 0.179129 CTTATGCAAGGCGGCCTTTG 60.179 55.000 30.92 24.49 41.69 2.77
2137 2205 2.224495 TTATGCAAGGCGGCCTTTGC 62.224 55.000 31.53 31.53 41.69 3.68
2148 2216 3.782632 GCCTTTGCCTACTACTCCC 57.217 57.895 0.00 0.00 0.00 4.30
2149 2217 1.205055 GCCTTTGCCTACTACTCCCT 58.795 55.000 0.00 0.00 0.00 4.20
2150 2218 1.139256 GCCTTTGCCTACTACTCCCTC 59.861 57.143 0.00 0.00 0.00 4.30
2151 2219 1.763545 CCTTTGCCTACTACTCCCTCC 59.236 57.143 0.00 0.00 0.00 4.30
2152 2220 1.409427 CTTTGCCTACTACTCCCTCCG 59.591 57.143 0.00 0.00 0.00 4.63
2153 2221 0.333993 TTGCCTACTACTCCCTCCGT 59.666 55.000 0.00 0.00 0.00 4.69
2154 2222 0.106819 TGCCTACTACTCCCTCCGTC 60.107 60.000 0.00 0.00 0.00 4.79
2155 2223 0.822944 GCCTACTACTCCCTCCGTCC 60.823 65.000 0.00 0.00 0.00 4.79
2156 2224 0.178995 CCTACTACTCCCTCCGTCCC 60.179 65.000 0.00 0.00 0.00 4.46
2157 2225 0.549950 CTACTACTCCCTCCGTCCCA 59.450 60.000 0.00 0.00 0.00 4.37
2158 2226 1.145325 CTACTACTCCCTCCGTCCCAT 59.855 57.143 0.00 0.00 0.00 4.00
2159 2227 1.229131 ACTACTCCCTCCGTCCCATA 58.771 55.000 0.00 0.00 0.00 2.74
2160 2228 1.572415 ACTACTCCCTCCGTCCCATAA 59.428 52.381 0.00 0.00 0.00 1.90
2161 2229 2.179424 ACTACTCCCTCCGTCCCATAAT 59.821 50.000 0.00 0.00 0.00 1.28
2162 2230 1.424638 ACTCCCTCCGTCCCATAATG 58.575 55.000 0.00 0.00 0.00 1.90
2163 2231 1.344087 ACTCCCTCCGTCCCATAATGT 60.344 52.381 0.00 0.00 0.00 2.71
2164 2232 2.090943 ACTCCCTCCGTCCCATAATGTA 60.091 50.000 0.00 0.00 0.00 2.29
2165 2233 2.969950 CTCCCTCCGTCCCATAATGTAA 59.030 50.000 0.00 0.00 0.00 2.41
2166 2234 2.969950 TCCCTCCGTCCCATAATGTAAG 59.030 50.000 0.00 0.00 0.00 2.34
2167 2235 2.969950 CCCTCCGTCCCATAATGTAAGA 59.030 50.000 0.00 0.00 0.00 2.10
2168 2236 3.244112 CCCTCCGTCCCATAATGTAAGAC 60.244 52.174 0.00 0.00 0.00 3.01
2170 2238 3.025978 TCCGTCCCATAATGTAAGACGT 58.974 45.455 9.63 0.00 46.62 4.34
2171 2239 3.448301 TCCGTCCCATAATGTAAGACGTT 59.552 43.478 9.63 0.00 46.62 3.99
2172 2240 4.081531 TCCGTCCCATAATGTAAGACGTTT 60.082 41.667 9.63 0.00 46.62 3.60
2173 2241 4.632688 CCGTCCCATAATGTAAGACGTTTT 59.367 41.667 9.63 0.00 46.62 2.43
2174 2242 5.122711 CCGTCCCATAATGTAAGACGTTTTT 59.877 40.000 9.63 0.00 46.62 1.94
2196 2264 8.508883 TTTTTAGCACTGGTGTAGTCTAAAAA 57.491 30.769 19.89 19.89 44.10 1.94
2219 2287 3.720949 CGTCTTACATTATGGGACGGA 57.279 47.619 20.50 2.30 43.69 4.69
2220 2288 3.639538 CGTCTTACATTATGGGACGGAG 58.360 50.000 20.50 2.74 43.69 4.63
2221 2289 3.552273 CGTCTTACATTATGGGACGGAGG 60.552 52.174 20.50 5.87 43.69 4.30
2222 2290 2.969950 TCTTACATTATGGGACGGAGGG 59.030 50.000 0.00 0.00 0.00 4.30
