Multiple sequence alignment - TraesCS7B01G276400
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7B01G276400 | chr7B | 100.000 | 5402 | 0 | 0 | 987 | 6388 | 505575308 | 505569907 | 0.000000e+00 | 9976.0 |
1 | TraesCS7B01G276400 | chr7B | 100.000 | 468 | 0 | 0 | 1 | 468 | 505576294 | 505575827 | 0.000000e+00 | 865.0 |
2 | TraesCS7B01G276400 | chr7D | 94.660 | 4738 | 149 | 38 | 1098 | 5795 | 479750619 | 479745946 | 0.000000e+00 | 7252.0 |
3 | TraesCS7B01G276400 | chr7D | 94.504 | 746 | 31 | 3 | 5643 | 6388 | 479744405 | 479743670 | 0.000000e+00 | 1142.0 |
4 | TraesCS7B01G276400 | chr7D | 94.130 | 460 | 18 | 2 | 5848 | 6307 | 479745948 | 479745498 | 0.000000e+00 | 691.0 |
5 | TraesCS7B01G276400 | chr7D | 92.384 | 302 | 21 | 1 | 4 | 303 | 479766650 | 479766349 | 4.580000e-116 | 429.0 |
6 | TraesCS7B01G276400 | chr7D | 96.133 | 181 | 5 | 2 | 289 | 468 | 479751385 | 479751206 | 1.740000e-75 | 294.0 |
7 | TraesCS7B01G276400 | chr7D | 98.734 | 79 | 1 | 0 | 987 | 1065 | 479751126 | 479751048 | 2.400000e-29 | 141.0 |
8 | TraesCS7B01G276400 | chr7D | 88.660 | 97 | 6 | 4 | 3865 | 3959 | 479747784 | 479747877 | 5.230000e-21 | 113.0 |
9 | TraesCS7B01G276400 | chr7A | 89.137 | 1970 | 144 | 33 | 1486 | 3417 | 515002662 | 515004599 | 0.000000e+00 | 2388.0 |
10 | TraesCS7B01G276400 | chr7A | 90.813 | 1698 | 111 | 22 | 4233 | 5915 | 515005386 | 515007053 | 0.000000e+00 | 2230.0 |
11 | TraesCS7B01G276400 | chr7A | 89.918 | 367 | 27 | 5 | 3472 | 3828 | 515005017 | 515005383 | 1.250000e-126 | 464.0 |
12 | TraesCS7B01G276400 | chr7A | 84.634 | 410 | 46 | 10 | 987 | 1387 | 515002102 | 515002503 | 6.000000e-105 | 392.0 |
13 | TraesCS7B01G276400 | chr7A | 90.164 | 61 | 3 | 1 | 231 | 291 | 514997705 | 514997762 | 6.870000e-10 | 76.8 |
14 | TraesCS7B01G276400 | chr4A | 83.111 | 225 | 34 | 2 | 5796 | 6018 | 519161813 | 519161591 | 1.090000e-47 | 202.0 |
15 | TraesCS7B01G276400 | chr1A | 89.796 | 98 | 9 | 1 | 3862 | 3959 | 566218077 | 566218173 | 2.420000e-24 | 124.0 |
16 | TraesCS7B01G276400 | chr2D | 91.111 | 90 | 7 | 1 | 3871 | 3960 | 440316106 | 440316018 | 3.130000e-23 | 121.0 |
17 | TraesCS7B01G276400 | chr2D | 87.879 | 99 | 10 | 2 | 3865 | 3963 | 114517659 | 114517563 | 1.460000e-21 | 115.0 |
18 | TraesCS7B01G276400 | chr2B | 91.111 | 90 | 7 | 1 | 3870 | 3959 | 74002921 | 74002833 | 3.130000e-23 | 121.0 |
19 | TraesCS7B01G276400 | chr2B | 91.111 | 90 | 7 | 1 | 3871 | 3960 | 518041532 | 518041444 | 3.130000e-23 | 121.0 |
20 | TraesCS7B01G276400 | chr2B | 87.879 | 99 | 10 | 2 | 3865 | 3963 | 164901471 | 164901375 | 1.460000e-21 | 115.0 |
21 | TraesCS7B01G276400 | chr5D | 91.011 | 89 | 7 | 1 | 3871 | 3959 | 288354387 | 288354300 | 1.130000e-22 | 119.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7B01G276400 | chr7B | 505569907 | 505576294 | 6387 | True | 5420.5 | 9976 | 100.0000 | 1 | 6388 | 2 | chr7B.!!$R1 | 6387 |
1 | TraesCS7B01G276400 | chr7D | 479743670 | 479751385 | 7715 | True | 1904.0 | 7252 | 95.6322 | 289 | 6388 | 5 | chr7D.!!$R2 | 6099 |
2 | TraesCS7B01G276400 | chr7A | 515002102 | 515007053 | 4951 | False | 1368.5 | 2388 | 88.6255 | 987 | 5915 | 4 | chr7A.!!$F2 | 4928 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
28 | 29 | 0.111446 | TGACCTGAAAATTGCCCGGA | 59.889 | 50.000 | 0.73 | 0.0 | 0.00 | 5.14 | F |
30 | 31 | 0.112412 | ACCTGAAAATTGCCCGGAGT | 59.888 | 50.000 | 0.73 | 0.0 | 0.00 | 3.85 | F |
1170 | 1570 | 0.322098 | AATTCGATTGGTGTGCGGGA | 60.322 | 50.000 | 0.00 | 0.0 | 0.00 | 5.14 | F |
1506 | 2007 | 1.026182 | TCATGGTCATTGCGCAGTCC | 61.026 | 55.000 | 11.31 | 12.3 | 0.00 | 3.85 | F |
2886 | 3431 | 0.585838 | CATGTGCACACGCTACAACA | 59.414 | 50.000 | 24.37 | 0.0 | 39.64 | 3.33 | F |
3315 | 3887 | 1.419762 | TGTGCCAGGCTTGTCTTAAGA | 59.580 | 47.619 | 14.15 | 0.0 | 0.00 | 2.10 | F |
4912 | 5861 | 0.608640 | GAGAACCCGCTCTCCTTTCA | 59.391 | 55.000 | 0.00 | 0.0 | 36.60 | 2.69 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1328 | 1734 | 0.820226 | TCAGAGCGCATCTTGCTAGT | 59.180 | 50.000 | 11.47 | 0.00 | 44.18 | 2.57 | R |
1469 | 1970 | 1.132657 | TGACCAACTCACTAAGGGGGA | 60.133 | 52.381 | 0.00 | 0.00 | 0.00 | 4.81 | R |
2868 | 3413 | 0.867746 | CTGTTGTAGCGTGTGCACAT | 59.132 | 50.000 | 24.69 | 9.98 | 46.23 | 3.21 | R |
3172 | 3735 | 2.754472 | GTGTACACACTGCATCTCACA | 58.246 | 47.619 | 21.14 | 0.00 | 43.25 | 3.58 | R |
4051 | 4999 | 0.399454 | CGGAGATCTCATGGGGCAAT | 59.601 | 55.000 | 23.85 | 0.00 | 0.00 | 3.56 | R |
5276 | 6228 | 0.467844 | TGCCCAAGAAAAGCTGCAGA | 60.468 | 50.000 | 20.43 | 0.00 | 0.00 | 4.26 | R |
6018 | 8674 | 0.037590 | TTCAAGGGTGCTATGCCGTT | 59.962 | 50.000 | 0.00 | 0.00 | 34.82 | 4.44 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
23 | 24 | 3.981211 | TCAAGCTTGACCTGAAAATTGC | 58.019 | 40.909 | 25.16 | 0.00 | 31.01 | 3.56 |
24 | 25 | 3.062042 | CAAGCTTGACCTGAAAATTGCC | 58.938 | 45.455 | 22.31 | 0.00 | 0.00 | 4.52 |
25 | 26 | 1.620323 | AGCTTGACCTGAAAATTGCCC | 59.380 | 47.619 | 0.00 | 0.00 | 0.00 | 5.36 |
26 | 27 | 1.669795 | GCTTGACCTGAAAATTGCCCG | 60.670 | 52.381 | 0.00 | 0.00 | 0.00 | 6.13 |
27 | 28 | 0.965439 | TTGACCTGAAAATTGCCCGG | 59.035 | 50.000 | 0.00 | 0.00 | 0.00 | 5.73 |
28 | 29 | 0.111446 | TGACCTGAAAATTGCCCGGA | 59.889 | 50.000 | 0.73 | 0.00 | 0.00 | 5.14 |
29 | 30 | 0.811281 | GACCTGAAAATTGCCCGGAG | 59.189 | 55.000 | 0.73 | 0.00 | 0.00 | 4.63 |
30 | 31 | 0.112412 | ACCTGAAAATTGCCCGGAGT | 59.888 | 50.000 | 0.73 | 0.00 | 0.00 | 3.85 |
31 | 32 | 1.256812 | CCTGAAAATTGCCCGGAGTT | 58.743 | 50.000 | 0.73 | 0.00 | 0.00 | 3.01 |
32 | 33 | 1.202348 | CCTGAAAATTGCCCGGAGTTC | 59.798 | 52.381 | 0.73 | 0.00 | 0.00 | 3.01 |
33 | 34 | 2.162681 | CTGAAAATTGCCCGGAGTTCT | 58.837 | 47.619 | 0.73 | 0.00 | 0.00 | 3.01 |
34 | 35 | 3.343617 | CTGAAAATTGCCCGGAGTTCTA | 58.656 | 45.455 | 0.73 | 0.00 | 0.00 | 2.10 |
35 | 36 | 3.947834 | CTGAAAATTGCCCGGAGTTCTAT | 59.052 | 43.478 | 0.73 | 0.00 | 0.00 | 1.98 |
36 | 37 | 4.340617 | TGAAAATTGCCCGGAGTTCTATT | 58.659 | 39.130 | 0.73 | 0.00 | 0.00 | 1.73 |
37 | 38 | 5.502079 | TGAAAATTGCCCGGAGTTCTATTA | 58.498 | 37.500 | 0.73 | 0.00 | 0.00 | 0.98 |
38 | 39 | 6.126409 | TGAAAATTGCCCGGAGTTCTATTAT | 58.874 | 36.000 | 0.73 | 0.00 | 0.00 | 1.28 |
39 | 40 | 6.605594 | TGAAAATTGCCCGGAGTTCTATTATT | 59.394 | 34.615 | 0.73 | 0.00 | 0.00 | 1.40 |
40 | 41 | 7.123547 | TGAAAATTGCCCGGAGTTCTATTATTT | 59.876 | 33.333 | 0.73 | 0.00 | 0.00 | 1.40 |
41 | 42 | 7.418337 | AAATTGCCCGGAGTTCTATTATTTT | 57.582 | 32.000 | 0.73 | 0.00 | 0.00 | 1.82 |
42 | 43 | 7.418337 | AATTGCCCGGAGTTCTATTATTTTT | 57.582 | 32.000 | 0.73 | 0.00 | 0.00 | 1.94 |
43 | 44 | 8.528044 | AATTGCCCGGAGTTCTATTATTTTTA | 57.472 | 30.769 | 0.73 | 0.00 | 0.00 | 1.52 |
44 | 45 | 8.706322 | ATTGCCCGGAGTTCTATTATTTTTAT | 57.294 | 30.769 | 0.73 | 0.00 | 0.00 | 1.40 |
45 | 46 | 8.528044 | TTGCCCGGAGTTCTATTATTTTTATT | 57.472 | 30.769 | 0.73 | 0.00 | 0.00 | 1.40 |
46 | 47 | 9.629878 | TTGCCCGGAGTTCTATTATTTTTATTA | 57.370 | 29.630 | 0.73 | 0.00 | 0.00 | 0.98 |
47 | 48 | 9.059260 | TGCCCGGAGTTCTATTATTTTTATTAC | 57.941 | 33.333 | 0.73 | 0.00 | 0.00 | 1.89 |
48 | 49 | 9.281371 | GCCCGGAGTTCTATTATTTTTATTACT | 57.719 | 33.333 | 0.73 | 0.00 | 0.00 | 2.24 |
64 | 65 | 9.886132 | TTTTTATTACTAAGTGATGAGTCTCCC | 57.114 | 33.333 | 0.00 | 0.00 | 0.00 | 4.30 |
65 | 66 | 8.840200 | TTTATTACTAAGTGATGAGTCTCCCT | 57.160 | 34.615 | 0.00 | 0.00 | 0.00 | 4.20 |
66 | 67 | 6.969993 | ATTACTAAGTGATGAGTCTCCCTC | 57.030 | 41.667 | 0.00 | 0.00 | 40.89 | 4.30 |
