Multiple sequence alignment - TraesCS7B01G278100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G278100 chr7B 100.000 3046 0 0 1 3046 508978428 508981473 0.000000e+00 5626.0
1 TraesCS7B01G278100 chr7B 99.074 324 2 1 1937 2260 39097956 39097634 5.660000e-162 580.0
2 TraesCS7B01G278100 chr7B 89.820 167 17 0 2289 2455 11441307 11441141 6.610000e-52 215.0
3 TraesCS7B01G278100 chr7B 89.349 169 18 0 2285 2453 650608924 650609092 2.380000e-51 213.0
4 TraesCS7B01G278100 chr7B 88.304 171 20 0 2284 2454 734071463 734071633 3.980000e-49 206.0
5 TraesCS7B01G278100 chr7A 87.801 1246 75 32 733 1938 549749904 549751112 0.000000e+00 1387.0
6 TraesCS7B01G278100 chr7A 87.648 591 32 19 2474 3046 549751237 549751804 0.000000e+00 649.0
7 TraesCS7B01G278100 chr7A 99.074 324 3 0 1937 2260 726896435 726896112 1.570000e-162 582.0
8 TraesCS7B01G278100 chr3B 98.236 737 12 1 1 737 9395855 9395120 0.000000e+00 1288.0
9 TraesCS7B01G278100 chr3B 88.182 220 19 3 518 736 791867149 791866936 3.900000e-64 255.0
10 TraesCS7B01G278100 chr3B 88.398 181 19 2 554 733 9396215 9396394 1.840000e-52 217.0
11 TraesCS7B01G278100 chr3B 87.059 170 21 1 2291 2459 654649873 654649704 1.110000e-44 191.0
12 TraesCS7B01G278100 chr2B 97.463 749 15 3 1 745 631857461 631856713 0.000000e+00 1275.0
13 TraesCS7B01G278100 chr2B 99.071 323 3 0 1938 2260 783865953 783866275 5.660000e-162 580.0
14 TraesCS7B01G278100 chr2B 84.642 293 38 5 1 287 154196943 154197234 4.970000e-73 285.0
15 TraesCS7B01G278100 chr2B 88.398 181 20 1 554 733 631857822 631858002 1.840000e-52 217.0
16 TraesCS7B01G278100 chr2B 84.404 218 27 4 1 212 453230017 453229801 1.110000e-49 207.0
17 TraesCS7B01G278100 chr2B 89.189 74 8 0 214 287 453229422 453229349 3.230000e-15 93.5
18 TraesCS7B01G278100 chr7D 87.664 989 58 17 733 1688 483297621 483298578 0.000000e+00 1092.0
19 TraesCS7B01G278100 chr7D 91.107 596 28 10 2459 3046 483298917 483299495 0.000000e+00 784.0
20 TraesCS7B01G278100 chr7D 90.517 232 17 5 1709 1938 483298568 483298796 4.940000e-78 302.0
21 TraesCS7B01G278100 chr7D 89.697 165 17 0 2289 2453 500775621 500775457 8.560000e-51 211.0
22 TraesCS7B01G278100 chr7D 86.667 180 21 3 2276 2453 296507666 296507844 2.400000e-46 196.0
23 TraesCS7B01G278100 chr6A 99.074 324 3 0 1938 2261 307896669 307896346 1.570000e-162 582.0
24 TraesCS7B01G278100 chr4B 99.074 324 3 0 1937 2260 579401250 579401573 1.570000e-162 582.0
25 TraesCS7B01G278100 chr4B 99.074 324 3 0 1937 2260 653733811 653733488 1.570000e-162 582.0
26 TraesCS7B01G278100 chr4B 83.051 295 40 8 1 287 656877311 656877019 3.010000e-65 259.0
27 TraesCS7B01G278100 chr4A 99.074 324 3 0 1937 2260 249545435 249545112 1.570000e-162 582.0
28 TraesCS7B01G278100 chr4A 87.344 482 37 10 274 737 6895801 6896276 5.780000e-147 531.0
29 TraesCS7B01G278100 chr4A 87.778 180 21 1 554 732 6895344 6895165 3.080000e-50 209.0
30 TraesCS7B01G278100 chr4A 85.635 181 23 2 2274 2453 232573048 232572870 1.440000e-43 187.0
31 TraesCS7B01G278100 chr5B 99.071 323 3 0 1938 2260 688022311 688021989 5.660000e-162 580.0
32 TraesCS7B01G278100 chr5B 90.909 165 15 0 2289 2453 59906866 59907030 3.950000e-54 222.0
33 TraesCS7B01G278100 chr5B 86.517 178 24 0 2281 2458 491637787 491637610 2.400000e-46 196.0
34 TraesCS7B01G278100 chr1B 98.476 328 5 0 1934 2261 503666098 503666425 2.040000e-161 579.0
35 TraesCS7B01G278100 chr1B 84.354 294 38 6 1 287 630566515 630566223 6.430000e-72 281.0
36 TraesCS7B01G278100 chr1B 90.123 162 16 0 2292 2453 649337120 649336959 8.560000e-51 211.0
37 TraesCS7B01G278100 chr1B 80.162 247 29 11 100 342 336391098 336391328 1.880000e-37 167.0
38 TraesCS7B01G278100 chrUn 86.473 414 34 11 8 412 69458917 69458517 4.660000e-118 435.0
39 TraesCS7B01G278100 chrUn 88.889 252 21 4 482 732 69447403 69447158 1.370000e-78 303.0
40 TraesCS7B01G278100 chrUn 92.857 42 3 0 412 453 69453852 69453811 9.120000e-06 62.1
41 TraesCS7B01G278100 chr2A 90.260 308 23 3 426 732 750384833 750385134 2.200000e-106 396.0
42 TraesCS7B01G278100 chr2A 93.916 263 13 1 1 263 750384575 750384834 7.920000e-106 394.0
43 TraesCS7B01G278100 chr2D 90.184 163 16 0 2291 2453 520539242 520539404 2.380000e-51 213.0
44 TraesCS7B01G278100 chr6D 89.759 166 16 1 2288 2453 90133357 90133521 8.560000e-51 211.0
45 TraesCS7B01G278100 chr5A 88.439 173 19 1 2290 2462 6597533 6597362 1.110000e-49 207.0
46 TraesCS7B01G278100 chr5A 88.166 169 20 0 2285 2453 320214237 320214405 5.150000e-48 202.0
47 TraesCS7B01G278100 chr5D 87.059 170 22 0 2285 2454 133300445 133300614 3.100000e-45 193.0
48 TraesCS7B01G278100 chr1A 85.876 177 23 2 2277 2453 155075247 155075421 1.440000e-43 187.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G278100 chr7B 508978428 508981473 3045 False 5626 5626 100.000000 1 3046 1 chr7B.!!$F1 3045
1 TraesCS7B01G278100 chr7A 549749904 549751804 1900 False 1018 1387 87.724500 733 3046 2 chr7A.!!$F1 2313
2 TraesCS7B01G278100 chr3B 9395120 9395855 735 True 1288 1288 98.236000 1 737 1 chr3B.!!$R1 736
3 TraesCS7B01G278100 chr2B 631856713 631857461 748 True 1275 1275 97.463000 1 745 1 chr2B.!!$R1 744
4 TraesCS7B01G278100 chr7D 483297621 483299495 1874 False 726 1092 89.762667 733 3046 3 chr7D.!!$F2 2313
5 TraesCS7B01G278100 chr2A 750384575 750385134 559 False 395 396 92.088000 1 732 2 chr2A.!!$F1 731

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
799 806 0.956633 CAATGATTCCAGGCCCATCG 59.043 55.0 0.0 0.0 0.0 3.84 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2219 2306 0.034574 CGGTCATGAATGGGTTGGGA 60.035 55.0 0.0 0.0 0.0 4.37 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
365 366 2.476852 TAGATGCGGCAACCAGGCAA 62.477 55.000 6.82 0.00 44.47 4.52
680 682 3.011566 TGCTGGTTTTGAAGTTGAGGA 57.988 42.857 0.00 0.00 0.00 3.71
770 777 3.670203 CAACTACGAAATGACCATTCGC 58.330 45.455 8.42 0.00 0.00 4.70
799 806 0.956633 CAATGATTCCAGGCCCATCG 59.043 55.000 0.00 0.00 0.00 3.84
841 848 3.244422 ACTTCTGCCAGTCGATAAACCAA 60.244 43.478 0.00 0.00 0.00 3.67
845 852 1.737793 GCCAGTCGATAAACCAACCTG 59.262 52.381 0.00 0.00 0.00 4.00
846 853 2.874457 GCCAGTCGATAAACCAACCTGT 60.874 50.000 0.00 0.00 0.00 4.00
847 854 3.000727 CCAGTCGATAAACCAACCTGTC 58.999 50.000 0.00 0.00 0.00 3.51
848 855 3.000727 CAGTCGATAAACCAACCTGTCC 58.999 50.000 0.00 0.00 0.00 4.02
851 858 3.187842 GTCGATAAACCAACCTGTCCAAC 59.812 47.826 0.00 0.00 0.00 3.77
852 859 3.071892 TCGATAAACCAACCTGTCCAACT 59.928 43.478 0.00 0.00 0.00 3.16
857 867 3.655615 ACCAACCTGTCCAACTAAACA 57.344 42.857 0.00 0.00 0.00 2.83
950 964 1.254026 TATTATAGCCGGAGCAGCGT 58.746 50.000 5.05 0.00 43.56 5.07
977 991 4.662961 CGAGCACTGCACGGTCCA 62.663 66.667 12.47 0.00 38.81 4.02
990 1006 4.026357 GTCCACCCCTCCCTCCCT 62.026 72.222 0.00 0.00 0.00 4.20
1006 1022 1.059913 CCCTCAGGACTCAACAACCT 58.940 55.000 0.00 0.00 33.47 3.50
1007 1023 1.002544 CCCTCAGGACTCAACAACCTC 59.997 57.143 0.00 0.00 33.47 3.85
1009 1025 1.613925 CTCAGGACTCAACAACCTCGA 59.386 52.381 0.00 0.00 31.06 4.04
1010 1026 1.613925 TCAGGACTCAACAACCTCGAG 59.386 52.381 5.13 5.13 31.06 4.04
1013 1034 0.033504 GACTCAACAACCTCGAGCCA 59.966 55.000 6.99 0.00 0.00 4.75
1113 1138 2.178521 GCCATGTCGTCGTCGTCT 59.821 61.111 1.33 0.00 38.33 4.18
1127 1152 4.493747 GTCTTCGTCCTCGGCGGG 62.494 72.222 7.21 1.99 37.69 6.13
1287 1315 4.680537 ACGTCCCCGTCTCCTGCT 62.681 66.667 0.00 0.00 46.28 4.24
1324 1352 2.283966 CCTCCTCCGGTGAGTGGT 60.284 66.667 18.21 0.00 36.86 4.16
1363 1397 2.734606 CTGCCGTTCGTTACTTCATTCA 59.265 45.455 0.00 0.00 0.00 2.57
1365 1399 3.369756 TGCCGTTCGTTACTTCATTCATC 59.630 43.478 0.00 0.00 0.00 2.92
1366 1400 3.242316 GCCGTTCGTTACTTCATTCATCC 60.242 47.826 0.00 0.00 0.00 3.51
1367 1401 3.000078 CCGTTCGTTACTTCATTCATCCG 60.000 47.826 0.00 0.00 0.00 4.18
1368 1402 3.541516 CGTTCGTTACTTCATTCATCCGC 60.542 47.826 0.00 0.00 0.00 5.54
1369 1403 3.239587 TCGTTACTTCATTCATCCGCA 57.760 42.857 0.00 0.00 0.00 5.69
1370 1404 2.927477 TCGTTACTTCATTCATCCGCAC 59.073 45.455 0.00 0.00 0.00 5.34
1377 1411 3.329542 ATTCATCCGCACCCGCACT 62.330 57.895 0.00 0.00 38.40 4.40