2226 2294 2.090943 ACATTATGGGACGGAGGGAGTA 60.091 50.000 0.00 0.00 0.00 2.59
2253 2321 6.481434 AATAGACGTTTAAGCATCCTAGGT 57.519 37.500 9.08 0.00 0.00 3.08
2255 2323 3.514309 AGACGTTTAAGCATCCTAGGTGT 59.486 43.478 9.08 0.00 0.00 4.16
2508 2583 9.578576 TCTGAAGGCAAATAGATAATGCTTTAT 57.421 29.630 4.61 4.61 39.15 1.40
2733 2808 6.039616 GTGTTGTCTTAAAAATGGAGCACAA 58.960 36.000 0.00 0.00 0.00 3.33
2789 2864 3.376859 ACGAGCAAAACATCTGTTGTCAA 59.623 39.130 0.00 0.00 37.68 3.18
2822 2956 7.043325 CGTCTTGTATTAGCTAATGACCTTCAC 60.043 40.741 25.99 15.57 0.00 3.18
2883 3017 5.628130 ACATGCACCAGAAGCAGAATATAT 58.372 37.500 0.00 0.00 46.36 0.86
2941 3075 1.001764 AGTAGCTTGGCTGCATGCA 60.002 52.632 21.29 21.29 43.48 3.96
3839 3974 4.773674 TGCAATGAAGAAATGTGATTCCCT 59.226 37.500 0.00 0.00 0.00 4.20
3943 4078 2.350522 GCACAATACAGACTGGTCAGG 58.649 52.381 7.51 0.00 0.00 3.86
3975 4110 1.143889 CTTGGAGAAGGCTATTCCCCC 59.856 57.143 12.99 2.53 34.51 5.40
4418 4553 9.807649 ATAAATCAATGCACTTGGTCTATTTTC 57.192 29.630 0.00 0.00 35.43 2.29
4456 4591 5.469479 GCAGATTTTTACCTTGCTGCTTTA 58.531 37.500 0.00 0.00 43.81 1.85
4728 4863 5.777732 AGAAGATATAGAGAATGGCCTCGTT 59.222 40.000 3.32 0.00 38.19 3.85
4941 5079 0.824109 TTGTATGAGTCCCTCCAGCG 59.176 55.000 0.00 0.00 0.00 5.18
5016 5154 1.462283 CAGCAGACCATCAGTTCGTTG 59.538 52.381 0.00 0.00 0.00 4.10
5374 5512 1.119684 GTGGCCAAATAATCCCCACC 58.880 55.000 7.24 0.00 39.95 4.61
5491 5629 9.988815 GGTTCTTGTACATAGACTAATCATCAT 57.011 33.333 0.00 0.00 0.00 2.45
5525 5663 6.127451 ACACGTGTATTTGATGACCTGATCTA 60.127 38.462 21.98 0.00 0.00 1.98
5600 5738 5.646793 GTCTGCTATATATACGGTCCTGTCA 59.353 44.000 0.00 0.00 0.00 3.58
5679 5817 3.067833 GTCAAGGTAAGAAGTGTGCTCC 58.932 50.000 0.00 0.00 0.00 4.70
5701 5839 5.133322 TCCATTTCTTCTGATCCAGCCTTAT 59.867 40.000 0.00 0.00 0.00 1.73
5749 5888 7.210174 TGTATGACTCTTGCTGATGGTATAAC 58.790 38.462 0.00 0.00 0.00 1.89
5875 6014 1.004745 CACTGGGCTATTGTTCCTGGT 59.995 52.381 0.00 0.00 0.00 4.00
5985 6124 4.115516 CGAAGGAAGGTGAGACATACATG 58.884 47.826 0.00 0.00 0.00 3.21
6156 6304 4.832248 TCCACCTGATGATGTAGTTTGAC 58.168 43.478 0.00 0.00 0.00 3.18
6261 6450 0.596083 TTTGCCGCGTTTTGATGGTG 60.596 50.000 4.92 0.00 0.00 4.17
6264 6453 2.265182 CCGCGTTTTGATGGTGGGT 61.265 57.895 4.92 0.00 0.00 4.51
6265 6454 0.956410 CCGCGTTTTGATGGTGGGTA 60.956 55.000 4.92 0.00 0.00 3.69
6266 6455 1.091537 CGCGTTTTGATGGTGGGTAT 58.908 50.000 0.00 0.00 0.00 2.73
6267 6456 1.470890 CGCGTTTTGATGGTGGGTATT 59.529 47.619 0.00 0.00 0.00 1.89