77 | 78 | 5.470047 | TGAGTCTCCCTCAGTAACTTTTC | 57.530 | 43.478 | 0.00 | 0.00 | 45.34 | 2.29 |
78 | 79 | 4.899457 | TGAGTCTCCCTCAGTAACTTTTCA | 59.101 | 41.667 | 0.00 | 0.00 | 45.34 | 2.69 |
79 | 80 | 5.365605 | TGAGTCTCCCTCAGTAACTTTTCAA | 59.634 | 40.000 | 0.00 | 0.00 | 45.34 | 2.69 |
80 | 81 | 6.043243 | TGAGTCTCCCTCAGTAACTTTTCAAT | 59.957 | 38.462 | 0.00 | 0.00 | 45.34 | 2.57 |
81 | 82 | 6.842676 | AGTCTCCCTCAGTAACTTTTCAATT | 58.157 | 36.000 | 0.00 | 0.00 | 0.00 | 2.32 |
82 | 83 | 7.974504 | AGTCTCCCTCAGTAACTTTTCAATTA | 58.025 | 34.615 | 0.00 | 0.00 | 0.00 | 1.40 |
83 | 84 | 7.878644 | AGTCTCCCTCAGTAACTTTTCAATTAC | 59.121 | 37.037 | 0.00 | 0.00 | 0.00 | 1.89 |
84 | 85 | 7.660208 | GTCTCCCTCAGTAACTTTTCAATTACA | 59.340 | 37.037 | 0.00 | 0.00 | 34.36 | 2.41 |
85 | 86 | 8.215050 | TCTCCCTCAGTAACTTTTCAATTACAA | 58.785 | 33.333 | 0.00 | 0.00 | 34.36 | 2.41 |
86 | 87 | 8.391075 | TCCCTCAGTAACTTTTCAATTACAAG | 57.609 | 34.615 | 0.00 | 0.00 | 34.36 | 3.16 |
87 | 88 | 7.996644 | TCCCTCAGTAACTTTTCAATTACAAGT | 59.003 | 33.333 | 0.00 | 0.00 | 34.36 | 3.16 |
88 | 89 | 9.280174 | CCCTCAGTAACTTTTCAATTACAAGTA | 57.720 | 33.333 | 0.00 | 0.00 | 34.36 | 2.24 |
125 | 126 | 8.779354 | ACACATAGAAACTTTCATTCTCTACC | 57.221 | 34.615 | 4.34 | 0.00 | 38.13 | 3.18 |
126 | 127 | 8.375506 | ACACATAGAAACTTTCATTCTCTACCA | 58.624 | 33.333 | 4.34 | 0.00 | 38.13 | 3.25 |
127 | 128 | 9.388506 | CACATAGAAACTTTCATTCTCTACCAT | 57.611 | 33.333 | 4.34 | 0.00 | 38.13 | 3.55 |
128 | 129 | 9.388506 | ACATAGAAACTTTCATTCTCTACCATG | 57.611 | 33.333 | 4.34 | 0.00 | 38.13 | 3.66 |
129 | 130 | 9.388506 | CATAGAAACTTTCATTCTCTACCATGT | 57.611 | 33.333 | 4.34 | 0.00 | 38.13 | 3.21 |
130 | 131 | 7.913674 | AGAAACTTTCATTCTCTACCATGTC | 57.086 | 36.000 | 4.34 | 0.00 | 31.61 | 3.06 |
131 | 132 | 6.881602 | AGAAACTTTCATTCTCTACCATGTCC | 59.118 | 38.462 | 4.34 | 0.00 | 31.61 | 4.02 |
132 | 133 | 4.759782 | ACTTTCATTCTCTACCATGTCCG | 58.240 | 43.478 | 0.00 | 0.00 | 0.00 | 4.79 |
133 | 134 | 3.819564 | TTCATTCTCTACCATGTCCGG | 57.180 | 47.619 | 0.00 | 0.00 | 0.00 | 5.14 |
134 | 135 | 3.026707 | TCATTCTCTACCATGTCCGGA | 57.973 | 47.619 | 0.00 | 0.00 | 0.00 | 5.14 |
135 | 136 | 3.371034 | TCATTCTCTACCATGTCCGGAA | 58.629 | 45.455 | 5.23 | 0.00 | 0.00 | 4.30 |
136 | 137 | 3.384789 | TCATTCTCTACCATGTCCGGAAG | 59.615 | 47.826 | 5.23 | 0.00 | 0.00 | 3.46 |
137 | 138 | 2.820728 | TCTCTACCATGTCCGGAAGA | 57.179 | 50.000 | 5.23 | 2.89 | 0.00 | 2.87 |
138 | 139 | 3.314307 | TCTCTACCATGTCCGGAAGAT | 57.686 | 47.619 | 5.23 | 0.00 | 0.00 | 2.40 |
139 | 140 | 4.448720 | TCTCTACCATGTCCGGAAGATA | 57.551 | 45.455 | 5.23 | 0.00 | 0.00 | 1.98 |
140 | 141 | 4.999310 | TCTCTACCATGTCCGGAAGATAT | 58.001 | 43.478 | 5.23 | 0.00 | 0.00 | 1.63 |
141 | 142 | 6.135819 | TCTCTACCATGTCCGGAAGATATA | 57.864 | 41.667 | 5.23 | 0.00 | 0.00 | 0.86 |
142 | 143 | 6.732487 | TCTCTACCATGTCCGGAAGATATAT | 58.268 | 40.000 | 5.23 | 0.00 | 0.00 | 0.86 |
143 | 144 | 6.603599 | TCTCTACCATGTCCGGAAGATATATG | 59.396 | 42.308 | 5.23 | 4.50 | 0.00 | 1.78 |
144 | 145 | 6.253758 | TCTACCATGTCCGGAAGATATATGT | 58.746 | 40.000 | 5.23 | 0.00 | 0.00 | 2.29 |
145 | 146 | 5.152623 | ACCATGTCCGGAAGATATATGTG | 57.847 | 43.478 | 5.23 | 2.25 | 0.00 | 3.21 |
146 | 147 | 4.838423 | ACCATGTCCGGAAGATATATGTGA | 59.162 | 41.667 | 5.23 | 0.00 | 0.00 | 3.58 |
147 | 148 | 5.485353 | ACCATGTCCGGAAGATATATGTGAT | 59.515 | 40.000 | 5.23 | 0.00 | 0.00 | 3.06 |
148 | 149 | 5.814188 | CCATGTCCGGAAGATATATGTGATG | 59.186 | 44.000 | 5.23 | 0.00 | 0.00 | 3.07 |
149 | 150 | 6.401394 | CATGTCCGGAAGATATATGTGATGT | 58.599 | 40.000 | 5.23 | 0.00 | 0.00 | 3.06 |
150 | 151 | 6.419484 | TGTCCGGAAGATATATGTGATGTT | 57.581 | 37.500 | 5.23 | 0.00 | 0.00 | 2.71 |
151 | 152 | 6.826668 | TGTCCGGAAGATATATGTGATGTTT | 58.173 | 36.000 | 5.23 | 0.00 | 0.00 | 2.83 |
152 | 153 | 7.279615 | TGTCCGGAAGATATATGTGATGTTTT | 58.720 | 34.615 | 5.23 | 0.00 | 0.00 | 2.43 |
153 | 154 | 7.226523 | TGTCCGGAAGATATATGTGATGTTTTG | 59.773 | 37.037 | 5.23 | 0.00 | 0.00 | 2.44 |
154 | 155 | 7.441157 | GTCCGGAAGATATATGTGATGTTTTGA | 59.559 | 37.037 | 5.23 | 0.00 | 0.00 | 2.69 |
155 | 156 | 7.657354 | TCCGGAAGATATATGTGATGTTTTGAG | 59.343 | 37.037 | 0.00 | 0.00 | 0.00 | 3.02 |
156 | 157 | 7.095060 | CCGGAAGATATATGTGATGTTTTGAGG | 60.095 | 40.741 | 0.00 | 0.00 | 0.00 | 3.86 |
157 | 158 | 7.657354 | CGGAAGATATATGTGATGTTTTGAGGA | 59.343 | 37.037 | 0.00 | 0.00 | 0.00 | 3.71 |
158 | 159 | 8.997323 | GGAAGATATATGTGATGTTTTGAGGAG | 58.003 | 37.037 | 0.00 | 0.00 | 0.00 | 3.69 |
159 | 160 | 7.976135 | AGATATATGTGATGTTTTGAGGAGC | 57.024 | 36.000 | 0.00 | 0.00 | 0.00 | 4.70 |
160 | 161 | 7.512130 | AGATATATGTGATGTTTTGAGGAGCA | 58.488 | 34.615 | 0.00 | 0.00 | 0.00 | 4.26 |
161 | 162 | 5.824904 | ATATGTGATGTTTTGAGGAGCAC | 57.175 | 39.130 | 0.00 | 0.00 | 0.00 | 4.40 |
162 | 163 | 1.872952 | TGTGATGTTTTGAGGAGCACG | 59.127 | 47.619 | 0.00 | 0.00 | 0.00 | 5.34 |
163 | 164 | 2.143122 | GTGATGTTTTGAGGAGCACGA | 58.857 | 47.619 | 0.00 | 0.00 | 0.00 | 4.35 |
164 | 165 | 2.548057 | GTGATGTTTTGAGGAGCACGAA | 59.452 | 45.455 | 0.00 | 0.00 | 0.00 | 3.85 |
165 | 166 | 3.003275 | GTGATGTTTTGAGGAGCACGAAA | 59.997 | 43.478 | 0.00 | 0.00 | 0.00 | 3.46 |
166 | 167 | 3.629855 | TGATGTTTTGAGGAGCACGAAAA | 59.370 | 39.130 | 0.00 | 0.00 | 0.00 | 2.29 |
167 | 168 | 4.097135 | TGATGTTTTGAGGAGCACGAAAAA | 59.903 | 37.500 | 0.00 | 0.00 | 0.00 | 1.94 |
168 | 169 | 4.647424 | TGTTTTGAGGAGCACGAAAAAT | 57.353 | 36.364 | 0.00 | 0.00 | 0.00 | 1.82 |
169 | 170 | 4.358851 | TGTTTTGAGGAGCACGAAAAATG | 58.641 | 39.130 | 0.00 | 0.00 | 0.00 | 2.32 |
170 | 171 | 3.641437 | TTTGAGGAGCACGAAAAATGG | 57.359 | 42.857 | 0.00 | 0.00 | 0.00 | 3.16 |
171 | 172 | 2.559698 | TGAGGAGCACGAAAAATGGA | 57.440 | 45.000 | 0.00 | 0.00 | 0.00 | 3.41 |
172 | 173 | 2.857483 | TGAGGAGCACGAAAAATGGAA | 58.143 | 42.857 | 0.00 | 0.00 | 0.00 | 3.53 |
173 | 174 | 2.552315 | TGAGGAGCACGAAAAATGGAAC | 59.448 | 45.455 | 0.00 | 0.00 | 0.00 | 3.62 |
174 | 175 | 1.535462 | AGGAGCACGAAAAATGGAACG | 59.465 | 47.619 | 0.00 | 0.00 | 0.00 | 3.95 |
175 | 176 | 1.533731 | GGAGCACGAAAAATGGAACGA | 59.466 | 47.619 | 0.00 | 0.00 | 0.00 | 3.85 |
176 | 177 | 2.161609 | GGAGCACGAAAAATGGAACGAT | 59.838 | 45.455 | 0.00 | 0.00 | 0.00 | 3.73 |
177 | 178 | 3.417185 | GAGCACGAAAAATGGAACGATC | 58.583 | 45.455 | 0.00 | 0.00 | 0.00 | 3.69 |
178 | 179 | 3.074412 | AGCACGAAAAATGGAACGATCT | 58.926 | 40.909 | 0.00 | 0.00 | 0.00 | 2.75 |
179 | 180 | 3.502211 | AGCACGAAAAATGGAACGATCTT | 59.498 | 39.130 | 0.00 | 0.00 | 0.00 | 2.40 |
180 | 181 | 4.023193 | AGCACGAAAAATGGAACGATCTTT | 60.023 | 37.500 | 0.00 | 0.00 | 0.00 | 2.52 |
181 | 182 | 4.320953 | GCACGAAAAATGGAACGATCTTTC | 59.679 | 41.667 | 3.38 | 3.38 | 0.00 | 2.62 |
182 | 183 | 4.851558 | CACGAAAAATGGAACGATCTTTCC | 59.148 | 41.667 | 21.19 | 21.19 | 44.86 | 3.13 |
183 | 184 | 4.760204 | ACGAAAAATGGAACGATCTTTCCT | 59.240 | 37.500 | 26.22 | 12.85 | 44.89 | 3.36 |
184 | 185 | 5.240844 | ACGAAAAATGGAACGATCTTTCCTT | 59.759 | 36.000 | 26.22 | 19.39 | 44.89 | 3.36 |
185 | 186 | 5.795441 | CGAAAAATGGAACGATCTTTCCTTC | 59.205 | 40.000 | 26.22 | 20.28 | 44.89 | 3.46 |
186 | 187 | 6.348540 | CGAAAAATGGAACGATCTTTCCTTCT | 60.349 | 38.462 | 26.22 | 9.22 | 44.89 | 2.85 |
187 | 188 | 7.148474 | CGAAAAATGGAACGATCTTTCCTTCTA | 60.148 | 37.037 | 26.22 | 10.92 | 44.89 | 2.10 |
188 | 189 | 8.581253 | AAAAATGGAACGATCTTTCCTTCTAT | 57.419 | 30.769 | 26.22 | 12.49 | 44.89 | 1.98 |
189 | 190 | 8.581253 | AAAATGGAACGATCTTTCCTTCTATT | 57.419 | 30.769 | 26.22 | 16.71 | 44.89 | 1.73 |