1400 1434 3.531982 CGCAGTTCTTTGTTCTTACGTG 58.468 45.455 0.00 0.00 0.00 4.49
1401 1435 3.603857 CGCAGTTCTTTGTTCTTACGTGG 60.604 47.826 0.00 0.00 0.00 4.94
1403 1437 4.201881 GCAGTTCTTTGTTCTTACGTGGTT 60.202 41.667 0.00 0.00 0.00 3.67
1404 1438 5.006941 GCAGTTCTTTGTTCTTACGTGGTTA 59.993 40.000 0.00 0.00 0.00 2.85
1408 1445 6.774354 TCTTTGTTCTTACGTGGTTATGTC 57.226 37.500 0.00 0.00 0.00 3.06
1674 1723 1.161843 CAACCGGCGTCAATTAACCT 58.838 50.000 6.01 0.00 0.00 3.50
1684 1734 3.123284 CGTCAATTAACCTCGCCGTTTAA 59.877 43.478 0.00 0.00 0.00 1.52
1685 1735 4.201744 CGTCAATTAACCTCGCCGTTTAAT 60.202 41.667 0.00 0.00 0.00 1.40
1686 1736 5.260900 GTCAATTAACCTCGCCGTTTAATC 58.739 41.667 3.04 0.00 0.00 1.75
1687 1737 4.333372 TCAATTAACCTCGCCGTTTAATCC 59.667 41.667 3.04 0.00 0.00 3.01
1688 1738 3.615224 TTAACCTCGCCGTTTAATCCT 57.385 42.857 0.00 0.00 0.00 3.24
1689 1739 2.484742 AACCTCGCCGTTTAATCCTT 57.515 45.000 0.00 0.00 0.00 3.36
1690 1740 3.615224 AACCTCGCCGTTTAATCCTTA 57.385 42.857 0.00 0.00 0.00 2.69
1691 1741 2.897436 ACCTCGCCGTTTAATCCTTAC 58.103 47.619 0.00 0.00 0.00 2.34
1692 1742 2.498885 ACCTCGCCGTTTAATCCTTACT 59.501 45.455 0.00 0.00 0.00 2.24
1693 1743 3.701040 ACCTCGCCGTTTAATCCTTACTA 59.299 43.478 0.00 0.00 0.00 1.82
1694 1744 4.047142 CCTCGCCGTTTAATCCTTACTAC 58.953 47.826 0.00 0.00 0.00 2.73
1701 1751 6.485648 GCCGTTTAATCCTTACTACATCCATT 59.514 38.462 0.00 0.00 0.00 3.16
1811 1862 1.878522 GTGAGCATCCCGTACGCTG 60.879 63.158 10.49 7.99 35.75 5.18
1813 1864 3.716539 GAGCATCCCGTACGCTGCA 62.717 63.158 26.52 7.15 35.75 4.41
1814 1865 3.264897 GCATCCCGTACGCTGCAG 61.265 66.667 22.58 10.11 34.77 4.41
1857 1908 2.995258 TGTCGTTAATTGTTCTACCCGC 59.005 45.455 0.00 0.00 0.00 6.13
1904 1963 1.210967 CCCGGGTAAGTAGCCAATTGA 59.789 52.381 14.18 0.00 43.88 2.57
1916 1975 5.954150 AGTAGCCAATTGATCCAAGAACAAT 59.046 36.000 7.12 0.00 36.79 2.71
1927 1986 2.415893 CCAAGAACAATGGATCGTTGCC 60.416 50.000 8.81 3.14 40.56 4.52
1928 1987 2.198827 AGAACAATGGATCGTTGCCA 57.801 45.000 8.81 0.00 40.24 4.92
1929 1988 2.513753 AGAACAATGGATCGTTGCCAA 58.486 42.857 8.81 0.00 39.21 4.52
1930 1989 3.091545 AGAACAATGGATCGTTGCCAAT 58.908 40.909 8.81 0.00 39.21 3.16
1932 1991 3.235157 ACAATGGATCGTTGCCAATTG 57.765 42.857 0.00 0.00 39.21 2.32
1933 1992 2.824936 ACAATGGATCGTTGCCAATTGA 59.175 40.909 7.12 0.00 39.21 2.57
1935 1994 3.996150 ATGGATCGTTGCCAATTGATC 57.004 42.857 7.12 11.90 39.21 2.92
1936 1995 3.003394 TGGATCGTTGCCAATTGATCT 57.997 42.857 16.99 0.00 37.84 2.75
1937 1996 4.149511 TGGATCGTTGCCAATTGATCTA 57.850 40.909 16.99 11.44 37.84 1.98
1938 1997 4.129380 TGGATCGTTGCCAATTGATCTAG 58.871 43.478 16.99 0.00 37.84 2.43
1942 2001 4.129380 TCGTTGCCAATTGATCTAGGATG 58.871 43.478 7.12 0.00 0.00 3.51
1943 2002 3.304257 CGTTGCCAATTGATCTAGGATGC 60.304 47.826 7.12 0.00 0.00 3.91
1944 2003 2.497138 TGCCAATTGATCTAGGATGCG 58.503 47.619 7.12 0.00 0.00 4.73
1945 2004 2.158769 TGCCAATTGATCTAGGATGCGT 60.159 45.455 7.12 0.00 0.00 5.24
1947 2006 3.316308 GCCAATTGATCTAGGATGCGTTT 59.684 43.478 7.12 0.00 0.00 3.60
1949 2008 4.261322 CCAATTGATCTAGGATGCGTTTGG 60.261 45.833 7.12 0.00 0.00 3.28
1951 2010 3.627395 TGATCTAGGATGCGTTTGGTT 57.373 42.857 0.00 0.00 0.00 3.67
1953 2012 3.055458 TGATCTAGGATGCGTTTGGTTGA 60.055 43.478 0.00 0.00 0.00 3.18
1954 2013 3.410631 TCTAGGATGCGTTTGGTTGAA 57.589 42.857 0.00 0.00 0.00 2.69
1955 2014 3.334691 TCTAGGATGCGTTTGGTTGAAG 58.665 45.455 0.00 0.00 0.00 3.02
1956 2015 1.247567 AGGATGCGTTTGGTTGAAGG 58.752 50.000 0.00 0.00 0.00 3.46
1957 2016 0.958822 GGATGCGTTTGGTTGAAGGT 59.041 50.000 0.00 0.00 0.00 3.50
1960 2019 0.736053 TGCGTTTGGTTGAAGGTGTC 59.264 50.000 0.00 0.00 0.00 3.67
1962 2021 1.011333 CGTTTGGTTGAAGGTGTCGT 58.989 50.000 0.00 0.00 0.00 4.34
1963 2022 2.203401 CGTTTGGTTGAAGGTGTCGTA 58.797 47.619 0.00 0.00 0.00 3.43
1965 2024 3.363575 CGTTTGGTTGAAGGTGTCGTATG 60.364 47.826 0.00 0.00 0.00 2.39
1966 2025 3.755112 TTGGTTGAAGGTGTCGTATGA 57.245 42.857 0.00 0.00 0.00 2.15
1967 2026 3.755112 TGGTTGAAGGTGTCGTATGAA 57.245 42.857 0.00 0.00 0.00 2.57
1968 2027 4.280436 TGGTTGAAGGTGTCGTATGAAT 57.720 40.909 0.00 0.00 0.00 2.57
1969 2028 4.000325 TGGTTGAAGGTGTCGTATGAATG 59.000 43.478 0.00 0.00 0.00 2.67
1970 2029 3.374058 GGTTGAAGGTGTCGTATGAATGG 59.626 47.826 0.00 0.00 0.00 3.16
1971 2030 3.260475 TGAAGGTGTCGTATGAATGGG 57.740 47.619 0.00 0.00 0.00 4.00
1973 2032 3.008594 TGAAGGTGTCGTATGAATGGGTT 59.991 43.478 0.00 0.00 0.00 4.11
1974 2033 2.985896 AGGTGTCGTATGAATGGGTTG 58.014 47.619 0.00 0.00 0.00 3.77
1975 2034 2.014128 GGTGTCGTATGAATGGGTTGG 58.986 52.381 0.00 0.00 0.00 3.77
1976 2035 2.355310 GGTGTCGTATGAATGGGTTGGA 60.355 50.000 0.00 0.00 0.00 3.53
1977 2036 3.340034 GTGTCGTATGAATGGGTTGGAA 58.660 45.455 0.00 0.00 0.00 3.53
1978 2037 3.126343 GTGTCGTATGAATGGGTTGGAAC 59.874 47.826 0.00 0.00 0.00 3.62
2021 2108 7.479897 TTGAACCATTCAATTCATGTGTTTG 57.520 32.000 0.00 0.00 44.21 2.93
2022 2109 5.990386 TGAACCATTCAATTCATGTGTTTGG 59.010 36.000 0.00 0.00 36.59 3.28
2023 2110 4.317488 ACCATTCAATTCATGTGTTTGGC 58.683 39.130 0.00 0.00 0.00 4.52
2024 2111 4.040706 ACCATTCAATTCATGTGTTTGGCT 59.959 37.500 0.00 0.00 0.00 4.75
2025 2112 4.390603 CCATTCAATTCATGTGTTTGGCTG 59.609 41.667 0.00 0.00 0.00 4.85
2026 2113 4.933505 TTCAATTCATGTGTTTGGCTGA 57.066 36.364 0.00 0.00 0.00 4.26
2027 2114 4.933505 TCAATTCATGTGTTTGGCTGAA 57.066 36.364 0.00 0.00 32.63 3.02
2028 2115 5.471556 TCAATTCATGTGTTTGGCTGAAT 57.528 34.783 0.00 0.00 39.39 2.57
2029 2116 6.587206 TCAATTCATGTGTTTGGCTGAATA 57.413 33.333 0.00 0.00 37.35 1.75
2030 2117 7.172868 TCAATTCATGTGTTTGGCTGAATAT 57.827 32.000 0.00 0.00 37.35 1.28
2031 2118 8.291191 TCAATTCATGTGTTTGGCTGAATATA 57.709 30.769 0.00 0.00 37.35 0.86
2032 2119 8.747471 TCAATTCATGTGTTTGGCTGAATATAA 58.253 29.630 0.00 0.00 37.35 0.98
2033 2120 9.027129 CAATTCATGTGTTTGGCTGAATATAAG 57.973 33.333 0.00 0.00 37.35 1.73
2034 2121 7.701539 TTCATGTGTTTGGCTGAATATAAGT 57.298 32.000 0.00 0.00 0.00 2.24
2035 2122 7.087409 TCATGTGTTTGGCTGAATATAAGTG 57.913 36.000 0.00 0.00 0.00 3.16
2036 2123 5.895636 TGTGTTTGGCTGAATATAAGTGG 57.104 39.130 0.00 0.00 0.00 4.00
2037 2124 5.321102 TGTGTTTGGCTGAATATAAGTGGT 58.679 37.500 0.00 0.00 0.00 4.16
2038 2125 5.182950 TGTGTTTGGCTGAATATAAGTGGTG 59.817 40.000 0.00 0.00 0.00 4.17
2039 2126 5.414454 GTGTTTGGCTGAATATAAGTGGTGA 59.586 40.000 0.00 0.00 0.00 4.02
2040 2127 5.647658 TGTTTGGCTGAATATAAGTGGTGAG 59.352 40.000 0.00 0.00 0.00 3.51
2041 2128 3.808728 TGGCTGAATATAAGTGGTGAGC 58.191 45.455 0.00 0.00 0.00 4.26
2042 2129 3.455910 TGGCTGAATATAAGTGGTGAGCT 59.544 43.478 0.00 0.00 0.00 4.09
2043 2130 4.653801 TGGCTGAATATAAGTGGTGAGCTA 59.346 41.667 0.00 0.00 0.00 3.32
2044 2131 5.130311 TGGCTGAATATAAGTGGTGAGCTAA 59.870 40.000 0.00 0.00 0.00 3.09
2045 2132 6.183361 TGGCTGAATATAAGTGGTGAGCTAAT 60.183 38.462 0.00 0.00 0.00 1.73
2046 2133 6.712547 GGCTGAATATAAGTGGTGAGCTAATT 59.287 38.462 0.00 0.00 0.00 1.40
2047 2134 7.878127 GGCTGAATATAAGTGGTGAGCTAATTA 59.122 37.037 0.00 0.00 0.00 1.40
2048 2135 9.442047 GCTGAATATAAGTGGTGAGCTAATTAT 57.558 33.333 0.00 0.00 32.60 1.28
2055 2142 9.780186 ATAAGTGGTGAGCTAATTATTTAGGAC 57.220 33.333 6.54 0.00 36.18 3.85
2056 2143 6.281405 AGTGGTGAGCTAATTATTTAGGACG 58.719 40.000 6.54 0.00 36.18 4.79
2057 2144 5.465724 GTGGTGAGCTAATTATTTAGGACGG 59.534 44.000 6.54 0.00 36.18 4.79
2058 2145 4.995487 GGTGAGCTAATTATTTAGGACGGG 59.005 45.833 6.54 0.00 36.18 5.28
2059 2146 5.221581 GGTGAGCTAATTATTTAGGACGGGA 60.222 44.000 6.54 0.00 36.18 5.14
2060 2147 5.695363 GTGAGCTAATTATTTAGGACGGGAC 59.305 44.000 6.54 0.00 36.18 4.46
2061 2148 5.221581 TGAGCTAATTATTTAGGACGGGACC 60.222 44.000 6.54 0.00 36.18 4.46
2062 2149 4.657039 AGCTAATTATTTAGGACGGGACCA 59.343 41.667 6.54 0.00 36.18 4.02
2063 2150 4.753610 GCTAATTATTTAGGACGGGACCAC 59.246 45.833 6.54 0.00 36.18 4.16
2064 2151 3.851458 ATTATTTAGGACGGGACCACC 57.149 47.619 0.00 0.00 0.00 4.61
2065 2152 2.250921 TATTTAGGACGGGACCACCA 57.749 50.000 0.00 0.00 40.22 4.17
2066 2153 0.909623 ATTTAGGACGGGACCACCAG 59.090 55.000 0.00 0.00 40.22 4.00