6268 6457 2.678836 CGCGTTTTGATGGTGGGTATTA 59.321 45.455 0.00 0.00 0.00 0.98
6269 6458 3.314080 CGCGTTTTGATGGTGGGTATTAT 59.686 43.478 0.00 0.00 0.00 1.28
6344 6539 4.407496 ACTATCGCTCTAACATCTACGC 57.593 45.455 0.00 0.00 0.00 4.42
6577 6772 3.196901 TGGATTACTGGACGTAATGTGCT 59.803 43.478 2.39 0.00 46.19 4.40
6608 6803 3.963428 ACTCTTGTGAGGTGGTGTATC 57.037 47.619 0.00 0.00 44.29 2.24
6616 6811 2.885266 TGAGGTGGTGTATCTCTATCGC 59.115 50.000 0.00 0.00 37.44 4.58
6633 6828 1.754226 TCGCTATGGTCATGCTGTGTA 59.246 47.619 0.00 0.00 0.00 2.90
6635 6830 3.133691 CGCTATGGTCATGCTGTGTAAT 58.866 45.455 0.00 0.00 0.00 1.89
6716 6912 0.919710 ATTCTGTTACTGCCCCCTCC 59.080 55.000 0.00 0.00 0.00 4.30
6719 6915 1.838073 CTGTTACTGCCCCCTCCGTT 61.838 60.000 0.00 0.00 0.00 4.44
6721 6917 2.295602 TTACTGCCCCCTCCGTTCC 61.296 63.158 0.00 0.00 0.00 3.62
6722 6918 3.549433 TACTGCCCCCTCCGTTCCA 62.549 63.158 0.00 0.00 0.00 3.53
6724 6920 2.041430 TGCCCCCTCCGTTCCATA 59.959 61.111 0.00 0.00 0.00 2.74
6725 6921 1.385347 TGCCCCCTCCGTTCCATAT 60.385 57.895 0.00 0.00 0.00 1.78
6726 6922 0.991355 TGCCCCCTCCGTTCCATATT 60.991 55.000 0.00 0.00 0.00 1.28
6727 6923 0.537371 GCCCCCTCCGTTCCATATTG 60.537 60.000 0.00 0.00 0.00 1.90
6752 6987 4.141505 GCATAAGGGCCCATTTGGTTTAAT 60.142 41.667 27.56 0.00 36.04 1.40
6753 6988 3.998913 AAGGGCCCATTTGGTTTAATG 57.001 42.857 27.56 0.00 35.70 1.90
6770 7005 2.368878 GGAGGGGGAATGGGAGCT 60.369 66.667 0.00 0.00 0.00 4.09
6771 7006 2.009302 GGAGGGGGAATGGGAGCTT 61.009 63.158 0.00 0.00 0.00 3.74
6772 7007 0.697854 GGAGGGGGAATGGGAGCTTA 60.698 60.000 0.00 0.00 0.00 3.09
6780 7015 3.140332 GGGAATGGGAGCTTATTAAGGGT 59.860 47.826 5.61 0.00 0.00 4.34
6830 7065 5.105310 GCTAGAGATTGGTAGTTTGAGTGGA 60.105 44.000 0.00 0.00 0.00 4.02
6840 7075 5.702209 GGTAGTTTGAGTGGAAACGGAAATA 59.298 40.000 0.00 0.00 40.20 1.40
6933 7189 3.134458 GGGAGTTAGCTATGTCACATGC 58.866 50.000 0.00 2.26 0.00 4.06
6950 7206 2.214376 TGCTTATTTGTCCACCCAGG 57.786 50.000 0.00 0.00 39.47 4.45
6955 7211 2.155197 ATTTGTCCACCCAGGCCCTC 62.155 60.000 0.00 0.00 37.29 4.30
6976 7233 6.521151 CTCCACAAGGAAAAGCTTCATATT 57.479 37.500 0.00 0.00 45.19 1.28
7127 7385 6.154877 ACACAAATGAATCAAATGCCTCCATA 59.845 34.615 0.00 0.00 0.00 2.74
7137 7395 1.153369 GCCTCCATAGTTGCGCTCA 60.153 57.895 9.73 0.00 0.00 4.26
7163 7421 7.764141 TGATCCTCTTTTTCATGTTGATCAA 57.236 32.000 3.38 3.38 35.67 2.57
7174 7432 3.988379 TGTTGATCAACCACTTCTTGC 57.012 42.857 30.66 7.20 40.46 4.01
7228 7488 4.202101 ACATGATCCGACTCTCTCAATGTC 60.202 45.833 0.00 0.00 0.00 3.06