190 | 191 | 7.559590 | AATGGAACGATCTTTCCTTCTATTG | 57.440 | 36.000 | 26.22 | 0.00 | 44.89 | 1.90 |
191 | 192 | 6.294361 | TGGAACGATCTTTCCTTCTATTGA | 57.706 | 37.500 | 26.22 | 6.02 | 44.89 | 2.57 |
192 | 193 | 6.106673 | TGGAACGATCTTTCCTTCTATTGAC | 58.893 | 40.000 | 26.22 | 2.50 | 44.89 | 3.18 |
193 | 194 | 5.524281 | GGAACGATCTTTCCTTCTATTGACC | 59.476 | 44.000 | 20.82 | 0.00 | 41.80 | 4.02 |
194 | 195 | 5.677319 | ACGATCTTTCCTTCTATTGACCA | 57.323 | 39.130 | 0.00 | 0.00 | 0.00 | 4.02 |
195 | 196 | 5.420409 | ACGATCTTTCCTTCTATTGACCAC | 58.580 | 41.667 | 0.00 | 0.00 | 0.00 | 4.16 |
196 | 197 | 4.811557 | CGATCTTTCCTTCTATTGACCACC | 59.188 | 45.833 | 0.00 | 0.00 | 0.00 | 4.61 |
197 | 198 | 5.626809 | CGATCTTTCCTTCTATTGACCACCA | 60.627 | 44.000 | 0.00 | 0.00 | 0.00 | 4.17 |
198 | 199 | 5.779241 | TCTTTCCTTCTATTGACCACCAT | 57.221 | 39.130 | 0.00 | 0.00 | 0.00 | 3.55 |
199 | 200 | 6.139679 | TCTTTCCTTCTATTGACCACCATT | 57.860 | 37.500 | 0.00 | 0.00 | 0.00 | 3.16 |
200 | 201 | 6.180472 | TCTTTCCTTCTATTGACCACCATTC | 58.820 | 40.000 | 0.00 | 0.00 | 0.00 | 2.67 |
201 | 202 | 4.503714 | TCCTTCTATTGACCACCATTCC | 57.496 | 45.455 | 0.00 | 0.00 | 0.00 | 3.01 |
202 | 203 | 3.849574 | TCCTTCTATTGACCACCATTCCA | 59.150 | 43.478 | 0.00 | 0.00 | 0.00 | 3.53 |
203 | 204 | 3.947834 | CCTTCTATTGACCACCATTCCAC | 59.052 | 47.826 | 0.00 | 0.00 | 0.00 | 4.02 |
204 | 205 | 4.567537 | CCTTCTATTGACCACCATTCCACA | 60.568 | 45.833 | 0.00 | 0.00 | 0.00 | 4.17 |
205 | 206 | 4.860802 | TCTATTGACCACCATTCCACAT | 57.139 | 40.909 | 0.00 | 0.00 | 0.00 | 3.21 |
206 | 207 | 4.780815 | TCTATTGACCACCATTCCACATC | 58.219 | 43.478 | 0.00 | 0.00 | 0.00 | 3.06 |
207 | 208 | 3.744940 | ATTGACCACCATTCCACATCT | 57.255 | 42.857 | 0.00 | 0.00 | 0.00 | 2.90 |
208 | 209 | 3.524095 | TTGACCACCATTCCACATCTT | 57.476 | 42.857 | 0.00 | 0.00 | 0.00 | 2.40 |
209 | 210 | 3.524095 | TGACCACCATTCCACATCTTT | 57.476 | 42.857 | 0.00 | 0.00 | 0.00 | 2.52 |
210 | 211 | 3.156293 | TGACCACCATTCCACATCTTTG | 58.844 | 45.455 | 0.00 | 0.00 | 0.00 | 2.77 |
211 | 212 | 3.157087 | GACCACCATTCCACATCTTTGT | 58.843 | 45.455 | 0.00 | 0.00 | 36.15 | 2.83 |
212 | 213 | 3.573967 | GACCACCATTCCACATCTTTGTT | 59.426 | 43.478 | 0.00 | 0.00 | 32.34 | 2.83 |
213 | 214 | 3.573967 | ACCACCATTCCACATCTTTGTTC | 59.426 | 43.478 | 0.00 | 0.00 | 32.34 | 3.18 |
214 | 215 | 3.828451 | CCACCATTCCACATCTTTGTTCT | 59.172 | 43.478 | 0.00 | 0.00 | 32.34 | 3.01 |
215 | 216 | 4.281688 | CCACCATTCCACATCTTTGTTCTT | 59.718 | 41.667 | 0.00 | 0.00 | 32.34 | 2.52 |
216 | 217 | 5.221501 | CCACCATTCCACATCTTTGTTCTTT | 60.222 | 40.000 | 0.00 | 0.00 | 32.34 | 2.52 |
217 | 218 | 6.015519 | CCACCATTCCACATCTTTGTTCTTTA | 60.016 | 38.462 | 0.00 | 0.00 | 32.34 | 1.85 |
218 | 219 | 7.309990 | CCACCATTCCACATCTTTGTTCTTTAT | 60.310 | 37.037 | 0.00 | 0.00 | 32.34 | 1.40 |
219 | 220 | 8.090214 | CACCATTCCACATCTTTGTTCTTTATT | 58.910 | 33.333 | 0.00 | 0.00 | 32.34 | 1.40 |
220 | 221 | 8.650490 | ACCATTCCACATCTTTGTTCTTTATTT | 58.350 | 29.630 | 0.00 | 0.00 | 32.34 | 1.40 |
221 | 222 | 9.492973 | CCATTCCACATCTTTGTTCTTTATTTT | 57.507 | 29.630 | 0.00 | 0.00 | 32.34 | 1.82 |
292 | 293 | 7.065120 | TGACATCAAACCCATTTCTCAAAAT | 57.935 | 32.000 | 0.00 | 0.00 | 35.43 | 1.82 |
311 | 312 | 7.284074 | TCAAAATTCTTGTAGTGTTAGGTGGA | 58.716 | 34.615 | 0.00 | 0.00 | 0.00 | 4.02 |
337 | 338 | 3.200165 | GTCCTTAAGCCCACCTGTTCTAT | 59.800 | 47.826 | 0.00 | 0.00 | 0.00 | 1.98 |
338 | 339 | 3.199946 | TCCTTAAGCCCACCTGTTCTATG | 59.800 | 47.826 | 0.00 | 0.00 | 0.00 | 2.23 |
1056 | 1058 | 4.254709 | ACCAGCTCGCAGGCAACA | 62.255 | 61.111 | 0.00 | 0.00 | 41.41 | 3.33 |
1072 | 1074 | 0.916809 | AACACCCCCTAAATCCTCCG | 59.083 | 55.000 | 0.00 | 0.00 | 0.00 | 4.63 |
1074 | 1076 | 2.076803 | ACCCCCTAAATCCTCCGCC | 61.077 | 63.158 | 0.00 | 0.00 | 0.00 | 6.13 |
1077 | 1079 | 2.830514 | CCCTAAATCCTCCGCCCCC | 61.831 | 68.421 | 0.00 | 0.00 | 0.00 | 5.40 |
1170 | 1570 | 0.322098 | AATTCGATTGGTGTGCGGGA | 60.322 | 50.000 | 0.00 | 0.00 | 0.00 | 5.14 |
1213 | 1613 | 4.577246 | GCGCGGCAGAGGACTAGG | 62.577 | 72.222 | 8.83 | 0.00 | 0.00 | 3.02 |
1259 | 1665 | 2.017783 | CTGCGCGCAAATGCACTTT | 61.018 | 52.632 | 35.50 | 0.00 | 42.21 | 2.66 |
1296 | 1702 | 2.396590 | ACAACCGCGGTTCAGAATAT | 57.603 | 45.000 | 39.38 | 15.40 | 36.00 | 1.28 |
1298 | 1704 | 3.078837 | ACAACCGCGGTTCAGAATATTT | 58.921 | 40.909 | 39.38 | 13.71 | 36.00 | 1.40 |
1362 | 1768 | 4.435386 | GCGCTCTGATTCTCAGTTTTTCTC | 60.435 | 45.833 | 0.00 | 0.00 | 44.58 | 2.87 |
1370 | 1776 | 6.931281 | TGATTCTCAGTTTTTCTCTACCAGTG | 59.069 | 38.462 | 0.00 | 0.00 | 0.00 | 3.66 |
1403 | 1904 | 3.729966 | TGAACCAGTACATTGTAACGCA | 58.270 | 40.909 | 0.00 | 0.00 | 0.00 | 5.24 |
1466 | 1967 | 5.163258 | TGGCTTTGGGTTGTTGTGAAAATAT | 60.163 | 36.000 | 0.00 | 0.00 | 0.00 | 1.28 |
1467 | 1968 | 5.762711 | GGCTTTGGGTTGTTGTGAAAATATT | 59.237 | 36.000 | 0.00 | 0.00 | 0.00 | 1.28 |
1469 | 1970 | 6.259829 | GCTTTGGGTTGTTGTGAAAATATTGT | 59.740 | 34.615 | 0.00 | 0.00 | 0.00 | 2.71 |
1475 | 1976 | 4.746466 | TGTTGTGAAAATATTGTCCCCCT | 58.254 | 39.130 | 3.10 | 0.00 | 0.00 | 4.79 |
1506 | 2007 | 1.026182 | TCATGGTCATTGCGCAGTCC | 61.026 | 55.000 | 11.31 | 12.30 | 0.00 | 3.85 |
1518 | 2020 | 1.635663 | CGCAGTCCGGAACCAATGAC | 61.636 | 60.000 | 5.23 | 0.00 | 0.00 | 3.06 |
1650 | 2154 | 3.648739 | TGTGCAGGGTATATGGACTACA | 58.351 | 45.455 | 0.00 | 0.00 | 39.49 | 2.74 |
1653 | 2157 | 4.101119 | GTGCAGGGTATATGGACTACACTT | 59.899 | 45.833 | 0.00 | 0.00 | 36.23 | 3.16 |
1680 | 2184 | 6.049149 | TCAGAGCAATGGCAAGTATAAGTAC | 58.951 | 40.000 | 0.00 | 0.00 | 44.61 | 2.73 |
1713 | 2217 | 6.117975 | ACCATTCCATTTCTTGCAGAATTT | 57.882 | 33.333 | 0.00 | 0.00 | 33.67 | 1.82 |
1735 | 2239 | 9.855021 | AATTTTTCAAGGTACATATACTGCAAC | 57.145 | 29.630 | 0.00 | 0.00 | 0.00 | 4.17 |
1765 | 2269 | 7.184161 | TGGAATCTTATGCTATTGCCCATAAT | 58.816 | 34.615 | 0.00 | 0.00 | 38.71 | 1.28 |
1766 | 2270 | 7.675195 | TGGAATCTTATGCTATTGCCCATAATT | 59.325 | 33.333 | 0.00 | 0.00 | 38.71 | 1.40 |
1767 | 2271 | 8.534496 | GGAATCTTATGCTATTGCCCATAATTT | 58.466 | 33.333 | 0.00 | 0.00 | 38.71 | 1.82 |
1771 | 2275 | 8.579006 | TCTTATGCTATTGCCCATAATTTTCTG | 58.421 | 33.333 | 0.00 | 0.00 | 38.71 | 3.02 |
1796 | 2301 | 7.064229 | GGGACCAATATATCTGTTTTAACCCA | 58.936 | 38.462 | 0.00 | 0.00 | 0.00 | 4.51 |
1848 | 2354 | 9.364989 | CAATAATTTTGGACATTTACATCCGTT | 57.635 | 29.630 | 0.00 | 0.00 | 37.87 | 4.44 |
1875 | 2381 | 4.518970 | CCTAAGTGGTGCAAACATGTAGTT | 59.481 | 41.667 | 0.00 | 0.00 | 43.89 | 2.24 |
1929 | 2438 | 8.806146 | TCTATAACTCTTTACCGTAAGTGGTTT | 58.194 | 33.333 | 8.84 | 0.00 | 43.56 | 3.27 |
2333 | 2843 | 4.471025 | TCTTGTATGTGGTCCATGTCAGAT | 59.529 | 41.667 | 0.00 | 0.00 | 34.86 | 2.90 |
2344 | 2854 | 2.686915 | CCATGTCAGATTTTGCTCCCTC | 59.313 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
2371 | 2881 | 6.882610 | ACAAAACTCAGATTTGATGCACTA | 57.117 | 33.333 | 13.95 | 0.00 | 39.56 | 2.74 |
2408 | 2918 | 8.961294 | AACTGATTGAAAACAATTGAATGGAA | 57.039 | 26.923 | 13.59 | 0.00 | 0.00 | 3.53 |
2514 | 3026 | 5.537188 | TGTGGTTTTATTTCACCTCAATGC | 58.463 | 37.500 | 0.00 | 0.00 | 34.40 | 3.56 |
2591 | 3134 | 1.908619 | TCCAATCTTCCTGCACAGCTA | 59.091 | 47.619 | 0.00 | 0.00 | 0.00 | 3.32 |
2592 | 3135 | 2.507058 | TCCAATCTTCCTGCACAGCTAT | 59.493 | 45.455 | 0.00 | 0.00 | 0.00 | 2.97 |
2593 | 3136 | 3.054139 | TCCAATCTTCCTGCACAGCTATT | 60.054 | 43.478 | 0.00 | 0.00 | 0.00 | 1.73 |
2594 | 3137 | 3.698040 | CCAATCTTCCTGCACAGCTATTT | 59.302 | 43.478 | 0.00 | 0.00 | 0.00 | 1.40 |