2067 2154 0.472352 TTTAGGACGGGACCACCAGT 60.472 55.000 0.00 0.00 46.44 4.00
2076 2163 2.846371 GACCACCAGTCATGCTCAC 58.154 57.895 0.00 0.00 45.55 3.51
2077 2164 0.035317 GACCACCAGTCATGCTCACA 59.965 55.000 0.00 0.00 45.55 3.58
2078 2165 0.694771 ACCACCAGTCATGCTCACAT 59.305 50.000 0.00 0.00 36.79 3.21
2079 2166 1.908619 ACCACCAGTCATGCTCACATA 59.091 47.619 0.00 0.00 33.67 2.29
2080 2167 2.093288 ACCACCAGTCATGCTCACATAG 60.093 50.000 0.00 0.00 33.67 2.23
2081 2168 2.093288 CCACCAGTCATGCTCACATAGT 60.093 50.000 0.00 0.00 33.67 2.12
2082 2169 3.193263 CACCAGTCATGCTCACATAGTC 58.807 50.000 0.00 0.00 33.67 2.59
2083 2170 2.833943 ACCAGTCATGCTCACATAGTCA 59.166 45.455 0.00 0.00 33.67 3.41
2084 2171 3.453717 ACCAGTCATGCTCACATAGTCAT 59.546 43.478 0.00 0.00 33.67 3.06
2085 2172 3.808174 CCAGTCATGCTCACATAGTCATG 59.192 47.826 0.00 0.00 39.28 3.07
2086 2173 3.247886 CAGTCATGCTCACATAGTCATGC 59.752 47.826 0.00 0.00 38.52 4.06
2087 2174 3.118519 AGTCATGCTCACATAGTCATGCA 60.119 43.478 0.00 0.00 38.52 3.96
2088 2175 3.813724 GTCATGCTCACATAGTCATGCAT 59.186 43.478 0.00 0.00 41.08 3.96
2090 2177 1.944709 TGCTCACATAGTCATGCATGC 59.055 47.619 22.25 11.82 35.39 4.06
2091 2178 1.944709 GCTCACATAGTCATGCATGCA 59.055 47.619 25.04 25.04 35.39 3.96
2092 2179 2.356695 GCTCACATAGTCATGCATGCAA 59.643 45.455 26.68 8.17 35.39 4.08
2093 2180 3.181494 GCTCACATAGTCATGCATGCAAA 60.181 43.478 26.68 13.49 35.39 3.68
2094 2181 4.598062 CTCACATAGTCATGCATGCAAAG 58.402 43.478 26.68 20.04 35.39 2.77
2095 2182 3.379057 TCACATAGTCATGCATGCAAAGG 59.621 43.478 26.68 17.10 35.39 3.11
2096 2183 2.691526 ACATAGTCATGCATGCAAAGGG 59.308 45.455 26.68 14.51 35.39 3.95
2097 2184 2.512692 TAGTCATGCATGCAAAGGGT 57.487 45.000 26.68 11.08 0.00 4.34
2098 2185 0.892755 AGTCATGCATGCAAAGGGTG 59.107 50.000 26.68 17.99 0.00 4.61
2099 2186 0.108520 GTCATGCATGCAAAGGGTGG 60.109 55.000 26.68 8.41 0.00 4.61
2100 2187 1.448893 CATGCATGCAAAGGGTGGC 60.449 57.895 26.68 0.00 0.00 5.01
2101 2188 2.662070 ATGCATGCAAAGGGTGGCC 61.662 57.895 26.68 0.00 0.00 5.36
2102 2189 3.312718 GCATGCAAAGGGTGGCCA 61.313 61.111 14.21 0.00 0.00 5.36
2103 2190 2.662070 GCATGCAAAGGGTGGCCAT 61.662 57.895 9.72 0.00 0.00 4.40
2104 2191 1.984817 CATGCAAAGGGTGGCCATT 59.015 52.632 9.72 0.00 0.00 3.16
2105 2192 0.325602 CATGCAAAGGGTGGCCATTT 59.674 50.000 9.72 2.01 38.06 2.32
2111 2198 1.185315 AAGGGTGGCCATTTGATTCG 58.815 50.000 9.72 0.00 0.00 3.34
2112 2199 0.331278 AGGGTGGCCATTTGATTCGA 59.669 50.000 9.72 0.00 0.00 3.71
2113 2200 0.455815 GGGTGGCCATTTGATTCGAC 59.544 55.000 9.72 0.00 0.00 4.20
2114 2201 0.455815 GGTGGCCATTTGATTCGACC 59.544 55.000 9.72 0.00 0.00 4.79
2115 2202 0.098728 GTGGCCATTTGATTCGACCG 59.901 55.000 9.72 0.00 0.00 4.79
2116 2203 0.035915 TGGCCATTTGATTCGACCGA 60.036 50.000 0.00 0.00 0.00 4.69
2117 2204 1.308998 GGCCATTTGATTCGACCGAT 58.691 50.000 0.00 0.00 0.00 4.18
2118 2205 1.676006 GGCCATTTGATTCGACCGATT 59.324 47.619 0.00 0.00 0.00 3.34
2119 2206 2.099098 GGCCATTTGATTCGACCGATTT 59.901 45.455 0.00 0.00 0.00 2.17
2120 2207 3.108144 GCCATTTGATTCGACCGATTTG 58.892 45.455 0.00 0.00 0.00 2.32
2121 2208 3.694734 CCATTTGATTCGACCGATTTGG 58.305 45.455 0.00 0.00 46.41 3.28
2130 2217 4.832741 CCGATTTGGTTGGGTGGA 57.167 55.556 0.00 0.00 0.00 4.02
2131 2218 3.043998 CCGATTTGGTTGGGTGGAA 57.956 52.632 0.00 0.00 0.00 3.53
2132 2219 0.601057 CCGATTTGGTTGGGTGGAAC 59.399 55.000 0.00 0.00 0.00 3.62
2133 2220 0.239879 CGATTTGGTTGGGTGGAACG 59.760 55.000 0.00 0.00 38.12 3.95
2134 2221 0.601057 GATTTGGTTGGGTGGAACGG 59.399 55.000 0.00 0.00 38.12 4.44
2135 2222 0.105913 ATTTGGTTGGGTGGAACGGT 60.106 50.000 0.00 0.00 38.12 4.83
2136 2223 0.324460 TTTGGTTGGGTGGAACGGTT 60.324 50.000 0.00 0.00 38.12 4.44
2137 2224 0.752376 TTGGTTGGGTGGAACGGTTC 60.752 55.000 12.41 12.41 38.12 3.62
2138 2225 1.152922 GGTTGGGTGGAACGGTTCA 60.153 57.895 21.36 6.13 38.12 3.18
2139 2226 1.170290 GGTTGGGTGGAACGGTTCAG 61.170 60.000 21.36 0.00 38.12 3.02
2140 2227 1.527380 TTGGGTGGAACGGTTCAGC 60.527 57.895 21.36 1.11 38.12 4.26
2141 2228 2.112297 GGGTGGAACGGTTCAGCA 59.888 61.111 21.36 9.16 38.12 4.41
2142 2229 1.303317 GGGTGGAACGGTTCAGCAT 60.303 57.895 21.36 0.00 38.12 3.79
2143 2230 1.305930 GGGTGGAACGGTTCAGCATC 61.306 60.000 21.36 11.58 38.12 3.91
2144 2231 0.321653 GGTGGAACGGTTCAGCATCT 60.322 55.000 21.36 0.00 38.12 2.90
2145 2232 1.523758 GTGGAACGGTTCAGCATCTT 58.476 50.000 21.36 0.00 0.00 2.40
2146 2233 1.464997 GTGGAACGGTTCAGCATCTTC 59.535 52.381 21.36 3.29 0.00 2.87
2147 2234 1.071542 TGGAACGGTTCAGCATCTTCA 59.928 47.619 21.36 5.77 0.00 3.02
2148 2235 2.290260 TGGAACGGTTCAGCATCTTCAT 60.290 45.455 21.36 0.00 0.00 2.57
2149 2236 2.096496 GGAACGGTTCAGCATCTTCATG 59.904 50.000 21.36 0.00 0.00 3.07
2150 2237 1.742761 ACGGTTCAGCATCTTCATGG 58.257 50.000 0.00 0.00 0.00 3.66
2151 2238 0.379669 CGGTTCAGCATCTTCATGGC 59.620 55.000 0.00 0.00 0.00 4.40
2152 2239 1.466856 GGTTCAGCATCTTCATGGCA 58.533 50.000 0.00 0.00 0.00 4.92
2153 2240 2.029623 GGTTCAGCATCTTCATGGCAT 58.970 47.619 0.00 0.00 0.00 4.40
2154 2241 3.216800 GGTTCAGCATCTTCATGGCATA 58.783 45.455 0.00 0.00 0.00 3.14
2155 2242 3.825014 GGTTCAGCATCTTCATGGCATAT 59.175 43.478 0.00 0.00 0.00 1.78
2156 2243 4.280174 GGTTCAGCATCTTCATGGCATATT 59.720 41.667 0.00 0.00 0.00 1.28
2157 2244 5.458891 GTTCAGCATCTTCATGGCATATTC 58.541 41.667 0.00 0.00 0.00 1.75
2158 2245 4.981812 TCAGCATCTTCATGGCATATTCT 58.018 39.130 0.00 0.00 0.00 2.40
2159 2246 5.001874 TCAGCATCTTCATGGCATATTCTC 58.998 41.667 0.00 0.00 0.00 2.87
2160 2247 5.004448 CAGCATCTTCATGGCATATTCTCT 58.996 41.667 0.00 0.00 0.00 3.10
2161 2248 5.473846 CAGCATCTTCATGGCATATTCTCTT 59.526 40.000 0.00 0.00 0.00 2.85
2162 2249 6.016192 CAGCATCTTCATGGCATATTCTCTTT 60.016 38.462 0.00 0.00 0.00 2.52
2163 2250 6.207025 AGCATCTTCATGGCATATTCTCTTTC 59.793 38.462 0.00 0.00 0.00 2.62
2164 2251 6.207025 GCATCTTCATGGCATATTCTCTTTCT 59.793 38.462 0.00 0.00 0.00 2.52
2165 2252 7.255520 GCATCTTCATGGCATATTCTCTTTCTT 60.256 37.037 0.00 0.00 0.00 2.52
2166 2253 8.630917 CATCTTCATGGCATATTCTCTTTCTTT 58.369 33.333 0.00 0.00 0.00 2.52
2167 2254 7.993101 TCTTCATGGCATATTCTCTTTCTTTG 58.007 34.615 0.00 0.00 0.00 2.77
2168 2255 6.704289 TCATGGCATATTCTCTTTCTTTGG 57.296 37.500 0.00 0.00 0.00 3.28
2169 2256 4.989279 TGGCATATTCTCTTTCTTTGGC 57.011 40.909 0.00 0.00 0.00 4.52
2170 2257 4.603131 TGGCATATTCTCTTTCTTTGGCT 58.397 39.130 0.00 0.00 0.00 4.75
2171 2258 4.641989 TGGCATATTCTCTTTCTTTGGCTC 59.358 41.667 0.00 0.00 0.00 4.70
2172 2259 4.260948 GGCATATTCTCTTTCTTTGGCTCG 60.261 45.833 0.00 0.00 0.00 5.03
2173 2260 4.572389 GCATATTCTCTTTCTTTGGCTCGA 59.428 41.667 0.00 0.00 0.00 4.04
2174 2261 5.065218 GCATATTCTCTTTCTTTGGCTCGAA 59.935 40.000 0.00 0.00 0.00 3.71
2175 2262 6.481984 CATATTCTCTTTCTTTGGCTCGAAC 58.518 40.000 0.00 0.00 0.00 3.95
2176 2263 2.767505 TCTCTTTCTTTGGCTCGAACC 58.232 47.619 0.00 0.00 0.00 3.62
2177 2264 2.104111 TCTCTTTCTTTGGCTCGAACCA 59.896 45.455 2.67 2.67 38.16 3.67
2178 2265 3.077359 CTCTTTCTTTGGCTCGAACCAT 58.923 45.455 8.68 0.00 40.13 3.55
2179 2266 3.486383 TCTTTCTTTGGCTCGAACCATT 58.514 40.909 8.68 0.00 40.13 3.16
2180 2267 3.502211 TCTTTCTTTGGCTCGAACCATTC 59.498 43.478 8.68 0.00 40.13 2.67
2181 2268 2.559698 TCTTTGGCTCGAACCATTCA 57.440 45.000 8.68 0.00 40.13 2.57
2182 2269 3.071874 TCTTTGGCTCGAACCATTCAT 57.928 42.857 8.68 0.00 40.13 2.57
2183 2270 2.749076 TCTTTGGCTCGAACCATTCATG 59.251 45.455 8.68 0.00 40.13 3.07
2184 2271 2.198827 TTGGCTCGAACCATTCATGT 57.801 45.000 8.68 0.00 40.13 3.21
2185 2272 1.452110 TGGCTCGAACCATTCATGTG 58.548 50.000 2.67 0.00 33.75 3.21
2186 2273 0.099436 GGCTCGAACCATTCATGTGC 59.901 55.000 0.00 0.00 0.00 4.57
2187 2274 1.089920 GCTCGAACCATTCATGTGCT 58.910 50.000 0.00 0.00 0.00 4.40
2188 2275 1.470098 GCTCGAACCATTCATGTGCTT 59.530 47.619 0.00 0.00 0.00 3.91
2189 2276 2.095059 GCTCGAACCATTCATGTGCTTT 60.095 45.455 0.00 0.00 0.00 3.51
2190 2277 3.126858 GCTCGAACCATTCATGTGCTTTA 59.873 43.478 0.00 0.00 0.00 1.85
2191 2278 4.201950 GCTCGAACCATTCATGTGCTTTAT 60.202 41.667 0.00 0.00 0.00 1.40