7239 7499 0.994995 CTCAATGTCGTCGCCTTCTG 59.005 55.000 0.00 0.00 0.00 3.02
7270 7530 6.759827 ACCATTTTGCATATTTCTCTTGCATC 59.240 34.615 0.00 0.00 45.04 3.91
7300 7560 8.550710 AATCTTTTCTCTCTCTCAATGTTCAG 57.449 34.615 0.00 0.00 0.00 3.02
7322 7582 0.603569 TGTCTTTCACCCTCTCTCGC 59.396 55.000 0.00 0.00 0.00 5.03
7348 7608 2.579860 ACTCCATCCTCTTCCTTTGCAT 59.420 45.455 0.00 0.00 0.00 3.96
7352 7612 5.380043 TCCATCCTCTTCCTTTGCATATTC 58.620 41.667 0.00 0.00 0.00 1.75
7354 7614 5.773680 CCATCCTCTTCCTTTGCATATTCAT 59.226 40.000 0.00 0.00 0.00 2.57
7362 7622 5.195185 TCCTTTGCATATTCATGAAGAGCA 58.805 37.500 21.28 21.28 33.67 4.26
7397 7657 1.125093 TCTTCAACTCCTTGGCGGGA 61.125 55.000 0.00 0.00 0.00 5.14
7398 7658 0.250727 CTTCAACTCCTTGGCGGGAA 60.251 55.000 0.92 0.00 34.66 3.97
7426 7686 2.037772 ACCCGTCCATATGATGAAGAGC 59.962 50.000 3.65 0.00 31.07 4.09
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.630644 AGCTTTCTCTCTCAATGGTTGA 57.369 40.909 0.00 0.00 38.17 3.18
72 73 2.110213 AGCCGTCGCTGGTTGAAA 59.890 55.556 0.00 0.00 46.19 2.69
180 181 2.746269 AGCAAAACGTGACGCTAGTTA 58.254 42.857 4.25 0.00 31.60 2.24
283 284 2.501128 GGTCGCAGCTCAGCCATA 59.499 61.111 0.00 0.00 0.00 2.74
461 462 9.981114 TTCAATCATGTCTTACATACGTCATAT 57.019 29.630 0.00 0.00 36.53 1.78
462 463 9.463443 CTTCAATCATGTCTTACATACGTCATA 57.537 33.333 0.00 0.00 36.53 2.15
493 494 1.271840 ACCTATCAAGCCGCCTTGGA 61.272 55.000 6.26 0.00 46.69 3.53
539 540 2.731571 TTATTCGCTCCCCGCAGCT 61.732 57.895 0.00 0.00 37.25 4.24
542 543 1.153449 CTGTTATTCGCTCCCCGCA 60.153 57.895 0.00 0.00 39.08 5.69
550 551 2.329379 CTAGATCCGCCTGTTATTCGC 58.671 52.381 0.00 0.00 0.00 4.70
698 701 2.061773 GTTAGATCTGCGCGCATACAT 58.938 47.619 36.48 25.50 0.00 2.29
733 736 4.404098 GGCCCAACCGTCCGATGT 62.404 66.667 0.00 0.00 0.00 3.06
789 792 0.109132 GCGGTGATGAAAAAGGGCAG 60.109 55.000 0.00 0.00 0.00 4.85
790 793 0.825425 TGCGGTGATGAAAAAGGGCA 60.825 50.000 0.00 0.00 0.00 5.36
791 794 0.109132 CTGCGGTGATGAAAAAGGGC 60.109 55.000 0.00 0.00 0.00 5.19
792 795 1.247567 ACTGCGGTGATGAAAAAGGG 58.752 50.000 0.00 0.00 0.00 3.95
793 796 3.243367 TGAAACTGCGGTGATGAAAAAGG 60.243 43.478 0.00 0.00 0.00 3.11
824 829 2.493973 GCTCAGGAGACAGGAGCG 59.506 66.667 0.00 0.00 45.67 5.03
927 934 1.076192 GAAGAGGAGGGAGGCGGTA 60.076 63.158 0.00 0.00 0.00 4.02
990 997 2.608550 CGGGCTAGGGTTTTGGGGA 61.609 63.158 0.00 0.00 0.00 4.81
1286 1294 3.584052 CCGTAGACCTCCTCGGCG 61.584 72.222 0.00 0.00 36.68 6.46
1661 1669 1.299648 CTTGCCATTCCCCGACTCA 59.700 57.895 0.00 0.00 0.00 3.41