2595 | 3138 | 4.201990 | CCAATCTTCCTGCACAGCTATTTC | 60.202 | 45.833 | 0.00 | 0.00 | 0.00 | 2.17 |
2596 | 3139 | 3.701205 | TCTTCCTGCACAGCTATTTCA | 57.299 | 42.857 | 0.00 | 0.00 | 0.00 | 2.69 |
2597 | 3140 | 4.226427 | TCTTCCTGCACAGCTATTTCAT | 57.774 | 40.909 | 0.00 | 0.00 | 0.00 | 2.57 |
2598 | 3141 | 4.592942 | TCTTCCTGCACAGCTATTTCATT | 58.407 | 39.130 | 0.00 | 0.00 | 0.00 | 2.57 |
2599 | 3142 | 5.012239 | TCTTCCTGCACAGCTATTTCATTT | 58.988 | 37.500 | 0.00 | 0.00 | 0.00 | 2.32 |
2600 | 3143 | 5.477984 | TCTTCCTGCACAGCTATTTCATTTT | 59.522 | 36.000 | 0.00 | 0.00 | 0.00 | 1.82 |
2601 | 3144 | 5.314923 | TCCTGCACAGCTATTTCATTTTC | 57.685 | 39.130 | 0.00 | 0.00 | 0.00 | 2.29 |
2602 | 3145 | 5.012239 | TCCTGCACAGCTATTTCATTTTCT | 58.988 | 37.500 | 0.00 | 0.00 | 0.00 | 2.52 |
2603 | 3146 | 5.477984 | TCCTGCACAGCTATTTCATTTTCTT | 59.522 | 36.000 | 0.00 | 0.00 | 0.00 | 2.52 |
2604 | 3147 | 6.015180 | TCCTGCACAGCTATTTCATTTTCTTT | 60.015 | 34.615 | 0.00 | 0.00 | 0.00 | 2.52 |
2605 | 3148 | 6.647895 | CCTGCACAGCTATTTCATTTTCTTTT | 59.352 | 34.615 | 0.00 | 0.00 | 0.00 | 2.27 |
2606 | 3149 | 7.172019 | CCTGCACAGCTATTTCATTTTCTTTTT | 59.828 | 33.333 | 0.00 | 0.00 | 0.00 | 1.94 |
2607 | 3150 | 7.853524 | TGCACAGCTATTTCATTTTCTTTTTG | 58.146 | 30.769 | 0.00 | 0.00 | 0.00 | 2.44 |
2608 | 3151 | 6.793680 | GCACAGCTATTTCATTTTCTTTTTGC | 59.206 | 34.615 | 0.00 | 0.00 | 0.00 | 3.68 |
2609 | 3152 | 7.518689 | GCACAGCTATTTCATTTTCTTTTTGCA | 60.519 | 33.333 | 0.00 | 0.00 | 0.00 | 4.08 |
2610 | 3153 | 8.336806 | CACAGCTATTTCATTTTCTTTTTGCAA | 58.663 | 29.630 | 0.00 | 0.00 | 0.00 | 4.08 |
2611 | 3154 | 9.059260 | ACAGCTATTTCATTTTCTTTTTGCAAT | 57.941 | 25.926 | 0.00 | 0.00 | 0.00 | 3.56 |
2679 | 3222 | 2.256174 | CTTTTGATGGCTTGCATCACG | 58.744 | 47.619 | 3.89 | 0.00 | 38.61 | 4.35 |
2732 | 3277 | 4.869861 | GCATTGTTGTGGTTTCAGAGTTTT | 59.130 | 37.500 | 0.00 | 0.00 | 0.00 | 2.43 |
2846 | 3391 | 8.778358 | GCTATATTATGAGAAAGTTTCTGGTGG | 58.222 | 37.037 | 22.68 | 4.26 | 40.87 | 4.61 |
2868 | 3413 | 1.078497 | CCACCCTTAGATGCACGCA | 60.078 | 57.895 | 0.00 | 0.00 | 0.00 | 5.24 |
2884 | 3429 | 1.573932 | GCATGTGCACACGCTACAA | 59.426 | 52.632 | 29.18 | 0.57 | 41.59 | 2.41 |
2885 | 3430 | 0.725784 | GCATGTGCACACGCTACAAC | 60.726 | 55.000 | 29.18 | 0.07 | 41.59 | 3.32 |
2886 | 3431 | 0.585838 | CATGTGCACACGCTACAACA | 59.414 | 50.000 | 24.37 | 0.00 | 39.64 | 3.33 |
2927 | 3472 | 2.406024 | GCATTCTGCATGTTTGAACACG | 59.594 | 45.455 | 0.00 | 0.00 | 44.26 | 4.49 |
2947 | 3492 | 3.813166 | ACGAAACACATGTACCAGGAAAG | 59.187 | 43.478 | 0.00 | 0.00 | 0.00 | 2.62 |
2958 | 3503 | 4.825085 | TGTACCAGGAAAGTGGAATTTCAC | 59.175 | 41.667 | 9.00 | 9.00 | 40.44 | 3.18 |
2983 | 3530 | 9.530633 | ACTGTATAGTAGCTTTATCTTTTTCCG | 57.469 | 33.333 | 0.00 | 0.00 | 34.74 | 4.30 |
3026 | 3573 | 9.542462 | TTCTTTTCCAGTAAGATATGTATTCGG | 57.458 | 33.333 | 0.00 | 0.00 | 32.09 | 4.30 |
3172 | 3735 | 5.131977 | TGGATACATGGTAGTGCACCTAAAT | 59.868 | 40.000 | 14.63 | 0.00 | 45.97 | 1.40 |
3187 | 3750 | 4.005650 | ACCTAAATGTGAGATGCAGTGTG | 58.994 | 43.478 | 0.00 | 0.00 | 0.00 | 3.82 |
3241 | 3804 | 9.973450 | ATATTCTACATAAGTAGTCAGTGCAAG | 57.027 | 33.333 | 5.12 | 0.00 | 46.30 | 4.01 |
3273 | 3836 | 1.916181 | TCTTCCTCCCCTTGATTGACC | 59.084 | 52.381 | 0.00 | 0.00 | 0.00 | 4.02 |
3274 | 3837 | 1.918957 | CTTCCTCCCCTTGATTGACCT | 59.081 | 52.381 | 0.00 | 0.00 | 0.00 | 3.85 |
3314 | 3886 | 1.896220 | TGTGCCAGGCTTGTCTTAAG | 58.104 | 50.000 | 14.15 | 0.00 | 0.00 | 1.85 |
3315 | 3887 | 1.419762 | TGTGCCAGGCTTGTCTTAAGA | 59.580 | 47.619 | 14.15 | 0.00 | 0.00 | 2.10 |
3357 | 3929 | 9.683069 | CTACAATGGATGGCAATTATTTTACTC | 57.317 | 33.333 | 0.00 | 0.00 | 0.00 | 2.59 |
3397 | 3969 | 3.761897 | AGCCAGGTTTGTTACTATTGCA | 58.238 | 40.909 | 0.00 | 0.00 | 0.00 | 4.08 |
3442 | 4014 | 4.493819 | ACTCCTGATATATGGTCCCACT | 57.506 | 45.455 | 0.00 | 0.00 | 0.00 | 4.00 |
3443 | 4015 | 4.832492 | ACTCCTGATATATGGTCCCACTT | 58.168 | 43.478 | 0.00 | 0.00 | 0.00 | 3.16 |
3445 | 4017 | 5.672194 | ACTCCTGATATATGGTCCCACTTTT | 59.328 | 40.000 | 0.00 | 0.00 | 0.00 | 2.27 |
3446 | 4018 | 6.160459 | ACTCCTGATATATGGTCCCACTTTTT | 59.840 | 38.462 | 0.00 | 0.00 | 0.00 | 1.94 |
3575 | 4514 | 9.832445 | AGAGGTATATTTATACACACACAAAGG | 57.168 | 33.333 | 9.35 | 0.00 | 40.16 | 3.11 |
3586 | 4525 | 6.796705 | ACACACACAAAGGCTAAACTATAC | 57.203 | 37.500 | 0.00 | 0.00 | 0.00 | 1.47 |
3639 | 4584 | 5.531122 | TGACAACACTTTGAGCTAGTAGT | 57.469 | 39.130 | 0.00 | 0.00 | 36.48 | 2.73 |
3695 | 4640 | 9.200817 | ACTTAATACTGTTTTGATGGCCAATAT | 57.799 | 29.630 | 10.96 | 0.00 | 34.23 | 1.28 |
3868 | 4815 | 5.709164 | ACATGTGGTCGTTAGTCTAGTACTT | 59.291 | 40.000 | 0.00 | 0.00 | 39.80 | 2.24 |
3915 | 4862 | 6.074516 | CGTTATTACATCCCATTGTACTCACG | 60.075 | 42.308 | 0.00 | 0.00 | 31.05 | 4.35 |
3921 | 4868 | 2.833794 | CCCATTGTACTCACGTATGGG | 58.166 | 52.381 | 14.32 | 14.32 | 45.59 | 4.00 |
3932 | 4879 | 6.726490 | ACTCACGTATGGGATGTAATAACT | 57.274 | 37.500 | 0.00 | 0.00 | 0.00 | 2.24 |
3933 | 4880 | 6.746120 | ACTCACGTATGGGATGTAATAACTC | 58.254 | 40.000 | 0.00 | 0.00 | 0.00 | 3.01 |
3990 | 4937 | 7.302184 | ACCTATTAGACTAGAATTCTGGCTCT | 58.698 | 38.462 | 18.47 | 19.27 | 0.00 | 4.09 |
3995 | 4942 | 4.889409 | AGACTAGAATTCTGGCTCTCTCAG | 59.111 | 45.833 | 18.47 | 6.40 | 0.00 | 3.35 |
4025 | 4973 | 3.435186 | GCAAGGGTCGAAGCTGGC | 61.435 | 66.667 | 0.00 | 0.00 | 0.00 | 4.85 |
4051 | 4999 | 3.426787 | TTCCGATTACTCTTTTGCCCA | 57.573 | 42.857 | 0.00 | 0.00 | 0.00 | 5.36 |
4084 | 5032 | 9.056005 | CATGAGATCTCCGTTATTTTTCCATTA | 57.944 | 33.333 | 20.03 | 0.00 | 0.00 | 1.90 |
4755 | 5703 | 7.819900 | AGTATTCAGACAACATAGTGAAGGTTC | 59.180 | 37.037 | 0.00 | 0.00 | 32.64 | 3.62 |
4803 | 5751 | 9.264719 | CAGCAAAAATCTTAAATTTCAGTTCCT | 57.735 | 29.630 | 0.00 | 0.00 | 0.00 | 3.36 |
4858 | 5806 | 5.212532 | TCTTGTTTGCATGCCAATTAGTT | 57.787 | 34.783 | 16.68 | 0.00 | 32.49 | 2.24 |
4878 | 5827 | 6.992063 | AGTTGTATTGCTATTTGTCAGAGG | 57.008 | 37.500 | 0.00 | 0.00 | 0.00 | 3.69 |
4885 | 5834 | 5.227569 | TGCTATTTGTCAGAGGAAACTGA | 57.772 | 39.130 | 0.00 | 0.00 | 44.43 | 3.41 |
4887 | 5836 | 5.877012 | TGCTATTTGTCAGAGGAAACTGATC | 59.123 | 40.000 | 0.00 | 0.00 | 46.36 | 2.92 |
4895 | 5844 | 5.290643 | GTCAGAGGAAACTGATCGATTTGAG | 59.709 | 44.000 | 0.00 | 0.00 | 46.36 | 3.02 |
4896 | 5845 | 5.185828 | TCAGAGGAAACTGATCGATTTGAGA | 59.814 | 40.000 | 0.00 | 0.00 | 44.43 | 3.27 |
4912 | 5861 | 0.608640 | GAGAACCCGCTCTCCTTTCA | 59.391 | 55.000 | 0.00 | 0.00 | 36.60 | 2.69 |
5276 | 6228 | 9.046296 | CGTTCTAATAAATGATTACTGCCTCTT | 57.954 | 33.333 | 0.00 | 0.00 | 0.00 | 2.85 |
5300 | 6254 | 2.409975 | CAGCTTTTCTTGGGCATTGTG | 58.590 | 47.619 | 0.00 | 0.00 | 0.00 | 3.33 |
5454 | 6410 | 0.674581 | TGATCAAGGGAGCAGCGTTG | 60.675 | 55.000 | 0.00 | 0.00 | 33.81 | 4.10 |
5455 | 6411 | 0.674895 | GATCAAGGGAGCAGCGTTGT | 60.675 | 55.000 | 0.00 | 0.00 | 0.00 | 3.32 |
5457 | 6413 | 1.165907 | TCAAGGGAGCAGCGTTGTTG | 61.166 | 55.000 | 0.00 | 0.00 | 0.00 | 3.33 |
5458 | 6414 | 1.148273 | AAGGGAGCAGCGTTGTTGA | 59.852 | 52.632 | 0.00 | 0.00 | 0.00 | 3.18 |
5459 | 6415 | 0.886490 | AAGGGAGCAGCGTTGTTGAG | 60.886 | 55.000 | 0.00 | 0.00 | 0.00 | 3.02 |
5507 | 6463 | 3.196469 | TGAGTCATCCTTTGAGGCTAGTG | 59.804 | 47.826 | 0.00 | 0.00 | 34.61 | 2.74 |
5533 | 6489 | 7.370383 | GGCTACAATGTTCAAAAGATTCTTCA | 58.630 | 34.615 | 0.00 | 0.00 | 0.00 | 3.02 |
5581 | 6537 | 8.450964 | AGGTAAATAATCATTGAAGTGAACACG | 58.549 | 33.333 | 0.00 | 0.00 | 36.20 | 4.49 |