2192 2279 5.007626 GCTCGAACCATTCATGTGCTTTATA 59.992 40.000 0.00 0.00 0.00 0.98
2193 2280 6.458206 GCTCGAACCATTCATGTGCTTTATAA 60.458 38.462 0.00 0.00 0.00 0.98
2194 2281 6.781138 TCGAACCATTCATGTGCTTTATAAC 58.219 36.000 0.00 0.00 0.00 1.89
2195 2282 5.971202 CGAACCATTCATGTGCTTTATAACC 59.029 40.000 0.00 0.00 0.00 2.85
2196 2283 6.404184 CGAACCATTCATGTGCTTTATAACCA 60.404 38.462 0.00 0.00 0.00 3.67
2197 2284 6.849085 ACCATTCATGTGCTTTATAACCAA 57.151 33.333 0.00 0.00 0.00 3.67
2198 2285 7.238486 ACCATTCATGTGCTTTATAACCAAA 57.762 32.000 0.00 0.00 0.00 3.28
2199 2286 7.096551 ACCATTCATGTGCTTTATAACCAAAC 58.903 34.615 0.00 0.00 0.00 2.93
2200 2287 7.095910 CCATTCATGTGCTTTATAACCAAACA 58.904 34.615 0.00 0.00 0.00 2.83
2201 2288 7.765360 CCATTCATGTGCTTTATAACCAAACAT 59.235 33.333 0.00 0.00 0.00 2.71
2202 2289 8.597227 CATTCATGTGCTTTATAACCAAACATG 58.403 33.333 16.42 16.42 42.90 3.21
2203 2290 7.225784 TCATGTGCTTTATAACCAAACATGT 57.774 32.000 19.24 0.00 42.41 3.21
2204 2291 7.312154 TCATGTGCTTTATAACCAAACATGTC 58.688 34.615 19.24 0.00 42.41 3.06
2205 2292 6.892658 TGTGCTTTATAACCAAACATGTCT 57.107 33.333 0.00 0.00 0.00 3.41
2206 2293 7.987750 TGTGCTTTATAACCAAACATGTCTA 57.012 32.000 0.00 0.00 0.00 2.59
2207 2294 8.574251 TGTGCTTTATAACCAAACATGTCTAT 57.426 30.769 0.00 0.00 0.00 1.98
2208 2295 9.019656 TGTGCTTTATAACCAAACATGTCTATT 57.980 29.630 0.00 0.00 0.00 1.73
2209 2296 9.855021 GTGCTTTATAACCAAACATGTCTATTT 57.145 29.630 0.00 0.00 0.00 1.40
2217 2304 6.668323 ACCAAACATGTCTATTTTCTGAACG 58.332 36.000 0.00 0.00 0.00 3.95
2218 2305 6.485313 ACCAAACATGTCTATTTTCTGAACGA 59.515 34.615 0.00 0.00 0.00 3.85
2219 2306 7.174946 ACCAAACATGTCTATTTTCTGAACGAT 59.825 33.333 0.00 0.00 0.00 3.73
2220 2307 7.693951 CCAAACATGTCTATTTTCTGAACGATC 59.306 37.037 0.00 0.00 0.00 3.69
2221 2308 6.910536 ACATGTCTATTTTCTGAACGATCC 57.089 37.500 0.00 0.00 0.00 3.36
2222 2309 5.817816 ACATGTCTATTTTCTGAACGATCCC 59.182 40.000 0.00 0.00 0.00 3.85
2223 2310 5.414789 TGTCTATTTTCTGAACGATCCCA 57.585 39.130 0.00 0.00 0.00 4.37
2224 2311 5.800296 TGTCTATTTTCTGAACGATCCCAA 58.200 37.500 0.00 0.00 0.00 4.12
2225 2312 5.642063 TGTCTATTTTCTGAACGATCCCAAC 59.358 40.000 0.00 0.00 0.00 3.77
2226 2313 5.064834 GTCTATTTTCTGAACGATCCCAACC 59.935 44.000 0.00 0.00 0.00 3.77
2227 2314 2.194201 TTTCTGAACGATCCCAACCC 57.806 50.000 0.00 0.00 0.00 4.11
2228 2315 1.060729 TTCTGAACGATCCCAACCCA 58.939 50.000 0.00 0.00 0.00 4.51
2229 2316 1.285280 TCTGAACGATCCCAACCCAT 58.715 50.000 0.00 0.00 0.00 4.00
2230 2317 1.633432 TCTGAACGATCCCAACCCATT 59.367 47.619 0.00 0.00 0.00 3.16
2231 2318 2.017049 CTGAACGATCCCAACCCATTC 58.983 52.381 0.00 0.00 0.00 2.67
2232 2319 1.352687 TGAACGATCCCAACCCATTCA 59.647 47.619 0.00 0.00 0.00 2.57
2233 2320 2.025416 TGAACGATCCCAACCCATTCAT 60.025 45.455 0.00 0.00 0.00 2.57
2234 2321 2.057137 ACGATCCCAACCCATTCATG 57.943 50.000 0.00 0.00 0.00 3.07
2235 2322 1.563879 ACGATCCCAACCCATTCATGA 59.436 47.619 0.00 0.00 0.00 3.07
2236 2323 1.949525 CGATCCCAACCCATTCATGAC 59.050 52.381 0.00 0.00 0.00 3.06
2237 2324 2.310538 GATCCCAACCCATTCATGACC 58.689 52.381 0.00 0.00 0.00 4.02
2238 2325 0.034574 TCCCAACCCATTCATGACCG 60.035 55.000 0.00 0.00 0.00 4.79
2239 2326 1.666209 CCCAACCCATTCATGACCGC 61.666 60.000 0.00 0.00 0.00 5.68
2240 2327 1.666209 CCAACCCATTCATGACCGCC 61.666 60.000 0.00 0.00 0.00 6.13
2241 2328 1.379843 AACCCATTCATGACCGCCC 60.380 57.895 0.00 0.00 0.00 6.13
2242 2329 1.863155 AACCCATTCATGACCGCCCT 61.863 55.000 0.00 0.00 0.00 5.19
2243 2330 1.076777 CCCATTCATGACCGCCCTT 60.077 57.895 0.00 0.00 0.00 3.95
2244 2331 1.386525 CCCATTCATGACCGCCCTTG 61.387 60.000 0.00 0.00 0.00 3.61
2245 2332 1.434696 CATTCATGACCGCCCTTGC 59.565 57.895 0.00 0.00 0.00 4.01
2246 2333 1.001020 ATTCATGACCGCCCTTGCA 60.001 52.632 0.00 0.00 37.32 4.08
2247 2334 0.611618 ATTCATGACCGCCCTTGCAA 60.612 50.000 0.00 0.00 37.32 4.08
2248 2335 1.523154 TTCATGACCGCCCTTGCAAC 61.523 55.000 0.00 0.00 37.32 4.17
2249 2336 2.676471 ATGACCGCCCTTGCAACC 60.676 61.111 0.00 0.00 37.32 3.77
2250 2337 3.505790 ATGACCGCCCTTGCAACCA 62.506 57.895 0.00 0.00 37.32 3.67
2251 2338 2.909965 GACCGCCCTTGCAACCAA 60.910 61.111 0.00 0.00 37.32 3.67
2252 2339 2.443016 ACCGCCCTTGCAACCAAA 60.443 55.556 0.00 0.00 37.32 3.28
2253 2340 2.028925 CCGCCCTTGCAACCAAAC 59.971 61.111 0.00 0.00 37.32 2.93
2254 2341 2.354539 CGCCCTTGCAACCAAACG 60.355 61.111 0.00 0.00 37.32 3.60
2255 2342 2.661537 GCCCTTGCAACCAAACGC 60.662 61.111 0.00 0.00 37.47 4.84
2256 2343 2.811101 CCCTTGCAACCAAACGCA 59.189 55.556 0.00 0.00 36.05 5.24
2267 2354 1.971695 CAAACGCACCCCCTCCTTC 60.972 63.158 0.00 0.00 0.00 3.46
2301 2388 9.609346 TTTTCTCTTTAAAATATACTCCCTCCG 57.391 33.333 0.00 0.00 0.00 4.63
2302 2389 7.909485 TCTCTTTAAAATATACTCCCTCCGT 57.091 36.000 0.00 0.00 0.00 4.69
2303 2390 8.315220 TCTCTTTAAAATATACTCCCTCCGTT 57.685 34.615 0.00 0.00 0.00 4.44
2304 2391 8.419442 TCTCTTTAAAATATACTCCCTCCGTTC 58.581 37.037 0.00 0.00 0.00 3.95
2305 2392 7.503549 TCTTTAAAATATACTCCCTCCGTTCC 58.496 38.462 0.00 0.00 0.00 3.62
2306 2393 7.346436 TCTTTAAAATATACTCCCTCCGTTCCT 59.654 37.037 0.00 0.00 0.00 3.36
2307 2394 8.551682 TTTAAAATATACTCCCTCCGTTCCTA 57.448 34.615 0.00 0.00 0.00 2.94
2308 2395 8.551682 TTAAAATATACTCCCTCCGTTCCTAA 57.448 34.615 0.00 0.00 0.00 2.69
2309 2396 7.441903 AAAATATACTCCCTCCGTTCCTAAA 57.558 36.000 0.00 0.00 0.00 1.85
2310 2397 7.628501 AAATATACTCCCTCCGTTCCTAAAT 57.371 36.000 0.00 0.00 0.00 1.40
2311 2398 8.731591 AAATATACTCCCTCCGTTCCTAAATA 57.268 34.615 0.00 0.00 0.00 1.40
2312 2399 8.912614 AATATACTCCCTCCGTTCCTAAATAT 57.087 34.615 0.00 0.00 0.00 1.28
2315 2402 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
2316 2403 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
2317 2404 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
2318 2405 5.541484 TCCCTCCGTTCCTAAATATAAGTCC 59.459 44.000 0.00 0.00 0.00 3.85
2319 2406 5.543020 CCCTCCGTTCCTAAATATAAGTCCT 59.457 44.000 0.00 0.00 0.00 3.85
2320 2407 6.042897 CCCTCCGTTCCTAAATATAAGTCCTT 59.957 42.308 0.00 0.00 0.00 3.36
2321 2408 7.419865 CCCTCCGTTCCTAAATATAAGTCCTTT 60.420 40.741 0.00 0.00 0.00 3.11
2322 2409 7.991460 CCTCCGTTCCTAAATATAAGTCCTTTT 59.009 37.037 0.00 0.00 0.00 2.27
2335 2422 7.757242 ATAAGTCCTTTTAGAGATTCCACCT 57.243 36.000 0.00 0.00 0.00 4.00
2336 2423 6.455690 AAGTCCTTTTAGAGATTCCACCTT 57.544 37.500 0.00 0.00 0.00 3.50
2337 2424 5.810095 AGTCCTTTTAGAGATTCCACCTTG 58.190 41.667 0.00 0.00 0.00 3.61
2338 2425 4.944317 GTCCTTTTAGAGATTCCACCTTGG 59.056 45.833 0.00 0.00 39.43 3.61
2339 2426 4.849810 TCCTTTTAGAGATTCCACCTTGGA 59.150 41.667 0.00 0.00 46.61 3.53
2349 2436 2.104967 TCCACCTTGGACTACATACGG 58.895 52.381 0.00 0.00 42.67 4.02
2350 2437 2.104967 CCACCTTGGACTACATACGGA 58.895 52.381 0.00 0.00 40.96 4.69
2351 2438 2.100916 CCACCTTGGACTACATACGGAG 59.899 54.545 0.00 0.00 40.96 4.63
2352 2439 1.755380 ACCTTGGACTACATACGGAGC 59.245 52.381 0.00 0.00 0.00 4.70
2353 2440 1.754803 CCTTGGACTACATACGGAGCA 59.245 52.381 0.00 0.00 0.00 4.26
2354 2441 2.167693 CCTTGGACTACATACGGAGCAA 59.832 50.000 0.00 0.00 0.00 3.91
2355 2442 3.448686 CTTGGACTACATACGGAGCAAG 58.551 50.000 0.00 0.00 0.00 4.01
2356 2443 2.730382 TGGACTACATACGGAGCAAGA 58.270 47.619 0.00 0.00 0.00 3.02
2357 2444 3.296854 TGGACTACATACGGAGCAAGAT 58.703 45.455 0.00 0.00 0.00 2.40
2358 2445 3.068165 TGGACTACATACGGAGCAAGATG 59.932 47.826 0.00 0.00 0.00 2.90
2359 2446 3.318275 GGACTACATACGGAGCAAGATGA 59.682 47.826 0.00 0.00 0.00 2.92
2360 2447 4.202121 GGACTACATACGGAGCAAGATGAA 60.202 45.833 0.00 0.00 0.00 2.57
2361 2448 5.509840 GGACTACATACGGAGCAAGATGAAT 60.510 44.000 0.00 0.00 0.00 2.57
2362 2449 5.918608 ACTACATACGGAGCAAGATGAATT 58.081 37.500 0.00 0.00 0.00 2.17
2363 2450 7.050970 ACTACATACGGAGCAAGATGAATTA 57.949 36.000 0.00 0.00 0.00 1.40
2364 2451 7.497595 ACTACATACGGAGCAAGATGAATTAA 58.502 34.615 0.00 0.00 0.00 1.40
2365 2452 8.150945 ACTACATACGGAGCAAGATGAATTAAT 58.849 33.333 0.00 0.00 0.00 1.40
2366 2453 7.426929 ACATACGGAGCAAGATGAATTAATC 57.573 36.000 0.00 0.00 0.00 1.75