1808 1816 9.716531 CAGAGATGTATAAAGCAATAGGATCAA 57.283 33.333 0.00 0.00 0.00 2.57
1837 1845 7.942341 AGTAAACAGAGTTCAACCCATCAATTA 59.058 33.333 0.00 0.00 0.00 1.40
1932 1975 8.272545 TCTCTTGTCAAACTGAATTATGATGG 57.727 34.615 0.00 0.00 0.00 3.51
1996 2039 7.175641 CACTTCCAACAGAAATACTCCTGAATT 59.824 37.037 0.00 0.00 32.88 2.17
1997 2040 6.656693 CACTTCCAACAGAAATACTCCTGAAT 59.343 38.462 0.00 0.00 32.88 2.57
1998 2041 5.997746 CACTTCCAACAGAAATACTCCTGAA 59.002 40.000 0.00 0.00 32.88 3.02
1999 2042 5.513094 CCACTTCCAACAGAAATACTCCTGA 60.513 44.000 0.00 0.00 32.88 3.86
2000 2043 4.697352 CCACTTCCAACAGAAATACTCCTG 59.303 45.833 0.00 0.00 32.88 3.86
2001 2044 4.597507 TCCACTTCCAACAGAAATACTCCT 59.402 41.667 0.00 0.00 32.88 3.69
2002 2045 4.906618 TCCACTTCCAACAGAAATACTCC 58.093 43.478 0.00 0.00 32.88 3.85
2003 2046 8.561738 TTTATCCACTTCCAACAGAAATACTC 57.438 34.615 0.00 0.00 32.88 2.59
2004 2047 8.793592 GTTTTATCCACTTCCAACAGAAATACT 58.206 33.333 0.00 0.00 32.88 2.12
2005 2048 8.573035 TGTTTTATCCACTTCCAACAGAAATAC 58.427 33.333 0.00 0.00 32.88 1.89
2050 2115 2.198827 TGCTTGGGTAAGATGTGGTG 57.801 50.000 0.00 0.00 35.92 4.17
2132 2200 1.409427 CGGAGGGAGTAGTAGGCAAAG 59.591 57.143 0.00 0.00 0.00 2.77
2133 2201 1.272872 ACGGAGGGAGTAGTAGGCAAA 60.273 52.381 0.00 0.00 0.00 3.68
2134 2202 0.333993 ACGGAGGGAGTAGTAGGCAA 59.666 55.000 0.00 0.00 0.00 4.52
2135 2203 0.106819 GACGGAGGGAGTAGTAGGCA 60.107 60.000 0.00 0.00 0.00 4.75
2136 2204 0.822944 GGACGGAGGGAGTAGTAGGC 60.823 65.000 0.00 0.00 0.00 3.93
2137 2205 0.178995 GGGACGGAGGGAGTAGTAGG 60.179 65.000 0.00 0.00 0.00 3.18
2138 2206 0.549950 TGGGACGGAGGGAGTAGTAG 59.450 60.000 0.00 0.00 0.00 2.57
2140 2208 1.229131 TATGGGACGGAGGGAGTAGT 58.771 55.000 0.00 0.00 0.00 2.73
2142 2210 2.090943 ACATTATGGGACGGAGGGAGTA 60.091 50.000 0.00 0.00 0.00 2.59
2143 2211 1.344087 ACATTATGGGACGGAGGGAGT 60.344 52.381 0.00 0.00 0.00 3.85
2144 2212 1.424638 ACATTATGGGACGGAGGGAG 58.575 55.000 0.00 0.00 0.00 4.30
2145 2213 2.779429 TACATTATGGGACGGAGGGA 57.221 50.000 0.00 0.00 0.00 4.20
2146 2214 2.969950 TCTTACATTATGGGACGGAGGG 59.030 50.000 0.00 0.00 0.00 4.30
2147 2215 3.552273 CGTCTTACATTATGGGACGGAGG 60.552 52.174 20.50 5.87 43.69 4.30
2148 2216 3.639538 CGTCTTACATTATGGGACGGAG 58.360 50.000 20.50 2.74 43.69 4.63
2149 2217 3.720949 CGTCTTACATTATGGGACGGA 57.279 47.619 20.50 2.30 43.69 4.69
2171 2239 8.508883 TTTTTAGACTACACCAGTGCTAAAAA 57.491 30.769 19.08 19.08 43.48 1.94
2194 2262 5.122711 CCGTCCCATAATGTAAGACGTTTTT 59.877 40.000 9.63 0.00 46.62 1.94
2195 2263 4.632688 CCGTCCCATAATGTAAGACGTTTT 59.367 41.667 9.63 0.00 46.62 2.43