5661 | 6618 | 4.104420 | AGAGGATGAAGGCTGATTGCTATT | 59.896 | 41.667 | 0.00 | 0.00 | 42.39 | 1.73 |
5828 | 8484 | 8.980481 | TTGAGGAAGATGTTAGACTTCTTTTT | 57.020 | 30.769 | 9.63 | 3.51 | 41.04 | 1.94 |
5870 | 8526 | 1.283347 | ATGCCGGGCAGATCTCATAT | 58.717 | 50.000 | 27.62 | 3.79 | 43.65 | 1.78 |
5949 | 8605 | 3.340814 | CATCCTGCCAGATGGTATACC | 57.659 | 52.381 | 15.50 | 15.50 | 40.03 | 2.73 |
5995 | 8651 | 5.989551 | TTCGTTACAGTTACCTTGGTTTC | 57.010 | 39.130 | 0.00 | 0.00 | 0.00 | 2.78 |
5999 | 8655 | 5.050567 | CGTTACAGTTACCTTGGTTTCTGAC | 60.051 | 44.000 | 21.25 | 13.36 | 0.00 | 3.51 |
6046 | 8702 | 6.094603 | GGCATAGCACCCTTGAATATATTCAG | 59.905 | 42.308 | 23.61 | 16.61 | 46.34 | 3.02 |
6066 | 8722 | 7.724305 | TTCAGTTAATGAACCACTTGTACTC | 57.276 | 36.000 | 0.00 | 0.00 | 43.09 | 2.59 |
6067 | 8723 | 7.062749 | TCAGTTAATGAACCACTTGTACTCT | 57.937 | 36.000 | 0.00 | 0.00 | 36.08 | 3.24 |
6068 | 8724 | 6.929049 | TCAGTTAATGAACCACTTGTACTCTG | 59.071 | 38.462 | 0.00 | 0.00 | 36.08 | 3.35 |
6097 | 8753 | 3.306641 | CCTCTCTCCCATTATACTGCTGC | 60.307 | 52.174 | 0.00 | 0.00 | 0.00 | 5.25 |
6103 | 8759 | 1.605710 | CCATTATACTGCTGCAGTGCC | 59.394 | 52.381 | 37.89 | 0.00 | 45.01 | 5.01 |
6105 | 8761 | 0.461870 | TTATACTGCTGCAGTGCCCG | 60.462 | 55.000 | 37.89 | 13.61 | 45.01 | 6.13 |
6111 | 8767 | 3.357079 | CTGCAGTGCCCGTTGGTC | 61.357 | 66.667 | 13.72 | 0.00 | 0.00 | 4.02 |
6112 | 8768 | 3.832237 | CTGCAGTGCCCGTTGGTCT | 62.832 | 63.158 | 13.72 | 0.00 | 0.00 | 3.85 |
6113 | 8769 | 3.050275 | GCAGTGCCCGTTGGTCTC | 61.050 | 66.667 | 2.85 | 0.00 | 0.00 | 3.36 |
6114 | 8770 | 2.425592 | CAGTGCCCGTTGGTCTCA | 59.574 | 61.111 | 0.00 | 0.00 | 0.00 | 3.27 |
6115 | 8771 | 1.003355 | CAGTGCCCGTTGGTCTCAT | 60.003 | 57.895 | 0.00 | 0.00 | 0.00 | 2.90 |
6116 | 8772 | 1.003355 | AGTGCCCGTTGGTCTCATG | 60.003 | 57.895 | 0.00 | 0.00 | 0.00 | 3.07 |
6145 | 8801 | 5.734503 | GCACCTTATTGCAAGATTAGGAAGC | 60.735 | 44.000 | 16.79 | 15.08 | 42.49 | 3.86 |
6157 | 8813 | 4.290459 | AGATTAGGAAGCCATGATATGCCA | 59.710 | 41.667 | 0.00 | 0.00 | 0.00 | 4.92 |
6180 | 8836 | 4.822685 | TGGGATGTTTCCATGGAAAATG | 57.177 | 40.909 | 35.70 | 0.00 | 44.40 | 2.32 |
6182 | 8838 | 5.336945 | TGGGATGTTTCCATGGAAAATGTA | 58.663 | 37.500 | 35.70 | 23.50 | 44.40 | 2.29 |
6194 | 8850 | 2.689983 | GGAAAATGTAGAGGCCATGTGG | 59.310 | 50.000 | 5.01 | 0.00 | 38.53 | 4.17 |
6235 | 8891 | 7.281841 | TCAGTGATATCTGGAAATGCATGTAA | 58.718 | 34.615 | 0.00 | 0.00 | 36.25 | 2.41 |
6317 | 8973 | 5.470368 | CCGTTCTCAAGTAGTCAAATCTCA | 58.530 | 41.667 | 0.00 | 0.00 | 0.00 | 3.27 |
6320 | 8976 | 7.284351 | CGTTCTCAAGTAGTCAAATCTCAAAC | 58.716 | 38.462 | 0.00 | 0.00 | 0.00 | 2.93 |
6361 | 9017 | 3.323403 | GCTGGATGTGGAAGTATAGCTCT | 59.677 | 47.826 | 0.00 | 0.00 | 0.00 | 4.09 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
2 | 3 | 3.243839 | GGCAATTTTCAGGTCAAGCTTGA | 60.244 | 43.478 | 25.16 | 25.16 | 34.20 | 3.02 |
3 | 4 | 3.062042 | GGCAATTTTCAGGTCAAGCTTG | 58.938 | 45.455 | 20.81 | 20.81 | 0.00 | 4.01 |
4 | 5 | 2.037641 | GGGCAATTTTCAGGTCAAGCTT | 59.962 | 45.455 | 0.00 | 0.00 | 0.00 | 3.74 |
5 | 6 | 1.620323 | GGGCAATTTTCAGGTCAAGCT | 59.380 | 47.619 | 0.00 | 0.00 | 0.00 | 3.74 |
6 | 7 | 1.669795 | CGGGCAATTTTCAGGTCAAGC | 60.670 | 52.381 | 0.00 | 0.00 | 0.00 | 4.01 |
7 | 8 | 1.067635 | CCGGGCAATTTTCAGGTCAAG | 60.068 | 52.381 | 0.00 | 0.00 | 0.00 | 3.02 |
8 | 9 | 0.965439 | CCGGGCAATTTTCAGGTCAA | 59.035 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
9 | 10 | 0.111446 | TCCGGGCAATTTTCAGGTCA | 59.889 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
10 | 11 | 0.811281 | CTCCGGGCAATTTTCAGGTC | 59.189 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
11 | 12 | 0.112412 | ACTCCGGGCAATTTTCAGGT | 59.888 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
12 | 13 | 1.202348 | GAACTCCGGGCAATTTTCAGG | 59.798 | 52.381 | 0.00 | 0.00 | 0.00 | 3.86 |
13 | 14 | 2.162681 | AGAACTCCGGGCAATTTTCAG | 58.837 | 47.619 | 0.00 | 0.00 | 0.00 | 3.02 |
14 | 15 | 2.286365 | AGAACTCCGGGCAATTTTCA | 57.714 | 45.000 | 0.00 | 0.00 | 0.00 | 2.69 |
15 | 16 | 4.983671 | AATAGAACTCCGGGCAATTTTC | 57.016 | 40.909 | 0.00 | 0.00 | 0.00 | 2.29 |
16 | 17 | 7.418337 | AAATAATAGAACTCCGGGCAATTTT | 57.582 | 32.000 | 0.00 | 0.00 | 0.00 | 1.82 |
17 | 18 | 7.418337 | AAAATAATAGAACTCCGGGCAATTT | 57.582 | 32.000 | 0.00 | 0.00 | 0.00 | 1.82 |
18 | 19 | 7.418337 | AAAAATAATAGAACTCCGGGCAATT | 57.582 | 32.000 | 0.00 | 0.00 | 0.00 | 2.32 |
19 | 20 | 8.706322 | ATAAAAATAATAGAACTCCGGGCAAT | 57.294 | 30.769 | 0.00 | 0.00 | 0.00 | 3.56 |
20 | 21 | 8.528044 | AATAAAAATAATAGAACTCCGGGCAA | 57.472 | 30.769 | 0.00 | 0.00 | 0.00 | 4.52 |
21 | 22 | 9.059260 | GTAATAAAAATAATAGAACTCCGGGCA | 57.941 | 33.333 | 0.00 | 0.00 | 0.00 | 5.36 |
22 | 23 | 9.281371 | AGTAATAAAAATAATAGAACTCCGGGC | 57.719 | 33.333 | 0.00 | 0.00 | 0.00 | 6.13 |
38 | 39 | 9.886132 | GGGAGACTCATCACTTAGTAATAAAAA | 57.114 | 33.333 | 4.53 | 0.00 | 0.00 | 1.94 |
39 | 40 | 9.268282 | AGGGAGACTCATCACTTAGTAATAAAA | 57.732 | 33.333 | 4.53 | 0.00 | 23.88 | 1.52 |
40 | 41 | 8.840200 | AGGGAGACTCATCACTTAGTAATAAA | 57.160 | 34.615 | 4.53 | 0.00 | 23.88 | 1.40 |
41 | 42 | 8.466617 | GAGGGAGACTCATCACTTAGTAATAA | 57.533 | 38.462 | 4.53 | 0.00 | 45.85 | 1.40 |
43 | 44 | 6.969993 | GAGGGAGACTCATCACTTAGTAAT | 57.030 | 41.667 | 4.53 | 0.00 | 45.85 | 1.89 |
56 | 57 | 5.470047 | TGAAAAGTTACTGAGGGAGACTC | 57.530 | 43.478 | 0.00 | 0.00 | 46.78 | 3.36 |
57 | 58 | 5.888982 | TTGAAAAGTTACTGAGGGAGACT | 57.111 | 39.130 | 0.00 | 0.00 | 0.00 | 3.24 |
58 | 59 | 7.660208 | TGTAATTGAAAAGTTACTGAGGGAGAC | 59.340 | 37.037 | 0.00 | 0.00 | 33.17 | 3.36 |
59 | 60 | 7.741785 | TGTAATTGAAAAGTTACTGAGGGAGA | 58.258 | 34.615 | 0.00 | 0.00 | 33.17 | 3.71 |
60 | 61 | 7.979444 | TGTAATTGAAAAGTTACTGAGGGAG | 57.021 | 36.000 | 0.00 | 0.00 | 33.17 | 4.30 |
61 | 62 | 7.996644 | ACTTGTAATTGAAAAGTTACTGAGGGA | 59.003 | 33.333 | 0.00 | 0.00 | 33.17 | 4.20 |
62 | 63 | 8.166422 | ACTTGTAATTGAAAAGTTACTGAGGG | 57.834 | 34.615 | 0.00 | 0.00 | 33.17 | 4.30 |
99 | 100 | 9.220767 | GGTAGAGAATGAAAGTTTCTATGTGTT | 57.779 | 33.333 | 16.33 | 2.80 | 33.65 | 3.32 |
100 | 101 | 8.375506 | TGGTAGAGAATGAAAGTTTCTATGTGT | 58.624 | 33.333 | 16.33 | 5.47 | 33.65 | 3.72 |
101 | 102 | 8.777865 | TGGTAGAGAATGAAAGTTTCTATGTG | 57.222 | 34.615 | 16.33 | 0.00 | 33.65 | 3.21 |
102 | 103 | 9.388506 | CATGGTAGAGAATGAAAGTTTCTATGT | 57.611 | 33.333 | 16.33 | 4.18 | 33.65 | 2.29 |
103 | 104 | 9.388506 | ACATGGTAGAGAATGAAAGTTTCTATG | 57.611 | 33.333 | 16.33 | 4.07 | 33.65 | 2.23 |
104 | 105 | 9.606631 | GACATGGTAGAGAATGAAAGTTTCTAT | 57.393 | 33.333 | 16.33 | 5.41 | 33.65 | 1.98 |
105 | 106 | 8.041323 | GGACATGGTAGAGAATGAAAGTTTCTA | 58.959 | 37.037 | 16.33 | 4.00 | 33.65 | 2.10 |
106 | 107 | 6.881602 | GGACATGGTAGAGAATGAAAGTTTCT | 59.118 | 38.462 | 16.33 | 0.00 | 36.16 | 2.52 |
107 | 108 | 6.183360 | CGGACATGGTAGAGAATGAAAGTTTC | 60.183 | 42.308 | 8.75 | 8.75 | 0.00 | 2.78 |
108 | 109 | 5.643777 | CGGACATGGTAGAGAATGAAAGTTT | 59.356 | 40.000 | 0.00 | 0.00 | 0.00 | 2.66 |
109 | 110 | 5.178797 | CGGACATGGTAGAGAATGAAAGTT | 58.821 | 41.667 | 0.00 | 0.00 | 0.00 | 2.66 |
110 | 111 | 4.383118 | CCGGACATGGTAGAGAATGAAAGT | 60.383 | 45.833 | 0.00 | 0.00 | 0.00 | 2.66 |
111 | 112 | 4.122776 | CCGGACATGGTAGAGAATGAAAG | 58.877 | 47.826 | 0.00 | 0.00 | 0.00 | 2.62 |
112 | 113 | 3.772572 | TCCGGACATGGTAGAGAATGAAA | 59.227 | 43.478 | 0.00 | 0.00 | 0.00 | 2.69 |
113 | 114 | 3.371034 | TCCGGACATGGTAGAGAATGAA | 58.629 | 45.455 | 0.00 | 0.00 | 0.00 | 2.57 |