2367 2454 7.220030 ACATACGGAGCAAGATGAATTAATCT 58.780 34.615 0.00 0.00 38.59 2.40
2368 2455 8.367911 ACATACGGAGCAAGATGAATTAATCTA 58.632 33.333 5.69 0.00 35.83 1.98
2369 2456 8.651588 CATACGGAGCAAGATGAATTAATCTAC 58.348 37.037 5.69 2.14 35.83 2.59
2370 2457 6.582636 ACGGAGCAAGATGAATTAATCTACA 58.417 36.000 5.69 0.00 35.83 2.74
2371 2458 6.480320 ACGGAGCAAGATGAATTAATCTACAC 59.520 38.462 5.69 1.10 35.83 2.90
2372 2459 6.703607 CGGAGCAAGATGAATTAATCTACACT 59.296 38.462 5.69 4.14 35.83 3.55
2373 2460 7.225538 CGGAGCAAGATGAATTAATCTACACTT 59.774 37.037 5.69 0.00 35.83 3.16
2374 2461 8.897752 GGAGCAAGATGAATTAATCTACACTTT 58.102 33.333 5.69 0.00 35.83 2.66
2451 2538 9.453830 AGATTTATATTTAGGAACAGAGGGAGT 57.546 33.333 0.00 0.00 0.00 3.85
2454 2541 9.496710 TTTATATTTAGGAACAGAGGGAGTACA 57.503 33.333 0.00 0.00 0.00 2.90
2455 2542 5.678955 ATTTAGGAACAGAGGGAGTACAC 57.321 43.478 0.00 0.00 0.00 2.90
2456 2543 2.696526 AGGAACAGAGGGAGTACACA 57.303 50.000 0.00 0.00 0.00 3.72
2457 2544 3.191888 AGGAACAGAGGGAGTACACAT 57.808 47.619 0.00 0.00 0.00 3.21
2460 2547 3.260884 GGAACAGAGGGAGTACACATTCA 59.739 47.826 0.00 0.00 0.00 2.57
2481 2582 0.822532 CTGGGGCTCCATGCTTGATC 60.823 60.000 5.29 0.00 43.11 2.92
2485 2586 1.307097 GGCTCCATGCTTGATCTGAC 58.693 55.000 0.22 0.00 42.39 3.51
2486 2587 1.407851 GGCTCCATGCTTGATCTGACA 60.408 52.381 0.22 0.00 42.39 3.58
2508 2610 3.819920 CCTCTCGCGAGCAGCTCA 61.820 66.667 30.97 12.00 45.59 4.26
2615 2730 3.240606 CTGTCGTGGTTGCGCAAGG 62.241 63.158 25.78 13.28 38.28 3.61
2643 2758 2.174639 ACACAAGGTTCAGGTTGATCCA 59.825 45.455 8.44 0.00 38.42 3.41
2702 2817 1.253100 GTGGCCTTCAATTTTCCGGA 58.747 50.000 0.00 0.00 0.00 5.14
2764 2880 2.251818 CCGGGAGATATGGTCATGTCT 58.748 52.381 9.46 9.46 41.15 3.41
2797 2913 3.952628 CTCGGTGTCTTTCCGGGCC 62.953 68.421 0.00 0.00 46.82 5.80
2847 2967 3.964031 GTGACAGATGAAGGGAGATAGGT 59.036 47.826 0.00 0.00 0.00 3.08
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
365 366 0.752743 TGTTTGCTGGAGCTGCACTT 60.753 50.000 2.72 0.00 42.66 3.16
799 806 6.603599 AGAAGTTACCTGGAAAGATATTTGGC 59.396 38.462 0.00 0.00 0.00 4.52
803 810 6.122964 GGCAGAAGTTACCTGGAAAGATATT 58.877 40.000 0.00 0.00 32.51 1.28
804 811 5.191722 TGGCAGAAGTTACCTGGAAAGATAT 59.808 40.000 0.00 0.00 32.51 1.63
805 812 4.534500 TGGCAGAAGTTACCTGGAAAGATA 59.466 41.667 0.00 0.00 32.51 1.98
841 848 5.986501 TTGTTTTGTTTAGTTGGACAGGT 57.013 34.783 0.00 0.00 0.00 4.00
845 852 5.857517 TCACGTTTGTTTTGTTTAGTTGGAC 59.142 36.000 0.00 0.00 0.00 4.02
846 853 5.857517 GTCACGTTTGTTTTGTTTAGTTGGA 59.142 36.000 0.00 0.00 0.00 3.53
847 854 5.061187 GGTCACGTTTGTTTTGTTTAGTTGG 59.939 40.000 0.00 0.00 0.00 3.77
848 855 5.629849 TGGTCACGTTTGTTTTGTTTAGTTG 59.370 36.000 0.00 0.00 0.00 3.16
851 858 4.559643 GGTGGTCACGTTTGTTTTGTTTAG 59.440 41.667 0.00 0.00 0.00 1.85
852 859 4.483311 GGTGGTCACGTTTGTTTTGTTTA 58.517 39.130 0.00 0.00 0.00 2.01
857 867 0.179158 GCGGTGGTCACGTTTGTTTT 60.179 50.000 0.00 0.00 0.00 2.43
892 902 0.318762 GAGAAGAGCGACCTTGGTGT 59.681 55.000 0.00 0.00 0.00 4.16
977 991 3.700350 CCTGAGGGAGGGAGGGGT 61.700 72.222 0.00 0.00 38.36 4.95
988 1004 1.337260 CGAGGTTGTTGAGTCCTGAGG 60.337 57.143 0.00 0.00 0.00 3.86
990 1006 1.613925 CTCGAGGTTGTTGAGTCCTGA 59.386 52.381 3.91 0.00 32.40 3.86
1007 1023 2.353607 GGCGACTATCGTGGCTCG 60.354 66.667 1.94 1.94 43.44 5.03
1009 1025 3.122250 GACGGCGACTATCGTGGCT 62.122 63.158 16.62 0.00 43.44 4.75
1010 1026 2.654404 GACGGCGACTATCGTGGC 60.654 66.667 16.62 0.00 42.81 5.01
1296 1324 2.146061 GGAGGAGGAGATGCAGGGG 61.146 68.421 0.00 0.00 0.00 4.79
1324 1352 4.648626 GGCTGTGGAGGTGCTGCA 62.649 66.667 0.00 0.00 0.00 4.41
1377 1411 2.033236 CGTAAGAACAAAGAACTGCGCA 60.033 45.455 10.98 10.98 43.02 6.09
1380 1414 3.311596 ACCACGTAAGAACAAAGAACTGC 59.688 43.478 0.00 0.00 43.62 4.40
1389 1423 3.306919 GGGGACATAACCACGTAAGAACA 60.307 47.826 0.00 0.00 43.62 3.18
1400 1434 4.663334 AGAAAGAAACAGGGGACATAACC 58.337 43.478 0.00 0.00 0.00 2.85
1401 1435 6.490381 AGAAAGAAAGAAACAGGGGACATAAC 59.510 38.462 0.00 0.00 0.00 1.89
1403 1437 6.200878 AGAAAGAAAGAAACAGGGGACATA 57.799 37.500 0.00 0.00 0.00 2.29
1404 1438 5.066913 AGAAAGAAAGAAACAGGGGACAT 57.933 39.130 0.00 0.00 0.00 3.06
1408 1445 5.351458 CACAAAGAAAGAAAGAAACAGGGG 58.649 41.667 0.00 0.00 0.00 4.79
1656 1705 1.445871 GAGGTTAATTGACGCCGGTT 58.554 50.000 1.90 0.00 0.00 4.44
1674 1723 4.717233 TGTAGTAAGGATTAAACGGCGA 57.283 40.909 16.62 0.00 28.70 5.54
1684 1734 5.251700 GGGATGGAATGGATGTAGTAAGGAT 59.748 44.000 0.00 0.00 0.00 3.24
1685 1735 4.597507 GGGATGGAATGGATGTAGTAAGGA 59.402 45.833 0.00 0.00 0.00 3.36
1686 1736 4.263506 GGGGATGGAATGGATGTAGTAAGG 60.264 50.000 0.00 0.00 0.00 2.69
1687 1737 4.563580 CGGGGATGGAATGGATGTAGTAAG 60.564 50.000 0.00 0.00 0.00 2.34
1688 1738 3.326588 CGGGGATGGAATGGATGTAGTAA 59.673 47.826 0.00 0.00 0.00 2.24
1689 1739 2.903784 CGGGGATGGAATGGATGTAGTA 59.096 50.000 0.00 0.00 0.00 1.82
1690 1740 1.699634 CGGGGATGGAATGGATGTAGT 59.300 52.381 0.00 0.00 0.00 2.73
1691 1741 1.699634 ACGGGGATGGAATGGATGTAG 59.300 52.381 0.00 0.00 0.00 2.74
1692 1742 1.697432 GACGGGGATGGAATGGATGTA 59.303 52.381 0.00 0.00 0.00 2.29
1693 1743 0.474184 GACGGGGATGGAATGGATGT 59.526 55.000 0.00 0.00 0.00 3.06
1694 1744 0.767375 AGACGGGGATGGAATGGATG 59.233 55.000 0.00 0.00 0.00 3.51
1701 1751 0.754217 CGGACTAAGACGGGGATGGA 60.754 60.000 0.00 0.00 0.00 3.41
1745 1795 4.201589 CGACGACGCTAATGAACAAGAAAT 60.202 41.667 0.00 0.00 0.00 2.17
1811 1862 3.260483 CACAGATCGCTCGCCTGC 61.260 66.667 9.95 0.00 0.00 4.85
1813 1864 2.182791 CACACAGATCGCTCGCCT 59.817 61.111 0.00 0.00 0.00 5.52
1814 1865 2.887568 CCACACAGATCGCTCGCC 60.888 66.667 0.00 0.00 0.00 5.54
1877 1935 4.233729 TGGCTACTTACCCGGGTATAAAT 58.766 43.478 33.58 20.29 0.00 1.40
1881 1939 2.179377 TTGGCTACTTACCCGGGTAT 57.821 50.000 33.58 22.11 0.00 2.73
1886 1944 3.139077 GGATCAATTGGCTACTTACCCG 58.861 50.000 5.42 0.00 0.00 5.28
1916 1975 3.003394 AGATCAATTGGCAACGATCCA 57.997 42.857 26.11 0.00 40.96 3.41
1919 1978 4.422073 TCCTAGATCAATTGGCAACGAT 57.578 40.909 12.43 12.43 45.01 3.73
1922 1981 3.304257 CGCATCCTAGATCAATTGGCAAC 60.304 47.826 0.00 0.00 0.00 4.17
1927 1986 4.336433 ACCAAACGCATCCTAGATCAATTG 59.664 41.667 0.00 0.00 0.00 2.32
1928 1987 4.526970 ACCAAACGCATCCTAGATCAATT 58.473 39.130 0.00 0.00 0.00 2.32
1929 1988 4.156455 ACCAAACGCATCCTAGATCAAT 57.844 40.909 0.00 0.00 0.00 2.57
1930 1989 3.627395 ACCAAACGCATCCTAGATCAA 57.373 42.857 0.00 0.00 0.00 2.57
1932 1991 3.531538 TCAACCAAACGCATCCTAGATC 58.468 45.455 0.00 0.00 0.00 2.75
1933 1992 3.627395 TCAACCAAACGCATCCTAGAT 57.373 42.857 0.00 0.00 0.00 1.98
1935 1994 2.420022 CCTTCAACCAAACGCATCCTAG 59.580 50.000 0.00 0.00 0.00 3.02
1936 1995 2.224670 ACCTTCAACCAAACGCATCCTA 60.225 45.455 0.00 0.00 0.00 2.94
1937 1996 1.247567 CCTTCAACCAAACGCATCCT 58.752 50.000 0.00 0.00 0.00 3.24
1938 1997 0.958822 ACCTTCAACCAAACGCATCC 59.041 50.000 0.00 0.00 0.00 3.51
1942 2001 0.316689 CGACACCTTCAACCAAACGC 60.317 55.000 0.00 0.00 0.00 4.84
1943 2002 1.011333 ACGACACCTTCAACCAAACG 58.989 50.000 0.00 0.00 0.00 3.60
1944 2003 3.810941 TCATACGACACCTTCAACCAAAC 59.189 43.478 0.00 0.00 0.00 2.93
1945 2004 4.074627 TCATACGACACCTTCAACCAAA 57.925 40.909 0.00 0.00 0.00 3.28
1947 2006 3.755112 TTCATACGACACCTTCAACCA 57.245 42.857 0.00 0.00 0.00 3.67
1949 2008 3.374058 CCCATTCATACGACACCTTCAAC 59.626 47.826 0.00 0.00 0.00 3.18
1951 2010 2.569853 ACCCATTCATACGACACCTTCA 59.430 45.455 0.00 0.00 0.00 3.02
1953 2012 3.343617 CAACCCATTCATACGACACCTT 58.656 45.455 0.00 0.00 0.00 3.50
1954 2013 2.355716 CCAACCCATTCATACGACACCT 60.356 50.000 0.00 0.00 0.00 4.00
1955 2014 2.014128 CCAACCCATTCATACGACACC 58.986 52.381 0.00 0.00 0.00 4.16
1956 2015 2.980568 TCCAACCCATTCATACGACAC 58.019 47.619 0.00 0.00 0.00 3.67
1957 2016 3.340034 GTTCCAACCCATTCATACGACA 58.660 45.455 0.00 0.00 0.00 4.35
1960 2019 1.668751 CGGTTCCAACCCATTCATACG 59.331 52.381 2.78 0.00 46.53 3.06
1962 2021 3.443145 AACGGTTCCAACCCATTCATA 57.557 42.857 2.78 0.00 46.53 2.15
1963 2022 2.302587 AACGGTTCCAACCCATTCAT 57.697 45.000 2.78 0.00 46.53 2.57