2196 2264 4.081531 TCCGTCCCATAATGTAAGACGTTT 60.082 41.667 9.63 0.00 46.62 3.60
2197 2265 3.448301 TCCGTCCCATAATGTAAGACGTT 59.552 43.478 9.63 0.00 46.62 3.99
2198 2266 3.025978 TCCGTCCCATAATGTAAGACGT 58.974 45.455 9.63 0.00 46.62 4.34
2200 2268 3.244112 CCCTCCGTCCCATAATGTAAGAC 60.244 52.174 0.00 0.00 0.00 3.01
2201 2269 2.969950 CCCTCCGTCCCATAATGTAAGA 59.030 50.000 0.00 0.00 0.00 2.10
2202 2270 2.969950 TCCCTCCGTCCCATAATGTAAG 59.030 50.000 0.00 0.00 0.00 2.34
2203 2271 2.969950 CTCCCTCCGTCCCATAATGTAA 59.030 50.000 0.00 0.00 0.00 2.41
2204 2272 2.090943 ACTCCCTCCGTCCCATAATGTA 60.091 50.000 0.00 0.00 0.00 2.29
2205 2273 1.344087 ACTCCCTCCGTCCCATAATGT 60.344 52.381 0.00 0.00 0.00 2.71
2206 2274 1.424638 ACTCCCTCCGTCCCATAATG 58.575 55.000 0.00 0.00 0.00 1.90
2207 2275 2.606378 GTACTCCCTCCGTCCCATAAT 58.394 52.381 0.00 0.00 0.00 1.28
2208 2276 1.412074 GGTACTCCCTCCGTCCCATAA 60.412 57.143 0.00 0.00 0.00 1.90
2209 2277 0.186873 GGTACTCCCTCCGTCCCATA 59.813 60.000 0.00 0.00 0.00 2.74
2210 2278 1.075450 GGTACTCCCTCCGTCCCAT 60.075 63.158 0.00 0.00 0.00 4.00
2211 2279 0.920763 TAGGTACTCCCTCCGTCCCA 60.921 60.000 0.00 0.00 44.81 4.37
2212 2280 0.259938 TTAGGTACTCCCTCCGTCCC 59.740 60.000 0.00 0.00 44.81 4.46
2213 2281 2.378378 ATTAGGTACTCCCTCCGTCC 57.622 55.000 0.00 0.00 44.81 4.79
2214 2282 4.071423 GTCTATTAGGTACTCCCTCCGTC 58.929 52.174 0.00 0.00 44.81 4.79
2215 2283 3.495806 CGTCTATTAGGTACTCCCTCCGT 60.496 52.174 0.00 0.00 44.81 4.69
2216 2284 3.072944 CGTCTATTAGGTACTCCCTCCG 58.927 54.545 0.00 0.00 44.81 4.63
2217 2285 4.097551 ACGTCTATTAGGTACTCCCTCC 57.902 50.000 0.00 0.00 44.81 4.30
2218 2286 7.573968 TTAAACGTCTATTAGGTACTCCCTC 57.426 40.000 0.00 0.00 44.81 4.30
2220 2288 6.183360 TGCTTAAACGTCTATTAGGTACTCCC 60.183 42.308 0.00 0.00 41.75 4.30
2221 2289 6.799512 TGCTTAAACGTCTATTAGGTACTCC 58.200 40.000 0.00 0.00 41.75 3.85
2222 2290 7.594386 GGATGCTTAAACGTCTATTAGGTACTC 59.406 40.741 0.00 0.00 41.75 2.59
2226 2294 6.481434 AGGATGCTTAAACGTCTATTAGGT 57.519 37.500 0.00 0.00 0.00 3.08
2232 2300 4.708421 ACACCTAGGATGCTTAAACGTCTA 59.292 41.667 17.98 0.00 0.00 2.59
2238 2306 3.352648 GGCAACACCTAGGATGCTTAAA 58.647 45.455 26.37 0.00 38.79 1.52
2508 2583 9.738832 GTTAAGCTCACATAAACCAAGTTAAAA 57.261 29.630 0.00 0.00 0.00 1.52
2643 2718 5.163468 ACAACACATTTTCAACATGCTACCA 60.163 36.000 0.00 0.00 0.00 3.25
2755 2830 0.613260 TTGCTCGTCAGGCCTGTTAT 59.387 50.000 31.58 0.00 0.00 1.89
2789 2864 8.033038 TCATTAGCTAATACAAGACGAACAAGT 58.967 33.333 18.45 0.00 0.00 3.16