114 | 115 | 3.026707 | TCCGGACATGGTAGAGAATGA | 57.973 | 47.619 | 0.00 | 0.00 | 0.00 | 2.57 |
115 | 116 | 3.384789 | TCTTCCGGACATGGTAGAGAATG | 59.615 | 47.826 | 1.83 | 0.00 | 31.31 | 2.67 |
116 | 117 | 3.643237 | TCTTCCGGACATGGTAGAGAAT | 58.357 | 45.455 | 1.83 | 0.00 | 31.31 | 2.40 |
117 | 118 | 3.095912 | TCTTCCGGACATGGTAGAGAA | 57.904 | 47.619 | 1.83 | 0.00 | 31.31 | 2.87 |
118 | 119 | 2.820728 | TCTTCCGGACATGGTAGAGA | 57.179 | 50.000 | 1.83 | 0.00 | 31.31 | 3.10 |
119 | 120 | 6.378564 | ACATATATCTTCCGGACATGGTAGAG | 59.621 | 42.308 | 1.83 | 0.00 | 38.60 | 2.43 |
120 | 121 | 6.152831 | CACATATATCTTCCGGACATGGTAGA | 59.847 | 42.308 | 1.83 | 3.08 | 39.39 | 2.59 |
121 | 122 | 6.152831 | TCACATATATCTTCCGGACATGGTAG | 59.847 | 42.308 | 1.83 | 0.00 | 0.00 | 3.18 |
122 | 123 | 6.014012 | TCACATATATCTTCCGGACATGGTA | 58.986 | 40.000 | 1.83 | 0.00 | 0.00 | 3.25 |
123 | 124 | 4.838423 | TCACATATATCTTCCGGACATGGT | 59.162 | 41.667 | 1.83 | 0.00 | 0.00 | 3.55 |
124 | 125 | 5.405935 | TCACATATATCTTCCGGACATGG | 57.594 | 43.478 | 1.83 | 0.00 | 0.00 | 3.66 |
125 | 126 | 6.401394 | ACATCACATATATCTTCCGGACATG | 58.599 | 40.000 | 1.83 | 3.78 | 0.00 | 3.21 |
126 | 127 | 6.611613 | ACATCACATATATCTTCCGGACAT | 57.388 | 37.500 | 1.83 | 1.17 | 0.00 | 3.06 |
127 | 128 | 6.419484 | AACATCACATATATCTTCCGGACA | 57.581 | 37.500 | 1.83 | 0.00 | 0.00 | 4.02 |
128 | 129 | 7.441157 | TCAAAACATCACATATATCTTCCGGAC | 59.559 | 37.037 | 1.83 | 0.00 | 0.00 | 4.79 |
129 | 130 | 7.505258 | TCAAAACATCACATATATCTTCCGGA | 58.495 | 34.615 | 0.00 | 0.00 | 0.00 | 5.14 |
130 | 131 | 7.095060 | CCTCAAAACATCACATATATCTTCCGG | 60.095 | 40.741 | 0.00 | 0.00 | 0.00 | 5.14 |
131 | 132 | 7.657354 | TCCTCAAAACATCACATATATCTTCCG | 59.343 | 37.037 | 0.00 | 0.00 | 0.00 | 4.30 |
132 | 133 | 8.908786 | TCCTCAAAACATCACATATATCTTCC | 57.091 | 34.615 | 0.00 | 0.00 | 0.00 | 3.46 |
133 | 134 | 8.502387 | GCTCCTCAAAACATCACATATATCTTC | 58.498 | 37.037 | 0.00 | 0.00 | 0.00 | 2.87 |
134 | 135 | 7.994911 | TGCTCCTCAAAACATCACATATATCTT | 59.005 | 33.333 | 0.00 | 0.00 | 0.00 | 2.40 |
135 | 136 | 7.443575 | GTGCTCCTCAAAACATCACATATATCT | 59.556 | 37.037 | 0.00 | 0.00 | 0.00 | 1.98 |
136 | 137 | 7.570140 | CGTGCTCCTCAAAACATCACATATATC | 60.570 | 40.741 | 0.00 | 0.00 | 0.00 | 1.63 |
137 | 138 | 6.203530 | CGTGCTCCTCAAAACATCACATATAT | 59.796 | 38.462 | 0.00 | 0.00 | 0.00 | 0.86 |
138 | 139 | 5.523552 | CGTGCTCCTCAAAACATCACATATA | 59.476 | 40.000 | 0.00 | 0.00 | 0.00 | 0.86 |
139 | 140 | 4.333649 | CGTGCTCCTCAAAACATCACATAT | 59.666 | 41.667 | 0.00 | 0.00 | 0.00 | 1.78 |
140 | 141 | 3.684305 | CGTGCTCCTCAAAACATCACATA | 59.316 | 43.478 | 0.00 | 0.00 | 0.00 | 2.29 |
141 | 142 | 2.485426 | CGTGCTCCTCAAAACATCACAT | 59.515 | 45.455 | 0.00 | 0.00 | 0.00 | 3.21 |
142 | 143 | 1.872952 | CGTGCTCCTCAAAACATCACA | 59.127 | 47.619 | 0.00 | 0.00 | 0.00 | 3.58 |
143 | 144 | 2.143122 | TCGTGCTCCTCAAAACATCAC | 58.857 | 47.619 | 0.00 | 0.00 | 0.00 | 3.06 |
144 | 145 | 2.542020 | TCGTGCTCCTCAAAACATCA | 57.458 | 45.000 | 0.00 | 0.00 | 0.00 | 3.07 |
145 | 146 | 3.896648 | TTTCGTGCTCCTCAAAACATC | 57.103 | 42.857 | 0.00 | 0.00 | 0.00 | 3.06 |
146 | 147 | 4.647424 | TTTTTCGTGCTCCTCAAAACAT | 57.353 | 36.364 | 0.00 | 0.00 | 0.00 | 2.71 |
147 | 148 | 4.358851 | CATTTTTCGTGCTCCTCAAAACA | 58.641 | 39.130 | 0.00 | 0.00 | 0.00 | 2.83 |
148 | 149 | 3.735746 | CCATTTTTCGTGCTCCTCAAAAC | 59.264 | 43.478 | 0.00 | 0.00 | 0.00 | 2.43 |
149 | 150 | 3.634448 | TCCATTTTTCGTGCTCCTCAAAA | 59.366 | 39.130 | 0.00 | 0.00 | 0.00 | 2.44 |
150 | 151 | 3.218453 | TCCATTTTTCGTGCTCCTCAAA | 58.782 | 40.909 | 0.00 | 0.00 | 0.00 | 2.69 |
151 | 152 | 2.857483 | TCCATTTTTCGTGCTCCTCAA | 58.143 | 42.857 | 0.00 | 0.00 | 0.00 | 3.02 |
152 | 153 | 2.552315 | GTTCCATTTTTCGTGCTCCTCA | 59.448 | 45.455 | 0.00 | 0.00 | 0.00 | 3.86 |
153 | 154 | 2.412847 | CGTTCCATTTTTCGTGCTCCTC | 60.413 | 50.000 | 0.00 | 0.00 | 0.00 | 3.71 |
154 | 155 | 1.535462 | CGTTCCATTTTTCGTGCTCCT | 59.465 | 47.619 | 0.00 | 0.00 | 0.00 | 3.69 |
155 | 156 | 1.533731 | TCGTTCCATTTTTCGTGCTCC | 59.466 | 47.619 | 0.00 | 0.00 | 0.00 | 4.70 |
156 | 157 | 2.961522 | TCGTTCCATTTTTCGTGCTC | 57.038 | 45.000 | 0.00 | 0.00 | 0.00 | 4.26 |
157 | 158 | 3.074412 | AGATCGTTCCATTTTTCGTGCT | 58.926 | 40.909 | 0.00 | 0.00 | 0.00 | 4.40 |
158 | 159 | 3.471495 | AGATCGTTCCATTTTTCGTGC | 57.529 | 42.857 | 0.00 | 0.00 | 0.00 | 5.34 |
159 | 160 | 4.851558 | GGAAAGATCGTTCCATTTTTCGTG | 59.148 | 41.667 | 28.89 | 0.00 | 45.57 | 4.35 |
160 | 161 | 5.043189 | GGAAAGATCGTTCCATTTTTCGT | 57.957 | 39.130 | 28.89 | 0.00 | 45.57 | 3.85 |
169 | 170 | 5.524281 | GGTCAATAGAAGGAAAGATCGTTCC | 59.476 | 44.000 | 27.27 | 27.27 | 46.63 | 3.62 |
170 | 171 | 6.036191 | GTGGTCAATAGAAGGAAAGATCGTTC | 59.964 | 42.308 | 12.39 | 12.39 | 46.09 | 3.95 |
171 | 172 | 5.875359 | GTGGTCAATAGAAGGAAAGATCGTT | 59.125 | 40.000 | 0.00 | 0.00 | 36.42 | 3.85 |
172 | 173 | 5.420409 | GTGGTCAATAGAAGGAAAGATCGT | 58.580 | 41.667 | 0.00 | 0.00 | 0.00 | 3.73 |
173 | 174 | 4.811557 | GGTGGTCAATAGAAGGAAAGATCG | 59.188 | 45.833 | 0.00 | 0.00 | 0.00 | 3.69 |
174 | 175 | 5.745227 | TGGTGGTCAATAGAAGGAAAGATC | 58.255 | 41.667 | 0.00 | 0.00 | 0.00 | 2.75 |
175 | 176 | 5.779241 | TGGTGGTCAATAGAAGGAAAGAT | 57.221 | 39.130 | 0.00 | 0.00 | 0.00 | 2.40 |
176 | 177 | 5.779241 | ATGGTGGTCAATAGAAGGAAAGA | 57.221 | 39.130 | 0.00 | 0.00 | 0.00 | 2.52 |
177 | 178 | 5.358160 | GGAATGGTGGTCAATAGAAGGAAAG | 59.642 | 44.000 | 0.00 | 0.00 | 0.00 | 2.62 |
178 | 179 | 5.222233 | TGGAATGGTGGTCAATAGAAGGAAA | 60.222 | 40.000 | 0.00 | 0.00 | 0.00 | 3.13 |
179 | 180 | 4.290985 | TGGAATGGTGGTCAATAGAAGGAA | 59.709 | 41.667 | 0.00 | 0.00 | 0.00 | 3.36 |
180 | 181 | 3.849574 | TGGAATGGTGGTCAATAGAAGGA | 59.150 | 43.478 | 0.00 | 0.00 | 0.00 | 3.36 |
181 | 182 | 3.947834 | GTGGAATGGTGGTCAATAGAAGG | 59.052 | 47.826 | 0.00 | 0.00 | 0.00 | 3.46 |
182 | 183 | 4.588899 | TGTGGAATGGTGGTCAATAGAAG | 58.411 | 43.478 | 0.00 | 0.00 | 0.00 | 2.85 |
183 | 184 | 4.649267 | TGTGGAATGGTGGTCAATAGAA | 57.351 | 40.909 | 0.00 | 0.00 | 0.00 | 2.10 |
184 | 185 | 4.474651 | AGATGTGGAATGGTGGTCAATAGA | 59.525 | 41.667 | 0.00 | 0.00 | 0.00 | 1.98 |
185 | 186 | 4.785301 | AGATGTGGAATGGTGGTCAATAG | 58.215 | 43.478 | 0.00 | 0.00 | 0.00 | 1.73 |
186 | 187 | 4.860802 | AGATGTGGAATGGTGGTCAATA | 57.139 | 40.909 | 0.00 | 0.00 | 0.00 | 1.90 |
187 | 188 | 3.744940 | AGATGTGGAATGGTGGTCAAT | 57.255 | 42.857 | 0.00 | 0.00 | 0.00 | 2.57 |
188 | 189 | 3.524095 | AAGATGTGGAATGGTGGTCAA | 57.476 | 42.857 | 0.00 | 0.00 | 0.00 | 3.18 |
189 | 190 | 3.156293 | CAAAGATGTGGAATGGTGGTCA | 58.844 | 45.455 | 0.00 | 0.00 | 0.00 | 4.02 |
190 | 191 | 3.157087 | ACAAAGATGTGGAATGGTGGTC | 58.843 | 45.455 | 0.00 | 0.00 | 38.69 | 4.02 |
191 | 192 | 3.243359 | ACAAAGATGTGGAATGGTGGT | 57.757 | 42.857 | 0.00 | 0.00 | 38.69 | 4.16 |
192 | 193 | 3.828451 | AGAACAAAGATGTGGAATGGTGG | 59.172 | 43.478 | 0.00 | 0.00 | 40.46 | 4.61 |
193 | 194 | 5.458041 | AAGAACAAAGATGTGGAATGGTG | 57.542 | 39.130 | 0.00 | 0.00 | 40.46 | 4.17 |
194 | 195 | 7.781324 | ATAAAGAACAAAGATGTGGAATGGT | 57.219 | 32.000 | 0.00 | 0.00 | 40.46 | 3.55 |
195 | 196 | 9.492973 | AAAATAAAGAACAAAGATGTGGAATGG | 57.507 | 29.630 | 0.00 | 0.00 | 40.46 | 3.16 |
266 | 267 | 6.477053 | TTGAGAAATGGGTTTGATGTCAAA | 57.523 | 33.333 | 4.16 | 4.16 | 42.90 | 2.69 |
267 | 268 | 6.477053 | TTTGAGAAATGGGTTTGATGTCAA | 57.523 | 33.333 | 0.00 | 0.00 | 0.00 | 3.18 |
268 | 269 | 6.477053 | TTTTGAGAAATGGGTTTGATGTCA | 57.523 | 33.333 | 0.00 | 0.00 | 0.00 | 3.58 |