1965 2024 4.794278 ATTAAACGGTTCCAACCCATTC 57.206 40.909 2.78 0.00 46.53 2.67
1966 2025 5.554437 AAATTAAACGGTTCCAACCCATT 57.446 34.783 2.78 1.51 46.53 3.16
1967 2026 5.554437 AAAATTAAACGGTTCCAACCCAT 57.446 34.783 2.78 0.00 46.53 4.00
1968 2027 5.354842 AAAAATTAAACGGTTCCAACCCA 57.645 34.783 2.78 0.00 46.53 4.51
1998 2085 5.990386 CCAAACACATGAATTGAATGGTTCA 59.010 36.000 0.00 0.00 38.57 3.18
1999 2086 5.106987 GCCAAACACATGAATTGAATGGTTC 60.107 40.000 0.00 0.00 0.00 3.62
2000 2087 4.756135 GCCAAACACATGAATTGAATGGTT 59.244 37.500 0.00 0.00 0.00 3.67
2001 2088 4.040706 AGCCAAACACATGAATTGAATGGT 59.959 37.500 0.00 0.00 0.00 3.55
2002 2089 4.390603 CAGCCAAACACATGAATTGAATGG 59.609 41.667 0.00 3.30 0.00 3.16
2003 2090 5.231702 TCAGCCAAACACATGAATTGAATG 58.768 37.500 0.00 4.33 0.00 2.67
2004 2091 5.471556 TCAGCCAAACACATGAATTGAAT 57.528 34.783 0.00 0.00 0.00 2.57
2005 2092 4.933505 TCAGCCAAACACATGAATTGAA 57.066 36.364 0.00 0.00 0.00 2.69
2006 2093 4.933505 TTCAGCCAAACACATGAATTGA 57.066 36.364 0.00 0.00 0.00 2.57
2007 2094 8.929827 TTATATTCAGCCAAACACATGAATTG 57.070 30.769 0.00 1.27 41.38 2.32
2008 2095 8.752187 ACTTATATTCAGCCAAACACATGAATT 58.248 29.630 0.00 0.00 41.38 2.17
2009 2096 8.192774 CACTTATATTCAGCCAAACACATGAAT 58.807 33.333 0.00 4.83 43.08 2.57
2010 2097 7.362834 CCACTTATATTCAGCCAAACACATGAA 60.363 37.037 0.00 0.00 36.22 2.57
2011 2098 6.095300 CCACTTATATTCAGCCAAACACATGA 59.905 38.462 0.00 0.00 0.00 3.07
2012 2099 6.127647 ACCACTTATATTCAGCCAAACACATG 60.128 38.462 0.00 0.00 0.00 3.21
2013 2100 5.951747 ACCACTTATATTCAGCCAAACACAT 59.048 36.000 0.00 0.00 0.00 3.21
2014 2101 5.182950 CACCACTTATATTCAGCCAAACACA 59.817 40.000 0.00 0.00 0.00 3.72
2015 2102 5.414454 TCACCACTTATATTCAGCCAAACAC 59.586 40.000 0.00 0.00 0.00 3.32
2016 2103 5.565509 TCACCACTTATATTCAGCCAAACA 58.434 37.500 0.00 0.00 0.00 2.83
2017 2104 5.449177 GCTCACCACTTATATTCAGCCAAAC 60.449 44.000 0.00 0.00 0.00 2.93
2018 2105 4.640201 GCTCACCACTTATATTCAGCCAAA 59.360 41.667 0.00 0.00 0.00 3.28
2019 2106 4.080356 AGCTCACCACTTATATTCAGCCAA 60.080 41.667 0.00 0.00 0.00 4.52
2020 2107 3.455910 AGCTCACCACTTATATTCAGCCA 59.544 43.478 0.00 0.00 0.00 4.75
2021 2108 4.078639 AGCTCACCACTTATATTCAGCC 57.921 45.455 0.00 0.00 0.00 4.85
2022 2109 7.736447 AATTAGCTCACCACTTATATTCAGC 57.264 36.000 0.00 0.00 0.00 4.26
2029 2116 9.780186 GTCCTAAATAATTAGCTCACCACTTAT 57.220 33.333 0.00 0.00 37.74 1.73
2030 2117 7.924412 CGTCCTAAATAATTAGCTCACCACTTA 59.076 37.037 0.00 0.00 37.74 2.24
2031 2118 6.761714 CGTCCTAAATAATTAGCTCACCACTT 59.238 38.462 0.00 0.00 37.74 3.16
2032 2119 6.281405 CGTCCTAAATAATTAGCTCACCACT 58.719 40.000 0.00 0.00 37.74 4.00
2033 2120 5.465724 CCGTCCTAAATAATTAGCTCACCAC 59.534 44.000 0.00 0.00 37.74 4.16
2034 2121 5.454187 CCCGTCCTAAATAATTAGCTCACCA 60.454 44.000 0.00 0.00 37.74 4.17
2035 2122 4.995487 CCCGTCCTAAATAATTAGCTCACC 59.005 45.833 0.00 0.00 37.74 4.02
2036 2123 5.695363 GTCCCGTCCTAAATAATTAGCTCAC 59.305 44.000 0.00 0.00 37.74 3.51
2037 2124 5.221581 GGTCCCGTCCTAAATAATTAGCTCA 60.222 44.000 0.00 0.00 37.74 4.26
2038 2125 5.221581 TGGTCCCGTCCTAAATAATTAGCTC 60.222 44.000 0.00 0.00 37.74 4.09
2039 2126 4.657039 TGGTCCCGTCCTAAATAATTAGCT 59.343 41.667 0.00 0.00 37.74 3.32
2040 2127 4.753610 GTGGTCCCGTCCTAAATAATTAGC 59.246 45.833 0.00 0.00 37.74 3.09
2041 2128 5.163280 TGGTGGTCCCGTCCTAAATAATTAG 60.163 44.000 0.00 0.00 36.05 1.73
2042 2129 4.720773 TGGTGGTCCCGTCCTAAATAATTA 59.279 41.667 0.00 0.00 35.15 1.40
2043 2130 3.524380 TGGTGGTCCCGTCCTAAATAATT 59.476 43.478 0.00 0.00 35.15 1.40
2044 2131 3.116959 TGGTGGTCCCGTCCTAAATAAT 58.883 45.455 0.00 0.00 35.15 1.28
2045 2132 2.502538 CTGGTGGTCCCGTCCTAAATAA 59.497 50.000 0.00 0.00 35.15 1.40
2046 2133 2.112998 CTGGTGGTCCCGTCCTAAATA 58.887 52.381 0.00 0.00 35.15 1.40
2047 2134 0.909623 CTGGTGGTCCCGTCCTAAAT 59.090 55.000 0.00 0.00 35.15 1.40
2048 2135 0.472352 ACTGGTGGTCCCGTCCTAAA 60.472 55.000 0.00 0.00 35.15 1.85
2049 2136 0.901580 GACTGGTGGTCCCGTCCTAA 60.902 60.000 0.00 0.00 40.51 2.69
2050 2137 1.304713 GACTGGTGGTCCCGTCCTA 60.305 63.158 0.00 0.00 40.51 2.94
2051 2138 2.603776 GACTGGTGGTCCCGTCCT 60.604 66.667 0.00 0.00 40.51 3.85
2052 2139 2.291043 ATGACTGGTGGTCCCGTCC 61.291 63.158 6.41 0.00 43.99 4.79
2053 2140 1.079127 CATGACTGGTGGTCCCGTC 60.079 63.158 0.00 2.67 44.58 4.79
2054 2141 3.068881 CATGACTGGTGGTCCCGT 58.931 61.111 0.00 0.00 43.89 5.28
2055 2142 2.436646 GCATGACTGGTGGTCCCG 60.437 66.667 0.00 0.00 43.89 5.14
2056 2143 1.078143 GAGCATGACTGGTGGTCCC 60.078 63.158 0.00 0.00 43.89 4.46
2057 2144 0.674895 GTGAGCATGACTGGTGGTCC 60.675 60.000 0.00 0.00 43.89 4.46
2058 2145 0.035317 TGTGAGCATGACTGGTGGTC 59.965 55.000 0.00 0.00 44.70 4.02
2059 2146 0.694771 ATGTGAGCATGACTGGTGGT 59.305 50.000 0.00 0.00 33.37 4.16
2060 2147 2.093288 ACTATGTGAGCATGACTGGTGG 60.093 50.000 0.00 0.00 36.58 4.61
2061 2148 3.193263 GACTATGTGAGCATGACTGGTG 58.807 50.000 0.00 0.00 36.58 4.17
2062 2149 2.833943 TGACTATGTGAGCATGACTGGT 59.166 45.455 0.00 0.00 36.58 4.00
2063 2150 3.531934 TGACTATGTGAGCATGACTGG 57.468 47.619 0.00 0.00 36.58 4.00
2064 2151 3.247886 GCATGACTATGTGAGCATGACTG 59.752 47.826 0.00 0.00 39.82 3.51
2065 2152 3.118519 TGCATGACTATGTGAGCATGACT 60.119 43.478 0.00 0.00 39.82 3.41
2066 2153 3.200483 TGCATGACTATGTGAGCATGAC 58.800 45.455 0.00 0.00 39.82 3.06
2067 2154 3.547054 TGCATGACTATGTGAGCATGA 57.453 42.857 0.00 0.00 39.82 3.07
2069 2156 2.552743 GCATGCATGACTATGTGAGCAT 59.447 45.455 30.64 0.00 42.82 3.79
2070 2157 1.944709 GCATGCATGACTATGTGAGCA 59.055 47.619 30.64 0.00 36.65 4.26
2071 2158 1.944709 TGCATGCATGACTATGTGAGC 59.055 47.619 30.64 10.98 36.65 4.26
2072 2159 4.497507 CCTTTGCATGCATGACTATGTGAG 60.498 45.833 30.64 13.72 36.65 3.51
2073 2160 3.379057 CCTTTGCATGCATGACTATGTGA 59.621 43.478 30.64 0.00 36.65 3.58
2074 2161 3.490249 CCCTTTGCATGCATGACTATGTG 60.490 47.826 30.64 10.85 36.65 3.21
2075 2162 2.691526 CCCTTTGCATGCATGACTATGT 59.308 45.455 30.64 0.00 36.65 2.29
2076 2163 2.691526 ACCCTTTGCATGCATGACTATG 59.308 45.455 30.64 17.48 37.36 2.23
2077 2164 2.691526 CACCCTTTGCATGCATGACTAT 59.308 45.455 30.64 3.00 0.00 2.12
2078 2165 2.093890 CACCCTTTGCATGCATGACTA 58.906 47.619 30.64 14.85 0.00 2.59
2079 2166 0.892755 CACCCTTTGCATGCATGACT 59.107 50.000 30.64 0.05 0.00 3.41
2080 2167 0.108520 CCACCCTTTGCATGCATGAC 60.109 55.000 30.64 20.41 0.00 3.06
2081 2168 1.890625 GCCACCCTTTGCATGCATGA 61.891 55.000 30.64 12.55 0.00 3.07
2082 2169 1.448893 GCCACCCTTTGCATGCATG 60.449 57.895 23.37 22.70 0.00 4.06
2083 2170 2.662070 GGCCACCCTTTGCATGCAT 61.662 57.895 23.37 2.36 0.00 3.96
2084 2171 3.312718 GGCCACCCTTTGCATGCA 61.313 61.111 18.46 18.46 0.00 3.96
2085 2172 2.187896 AATGGCCACCCTTTGCATGC 62.188 55.000 8.16 11.82 0.00 4.06
2086 2173 0.325602 AAATGGCCACCCTTTGCATG 59.674 50.000 8.16 0.00 0.00 4.06
2087 2174 0.325602 CAAATGGCCACCCTTTGCAT 59.674 50.000 8.16 0.00 0.00 3.96
2088 2175 0.762082 TCAAATGGCCACCCTTTGCA 60.762 50.000 20.77 10.39 33.24 4.08
2089 2176 0.614812 ATCAAATGGCCACCCTTTGC 59.385 50.000 20.77 0.00 33.24 3.68
2090 2177 2.674747 CGAATCAAATGGCCACCCTTTG 60.675 50.000 19.88 19.88 33.89 2.77
2091 2178 1.550072 CGAATCAAATGGCCACCCTTT 59.450 47.619 8.16 1.16 0.00 3.11
2092 2179 1.185315 CGAATCAAATGGCCACCCTT 58.815 50.000 8.16 0.00 0.00 3.95
2093 2180 0.331278 TCGAATCAAATGGCCACCCT 59.669 50.000 8.16 0.00 0.00 4.34
2094 2181 0.455815 GTCGAATCAAATGGCCACCC 59.544 55.000 8.16 0.00 0.00 4.61
2095 2182 0.455815 GGTCGAATCAAATGGCCACC 59.544 55.000 8.16 0.00 0.00 4.61
2096 2183 0.098728 CGGTCGAATCAAATGGCCAC 59.901 55.000 8.16 0.00 0.00 5.01
2097 2184 0.035915 TCGGTCGAATCAAATGGCCA 60.036 50.000 8.56 8.56 0.00 5.36
2098 2185 1.308998 ATCGGTCGAATCAAATGGCC 58.691 50.000 0.00 0.00 0.00 5.36
2099 2186 3.108144 CAAATCGGTCGAATCAAATGGC 58.892 45.455 0.00 0.00 0.00 4.40
2100 2187 3.694734 CCAAATCGGTCGAATCAAATGG 58.305 45.455 0.00 0.00 0.00 3.16
2113 2200 0.601057 GTTCCACCCAACCAAATCGG 59.399 55.000 0.00 0.00 42.50 4.18
2114 2201 0.239879 CGTTCCACCCAACCAAATCG 59.760 55.000 0.00 0.00 0.00 3.34