2868 3002 5.824624 ACCACCAACATATATTCTGCTTCTG 59.175 40.000 0.00 0.00 0.00 3.02
2922 3056 1.310216 TGCATGCAGCCAAGCTACTG 61.310 55.000 18.46 6.90 44.83 2.74
2941 3075 3.851458 TCTGAGAATGCTGGCATGTAT 57.149 42.857 8.91 0.00 36.68 2.29
3168 3303 3.769739 ACCACAAAGTGAGAGCATACA 57.230 42.857 0.00 0.00 35.23 2.29
3839 3974 4.927267 ACATTGACCATAAGAGGACCAA 57.073 40.909 0.00 0.00 32.62 3.67
3943 4078 2.281484 TCCAAGCACCCGAACTGC 60.281 61.111 0.00 0.00 34.63 4.40
3975 4110 6.023357 ACAGTCATATCCTCTTCATCATCG 57.977 41.667 0.00 0.00 0.00 3.84
4445 4580 5.156355 CCTGTGTACAAATAAAGCAGCAAG 58.844 41.667 0.00 0.00 0.00 4.01
4456 4591 3.758554 GGATCTGCAACCTGTGTACAAAT 59.241 43.478 0.00 0.00 0.00 2.32
4872 5010 9.810231 CAACCAATAAAATCAAATTTGCTACAC 57.190 29.630 13.54 0.00 31.77 2.90
4941 5079 9.559958 CATCAACTGGAAACATTTAATCAGTAC 57.440 33.333 0.00 0.00 41.51 2.73
5374 5512 1.513586 GTAGACAACCCGACGAGCG 60.514 63.158 0.00 0.00 40.47 5.03
5453 5591 6.320434 TGTACAAGAACCATGATTCCCATA 57.680 37.500 0.00 0.00 33.31 2.74
5491 5629 9.297586 GTCATCAAATACACGTGTTCTAGATAA 57.702 33.333 28.55 9.33 0.00 1.75
5550 5688 5.939883 CACAGTCAATTGGAGTTTGGATCTA 59.060 40.000 5.42 0.00 0.00 1.98
5679 5817 6.956202 AATAAGGCTGGATCAGAAGAAATG 57.044 37.500 0.00 0.00 32.44 2.32
5708 5846 3.704566 TCATACAGGTCTTACGCCAGATT 59.295 43.478 0.00 0.00 0.00 2.40
5713 5851 2.688958 AGAGTCATACAGGTCTTACGCC 59.311 50.000 0.00 0.00 0.00 5.68
5749 5888 7.542130 GGTAAAAATGCCTGACAAATGTAGAAG 59.458 37.037 0.00 0.00 0.00 2.85
5875 6014 1.361204 TGCCCTTGTCAAGAGGATCA 58.639 50.000 14.42 5.50 37.82 2.92
5985 6124 4.037684 AGGCTGTATGTACGTTCAGTATCC 59.962 45.833 19.25 13.42 37.69 2.59
6034 6181 3.033184 CCTGGAAAATGGGTGTGCATAT 58.967 45.455 0.00 0.00 0.00 1.78
6173 6336 1.549243 TATGTTCCCAGCGCACCAGA 61.549 55.000 11.47 0.00 0.00 3.86
6344 6539 4.022068 TGGTTACACTAACTGGTTAGACGG 60.022 45.833 22.39 14.69 43.90 4.79
6577 6772 4.124238 CCTCACAAGAGTTTACCACGAAA 58.876 43.478 0.00 0.00 40.40 3.46
6608 6803 3.056962 ACAGCATGACCATAGCGATAGAG 60.057 47.826 0.00 0.00 39.69 2.43
6616 6811 8.887036 TTAAGTATTACACAGCATGACCATAG 57.113 34.615 0.00 0.00 39.69 2.23
6652 6847 8.702163 AAACAGAATACAAACTTTGAAACCTG 57.298 30.769 8.55 11.14 0.00 4.00
6697 6893 0.919710 GGAGGGGGCAGTAACAGAAT 59.080 55.000 0.00 0.00 0.00 2.40
6708 6904 0.537371 CAATATGGAACGGAGGGGGC 60.537 60.000 0.00 0.00 0.00 5.80
6716 6912 3.304659 GCCCTTATGCACAATATGGAACG 60.305 47.826 0.00 0.00 37.99 3.95
6719 6915 2.490718 GGGCCCTTATGCACAATATGGA 60.491 50.000 17.04 0.00 37.99 3.41