269 | 270 | 7.874528 | AGAATTTTGAGAAATGGGTTTGATGTC | 59.125 | 33.333 | 0.00 | 0.00 | 35.69 | 3.06 |
270 | 271 | 7.738847 | AGAATTTTGAGAAATGGGTTTGATGT | 58.261 | 30.769 | 0.00 | 0.00 | 35.69 | 3.06 |
271 | 272 | 8.500773 | CAAGAATTTTGAGAAATGGGTTTGATG | 58.499 | 33.333 | 0.00 | 0.00 | 35.69 | 3.07 |
272 | 273 | 8.212995 | ACAAGAATTTTGAGAAATGGGTTTGAT | 58.787 | 29.630 | 7.18 | 0.00 | 35.69 | 2.57 |
273 | 274 | 7.563906 | ACAAGAATTTTGAGAAATGGGTTTGA | 58.436 | 30.769 | 7.18 | 0.00 | 35.69 | 2.69 |
274 | 275 | 7.790823 | ACAAGAATTTTGAGAAATGGGTTTG | 57.209 | 32.000 | 7.18 | 0.00 | 35.69 | 2.93 |
275 | 276 | 8.704668 | ACTACAAGAATTTTGAGAAATGGGTTT | 58.295 | 29.630 | 7.18 | 0.00 | 35.69 | 3.27 |
276 | 277 | 8.143835 | CACTACAAGAATTTTGAGAAATGGGTT | 58.856 | 33.333 | 7.18 | 0.00 | 35.69 | 4.11 |
277 | 278 | 7.287696 | ACACTACAAGAATTTTGAGAAATGGGT | 59.712 | 33.333 | 7.18 | 0.00 | 35.69 | 4.51 |
278 | 279 | 7.661040 | ACACTACAAGAATTTTGAGAAATGGG | 58.339 | 34.615 | 7.18 | 0.00 | 35.69 | 4.00 |
282 | 283 | 9.403583 | ACCTAACACTACAAGAATTTTGAGAAA | 57.596 | 29.630 | 7.18 | 0.00 | 0.00 | 2.52 |
283 | 284 | 8.836413 | CACCTAACACTACAAGAATTTTGAGAA | 58.164 | 33.333 | 7.18 | 0.00 | 0.00 | 2.87 |
284 | 285 | 7.444183 | CCACCTAACACTACAAGAATTTTGAGA | 59.556 | 37.037 | 7.18 | 0.00 | 0.00 | 3.27 |
285 | 286 | 7.444183 | TCCACCTAACACTACAAGAATTTTGAG | 59.556 | 37.037 | 7.18 | 4.18 | 0.00 | 3.02 |
286 | 287 | 7.227910 | GTCCACCTAACACTACAAGAATTTTGA | 59.772 | 37.037 | 7.18 | 0.00 | 0.00 | 2.69 |
287 | 288 | 7.360361 | GTCCACCTAACACTACAAGAATTTTG | 58.640 | 38.462 | 0.00 | 0.00 | 0.00 | 2.44 |
292 | 293 | 3.325716 | GGGTCCACCTAACACTACAAGAA | 59.674 | 47.826 | 0.00 | 0.00 | 35.85 | 2.52 |
311 | 312 | 2.599757 | GGTGGGCTTAAGGACGGGT | 61.600 | 63.158 | 4.29 | 0.00 | 0.00 | 5.28 |
368 | 369 | 3.451902 | ACCCCGGATATGTTTTCTTCGTA | 59.548 | 43.478 | 0.73 | 0.00 | 0.00 | 3.43 |
381 | 382 | 2.516227 | TGCATTTTCAACCCCGGATA | 57.484 | 45.000 | 0.73 | 0.00 | 0.00 | 2.59 |
382 | 383 | 1.638529 | TTGCATTTTCAACCCCGGAT | 58.361 | 45.000 | 0.73 | 0.00 | 0.00 | 4.18 |
383 | 384 | 1.342819 | CTTTGCATTTTCAACCCCGGA | 59.657 | 47.619 | 0.73 | 0.00 | 0.00 | 5.14 |
1056 | 1058 | 2.076803 | GGCGGAGGATTTAGGGGGT | 61.077 | 63.158 | 0.00 | 0.00 | 0.00 | 4.95 |
1074 | 1076 | 3.953828 | AAAAAGGAGGGGAGGGGG | 58.046 | 61.111 | 0.00 | 0.00 | 0.00 | 5.40 |
1170 | 1570 | 2.228822 | GCCATGTCACGGAAAACAGAAT | 59.771 | 45.455 | 0.00 | 0.00 | 0.00 | 2.40 |
1256 | 1662 | 2.483876 | TCACGAGCAGAGAACCAAAAG | 58.516 | 47.619 | 0.00 | 0.00 | 0.00 | 2.27 |
1259 | 1665 | 1.138069 | TGTTCACGAGCAGAGAACCAA | 59.862 | 47.619 | 15.61 | 1.31 | 45.72 | 3.67 |
1296 | 1702 | 1.073722 | CAGGAGTCCAGGCTGCAAA | 59.926 | 57.895 | 12.86 | 0.00 | 0.00 | 3.68 |
1298 | 1704 | 3.324930 | CCAGGAGTCCAGGCTGCA | 61.325 | 66.667 | 12.86 | 0.00 | 0.00 | 4.41 |
1328 | 1734 | 0.820226 | TCAGAGCGCATCTTGCTAGT | 59.180 | 50.000 | 11.47 | 0.00 | 44.18 | 2.57 |
1362 | 1768 | 3.939592 | TCAGTACATCTCGACACTGGTAG | 59.060 | 47.826 | 0.00 | 0.00 | 39.09 | 3.18 |
1370 | 1776 | 3.851976 | ACTGGTTCAGTACATCTCGAC | 57.148 | 47.619 | 0.00 | 0.00 | 43.46 | 4.20 |
1466 | 1967 | 1.702957 | CCAACTCACTAAGGGGGACAA | 59.297 | 52.381 | 0.00 | 0.00 | 0.00 | 3.18 |
1467 | 1968 | 1.358152 | CCAACTCACTAAGGGGGACA | 58.642 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
1469 | 1970 | 1.132657 | TGACCAACTCACTAAGGGGGA | 60.133 | 52.381 | 0.00 | 0.00 | 0.00 | 4.81 |
1475 | 1976 | 4.908601 | ATGACCATGACCAACTCACTAA | 57.091 | 40.909 | 0.00 | 0.00 | 0.00 | 2.24 |
1518 | 2020 | 7.483691 | GCTTATTTAACTATTGTTGGTCAACCG | 59.516 | 37.037 | 10.83 | 1.12 | 40.46 | 4.44 |
1592 | 2096 | 9.512588 | AATCAGAAACACTCATAAGAAGACATT | 57.487 | 29.630 | 0.00 | 0.00 | 0.00 | 2.71 |
1593 | 2097 | 8.944029 | CAATCAGAAACACTCATAAGAAGACAT | 58.056 | 33.333 | 0.00 | 0.00 | 0.00 | 3.06 |
1604 | 2108 | 6.822667 | ATGTAATGCAATCAGAAACACTCA | 57.177 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
1650 | 2154 | 2.574006 | TGCCATTGCTCTGAGAAAGT | 57.426 | 45.000 | 9.28 | 0.00 | 38.71 | 2.66 |
1653 | 2157 | 2.574006 | ACTTGCCATTGCTCTGAGAA | 57.426 | 45.000 | 9.28 | 0.00 | 38.71 | 2.87 |
1680 | 2184 | 2.154854 | ATGGAATGGTCGCATAGTCG | 57.845 | 50.000 | 0.00 | 0.00 | 0.00 | 4.18 |
1713 | 2217 | 7.620880 | AGAGTTGCAGTATATGTACCTTGAAA | 58.379 | 34.615 | 0.00 | 0.00 | 0.00 | 2.69 |
1729 | 2233 | 4.272991 | GCATAAGATTCCAGAGAGTTGCAG | 59.727 | 45.833 | 0.00 | 0.00 | 0.00 | 4.41 |
1735 | 2239 | 5.642919 | GGCAATAGCATAAGATTCCAGAGAG | 59.357 | 44.000 | 0.00 | 0.00 | 44.61 | 3.20 |
1765 | 2269 | 8.893563 | AAAACAGATATATTGGTCCCAGAAAA | 57.106 | 30.769 | 0.00 | 0.00 | 0.00 | 2.29 |
1766 | 2270 | 9.983024 | TTAAAACAGATATATTGGTCCCAGAAA | 57.017 | 29.630 | 0.00 | 0.00 | 0.00 | 2.52 |
1767 | 2271 | 9.403583 | GTTAAAACAGATATATTGGTCCCAGAA | 57.596 | 33.333 | 0.00 | 0.00 | 0.00 | 3.02 |
1771 | 2275 | 7.064229 | TGGGTTAAAACAGATATATTGGTCCC | 58.936 | 38.462 | 0.00 | 0.00 | 0.00 | 4.46 |
1796 | 2301 | 7.928706 | GTCTCCTACTCTACATATTTGCAACAT | 59.071 | 37.037 | 0.00 | 0.00 | 0.00 | 2.71 |
1845 | 2351 | 4.214545 | TGTTTGCACCACTTAGGATAAACG | 59.785 | 41.667 | 0.00 | 0.00 | 41.22 | 3.60 |
1848 | 2354 | 5.321102 | ACATGTTTGCACCACTTAGGATAA | 58.679 | 37.500 | 0.00 | 0.00 | 41.22 | 1.75 |
1875 | 2381 | 4.778213 | AATTCATAGTCTGCTGGCCTAA | 57.222 | 40.909 | 3.32 | 0.00 | 0.00 | 2.69 |
1929 | 2438 | 7.352079 | TGAATCACTGTCTTCTGCATATCTA | 57.648 | 36.000 | 0.00 | 0.00 | 0.00 | 1.98 |
2127 | 2637 | 4.020573 | TGGATCAACATAAGTCAAGGTCGT | 60.021 | 41.667 | 0.00 | 0.00 | 0.00 | 4.34 |
2278 | 2788 | 6.873605 | GCAGGCAGTACTTGGAAATTAAAAAT | 59.126 | 34.615 | 0.00 | 0.00 | 0.00 | 1.82 |
2333 | 2843 | 5.654650 | TGAGTTTTGTTAAGAGGGAGCAAAA | 59.345 | 36.000 | 0.00 | 0.00 | 36.90 | 2.44 |
2344 | 2854 | 7.864379 | AGTGCATCAAATCTGAGTTTTGTTAAG | 59.136 | 33.333 | 13.80 | 5.94 | 35.90 | 1.85 |
2541 | 3055 | 4.458989 | GTCCATGTATTTGCCAAGAGTTCA | 59.541 | 41.667 | 0.00 | 0.00 | 0.00 | 3.18 |
2545 | 3059 | 4.012374 | AGTGTCCATGTATTTGCCAAGAG | 58.988 | 43.478 | 0.00 | 0.00 | 0.00 | 2.85 |
2598 | 3141 | 9.434420 | CAGGGAACAATATATTGCAAAAAGAAA | 57.566 | 29.630 | 22.66 | 0.00 | 41.38 | 2.52 |
2599 | 3142 | 8.592809 | ACAGGGAACAATATATTGCAAAAAGAA | 58.407 | 29.630 | 22.66 | 0.00 | 41.38 | 2.52 |
2600 | 3143 | 8.133024 | ACAGGGAACAATATATTGCAAAAAGA | 57.867 | 30.769 | 22.66 | 0.00 | 41.38 | 2.52 |
2601 | 3144 | 8.658609 | CAACAGGGAACAATATATTGCAAAAAG | 58.341 | 33.333 | 22.66 | 12.72 | 41.38 | 2.27 |
2602 | 3145 | 7.605691 | CCAACAGGGAACAATATATTGCAAAAA | 59.394 | 33.333 | 22.66 | 0.00 | 39.19 | 1.94 |
2603 | 3146 | 7.102346 | CCAACAGGGAACAATATATTGCAAAA | 58.898 | 34.615 | 22.66 | 0.00 | 39.19 | 2.44 |
2604 | 3147 | 6.638610 | CCAACAGGGAACAATATATTGCAAA | 58.361 | 36.000 | 22.66 | 0.00 | 39.19 | 3.68 |
2605 | 3148 | 5.395103 | GCCAACAGGGAACAATATATTGCAA | 60.395 | 40.000 | 22.66 | 0.00 | 39.19 | 4.08 |
2606 | 3149 | 4.099266 | GCCAACAGGGAACAATATATTGCA | 59.901 | 41.667 | 22.66 | 0.00 | 39.19 | 4.08 |
2607 | 3150 | 4.342092 | AGCCAACAGGGAACAATATATTGC | 59.658 | 41.667 | 22.66 | 9.43 | 39.19 | 3.56 |
2608 | 3151 | 6.545666 | TGTAGCCAACAGGGAACAATATATTG | 59.454 | 38.462 | 21.42 | 21.42 | 40.58 | 1.90 |
2609 | 3152 | 6.546034 | GTGTAGCCAACAGGGAACAATATATT | 59.454 | 38.462 | 0.00 | 0.00 | 39.29 | 1.28 |
2610 | 3153 | 6.062095 | GTGTAGCCAACAGGGAACAATATAT | 58.938 | 40.000 | 0.00 | 0.00 | 39.29 | 0.86 |
2611 | 3154 | 5.190925 | AGTGTAGCCAACAGGGAACAATATA | 59.809 | 40.000 | 0.00 | 0.00 | 39.29 | 0.86 |