2115 2202 0.601057 CCGTTCCACCCAACCAAATC 59.399 55.000 0.00 0.00 0.00 2.17
2116 2203 0.105913 ACCGTTCCACCCAACCAAAT 60.106 50.000 0.00 0.00 0.00 2.32
2117 2204 0.324460 AACCGTTCCACCCAACCAAA 60.324 50.000 0.00 0.00 0.00 3.28
2118 2205 0.752376 GAACCGTTCCACCCAACCAA 60.752 55.000 0.00 0.00 0.00 3.67
2119 2206 1.152922 GAACCGTTCCACCCAACCA 60.153 57.895 0.00 0.00 0.00 3.67
2120 2207 1.152922 TGAACCGTTCCACCCAACC 60.153 57.895 8.80 0.00 0.00 3.77
2121 2208 1.792118 GCTGAACCGTTCCACCCAAC 61.792 60.000 8.80 0.00 0.00 3.77
2122 2209 1.527380 GCTGAACCGTTCCACCCAA 60.527 57.895 8.80 0.00 0.00 4.12
2123 2210 2.063015 ATGCTGAACCGTTCCACCCA 62.063 55.000 8.80 1.59 0.00 4.51
2124 2211 1.303317 ATGCTGAACCGTTCCACCC 60.303 57.895 8.80 0.00 0.00 4.61
2125 2212 0.321653 AGATGCTGAACCGTTCCACC 60.322 55.000 8.80 0.00 0.00 4.61
2126 2213 1.464997 GAAGATGCTGAACCGTTCCAC 59.535 52.381 8.80 1.68 0.00 4.02
2127 2214 1.071542 TGAAGATGCTGAACCGTTCCA 59.928 47.619 8.80 1.07 0.00 3.53
2128 2215 1.808411 TGAAGATGCTGAACCGTTCC 58.192 50.000 8.80 0.00 0.00 3.62
2129 2216 2.096496 CCATGAAGATGCTGAACCGTTC 59.904 50.000 4.18 4.18 0.00 3.95
2130 2217 2.086869 CCATGAAGATGCTGAACCGTT 58.913 47.619 0.00 0.00 0.00 4.44
2131 2218 1.742761 CCATGAAGATGCTGAACCGT 58.257 50.000 0.00 0.00 0.00 4.83
2132 2219 0.379669 GCCATGAAGATGCTGAACCG 59.620 55.000 0.00 0.00 0.00 4.44
2133 2220 1.466856 TGCCATGAAGATGCTGAACC 58.533 50.000 0.00 0.00 0.00 3.62
2134 2221 5.241064 AGAATATGCCATGAAGATGCTGAAC 59.759 40.000 0.00 0.00 0.00 3.18
2135 2222 5.382616 AGAATATGCCATGAAGATGCTGAA 58.617 37.500 0.00 0.00 0.00 3.02
2136 2223 4.981812 AGAATATGCCATGAAGATGCTGA 58.018 39.130 0.00 0.00 0.00 4.26
2137 2224 5.004448 AGAGAATATGCCATGAAGATGCTG 58.996 41.667 0.00 0.00 0.00 4.41
2138 2225 5.244189 AGAGAATATGCCATGAAGATGCT 57.756 39.130 0.00 0.00 0.00 3.79
2139 2226 5.961396 AAGAGAATATGCCATGAAGATGC 57.039 39.130 0.00 0.00 0.00 3.91
2140 2227 7.747155 AGAAAGAGAATATGCCATGAAGATG 57.253 36.000 0.00 0.00 0.00 2.90
2141 2228 8.630917 CAAAGAAAGAGAATATGCCATGAAGAT 58.369 33.333 0.00 0.00 0.00 2.40
2142 2229 7.067859 CCAAAGAAAGAGAATATGCCATGAAGA 59.932 37.037 0.00 0.00 0.00 2.87
2143 2230 7.201145 CCAAAGAAAGAGAATATGCCATGAAG 58.799 38.462 0.00 0.00 0.00 3.02
2144 2231 6.406177 GCCAAAGAAAGAGAATATGCCATGAA 60.406 38.462 0.00 0.00 0.00 2.57
2145 2232 5.068198 GCCAAAGAAAGAGAATATGCCATGA 59.932 40.000 0.00 0.00 0.00 3.07
2146 2233 5.068723 AGCCAAAGAAAGAGAATATGCCATG 59.931 40.000 0.00 0.00 0.00 3.66
2147 2234 5.206587 AGCCAAAGAAAGAGAATATGCCAT 58.793 37.500 0.00 0.00 0.00 4.40
2148 2235 4.603131 AGCCAAAGAAAGAGAATATGCCA 58.397 39.130 0.00 0.00 0.00 4.92
2149 2236 4.260948 CGAGCCAAAGAAAGAGAATATGCC 60.261 45.833 0.00 0.00 0.00 4.40
2150 2237 4.572389 TCGAGCCAAAGAAAGAGAATATGC 59.428 41.667 0.00 0.00 0.00 3.14
2151 2238 6.457528 GGTTCGAGCCAAAGAAAGAGAATATG 60.458 42.308 14.14 0.00 0.00 1.78
2152 2239 5.586643 GGTTCGAGCCAAAGAAAGAGAATAT 59.413 40.000 14.14 0.00 0.00 1.28
2153 2240 4.935808 GGTTCGAGCCAAAGAAAGAGAATA 59.064 41.667 14.14 0.00 0.00 1.75
2154 2241 3.753797 GGTTCGAGCCAAAGAAAGAGAAT 59.246 43.478 14.14 0.00 0.00 2.40
2155 2242 3.139077 GGTTCGAGCCAAAGAAAGAGAA 58.861 45.455 14.14 0.00 0.00 2.87
2156 2243 2.104111 TGGTTCGAGCCAAAGAAAGAGA 59.896 45.455 19.64 0.00 35.25 3.10
2157 2244 2.494059 TGGTTCGAGCCAAAGAAAGAG 58.506 47.619 19.64 0.00 35.25 2.85
2158 2245 2.631160 TGGTTCGAGCCAAAGAAAGA 57.369 45.000 19.64 0.00 35.25 2.52
2159 2246 3.253188 TGAATGGTTCGAGCCAAAGAAAG 59.747 43.478 25.48 0.00 42.48 2.62
2160 2247 3.218453 TGAATGGTTCGAGCCAAAGAAA 58.782 40.909 25.48 6.75 42.48 2.52
2161 2248 2.857483 TGAATGGTTCGAGCCAAAGAA 58.143 42.857 25.48 8.53 42.48 2.52
2162 2249 2.559698 TGAATGGTTCGAGCCAAAGA 57.440 45.000 25.48 8.64 42.48 2.52
2163 2250 2.489329 ACATGAATGGTTCGAGCCAAAG 59.511 45.455 25.48 14.58 42.48 2.77
2164 2251 2.228582 CACATGAATGGTTCGAGCCAAA 59.771 45.455 25.48 13.95 42.48 3.28
2165 2252 1.811965 CACATGAATGGTTCGAGCCAA 59.188 47.619 25.48 9.47 42.48 4.52
2166 2253 1.452110 CACATGAATGGTTCGAGCCA 58.548 50.000 23.98 23.98 43.48 4.75
2167 2254 0.099436 GCACATGAATGGTTCGAGCC 59.901 55.000 11.99 11.99 0.00 4.70
2168 2255 1.089920 AGCACATGAATGGTTCGAGC 58.910 50.000 0.00 0.00 0.00 5.03
2169 2256 3.837213 AAAGCACATGAATGGTTCGAG 57.163 42.857 0.00 0.00 39.32 4.04
2170 2257 6.183360 GGTTATAAAGCACATGAATGGTTCGA 60.183 38.462 0.00 0.00 39.32 3.71
2171 2258 5.971202 GGTTATAAAGCACATGAATGGTTCG 59.029 40.000 0.00 0.00 39.32 3.95
2172 2259 6.862209 TGGTTATAAAGCACATGAATGGTTC 58.138 36.000 0.00 0.00 39.32 3.62
2173 2260 6.849085 TGGTTATAAAGCACATGAATGGTT 57.151 33.333 0.00 0.00 41.95 3.67
2174 2261 6.849085 TTGGTTATAAAGCACATGAATGGT 57.151 33.333 0.00 0.00 38.84 3.55
2175 2262 7.095910 TGTTTGGTTATAAAGCACATGAATGG 58.904 34.615 0.00 0.00 38.84 3.16
2176 2263 8.597227 CATGTTTGGTTATAAAGCACATGAATG 58.403 33.333 16.31 0.00 41.79 2.67
2177 2264 8.313292 ACATGTTTGGTTATAAAGCACATGAAT 58.687 29.630 22.73 8.91 41.79 2.57
2178 2265 7.665690 ACATGTTTGGTTATAAAGCACATGAA 58.334 30.769 22.73 1.35 41.79 2.57
2179 2266 7.176515 AGACATGTTTGGTTATAAAGCACATGA 59.823 33.333 22.73 0.00 41.79 3.07
2180 2267 7.315142 AGACATGTTTGGTTATAAAGCACATG 58.685 34.615 18.14 18.14 43.36 3.21
2181 2268 7.466746 AGACATGTTTGGTTATAAAGCACAT 57.533 32.000 0.00 0.00 38.84 3.21
2182 2269 6.892658 AGACATGTTTGGTTATAAAGCACA 57.107 33.333 0.00 0.00 38.84 4.57
2183 2270 9.855021 AAATAGACATGTTTGGTTATAAAGCAC 57.145 29.630 0.00 0.00 38.84 4.40
2191 2278 8.286800 CGTTCAGAAAATAGACATGTTTGGTTA 58.713 33.333 0.00 0.00 0.00 2.85
2192 2279 7.012894 TCGTTCAGAAAATAGACATGTTTGGTT 59.987 33.333 0.00 0.00 0.00 3.67
2193 2280 6.485313 TCGTTCAGAAAATAGACATGTTTGGT 59.515 34.615 0.00 0.00 0.00 3.67
2194 2281 6.898041 TCGTTCAGAAAATAGACATGTTTGG 58.102 36.000 0.00 0.00 0.00 3.28
2195 2282 7.693951 GGATCGTTCAGAAAATAGACATGTTTG 59.306 37.037 0.00 0.00 0.00 2.93
2196 2283 7.148239 GGGATCGTTCAGAAAATAGACATGTTT 60.148 37.037 0.00 0.00 0.00 2.83
2197 2284 6.316390 GGGATCGTTCAGAAAATAGACATGTT 59.684 38.462 0.00 0.00 0.00 2.71
2198 2285 5.817816 GGGATCGTTCAGAAAATAGACATGT 59.182 40.000 0.00 0.00 0.00 3.21
2199 2286 5.817296 TGGGATCGTTCAGAAAATAGACATG 59.183 40.000 0.00 0.00 0.00 3.21
2200 2287 5.989477 TGGGATCGTTCAGAAAATAGACAT 58.011 37.500 0.00 0.00 0.00 3.06
2201 2288 5.414789 TGGGATCGTTCAGAAAATAGACA 57.585 39.130 0.00 0.00 0.00 3.41
2202 2289 5.064834 GGTTGGGATCGTTCAGAAAATAGAC 59.935 44.000 0.00 0.00 0.00 2.59
2203 2290 5.183228 GGTTGGGATCGTTCAGAAAATAGA 58.817 41.667 0.00 0.00 0.00 1.98
2204 2291 4.335594 GGGTTGGGATCGTTCAGAAAATAG 59.664 45.833 0.00 0.00 0.00 1.73
2205 2292 4.263550 TGGGTTGGGATCGTTCAGAAAATA 60.264 41.667 0.00 0.00 0.00 1.40
2206 2293 3.089284 GGGTTGGGATCGTTCAGAAAAT 58.911 45.455 0.00 0.00 0.00 1.82
2207 2294 2.158593 TGGGTTGGGATCGTTCAGAAAA 60.159 45.455 0.00 0.00 0.00 2.29
2208 2295 1.422024 TGGGTTGGGATCGTTCAGAAA 59.578 47.619 0.00 0.00 0.00 2.52
2209 2296 1.060729 TGGGTTGGGATCGTTCAGAA 58.939 50.000 0.00 0.00 0.00 3.02
2210 2297 1.285280 ATGGGTTGGGATCGTTCAGA 58.715 50.000 0.00 0.00 0.00 3.27
2211 2298 2.017049 GAATGGGTTGGGATCGTTCAG 58.983 52.381 0.00 0.00 0.00 3.02
2212 2299 1.352687 TGAATGGGTTGGGATCGTTCA 59.647 47.619 0.00 0.00 35.03 3.18
2213 2300 2.122783 TGAATGGGTTGGGATCGTTC 57.877 50.000 0.00 0.00 0.00 3.95
2214 2301 2.025416 TCATGAATGGGTTGGGATCGTT 60.025 45.455 0.00 0.00 0.00 3.85
2215 2302 1.563879 TCATGAATGGGTTGGGATCGT 59.436 47.619 0.00 0.00 0.00 3.73
2216 2303 1.949525 GTCATGAATGGGTTGGGATCG 59.050 52.381 0.00 0.00 0.00 3.69
2217 2304 2.310538 GGTCATGAATGGGTTGGGATC 58.689 52.381 0.00 0.00 0.00 3.36
2218 2305 1.410083 CGGTCATGAATGGGTTGGGAT 60.410 52.381 0.00 0.00 0.00 3.85
2219 2306 0.034574 CGGTCATGAATGGGTTGGGA 60.035 55.000 0.00 0.00 0.00 4.37
2220 2307 1.666209 GCGGTCATGAATGGGTTGGG 61.666 60.000 0.00 0.00 0.00 4.12
2221 2308 1.666209 GGCGGTCATGAATGGGTTGG 61.666 60.000 0.00 0.00 0.00 3.77
2222 2309 1.666209 GGGCGGTCATGAATGGGTTG 61.666 60.000 0.00 0.00 0.00 3.77