6721 6917 2.596346 TGGGCCCTTATGCACAATATG 58.404 47.619 25.70 0.00 42.87 1.78
6727 6923 0.465287 CCAAATGGGCCCTTATGCAC 59.535 55.000 25.70 0.00 34.38 4.57
6752 6987 2.696125 GCTCCCATTCCCCCTCCA 60.696 66.667 0.00 0.00 0.00 3.86
6753 6988 0.697854 TAAGCTCCCATTCCCCCTCC 60.698 60.000 0.00 0.00 0.00 4.30
6771 7006 9.457436 GGACTTTTAATCTGTTCACCCTTAATA 57.543 33.333 0.00 0.00 0.00 0.98
6772 7007 7.947890 TGGACTTTTAATCTGTTCACCCTTAAT 59.052 33.333 0.00 0.00 0.00 1.40
6780 7015 7.874940 CAATCAGTGGACTTTTAATCTGTTCA 58.125 34.615 0.00 0.00 0.00 3.18
6933 7189 1.474330 GGCCTGGGTGGACAAATAAG 58.526 55.000 0.00 0.00 45.54 1.73
6950 7206 0.540597 AGCTTTTCCTTGTGGAGGGC 60.541 55.000 0.00 0.00 46.31 5.19
6955 7211 6.271488 TGAATATGAAGCTTTTCCTTGTGG 57.729 37.500 0.00 0.00 0.00 4.17
6967 7224 2.613595 TGGACGTGCATGAATATGAAGC 59.386 45.455 14.17 0.00 36.36 3.86
6976 7233 4.202202 TGTGTATATGATGGACGTGCATGA 60.202 41.667 28.10 20.23 0.00 3.07
7099 7357 6.698766 GGAGGCATTTGATTCATTTGTGTATC 59.301 38.462 0.00 0.00 0.00 2.24
7127 7385 1.209019 AGAGGATCAATGAGCGCAACT 59.791 47.619 11.47 0.00 37.82 3.16
7137 7395 8.357290 TGATCAACATGAAAAAGAGGATCAAT 57.643 30.769 0.00 0.00 37.53 2.57
7163 7421 2.380064 TTGGGAATGCAAGAAGTGGT 57.620 45.000 0.00 0.00 0.00 4.16
7174 7432 2.449137 AGCCTCTTGGATTGGGAATG 57.551 50.000 0.00 0.00 34.57 2.67
7228 7488 0.802607 GGTAGCTTCAGAAGGCGACG 60.803 60.000 12.30 0.00 35.49 5.12
7230 7490 1.195115 ATGGTAGCTTCAGAAGGCGA 58.805 50.000 12.30 0.00 0.00 5.54
7239 7499 7.710896 AGAGAAATATGCAAAATGGTAGCTTC 58.289 34.615 0.00 0.00 0.00 3.86
7270 7530 6.798315 TTGAGAGAGAGAAAAGATTTGCAG 57.202 37.500 0.00 0.00 0.00 4.41
7280 7540 5.480642 AGCTGAACATTGAGAGAGAGAAA 57.519 39.130 0.00 0.00 0.00 2.52
7283 7543 4.567971 ACAAGCTGAACATTGAGAGAGAG 58.432 43.478 0.00 0.00 0.00 3.20
7287 7547 5.237996 TGAAAGACAAGCTGAACATTGAGAG 59.762 40.000 0.00 0.00 0.00 3.20
7300 7560 2.694213 GAGAGAGGGTGAAAGACAAGC 58.306 52.381 0.00 0.00 0.00 4.01
7322 7582 1.041437 GGAAGAGGATGGAGTACGGG 58.959 60.000 0.00 0.00 0.00 5.28
7354 7614 5.265191 AGAAGTAGAGGTACATGCTCTTCA 58.735 41.667 6.65 0.00 34.44 3.02
7362 7622 7.093684 GGAGTTGAAGAAGAAGTAGAGGTACAT 60.094 40.741 0.00 0.00 0.00 2.29
7364 7624 6.434965 AGGAGTTGAAGAAGAAGTAGAGGTAC 59.565 42.308 0.00 0.00 0.00 3.34
7367 7627 5.993748 AGGAGTTGAAGAAGAAGTAGAGG 57.006 43.478 0.00 0.00 0.00 3.69
7404 7664 3.258372 GCTCTTCATCATATGGACGGGTA 59.742 47.826 2.13 0.00 0.00 3.69
7405 7665 2.037772 GCTCTTCATCATATGGACGGGT 59.962 50.000 2.13 0.00 0.00 5.28


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.