2679 | 3222 | 8.233190 | CACTGATTAGGTGAAAATTCTGACTTC | 58.767 | 37.037 | 0.00 | 0.00 | 36.89 | 3.01 |
2846 | 3391 | 1.541233 | CGTGCATCTAAGGGTGGGATC | 60.541 | 57.143 | 0.00 | 0.00 | 0.00 | 3.36 |
2868 | 3413 | 0.867746 | CTGTTGTAGCGTGTGCACAT | 59.132 | 50.000 | 24.69 | 9.98 | 46.23 | 3.21 |
2878 | 3423 | 3.198872 | GCATAAGGACCTCTGTTGTAGC | 58.801 | 50.000 | 0.00 | 0.00 | 0.00 | 3.58 |
2884 | 3429 | 4.521146 | CTTGATTGCATAAGGACCTCTGT | 58.479 | 43.478 | 0.00 | 0.00 | 0.00 | 3.41 |
2885 | 3430 | 3.314635 | GCTTGATTGCATAAGGACCTCTG | 59.685 | 47.826 | 0.00 | 0.00 | 0.00 | 3.35 |
2886 | 3431 | 3.054139 | TGCTTGATTGCATAAGGACCTCT | 60.054 | 43.478 | 0.00 | 0.00 | 38.12 | 3.69 |
2927 | 3472 | 4.023193 | CCACTTTCCTGGTACATGTGTTTC | 60.023 | 45.833 | 9.11 | 0.00 | 38.20 | 2.78 |
2947 | 3492 | 8.494016 | AAAGCTACTATACAGTGAAATTCCAC | 57.506 | 34.615 | 0.00 | 0.00 | 36.14 | 4.02 |
2958 | 3503 | 9.530633 | ACGGAAAAAGATAAAGCTACTATACAG | 57.469 | 33.333 | 0.00 | 0.00 | 0.00 | 2.74 |
2982 | 3529 | 6.912203 | AAAGAAACCCAAAATAAACCAACG | 57.088 | 33.333 | 0.00 | 0.00 | 0.00 | 4.10 |
2983 | 3530 | 7.337184 | TGGAAAAGAAACCCAAAATAAACCAAC | 59.663 | 33.333 | 0.00 | 0.00 | 0.00 | 3.77 |
3026 | 3573 | 6.913170 | TCTATGCATGGAGAAACAGAAAAAC | 58.087 | 36.000 | 8.93 | 0.00 | 0.00 | 2.43 |
3172 | 3735 | 2.754472 | GTGTACACACTGCATCTCACA | 58.246 | 47.619 | 21.14 | 0.00 | 43.25 | 3.58 |
3187 | 3750 | 7.118101 | AGCTCTACTAATAGTATGAGCGTGTAC | 59.882 | 40.741 | 26.71 | 13.25 | 45.63 | 2.90 |
3241 | 3804 | 3.370633 | GGGGAGGAAGAATCAAGTACCAC | 60.371 | 52.174 | 0.00 | 0.00 | 0.00 | 4.16 |
3273 | 3836 | 6.525628 | CACAATTAGCAGACAAAACAGCATAG | 59.474 | 38.462 | 0.00 | 0.00 | 0.00 | 2.23 |
3274 | 3837 | 6.380995 | CACAATTAGCAGACAAAACAGCATA | 58.619 | 36.000 | 0.00 | 0.00 | 0.00 | 3.14 |
3517 | 4452 | 3.733443 | AAAATGTCAAGACCAGGCAAC | 57.267 | 42.857 | 0.00 | 0.00 | 0.00 | 4.17 |
3575 | 4514 | 6.367969 | CCGTGATTACATGGGTATAGTTTAGC | 59.632 | 42.308 | 0.00 | 0.00 | 46.26 | 3.09 |
3639 | 4584 | 3.323115 | TGCCAATGCCTTGTGATAAAACA | 59.677 | 39.130 | 0.91 | 0.00 | 36.33 | 2.83 |
3642 | 4587 | 3.514706 | ACATGCCAATGCCTTGTGATAAA | 59.485 | 39.130 | 0.91 | 0.00 | 37.29 | 1.40 |
3868 | 4815 | 4.703575 | CGTCTTATATTATGGGACGGAGGA | 59.296 | 45.833 | 17.59 | 0.00 | 43.69 | 3.71 |
3932 | 4879 | 4.046231 | TCCCTCCGTCCCATAATATAAGGA | 59.954 | 45.833 | 0.00 | 0.00 | 0.00 | 3.36 |
3933 | 4880 | 4.359105 | TCCCTCCGTCCCATAATATAAGG | 58.641 | 47.826 | 0.00 | 0.00 | 0.00 | 2.69 |
3990 | 4937 | 0.898320 | GCTGCCAGTAACTCCTGAGA | 59.102 | 55.000 | 0.22 | 0.00 | 34.23 | 3.27 |
3995 | 4942 | 0.678048 | CCCTTGCTGCCAGTAACTCC | 60.678 | 60.000 | 0.00 | 0.00 | 0.00 | 3.85 |
4025 | 4973 | 5.095490 | GCAAAAGAGTAATCGGAATTGGTG | 58.905 | 41.667 | 0.00 | 0.00 | 0.00 | 4.17 |
4051 | 4999 | 0.399454 | CGGAGATCTCATGGGGCAAT | 59.601 | 55.000 | 23.85 | 0.00 | 0.00 | 3.56 |
4180 | 5128 | 9.821662 | ATAAAAAGTGCAAGACGAATAAGTTAC | 57.178 | 29.630 | 0.00 | 0.00 | 0.00 | 2.50 |
4431 | 5379 | 9.113797 | ACCAGTGTCTAGATATAGATACCTACA | 57.886 | 37.037 | 17.55 | 1.28 | 38.47 | 2.74 |
4755 | 5703 | 4.083802 | TGACATGCATAGTCTAGACGATCG | 60.084 | 45.833 | 17.07 | 14.88 | 36.94 | 3.69 |
4803 | 5751 | 3.507233 | CACTTTGCAGGCATTAGGAGAAA | 59.493 | 43.478 | 0.00 | 0.00 | 0.00 | 2.52 |
4858 | 5806 | 7.119699 | CAGTTTCCTCTGACAAATAGCAATACA | 59.880 | 37.037 | 0.00 | 0.00 | 37.61 | 2.29 |
4878 | 5827 | 4.201724 | CGGGTTCTCAAATCGATCAGTTTC | 60.202 | 45.833 | 0.00 | 0.00 | 0.00 | 2.78 |
4885 | 5834 | 1.482593 | AGAGCGGGTTCTCAAATCGAT | 59.517 | 47.619 | 0.00 | 0.00 | 35.59 | 3.59 |
4887 | 5836 | 1.281899 | GAGAGCGGGTTCTCAAATCG | 58.718 | 55.000 | 7.55 | 0.00 | 42.53 | 3.34 |
4895 | 5844 | 1.157585 | GTTGAAAGGAGAGCGGGTTC | 58.842 | 55.000 | 0.00 | 0.00 | 0.00 | 3.62 |
4896 | 5845 | 0.472471 | TGTTGAAAGGAGAGCGGGTT | 59.528 | 50.000 | 0.00 | 0.00 | 0.00 | 4.11 |
4912 | 5861 | 6.239036 | GGTGCAAAGGAATCTAAAGAGTTGTT | 60.239 | 38.462 | 0.00 | 0.00 | 0.00 | 2.83 |
5040 | 5989 | 3.555547 | AGGAAACAAAGTTTCAATTGCGC | 59.444 | 39.130 | 20.30 | 0.00 | 0.00 | 6.09 |
5260 | 6212 | 4.226427 | TGCAGAAGAGGCAGTAATCATT | 57.774 | 40.909 | 0.00 | 0.00 | 36.11 | 2.57 |
5276 | 6228 | 0.467844 | TGCCCAAGAAAAGCTGCAGA | 60.468 | 50.000 | 20.43 | 0.00 | 0.00 | 4.26 |
5277 | 6229 | 0.606604 | ATGCCCAAGAAAAGCTGCAG | 59.393 | 50.000 | 10.11 | 10.11 | 31.53 | 4.41 |
5402 | 6358 | 4.198028 | TCACTCTGATCAACATGTCAGG | 57.802 | 45.455 | 11.22 | 6.04 | 41.64 | 3.86 |
5454 | 6410 | 3.055819 | TGAGCCCAAGATACTCACTCAAC | 60.056 | 47.826 | 0.00 | 0.00 | 35.58 | 3.18 |
5455 | 6411 | 3.173151 | TGAGCCCAAGATACTCACTCAA | 58.827 | 45.455 | 0.00 | 0.00 | 35.58 | 3.02 |
5457 | 6413 | 2.482839 | GCTGAGCCCAAGATACTCACTC | 60.483 | 54.545 | 0.00 | 0.00 | 35.58 | 3.51 |
5458 | 6414 | 1.484240 | GCTGAGCCCAAGATACTCACT | 59.516 | 52.381 | 0.00 | 0.00 | 35.58 | 3.41 |
5459 | 6415 | 1.484240 | AGCTGAGCCCAAGATACTCAC | 59.516 | 52.381 | 0.00 | 0.00 | 35.58 | 3.51 |
5507 | 6463 | 6.272822 | AGAATCTTTTGAACATTGTAGCCC | 57.727 | 37.500 | 0.00 | 0.00 | 0.00 | 5.19 |
5533 | 6489 | 1.442769 | CCTGCAACGTGATGCTAACT | 58.557 | 50.000 | 13.05 | 0.00 | 46.54 | 2.24 |
5581 | 6537 | 7.553044 | AGTTAGCCTTTTGTCCACTAATATCAC | 59.447 | 37.037 | 0.00 | 0.00 | 0.00 | 3.06 |
5850 | 8506 | 1.059098 | TATGAGATCTGCCCGGCATT | 58.941 | 50.000 | 13.86 | 3.32 | 38.13 | 3.56 |
5949 | 8605 | 1.940883 | TAGACGCACTTACCGGCAGG | 61.941 | 60.000 | 0.00 | 0.00 | 45.13 | 4.85 |
6006 | 8662 | 3.377172 | GCTATGCCGTTTATGTCCAGTTT | 59.623 | 43.478 | 0.00 | 0.00 | 0.00 | 2.66 |
6018 | 8674 | 0.037590 | TTCAAGGGTGCTATGCCGTT | 59.962 | 50.000 | 0.00 | 0.00 | 34.82 | 4.44 |
6046 | 8702 | 6.704493 | TCACAGAGTACAAGTGGTTCATTAAC | 59.296 | 38.462 | 10.98 | 0.00 | 34.17 | 2.01 |
6066 | 8722 | 0.040351 | TGGGAGAGAGGTCCTCACAG | 59.960 | 60.000 | 21.26 | 0.00 | 44.40 | 3.66 |
6067 | 8723 | 0.712979 | ATGGGAGAGAGGTCCTCACA | 59.287 | 55.000 | 21.26 | 11.29 | 46.73 | 3.58 |
6068 | 8724 | 1.872773 | AATGGGAGAGAGGTCCTCAC | 58.127 | 55.000 | 21.26 | 14.78 | 44.40 | 3.51 |
6097 | 8753 | 1.003355 | ATGAGACCAACGGGCACTG | 60.003 | 57.895 | 0.00 | 0.00 | 42.99 | 3.66 |
6103 | 8759 | 1.021390 | GCAGACCATGAGACCAACGG | 61.021 | 60.000 | 0.00 | 0.00 | 0.00 | 4.44 |
6105 | 8761 | 1.160137 | GTGCAGACCATGAGACCAAC | 58.840 | 55.000 | 0.00 | 0.00 | 0.00 | 3.77 |
6109 | 8765 | 3.550437 | ATAAGGTGCAGACCATGAGAC | 57.450 | 47.619 | 0.00 | 0.00 | 45.98 | 3.36 |
6110 | 8766 | 3.877559 | CAATAAGGTGCAGACCATGAGA | 58.122 | 45.455 | 0.00 | 0.00 | 45.98 | 3.27 |
6111 | 8767 | 2.357009 | GCAATAAGGTGCAGACCATGAG | 59.643 | 50.000 | 0.00 | 0.00 | 45.98 | 2.90 |
6112 | 8768 | 2.368439 | GCAATAAGGTGCAGACCATGA | 58.632 | 47.619 | 0.00 | 0.00 | 45.98 | 3.07 |
6113 | 8769 | 2.857592 | GCAATAAGGTGCAGACCATG | 57.142 | 50.000 | 0.00 | 0.00 | 45.98 | 3.66 |
6145 | 8801 | 3.437213 | ACATCCCATTGGCATATCATGG | 58.563 | 45.455 | 8.65 | 8.65 | 0.00 | 3.66 |
6235 | 8891 | 2.936919 | TCAGTGAGCAACAACCATCT | 57.063 | 45.000 | 0.00 | 0.00 | 0.00 | 2.90 |
6317 | 8973 | 9.125026 | CCAGCCTAACATTCTATAATTCAGTTT | 57.875 | 33.333 | 0.00 | 0.00 | 0.00 | 2.66 |
6320 | 8976 | 8.944029 | CATCCAGCCTAACATTCTATAATTCAG | 58.056 | 37.037 | 0.00 | 0.00 | 0.00 | 3.02 |
6327 | 8983 | 4.660303 | TCCACATCCAGCCTAACATTCTAT | 59.340 | 41.667 | 0.00 | 0.00 | 0.00 | 1.98 |
6361 | 9017 | 4.571580 | CAGGTTTTGCAGCAGAAATGAAAA | 59.428 | 37.500 | 0.00 | 0.00 | 0.00 | 2.29 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.