2223 2310 1.379843 GGGCGGTCATGAATGGGTT 60.380 57.895 0.00 0.00 0.00 4.11
2224 2311 1.863155 AAGGGCGGTCATGAATGGGT 61.863 55.000 0.00 0.00 0.00 4.51
2225 2312 1.076777 AAGGGCGGTCATGAATGGG 60.077 57.895 0.00 0.00 0.00 4.00
2226 2313 2.008268 GCAAGGGCGGTCATGAATGG 62.008 60.000 0.00 0.00 0.00 3.16
2227 2314 1.314534 TGCAAGGGCGGTCATGAATG 61.315 55.000 0.00 0.00 45.35 2.67
2228 2315 0.611618 TTGCAAGGGCGGTCATGAAT 60.612 50.000 0.00 0.00 45.35 2.57
2229 2316 1.228398 TTGCAAGGGCGGTCATGAA 60.228 52.632 0.00 0.00 45.35 2.57
2230 2317 1.971167 GTTGCAAGGGCGGTCATGA 60.971 57.895 0.00 0.00 45.35 3.07
2231 2318 2.568090 GTTGCAAGGGCGGTCATG 59.432 61.111 0.00 0.00 45.35 3.07
2232 2319 2.676471 GGTTGCAAGGGCGGTCAT 60.676 61.111 0.00 0.00 45.35 3.06
2233 2320 3.723097 TTGGTTGCAAGGGCGGTCA 62.723 57.895 0.00 0.00 45.35 4.02
2234 2321 2.494530 TTTGGTTGCAAGGGCGGTC 61.495 57.895 0.00 0.00 45.35 4.79
2235 2322 2.443016 TTTGGTTGCAAGGGCGGT 60.443 55.556 0.00 0.00 45.35 5.68
2236 2323 2.028925 GTTTGGTTGCAAGGGCGG 59.971 61.111 0.00 0.00 45.35 6.13
2237 2324 2.354539 CGTTTGGTTGCAAGGGCG 60.355 61.111 0.00 0.00 45.35 6.13
2238 2325 2.661537 GCGTTTGGTTGCAAGGGC 60.662 61.111 0.00 0.00 41.68 5.19
2239 2326 1.591327 GTGCGTTTGGTTGCAAGGG 60.591 57.895 0.00 0.00 43.75 3.95
2240 2327 1.591327 GGTGCGTTTGGTTGCAAGG 60.591 57.895 0.00 0.00 43.75 3.61
2241 2328 1.591327 GGGTGCGTTTGGTTGCAAG 60.591 57.895 0.00 0.00 43.75 4.01
2242 2329 2.496817 GGGTGCGTTTGGTTGCAA 59.503 55.556 0.00 0.00 43.75 4.08
2243 2330 3.532155 GGGGTGCGTTTGGTTGCA 61.532 61.111 0.00 0.00 39.13 4.08
2244 2331 4.293648 GGGGGTGCGTTTGGTTGC 62.294 66.667 0.00 0.00 0.00 4.17
2245 2332 2.520741 AGGGGGTGCGTTTGGTTG 60.521 61.111 0.00 0.00 0.00 3.77
2246 2333 2.203437 GAGGGGGTGCGTTTGGTT 60.203 61.111 0.00 0.00 0.00 3.67
2247 2334 4.280019 GGAGGGGGTGCGTTTGGT 62.280 66.667 0.00 0.00 0.00 3.67
2248 2335 3.507377 AAGGAGGGGGTGCGTTTGG 62.507 63.158 0.00 0.00 0.00 3.28
2249 2336 1.971695 GAAGGAGGGGGTGCGTTTG 60.972 63.158 0.00 0.00 0.00 2.93
2250 2337 2.154074 AGAAGGAGGGGGTGCGTTT 61.154 57.895 0.00 0.00 0.00 3.60
2251 2338 2.529389 AGAAGGAGGGGGTGCGTT 60.529 61.111 0.00 0.00 0.00 4.84
2252 2339 3.322466 CAGAAGGAGGGGGTGCGT 61.322 66.667 0.00 0.00 0.00 5.24
2253 2340 4.785453 GCAGAAGGAGGGGGTGCG 62.785 72.222 0.00 0.00 0.00 5.34
2254 2341 3.210012 TTGCAGAAGGAGGGGGTGC 62.210 63.158 0.00 0.00 34.62 5.01
2255 2342 1.303643 GTTGCAGAAGGAGGGGGTG 60.304 63.158 0.00 0.00 0.00 4.61
2256 2343 1.142688 ATGTTGCAGAAGGAGGGGGT 61.143 55.000 0.00 0.00 0.00 4.95
2293 2380 6.295180 GGACTTATATTTAGGAACGGAGGGAG 60.295 46.154 0.00 0.00 0.00 4.30
2295 2382 5.543020 AGGACTTATATTTAGGAACGGAGGG 59.457 44.000 0.00 0.00 0.00 4.30
2296 2383 6.667558 AGGACTTATATTTAGGAACGGAGG 57.332 41.667 0.00 0.00 0.00 4.30
2297 2384 8.959705 AAAAGGACTTATATTTAGGAACGGAG 57.040 34.615 0.00 0.00 0.00 4.63
2309 2396 9.453830 AGGTGGAATCTCTAAAAGGACTTATAT 57.546 33.333 0.00 0.00 0.00 0.86
2310 2397 8.855804 AGGTGGAATCTCTAAAAGGACTTATA 57.144 34.615 0.00 0.00 0.00 0.98
2311 2398 7.757242 AGGTGGAATCTCTAAAAGGACTTAT 57.243 36.000 0.00 0.00 0.00 1.73
2312 2399 7.394816 CAAGGTGGAATCTCTAAAAGGACTTA 58.605 38.462 0.00 0.00 0.00 2.24
2313 2400 6.241645 CAAGGTGGAATCTCTAAAAGGACTT 58.758 40.000 0.00 0.00 0.00 3.01
2314 2401 5.280727 CCAAGGTGGAATCTCTAAAAGGACT 60.281 44.000 0.00 0.00 40.96 3.85
2315 2402 4.944317 CCAAGGTGGAATCTCTAAAAGGAC 59.056 45.833 0.00 0.00 40.96 3.85
2316 2403 4.849810 TCCAAGGTGGAATCTCTAAAAGGA 59.150 41.667 0.00 0.00 45.00 3.36
2317 2404 5.179452 TCCAAGGTGGAATCTCTAAAAGG 57.821 43.478 0.00 0.00 45.00 3.11
2329 2416 2.104967 CCGTATGTAGTCCAAGGTGGA 58.895 52.381 0.00 0.00 45.98 4.02
2330 2417 2.100916 CTCCGTATGTAGTCCAAGGTGG 59.899 54.545 0.00 0.00 39.43 4.61
2331 2418 2.481449 GCTCCGTATGTAGTCCAAGGTG 60.481 54.545 0.00 0.00 0.00 4.00
2332 2419 1.755380 GCTCCGTATGTAGTCCAAGGT 59.245 52.381 0.00 0.00 0.00 3.50
2333 2420 1.754803 TGCTCCGTATGTAGTCCAAGG 59.245 52.381 0.00 0.00 0.00 3.61
2334 2421 3.130516 TCTTGCTCCGTATGTAGTCCAAG 59.869 47.826 0.00 0.00 0.00 3.61
2335 2422 3.093814 TCTTGCTCCGTATGTAGTCCAA 58.906 45.455 0.00 0.00 0.00 3.53
2336 2423 2.730382 TCTTGCTCCGTATGTAGTCCA 58.270 47.619 0.00 0.00 0.00 4.02
2337 2424 3.318275 TCATCTTGCTCCGTATGTAGTCC 59.682 47.826 0.00 0.00 0.00 3.85
2338 2425 4.569761 TCATCTTGCTCCGTATGTAGTC 57.430 45.455 0.00 0.00 0.00 2.59
2339 2426 5.537300 ATTCATCTTGCTCCGTATGTAGT 57.463 39.130 0.00 0.00 0.00 2.73
2340 2427 7.946655 TTAATTCATCTTGCTCCGTATGTAG 57.053 36.000 0.00 0.00 0.00 2.74
2341 2428 8.367911 AGATTAATTCATCTTGCTCCGTATGTA 58.632 33.333 0.00 0.00 28.19 2.29
2342 2429 7.220030 AGATTAATTCATCTTGCTCCGTATGT 58.780 34.615 0.00 0.00 28.19 2.29
2343 2430 7.664082 AGATTAATTCATCTTGCTCCGTATG 57.336 36.000 0.00 0.00 28.19 2.39
2344 2431 8.367911 TGTAGATTAATTCATCTTGCTCCGTAT 58.632 33.333 7.43 0.00 35.08 3.06
2345 2432 7.652105 GTGTAGATTAATTCATCTTGCTCCGTA 59.348 37.037 7.43 0.00 35.08 4.02
2346 2433 6.480320 GTGTAGATTAATTCATCTTGCTCCGT 59.520 38.462 7.43 0.00 35.08 4.69
2347 2434 6.703607 AGTGTAGATTAATTCATCTTGCTCCG 59.296 38.462 7.43 0.00 35.08 4.63
2348 2435 8.443953 AAGTGTAGATTAATTCATCTTGCTCC 57.556 34.615 7.43 0.00 35.08 4.70
2425 2512 9.453830 ACTCCCTCTGTTCCTAAATATAAATCT 57.546 33.333 0.00 0.00 0.00 2.40
2428 2515 9.496710 TGTACTCCCTCTGTTCCTAAATATAAA 57.503 33.333 0.00 0.00 0.00 1.40
2429 2516 8.921205 GTGTACTCCCTCTGTTCCTAAATATAA 58.079 37.037 0.00 0.00 0.00 0.98
2430 2517 8.063153 TGTGTACTCCCTCTGTTCCTAAATATA 58.937 37.037 0.00 0.00 0.00 0.86
2431 2518 6.901300 TGTGTACTCCCTCTGTTCCTAAATAT 59.099 38.462 0.00 0.00 0.00 1.28
2432 2519 6.258354 TGTGTACTCCCTCTGTTCCTAAATA 58.742 40.000 0.00 0.00 0.00 1.40
2433 2520 5.091552 TGTGTACTCCCTCTGTTCCTAAAT 58.908 41.667 0.00 0.00 0.00 1.40
2434 2521 4.485875 TGTGTACTCCCTCTGTTCCTAAA 58.514 43.478 0.00 0.00 0.00 1.85
2435 2522 4.122337 TGTGTACTCCCTCTGTTCCTAA 57.878 45.455 0.00 0.00 0.00 2.69
2436 2523 3.820195 TGTGTACTCCCTCTGTTCCTA 57.180 47.619 0.00 0.00 0.00 2.94
2437 2524 2.696526 TGTGTACTCCCTCTGTTCCT 57.303 50.000 0.00 0.00 0.00 3.36
2438 2525 3.260884 TGAATGTGTACTCCCTCTGTTCC 59.739 47.826 0.00 0.00 0.00 3.62
2439 2526 4.537135 TGAATGTGTACTCCCTCTGTTC 57.463 45.455 0.00 0.00 0.00 3.18
2440 2527 4.780021 AGATGAATGTGTACTCCCTCTGTT 59.220 41.667 0.00 0.00 0.00 3.16
2441 2528 4.161189 CAGATGAATGTGTACTCCCTCTGT 59.839 45.833 0.00 0.00 0.00 3.41
2442 2529 4.442612 CCAGATGAATGTGTACTCCCTCTG 60.443 50.000 0.00 0.00 0.00 3.35
2443 2530 3.708631 CCAGATGAATGTGTACTCCCTCT 59.291 47.826 0.00 0.00 0.00 3.69
2444 2531 3.181461 CCCAGATGAATGTGTACTCCCTC 60.181 52.174 0.00 0.00 0.00 4.30
2445 2532 2.774234 CCCAGATGAATGTGTACTCCCT 59.226 50.000 0.00 0.00 0.00 4.20
2446 2533 2.158755 CCCCAGATGAATGTGTACTCCC 60.159 54.545 0.00 0.00 0.00 4.30
2447 2534 2.746472 GCCCCAGATGAATGTGTACTCC 60.746 54.545 0.00 0.00 0.00 3.85
2448 2535 2.171448 AGCCCCAGATGAATGTGTACTC 59.829 50.000 0.00 0.00 0.00 2.59
2449 2536 2.171448 GAGCCCCAGATGAATGTGTACT 59.829 50.000 0.00 0.00 0.00 2.73
2450 2537 2.565841 GAGCCCCAGATGAATGTGTAC 58.434 52.381 0.00 0.00 0.00 2.90
2451 2538 1.490490 GGAGCCCCAGATGAATGTGTA 59.510 52.381 0.00 0.00 0.00 2.90
2452 2539 0.257039 GGAGCCCCAGATGAATGTGT 59.743 55.000 0.00 0.00 0.00 3.72
2453 2540 0.256752 TGGAGCCCCAGATGAATGTG 59.743 55.000 0.00 0.00 37.58 3.21
2454 2541 2.713967 TGGAGCCCCAGATGAATGT 58.286 52.632 0.00 0.00 37.58 2.71
2481 2582 2.202987 GCGAGAGGGGCATGTCAG 60.203 66.667 0.00 0.00 0.00 3.51
2508 2610 2.754472 GGGCAAAATCGCTTTGTCTTT 58.246 42.857 12.27 0.00 46.84 2.52
2620 2735 5.227011 TGGATCAACCTGAACCTTGTGTTC 61.227 45.833 4.80 0.00 43.90 3.18
2638 2753 2.387952 ACCAGTTGGAGGGTGGATC 58.612 57.895 4.92 0.00 35.67 3.36
2639 2754 4.690153 ACCAGTTGGAGGGTGGAT 57.310 55.556 4.92 0.00 35.67 3.41
2719 2835 5.275263 AGATTCAAAATCCAGGGAAGGAA 57.725 39.130 0.00 0.00 41.92 3.36
2720 2836 4.953781 AGATTCAAAATCCAGGGAAGGA 57.046 40.909 0.00 0.00 43.01 3.36
2847 2967 2.446435 GCAGCCTTTCTTATCCACCAA 58.554 47.619 0.00 0.00 0.00 3.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.